BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|255764462|ref|YP_003064709.2| methionyl-tRNA
formyltransferase [Candidatus Liberibacter asiaticus str. psy62]
(310 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|227820645|ref|YP_002824615.1| methionyl-tRNA formyltransferase [Sinorhizobium fredii NGR234]
gi|254789364|sp|C3MF25|FMT_RHISN RecName: Full=Methionyl-tRNA formyltransferase
gi|227339644|gb|ACP23862.1| methionyl-tRNA formyltransferase [Sinorhizobium fredii NGR234]
Length = 311
Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats.
Identities = 172/310 (55%), Positives = 210/310 (67%), Gaps = 1/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++FMGT EF+V TL ALV + H I +VYTQPPRP GRRGL S VH+ A+ +
Sbjct: 1 MPLRIIFMGTPEFSVPTLAALVEAGHEIAAVYTQPPRPGGRRGLDLQKSPVHQAAELLGV 60
Query: 61 PALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P + + F FNADVAVVVAYGL++P+ IL+ T+ G YNGHASLLPRWRGA
Sbjct: 61 PVLTPVNFKDAADRQAFRDFNADVAVVVAYGLLLPEEILSGTRYGCYNGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD ETG+ +MKMDK LDTGPVA + VPI + L +L A M
Sbjct: 121 APIQRAIMAGDRETGMMVMKMDKGLDTGPVALTKTVPIGETMTAGELHDKLMHAGAALMK 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EAM KLE LPL+PQ + G+ YA KISK ETR++F + A +VHNHIR L+PFPGAW E+
Sbjct: 181 EAMVKLELGELPLTPQPQEGVLYAAKISKDETRIDFTKPAADVHNHIRGLAPFPGAWFEL 240
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ ERIK+L S+ G G PG +++ TIAC GAVR RLQRAGG+ L DFL
Sbjct: 241 ETAGRTERIKVLGSEPAAGAGAPGTILDDALTIACGDGAVRPTRLQRAGGKPLATPDFLR 300
Query: 300 GCPVIIGCIV 309
G P+ G +
Sbjct: 301 GSPIAAGTRI 310
>gi|116250202|ref|YP_766040.1| methionyl-tRNA formyltransferase [Rhizobium leguminosarum bv.
viciae 3841]
gi|115254850|emb|CAK05924.1| putative methionyl-tRNA formyltransferase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 319
Score = 222 bits (564), Expect = 8e-56, Method: Composition-based stats.
Identities = 170/310 (54%), Positives = 214/310 (69%), Gaps = 1/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+LR++FMGT EF+V TL+ LV + H IV+VYTQPPRP GRRGL S VH+ A+ L
Sbjct: 9 MSLRIIFMGTPEFSVPTLRLLVDAGHRIVAVYTQPPRPGGRRGLDLQKSPVHQAAELLGL 68
Query: 61 PALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P E + DV VVVAYGL++P+ ILN T+ G YNGHASLLPRWRGA
Sbjct: 69 PVFTPVNFKDPEERERFRGLNADVGVVVAYGLLLPEAILNGTRDGCYNGHASLLPRWRGA 128
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD +TG+ +MKMDK LDTG VA R+V I N+ L L ++ A AM
Sbjct: 129 APIQRAIMAGDAKTGMMVMKMDKGLDTGAVALTREVEIGPNMTAGELHDRLMLVGAKAMA 188
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EAM KLE N+LPL+PQ E+G+ YA KI K ETR++F R A +VHNHIR L+PFPGAW E+
Sbjct: 189 EAMVKLEMNDLPLTPQPEDGVLYAAKIDKAETRIDFSRDAGDVHNHIRGLAPFPGAWFEL 248
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
IG K ER+K+L S+ EG+G G+++ + +AC GAVR+ RLQ+AGG+ L DFL
Sbjct: 249 EIGGKPERVKVLASEPAEGQGVAGQLLTDDLVVACGSGAVRLTRLQKAGGKPLAAADFLR 308
Query: 300 GCPVIIGCIV 309
G P+ G +
Sbjct: 309 GTPLAAGTRL 318
>gi|241202829|ref|YP_002973925.1| methionyl-tRNA formyltransferase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240856719|gb|ACS54386.1| methionyl-tRNA formyltransferase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 311
Score = 221 bits (563), Expect = 1e-55, Method: Composition-based stats.
Identities = 171/310 (55%), Positives = 215/310 (69%), Gaps = 1/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+LR++FMGT EF+V TL+ LV + H IV+VYTQPPRP GRRGL S VH+ A+ L
Sbjct: 1 MSLRIIFMGTPEFSVPTLRLLVDAGHRIVAVYTQPPRPGGRRGLDLQKSPVHQAAELLGL 60
Query: 61 PALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P E + DV VVVAYGL++P+ ILN T+ G YNGHASLLPRWRGA
Sbjct: 61 PVFTPVNFKDPEERERFRGLNADVGVVVAYGLLLPEAILNGTRDGCYNGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD +TG+ +MKMDK LDTG VA R+V I N+ L L ++ A AM
Sbjct: 121 APIQRAIMAGDAKTGMMVMKMDKGLDTGAVALTREVEIGPNMTAGELHDRLMLVGAKAMA 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EAM KLE N+LPL+PQ E+G+ YA KI K ETR++F R+A +VHNHIR L+PFPGAW E+
Sbjct: 181 EAMVKLEMNDLPLTPQPEDGVLYAAKIDKAETRIDFSRNAGDVHNHIRGLAPFPGAWFEL 240
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
IG K ER+K+L S+L EG+G G ++ + IAC GA+R+ RLQ+AGG+ L DFL
Sbjct: 241 EIGGKPERVKVLASELAEGQGAAGLLLTDDLVIACGSGALRLTRLQKAGGKPLAAADFLR 300
Query: 300 GCPVIIGCIV 309
G P+ G +
Sbjct: 301 GTPLAAGTRL 310
>gi|222084709|ref|YP_002543238.1| methionyl-tRNA formyltransferase [Agrobacterium radiobacter K84]
gi|254789330|sp|B9J8C6|FMT_AGRRK RecName: Full=Methionyl-tRNA formyltransferase
gi|221722157|gb|ACM25313.1| methionyl-tRNA formyltransferase [Agrobacterium radiobacter K84]
Length = 315
Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats.
Identities = 175/310 (56%), Positives = 218/310 (70%), Gaps = 1/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+L ++FMGT EF+V TL++L+ + H I +VYTQPPRP GRRGL S VH+ A+ L
Sbjct: 1 MSLSIIFMGTPEFSVPTLRSLIDAGHKIRAVYTQPPRPGGRRGLDLQKSPVHQAAELLGL 60
Query: 61 PALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P QEE ++F +ADVAVVVAYGL++P+ IL T+LG YNGHASLLPRWRGA
Sbjct: 61 PVFTPVNFKDQEERQRFRELDADVAVVVAYGLLLPEAILTGTRLGCYNGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD +TG+ +MKMDK LDTGPVA R+V I + L +L A AM
Sbjct: 121 APIQRAIMAGDKKTGMMVMKMDKGLDTGPVALTREVEIGGTMTAGELHDKLMQAGAKAMA 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EAM+KLE N LPL+ Q G+ YA KI KGETR++F + A +VHNHIR LSPFPGAW EM
Sbjct: 181 EAMNKLEYNELPLTEQPAEGVVYAAKIDKGETRIDFSKPAADVHNHIRGLSPFPGAWFEM 240
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
I K ER+K+L S+L EGE GEV++ + IAC GAVR+ +LQ+AGG+ + DFL
Sbjct: 241 EIAGKPERVKVLGSELAEGERAVGEVLSDDLAIACGSGAVRLTKLQKAGGKPMAAADFLR 300
Query: 300 GCPVIIGCIV 309
G PV G I+
Sbjct: 301 GTPVAAGTIL 310
>gi|255764462|ref|YP_003064709.2| methionyl-tRNA formyltransferase [Candidatus Liberibacter asiaticus
str. psy62]
gi|254547813|gb|ACT56769.2| methionyl-tRNA formyltransferase [Candidatus Liberibacter asiaticus
str. psy62]
Length = 310
Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats.
Identities = 310/310 (100%), Positives = 310/310 (100%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL
Sbjct: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA
Sbjct: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE
Sbjct: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM
Sbjct: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG
Sbjct: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
Query: 301 CPVIIGCIVG 310
CPVIIGCIVG
Sbjct: 301 CPVIIGCIVG 310
>gi|150395283|ref|YP_001325750.1| methionyl-tRNA formyltransferase [Sinorhizobium medicae WSM419]
gi|166215515|sp|A6U5I5|FMT_SINMW RecName: Full=Methionyl-tRNA formyltransferase
gi|150026798|gb|ABR58915.1| methionyl-tRNA formyltransferase [Sinorhizobium medicae WSM419]
Length = 311
Score = 219 bits (558), Expect = 4e-55, Method: Composition-based stats.
Identities = 173/304 (56%), Positives = 214/304 (70%), Gaps = 1/304 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++FMGT EF+V TL AL + H I +VYTQPPRP GRRGL S VH+ A+ +
Sbjct: 1 MPLRIIFMGTPEFSVPTLLALAGAGHEIAAVYTQPPRPGGRRGLDLQKSPVHQAAERLDI 60
Query: 61 PALVPTKLGQE-EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P + + F +F AD AVVVAYGL++P+ IL+ T+ G YNGHASLLPRWRGA
Sbjct: 61 PVLTPVNFKEAADRRTFRNFGADAAVVVAYGLLLPEEILSGTRCGCYNGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD ETG+ +MKMDK LDTGPVA R VPI + + L LS + A M
Sbjct: 121 APIQRAIMAGDRETGMMVMKMDKGLDTGPVALARSVPIHATMTAGELHDRLSEVGAKLMT 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EAM +LE LPL+PQ + G+ YA KISK ETR++F R A VHNHIR LSPFPGAW E+
Sbjct: 181 EAMARLEAGELPLTPQPQEGVVYAAKISKEETRIDFSRPAAEVHNHIRGLSPFPGAWFEL 240
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
I + ERIK+L S++ +GEG PG+V++ + IAC +GAVR+ RLQRAGG+ L DFL
Sbjct: 241 DIAGRRERIKVLGSEISQGEGAPGQVLDGSLAIACGEGAVRLTRLQRAGGKALPAADFLR 300
Query: 300 GCPV 303
G P+
Sbjct: 301 GTPI 304
>gi|15964173|ref|NP_384526.1| methionyl-tRNA formyltransferase [Sinorhizobium meliloti 1021]
gi|307301318|ref|ZP_07581080.1| methionyl-tRNA formyltransferase [Sinorhizobium meliloti BL225C]
gi|21542050|sp|Q92SH5|FMT_RHIME RecName: Full=Methionyl-tRNA formyltransferase
gi|15073349|emb|CAC41857.1| Probable methionyl-tRNA formyltransferase [Sinorhizobium meliloti
1021]
gi|306903774|gb|EFN34361.1| methionyl-tRNA formyltransferase [Sinorhizobium meliloti BL225C]
Length = 311
Score = 218 bits (555), Expect = 9e-55, Method: Composition-based stats.
Identities = 174/310 (56%), Positives = 213/310 (68%), Gaps = 1/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++FMGT EF+V TL AL + H I +VYTQPPRP GRRGL S VH+ A+ +
Sbjct: 1 MPLRMIFMGTPEFSVPTLLALAGAGHEIAAVYTQPPRPGGRRGLDLQKSPVHQAAERLGI 60
Query: 61 PALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P + + F F ADVAVVVAYGL++P+ IL+ T+ G YNGHASLLPRWRGA
Sbjct: 61 PVLTPANFKDAADRQTFRDFGADVAVVVAYGLLLPEEILSGTRYGCYNGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD ETG+ +MKMDK LDTGPVA + VPI + L L + A M
Sbjct: 121 APIQRAIMAGDRETGMMVMKMDKGLDTGPVALAQSVPIDGMMRAGELHDRLMQVGAVLMT 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EAM +LE LPL+PQ + G+ YA KISK ETR++F R A VHNHIR LSPFPGAW E+
Sbjct: 181 EAMARLESGELPLAPQAQEGVAYAAKISKEETRIDFSRPAAEVHNHIRGLSPFPGAWFEL 240
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
I + ER+K+L S++ EGEG PGEV++ IAC +GAVR+ RLQRAGG+ L DFL
Sbjct: 241 DIAGRRERVKVLASEMSEGEGDPGEVLDHTLGIACGEGAVRLTRLQRAGGKALAAADFLR 300
Query: 300 GCPVIIGCIV 309
G P+ G +
Sbjct: 301 GTPIAAGARI 310
>gi|209547670|ref|YP_002279587.1| methionyl-tRNA formyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|238066639|sp|B5ZN20|FMT_RHILW RecName: Full=Methionyl-tRNA formyltransferase
gi|209533426|gb|ACI53361.1| methionyl-tRNA formyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 311
Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 176/310 (56%), Positives = 220/310 (70%), Gaps = 1/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+L ++FMGT EF+V TL+ LV + H IV+VYTQPPRP GRRGL S VH+ A+ L
Sbjct: 1 MSLSIIFMGTPEFSVPTLRLLVDAGHRIVAVYTQPPRPGGRRGLDLQKSPVHQAAELLGL 60
Query: 61 PALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P EE E+F + ADVAVVVAYGL++P+ +LN T+ G YNGHASLLPRWRGA
Sbjct: 61 PVFTPVNFKDPEERERFAALKADVAVVVAYGLLLPEAVLNGTRDGCYNGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD ETG+ +MKMDK LDTG VA RKV I N+ L L + A AM
Sbjct: 121 APIQRAIMAGDAETGMMVMKMDKGLDTGAVALTRKVEIGPNMTAGELHDRLMQVGAKAMA 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EAM KLE N+LPL+PQ ++G+ YA KI K ETR++F R A +VHNHIR L+PFPGAW E+
Sbjct: 181 EAMVKLEMNDLPLTPQPQDGVLYAAKIDKAETRIDFARPALDVHNHIRGLAPFPGAWFEL 240
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
IG K ER+K+L S+L EG+G GE++ + +AC+ GAVR+ RLQ+AGG+ L DFL
Sbjct: 241 EIGGKPERVKVLGSELAEGQGAAGELLTDDLVVACASGAVRLTRLQKAGGKPLAAADFLR 300
Query: 300 GCPVIIGCIV 309
G P+ G +
Sbjct: 301 GTPLAAGMRL 310
>gi|163757846|ref|ZP_02164935.1| methionyl-tRNA formyltransferase [Hoeflea phototrophica DFL-43]
gi|162285348|gb|EDQ35630.1| methionyl-tRNA formyltransferase [Hoeflea phototrophica DFL-43]
Length = 314
Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats.
Identities = 169/314 (53%), Positives = 222/314 (70%), Gaps = 4/314 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++FMGT +AV TLQAL + H IV+VY+QPPRPAGRRGL+ S VH+ A+ +
Sbjct: 1 MPLRIIFMGTPAYAVPTLQALHEAGHEIVAVYSQPPRPAGRRGLELKPSPVHEAAEGLGI 60
Query: 61 PALVPTKLGQEEYE-QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P L +E + F + AD AVVVAYGL++P+ +L+A +LG +NGHASLLPRWRGA
Sbjct: 61 PVFTPKSLKSDEEQAAFKALEADAAVVVAYGLLLPKPVLDAPRLGAWNGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD TG+ IM+MD LDTGPVA + V IS+++ T L L+ + A M
Sbjct: 121 APIQRAIMAGDTTTGVMIMQMDVGLDTGPVALTQTVDISASMTTGELHDTLAGVTAKLMT 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+AM +LE+ LP+ Q E G++YA KISK ETRV+F R+A +VHNHIR L+P PGAW E+
Sbjct: 181 DAMARLERGELPVRVQPEQGVSYAAKISKEETRVDFTRTALDVHNHIRGLAPAPGAWFEL 240
Query: 240 MIGNKHERIKLLESQLVEGEGK---PGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
G++ ER+KLL S +V G + PG V++ TIAC +GAVR++RLQ+AGG+ L D
Sbjct: 241 QTGDRAERVKLLASGVVAGGAQGEVPGTVLDEQLTIACGEGAVRLLRLQKAGGKPLSAQD 300
Query: 297 FLLGCPVIIGCIVG 310
FL G PV G ++G
Sbjct: 301 FLRGTPVAPGAVIG 314
>gi|325291801|ref|YP_004277665.1| methionyl-tRNA formyltransferase [Agrobacterium sp. H13-3]
gi|325059654|gb|ADY63345.1| Methionyl-tRNA formyltransferase [Agrobacterium sp. H13-3]
Length = 311
Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats.
Identities = 182/311 (58%), Positives = 222/311 (71%), Gaps = 1/311 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++FMGT +F+V TL+ALV + H +V+VYTQPPRP GRRGL S VH+ A+ L
Sbjct: 1 MALRIIFMGTPDFSVPTLRALVDAGHEVVAVYTQPPRPGGRRGLDLQKSPVHQAAELLGL 60
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P +E+ +QF FNADVAVVVAYGL++P+ IL+ T+LG YNGHASLLPRWRGA
Sbjct: 61 PVLTPVNFKAEEDRQQFREFNADVAVVVAYGLLLPEAILSGTRLGCYNGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD ETG+ +MKM+K LDTGPVA KV I N L L + A M
Sbjct: 121 APIQRAIMAGDAETGMMVMKMEKGLDTGPVALTAKVTIDENTTAGELHDSLMLTGARLMR 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+AMDKLE ++LPL Q E G+ YA KI KGETR+NF R A++VHNHIR LSPFPGAWLEM
Sbjct: 181 QAMDKLEADDLPLVAQPEEGVVYASKIDKGETRINFSRPAQDVHNHIRGLSPFPGAWLEM 240
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
IG K ER+K+L S+L G G+ G V++ TIAC GAVR+ RLQ+AGG+ L DF+
Sbjct: 241 EIGGKAERVKVLASELASGMGEAGAVLDEALTIACGSGAVRLTRLQKAGGKPLSAADFVR 300
Query: 300 GCPVIIGCIVG 310
G PV +G
Sbjct: 301 GTPVPARTRLG 311
>gi|190890087|ref|YP_001976629.1| methionyl-tRNA formyltransferase [Rhizobium etli CIAT 652]
gi|238692547|sp|B3PZF7|FMT_RHIE6 RecName: Full=Methionyl-tRNA formyltransferase
gi|190695366|gb|ACE89451.1| methionyl-tRNA formyltransferase protein [Rhizobium etli CIAT 652]
Length = 311
Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats.
Identities = 174/310 (56%), Positives = 221/310 (71%), Gaps = 1/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+L ++FMGT EF+V TL+ LV + H IV+VYTQPPRP GRRGL S VH+ A+ L
Sbjct: 1 MSLSIIFMGTPEFSVPTLRLLVDAGHRIVAVYTQPPRPGGRRGLDLQKSPVHQAAELLGL 60
Query: 61 PALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P E E+F +F ADVAVVVAYGL++P+ ILN T+ G YNGHASLLPRWRGA
Sbjct: 61 PVFTPVNFKDAGERERFAAFKADVAVVVAYGLLLPEAILNGTRDGCYNGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD++TG+ +MKMDK LDTG VA R+V I N+ L L + A AM
Sbjct: 121 APIQRAIMAGDDKTGMMVMKMDKGLDTGAVALSREVEIGPNMTAGELHDRLMQVGAKAMA 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EAM KLE N+LPL+PQ ++G+ YA KI K ETR++F R A +VHNHIR L+PFPGAW E+
Sbjct: 181 EAMVKLEMNDLPLTPQRQDGVLYAAKIDKAETRIDFARPARDVHNHIRGLAPFPGAWFEL 240
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
IG K ER+K+L S+L EG+G G+++ + +AC+ GAVR+ RLQ+AGG+ L DFL
Sbjct: 241 EIGGKPERVKVLGSELAEGQGVAGQLLTDDLVVACASGAVRLTRLQKAGGKPLAASDFLR 300
Query: 300 GCPVIIGCIV 309
G P+ G +
Sbjct: 301 GTPLAAGTRL 310
>gi|86356071|ref|YP_467963.1| methionyl-tRNA formyltransferase [Rhizobium etli CFN 42]
gi|123724851|sp|Q2KD50|FMT_RHIEC RecName: Full=Methionyl-tRNA formyltransferase
gi|86280173|gb|ABC89236.1| methionyl-tRNA formyltransferase protein [Rhizobium etli CFN 42]
Length = 311
Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats.
Identities = 173/310 (55%), Positives = 220/310 (70%), Gaps = 1/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+L ++FMGT EF+V TL+ L + H IV+VYTQPPRP GRRGL S VH+ A+ L
Sbjct: 1 MSLSIIFMGTPEFSVPTLRLLADAGHRIVAVYTQPPRPGGRRGLDLQKSPVHQAAELLGL 60
Query: 61 PALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P EE E+F +F ADVAVVVAYGL++P+ +LN T+ G YNGHASLLPRWRGA
Sbjct: 61 PVFTPVNFKDAEERERFAAFKADVAVVVAYGLLLPEAVLNGTRDGCYNGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD +TG+ +MKMDK LDTGPVA R+V I N+ L L + A AM
Sbjct: 121 APIQRAIMAGDEKTGMMVMKMDKGLDTGPVALSREVEIGPNMTAGELHDRLMQVGAKAMA 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EAM KLE N+LPL+PQ ++G+ YA KI K ETR++F R A +VHNHIR L+PFPGAW E+
Sbjct: 181 EAMVKLEMNDLPLTPQPQDGVLYAAKIDKAETRIDFGRDARDVHNHIRGLAPFPGAWFEL 240
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
IG K ER+K+L S+L EG+G G+++ + + C+ GAVR+ RLQ+AGG+ L DFL
Sbjct: 241 EIGGKPERVKVLGSELAEGQGTAGQLLTDDLLVGCASGAVRLTRLQKAGGKPLAAADFLR 300
Query: 300 GCPVIIGCIV 309
G P+ G +
Sbjct: 301 GTPLGAGTRL 310
>gi|296284448|ref|ZP_06862446.1| methionyl-tRNA formyltransferase [Citromicrobium bathyomarinum
JL354]
Length = 306
Score = 215 bits (546), Expect = 9e-54, Method: Composition-based stats.
Identities = 128/309 (41%), Positives = 180/309 (58%), Gaps = 5/309 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV TL+ALV ++H +V VYTQPPR AG RG K + VH+ A+ +
Sbjct: 1 MRIVFMGTPDFAVPTLEALVHAAHEVVCVYTQPPRKAG-RGKKLQPTPVHQAAERLGIEV 59
Query: 63 LVPTKLGQEEYEQ-FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L +E + F + +ADV VV AYGL++PQ +L+A G N HAS+LPRWRGAAP
Sbjct: 60 RHPASLKSQEEKDAFAALDADVGVVAAYGLILPQAVLDAPTHGCLNVHASILPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+AGD TG+ IM+M+ LDTGP+ + PI + A +
Sbjct: 120 IQRAILAGDTGTGVTIMQMEAGLDTGPMLATIRTPIDRKTAGDLTDELA---EKGAQLMI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
E + Q + T+A KI K E R+++ + A V +RA +P+PGA+ E
Sbjct: 177 GTLRELSKHIPVMQDDAEATHAPKIDKAEARLDWTQDAVQVERQVRAFAPWPGAFFEYEG 236
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+K L +++ EG G PG V++ T+AC GA+R+ R+QRAG +D DF G
Sbjct: 237 AEGMERVKTLAAEIAEGSGAPGTVLDDALTVACGSGALRLTRVQRAGKPAMDTADFQRGR 296
Query: 302 PVIIGCIVG 310
+ G +G
Sbjct: 297 AIGKGAKLG 305
>gi|291518518|emb|CBK73739.1| methionyl-tRNA formyltransferase [Butyrivibrio fibrisolvens 16/4]
Length = 311
Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats.
Identities = 105/311 (33%), Positives = 171/311 (54%), Gaps = 9/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +FAV TL+A+ + H ++ V +QP +P GR G K + V + A E +P
Sbjct: 1 MKVVFMGTPDFAVETLKAIYEAGHEVILVVSQPDKPKGRSG-KLAPTPVKEFAVEHDIPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ EE ++ + ADV VV A+G ++P+ IL+ ++G N H SLLP++RGAAP
Sbjct: 60 YQPVKIRAEESVEYLRKYEADVFVVAAFGQILPKVILDMPRIGCVNVHGSLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ +G M M LD G + +V +S + L +L++ V+
Sbjct: 120 IQWAVINGEKVSGNTTMLMGPGLDDGDMLLKSEVVLSEDETGGSLFDKLAIDGGKLAVKT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ LE+ + PQ E+ T+ I K V++ + A + IR L+P+P A+ +
Sbjct: 180 IEALERGEITPIPQDESQATHVGMIKKEMGLVDWTKPAAEIERLIRGLNPWPSAFTFI-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+++KL + +VE G+PG +I FT+AC +G++ I LQ G + + GDFL
Sbjct: 238 --DGKQLKLWKGTVVEKSGEPGTIIDVDKNGFTVACGKGSLVINELQLEGKKRMAAGDFL 295
Query: 299 LGCPVIIGCIV 309
G + G
Sbjct: 296 RGYSIETGKRF 306
>gi|27383219|ref|NP_774748.1| methionyl-tRNA formyltransferase [Bradyrhizobium japonicum USDA
110]
gi|33516861|sp|Q89BP0|FMT_BRAJA RecName: Full=Methionyl-tRNA formyltransferase
gi|27356393|dbj|BAC53373.1| methionyl-tRNA formyl transferase [Bradyrhizobium japonicum USDA
110]
Length = 311
Score = 214 bits (544), Expect = 2e-53, Method: Composition-based stats.
Identities = 152/310 (49%), Positives = 203/310 (65%), Gaps = 1/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++FMGT +F+V TL LV+ H IV+VYT+ P+P GRRGL+ + V + A+ +
Sbjct: 1 MPLRLIFMGTPDFSVPTLLELVAHGHEIVAVYTRAPKPGGRRGLQLQPTPVEEAARRLGV 60
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P +E E+F +F+AD AVVVAYG+++PQ IL+A KLG YN HASLLPRWRGA
Sbjct: 61 PVLTPKTLKTEEALEEFRAFDADAAVVVAYGMILPQAILDAPKLGCYNLHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API RAIMA D E+G+ +MKMD LDTG VA ++ I+ + A L LS L A MV
Sbjct: 121 APINRAIMADDAESGVMVMKMDVGLDTGDVAMAERLAITDTMTAADLHDRLSRLGADLMV 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
AM L++ L L Q E+G+TYA KI K E R+++ + A V HI LSPFPGAW E+
Sbjct: 181 RAMAALDRGGLQLKKQSEDGVTYAAKIDKAEARIDWTKPARAVLRHIHGLSPFPGAWAEL 240
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+++ R+K+L +L +G G PGEV++ TIAC +GA+RI+ LQR G + DFL
Sbjct: 241 AGVSENARVKILRCELAKGSGAPGEVLDDQLTIACGEGAIRIIELQREGKARMQATDFLR 300
Query: 300 GCPVIIGCIV 309
G P+ G
Sbjct: 301 GVPLKAGAKF 310
>gi|322421199|ref|YP_004200422.1| methionyl-tRNA formyltransferase [Geobacter sp. M18]
gi|320127586|gb|ADW15146.1| methionyl-tRNA formyltransferase [Geobacter sp. M18]
Length = 314
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 113/315 (35%), Positives = 176/315 (55%), Gaps = 10/315 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +R++FMGT EFA TL+ L+ ++V+V TQP RP G RG +++ V A+
Sbjct: 1 MTGMRIIFMGTPEFACPTLRTLIERGENVVAVVTQPDRPKG-RGQQTLPPPVKVVAEGHG 59
Query: 60 LPALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P K+ E EQ + D+ VVVA+G ++P+ +L K G N HASLLPR+RG
Sbjct: 60 IPVLQPVKVRLPESIEQIRALEPDLIVVVAFGQILPKALLEIPKHGCVNVHASLLPRYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+ I+ G+ ETG+ M MD LDTG + PI + +T L +S L A +
Sbjct: 120 AAPLNWCIINGETETGVTTMMMDVGLDTGDMLLKSATPIDPDEDTQSLHDRMSRLGAELL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ +D+L+ L Q ++ YA + K + +++ RSA+ + N +R ++P+PGA+
Sbjct: 180 AQTLDRLKAGELVPEKQDDSLTCYAAMMKKEDGLIDWTRSAQQIKNQVRGMTPWPGAFSF 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + +K+ + Q G G PGEV+ +AC +G++ I LQ G + + G
Sbjct: 240 LDD----KLLKVYKVQTASGSGAPGEVVAAGRDGIEVACGEGSLLIRELQLEGKKRMAAG 295
Query: 296 DFLLGCPVIIGCIVG 310
DFL G V G ++G
Sbjct: 296 DFLAGYKVQPGVLLG 310
>gi|299132602|ref|ZP_07025797.1| methionyl-tRNA formyltransferase [Afipia sp. 1NLS2]
gi|298592739|gb|EFI52939.1| methionyl-tRNA formyltransferase [Afipia sp. 1NLS2]
Length = 310
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 149/306 (48%), Positives = 197/306 (64%), Gaps = 2/306 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++FMGT +FAV TL+AL + H IV+VYT+ +PAG RG+K + V + A+E L
Sbjct: 1 MPLRLIFMGTPDFAVPTLRALHAHGHEIVAVYTRVAKPAG-RGMKLQPTPVEQAARELGL 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P+ E F + AD AVVVAYG+++P+ ILNA G +N HASLLPRWRGA
Sbjct: 60 PVLTPSTLKTPEAEATFRAHKADAAVVVAYGMILPENILNAVPRGCFNLHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIM GD E+G +MKMD LDTG VA ++PI+ + L L+ A MV
Sbjct: 120 APIQRAIMTGDAESGAMVMKMDAGLDTGDVAMTDRLPITDAMTAQDLHDALAPRGADLMV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+AM LEQ L L PQ E GITYA KI K E ++++ + A V HI LSPFPGAW E+
Sbjct: 180 QAMAALEQGGLDLVPQDEAGITYAAKIGKAEAKIDWAKPAHEVLRHIHGLSPFPGAWFEI 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
I RIK+L +L +G G PG +++ + TIAC GA+R++++QRAG + + DFL
Sbjct: 240 AIEGVPVRIKVLRCELAQGSGAPGVLLDEHLTIACGSGAIRLLQVQRAGKQPMTAPDFLR 299
Query: 300 GCPVII 305
G P+
Sbjct: 300 GTPLAP 305
>gi|15887718|ref|NP_353399.1| methionyl-tRNA formyltransferase [Agrobacterium tumefaciens str.
C58]
gi|23821560|sp|Q8UID0|FMT_AGRT5 RecName: Full=Methionyl-tRNA formyltransferase
gi|15155279|gb|AAK86184.1| methionyl-tRNA formyl transferase [Agrobacterium tumefaciens str.
C58]
Length = 311
Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats.
Identities = 178/311 (57%), Positives = 221/311 (71%), Gaps = 1/311 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+LR++FMGT +F+V TL+ALV + H IV+VYTQPPRP GRRGL S VH+ A+ L
Sbjct: 1 MSLRIIFMGTPDFSVPTLRALVEAGHEIVAVYTQPPRPGGRRGLDLQKSPVHQVAELLGL 60
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P +E+ +QF FNADVAVVVAYGL++P+ IL+ T+LG YNGHASLLPRWRGA
Sbjct: 61 PVLTPVNFKAEEDRQQFRDFNADVAVVVAYGLLLPEAILSGTRLGCYNGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD ETG+ +MKM+K LDTGPVA KV I N+ L L + A M
Sbjct: 121 APIQRAIMAGDAETGMMVMKMEKGLDTGPVALTAKVAIDENMTAGELHDSLMLAGARLMR 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+AM KLE ++LPL Q E G+ YA KI KGETR++F R A++VHNHIR LSPFPGAWLEM
Sbjct: 181 QAMAKLEADDLPLVTQAEEGVLYAAKIDKGETRIDFSRPAQDVHNHIRGLSPFPGAWLEM 240
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
IG K ER+K+L S+L G G+ G ++ TIAC AVR+ RLQ+AGG+ + DF+
Sbjct: 241 DIGGKPERVKVLASELASGMGEAGSALDDALTIACGSDAVRLTRLQKAGGKPMSAADFVR 300
Query: 300 GCPVIIGCIVG 310
G PV +G
Sbjct: 301 GTPVPATTRLG 311
>gi|307317989|ref|ZP_07597426.1| methionyl-tRNA formyltransferase [Sinorhizobium meliloti AK83]
gi|306896391|gb|EFN27140.1| methionyl-tRNA formyltransferase [Sinorhizobium meliloti AK83]
Length = 311
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 172/310 (55%), Positives = 211/310 (68%), Gaps = 1/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++FMGT EF+V TL AL + H I +VYTQPPRP GRRGL S VH+ A+ +
Sbjct: 1 MPLRMIFMGTPEFSVPTLLALAGAGHEIAAVYTQPPRPGGRRGLDLQKSPVHQAAERLGI 60
Query: 61 PALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P + + F F ADVAVVVAYGL++P+ IL+ T+ G YNGHASLLPRWRGA
Sbjct: 61 PVLTPANFKDAADRQTFRDFGADVAVVVAYGLLLPEEILSGTRYGCYNGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD ETG+ +MKMDK LDTGPVA + VPI + L L + A M
Sbjct: 121 APIQRAIMAGDRETGMMVMKMDKGLDTGPVALAQSVPIDEMVTAGELHDRLMQVGAVLMT 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EAM +LE LPL+PQ + G+ YA KISK ETR++F R A VHNHIR LSPFPGAW E+
Sbjct: 181 EAMARLEAGELPLAPQAQEGVAYAAKISKEETRIDFSRPAAEVHNHIRGLSPFPGAWFEL 240
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ ER+K+L S++ EGEG PGE ++ IAC +GAVR+ RLQRAGG+ L DFL
Sbjct: 241 DTAGRRERVKVLASEMSEGEGDPGEALDHTLGIACGEGAVRLTRLQRAGGKALAAADFLR 300
Query: 300 GCPVIIGCIV 309
G P+ G +
Sbjct: 301 GTPIAAGARI 310
>gi|319789196|ref|YP_004150829.1| methionyl-tRNA formyltransferase [Thermovibrio ammonificans HB-1]
gi|317113698|gb|ADU96188.1| methionyl-tRNA formyltransferase [Thermovibrio ammonificans HB-1]
Length = 314
Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats.
Identities = 113/313 (36%), Positives = 177/313 (56%), Gaps = 9/313 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+VVFMGT +FAV +L+ALV S + V TQP +PAG RG K V A++ +
Sbjct: 5 KLKVVFMGTPDFAVPSLKALVESGFQVPLVITQPDKPAG-RGKKLKPPPVKTVAEKLGIE 63
Query: 62 ALVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P ++ + E+ + D+ VV AYG ++P+ +L+ + G N HASLLP +RGA
Sbjct: 64 VLQPERIKENAELKEKLRAIKPDLIVVAAYGKILPRWLLDLPRFGTVNVHASLLPEYRGA 123
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PIQ A++ G ETG+ IMK+ LD GP+ KV I N L +LS L A +V
Sbjct: 124 SPIQAALLDGKEETGVTIMKVIPELDAGPIIAQEKVKIEPEDNAQTLHDKLSELGAKLLV 183
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + L Q ++ TY ++I+K ++++ SA + N +RA +P+P A+
Sbjct: 184 ETLPRYVKGELKPVEQDDSKATYCKQITKEMGKIDWKESARKIFNAVRAFTPWPSAYTFY 243
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPN--FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+R+K+ ++ VEG G+PGEVI + +AC +GA++I RL+ G + + +F
Sbjct: 244 KG----KRVKITSAEPVEGSGRPGEVIKADRELVVACGKGALKIKRLRPEGKKEISGEEF 299
Query: 298 LLGCPVIIGCIVG 310
+ G V G + G
Sbjct: 300 IRGYRVKEGDLFG 312
>gi|119471680|ref|ZP_01614065.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Alteromonadales bacterium TW-7]
gi|119445459|gb|EAW26746.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Alteromonadales bacterium TW-7]
Length = 317
Score = 212 bits (538), Expect = 7e-53, Method: Composition-based stats.
Identities = 128/315 (40%), Positives = 191/315 (60%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT +FA LQAL++S H IV VY+QP RPAG RG K S V A E LP
Sbjct: 4 PLRIIFAGTPDFAARHLQALINSEHEIVGVYSQPDRPAG-RGKKLKASEVKALALENDLP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E + + NAD+ +VVAYGL++P+ ILNA +LG N H S+LPRWRGAA
Sbjct: 63 VFQPQSLKNDEALAELTALNADIMIVVAYGLILPKAILNAPRLGCLNVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD+ LDTG + + + PIS +A L +L+ L A+++
Sbjct: 123 PIQRAIWAGDEETGVTIMQMDEGLDTGDMLHISRCPISDTETSASLYNKLAELGPSALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++KL +++ PQ + YA+K+SK E +++ SA + +IR+ +P+P + +M
Sbjct: 183 TVNKLANDDITPEPQNDELANYAKKLSKEEANIDWSMSAVQIERNIRSFNPWPVCFTQMG 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +K+ ++++V+ GKPGE++ +AC + A+ I +LQ G + + I DF
Sbjct: 243 E----QTVKIYQAKVVDQSGKPGEILTSDKNGVVVACGEHALSITQLQPQGKKPMAISDF 298
Query: 298 LLGCP--VIIGCIVG 310
L G V G ++G
Sbjct: 299 LNGRSDWVSPGTLLG 313
>gi|110632754|ref|YP_672962.1| methionyl-tRNA formyltransferase [Mesorhizobium sp. BNC1]
gi|123058253|sp|Q11LC8|FMT_MESSB RecName: Full=Methionyl-tRNA formyltransferase
gi|110283738|gb|ABG61797.1| methionyl-tRNA formyltransferase [Chelativorans sp. BNC1]
Length = 311
Score = 212 bits (538), Expect = 7e-53, Method: Composition-based stats.
Identities = 172/310 (55%), Positives = 212/310 (68%), Gaps = 1/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MTLR+VFMGT EF+V TL+AL + H I ++YTQPPRPAGRRGL+ S VH+ A+E L
Sbjct: 1 MTLRLVFMGTPEFSVPTLRALAGAGHEITAIYTQPPRPAGRRGLELTRSPVHQAAEELDL 60
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P +EE + F AD AVVVAYGL++P+ IL T+LG +NGHASLLPRWRGA
Sbjct: 61 YVRTPQSLKSEEEQQVFRELEADAAVVVAYGLLLPRAILEGTRLGAFNGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD ETG+ +MKMD+ LDTGP+A K+ I ++ L + + A MV
Sbjct: 121 APIQRAIMAGDRETGMMVMKMDEGLDTGPIAMTEKIAIGPDMTAGELHDVMKLAGAGLMV 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
A+ LEQ L L+PQ G+TYA+KI K ETRV++ R AE VHNHIR LSP PGAW EM
Sbjct: 181 AAIAALEQGELALTPQPATGVTYAKKIIKEETRVDWSRPAEEVHNHIRGLSPLPGAWCEM 240
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
G+K ER+KLL S L EG G PGEVI+ IAC QGAVR++ LQRAGG+ + DF
Sbjct: 241 PAGDKAERVKLLRSTLSEGSGAPGEVIDEGLAIACGQGAVRLLELQRAGGKPVSAADFQR 300
Query: 300 GCPVIIGCIV 309
G + G +
Sbjct: 301 GSKLGRGTRL 310
>gi|253699292|ref|YP_003020481.1| methionyl-tRNA formyltransferase [Geobacter sp. M21]
gi|251774142|gb|ACT16723.1| methionyl-tRNA formyltransferase [Geobacter sp. M21]
Length = 318
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 112/315 (35%), Positives = 176/315 (55%), Gaps = 10/315 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +R+VFMGT EFA TL+ L+ +V+V TQP RP G RG +++ V A+E
Sbjct: 1 MTGMRIVFMGTPEFACPTLRTLIERGEKVVAVVTQPDRPKG-RGQQTLPPPVKVVAEEHG 59
Query: 60 LPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P K+ E + + N D+ VV+A+G ++P+ +L+ + G N HASLLPR+RG
Sbjct: 60 IPVLQPVKVRLPESIEEIRGLNPDLIVVIAFGQILPKALLDIPRYGCINVHASLLPRYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+ I+ G+ ETG+ M MD LDTG + R PI ++ +T L +S L A +
Sbjct: 120 AAPLNWCIINGETETGVTTMMMDVGLDTGDMLLKRSTPIGADEDTQSLHDRMSQLGAELL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
E +D+L + L Q + YA + K + +++ R A+ + N +R ++P+PGA+
Sbjct: 180 AETLDRLARGELVPEKQDDALTCYAPMMKKEDGVIDWSRDAQAIKNQVRGMTPWPGAYSF 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + +K+ Q G G PGE+++ +AC G++ I LQ G + L G
Sbjct: 240 LDD----KLLKVFRVQTASGSGAPGEILSLGRDGIEVACGTGSLVISELQLEGKKRLPAG 295
Query: 296 DFLLGCPVIIGCIVG 310
DFL G + G ++G
Sbjct: 296 DFLAGYKLQTGGLLG 310
>gi|222054053|ref|YP_002536415.1| methionyl-tRNA formyltransferase [Geobacter sp. FRC-32]
gi|259646035|sp|B9M2D5|FMT_GEOSF RecName: Full=Methionyl-tRNA formyltransferase
gi|221563342|gb|ACM19314.1| methionyl-tRNA formyltransferase [Geobacter sp. FRC-32]
Length = 312
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 112/312 (35%), Positives = 167/312 (53%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT EFA TLQ L+ +V+V TQP RP G RG +++ V A++ +P
Sbjct: 1 MRIIFMGTPEFACPTLQKLIDRKEEVVAVITQPDRPRG-RGQQTLPPPVKVLAEQHGIPV 59
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P E E D+ VVVA+G ++P+ +L+ G N HASLLPRWRGAAP
Sbjct: 60 MQPVKVRVPEVVESIRELAPDLIVVVAFGQILPKSLLDIPPYGCINVHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ I+ GD ETG+ M MD LDTG + + I + NT L LS++ A A+ E
Sbjct: 120 LNWCIIDGDTETGVTTMMMDVGLDTGDMLLKKTTSIDPDENTQSLHDRLSIIGADALAET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D L L Q + YA + K + +++ R +V N +R ++P+PG + +
Sbjct: 180 LDLLNAGKLVREKQDDALTCYASMLKKEDGLIDWSRDPRSVKNLVRGMTPWPGTYTFL-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ +K+ ++ EGEG+PG VI +AC+ G+V I LQ G + L GDFL
Sbjct: 238 --DGKMLKVYRVRIAEGEGEPGTVIGAGRQGLEVACTGGSVIIEELQLEGKKRLPAGDFL 295
Query: 299 LGCPVIIGCIVG 310
G + G +G
Sbjct: 296 AGYKIATGAKLG 307
>gi|300024229|ref|YP_003756840.1| methionyl-tRNA formyltransferase [Hyphomicrobium denitrificans ATCC
51888]
gi|299526050|gb|ADJ24519.1| methionyl-tRNA formyltransferase [Hyphomicrobium denitrificans ATCC
51888]
Length = 308
Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats.
Identities = 149/310 (48%), Positives = 196/310 (63%), Gaps = 4/310 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M L +VFMGT +F+V L ALV++ H +V+VY+QPPRPAG RGL + S VH++A+ +
Sbjct: 1 MPLDIVFMGTPDFSVPVLDALVAAGHRVVAVYSQPPRPAG-RGLAELKSPVHRRAEALGI 59
Query: 61 PALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P +E + D AVVVAYGL++P +L+A +LG +N HAS LPRWRGA
Sbjct: 60 PVRTPKNFKTDEDRATFADLKADAAVVVAYGLLLPAAVLDAPRLGCFNVHASKLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD T + IM+MD+ LDTGPV V I+ + L LS L A MV
Sbjct: 120 APIQRAIMAGDAVTAVNIMRMDEGLDTGPVCLGHDVAIAPDATAGELHDALSALGAELMV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EA+ +LE L PQ + G+TYA KI K ETR++F ++A V NHIR LSP GAW E
Sbjct: 180 EALAELEAGTLRAVPQPQEGVTYAAKIDKRETRIDFAKTATEVANHIRGLSP--GAWFEA 237
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+G K ERIK+L + + G+PG +++ TIAC GA+RI LQRAG + + DFL
Sbjct: 238 NLGGKPERIKVLRASSIAKNGEPGVLLDGELTIACGDGAIRIEELQRAGKQPMKAADFLR 297
Query: 300 GCPVIIGCIV 309
G + G +
Sbjct: 298 GARLEPGTRL 307
>gi|192289056|ref|YP_001989661.1| methionyl-tRNA formyltransferase [Rhodopseudomonas palustris TIE-1]
gi|238692586|sp|B3QCH2|FMT_RHOPT RecName: Full=Methionyl-tRNA formyltransferase
gi|192282805|gb|ACE99185.1| methionyl-tRNA formyltransferase [Rhodopseudomonas palustris TIE-1]
Length = 310
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 153/311 (49%), Positives = 200/311 (64%), Gaps = 2/311 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR+VFMGT EFAV TL AL + H I +VYT+ P+PAG RG+K + V A
Sbjct: 1 MPLRLVFMGTPEFAVPTLLALAAHGHDIAAVYTREPKPAG-RGMKLQETPVALAAHRLQA 59
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P L +E F + AD AVVVAYG+++PQ IL+A +LG YN H SLLPRWRGA
Sbjct: 60 PVLTPKTLRTDEALANFRAHEADAAVVVAYGMILPQAILDAPELGCYNLHGSLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ RAIMAGD ETG+ +MKMD LDTG VA ++ I+ + + +L+ L A MV
Sbjct: 120 APLNRAIMAGDAETGVMVMKMDAGLDTGDVAMAERIAITDAMTVTDVHDQLARLGADLMV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
AM LE+ L L+ Q E+G+TYA KI K E +++F + A V HI LSPFPGAW E+
Sbjct: 180 RAMAALERGGLQLTKQSEDGVTYAAKIDKAEAKIDFAKPAWAVLRHIHGLSPFPGAWCEL 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
I + RIK+L + +G G+PGEVI+ + TIAC GA+R+ +LQRAG + + +FL
Sbjct: 240 PIEGQPVRIKVLRCAIADGRGEPGEVIDDHLTIACGDGAIRVSQLQRAGKQPMTAEEFLR 299
Query: 300 GCPVIIGCIVG 310
G P+ G VG
Sbjct: 300 GTPIAKGVRVG 310
>gi|90422326|ref|YP_530696.1| methionyl-tRNA formyltransferase [Rhodopseudomonas palustris
BisB18]
gi|123089810|sp|Q21B59|FMT_RHOPB RecName: Full=Methionyl-tRNA formyltransferase
gi|90104340|gb|ABD86377.1| methionyl-tRNA formyltransferase [Rhodopseudomonas palustris
BisB18]
Length = 310
Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats.
Identities = 141/306 (46%), Positives = 198/306 (64%), Gaps = 2/306 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++FMGT +FAV TL+ L ++ H IV+VY++ +P+G RG+K + V ++A+ +
Sbjct: 1 MPLRLIFMGTPDFAVPTLRTLAAAGHQIVAVYSREAKPSG-RGMKLQPTPVAQEAERLGI 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P E +F +F AD AVVVAYG+++PQ IL+A G +N H SLLPRWRGA
Sbjct: 60 PVLTPKTLRTPEAAAEFAAFQADAAVVVAYGMILPQPILDAPTFGCFNLHGSLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API RAIMAGD E G+ +MKMD LDTG VA ++ ++ + + L L+ L A MV
Sbjct: 120 APINRAIMAGDPEAGVMVMKMDIGLDTGDVALTGRIALTDAMTASDLHDALAPLGAELMV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EAM +LE+ L + Q E G+TYA KI K E R+++ + A V HI LSPFPGAW E+
Sbjct: 180 EAMAQLERGELTFTKQPEQGVTYAAKIDKAEARIDWAKPAHAVLRHIHGLSPFPGAWCEL 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
I + R+K+L +L +G G+PG +++ IAC GA+RI++LQRAG + + DFL
Sbjct: 240 PIEGEAVRVKILRCELAKGSGEPGTLLDDRLAIACGDGAIRILQLQRAGKQPMQAQDFLR 299
Query: 300 GCPVII 305
G P+
Sbjct: 300 GTPLQP 305
>gi|197117032|ref|YP_002137459.1| methionyl-tRNA formyltransferase [Geobacter bemidjiensis Bem]
gi|229487495|sp|B5ED77|FMT_GEOBB RecName: Full=Methionyl-tRNA formyltransferase
gi|197086392|gb|ACH37663.1| methionyl-tRNA formyltransferase [Geobacter bemidjiensis Bem]
Length = 318
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 113/315 (35%), Positives = 177/315 (56%), Gaps = 10/315 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +R+VFMGT EFA TL+ L+ +V+V TQP RP G RG +++ V A++
Sbjct: 1 MTGMRIVFMGTPEFACPTLRTLIERGEKVVAVVTQPDRPKG-RGQQTLPPPVKVVAEQHG 59
Query: 60 LPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P K+ E + + N D+ VV+A+G ++P+ +L+ K G N HASLLPR+RG
Sbjct: 60 IPVLQPVKVRLPESIEEIRGLNPDLIVVIAFGQILPKALLDIPKYGCINVHASLLPRYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+ I+ G+NETG+ M MD LDTG + R PI ++ +T L +S L A +
Sbjct: 120 AAPLNWCIINGENETGVTTMMMDVGLDTGDMLLKRSTPIGADEDTQSLHDRMSQLGAELL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
E +D+L + L Q + YA + K + +++ R A+ + N +R ++P+PGA+
Sbjct: 180 AETLDRLARGELVPEKQDDALTCYAPMMKKEDGLIDWSRDAQAIKNQVRGMTPWPGAYSF 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + +K+ Q G G PGE+++ +AC G++ I LQ G + L G
Sbjct: 240 LDD----KLLKVFRVQTASGSGAPGEILSCGRDGIEVACGTGSLVIAELQLEGKKRLPAG 295
Query: 296 DFLLGCPVIIGCIVG 310
DFL G + G ++G
Sbjct: 296 DFLAGYKLQPGGLLG 310
>gi|121533702|ref|ZP_01665529.1| methionyl-tRNA formyltransferase [Thermosinus carboxydivorans Nor1]
gi|121307693|gb|EAX48608.1| methionyl-tRNA formyltransferase [Thermosinus carboxydivorans Nor1]
Length = 313
Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats.
Identities = 110/316 (34%), Positives = 174/316 (55%), Gaps = 12/316 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LRV+FMGT +FAV TL+ L+++ H IV+V TQP RP G RG + S V + A LP
Sbjct: 3 KLRVIFMGTPDFAVPTLEKLLAAKHDIVAVVTQPDRPKG-RGQRMAASPVKEFAISQGLP 61
Query: 62 ALVPTKLGQE-EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K+ L DV VVVA+G ++PQ +L+ LG N HASLLPR+RGAA
Sbjct: 62 VLQPEKIKDPVFINHMLQLRPDVIVVVAFGQILPQGLLDLPPLGCINVHASLLPRYRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ +TG+ M MD +DTG + + PI + T L L + A +V
Sbjct: 122 PIHWAIINGETKTGVTTMWMDIGMDTGDMILKAETPIGPDETTGELHDRLKWMGAELLVR 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+++ L N P PQ + +YA +++ +V++ RSA VHN +R L+P+PGA+
Sbjct: 182 SLELLMAGNAPRIPQDNSAASYAPLLTRDIEQVDWRRSALEVHNLVRGLNPWPGAYTT-- 239
Query: 241 IGNKHERIKLLESQLVEGEG---KPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ + +K+ +++++G PG V++ +A +G +++ +Q + +
Sbjct: 240 --HSGKTLKIWRTRIIDGHAGSVPPGTVVDVRHHGVVVATGRGLIQLTEVQPESKKRMQA 297
Query: 295 GDFLLGCPVIIGCIVG 310
++ G + G I+G
Sbjct: 298 CEYARGYNLCAGDILG 313
>gi|239832660|ref|ZP_04680989.1| methionyl-tRNA formyltransferase [Ochrobactrum intermedium LMG
3301]
gi|239824927|gb|EEQ96495.1| methionyl-tRNA formyltransferase [Ochrobactrum intermedium LMG
3301]
Length = 306
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 166/304 (54%), Positives = 212/304 (69%), Gaps = 1/304 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT EF+V L A++ + +V+VYTQPPRPAGRRGL+ S VH+KA++F +P
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAVYTQPPRPAGRRGLELTKSPVHEKAEQFGIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P EE + F S ADVA+VVAYGL++PQ IL+A +LG YNGHASLLPRWRGAAP
Sbjct: 61 FTPKSLRSAEEQDVFASLEADVAIVVAYGLLLPQAILDAPRLGCYNGHASLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETG+ IMKMD LDTGPVA KV I+ ++ L LS++ A M+ A
Sbjct: 121 IQRAIMAGDAETGMMIMKMDAGLDTGPVAMAEKVAITPDMTAGELHDRLSMIGADLMIRA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ +L L PQ E G+TYA KI K E R+++ + A++ HN IR LSPFPGAW EM I
Sbjct: 181 LGALERESLALQPQAEEGVTYAAKIDKAEARIDWSKPAKDAHNTIRGLSPFPGAWCEMEI 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KL S L EG G+PG V++ T+AC +GAVR++ LQR+GG+ L +FL G
Sbjct: 241 NGAVERVKLQRSTLGEGRGEPGAVLDDRLTVACGEGAVRLVTLQRSGGKPLPAQEFLRGA 300
Query: 302 PVII 305
V
Sbjct: 301 QVTK 304
>gi|222147431|ref|YP_002548388.1| methionyl-tRNA formyltransferase [Agrobacterium vitis S4]
gi|254789331|sp|B9JQX1|FMT_AGRVS RecName: Full=Methionyl-tRNA formyltransferase
gi|221734421|gb|ACM35384.1| methionyl-tRNA formyltransferase [Agrobacterium vitis S4]
Length = 320
Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats.
Identities = 172/313 (54%), Positives = 217/313 (69%), Gaps = 4/313 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++FMGT EF+V L AL + H IV+VY+QPPRPAGRRGL S VH++A++ L
Sbjct: 1 MALRMIFMGTPEFSVPILNALFDAGHQIVAVYSQPPRPAGRRGLDLTKSPVHQQAEKLGL 60
Query: 61 PALVPTKLGQEEYEQ-FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P ++ F + ADVAVVVAYGL++P+ IL T+LG YNGHASLLPRWRGA
Sbjct: 61 PVLTPLNFKAQDDRDAFAAHQADVAVVVAYGLLLPEAILTGTRLGCYNGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD +TG+ +MKMDK LDTGPVA R+V I+ ++ L LS + A AMV
Sbjct: 121 APIQRAIMAGDVQTGMMVMKMDKGLDTGPVALTRRVTITPDMTAGELHDALSQIGAEAMV 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EAM KLE +LPL+ Q E+G+ YA KI K ETR+NF + A VHN IR LSPFPGAW E
Sbjct: 181 EAMAKLEAGDLPLTAQPEDGVVYATKIDKAETRINFSKPATQVHNDIRGLSPFPGAWFEA 240
Query: 240 MIGNKHERIKLLE---SQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
I K ERIK+L +++ + PG V++ TIAC GAVR++RLQ+AGG+ LD +
Sbjct: 241 DINGKLERIKVLSSQMAEVTDTANVPGTVLDDALTIACGLGAVRLVRLQKAGGKPLDAAE 300
Query: 297 FLLGCPVIIGCIV 309
FL G P+ G +
Sbjct: 301 FLRGTPIGAGTVF 313
>gi|146337886|ref|YP_001202934.1| methionyl-tRNA formyltransferase [Bradyrhizobium sp. ORS278]
gi|166214878|sp|A4YLC0|FMT_BRASO RecName: Full=Methionyl-tRNA formyltransferase
gi|146190692|emb|CAL74696.1| Methionyl-tRNA formyltransferase [Bradyrhizobium sp. ORS278]
Length = 311
Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats.
Identities = 151/311 (48%), Positives = 196/311 (63%), Gaps = 1/311 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++FMGT +FAV TL L H IV+VYT+ P+P GRRGL V + + +A+ +
Sbjct: 1 MPLRLIFMGTPDFAVPTLLELAGHGHEIVAVYTRAPKPGGRRGLALVPTPIESEARRLGI 60
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P +E +F + AD AVVVAYG+++PQ IL+A KLG YN HASLLPRWRGA
Sbjct: 61 PVLTPKTLKTEEALAEFRAHEADAAVVVAYGMILPQAILDAPKLGCYNLHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API RAIMAGD E+G+ +MKMD LDTG VA + I+ + + L +LS + A MV
Sbjct: 121 APINRAIMAGDAESGVMVMKMDVGLDTGDVAMAELLAITDAMTASDLHDKLSRIGADLMV 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
AM LE+ L L+ Q E+G+TYA KI K E R+++ + A V HI LSPFPGAW E+
Sbjct: 181 RAMAALERGGLTLTKQAEDGVTYAAKIEKAEARIDWTKPAHAVLRHIHGLSPFPGAWSEI 240
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
I + R+K+L L G G+PG V++ TIAC+ A+RI LQRAG + DFL
Sbjct: 241 TIDGEAVRLKILRCALARGTGEPGTVVDDELTIACADSAIRITELQRAGKSPMKAADFLR 300
Query: 300 GCPVIIGCIVG 310
G V G G
Sbjct: 301 GTRVAPGLRFG 311
>gi|210617213|ref|ZP_03291457.1| hypothetical protein CLONEX_03679 [Clostridium nexile DSM 1787]
gi|210149414|gb|EEA80423.1| hypothetical protein CLONEX_03679 [Clostridium nexile DSM 1787]
Length = 311
Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 170/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMGT +F+V TL+AL+ + H +V TQP +P G RG + + V + A + +P
Sbjct: 1 MKVIFMGTPDFSVGTLEALIEAGHDVVLAVTQPDKPKG-RGKEMQFTPVKECALKHGIPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ + E + + AD+ VV+A+G ++ + IL T G N HASLLP++RGAAP
Sbjct: 60 YQPKKVREPECIEELRKYEADIMVVIAFGQILQKEILEMTPYGCVNVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ +I+ G+ TG+ M+MD+ LDTG + ++ I L +L+ A VE
Sbjct: 120 IQWSIIDGETVTGVTTMQMDEGLDTGDMLLKTEIVIEEKETGGSLHDKLAAAGAKLCVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ + Q E+ YA + K +++ +SA+ + IR L+P+P A+
Sbjct: 180 LKALEEKTVTPVKQGESPTAYARMLDKHLGNIDWNQSAKEIERLIRGLTPWPSAYT---- 235
Query: 242 GNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++ E G+ PG ++ F++ G ++++ LQ G + +D G
Sbjct: 236 MWNGKTMKIWSAEVEETSGEGVPGTIVKVEKEAFSVQTKDGLLKVLELQIPGKKRMDAGA 295
Query: 297 FLLGCPVIIGCIV 309
FL G V G I+
Sbjct: 296 FLRGYQVKSGEIL 308
>gi|114706824|ref|ZP_01439724.1| methionyl-tRNA formyltransferase [Fulvimarina pelagi HTCC2506]
gi|114537772|gb|EAU40896.1| methionyl-tRNA formyltransferase [Fulvimarina pelagi HTCC2506]
Length = 317
Score = 208 bits (529), Expect = 9e-52, Method: Composition-based stats.
Identities = 141/317 (44%), Positives = 187/317 (58%), Gaps = 7/317 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+L++ FMGT EFAV TL+A+ + H + VYTQPPR AGRRGL+ S VH+ A L
Sbjct: 1 MSLKLAFMGTPEFAVPTLKAVHRAGHEVACVYTQPPRKAGRRGLEVTPSPVHQTADLLGL 60
Query: 61 PALVPTKLGQE-EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P+ E E F ++ DVAVVVAYGL++P+ +L A K G NGH SLLPRWRGA
Sbjct: 61 KVHTPSNFRDEAERWAFAAYEFDVAVVVAYGLLLPEAVLGAPKHGCLNGHGSLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD TG+ IM+M+ LDTGPVA + I L ++ +CA MV
Sbjct: 121 APIQRAIQAGDTTTGMMIMRMETGLDTGPVARTMETTIGETETAGELHDRMAFMCADLMV 180
Query: 180 EAMDKLEQNNLPLSPQIE------NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+A+ KL+ L Q YA KI K E R+NF +V I A SPFP
Sbjct: 181 DALSKLQAGVLHFEDQDAIAARTGRDACYARKIDKAEARINFKLRGSDVARQINAFSPFP 240
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLD 293
GAW + +G + ERIK+L ++ G+G+PG ++ IAC AVR++ +QRAGG+ +
Sbjct: 241 GAWTILPVGQRQERIKILRARAEPGDGEPGMTLDDGLRIACKSDAVRLLEVQRAGGKPMA 300
Query: 294 IGDFLLGCPVIIGCIVG 310
D L G + G ++G
Sbjct: 301 ASDLLRGVAIPAGTMLG 317
>gi|332533678|ref|ZP_08409537.1| methionyl-tRNA formyltransferase [Pseudoalteromonas haloplanktis
ANT/505]
gi|332036842|gb|EGI73303.1| methionyl-tRNA formyltransferase [Pseudoalteromonas haloplanktis
ANT/505]
Length = 317
Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats.
Identities = 127/315 (40%), Positives = 188/315 (59%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT +FA LQAL+ S H IV VY+QP RPAG RG K S V + A E +LP
Sbjct: 4 PLRIIFAGTPDFAARHLQALIQSEHQIVGVYSQPDRPAG-RGKKLKASEVKELALEHNLP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E + S NAD+ +VVAYGL++P+ IL A +LG N H S+LPRWRGAA
Sbjct: 63 VFQPQSLKNDEALAELTSLNADIMIVVAYGLILPKAILEAPRLGCLNVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD +TG+ IM+MD+ LDTG + + + PIS+ +A L +L+ L A++E
Sbjct: 123 PIQRAIWAGDEQTGVTIMQMDEGLDTGDMLHISRCPISTTETSASLYTKLAELGPDALIE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++KL + PQ + YA+K+SK E +++ SA + +IR+ +P+P + +M
Sbjct: 183 TINKLANGEITPEPQNDELANYAKKLSKEEADIDWSMSALQIERNIRSFNPWPMCFTQMG 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +K+ ++Q++ G PG+++ +AC + A+ I +LQ G + + I DF
Sbjct: 243 G----QTVKIHQAQVMLQSGVPGQILSSDKNGVVVACGEHALCITQLQPQGKKPMAINDF 298
Query: 298 LLGCP--VIIGCIVG 310
L G V G I+G
Sbjct: 299 LNGRSDWVTPGTILG 313
>gi|153008676|ref|YP_001369891.1| methionyl-tRNA formyltransferase [Ochrobactrum anthropi ATCC 49188]
gi|166215491|sp|A6WYK8|FMT_OCHA4 RecName: Full=Methionyl-tRNA formyltransferase
gi|151560564|gb|ABS14062.1| methionyl-tRNA formyltransferase [Ochrobactrum anthropi ATCC 49188]
Length = 306
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 167/304 (54%), Positives = 214/304 (70%), Gaps = 1/304 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT EF+V L A++ + +V+ YTQPPRPAGRRGL+ S VH+KA++F +P
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTKSPVHEKAEQFGIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G EE + F S ADVA+VVAYGL++PQ IL+A +LG YNGHASLLPRWRGAAP
Sbjct: 61 FTPKSLKGAEEQDVFASLEADVAIVVAYGLLLPQAILDAPRLGCYNGHASLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD+ETG+ IMKMD LDTGPVA KV I+ ++ L LS++ A M+ A
Sbjct: 121 IQRAIMAGDSETGMMIMKMDAGLDTGPVAMAEKVAITPDMTAGELHDRLSMIGADLMIRA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ +L L PQ E G+TYA KI K E R+++ + A++VHN IR LSPFPGAW EM I
Sbjct: 181 LGALERESLALQPQAEEGVTYAAKIDKAEARIDWSKPAQDVHNTIRGLSPFPGAWCEMEI 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KL S L EG G+PG V++ T+AC +GAVR++ LQR+GG+ L +FL G
Sbjct: 241 NGAVERVKLQRSALGEGSGEPGTVLDDRLTVACGEGAVRLVTLQRSGGKPLPAQEFLRGA 300
Query: 302 PVII 305
V
Sbjct: 301 QVSK 304
>gi|115522682|ref|YP_779593.1| methionyl-tRNA formyltransferase [Rhodopseudomonas palustris
BisA53]
gi|115516629|gb|ABJ04613.1| methionyl-tRNA formyltransferase [Rhodopseudomonas palustris
BisA53]
Length = 327
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 142/301 (47%), Positives = 200/301 (66%), Gaps = 2/301 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++FMGT +FAV TL+AL + H IV+VYT+ +PAG RG+K + V ++A++ +
Sbjct: 14 MPLRLIFMGTPDFAVPTLRALAARGHDIVAVYTREAKPAG-RGMKLQPTPVEQEARKLGI 72
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P E +F +FNAD AVVVAYG+++PQ IL+A K G +N H SLLPRWRGA
Sbjct: 73 PVLTPKTLRTAEAAAEFAAFNADAAVVVAYGMILPQPILDAPKFGCFNLHGSLLPRWRGA 132
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API RAIMAGD E+G+ +MKMD LDTG VA ++PI+ + L L+ + A M
Sbjct: 133 APINRAIMAGDAESGVMVMKMDIGLDTGDVAMTARLPITETMTAIDLHDALAPIGAKLMA 192
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+A+D LE++ L + Q E+G+TYA KI K E R+++ + A V HI LSPFPGAW E
Sbjct: 193 DAIDALERDELTFTKQSEDGVTYAAKIDKAEARIDWAKPAREVLRHIHGLSPFPGAWCEW 252
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
I + R+K+L +L +G G+PG +++ IAC GA+R+++LQRAG + + +FL
Sbjct: 253 PIEGEPVRVKILRCELAKGSGEPGALLDDRLAIACGDGAIRVLQLQRAGKQPMSAEEFLR 312
Query: 300 G 300
G
Sbjct: 313 G 313
>gi|39933699|ref|NP_945975.1| methionyl-tRNA formyltransferase [Rhodopseudomonas palustris
CGA009]
gi|73919415|sp|Q6NC50|FMT_RHOPA RecName: Full=Methionyl-tRNA formyltransferase
gi|39647545|emb|CAE26066.1| putative methionyl-tRNA formyltransferase [Rhodopseudomonas
palustris CGA009]
Length = 310
Score = 207 bits (527), Expect = 2e-51, Method: Composition-based stats.
Identities = 153/311 (49%), Positives = 200/311 (64%), Gaps = 2/311 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR+VFMGT EFAV TL AL + H I +VYT+ P+PAG RG+K +AV A
Sbjct: 1 MPLRLVFMGTPEFAVPTLLALAAHGHDIAAVYTREPKPAG-RGMKLQETAVALAAHRLQA 59
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P L +E F + AD AVVVAYG+++PQ IL+A +LG YN H SLLPRWRGA
Sbjct: 60 PVLTPKTLRTDEALANFRAHEADAAVVVAYGMILPQAILDAPELGCYNLHGSLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ RAIMAGD ETG+ +MKMD LDTG VA ++ I+ + + +L+ L A MV
Sbjct: 120 APLNRAIMAGDAETGVMVMKMDAGLDTGDVAMAERIAITDAMTVTDVHDQLARLGADLMV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
AM LE+ L L+ Q E+G+TYA KI K E +++F + V HI LSPFPGAW E+
Sbjct: 180 RAMAALERGGLQLTKQSEDGVTYAAKIDKAEAKIDFAKPTRAVLRHIHGLSPFPGAWCEL 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
I + RIK+L + +G G+PGEVI+ + TIAC GA+R+ +LQRAG + + +FL
Sbjct: 240 PIEGQPVRIKVLRCAIADGRGEPGEVIDDHLTIACGDGAIRVSQLQRAGKQPMTAEEFLR 299
Query: 300 GCPVIIGCIVG 310
G P+ G VG
Sbjct: 300 GTPIAKGVRVG 310
>gi|39995241|ref|NP_951192.1| methionyl-tRNA formyltransferase [Geobacter sulfurreducens PCA]
gi|73919395|sp|Q74GW4|FMT_GEOSL RecName: Full=Methionyl-tRNA formyltransferase
gi|39982003|gb|AAR33465.1| methionyl-tRNA formyltransferase [Geobacter sulfurreducens PCA]
gi|298504246|gb|ADI82969.1| methionyl-tRNA formyltransferase [Geobacter sulfurreducens KN400]
Length = 317
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 111/315 (35%), Positives = 162/315 (51%), Gaps = 10/315 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M LR++FMGT EFA TL+ L+ +++V TQP RP G RG K V V AQE
Sbjct: 1 MAGLRIIFMGTPEFACPTLRKLIERGEEVIAVVTQPDRPKG-RGQKLVPPPVKALAQEHD 59
Query: 60 LPALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P E ++ D+ VVVA+G ++PQ +L+ K G N HASLLPR+RG
Sbjct: 60 IPVLQPLKVRTPESVDEIRRLAPDLIVVVAFGQILPQSLLDIPKHGCINIHASLLPRYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+ ++ G+ ETGI M MD LDTG + R +PI + + L LS L A +
Sbjct: 120 AAPLNWCLINGETETGITTMMMDAGLDTGDMLVKRAIPIGPDEDAQSLHDRLSQLGAETI 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
E +D L L Q ++ YA + K + V++ R V N +R +P+PGA+
Sbjct: 180 DETLDLLLAGKLVREKQDDSLTCYAPMLKKEDGLVDWTREPVQVKNQVRGFTPWPGAYTF 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + +KL + G+PGE++ + C G++ I LQ G + L
Sbjct: 240 L----DGKTLKLYRVAVAGETGEPGEILRVGREGILVGCGSGSILIQELQLEGRKRLPTA 295
Query: 296 DFLLGCPVIIGCIVG 310
+FL G + G +G
Sbjct: 296 EFLAGFRLEPGTRLG 310
>gi|254293236|ref|YP_003059259.1| methionyl-tRNA formyltransferase [Hirschia baltica ATCC 49814]
gi|254041767|gb|ACT58562.1| methionyl-tRNA formyltransferase [Hirschia baltica ATCC 49814]
Length = 310
Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats.
Identities = 148/310 (47%), Positives = 191/310 (61%), Gaps = 2/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+LR+VFMG+ +F+V L+ALV + H IV VY+QPPR AG RG + VH A E +
Sbjct: 1 MSLRLVFMGSPDFSVPCLKALVDAGHDIVCVYSQPPRRAG-RGKNERNTPVHDAALELGI 59
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + EE +F + AD+AVVVAYGL++PQ +L+A +LG N HASLLPRWRGA
Sbjct: 60 EVRTPKSVKSEEALNEFAALEADLAVVVAYGLILPQALLDAPRLGCINAHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD+ TG+ IM+M+ LDTGPV V I+ L EL A +V
Sbjct: 120 APIQRAIMAGDDVTGVEIMQMEAGLDTGPVMASVSVDITPETTVGSLHDELCEAGAKLLV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EA+ +LE PQ E GI YA K++ ETR+++ A V HI LSPFPGAW EM
Sbjct: 180 EAVAQLEAGTAKFIPQSEEGIEYAHKLTNEETRIDWSLPARKVRQHIHGLSPFPGAWFEM 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
R+K+LE GEG GEV++ +AC + A+RI RLQRAG V++ DFL
Sbjct: 240 QTPKGPVRVKVLEVADSLGEGNAGEVLDDKLLVACGKDAIRIKRLQRAGKPVMNAEDFLR 299
Query: 300 GCPVIIGCIV 309
G + G I+
Sbjct: 300 GNDLTEGAII 309
>gi|315125136|ref|YP_004067139.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pseudoalteromonas sp. SM9913]
gi|315013649|gb|ADT66987.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pseudoalteromonas sp. SM9913]
Length = 317
Score = 207 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 125/315 (39%), Positives = 186/315 (59%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT +FA LQAL++S H IV VY+QP RPAG RG K S V A E LP
Sbjct: 4 PLRIIFAGTPDFAARHLQALINSEHQIVGVYSQPDRPAG-RGKKLKASEVKALALEHDLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L ++ + LS D+ +VVAYGL++P+ IL+A +LG N H S+LPRWRGAA
Sbjct: 63 VFQPQSLKTDDALEELSSLNADIMIVVAYGLILPKAILDAPRLGCLNVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD +TG+ IM+MD+ LDTG + + + PI S +A L +L+ L A+++
Sbjct: 123 PIQRAIWAGDQQTGVTIMQMDEGLDTGDMLHISRCPIDSTETSASLYTKLAELGPGALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+++L ++ PQ + YA+K+SK E +++ AE + +IRA +P+P + +M
Sbjct: 183 TINRLANGDITPEPQNDADANYAKKLSKDEANIDWSMDAEQIERNIRAFNPWPVCFTQMR 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+K+ ++ +VE G+ G V+ +AC + A+ I LQ G + + I DF
Sbjct: 243 GN----TVKIYQANVVEQSGEAGTVLTSDKNGIVVACGKHALSIGELQPQGKKPMAINDF 298
Query: 298 LLGCP--VIIGCIVG 310
L G V G ++G
Sbjct: 299 LNGRSHWVTPGTVLG 313
>gi|212639616|ref|YP_002316136.1| methionyl-tRNA formyltransferase [Anoxybacillus flavithermus WK1]
gi|212561096|gb|ACJ34151.1| Methionyl-tRNA formyltransferase [Anoxybacillus flavithermus WK1]
Length = 314
Score = 207 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 104/315 (33%), Positives = 168/315 (53%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT +FAV L+ L+ +++V V TQP +P G R + V A+ + +P
Sbjct: 1 MNIVFMGTPDFAVPILEQLIKDGYNVVGVVTQPDKPKG-RKQQLTPPPVKVAAESYGIPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L PTK+ ++E + ++ D+ V A+G ++P+ +L+A G N HASLLP RG AP
Sbjct: 60 LQPTKIREKEQYEQVIALQPDLIVTAAFGQILPKPLLDAPTYGCINVHASLLPELRGGAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G +TGI IM M + LD G + +VPI L +LS A + E
Sbjct: 120 IHYAILQGKEKTGITIMYMVEKLDAGDILTQVEVPIDERDTVGTLHDKLSQAGARLLSET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ KL + ++ Q + T+A I + R+++ ++ E+++NHIR ++P+P A+
Sbjct: 180 LPKLLRGDITPMKQNDEQATFAYNIKPEQERIDWTKTGEDIYNHIRGMNPWPVAYTTYGE 239
Query: 242 GNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLDIG 295
ER KL + V + KPG ++ +A + A++I LQ AG R +
Sbjct: 240 ----ERWKLWWGEKVRASSQAKPGTIVAVEQDGIIVATGNETAIKITELQPAGKRKMSAT 295
Query: 296 DFLLGCPVIIGCIVG 310
DFL G + IG ++G
Sbjct: 296 DFLRGTTISIGTVLG 310
>gi|148258521|ref|YP_001243106.1| methionyl-tRNA formyltransferase [Bradyrhizobium sp. BTAi1]
gi|166214877|sp|A5ESQ6|FMT_BRASB RecName: Full=Methionyl-tRNA formyltransferase
gi|146410694|gb|ABQ39200.1| methionyl-tRNA formyltransferase [Bradyrhizobium sp. BTAi1]
Length = 311
Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats.
Identities = 151/311 (48%), Positives = 197/311 (63%), Gaps = 1/311 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++FMGT +FAV TL L H I +VYT+ P+P GRRGL V + + +A+ +
Sbjct: 1 MPLRLIFMGTPDFAVPTLLELAGHGHEIAAVYTRAPKPGGRRGLALVPTPIETEARRLGI 60
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P +E F + AD AVVVAYG+++PQ IL+A KLG YN HASLLPRWRGA
Sbjct: 61 PVVTPKTLKTEEALTAFRAHQADAAVVVAYGMILPQAILDAPKLGCYNLHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API RAIMAGD ETG+ +MKMD LDTG VA ++PI+ + + L +L+ + A MV
Sbjct: 121 APINRAIMAGDAETGVMVMKMDVGLDTGDVAMAERLPITDAMTASDLHDQLARIGADLMV 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
AM LE+ L L+ Q + G+TYA KI K E R+++ + A V HI LSPFPGAW E+
Sbjct: 181 RAMAALERGGLTLTKQADAGVTYAAKIEKAEARIDWSKPANAVLRHIHGLSPFPGAWSEV 240
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ + R+K+L L +G G+PG VIN TIAC+ GAVR+ LQRAG + DFL
Sbjct: 241 TLDGEAVRLKILRCALADGRGEPGAVINEQLTIACADGAVRVTELQRAGKGPMKAADFLR 300
Query: 300 GCPVIIGCIVG 310
G V G G
Sbjct: 301 GTRVAPGLRFG 311
>gi|220924614|ref|YP_002499916.1| methionyl-tRNA formyltransferase [Methylobacterium nodulans ORS
2060]
gi|254789360|sp|B8IFQ3|FMT_METNO RecName: Full=Methionyl-tRNA formyltransferase
gi|219949221|gb|ACL59613.1| methionyl-tRNA formyltransferase [Methylobacterium nodulans ORS
2060]
Length = 310
Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats.
Identities = 143/310 (46%), Positives = 200/310 (64%), Gaps = 2/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M L+VVFMGT +FAV TL +V S H +V+VYT+ P PAG RG+ S V A+ F L
Sbjct: 1 MPLKVVFMGTPDFAVPTLAEIVGSGHEVVAVYTRAPAPAG-RGMALRPSPVQALAERFGL 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P +E E F +ADVAVVVAYG+++P IL+A +LG N HAS+LPRWRGA
Sbjct: 60 PVRTPATLRSEEAVEIFRGHDADVAVVVAYGMILPPAILDAPRLGCLNLHASILPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRA+MAGD+ETG+A+M+M+ LDTGPVA + +V I+ + L L L A M
Sbjct: 120 APIQRAVMAGDSETGVAVMRMEPGLDTGPVAMLERVAITPEMTAGELHDRLMPLGADLMN 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
A+ LE+ L +PQ GI YA KI+ E R+++ A+ +H+ IR LSPFPGA+
Sbjct: 180 RALGALERGGLTFTPQAAEGIVYAHKITNEEARLDWAEPAQRLHDTIRGLSPFPGAFFMA 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+G ER+K+L + L +G +PG +++ + T+AC +GA+R++R+Q AG ++ GDFL
Sbjct: 240 DLGRGPERVKVLRASLADGRAEPGTLLDAHGTVACGEGAIRLLRVQPAGKGPMEAGDFLR 299
Query: 300 GCPVIIGCIV 309
G + G +
Sbjct: 300 GRRLEPGARL 309
>gi|325294266|ref|YP_004280780.1| methionyl-tRNA formyltransferase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064714|gb|ADY72721.1| Methionyl-tRNA formyltransferase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 311
Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats.
Identities = 110/311 (35%), Positives = 170/311 (54%), Gaps = 9/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L+VVFMGT +FAV +L+ L + I V TQP RPAG RG + V A++F++P
Sbjct: 5 LKVVFMGTPDFAVPSLKKLFEAGFEIPLVITQPDRPAG-RGKRIKPPPVKVLAEKFNIPV 63
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ E + + D+ VV AYG ++P IL+ K G N HASLLP +RGA+
Sbjct: 64 YQPEKVKGNEELLNKLKEISPDLIVVAAYGKILPNEILDLPKFGCINVHASLLPEYRGAS 123
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ G +TG+ IM + LD G + ++V I N L +L+ L A +VE
Sbjct: 124 PIQSALLDGKEKTGVTIMLISPELDAGDIISQKEVLIDRKDNAQTLHDKLANLGAELLVE 183
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L PQ + TY + I+K ++++ AE + N IRA +P+P A+
Sbjct: 184 TIPYYVSGKLKPIPQENSKATYCKPITKEMGKIDWTLPAEKIFNMIRAFTPWPSAYTTF- 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVIN--PNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ +RIKLLE++ +EG G PGEVI I+ +GA+++ +L+ G + + +F+
Sbjct: 243 ---RGKRIKLLEAEPIEGSGNPGEVIKADKELVISTGEGALKVKKLRPEGKKEISGEEFI 299
Query: 299 LGCPVIIGCIV 309
G + +G
Sbjct: 300 RGYRIKVGEKF 310
>gi|148262894|ref|YP_001229600.1| methionyl-tRNA formyltransferase [Geobacter uraniireducens Rf4]
gi|189044512|sp|A5GBL0|FMT_GEOUR RecName: Full=Methionyl-tRNA formyltransferase
gi|146396394|gb|ABQ25027.1| methionyl-tRNA formyltransferase [Geobacter uraniireducens Rf4]
Length = 313
Score = 205 bits (520), Expect = 9e-51, Method: Composition-based stats.
Identities = 115/315 (36%), Positives = 168/315 (53%), Gaps = 10/315 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M +R++FMGT EFA TLQ L+ +++V TQP RP G RG +++ V A+
Sbjct: 1 MAGMRIIFMGTPEFACPTLQKLLDRGEDVIAVITQPDRPKG-RGQQTLPPPVKVLAERHG 59
Query: 60 LPALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P + P E E S D+ VVVA+G ++P+ +L+ K G N HASLLPRWRG
Sbjct: 60 IPVMQPLKVRVPEVVESIRSLAPDLIVVVAFGQILPKSLLDIPKYGCINVHASLLPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+ I+ G+ ETG+ M MD LDTG + R PI + NT L LSV+ A A+
Sbjct: 120 AAPLNWCIINGETETGVTTMMMDVGLDTGDMLVKRSTPIDPDENTQSLHDRLSVVGAEAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
E +D L L Q + YA + K + +++ + + + N +R ++P+PGA+
Sbjct: 180 AETLDLLTAGKLVREKQDDALTCYAPMLKKEDGLIDWSKEPQTIKNLVRGMTPWPGAFSF 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + +K+ GEG PG VI +ACS G++ I LQ G + L G
Sbjct: 240 L----DGKMLKIYRVGTAGGEGTPGSVIRAGREGLEVACSGGSIVIEELQLEGKKRLHAG 295
Query: 296 DFLLGCPVIIGCIVG 310
DFL G + G I+G
Sbjct: 296 DFLAGYKIAPGSILG 310
>gi|316932091|ref|YP_004107073.1| methionyl-tRNA formyltransferase [Rhodopseudomonas palustris DX-1]
gi|315599805|gb|ADU42340.1| methionyl-tRNA formyltransferase [Rhodopseudomonas palustris DX-1]
Length = 311
Score = 205 bits (520), Expect = 9e-51, Method: Composition-based stats.
Identities = 152/310 (49%), Positives = 198/310 (63%), Gaps = 2/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR+VFMGT EFAV TL AL + H IV+VYT+ P+PAG RG+K + V A +
Sbjct: 1 MPLRLVFMGTPEFAVPTLLALSAYGHDIVAVYTREPKPAG-RGMKLQETPVALAAHRLGI 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P ++ +F + AD AVVVAYG+++PQ IL+A LG YN H SLLPRWRGA
Sbjct: 60 PVLTPKTLKTEDAQAEFRAHEADAAVVVAYGMILPQPILDAPPLGCYNLHGSLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ RAIMAGD E+G+ +MKMD LDTG VA ++ I+ + L L+ L A MV
Sbjct: 120 APLNRAIMAGDAESGVMVMKMDIGLDTGDVAMAERIAITDAMTVTELHDALARLGADLMV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
AM LE++ L L+ Q E+G+TYA KI K E +++F + A V HI LSPFPGAW E+
Sbjct: 180 RAMAALERDQLQLTKQPEDGVTYAAKIDKAEAKIDFAQPARAVLRHIHGLSPFPGAWCEL 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
I RIK+L L EG G PGE+I + TIAC GA+R+++LQRAG + + DFL
Sbjct: 240 PIDGAPVRIKVLRCALAEGRGTPGELIGDDLTIACEGGAIRVVQLQRAGKQPMTAEDFLR 299
Query: 300 GCPVIIGCIV 309
G P+ G +
Sbjct: 300 GTPIAKGVRL 309
>gi|92119151|ref|YP_578880.1| methionyl-tRNA formyltransferase [Nitrobacter hamburgensis X14]
gi|123386890|sp|Q1QH77|FMT_NITHX RecName: Full=Methionyl-tRNA formyltransferase
gi|91802045|gb|ABE64420.1| methionyl-tRNA formyltransferase [Nitrobacter hamburgensis X14]
Length = 310
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 145/310 (46%), Positives = 196/310 (63%), Gaps = 2/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++FMGT EFAV TL L++ H I +VYT+ RPAG RG+K S V ++A +
Sbjct: 1 MPLRLIFMGTPEFAVPTLLQLIAHGHEIAAVYTREARPAG-RGMKLQPSPVAREAHRLGI 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P ++F S AD AVVVAYG+++PQ IL+A LG +N H SLLPRWRGA
Sbjct: 60 PVLTPKTLKTPAALDEFRSHGADAAVVVAYGMILPQAILDAPPLGCFNLHGSLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API RAIMAGD ETG+ +MKMD LDTG VA ++ ++ + + L L++L A M
Sbjct: 120 APINRAIMAGDAETGVMVMKMDAGLDTGDVAMAERIAVTDAMTASDLHDALALLGADLMA 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
AM L + L L+ Q E+G+TYA KI K E R+++ R A +V HI LSPFPGAW EM
Sbjct: 180 RAMAALARGGLQLTKQSEHGVTYAAKIDKAEARIDWSRPARDVLRHIHGLSPFPGAWCEM 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
++ + R+K+L +V+G G+PGE+++ TIAC GA+R++ LQRAG + FL
Sbjct: 240 LVDGEQVRVKILRCGVVKGPGEPGELLDDRLTIACKDGAIRVLELQRAGKPPMKADAFLN 299
Query: 300 GCPVIIGCIV 309
G P+
Sbjct: 300 GTPLKPPMRF 309
>gi|158320461|ref|YP_001512968.1| methionyl-tRNA formyltransferase [Alkaliphilus oremlandii OhILAs]
gi|166988361|sp|A8MH85|FMT_ALKOO RecName: Full=Methionyl-tRNA formyltransferase
gi|158140660|gb|ABW18972.1| methionyl-tRNA formyltransferase [Alkaliphilus oremlandii OhILAs]
Length = 310
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 103/314 (32%), Positives = 166/314 (52%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++++MGT EFAV L+ L+ S H IV V+TQP +P+G RG K + V +KA ++P
Sbjct: 1 MKIIYMGTPEFAVPCLEMLIDSGHEIVGVFTQPDKPSG-RGQKMNRTPVKEKALAHNIPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L + D+ VVVAYG ++P+ IL K G N HASLLP++RGA P
Sbjct: 60 FQPHTLRDTNVMNEIENLKPDLIVVVAYGQILPKAILELPKHGCINVHASLLPKYRGAGP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I I+ G+ +TGI M MD LD G + +V I + L L L A + +
Sbjct: 120 INWVIINGEKKTGITTMYMDVGLDKGDMILKEEVEIGAEETAGELHDRLMHLGAQVLRKT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E N + PQ + TYA ++K ++++ +SA + N IR P+P A+
Sbjct: 180 IGLIENNEITAIPQNHSESTYAPILTKDLGKIDWSQSAIEIKNLIRGTIPWPTAFTFYEG 239
Query: 242 GNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +S ++E E + PG++I +A Q + I +Q +G + + + D
Sbjct: 240 ----QVMKIWKSTVIESELQEVPGKIIDVKKDCILVATGQNILSIEEIQFSGKKRMGVRD 295
Query: 297 FLLGCPVIIGCIVG 310
+L+G + G I+G
Sbjct: 296 YLVGNAIEKGNILG 309
>gi|302384320|ref|YP_003820143.1| methionyl-tRNA formyltransferase [Brevundimonas subvibrioides ATCC
15264]
gi|302194948|gb|ADL02520.1| methionyl-tRNA formyltransferase [Brevundimonas subvibrioides ATCC
15264]
Length = 308
Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats.
Identities = 123/310 (39%), Positives = 179/310 (57%), Gaps = 4/310 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ FMGT +FAV +L L++S H +V+VY+QPP+P G RG K S VH A+ LP
Sbjct: 1 MRLAFMGTPDFAVPSLAELIASGHEVVAVYSQPPKPRG-RGQKLTPSPVHAFAETMGLPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + + D A VVAYG ++ +L+A +LG +N H SLLPRWRGAAP
Sbjct: 60 FTPASMKAPDAIETFASLDLDAACVVAYGQILKAEVLSAPRLGCFNLHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD +TG+ IM+M + LD G + +PI+ + A L ++ A A
Sbjct: 120 IQRAIMAGDRQTGVQIMRMSEGLDEGAILLSEVLPIAPDDTAATLSDRMATTGATLWTRA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ + + Q A KI+ E R+++ R A + HIR LSPFPGAW E
Sbjct: 180 LAAIERGGVTETEQAGEVTY-ARKITPAEARIDWTRPAAELDCHIRGLSPFPGAWFEAPG 238
Query: 242 GNKHERIK-LLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ R+K L+ + + +G G PGEV++ + I GAVR++R+QR G DFL G
Sbjct: 239 PDGPVRVKALMSAPVAQGSGAPGEVLDGDLLIGTGDGAVRLLRVQREGKAAQGPADFLRG 298
Query: 301 CPVIIGCIVG 310
+ +G I+G
Sbjct: 299 FALPVGTILG 308
>gi|225686788|ref|YP_002734760.1| methionyl-tRNA formyltransferase [Brucella melitensis ATCC 23457]
gi|256262078|ref|ZP_05464610.1| methionyl-tRNA formyltransferase [Brucella melitensis bv. 2 str.
63/9]
gi|254789341|sp|C0RMH3|FMT_BRUMB RecName: Full=Methionyl-tRNA formyltransferase
gi|225642893|gb|ACO02806.1| methionyl-tRNA formyltransferase [Brucella melitensis ATCC 23457]
gi|263091767|gb|EEZ16098.1| methionyl-tRNA formyltransferase [Brucella melitensis bv. 2 str.
63/9]
gi|326411196|gb|ADZ68260.1| methionyl-tRNA formyltransferase [Brucella melitensis M28]
gi|326554487|gb|ADZ89126.1| methionyl-tRNA formyltransferase [Brucella melitensis M5-90]
Length = 306
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 167/304 (54%), Positives = 212/304 (69%), Gaps = 1/304 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT EF+V L A++ + +V+ YTQPPRPAGRRGL+ S VH+KA++F +P
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTRSPVHEKAEQFGIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G EE + F S ADVA+VVAYGL++P+ IL+A +LG YNGHASLLPRWRGAAP
Sbjct: 61 FTPKSLKGAEEQDVFASLKADVAIVVAYGLLLPKAILDAPRLGCYNGHASLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETG+ IMKMD+ LDTGPVA KV I+ ++ L LS++ A M+ A
Sbjct: 121 IQRAIMAGDAETGMMIMKMDEGLDTGPVAMAEKVAITPDMTAGELHDRLSMIGADLMIRA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ +L L PQ E G+TYA KI K E R+++ + A++VHN IR LSPFPGAW EM I
Sbjct: 181 LGALERESLALQPQAEEGVTYAAKIDKAEARIDWSKPAKDVHNSIRGLSPFPGAWCEMEI 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KL S L EG G PG V++ TIAC +GAVR+ LQR+GG+ L +FL G
Sbjct: 241 NGAVERVKLQRSTLGEGSGAPGTVLDDRLTIACGEGAVRLATLQRSGGKPLPAQEFLRGQ 300
Query: 302 PVII 305
V
Sbjct: 301 RVTK 304
>gi|17988609|ref|NP_541242.1| methionyl-tRNA formyltransferase [Brucella melitensis bv. 1 str.
16M]
gi|23500756|ref|NP_700196.1| methionyl-tRNA formyltransferase [Brucella suis 1330]
gi|161621081|ref|YP_001594967.1| methionyl-tRNA formyltransferase [Brucella canis ATCC 23365]
gi|254700228|ref|ZP_05162056.1| methionyl-tRNA formyltransferase [Brucella suis bv. 5 str. 513]
gi|254703349|ref|ZP_05165177.1| methionyl-tRNA formyltransferase [Brucella suis bv. 3 str. 686]
gi|254710741|ref|ZP_05172552.1| methionyl-tRNA formyltransferase [Brucella pinnipedialis B2/94]
gi|254712789|ref|ZP_05174600.1| methionyl-tRNA formyltransferase [Brucella ceti M644/93/1]
gi|254715858|ref|ZP_05177669.1| methionyl-tRNA formyltransferase [Brucella ceti M13/05/1]
gi|256015793|ref|YP_003105802.1| methionyl-tRNA formyltransferase [Brucella microti CCM 4915]
gi|256029124|ref|ZP_05442738.1| methionyl-tRNA formyltransferase [Brucella pinnipedialis M292/94/1]
gi|256043902|ref|ZP_05446821.1| methionyl-tRNA formyltransferase [Brucella melitensis bv. 1 str.
Rev.1]
gi|256058807|ref|ZP_05449023.1| methionyl-tRNA formyltransferase [Brucella neotomae 5K33]
gi|256111034|ref|ZP_05452096.1| methionyl-tRNA formyltransferase [Brucella melitensis bv. 3 str.
Ether]
gi|260565078|ref|ZP_05835563.1| methionyl-tRNA formyltransferase [Brucella melitensis bv. 1 str.
16M]
gi|260567721|ref|ZP_05838190.1| methionyl-tRNA formyltransferase [Brucella suis bv. 4 str. 40]
gi|261217619|ref|ZP_05931900.1| methionyl-tRNA formyltransferase [Brucella ceti M13/05/1]
gi|261318309|ref|ZP_05957506.1| methionyl-tRNA formyltransferase [Brucella pinnipedialis B2/94]
gi|261320496|ref|ZP_05959693.1| methionyl-tRNA formyltransferase [Brucella ceti M644/93/1]
gi|261322744|ref|ZP_05961941.1| methionyl-tRNA formyltransferase [Brucella neotomae 5K33]
gi|261750723|ref|ZP_05994432.1| methionyl-tRNA formyltransferase [Brucella suis bv. 5 str. 513]
gi|261753979|ref|ZP_05997688.1| methionyl-tRNA formyltransferase [Brucella suis bv. 3 str. 686]
gi|265986107|ref|ZP_06098664.1| methionyl-tRNA formyltransferase [Brucella pinnipedialis M292/94/1]
gi|265990324|ref|ZP_06102881.1| methionyl-tRNA formyltransferase [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992569|ref|ZP_06105126.1| methionyl-tRNA formyltransferase [Brucella melitensis bv. 3 str.
Ether]
gi|54037114|sp|P64133|FMT_BRUSU RecName: Full=Methionyl-tRNA formyltransferase
gi|54040767|sp|P64132|FMT_BRUME RecName: Full=Methionyl-tRNA formyltransferase
gi|189044501|sp|A9MCV9|FMT_BRUC2 RecName: Full=Methionyl-tRNA formyltransferase
gi|17984411|gb|AAL53506.1| methionyl-tRNA formyltransferase [Brucella melitensis bv. 1 str.
16M]
gi|23464411|gb|AAN34201.1| methionyl-tRNA formyltransferase [Brucella suis 1330]
gi|161337892|gb|ABX64196.1| methionyl-tRNA formyltransferase [Brucella canis ATCC 23365]
gi|255998453|gb|ACU50140.1| methionyl-tRNA formyltransferase [Brucella microti CCM 4915]
gi|260152721|gb|EEW87814.1| methionyl-tRNA formyltransferase [Brucella melitensis bv. 1 str.
16M]
gi|260154386|gb|EEW89467.1| methionyl-tRNA formyltransferase [Brucella suis bv. 4 str. 40]
gi|260922708|gb|EEX89276.1| methionyl-tRNA formyltransferase [Brucella ceti M13/05/1]
gi|261293186|gb|EEX96682.1| methionyl-tRNA formyltransferase [Brucella ceti M644/93/1]
gi|261297532|gb|EEY01029.1| methionyl-tRNA formyltransferase [Brucella pinnipedialis B2/94]
gi|261298724|gb|EEY02221.1| methionyl-tRNA formyltransferase [Brucella neotomae 5K33]
gi|261740476|gb|EEY28402.1| methionyl-tRNA formyltransferase [Brucella suis bv. 5 str. 513]
gi|261743732|gb|EEY31658.1| methionyl-tRNA formyltransferase [Brucella suis bv. 3 str. 686]
gi|262763439|gb|EEZ09471.1| methionyl-tRNA formyltransferase [Brucella melitensis bv. 3 str.
Ether]
gi|263000993|gb|EEZ13683.1| methionyl-tRNA formyltransferase [Brucella melitensis bv. 1 str.
Rev.1]
gi|264658304|gb|EEZ28565.1| methionyl-tRNA formyltransferase [Brucella pinnipedialis M292/94/1]
Length = 306
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 167/304 (54%), Positives = 212/304 (69%), Gaps = 1/304 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT EF+V L A++ + +V+ YTQPPRPAGRRGL+ S VH+KA++F +P
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTRSPVHEKAEQFGIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G EE + F S ADVA+VVAYGL++P+ IL+A +LG YNGHASLLPRWRGAAP
Sbjct: 61 FTPKSLKGAEEQDVFASLEADVAIVVAYGLLLPKAILDAPRLGCYNGHASLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETG+ IMKMD+ LDTGPVA KV I+ ++ L LS++ A M+ A
Sbjct: 121 IQRAIMAGDAETGMMIMKMDEGLDTGPVAMAEKVAITPDMTAGELHDRLSMIGADLMIRA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ +L L PQ E G+TYA KI K E R+++ + A++VHN IR LSPFPGAW EM I
Sbjct: 181 LGALERESLALQPQAEEGVTYAAKIDKAEARIDWSKPAKDVHNSIRGLSPFPGAWCEMEI 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KL S L EG G PG V++ TIAC +GAVR+ LQR+GG+ L +FL G
Sbjct: 241 NGAVERVKLQRSTLGEGSGAPGTVLDDRLTIACGEGAVRLATLQRSGGKPLPAQEFLRGQ 300
Query: 302 PVII 305
V
Sbjct: 301 RVTK 304
>gi|256157316|ref|ZP_05455234.1| methionyl-tRNA formyltransferase [Brucella ceti M490/95/1]
gi|256253706|ref|ZP_05459242.1| methionyl-tRNA formyltransferase [Brucella ceti B1/94]
gi|261220843|ref|ZP_05935124.1| methionyl-tRNA formyltransferase [Brucella ceti B1/94]
gi|265995801|ref|ZP_06108358.1| methionyl-tRNA formyltransferase [Brucella ceti M490/95/1]
gi|260919427|gb|EEX86080.1| methionyl-tRNA formyltransferase [Brucella ceti B1/94]
gi|262550098|gb|EEZ06259.1| methionyl-tRNA formyltransferase [Brucella ceti M490/95/1]
Length = 306
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 166/304 (54%), Positives = 212/304 (69%), Gaps = 1/304 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT EF+V L A++ + +V+ YTQPPRPAGRRGL+ S VH+KA++F +P
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTRSPVHEKAEQFGIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G EE + F S ADVA+VVAYGL++P+ IL+A +LG YNGHASLLPRWRGAAP
Sbjct: 61 FTPKSLKGAEEQDVFASLEADVAIVVAYGLLLPKAILDAPRLGCYNGHASLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETG+ IMKMD+ LDTGPVA KV I+ ++ L LS++ A M+ A
Sbjct: 121 IQRAIMAGDAETGMMIMKMDEGLDTGPVAMAEKVAITPDMTAGELHDRLSMIGADLMIRA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ +L L PQ E G+TYA KI K + R+++ + A++VHN IR LSPFPGAW EM I
Sbjct: 181 LGALERESLALQPQAEEGVTYAAKIDKAKARIDWSKPAKDVHNSIRGLSPFPGAWCEMEI 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KL S L EG G PG V++ TIAC +GAVR+ LQR+GG+ L +FL G
Sbjct: 241 NGAVERVKLQRSTLGEGSGAPGTVLDDRLTIACGEGAVRLATLQRSGGKPLPAQEFLRGQ 300
Query: 302 PVII 305
V
Sbjct: 301 RVTK 304
>gi|62317862|ref|YP_223715.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 1 str.
9-941]
gi|83269840|ref|YP_419131.1| methionyl-tRNA formyltransferase [Brucella melitensis biovar
Abortus 2308]
gi|189023112|ref|YP_001932853.1| methionyl-tRNA formyltransferase [Brucella abortus S19]
gi|237817403|ref|ZP_04596395.1| methionyl-tRNA formyltransferase [Brucella abortus str. 2308 A]
gi|254696043|ref|ZP_05157871.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 3 str.
Tulya]
gi|254699152|ref|ZP_05160980.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 2 str.
86/8/59]
gi|254732596|ref|ZP_05191174.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 4 str. 292]
gi|260545097|ref|ZP_05820918.1| methionyl-tRNA formyltransferase [Brucella abortus NCTC 8038]
gi|260760408|ref|ZP_05872756.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 4 str. 292]
gi|260763648|ref|ZP_05875980.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 2 str.
86/8/59]
gi|261216475|ref|ZP_05930756.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 3 str.
Tulya]
gi|73919382|sp|Q576T0|FMT_BRUAB RecName: Full=Methionyl-tRNA formyltransferase
gi|123754474|sp|Q2YJQ3|FMT_BRUA2 RecName: Full=Methionyl-tRNA formyltransferase
gi|238691506|sp|B2SC20|FMT_BRUA1 RecName: Full=Methionyl-tRNA formyltransferase
gi|62198055|gb|AAX76354.1| Fmt, methionyl-tRNA formyltransferase [Brucella abortus bv. 1 str.
9-941]
gi|82940114|emb|CAJ13162.1| Formyl transferase, N-terminal:Formyl transferase,
C-terminal:Methionyl-tRNA formyltransferase [Brucella
melitensis biovar Abortus 2308]
gi|189021686|gb|ACD74407.1| Methionyl-tRNA formyltransferase [Brucella abortus S19]
gi|237788216|gb|EEP62432.1| methionyl-tRNA formyltransferase [Brucella abortus str. 2308 A]
gi|260098368|gb|EEW82242.1| methionyl-tRNA formyltransferase [Brucella abortus NCTC 8038]
gi|260670726|gb|EEX57666.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 4 str. 292]
gi|260674069|gb|EEX60890.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 2 str.
86/8/59]
gi|260918082|gb|EEX84943.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 3 str.
Tulya]
Length = 306
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 168/304 (55%), Positives = 213/304 (70%), Gaps = 1/304 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT EF+V L A++ + +V+ YTQPPRPAGRRGL+ S VH+KA++F +P
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTRSPVHEKAEQFGIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
PT G EE + F S ADVA+VVAYGL++P+ IL+A +LG YNGHASLLPRWRGAAP
Sbjct: 61 FTPTSLKGAEEQDVFASLEADVAIVVAYGLLLPKAILDAPRLGCYNGHASLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETG+ IMKMD+ LDTGPVA KV I+ ++ L LS++ A M+ A
Sbjct: 121 IQRAIMAGDAETGMMIMKMDEGLDTGPVAMAEKVAITPDMTAGELHDRLSMIGADLMIRA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ +L L PQ E G+TYA KI K E R+++ + A++VHN IR LSPFPGAW EM I
Sbjct: 181 LGALERESLALQPQAEEGVTYAAKIDKAEARIDWSKPAKDVHNSIRGLSPFPGAWCEMEI 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KL S L EG G PG V++ TIAC +GAVR+ LQR+GG+ L +FL G
Sbjct: 241 NGAVERVKLQRSTLGEGSGAPGTVLDDRLTIACGEGAVRLATLQRSGGKPLPAQEFLRGQ 300
Query: 302 PVII 305
V
Sbjct: 301 RVTK 304
>gi|170742367|ref|YP_001771022.1| methionyl-tRNA formyltransferase [Methylobacterium sp. 4-46]
gi|229487500|sp|B0UP41|FMT_METS4 RecName: Full=Methionyl-tRNA formyltransferase
gi|168196641|gb|ACA18588.1| methionyl-tRNA formyltransferase [Methylobacterium sp. 4-46]
Length = 310
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 143/310 (46%), Positives = 197/310 (63%), Gaps = 2/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+L+VVFMGT +FAV TL +V H +V+VYT+ P PAG RG+ S V A+ F L
Sbjct: 1 MSLKVVFMGTPDFAVPTLAEIVGGGHEVVAVYTRAPAPAG-RGMALRPSPVQALAERFGL 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P+ G E E F + ADVAVVVAYG+++P IL+A LG N HAS+LPRWRGA
Sbjct: 60 PVLTPSTLRGPEAAETFRAHGADVAVVVAYGMILPPAILDAPPLGCLNLHASILPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRA+MAGD ETG+A+M+M+ LDTGPVA + +V IS + L L L A M
Sbjct: 120 APIQRAVMAGDAETGVAVMRMEPGLDTGPVAMLERVAISPEMTAGDLHDRLMPLGADLMH 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
A+ LE+ L +PQ G+ YA KI+ E R+++ A +H+ +R LSPFPGA+
Sbjct: 180 RALGALERGGLTFTPQPAEGVVYAHKITNEEARLDWTAPAARLHDRVRGLSPFPGAFFLA 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+G ER+K+L ++ EG G PG +++ T+AC +GA+R++R+Q AG ++ DFL
Sbjct: 240 DLGRGPERVKVLRARSAEGSGAPGTLLDEAGTVACGEGALRLLRVQPAGKAAMEAADFLR 299
Query: 300 GCPVIIGCIV 309
G + G +
Sbjct: 300 GRRLEPGTRL 309
>gi|225629483|ref|ZP_03787516.1| methionyl-tRNA formyltransferase [Brucella ceti str. Cudo]
gi|260167784|ref|ZP_05754595.1| methionyl-tRNA formyltransferase [Brucella sp. F5/99]
gi|261757221|ref|ZP_06000930.1| methionyl-tRNA formyltransferase [Brucella sp. F5/99]
gi|225615979|gb|EEH13028.1| methionyl-tRNA formyltransferase [Brucella ceti str. Cudo]
gi|261737205|gb|EEY25201.1| methionyl-tRNA formyltransferase [Brucella sp. F5/99]
Length = 306
Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 167/304 (54%), Positives = 211/304 (69%), Gaps = 1/304 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT EF+V L A++ + +V+ YTQPPRPAGRRGL+ S VH+KA++F +P
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTRSPVHEKAEQFGIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G EE + F S ADVA+VVAYGL++P+ IL+A +LG YNGHASLLPRWRGAAP
Sbjct: 61 FTPKSLKGAEEQDVFASLEADVAIVVAYGLLLPKAILDAPRLGCYNGHASLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETG+ IMKMD+ LDTGPVA KV I+ + L LS++ A M+ A
Sbjct: 121 IQRAIMAGDAETGMMIMKMDEGLDTGPVAMAEKVAITPGMTAGELHDRLSMIGADLMIRA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ +L L PQ E G+TYA KI K E R+++ + A++VHN IR LSPFPGAW EM I
Sbjct: 181 LGALERESLALQPQAEEGVTYAAKIDKAEARIDWSKPAKDVHNSIRGLSPFPGAWCEMEI 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KL S L EG G PG V++ TIAC +GAVR+ LQR+GG+ L +FL G
Sbjct: 241 NGAVERVKLQRSTLGEGSGTPGTVLDDRLTIACGEGAVRLATLQRSGGKPLPAQEFLRGQ 300
Query: 302 PVII 305
V
Sbjct: 301 RVTK 304
>gi|78224530|ref|YP_386277.1| methionyl-tRNA formyltransferase [Geobacter metallireducens GS-15]
gi|123729163|sp|Q39QC2|FMT_GEOMG RecName: Full=Methionyl-tRNA formyltransferase
gi|78195785|gb|ABB33552.1| methionyl-tRNA formyltransferase [Geobacter metallireducens GS-15]
Length = 311
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 108/310 (34%), Positives = 165/310 (53%), Gaps = 9/310 (2%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
++FMGT +FA TL L+ +++V TQP RP G RG K V V A+E +P L
Sbjct: 6 IIFMGTPDFACPTLTRLIERGEDVIAVVTQPDRPKG-RGQKLVPPPVKVIAEEHGIPVLQ 64
Query: 65 PTKLGQEEYE-QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K+ E Q N D+ VVVA+G ++PQ +L + G N HASLLPR+RGAAPI
Sbjct: 65 PQKVRAPEVVAQIRELNPDLIVVVAFGQILPQSLLEIPRHGCINIHASLLPRYRGAAPIN 124
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
++ G+ ETGI M+MD LDTG + R + I + + L LS+L A + E +D
Sbjct: 125 WCLINGETETGITTMQMDAGLDTGDMLVKRSISIGPDEDAQSLHDRLSLLGAETIDETLD 184
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+L+ L Q + YA + K + +++ + + + N +R +P+PGA+ +
Sbjct: 185 RLQVGTLTREKQDDALTCYAPMLKKEDGLIDWKQEPQQIKNLVRGFTPWPGAYTTL---- 240
Query: 244 KHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ +KL + + GKPG+++ + C G++RI LQ G + L DFL G
Sbjct: 241 DGKTLKLYKVSVATECGKPGDIMAVGKDGIIVGCGSGSLRIEELQLEGRKRLSAQDFLAG 300
Query: 301 CPVIIGCIVG 310
C + G +G
Sbjct: 301 CRLEPGIRLG 310
>gi|329890847|ref|ZP_08269190.1| methionyl-tRNA formyltransferase [Brevundimonas diminuta ATCC
11568]
gi|328846148|gb|EGF95712.1| methionyl-tRNA formyltransferase [Brevundimonas diminuta ATCC
11568]
Length = 324
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 130/308 (42%), Positives = 175/308 (56%), Gaps = 3/308 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ FMGT +FAV +L L++S H IV+VY+QPPRP G RG K S VH A+ LP
Sbjct: 1 MRLAFMGTPDFAVPSLAELIASGHEIVAVYSQPPRPKG-RGQKLTPSPVHAFAEAMGLPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + E D A VVAYG ++ +L A +LG +N H SLLPRWRGAAP
Sbjct: 60 FTPESMKSPEAIDVFKSLDLDAACVVAYGQILKPEVLEAPRLGCFNLHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD +TG IM+M + LD G + + I ++ A L ++ + A A
Sbjct: 120 IQRAIMAGDRQTGAQIMRMSEGLDEGAIILSELMDIHADDTAASLGDRMAHVGAALWPRA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ + Q A+KI+ E R+++ R A V HIR LSPFPGAW E+
Sbjct: 180 LAAIERGGFTETQQAGEPTY-AKKITSAEARIDWTRPAAEVDAHIRGLSPFPGAWFEVEA 238
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+ RIK L S L EG+G PG+V++ TIAC GAVR+ R+QR G + L G
Sbjct: 239 DGEPVRIKALMSVLAEGQGTPGQVLDDALTIACGTGAVRLTRVQRPGKAAQPADEMLRGF 298
Query: 302 PVIIGCIV 309
PV G ++
Sbjct: 299 PVPAGAML 306
>gi|291549492|emb|CBL25754.1| methionyl-tRNA formyltransferase [Ruminococcus torques L2-14]
Length = 312
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 102/314 (32%), Positives = 167/314 (53%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT +F+V TL+ALV + H + V +QP +P G RG + + V + A + +P
Sbjct: 1 MRIIFMGTPDFSVGTLEALVEAGHEVCLVVSQPDKPKG-RGKEMQPTPVKEAALKHGIPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ E + +NADV VVVA+G +IP+ IL T G N HASLLP++RGAAP
Sbjct: 60 YQPKKIRDPECVEELRKYNADVMVVVAFGQIIPKEILEMTPYGCINVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ +I+ G+ TG+ M+M++ LDTG + +VPI+ + L +L+ A VE
Sbjct: 120 IQWSIINGEEVTGVTTMQMNEGLDTGDMIQKVEVPITEDETGESLHDKLAEAGAKLCVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E + Q E+ YA + K +++ SA + +R L+ +P A+
Sbjct: 180 LKAIEDHTATFEKQGESPTEYARMLDKKLGNIDWNTSAVRIERLVRGLNSWPSAYT---- 235
Query: 242 GNKHERIKLLESQLVEG---EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ + +PG V+ +FT+ G +R++ LQ G + +D G
Sbjct: 236 HWDKKVVKIWRAKAEADGTVKAEPGTVLSVEKDSFTVQTGDGVLRVLELQIPGKKRMDTG 295
Query: 296 DFLLGCPVIIGCIV 309
FL G + G
Sbjct: 296 AFLRGYTIESGVKF 309
>gi|83309341|ref|YP_419605.1| methionyl-tRNA formyltransferase [Magnetospirillum magneticum
AMB-1]
gi|123727054|sp|Q2WAS9|FMT_MAGMM RecName: Full=Methionyl-tRNA formyltransferase
gi|82944182|dbj|BAE49046.1| Methionyl-tRNA formyltransferase [Magnetospirillum magneticum
AMB-1]
Length = 305
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 134/310 (43%), Positives = 194/310 (62%), Gaps = 7/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +F+V L +L+ + H ++ VY+QPPRPAG RG K L+ VH A E +P
Sbjct: 1 MKLVFMGTPDFSVPILDSLIEAGHQVICVYSQPPRPAG-RGHKEQLTPVHAFAHERGIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E +F + ADVAVV AYGL++PQ +L+A +LG N HASLLPRWRGAAP
Sbjct: 60 RTPKSLKPAEAQAEFAALEADVAVVAAYGLILPQAVLDAPRLGCLNVHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+AGD ETGI IM+MD LDTG + + ++ + L L+ + A +VE
Sbjct: 120 IQRAILAGDAETGITIMQMDAGLDTGAMLSRESILLAPDTTAPWLHDMLAAMGARMIVET 179
Query: 182 MDKLEQNNLPL-SPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +LE + P +PQ G+TYA K++K E +++ R+A + +RAL+P+PG W EM
Sbjct: 180 LARLEDDEPPAATPQPAEGVTYAHKLAKEEGLLDWRRNAVELDRKVRALNPWPGVWFEMA 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
ERIK+LE+ + G G PG V++ TIAC + A+R +++QRAG + + L G
Sbjct: 240 G----ERIKVLEAAVTPGSGAPGTVLDDQLTIACGKFALRPLKVQRAGKAPMTASEMLRG 295
Query: 301 CPVIIGCIVG 310
+ G ++G
Sbjct: 296 HAIPKGTVLG 305
>gi|158422421|ref|YP_001523713.1| methionyl-tRNA formyltransferase [Azorhizobium caulinodans ORS 571]
gi|158329310|dbj|BAF86795.1| methionyl-tRNA formyltransferase [Azorhizobium caulinodans ORS 571]
Length = 307
Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats.
Identities = 150/308 (48%), Positives = 190/308 (61%), Gaps = 3/308 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +F+V TL +V H +V VYT+ P P+GRRGL+ V S VH A+ F +P
Sbjct: 1 MRIVFMGTPDFSVPTLSEIVGRGHEVVGVYTRAPAPSGRRGLELVPSPVHTVAERFGIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G+E QF ADVAVVVAYGL++P IL+ LG N HASLLPRWRGAAP
Sbjct: 61 FTPKSLKGEEAAAQFRELGADVAVVVAYGLILPTSILDIPALGCLNLHASLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETGIA+MKM+ LDTGPV + +V I ++ L LS + A M A
Sbjct: 121 IQRAIMAGDKETGIAVMKMEAGLDTGPVGLLERVIIGPDMTAGELHDRLSYIGADLMGRA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ L +PQ + GI YA KI K E R+++ R A VHN IR LSPFPGAW
Sbjct: 181 LSALERGGLDFTPQPDEGIVYASKIEKAEARIDWSRPAAEVHNTIRGLSPFPGAWFPFGA 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
R+K+L + L +G G PG ++ TIAC GAVR+ LQ+AG + + FL G
Sbjct: 241 DEA--RVKVLRASLADGTGAPGTALDDQLTIACGTGAVRLTELQKAGKQPMSAATFLNGN 298
Query: 302 PVIIGCIV 309
V G +
Sbjct: 299 DVPKGTRL 306
>gi|284047693|ref|YP_003398032.1| methionyl-tRNA formyltransferase [Acidaminococcus fermentans DSM
20731]
gi|283951914|gb|ADB46717.1| methionyl-tRNA formyltransferase [Acidaminococcus fermentans DSM
20731]
Length = 312
Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats.
Identities = 111/315 (35%), Positives = 177/315 (56%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VFMGT EFA A+L+ALV S + I +V TQP RP G RG K ++SAV + A LP
Sbjct: 1 MKIVFMGTPEFAAASLKALVESGNCEIAAVVTQPDRPKG-RGHKVMMSAVKEYALTQDLP 59
Query: 62 ALVPTKLGQEEYE-QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P ++ E++ + D+ VV A+G +P+ +L+ + G N HASLLPR+RGAA
Sbjct: 60 VLQPQRVKTPEFQAEMEKIQPDLIVVAAFGQFLPKELLDLPRYGCINVHASLLPRYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ E G+ IM+MD +DTG + VP+ + L L A +++
Sbjct: 120 PIHYAILKGEKEAGVTIMQMDVGMDTGAMLSRTAVPVGPEMTQGELHDILKEKGARLLLD 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ + PQ E TYA I++ R ++ + AE++HN RA P+PG++ +
Sbjct: 180 TIPRIVAGTVQPVPQPEEEATYASLITRDMERADWNKKAEDLHNQFRAFDPWPGSFTLLP 239
Query: 241 IGNKHERIKLLESQLVEGE---GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+R+K+ +S+++ GE G PG V+ + F +AC QG++ I+ Q G + +
Sbjct: 240 D---GKRLKIWKSRILAGEGSQGAPGTVLQADSRGFRVACGQGSLEILECQPEGKKRMPA 296
Query: 295 GDFLLGCPVIIGCIV 309
F+ G V G +
Sbjct: 297 ASFVNGGHVKPGDRL 311
>gi|306846235|ref|ZP_07478797.1| methionyl-tRNA formyltransferase [Brucella sp. BO1]
gi|306273486|gb|EFM55347.1| methionyl-tRNA formyltransferase [Brucella sp. BO1]
Length = 306
Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats.
Identities = 166/304 (54%), Positives = 210/304 (69%), Gaps = 1/304 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT EF+V L A++ + +V+ YTQPPRPAGRRGL+ S VH+KA++F +P
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTRSPVHEKAEQFGIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G EE + F S ADVA+VVAYGL++ + IL+A +LG YNGHASLLPRWRGAAP
Sbjct: 61 FTPKSLKGAEEQDVFASLEADVAIVVAYGLLLSKAILDAPRLGCYNGHASLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETG+ IMKMD+ LDTGPVA KV I+ ++ L LS++ A M+ A
Sbjct: 121 IQRAIMAGDAETGMMIMKMDEGLDTGPVAMAEKVAITPDMTAGELHDRLSMIGADLMIRA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ +L L PQ E G+TYA KI K E R+++ + A+ VHN IR LSPFPGAW EM I
Sbjct: 181 LGALERESLALQPQAEEGVTYAAKIDKAEARIDWSKPAKEVHNSIRGLSPFPGAWCEMEI 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KL S L EG G PG V++ TIAC +GAVR+ LQR+GG+ L +FL G
Sbjct: 241 NGAVERVKLQRSTLGEGSGAPGTVLDDRLTIACGEGAVRLAMLQRSGGKPLPAQEFLRGQ 300
Query: 302 PVII 305
V
Sbjct: 301 RVTK 304
>gi|209886649|ref|YP_002290506.1| methionyl-tRNA formyltransferase [Oligotropha carboxidovorans OM5]
gi|229487504|sp|B6JJP7|FMT_OLICO RecName: Full=Methionyl-tRNA formyltransferase
gi|209874845|gb|ACI94641.1| methionyl-tRNA formyltransferase [Oligotropha carboxidovorans OM5]
Length = 310
Score = 203 bits (515), Expect = 4e-50, Method: Composition-based stats.
Identities = 149/306 (48%), Positives = 199/306 (65%), Gaps = 2/306 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++FMGT +FAV TL+ L + H I +VYT+ +PAG RG+K ++ V K A+E L
Sbjct: 1 MPLRLIFMGTPDFAVPTLRELHAQGHEIAAVYTRAAKPAG-RGMKLQITPVEKAARELGL 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P+ E +F + NAD AVVVAYG+++P ILNA G +N HASLLPRWRGA
Sbjct: 60 PVLTPSTLRTPEAEAEFRAHNADAAVVVAYGMILPANILNAVPRGCFNLHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIM GD E+G+ +MKMD LDTG VA ++ I+ + L L+ A M
Sbjct: 120 APIQRAIMTGDAESGVMVMKMDVGLDTGDVAMTDRLQITDAMTAQDLHDALAPRGARLMA 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+AM LEQ +L L PQ E G+TYA KI K E ++++ R A +V HI LSPFPGAW E+
Sbjct: 180 QAMVALEQGSLNLKPQGEEGVTYAAKIGKAEAKIDWARPAHDVLRHIHGLSPFPGAWFEV 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
I RIK+L +LV+G G PG +++ TIAC +GA+R++ +QRAG + + DFL
Sbjct: 240 AIDGAPVRIKVLRCELVKGSGAPGALLDDRLTIACGEGAIRLLDVQRAGKQPMRALDFLR 299
Query: 300 GCPVII 305
G P+I
Sbjct: 300 GTPLIP 305
>gi|258541769|ref|YP_003187202.1| methionyl-tRNA formyl transferase [Acetobacter pasteurianus IFO
3283-01]
gi|256632847|dbj|BAH98822.1| methionyl-tRNA formyl transferase [Acetobacter pasteurianus IFO
3283-01]
gi|256635904|dbj|BAI01873.1| methionyl-tRNA formyl transferase [Acetobacter pasteurianus IFO
3283-03]
gi|256638959|dbj|BAI04921.1| methionyl-tRNA formyl transferase [Acetobacter pasteurianus IFO
3283-07]
gi|256642013|dbj|BAI07968.1| methionyl-tRNA formyl transferase [Acetobacter pasteurianus IFO
3283-22]
gi|256645068|dbj|BAI11016.1| methionyl-tRNA formyl transferase [Acetobacter pasteurianus IFO
3283-26]
gi|256648123|dbj|BAI14064.1| methionyl-tRNA formyl transferase [Acetobacter pasteurianus IFO
3283-32]
gi|256651176|dbj|BAI17110.1| methionyl-tRNA formyl transferase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654167|dbj|BAI20094.1| methionyl-tRNA formyl transferase [Acetobacter pasteurianus IFO
3283-12]
Length = 312
Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats.
Identities = 123/310 (39%), Positives = 185/310 (59%), Gaps = 7/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +F+V L+AL ++ H IV+VY QPPRPAG RG K S V + A+E L
Sbjct: 1 MRLVFMGTPDFSVPALRALHAAGHEIVAVYCQPPRPAG-RGKKLQASPVQQAAEELGLLV 59
Query: 63 LVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + E+ F + AD A+V AYGL++PQ +L+A +LG N HASLLPRWRGA+
Sbjct: 60 RHPLSLRKNEPEWADFAALQADAAIVAAYGLILPQAMLDAPRLGCLNIHASLLPRWRGAS 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI+AGD ++G+ IM+M+ LDTGP+ VPI++ L LS L A
Sbjct: 120 PIQSAILAGDTQSGVTIMQMEAGLDTGPMLLREAVPITATTTATSLHDALSALGADM--- 176
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ + +PQ E G+TYA ++++ + +++ ++A + IRAL+P+PG + +
Sbjct: 177 -ALRVLADMPTPTPQPEEGVTYAPRLTREDGHIDWAKTATEIDRQIRALTPWPGTFTTLP 235
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
G + + +PG V++ TIAC GAVR+ RLQ+ G ++D FL G
Sbjct: 236 DGTVLKIGAATPLPDTKHTAQPGTVLDDALTIACGSGAVRLTRLQKPGRGMMDADAFLRG 295
Query: 301 CPVIIGCIVG 310
P+ G ++G
Sbjct: 296 QPLAAGTLLG 305
>gi|294500983|ref|YP_003564683.1| methionyl-tRNA formyltransferase [Bacillus megaterium QM B1551]
gi|295706331|ref|YP_003599406.1| methionyl-tRNA formyltransferase [Bacillus megaterium DSM 319]
gi|294350920|gb|ADE71249.1| methionyl-tRNA formyltransferase [Bacillus megaterium QM B1551]
gi|294803990|gb|ADF41056.1| methionyl-tRNA formyltransferase [Bacillus megaterium DSM 319]
Length = 312
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 106/313 (33%), Positives = 170/313 (54%), Gaps = 10/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V LQ L+ + +V+V TQP RP G R V +A + +P
Sbjct: 1 MKVVFMGTPDFSVPVLQTLLKDGYEVVAVVTQPDRPKG-RKRVLTPPPVKVEALKHEIPV 59
Query: 63 LVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K+ +EEY+Q L++ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 60 LQPEKIRLEEEYQQVLAYEPDLIVTAAFGQILPTPILEAPKYGCINVHASLLPELRGGAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I +I+ G +TG+ IM M + LD G + +VPI + L +LS A + E
Sbjct: 120 IHYSILQGKPKTGVTIMYMVEKLDAGDILTQVEVPIEERDHVGTLHDKLSAAGAKLLSET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L + + Q ++ T+A I + + ++++ R+ E ++NHIR L P+P A+
Sbjct: 180 IPSLVKGEITPVKQNDDEATFASNIKREQEKIDWARTGEEIYNHIRGLHPWPVAYTT--- 236
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACS-QGAVRIMRLQRAGGRVLDIGDF 297
+ +K+ + V GKPG V++ F +A + A+++ LQ AG + +D +
Sbjct: 237 -ADGQVMKIWWGEKVSASGKPGTVLSLEEDGFIVATGNETAIKVTELQPAGKKRMDAAQY 295
Query: 298 LLGCPVIIGCIVG 310
L G V +G ++G
Sbjct: 296 LRGTSVEVGTVLG 308
>gi|254720139|ref|ZP_05181950.1| methionyl-tRNA formyltransferase [Brucella sp. 83/13]
gi|265985145|ref|ZP_06097880.1| methionyl-tRNA formyltransferase [Brucella sp. 83/13]
gi|306838493|ref|ZP_07471333.1| methionyl-tRNA formyltransferase [Brucella sp. NF 2653]
gi|264663737|gb|EEZ33998.1| methionyl-tRNA formyltransferase [Brucella sp. 83/13]
gi|306406425|gb|EFM62664.1| methionyl-tRNA formyltransferase [Brucella sp. NF 2653]
Length = 306
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 166/304 (54%), Positives = 211/304 (69%), Gaps = 1/304 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT EF+V L A++ + +V+ YTQPPRPAGRRGL+ S VH+KA++F +P
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTRSPVHEKAEQFGIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G EE + F S ADVA+VVAYGL++P+ IL+A +LG YNGHASLLPRWRGAAP
Sbjct: 61 FTPKSLKGAEEQDVFASLEADVAIVVAYGLLLPKAILDAPRLGCYNGHASLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETG+ IMKM++ LDTGPVA KV I+ ++ L LS++ A M+ A
Sbjct: 121 IQRAIMAGDAETGMMIMKMNEGLDTGPVAMAEKVAITPDMTAGELHDRLSMIGADLMIRA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ +L L PQ E G+TYA KI K E R+++ + A+ VHN IR LSPFPGAW EM I
Sbjct: 181 LGALERESLALQPQAEEGVTYAAKIDKAEARIDWSKPAKEVHNSIRGLSPFPGAWCEMEI 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KL S L EG G PG V++ TIAC +GAVR+ LQR+GG+ L +FL G
Sbjct: 241 NGAVERVKLQRSTLGEGSGAPGTVLDDRLTIACGEGAVRLAMLQRSGGKPLPAQEFLRGQ 300
Query: 302 PVII 305
V
Sbjct: 301 RVTK 304
>gi|149185873|ref|ZP_01864188.1| methionyl-tRNA formyltransferase [Erythrobacter sp. SD-21]
gi|148830434|gb|EDL48870.1| methionyl-tRNA formyltransferase [Erythrobacter sp. SD-21]
Length = 302
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 137/308 (44%), Positives = 189/308 (61%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMG+ EFAV TLQALV ++H +V VYTQPPRP GRRG + + VH+ A+ S+
Sbjct: 1 MRIIFMGSPEFAVPTLQALVDAAHEVVCVYTQPPRPGGRRGKELTKTPVHQLAEHLSIEV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
PT EE E+F S ADV V+ AYGL++PQ +L+A K G N HASLLP WRGAAP
Sbjct: 61 RHPTSLKSAEEQEKFASLQADVGVIAAYGLILPQAVLDAPKHGCLNVHASLLPHWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I R+IMAGD TG+ IM+M+ LDTGP+ + P+ ++ + +
Sbjct: 121 IHRSIMAGDEVTGVTIMQMEAGLDTGPMLATVRTPVEDKTTGELTEELAELGAQLMVGTL 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + L Q ++ TYA+KI K E R++F R AE V +HI LSPFPGAW E+
Sbjct: 181 ID---PDALHAVEQDDSEATYAKKIDKAEARIDFSRPAEEVVHHIHGLSPFPGAWSEVNG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
R+K+L +++ EG G+ G VI+ + TIAC GA+R +RLQRAG +D +F G
Sbjct: 238 A----RVKILRAEVSEGAGEAGSVIDDDLTIACGDGAIRPLRLQRAGKPAMDRTEFQRGN 293
Query: 302 PVIIGCIV 309
+ G +
Sbjct: 294 AIEKGATL 301
>gi|148558246|ref|YP_001257945.1| methionyl-tRNA formyltransferase [Brucella ovis ATCC 25840]
gi|166214879|sp|A5VVU0|FMT_BRUO2 RecName: Full=Methionyl-tRNA formyltransferase
gi|148369531|gb|ABQ62403.1| methionyl-tRNA formyltransferase [Brucella ovis ATCC 25840]
Length = 306
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 167/304 (54%), Positives = 211/304 (69%), Gaps = 1/304 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT EF+V L A++ + +V+ YTQPPRPAGRRGL+ S VH+KA++F +P
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTRSPVHEKAEQFGIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G EE + F S ADVA+VVAYGL++P+ IL+A +LG YNGHASLLPRWRGAAP
Sbjct: 61 FTPKSLKGAEEQDVFASLEADVAIVVAYGLLLPKAILDAPRLGCYNGHASLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETG+ IMKMD+ LDTGPVA KV I+ ++ L LSV+ A M+ A
Sbjct: 121 IQRAIMAGDAETGMMIMKMDEGLDTGPVAMAEKVAITPDMTAGELHDRLSVIGADLMIRA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ +L L PQ E G+TYA KI K E R+++ + A++VHN IR LSPFPGAW EM I
Sbjct: 181 LGALERESLALQPQAEEGVTYAAKIDKAEARIDWSKPAKDVHNSIRGLSPFPGAWCEMEI 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KL S L EG G PG V++ IAC +GAVR+ LQR+GG+ L +FL G
Sbjct: 241 NGAVERVKLQRSTLGEGSGAPGTVLDDRLMIACGEGAVRLATLQRSGGKPLPAQEFLRGQ 300
Query: 302 PVII 305
V
Sbjct: 301 RVTK 304
>gi|75677244|ref|YP_319665.1| methionyl-tRNA formyltransferase [Nitrobacter winogradskyi Nb-255]
gi|123731940|sp|Q3SN28|FMT_NITWN RecName: Full=Methionyl-tRNA formyltransferase
gi|74422114|gb|ABA06313.1| methionyl-tRNA formyltransferase [Nitrobacter winogradskyi Nb-255]
Length = 314
Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats.
Identities = 150/310 (48%), Positives = 196/310 (63%), Gaps = 6/310 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++FMGT +FAV TLQ LV+ H I +VYT+ RPAG RG+K + V ++AQ L
Sbjct: 1 MPLRLIFMGTPDFAVPTLQQLVAHGHEIAAVYTREARPAG-RGMKLQPTPVAREAQRLGL 59
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P L +E + S+ AD AVVVAYGL++PQ IL+A + G YN HASLLPRWRGA
Sbjct: 60 PVLTPKTLKTQESQDQLRSYGADAAVVVAYGLILPQAILDAPRYGCYNLHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API RA+MAGD E+G+ +MK+D LDTG VA +VPI+ + + L L+ L A M
Sbjct: 120 APINRAVMAGDAESGVMVMKIDAGLDTGDVAMAERVPITDAMTASDLHDTLAPLGADLMA 179
Query: 180 EAMDKLEQNNLPLSPQIE----NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
AMD LE+ L L+ Q E + +TYA KI K E + + A V HI LSPFPGA
Sbjct: 180 RAMDALERGELRLTKQSEQGVASTVTYAAKIDKAEAHIVWSNPAREVLRHIHGLSPFPGA 239
Query: 236 WLEMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
W EM + + RIK+L +L EG G PG++++ TIAC GA+R++ LQRAG +
Sbjct: 240 WCEMPVDGEAVRIKILRCELAEGAGSPGDLLDDRLTIACKDGAIRVLELQRAGKPPMKAA 299
Query: 296 DFLLGCPVII 305
FL G P+
Sbjct: 300 AFLNGTPLTP 309
>gi|167855266|ref|ZP_02478035.1| methionyl-tRNA formyltransferase [Haemophilus parasuis 29755]
gi|167853630|gb|EDS24875.1| methionyl-tRNA formyltransferase [Haemophilus parasuis 29755]
Length = 316
Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 122/315 (38%), Positives = 184/315 (58%), Gaps = 8/315 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL++S H++++VYTQP +PAG RG K S V + A+ +P
Sbjct: 3 KLNIIFAGTPDFAATHLQALLNSEHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEAHHIP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E + + NADV VVVAYGL++P+ +L A K G N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKEEAQAELQALNADVMVVVAYGLILPEAVLKAPKYGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + PI + +A L +L+ L A++E
Sbjct: 122 PIQRSIWAGDTETGVTIMQMDIGLDTGDMLHKVTTPILATETSASLYAKLAELAPPALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L Q + YAEK++K E ++++ +A + +IRA +P P A+L +M
Sbjct: 182 VLNGLTSGQFKPEKQQDEQANYAEKLTKEEAKLDWNMTACQLERNIRAFNPAPMAYLTLM 241
Query: 241 IGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ERIK+ +++++ + K G V+ IA QG + I +LQ AG + + + D
Sbjct: 242 VNEVEERIKVYQAEVLPHQEKTVGTVLAVDKNGIQIATQQGVLNITQLQPAGKKPMSVQD 301
Query: 297 FLLGCP--VIIGCIV 309
FL G +G ++
Sbjct: 302 FLNGRGDWFKVGSVL 316
>gi|294853987|ref|ZP_06794659.1| methionyl-tRNA formyltransferase [Brucella sp. NVSL 07-0026]
gi|294819642|gb|EFG36642.1| methionyl-tRNA formyltransferase [Brucella sp. NVSL 07-0026]
Length = 306
Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 167/304 (54%), Positives = 213/304 (70%), Gaps = 1/304 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT EF+V L A++ + +V+ YTQPPRPAGRRGL+ S VH+KA++F +P
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTRSPVHEKAEQFGIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G EE + F S ADVA+VVAYGL++P+ IL+A +LG YNGHASLLPRWRGAAP
Sbjct: 61 FTPKSLKGAEEQDVFASLEADVAIVVAYGLLLPKAILDAPRLGCYNGHASLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETG+ IMKMD+ LDTGPVA KV I+ ++ L LS++ A M+ A
Sbjct: 121 IQRAIMAGDAETGMMIMKMDEGLDTGPVAMAEKVAITPDMTAGELHDRLSMIGADLMIRA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ +L L PQ E G+TYA KI K + R+++ + A++VHN IR LSPFPGAW EM I
Sbjct: 181 LGALERESLALQPQAEEGVTYAAKIDKAKARIDWSKPAKDVHNSIRGLSPFPGAWCEMEI 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KL S L EG G PG V++ TIACS+GAVR+ LQR+GG+ L +FL G
Sbjct: 241 NGAVERVKLQRSTLGEGSGAPGTVLDDRLTIACSEGAVRLATLQRSGGKPLPAQEFLRGQ 300
Query: 302 PVII 305
V
Sbjct: 301 RVTK 304
>gi|331091586|ref|ZP_08340422.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
2_1_46FAA]
gi|330403613|gb|EGG83169.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
2_1_46FAA]
Length = 309
Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 104/314 (33%), Positives = 170/314 (54%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT +F+V TL+ L+ + H +V TQP +P G RG + + V + A + +P
Sbjct: 1 MRVIFMGTPDFSVGTLEELIHAGHEVVLAVTQPDKPKG-RGKEMQFTPVKEVALQHGIPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ E + + ADV VVVA+G ++P+ IL T G N HASLLP++RGAAP
Sbjct: 60 FQPKKIRDAESIEKLREYPADVMVVVAFGQIVPKEILEMTPYGCINVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ +++ G++ TG+ M+MD+ LDTG + ++PIS L +L+ A VE
Sbjct: 120 IQWSLIDGESVTGVTTMQMDEGLDTGDMLLKTEIPISPKETGGSLHDKLAEAGAKLCVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ + Q E YA + K +++ + A + IR L+P+P A+
Sbjct: 180 LKALEEKTVTGEKQGETPTAYARMLDKKLGNIDWSKGAAEIERLIRGLNPWPSAYT---- 235
Query: 242 GNKHERIKLLESQLVEG--EGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + +K+ E+++ EG E +PG V+ F + G ++I +LQ G + ++ G
Sbjct: 236 MWEGKVMKIWEAEIFEGQKENEPGTVVKVEKDGFFVQTGNGLLKITQLQIPGKKRMEAGA 295
Query: 297 FLLGCPVIIGCIVG 310
FL G + +G
Sbjct: 296 FLRGYSIKEQTKLG 309
>gi|152977799|ref|YP_001343428.1| methionyl-tRNA formyltransferase [Actinobacillus succinogenes 130Z]
gi|171472916|sp|A6VKJ6|FMT_ACTSZ RecName: Full=Methionyl-tRNA formyltransferase
gi|150839522|gb|ABR73493.1| methionyl-tRNA formyltransferase [Actinobacillus succinogenes 130Z]
Length = 317
Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 121/317 (38%), Positives = 189/317 (59%), Gaps = 9/317 (2%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQAL++S+H++++VYTQP +PAG RG K S V + AQ+ +
Sbjct: 1 MKNLNIIFAGTPDFAAQHLQALLASNHNVIAVYTQPDKPAG-RGKKLQASPVKQLAQQHN 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP P +E + + NADV VVVAYGL++P+ +L A +LG N H S+LPRWRG
Sbjct: 60 LPVYQPKSLRNEEAQSELAALNADVMVVVAYGLILPKAVLEAPRLGCLNVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQRAI AGD +TG+ +M+M++ LDTG + I+ +A L Q+L+ L A+
Sbjct: 120 AAPIQRAIWAGDKQTGVTVMQMNEGLDTGDMLHKVYCEITPQETSATLYQKLAQLAPSAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+E +D LE + Q ++ YA+K++K E ++++ A + +IRA +P P A+L
Sbjct: 180 IEVLDHLEDGSFQPQVQDDSQSCYADKLTKEEAKLDWTLPAAQLERNIRAFNPAPTAFLT 239
Query: 239 MMIGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ + ERIK+ ++ ++ + K G V+ IA + G + I RLQ +G + + +
Sbjct: 240 LNLNGNEERIKIYQADVLPHQEKAAGTVLACDKKGVQIATADGVLNITRLQPSGKKPMSV 299
Query: 295 GDFLLGCP--VIIGCIV 309
DFL G G ++
Sbjct: 300 QDFLNGRADWFQAGNVL 316
>gi|260432737|ref|ZP_05786708.1| methionyl-tRNA formyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416565|gb|EEX09824.1| methionyl-tRNA formyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 306
Score = 202 bits (513), Expect = 7e-50, Method: Composition-based stats.
Identities = 155/308 (50%), Positives = 195/308 (63%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT EF+V L+ALV + H I +VY QPPRPAG RG K + VH +A+ LP
Sbjct: 1 MRVIFMGTPEFSVPVLEALVQAGHEIAAVYCQPPRPAG-RGKKDRPTPVHARAEALGLPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
PT L E + + DVAVVVAYGL++PQ IL+A + G N HASLLPRWRGAAP
Sbjct: 60 RHPTSLKSPEEQAAFAGLQADVAVVVAYGLILPQPILDAPRHGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD ETGI IM+M+ LDTGPV + PI TA L LS + A +V+A
Sbjct: 120 IHRAIMAGDAETGICIMQMEAGLDTGPVLLRQATPIGPEETTAQLHDRLSAMGADLIVQA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D+L + PQ E G+TYA KI K E RV++ R A V IR LSPFPGAW ++
Sbjct: 180 LDRLPEL--TPEPQPEVGVTYAAKIDKAEARVDWSRPAVEVDRQIRGLSPFPGAWTQIEG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KLL S+L +G+G PGEV++ +AC GAV ++RLQRAG D FL G
Sbjct: 238 ----ERVKLLASRLSDGQGVPGEVLDDALRVACGTGAVELLRLQRAGKAAQDRETFLRGW 293
Query: 302 PVIIGCIV 309
P+ G +
Sbjct: 294 PIPAGTRL 301
>gi|157372745|ref|YP_001480734.1| methionyl-tRNA formyltransferase [Serratia proteamaculans 568]
gi|166988370|sp|A8GKG6|FMT_SERP5 RecName: Full=Methionyl-tRNA formyltransferase
gi|157324509|gb|ABV43606.1| methionyl-tRNA formyltransferase [Serratia proteamaculans 568]
Length = 314
Score = 202 bits (512), Expect = 7e-50, Method: Composition-based stats.
Identities = 114/316 (36%), Positives = 178/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K S V A++ LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHQIVGVFTQPDRPAG-RGNKLTPSPVKVLAEQHHLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE + ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPKSLRPEENQHLVADLNADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD+ETG+ IM+MD LDTG + PI ++ +A L +L+ L M+
Sbjct: 123 PIQRSLWAGDHETGVTIMQMDVGLDTGDMMHKIACPIEADDTSASLYDKLAQLGPQGMLT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ Q E+ +TYAEK+SK E R+++ A + +RA +P+P ++ +
Sbjct: 183 TLQQMAAGTAKREVQDESLVTYAEKLSKEEARLDWNLPAVQLERCVRAFNPWPVSYFTID 242
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++ + +PG +I +A ++G + + +LQ AG + +
Sbjct: 243 D----QPVKVWQATVLAQNADAEPGTIIHADKHGIQVATAEGILNLTQLQPAGKKPMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 299 DLLNSRREWFTPGNRL 314
>gi|225569234|ref|ZP_03778259.1| hypothetical protein CLOHYLEM_05316 [Clostridium hylemonae DSM
15053]
gi|225162033|gb|EEG74652.1| hypothetical protein CLOHYLEM_05316 [Clostridium hylemonae DSM
15053]
Length = 309
Score = 202 bits (512), Expect = 8e-50, Method: Composition-based stats.
Identities = 102/314 (32%), Positives = 169/314 (53%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT +F+V T +AL+ + H IV TQP +P G RG K S V + A ++ +P
Sbjct: 1 MKIIFMGTPDFSVGTFEALIEAGHEIVLAVTQPDKPKG-RGGKMQYSPVKETALKYGIPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ Q E + + AD+ VV+A+G ++P+ IL T G N HASLLP++RGAAP
Sbjct: 60 FQPKKVRQAECIEELRRYGADIMVVIAFGQILPKEILEMTPYGCVNVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G++ +G+ M+MD+ LDTG + ++V + L +LS A VE
Sbjct: 120 IQWAVINGEDVSGVTTMQMDEGLDTGDMILKKEVVLDEKETGGSLFDKLSAAGAVLCVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ + Q E YA + K +++ + A+ + IR L+P+P A+
Sbjct: 180 LKALEEGSASFEKQGETTTEYARMLDKDMGSIDWKKDAQTIERLIRGLNPWPSAYTR--- 236
Query: 242 GNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ E+ +V + PG V+ F + G +++ LQ G + ++ G
Sbjct: 237 -WDDKVMKIWEADVVAQNTQTLPGTVVSVEKDGFCVQTGDGLLKVRSLQIPGKKRMEAGA 295
Query: 297 FLLGCPVIIGCIVG 310
FL G + GC +G
Sbjct: 296 FLRGYKIEKGCELG 309
>gi|254421156|ref|ZP_05034880.1| methionyl-tRNA formyltransferase [Brevundimonas sp. BAL3]
gi|196187333|gb|EDX82309.1| methionyl-tRNA formyltransferase [Brevundimonas sp. BAL3]
Length = 307
Score = 202 bits (512), Expect = 8e-50, Method: Composition-based stats.
Identities = 130/309 (42%), Positives = 176/309 (56%), Gaps = 3/309 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ FMGT +FAV +L L++S H IV+VY+QPPRP G RG K S VH A+ LP
Sbjct: 1 MRLAFMGTPDFAVPSLAELLASGHEIVAVYSQPPRPRG-RGQKLTPSPVHAFAETMGLPV 59
Query: 63 LVPTKLGQEEYE-QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + E F S + D A VVAYG ++ +L A +LG N H SLLPRWRGAAP
Sbjct: 60 FTPDSMKAPEAVADFQSLDLDAACVVAYGQILNAEVLAAPRLGCLNLHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETG+ IM+M LD GP+ + I + A L + ++ + A A
Sbjct: 120 IQRAIMAGDAETGVQIMQMSLGLDEGPILLGEVMDIRPDDTAASLSERMAHVGAGLWPRA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +++ + + Q+ A KI+ E R+++ R A V HIR LSPFPGAW E
Sbjct: 180 LAAIDRGGVTPTEQVGEPTY-ARKITPAEARIDWTRPAAEVDAHIRGLSPFPGAWFEAPS 238
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
RIK L S L +G G PG V++ T+AC GAVR++R+QR G + L G
Sbjct: 239 EAGPVRIKALLSALADGSGAPGAVLDDALTVACGTGAVRLIRVQREGKAAQSAEEMLRGF 298
Query: 302 PVIIGCIVG 310
+ G ++G
Sbjct: 299 ALPAGTVLG 307
>gi|90419799|ref|ZP_01227708.1| methionyl-tRNA formyltransferase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335840|gb|EAS49588.1| methionyl-tRNA formyltransferase [Aurantimonas manganoxydans
SI85-9A1]
Length = 319
Score = 202 bits (512), Expect = 8e-50, Method: Composition-based stats.
Identities = 148/317 (46%), Positives = 184/317 (58%), Gaps = 7/317 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LRVVFMGT F+V TL AL ++ H IV+VYTQPPR AGRRGL S V +A+ L
Sbjct: 1 MALRVVFMGTPAFSVPTLAALAAAGHDIVAVYTQPPRKAGRRGLTLTPSPVQLEAERLGL 60
Query: 61 PALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P + E F + + DVAVVVAYGL++PQ +L+ + G NGH SLLPRWRGA
Sbjct: 61 PVRAPLNFKDAADREAFAALDCDVAVVVAYGLLLPQAVLDMPRRGCLNGHGSLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD ETG+ +M+M+ LDTGPVA + PI++ TA L L+ +CA MV
Sbjct: 121 APIQRAIEAGDAETGMMVMRMEAGLDTGPVALTTETPIAATDTTADLHDRLAEICATLMV 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETR------VNFCRSAENVHNHIRALSPFP 233
EA+DKLE L Q ++F A + I A SPFP
Sbjct: 181 EALDKLEAGTLAFEDQDSIAARTGRAPIYAAKIDKAEAALDFTGDASGIARRINAFSPFP 240
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLD 293
GAW M G ER+KLL + G+G PG +++ IAC GAVRI+ LQRAGGR +
Sbjct: 241 GAWTMMSFGGAPERVKLLRAAAETGDGAPGTLLDDRLLIACGTGAVRILELQRAGGRRMS 300
Query: 294 IGDFLLGCPVIIGCIVG 310
+ L G PV G G
Sbjct: 301 AEELLKGTPVPAGGRAG 317
>gi|307690636|ref|ZP_07633082.1| methionyl-tRNA formyltransferase [Clostridium cellulovorans 743B]
Length = 310
Score = 202 bits (512), Expect = 8e-50, Method: Composition-based stats.
Identities = 102/315 (32%), Positives = 166/315 (52%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT EFAV +L+AL+ + +++ V+TQP RP G RG K +S V + A E +P
Sbjct: 1 MNIVFMGTPEFAVPSLKALIDN-FNVIGVFTQPDRPKG-RGKKLGISPVKEVALEHGIPV 58
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL +E D +VVAYG ++ + +L+ K N H SLLP++RGAA
Sbjct: 59 YQPEKLRKETDFVDKLKEIKPDYIIVVAYGQILSKEVLDIPKYACINLHGSLLPKFRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ +++ G+ TG M MD LDTG + KV I+ + L + A +V+
Sbjct: 119 PIQWSVIKGEKVTGNTTMLMDVGLDTGDMLLTDKVEITDYMTAGQLHDLMMESGAELLVK 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+++ N+ Q ++ YA +SK + + +A N+HN IR L+P+P A+
Sbjct: 179 TINEYTLGNITGIKQDDSQSCYASMLSKEIALIKWDDTAANIHNLIRGLNPWPIAFTNYQ 238
Query: 241 IGNKHERIKLLESQLVEGE------GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+K+ ES++++ E GK +V +A +G +R+ +Q G + L +
Sbjct: 239 G----VVMKIYESEVLKNEASSNECGKILKVSKDGIDVATKEGILRLKTVQFPGKKPLKV 294
Query: 295 GDFLLGCPVIIGCIV 309
+F+ G + IG I+
Sbjct: 295 EEFIKGNKLEIGVIL 309
>gi|302874749|ref|YP_003843382.1| methionyl-tRNA formyltransferase [Clostridium cellulovorans 743B]
gi|302577606|gb|ADL51618.1| methionyl-tRNA formyltransferase [Clostridium cellulovorans 743B]
Length = 314
Score = 202 bits (512), Expect = 8e-50, Method: Composition-based stats.
Identities = 102/315 (32%), Positives = 166/315 (52%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT EFAV +L+AL+ + +++ V+TQP RP G RG K +S V + A E +P
Sbjct: 5 MNIVFMGTPEFAVPSLKALIDN-FNVIGVFTQPDRPKG-RGKKLGISPVKEVALEHGIPV 62
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL +E D +VVAYG ++ + +L+ K N H SLLP++RGAA
Sbjct: 63 YQPEKLRKETDFVDKLKEIKPDYIIVVAYGQILSKEVLDIPKYACINLHGSLLPKFRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ +++ G+ TG M MD LDTG + KV I+ + L + A +V+
Sbjct: 123 PIQWSVIKGEKVTGNTTMLMDVGLDTGDMLLTDKVEITDYMTAGQLHDLMMESGAELLVK 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+++ N+ Q ++ YA +SK + + +A N+HN IR L+P+P A+
Sbjct: 183 TINEYTLGNITGIKQDDSQSCYASMLSKEIALIKWDDTAANIHNLIRGLNPWPIAFTNYQ 242
Query: 241 IGNKHERIKLLESQLVEGE------GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+K+ ES++++ E GK +V +A +G +R+ +Q G + L +
Sbjct: 243 G----VVMKIYESEVLKNEASSNECGKILKVSKDGIDVATKEGILRLKTVQFPGKKPLKV 298
Query: 295 GDFLLGCPVIIGCIV 309
+F+ G + IG I+
Sbjct: 299 EEFIKGNKLEIGVIL 313
>gi|315635056|ref|ZP_07890337.1| methionyl-tRNA formyltransferase [Aggregatibacter segnis ATCC
33393]
gi|315476318|gb|EFU67069.1| methionyl-tRNA formyltransferase [Aggregatibacter segnis ATCC
33393]
Length = 318
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 177/316 (56%), Gaps = 9/316 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL++SSH++++VYTQP +PAG RG K S V + A++ +P
Sbjct: 3 PLNIIFAGTPDFAAQHLQALLNSSHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEQHQIP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E + + ADV VVVAYGL++PQ +L+A G N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKPEAQSELCALYADVMVVVAYGLILPQAVLDAPTYGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD TG+ IM+MD LDTG + I + L +L+ A+++
Sbjct: 122 PIQRSIWAGDTRTGVTIMQMDAGLDTGDMLHKVYCDILPTETSTSLYNKLAEFAPSALID 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D L Q + YA+K+SK E ++N+ SA + +IRA +P+P A+LE+M
Sbjct: 182 VLDNLGTGKFTAEKQDDTQSNYADKLSKEEAKLNWQLSAAQLERNIRAFNPWPMAYLELM 241
Query: 241 I-GNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
N + +K+ ++ ++ PG ++ IA + G + +++LQ AG + +
Sbjct: 242 DGQNNPQTLKVYQATVLPHVNKTPGTILAADKQGIQIATADGVLNLLQLQPAGKKPMSAQ 301
Query: 296 DFLLGCP--VIIGCIV 309
D L G +G ++
Sbjct: 302 DLLNGRADWFQVGKVL 317
>gi|86747800|ref|YP_484296.1| methionyl-tRNA formyltransferase [Rhodopseudomonas palustris HaA2]
gi|123293210|sp|Q2J2C5|FMT_RHOP2 RecName: Full=Methionyl-tRNA formyltransferase
gi|86570828|gb|ABD05385.1| methionyl-tRNA formyltransferase [Rhodopseudomonas palustris HaA2]
Length = 312
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 151/309 (48%), Positives = 203/309 (65%), Gaps = 2/309 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR+VFMGT +FAV TL AL + H I +VY++ P+PAG RG+K S V ++AQ +
Sbjct: 1 MPLRLVFMGTPDFAVPTLLALSAYGHDIAAVYSREPKPAG-RGMKLQHSPVAQEAQRLGI 59
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P L +E +F S AD AVVVAYG+++PQ IL+A KLG YN H SLLPRWRGA
Sbjct: 60 PVLTPKTLRTDEALAEFRSHEADAAVVVAYGMILPQAILDAPKLGCYNLHGSLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ RAIMAGD E+G+ +MKMD LDTG VA ++ I+ + L L+ L A MV
Sbjct: 120 APLNRAIMAGDAESGVMVMKMDVGLDTGDVAMAERIAITDAMTVTDLHDALARLGADLMV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
AM LE+ L L+ Q E+G++YA KI K E +++F R A+ V HI LSPFPGAW E+
Sbjct: 180 RAMAALERGGLQLARQSEHGVSYAAKIDKAEAKIDFARPAQAVLRHIHGLSPFPGAWCEL 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
I + R+K+L L +G G PGE++ + TIAC+ GA+R+++LQRAG + + +FL
Sbjct: 240 PIDGEAVRVKILRCALADGRGAPGEMLGDDLTIACADGAIRVLQLQRAGKQPMSADEFLR 299
Query: 300 GCPVIIGCI 308
G P+ G
Sbjct: 300 GTPIAKGVR 308
>gi|254690652|ref|ZP_05153906.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 6 str. 870]
gi|256255834|ref|ZP_05461370.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 9 str. C68]
gi|260756223|ref|ZP_05868571.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 6 str. 870]
gi|260882047|ref|ZP_05893661.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 9 str. C68]
gi|297249203|ref|ZP_06932904.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 5 str.
B3196]
gi|260676331|gb|EEX63152.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 6 str. 870]
gi|260871575|gb|EEX78644.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 9 str. C68]
gi|297173072|gb|EFH32436.1| methionyl-tRNA formyltransferase [Brucella abortus bv. 5 str.
B3196]
Length = 306
Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats.
Identities = 167/299 (55%), Positives = 212/299 (70%), Gaps = 1/299 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT EF+V L A++ + +V+ YTQPPRPAGRRGL+ S VH+KA++F +P
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTRSPVHEKAEQFGIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
PT G EE + F S ADVA+VVAYGL++P+ IL+A +LG YNGHASLLPRWRGAAP
Sbjct: 61 FTPTSLKGAEEQDVFASLEADVAIVVAYGLLLPKAILDAPRLGCYNGHASLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETG+ IMKMD+ LDTGPVA KV I+ ++ L LS++ A M+ A
Sbjct: 121 IQRAIMAGDAETGMMIMKMDEGLDTGPVAMAEKVAITPDMTAGELHDRLSMIGADLMIRA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ +L L PQ E G+TYA KI K E R+++ + A++VHN IR LSPFPGAW EM I
Sbjct: 181 LGALERESLALQPQAEEGVTYAAKIDKAEARIDWSKPAKDVHNSIRGLSPFPGAWCEMEI 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
ER+KL S L EG G PG V++ TIAC +GAVR+ LQR+GG+ L +FL G
Sbjct: 241 NGAVERVKLQRSTLGEGSGAPGTVLDDRLTIACGEGAVRLATLQRSGGKPLPAQEFLRG 299
>gi|254705510|ref|ZP_05167338.1| methionyl-tRNA formyltransferase [Brucella pinnipedialis
M163/99/10]
gi|261312914|ref|ZP_05952111.1| methionyl-tRNA formyltransferase [Brucella pinnipedialis
M163/99/10]
gi|261301940|gb|EEY05437.1| methionyl-tRNA formyltransferase [Brucella pinnipedialis
M163/99/10]
Length = 306
Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 166/304 (54%), Positives = 211/304 (69%), Gaps = 1/304 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT EF+V L A++ + +V+ YTQPPRPAGRRGL+ S VH+KA++F +P
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTRSPVHEKAEQFGIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G EE + F S ADVA+VVAYGL++P+ IL+A +LG YNGHASLLPRWRGAAP
Sbjct: 61 FTPKSLKGAEEQDVFASLEADVAIVVAYGLLLPKAILDAPRLGCYNGHASLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETG+ IMKMD+ LDTGPVA KV I+ ++ L LS++ A M+ A
Sbjct: 121 IQRAIMAGDAETGMMIMKMDEGLDTGPVAMAEKVAITPDMTAGELHDRLSMIGADLMIRA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ +L L PQ E G+TYA KI K E R+++ + A++VHN IR LSPFPGAW EM I
Sbjct: 181 LGALERESLALQPQAEEGVTYAAKIDKAEARIDWSKPAKDVHNSIRGLSPFPGAWCEMEI 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KL S L EG G PG V++ TIAC +GAVR+ LQR+GG+ L + L G
Sbjct: 241 NGAVERVKLQRSTLGEGSGAPGTVLDDRLTIACGEGAVRLATLQRSGGKPLPAQELLRGQ 300
Query: 302 PVII 305
V
Sbjct: 301 RVTK 304
>gi|323701800|ref|ZP_08113471.1| methionyl-tRNA formyltransferase [Desulfotomaculum nigrificans DSM
574]
gi|323533336|gb|EGB23204.1| methionyl-tRNA formyltransferase [Desulfotomaculum nigrificans DSM
574]
Length = 318
Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 111/315 (35%), Positives = 174/315 (55%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+V+MGT +FAV +L+AL++ H IV+V TQP +P G RG + V A E +LP
Sbjct: 1 MRIVYMGTPDFAVTSLKALLAVGHQIVAVVTQPDKPKG-RGKQVQPPPVKVLALEHNLPV 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L PT + E+ +Q + D VVVAYG ++P ILN G N HASLLP +RG+AP
Sbjct: 60 LQPTSIKTVEFLQQLQALEPDCIVVVAYGKILPPAILNLPPKGCINVHASLLPYYRGSAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G+ ETG+ M M++ +DTG + + + I N + L+ L A A+VE
Sbjct: 120 IHWAVINGERETGVTTMFMNEGMDTGDMILKKSLAIGPEDNVGLVHDRLAHLGAEALVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ LEQN P PQ + TYA + K +++ R A ++HNH+R + P+PGA+
Sbjct: 180 IELLEQNKAPRIPQDHSAATYAPMLHKEHEEIHWDRPAVSIHNHVRGMDPWPGAFTT--- 236
Query: 242 GNKHERIKLLESQLVEGEG---KPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + +K+ ++L + PG V+ + +G + I LQ G R +
Sbjct: 237 -WQGKVLKIWRTKLTDRHDLPVSPGTVVESLTDGLLVQTGEGQLLITELQLQGSRRMGFS 295
Query: 296 DFLLGCPVIIGCIVG 310
+FL G ++ G ++G
Sbjct: 296 EFLRGKKIMPGTVLG 310
>gi|91974562|ref|YP_567221.1| methionyl-tRNA formyltransferase [Rhodopseudomonas palustris BisB5]
gi|123722271|sp|Q13F19|FMT_RHOPS RecName: Full=Methionyl-tRNA formyltransferase
gi|91681018|gb|ABE37320.1| methionyl-tRNA formyltransferase [Rhodopseudomonas palustris BisB5]
Length = 310
Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 151/310 (48%), Positives = 205/310 (66%), Gaps = 2/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR+VFMGT +FAV TL AL + H I +VY++ P+PAG RG+K S V ++AQ F +
Sbjct: 1 MPLRLVFMGTPDFAVPTLLALSAYGHDIAAVYSREPKPAG-RGMKLQHSPVAQEAQRFGI 59
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P L +E +F S +AD AVVVAYG+++PQ IL+A +LG YN H SLLPRWRGA
Sbjct: 60 PVLTPKTLKTDEALAEFRSHDADAAVVVAYGMILPQAILDAPRLGCYNLHGSLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ RAIMAGD E+G+ +MKMD LDTG VA ++ I+ + L L+ L A MV
Sbjct: 120 APLNRAIMAGDAESGVMVMKMDAGLDTGDVAMAERIAITDAMTVTDLHDSLARLGADLMV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
AM LE++ L L+ Q E+G+TYA KI K E +++F R A+ V HI LSPFPGAW E+
Sbjct: 180 RAMAALERDQLQLTRQSEHGVTYAAKIDKAEAKIDFARPAQAVLRHIHGLSPFPGAWCEL 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
I + R+K+L G G PG+V++ TIAC GA+R+++LQRAG + + +FL
Sbjct: 240 PIDGEAVRVKILRCASATGGGAPGQVLDDRLTIACQDGAIRVLQLQRAGKQPMQADEFLR 299
Query: 300 GCPVIIGCIV 309
G P+ G ++
Sbjct: 300 GTPIAAGAVI 309
>gi|307943160|ref|ZP_07658505.1| methionyl-tRNA formyltransferase [Roseibium sp. TrichSKD4]
gi|307773956|gb|EFO33172.1| methionyl-tRNA formyltransferase [Roseibium sp. TrichSKD4]
Length = 313
Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 147/314 (46%), Positives = 206/314 (65%), Gaps = 5/314 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+LR++FMGT EF+V TL ++ H +V+ Y+QPPRPAG RG+ S VH+ A+ +
Sbjct: 1 MSLRIIFMGTPEFSVPTLMEIIGQGHEVVTCYSQPPRPAG-RGMDLKKSPVHEAAESVGI 59
Query: 61 PALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P PT L + + DVAVVVAYGL++P+ +L+A + G N HASLLPRWRGA
Sbjct: 60 PVFTPTSLKDPTEQAAFADLDADVAVVVAYGLLLPKVVLDAPRDGCLNLHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API RAIMAGD ETGI +M+M++ LDTGP+ + I N+ L LS L MV
Sbjct: 120 APINRAIMAGDAETGIQVMRMEEGLDTGPIGMSETLSIDPNMTAGELHDRLSALGGDLMV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
A+ L + L +PQ G+TYA K++K ETR+++ +SA NVHNHIR LSPFPGAW E+
Sbjct: 180 RALAALSRGALGFTPQDAEGVTYASKLAKSETRIDWTQSASNVHNHIRGLSPFPGAWCEL 239
Query: 240 MIGNKHERIKLLESQLVEG-EGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+GNK ER+K+L S +VEG G PG + ++ +AC+ G+VR++++QRAG + + +
Sbjct: 240 SVGNKTERLKILRSAMVEGASGAPGTIVSLDQGPVVACADGSVRLVQVQRAGKKPMTAEE 299
Query: 297 FLLGCPVIIGCIVG 310
FL G + G ++G
Sbjct: 300 FLRGVQLQTGSVLG 313
>gi|323974760|gb|EGB69873.1| methionyl-tRNA formyltransferase [Escherichia coli TW10509]
Length = 315
Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 178/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E +++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEACIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|327191109|gb|EGE58157.1| methionyl-tRNA formyltransferase protein [Rhizobium etli CNPAF512]
Length = 304
Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 170/303 (56%), Positives = 214/303 (70%), Gaps = 1/303 (0%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT EF+V TL+ LV + H IV+VYTQPPRP GRRGL S VH+ A+ LP P
Sbjct: 1 MGTPEFSVPTLRLLVDAGHRIVAVYTQPPRPGGRRGLDLQKSPVHQAAELLGLPVFTPIN 60
Query: 68 LGQ-EEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
EE E+F +F ADVAVVVAYGL++P+ +LN T+ G YNGHASLLPRWRGAAPIQRAI
Sbjct: 61 FRDAEERERFAAFKADVAVVVAYGLLLPEAVLNGTRDGCYNGHASLLPRWRGAAPIQRAI 120
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
MAGD +TG+ +MKMDK LDTG VA R+V I N+ L L + A AM EAM KLE
Sbjct: 121 MAGDEKTGMMVMKMDKGLDTGAVALSREVEIGPNMTAGELHDRLMQVGAKAMAEAMVKLE 180
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
N+LPL+PQ ++G+ YA KI K ETR++F R A +VHNHIR L+PFPGAW E+ IG K E
Sbjct: 181 MNDLPLTPQRQDGVLYAAKIDKAETRIDFARPARDVHNHIRGLAPFPGAWFELEIGGKPE 240
Query: 247 RIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIG 306
R+K+L S+L G+G G+++ + +AC+ GAVR+ RLQ+AGG+ L DFL G P+ G
Sbjct: 241 RVKVLGSELAAGQGAAGQLLTDDLVVACASGAVRLTRLQKAGGKPLAASDFLRGTPLAAG 300
Query: 307 CIV 309
+
Sbjct: 301 ARL 303
>gi|219871971|ref|YP_002476346.1| methionyl-tRNA formyltransferase [Haemophilus parasuis SH0165]
gi|254789356|sp|B8F7U6|FMT_HAEPS RecName: Full=Methionyl-tRNA formyltransferase
gi|219692175|gb|ACL33398.1| methionyl-tRNA formyltransferase [Haemophilus parasuis SH0165]
Length = 316
Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats.
Identities = 122/315 (38%), Positives = 184/315 (58%), Gaps = 8/315 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL++S H++++VYTQP +PAG RG K S V + A+ +P
Sbjct: 3 KLNIIFAGTPDFAATHLQALLNSEHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEVHHIP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E + + NADV VVVAYGL++P+ +L A K G N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKEEAQAELQALNADVMVVVAYGLILPEAVLKAPKYGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + PI + +A L +L+ L A++E
Sbjct: 122 PIQRSIWAGDTETGVTIMQMDIGLDTGDMLHKVTTPILATETSASLYAKLAELAPPALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L Q + YAEK++K E ++++ +A + +IRA +P P A+L +M
Sbjct: 182 VLNGLTSGQFKPEKQQDEQANYAEKLTKEEAKLDWNMTACQLERNIRAFNPAPMAYLTLM 241
Query: 241 IGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ERIK+ +++++ + K G V+ IA QG + I +LQ AG + + + D
Sbjct: 242 VNEVEERIKVYQAEVLPHQEKTVGTVLAVDKNGIQIATQQGVLNITQLQPAGKKPMSVQD 301
Query: 297 FLLGCP--VIIGCIV 309
FL G +G ++
Sbjct: 302 FLNGRGDWFKVGSVL 316
>gi|153855355|ref|ZP_01996504.1| hypothetical protein DORLON_02518 [Dorea longicatena DSM 13814]
gi|149752175|gb|EDM62106.1| hypothetical protein DORLON_02518 [Dorea longicatena DSM 13814]
Length = 322
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 98/314 (31%), Positives = 172/314 (54%), Gaps = 11/314 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++V+FMGT +F+V TL+AL+ + H +V TQP +P G RG K + V + A +P
Sbjct: 6 SMKVIFMGTPDFSVGTLEALIEAGHEVVLAVTQPDKPKG-RGGKMQYTPVKEAALAHGIP 64
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ + + + +NAD+ VV+A+G ++P+ IL T G N HASLLP +RGAA
Sbjct: 65 VFQPVKIREAQAVEELRKYNADIMVVIAFGQILPKEILEMTPYGCINVHASLLPSYRGAA 124
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ GD +G+ M+M++ LDTG + +VP++ + L +L+ A VE
Sbjct: 125 PIQWAVINGDKVSGVTTMQMNEGLDTGDMIMKTEVPLAEDETGGSLHDKLAKAGAKLCVE 184
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ LE Q E+ YA+ + K +++ +SA+ + IR L+P+P A+
Sbjct: 185 TLKALEDKTATWETQGESPTAYAKMLDKKLGDIDWSKSAKAIECLIRGLNPWPSAYT--- 241
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ E+++++ PG ++ F++ G ++++ LQ G + ++
Sbjct: 242 -DWNGKVMKIWEAKVLDENTDATPGTIVKVEKDGFSVQTGDGLLKVLVLQIPGKKRMEAD 300
Query: 296 DFLLGCPVIIGCIV 309
FL G + GC +
Sbjct: 301 AFLRGYQIETGCEL 314
>gi|283788077|ref|YP_003367942.1| methionyl-tRNA formyltransferase [Citrobacter rodentium ICC168]
gi|282951531|emb|CBG91230.1| methionyl-tRNA formyltransferase [Citrobacter rodentium ICC168]
Length = 315
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 113/316 (35%), Positives = 182/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL++S H++V V+TQP RPAG RG K + S V A+E +P
Sbjct: 4 SLRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E + ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQHLVADLHADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L +++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGTLYDKLAELGPQGLID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + Q E +T+AEK+SK E R+++ SA + +RA +P+P +WLE+
Sbjct: 183 TLKQLAEGRATPEKQDEALVTHAEKLSKEEARIDWSLSAAQLERCVRAFNPWPMSWLEI- 241
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ + PG ++ +A G + ++ LQ AG + +
Sbjct: 242 ---DGQPVKVWQATVIDAPTQAAPGTILEASKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 299 DLLNSRREWFIPGNRL 314
>gi|83951628|ref|ZP_00960360.1| methionyl-tRNA formyltransferase [Roseovarius nubinhibens ISM]
gi|83836634|gb|EAP75931.1| methionyl-tRNA formyltransferase [Roseovarius nubinhibens ISM]
Length = 302
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 155/309 (50%), Positives = 194/309 (62%), Gaps = 8/309 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT +F+V LQAL + H I +VY QPPRPAG RG K S V +A+E L
Sbjct: 1 MRVVFMGTPDFSVPVLQALQDAGHEIAAVYCQPPRPAG-RGKKLRPSPVQARAEELGLLV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E ++F + ADVAVVVAYGL++P+ IL+A G N HASLLPRWRGAAP
Sbjct: 60 RHPESLKTPEAQDEFAALGADVAVVVAYGLLLPRAILDAPAKGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD ETGI IM+M++ LDTGPV R PI T L LSV+ A +++A
Sbjct: 120 IHRAIMAGDAETGICIMQMEEGLDTGPVLLRRATPIGPRETTGQLHDRLSVMGAELIIDA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + L PQ E G+TYA KI K E R+++ A V IR LSPFPGAW+E+
Sbjct: 180 L--GQLDELTPEPQPEAGVTYAAKIDKAEARIDWGWRAAEVDRTIRGLSPFPGAWVEVAG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ERIKLL S+ EG G PGEV++ +AC QGAVR++RLQRAG D +FL G
Sbjct: 238 ----ERIKLLASEQAEGCGAPGEVLDDGLRVACGQGAVRLLRLQRAGRGAQDAPEFLRGL 293
Query: 302 PVIIGCIVG 310
+ G +G
Sbjct: 294 TLPRGSRLG 302
>gi|317056477|ref|YP_004104944.1| methionyl-tRNA formyltransferase [Ruminococcus albus 7]
gi|315448746|gb|ADU22310.1| methionyl-tRNA formyltransferase [Ruminococcus albus 7]
Length = 310
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 113/314 (35%), Positives = 172/314 (54%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV +L+AL+ + H I +V+ QP +P G RG+K V V A E ++P
Sbjct: 1 MKIVFMGTPDFAVPSLKALLEAGHKIQAVFCQPDKPKG-RGMKLVAPPVKNVASENNIPV 59
Query: 63 LVP---TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P G E + D VV AYG ++P+ +L+ K G N H SLLP++RGA
Sbjct: 60 YQPVSLKNSGDEYIKILEELAPDCIVVAAYGKILPKSVLDIPKYGCVNVHGSLLPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
PIQ A++ + TGI M M + LDTG + + I N A L L+V+ A +V
Sbjct: 120 GPIQWAVLNDEKTTGITTMLMGEGLDTGDMLLKCETEIGENETAAELFDRLAVMGADLIV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E +DKLE+ + PQ E TYA ++K + ++F +SA VH I LS +P A +
Sbjct: 180 ETLDKLEKGEVIPEPQNEEEATYAPMLTKELSSIDFSKSAREVHKQICGLSDWPCASTLI 239
Query: 240 MIGNKHERIKLLESQLVEGEG--KPGEVINP-NFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R+K+ S++V+G G V+N + T+AC +G VR +Q G + + D
Sbjct: 240 GG----KRLKIYHSEIVDGNSDKPAGTVVNNKDLTVACGEGLVRFTEIQAEGSKRMPTAD 295
Query: 297 FLLGCPVIIGCIVG 310
+L G P+ G ++G
Sbjct: 296 YLRGKPIAEGTVLG 309
>gi|33152993|ref|NP_874346.1| methionyl-tRNA formyltransferase [Haemophilus ducreyi 35000HP]
gi|39931234|sp|Q7VK98|FMT_HAEDU RecName: Full=Methionyl-tRNA formyltransferase
gi|33149218|gb|AAP96735.1| methionyl-tRNA formyltransferase [Haemophilus ducreyi 35000HP]
Length = 316
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 174/305 (57%), Gaps = 6/305 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT EFA LQAL++S H+IV+VYTQP +PAG RG K S V + A + ++P
Sbjct: 3 KLNIIFAGTPEFAAQHLQALLASQHNIVAVYTQPDKPAG-RGKKLQASPVKQLALQHNIP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + + N DV VVVAYGL++P+ +L+ + G N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRNPQAQAELNALNGDVMVVVAYGLILPEAVLHIPRYGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG + I ++ +A L +L+ L A++
Sbjct: 122 PIQRAIWAGDQETGVTIMQMDAGLDTGDMLHKVSTKIEADETSASLYMKLAKLAPPALLA 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D L + Q YAEK+SK E ++++ A + +IRA +P+P ++L +
Sbjct: 182 VLDGLTEQQFKPEKQDNQLANYAEKLSKQEAKLDWNLPAYQLAQNIRAFNPWPMSFLTVE 241
Query: 241 IGNKHERIKLLESQLVEGE-GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + +K+ ++ ++ + G V+ IA S+G + I +LQ G + + + D
Sbjct: 242 VEGVEQHVKVYQATVLAHQYHAVGTVLQVDKNGIQIATSEGVLNITQLQPQGKKPMSVQD 301
Query: 297 FLLGC 301
FL G
Sbjct: 302 FLNGR 306
>gi|320655926|gb|EFX23846.1| methionyl-tRNA formyltransferase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
Length = 315
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 178/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLP WRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPHWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +W+E+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWVEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|154250718|ref|YP_001411542.1| methionyl-tRNA formyltransferase [Parvibaculum lavamentivorans
DS-1]
gi|171769554|sp|A7HPQ2|FMT_PARL1 RecName: Full=Methionyl-tRNA formyltransferase
gi|154154668|gb|ABS61885.1| methionyl-tRNA formyltransferase [Parvibaculum lavamentivorans
DS-1]
Length = 310
Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats.
Identities = 140/308 (45%), Positives = 197/308 (63%), Gaps = 4/308 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ FMGT +F+V L ++++ H +V+VY+QPPR AG RG+ S VH+ A+E +P
Sbjct: 1 MKLAFMGTPDFSVPVLAEILAAGHEVVAVYSQPPRKAG-RGMAEQPSPVHRFAEEHGIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G+ E + F S + DVAVVVAYGL++P+ +L A +LG N HASLLPRWRGAAP
Sbjct: 60 FTPVSLKGEAEQQAFASLDLDVAVVVAYGLILPKPVLEAPRLGCLNLHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETG+ +M+M++ LDTGPV +V I+ + GL LS + A MV A
Sbjct: 120 IQRAIMAGDAETGVMVMQMEEGLDTGPVLLAERVAIAPDETAGGLHDRLSHIGASLMVRA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L + L +PQ E G+TYA KI K E R+++ R A + HIR L+PFPGA+ E+
Sbjct: 180 LAALSRGGLAAAPQPEEGVTYARKIEKAEARIDWRRPANELDCHIRGLTPFPGAFFEIAR 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPN--FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
G + R+K+L ++ V G+PG+V++ IAC +GA+ I LQRAG + DFL
Sbjct: 240 GGETIRVKILRAKPVAKSGEPGKVLDAGESIIIACGEGALEISGLQRAGKAAVTARDFLR 299
Query: 300 GCPVIIGC 307
G + G
Sbjct: 300 GFALKPGE 307
>gi|237728622|ref|ZP_04559103.1| methionyl-tRNA formyltransferase [Citrobacter sp. 30_2]
gi|226909244|gb|EEH95162.1| methionyl-tRNA formyltransferase [Citrobacter sp. 30_2]
Length = 315
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 182/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E +P
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLHADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + PI++ + L +L+ L ++E
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLLKLSCPITAEDTSGSLYDKLADLGPQGLIE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + Q E+ +T+AEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLAAGTIKPVVQDESLVTHAEKLSKEEARIDWSLSAVQLERCIRAFNPWPMSWLEI- 241
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++ + +PG ++ +A G + ++ LQ AG + +
Sbjct: 242 ---DGQPVKVWQASVIAVNTQAEPGTILEATKQGIQVATGDGILNLISLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|293412706|ref|ZP_06655374.1| methionyl-tRNA formyltransferase [Escherichia coli B354]
gi|291468353|gb|EFF10846.1| methionyl-tRNA formyltransferase [Escherichia coli B354]
Length = 315
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAQLGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|117923459|ref|YP_864076.1| methionyl-tRNA formyltransferase [Magnetococcus sp. MC-1]
gi|229487499|sp|A0L3X7|FMT_MAGSM RecName: Full=Methionyl-tRNA formyltransferase
gi|117607215|gb|ABK42670.1| methionyl-tRNA formyltransferase [Magnetococcus sp. MC-1]
Length = 312
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 116/311 (37%), Positives = 175/311 (56%), Gaps = 9/311 (2%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
RVVFMGT +FA TLQAL+ ++V+V+TQP +P G RG+K + V + A++ +P
Sbjct: 5 RVVFMGTPDFATGTLQALLDGPDTVVAVFTQPDKPVG-RGMKMQKTPVKQLAEQHGIPVY 63
Query: 64 VPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P + E + DV VVVAYG ++ + +L G N HASLLPRWRGAAPI
Sbjct: 64 QPNRLREAEAVTALRALRPDVVVVVAYGQILSREVLEIPTHGCINVHASLLPRWRGAAPI 123
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI+AGD ++G+ IM M++ LDTGP+ I ++ L +L +VE +
Sbjct: 124 QRAILAGDAQSGVTIMAMEEGLDTGPMYSTVVQSIDNHTTGGQLHDQLMAAGGGLLVETL 183
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+++ L Q E G+TYA K+ K E V++ + A + ++A P+P A+
Sbjct: 184 ARIKHEGLTPQIQPEQGVTYAAKLKKEEGLVDWSQPAIQIQRAVQAFDPWPCAFT----L 239
Query: 243 NKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ + +KL + +V G G PGEVI F +AC GA+R+ ++Q AG + + G++L
Sbjct: 240 WQGKPLKLFAASVVVGHGTPGEVIEVEKDGFVVACGDGALRVAQVQAAGKKRMSSGEWLR 299
Query: 300 GCPVIIGCIVG 310
G V G +G
Sbjct: 300 GHGVKQGERLG 310
>gi|239826565|ref|YP_002949189.1| methionyl-tRNA formyltransferase [Geobacillus sp. WCH70]
gi|259646036|sp|C5D8R6|FMT_GEOSW RecName: Full=Methionyl-tRNA formyltransferase
gi|239806858|gb|ACS23923.1| methionyl-tRNA formyltransferase [Geobacillus sp. WCH70]
Length = 318
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 100/315 (31%), Positives = 168/315 (53%), Gaps = 10/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ ++I +V TQP +P G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPILKQLIEDGYNIAAVVTQPDKPKG-RKRELTPPPVKVEAEKHGIPV 60
Query: 63 LVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L PTK+ ++E + + +F D+ V A+G ++P+ +L+A K G N HASLLP RG AP
Sbjct: 61 LQPTKIREKEQYEQVLAFKPDLIVTAAFGQILPKALLDAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G +TG+ IM M + LD G + +VPI+ L +LS+ A + E
Sbjct: 121 IHYAILQGKTKTGVTIMYMVEKLDAGDILTQVEVPITETDTVGTLHDKLSIAGAKLLSET 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L L Q + TYA I + + ++++ + E+++NHIR L P+P A+
Sbjct: 181 IPQLVAGKLTPIKQDDEKATYAYNIKREQEKIDWTKPGEDIYNHIRGLHPWPVAYTTFA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACS-QGAVRIMRLQRAGGRVLDIGDF 297
++ E + +PG +I+ +A + A++I LQ AG + ++ F
Sbjct: 240 -GNVWKVWWGEKVPAPKKAEPGTIIDIVQDGIVVATGNETAIKITELQPAGKKRMNAAQF 298
Query: 298 LL--GCPVIIGCIVG 310
L G + IG +G
Sbjct: 299 LRGAGAHLTIGMKLG 313
>gi|320173932|gb|EFW49108.1| Methionyl-tRNA formyltransferase [Shigella dysenteriae CDC 74-1112]
Length = 315
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 ----RQPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|218702050|ref|YP_002409679.1| methionyl-tRNA formyltransferase [Escherichia coli IAI39]
gi|226704296|sp|B7NLK7|FMT_ECO7I RecName: Full=Methionyl-tRNA formyltransferase
gi|218372036|emb|CAR19896.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli IAI39]
Length = 315
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 178/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ GD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWTGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|13474064|ref|NP_105632.1| methionyl-tRNA formyltransferase [Mesorhizobium loti MAFF303099]
gi|21542052|sp|Q98D53|FMT_RHILO RecName: Full=Methionyl-tRNA formyltransferase
gi|14024816|dbj|BAB51418.1| methionyl-tRNA formyltransferase [Mesorhizobium loti MAFF303099]
Length = 317
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 154/316 (48%), Positives = 208/316 (65%), Gaps = 7/316 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LRV+FMGT EF+V TL+A+ + H I +VYTQPPR AGRRGL+ S V ++A+ +
Sbjct: 1 MPLRVIFMGTPEFSVPTLRAIAKAGHEISAVYTQPPRAAGRRGLELTPSPVQREAERLGI 60
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
PT G+ E F + AD+AVVVAYGL++P+ IL+A +LG NGHASLLPRWRGA
Sbjct: 61 EVRTPTSLKGEAEQAAFNALRADIAVVVAYGLLLPKVILDAPRLGCINGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD E+G+ +M+M++ LDTGPV + K I ++ L L + A MV
Sbjct: 121 APIQRAIMAGDLESGMMVMRMEEGLDTGPVGLLEKCAIDPDMTAGDLHDRLMRVGAALMV 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EA+ +L +N L + Q G+TYA KI K ETRV++ R A VHNH+R LSPFPGAW E+
Sbjct: 181 EALARLAKNTLTFTAQAAEGVTYARKIDKSETRVDWTRPAAEVHNHLRGLSPFPGAWSEI 240
Query: 240 MIGNKHERIKLLESQLVEG------EGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLD 293
IG + ER+KLL S L +G G+ G +++ T+AC GA+R++ +QRAGG+
Sbjct: 241 DIGGRMERLKLLRSTLSDGLSPSEDLGESGGILDDRLTVACGAGAIRLVEVQRAGGKPAA 300
Query: 294 IGDFLLGCPVIIGCIV 309
+FL G ++ G
Sbjct: 301 ASEFLRGAKIVKGMKF 316
>gi|187730742|ref|YP_001881971.1| methionyl-tRNA formyltransferase [Shigella boydii CDC 3083-94]
gi|238689491|sp|B2U2Q5|FMT_SHIB3 RecName: Full=Methionyl-tRNA formyltransferase
gi|187427734|gb|ACD07008.1| methionyl-tRNA formyltransferase [Shigella boydii CDC 3083-94]
Length = 315
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q + +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDKTLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 ----RQPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|260588061|ref|ZP_05853974.1| methionyl-tRNA formyltransferase [Blautia hansenii DSM 20583]
gi|331082370|ref|ZP_08331496.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541588|gb|EEX22157.1| methionyl-tRNA formyltransferase [Blautia hansenii DSM 20583]
gi|330400856|gb|EGG80457.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
6_1_63FAA]
Length = 310
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 102/315 (32%), Positives = 164/315 (52%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT +FA TL+ +V S + IV V TQP +P G RG + + V + A ++ LP
Sbjct: 1 MRVVFMGTPDFATGTLEEIVRSGYEIVGVVTQPDKPKG-RGKNLMPTPVKEVALKYDLPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + E+ + L DV VV A+G +I + IL + G N HASLLP +RGAAP
Sbjct: 60 YQPKRAKEPEFIETLRGLKPDVIVVAAFGQIITKEILEMPRFGCVNVHASLLPAYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ GD E+G+ IM+MD+ +DTG + VPI+ + L +LS A V+
Sbjct: 120 IQWAVINGDKESGVTIMQMDEGIDTGDMMDKVVVPIAEDETGGSLFDKLSEAGAKLCVKV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGET-RVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ LE+ Q + T + + + A+ + IR L+P+P A+ ++
Sbjct: 180 LKDLEEGKAVRVKQPKESTTAYASMISKGMGEIKWDCKAKEIEQLIRGLNPWPSAYTKV- 238
Query: 241 IGNKHERIKLLESQLVEGE-----GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +KL +++++E G+ ++ + +G ++I LQ G + +D
Sbjct: 239 ---HGKMLKLWKAEVLEDTAHRQTGEIVKIEKDGICVQTGEGLLKIRELQLEGKKRMDAA 295
Query: 296 DFLLGCPVIIGCIVG 310
FL G V G I+G
Sbjct: 296 AFLRGYSVSEGEILG 310
>gi|330957386|gb|EGH57646.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 314
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 122/315 (38%), Positives = 180/315 (57%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S H IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSPHQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHDIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VMQPPTLRDPAAQAELAALEPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PI++ L L+ L A+++
Sbjct: 123 PIQRAVQAGDAESGVTVMRMEAGLDTGPMLLKAVTPITAQDTGGTLHDRLAELGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L +L Q ++ YA K++K E R+++ R A+ + +RA +P+P +
Sbjct: 183 AIAGLADGSLVGEVQDDSLANYAHKLNKDEARIDWSRPADELGRLVRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PG ++ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 242 ---NDETLKVLAADLAEGQGTPGTILSASKDGLIVACGQNALRLTRLQLPGGKPLNFSDL 298
Query: 298 LLGCP--VIIGCIVG 310
IG ++G
Sbjct: 299 FNSRREKFAIGTVLG 313
>gi|254360895|ref|ZP_04977041.1| methionyl-tRNA formyltransferase [Mannheimia haemolytica PHL213]
gi|153092374|gb|EDN73437.1| methionyl-tRNA formyltransferase [Mannheimia haemolytica PHL213]
Length = 317
Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 123/305 (40%), Positives = 178/305 (58%), Gaps = 6/305 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL+ S H++++VYTQP +PAG RG K S V + A+ ++P
Sbjct: 3 KLNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEAHNIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +EE + L DV VVVAYGL++P+ +LNA K G N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKEEAQAELKALNADVMVVVAYGLILPEAVLNAPKYGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM MD LDTG + PI N +A L +L+ L A++E
Sbjct: 122 PIQRSIWAGDTETGVTIMLMDVGLDTGDMLHKVTTPIEPNETSASLYAKLAELAPLALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L + Q E YAEK+SK E ++++ A + +IRA +P+P ++L +
Sbjct: 182 VLNGLANHTFKAEKQDEALSNYAEKLSKEEAKLDWQLPAVQLERNIRAFNPWPFSFLTLT 241
Query: 241 IGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + IK+ ++ ++ + K G VI IA QG + I +LQ AG + + + D
Sbjct: 242 VDGVEQSIKIHQATVLPHQEKAAGTVINVDKTGIQIATQQGVLNITQLQPAGKKPMSVQD 301
Query: 297 FLLGC 301
FL G
Sbjct: 302 FLNGR 306
>gi|331674795|ref|ZP_08375552.1| methionyl-tRNA formyltransferase [Escherichia coli TA280]
gi|331067704|gb|EGI39102.1| methionyl-tRNA formyltransferase [Escherichia coli TA280]
Length = 315
Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKILAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|82778585|ref|YP_404934.1| methionyl-tRNA formyltransferase [Shigella dysenteriae Sd197]
gi|309785610|ref|ZP_07680241.1| methionyl-tRNA formyltransferase [Shigella dysenteriae 1617]
gi|123742077|sp|Q32B62|FMT_SHIDS RecName: Full=Methionyl-tRNA formyltransferase
gi|81242733|gb|ABB63443.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Shigella dysenteriae Sd197]
gi|308926730|gb|EFP72206.1| methionyl-tRNA formyltransferase [Shigella dysenteriae 1617]
Length = 315
Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|193066482|ref|ZP_03047526.1| methionyl-tRNA formyltransferase [Escherichia coli E22]
gi|194430290|ref|ZP_03062785.1| methionyl-tRNA formyltransferase [Escherichia coli B171]
gi|215488587|ref|YP_002331018.1| methionyl-tRNA formyltransferase [Escherichia coli O127:H6 str.
E2348/69]
gi|218696980|ref|YP_002404647.1| methionyl-tRNA formyltransferase [Escherichia coli 55989]
gi|256020646|ref|ZP_05434511.1| methionyl-tRNA formyltransferase [Shigella sp. D9]
gi|260846085|ref|YP_003223863.1| 10-formyltetrahydrofolate:
L-methionyl-tRNA(fMet)N-formyltransferase [Escherichia
coli O103:H2 str. 12009]
gi|300935285|ref|ZP_07150296.1| methionyl-tRNA formyltransferase [Escherichia coli MS 21-1]
gi|312968387|ref|ZP_07782597.1| methionyl-tRNA formyltransferase [Escherichia coli 2362-75]
gi|331670117|ref|ZP_08370956.1| methionyl-tRNA formyltransferase [Escherichia coli TA271]
gi|331679356|ref|ZP_08380026.1| methionyl-tRNA formyltransferase [Escherichia coli H591]
gi|332281842|ref|ZP_08394255.1| methionyl-tRNA formyltransferase [Shigella sp. D9]
gi|254789352|sp|B7UK11|FMT_ECO27 RecName: Full=Methionyl-tRNA formyltransferase
gi|254789353|sp|B7LHY8|FMT_ECO55 RecName: Full=Methionyl-tRNA formyltransferase
gi|192925863|gb|EDV80513.1| methionyl-tRNA formyltransferase [Escherichia coli E22]
gi|194411679|gb|EDX28006.1| methionyl-tRNA formyltransferase [Escherichia coli B171]
gi|215266659|emb|CAS11098.1| 10-formyltetrahydrofolate: L-methionyl-tRNA (fMet)
N-formyltransferase [Escherichia coli O127:H6 str.
E2348/69]
gi|218353712|emb|CAU99983.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli 55989]
gi|257761232|dbj|BAI32729.1| 10-formyltetrahydrofolate:
L-methionyl-tRNA(fMet)N-formyltransferase [Escherichia
coli O103:H2 str. 12009]
gi|284923294|emb|CBG36388.1| methionyl-tRNA formyltransferase [Escherichia coli 042]
gi|300459488|gb|EFK22981.1| methionyl-tRNA formyltransferase [Escherichia coli MS 21-1]
gi|312287212|gb|EFR15122.1| methionyl-tRNA formyltransferase [Escherichia coli 2362-75]
gi|323162966|gb|EFZ48801.1| methionyl-tRNA formyltransferase [Escherichia coli E128010]
gi|323173924|gb|EFZ59552.1| methionyl-tRNA formyltransferase [Escherichia coli LT-68]
gi|323189107|gb|EFZ74391.1| methionyl-tRNA formyltransferase [Escherichia coli RN587/1]
gi|331062179|gb|EGI34099.1| methionyl-tRNA formyltransferase [Escherichia coli TA271]
gi|331072528|gb|EGI43853.1| methionyl-tRNA formyltransferase [Escherichia coli H591]
gi|332104194|gb|EGJ07540.1| methionyl-tRNA formyltransferase [Shigella sp. D9]
Length = 315
Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|293416706|ref|ZP_06659343.1| methionyl-tRNA formyltransferase [Escherichia coli B185]
gi|291431282|gb|EFF04267.1| methionyl-tRNA formyltransferase [Escherichia coli B185]
Length = 315
Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +W+E+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWVEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|91774542|ref|YP_544298.1| methionyl-tRNA formyltransferase [Methylobacillus flagellatus KT]
gi|122985660|sp|Q1H4Y0|FMT_METFK RecName: Full=Methionyl-tRNA formyltransferase
gi|91708529|gb|ABE48457.1| methionyl-tRNA formyltransferase [Methylobacillus flagellatus KT]
Length = 308
Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 123/312 (39%), Positives = 180/312 (57%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++++ GT +FAV L+AL+ SSH + V TQP RPAG RGLK S V A E +P
Sbjct: 1 MKIIYAGTPDFAVPALRALIQSSHEVSLVLTQPDRPAG-RGLKLKPSPVKSLALEHGIPL 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P L E + ++ D VV AYGL+IP +L+ + G YN HASLLPRWRGAAP
Sbjct: 60 LQPETLKDEAVQARIAAEHADALVVAAYGLIIPATVLSMPRYGCYNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA++AGD ETG+ IM++ LD G + +PI+ + L L+ + A M++A
Sbjct: 120 IQRALLAGDKETGVTIMEVVPALDAGAMILRGTLPITEHDTAQTLHDGLAEIGAELMLQA 179
Query: 182 MDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MDKLE+ PQ E+ +TYA+K+ K E +++ ++A+ + +RA +PFP A +
Sbjct: 180 MDKLEREGRLEAEPQDESLVTYAQKLQKAEAVIDWRKNADELSRQVRAFNPFPVAHSTLK 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
E ++ +Q V G +PG + ++ + C +G +RI LQ GG+ L DFL
Sbjct: 240 G----ETCRIWMAQAVSGTAEPGMIASVDNGILVGCGRGLLRIDELQLPGGKRLQAKDFL 295
Query: 299 LGCPVIIGCIVG 310
G P+ G G
Sbjct: 296 AGNPLCPGDRFG 307
>gi|15803815|ref|NP_289849.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 EDL933]
gi|15833407|ref|NP_312180.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
Sakai]
gi|168758515|ref|ZP_02783522.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4401]
gi|168764970|ref|ZP_02789977.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4501]
gi|168769149|ref|ZP_02794156.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4486]
gi|168777855|ref|ZP_02802862.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4196]
gi|168783854|ref|ZP_02808861.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4076]
gi|168786177|ref|ZP_02811184.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC869]
gi|168802717|ref|ZP_02827724.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC508]
gi|195939835|ref|ZP_03085217.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4024]
gi|208807557|ref|ZP_03249894.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4206]
gi|208812388|ref|ZP_03253717.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4045]
gi|208818701|ref|ZP_03259021.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4042]
gi|209397164|ref|YP_002272744.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4115]
gi|217324530|ref|ZP_03440614.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|254795224|ref|YP_003080061.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
TW14359]
gi|261224592|ref|ZP_05938873.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli O157:H7 str.
FRIK2000]
gi|261254514|ref|ZP_05947047.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli O157:H7 str.
FRIK966]
gi|291284646|ref|YP_003501464.1| Methionyl-tRNA formyltransferase [Escherichia coli O55:H7 str.
CB9615]
gi|331654880|ref|ZP_08355879.1| methionyl-tRNA formyltransferase [Escherichia coli M718]
gi|21542040|sp|Q8X8F1|FMT_ECO57 RecName: Full=Methionyl-tRNA formyltransferase
gi|238065950|sp|B5YT07|FMT_ECO5E RecName: Full=Methionyl-tRNA formyltransferase
gi|12517917|gb|AAG58409.1|AE005556_2 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli O157:H7 str.
EDL933]
gi|13363626|dbj|BAB37576.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli O157:H7 str.
Sakai]
gi|187767010|gb|EDU30854.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4196]
gi|188998872|gb|EDU67858.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4076]
gi|189354684|gb|EDU73103.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4401]
gi|189361852|gb|EDU80271.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4486]
gi|189365130|gb|EDU83546.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4501]
gi|189374012|gb|EDU92428.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC869]
gi|189375352|gb|EDU93768.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC508]
gi|208727358|gb|EDZ76959.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4206]
gi|208733665|gb|EDZ82352.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4045]
gi|208738824|gb|EDZ86506.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4042]
gi|209158564|gb|ACI35997.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4115]
gi|209757348|gb|ACI76986.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli]
gi|209757350|gb|ACI76987.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli]
gi|209757352|gb|ACI76988.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli]
gi|209757354|gb|ACI76989.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli]
gi|209757356|gb|ACI76990.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli]
gi|217320751|gb|EEC29175.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|254594624|gb|ACT73985.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli O157:H7 str.
TW14359]
gi|290764519|gb|ADD58480.1| Methionyl-tRNA formyltransferase [Escherichia coli O55:H7 str.
CB9615]
gi|320191678|gb|EFW66328.1| Methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC1212]
gi|320639592|gb|EFX09186.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
G5101]
gi|320645090|gb|EFX14106.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H- str.
493-89]
gi|320650401|gb|EFX18867.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H- str. H
2687]
gi|320661378|gb|EFX28793.1| methionyl-tRNA formyltransferase [Escherichia coli O55:H7 str. USDA
5905]
gi|320666400|gb|EFX33383.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
LSU-61]
gi|326342536|gb|EGD66310.1| Methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
1044]
gi|326344523|gb|EGD68272.1| Methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
1125]
gi|331046895|gb|EGI18973.1| methionyl-tRNA formyltransferase [Escherichia coli M718]
Length = 315
Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +W+E+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWVEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|323934514|gb|EGB30922.1| methionyl-tRNA formyltransferase [Escherichia coli E1520]
Length = 315
Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKKEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|82545650|ref|YP_409597.1| methionyl-tRNA formyltransferase [Shigella boydii Sb227]
gi|123769392|sp|Q31VY9|FMT_SHIBS RecName: Full=Methionyl-tRNA formyltransferase
gi|81247061|gb|ABB67769.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Shigella boydii Sb227]
gi|320187009|gb|EFW61721.1| Methionyl-tRNA formyltransferase [Shigella flexneri CDC 796-83]
gi|332090489|gb|EGI95587.1| methionyl-tRNA formyltransferase [Shigella boydii 3594-74]
Length = 315
Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 180/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + +IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERYIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 ----RQPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|2914332|pdb|1FMT|A Chain A, Methionyl-Trnafmet Formyltransferase From Escherichia Coli
gi|2914333|pdb|1FMT|B Chain B, Methionyl-Trnafmet Formyltransferase From Escherichia Coli
gi|5822477|pdb|2FMT|A Chain A, Methionyl-Trnafmet Formyltransferase Complexed With
Formyl- Methionyl-Trnafmet
gi|5822478|pdb|2FMT|B Chain B, Methionyl-Trnafmet Formyltransferase Complexed With
Formyl- Methionyl-Trnafmet
Length = 314
Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 3 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 62 VFQPVSLRPQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 122 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 182 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 241
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 242 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 297
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 298 DLLNSRREWFVPGNRL 313
>gi|16131167|ref|NP_417746.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli str. K-12 substr.
MG1655]
gi|89110723|ref|AP_004503.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli str. K-12 substr.
W3110]
gi|157162761|ref|YP_001460079.1| methionyl-tRNA formyltransferase [Escherichia coli HS]
gi|170018477|ref|YP_001723431.1| methionyl-tRNA formyltransferase [Escherichia coli ATCC 8739]
gi|170082808|ref|YP_001732128.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli str. K-12 substr.
DH10B]
gi|194439996|ref|ZP_03072054.1| methionyl-tRNA formyltransferase [Escherichia coli 101-1]
gi|238902378|ref|YP_002928174.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli BW2952]
gi|253771889|ref|YP_003034720.1| methionyl-tRNA formyltransferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254038448|ref|ZP_04872504.1| methionyl-tRNA formyltransferase [Escherichia sp. 1_1_43]
gi|254163215|ref|YP_003046323.1| methionyl-tRNA formyltransferase [Escherichia coli B str. REL606]
gi|256025985|ref|ZP_05439850.1| methionyl-tRNA formyltransferase [Escherichia sp. 4_1_40B]
gi|297517905|ref|ZP_06936291.1| methionyl-tRNA formyltransferase [Escherichia coli OP50]
gi|307139970|ref|ZP_07499326.1| methionyl-tRNA formyltransferase [Escherichia coli H736]
gi|312972451|ref|ZP_07786625.1| methionyl-tRNA formyltransferase [Escherichia coli 1827-70]
gi|331643983|ref|ZP_08345112.1| methionyl-tRNA formyltransferase [Escherichia coli H736]
gi|120451|sp|P23882|FMT_ECOLI RecName: Full=Methionyl-tRNA formyltransferase
gi|166988365|sp|A8A592|FMT_ECOHS RecName: Full=Methionyl-tRNA formyltransferase
gi|189044510|sp|B1IQ12|FMT_ECOLC RecName: Full=Methionyl-tRNA formyltransferase
gi|229487523|sp|B1X6E0|FMT_ECODH RecName: Full=Methionyl-tRNA formyltransferase
gi|259646029|sp|C4ZUE2|FMT_ECOBW RecName: Full=Methionyl-tRNA formyltransferase
gi|581088|emb|CAA45207.1| methionyl-tRNA formyltransferase [Escherichia coli K-12]
gi|581089|emb|CAA54368.1| methionyl-tRNA formyltransferase [Escherichia coli K-12]
gi|1789683|gb|AAC76313.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli str. K-12 substr.
MG1655]
gi|85676754|dbj|BAE78004.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli str. K12 substr.
W3110]
gi|157068441|gb|ABV07696.1| methionyl-tRNA formyltransferase [Escherichia coli HS]
gi|169753405|gb|ACA76104.1| methionyl-tRNA formyltransferase [Escherichia coli ATCC 8739]
gi|169890643|gb|ACB04350.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli str. K-12 substr.
DH10B]
gi|194421048|gb|EDX37077.1| methionyl-tRNA formyltransferase [Escherichia coli 101-1]
gi|226838954|gb|EEH70977.1| methionyl-tRNA formyltransferase [Escherichia sp. 1_1_43]
gi|238859732|gb|ACR61730.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli BW2952]
gi|242378814|emb|CAQ33606.1| 10-formyltetrahydrofolate:L-methionyl-tRNA[fMet]
N-formyltransferase [Escherichia coli BL21(DE3)]
gi|253322933|gb|ACT27535.1| methionyl-tRNA formyltransferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975116|gb|ACT40787.1| methionyl-tRNA formyltransferase [Escherichia coli B str. REL606]
gi|253979272|gb|ACT44942.1| methionyl-tRNA formyltransferase [Escherichia coli BL21(DE3)]
gi|260447694|gb|ACX38116.1| methionyl-tRNA formyltransferase [Escherichia coli DH1]
gi|309703699|emb|CBJ03040.1| methionyl-tRNA formyltransferase [Escherichia coli ETEC H10407]
gi|310334828|gb|EFQ01033.1| methionyl-tRNA formyltransferase [Escherichia coli 1827-70]
gi|315137863|dbj|BAJ45022.1| methionyl-tRNA formyltransferase [Escherichia coli DH1]
gi|323939291|gb|EGB35503.1| methionyl-tRNA formyltransferase [Escherichia coli E482]
gi|323959562|gb|EGB55215.1| methionyl-tRNA formyltransferase [Escherichia coli H489]
gi|323970091|gb|EGB65365.1| methionyl-tRNA formyltransferase [Escherichia coli TA007]
gi|331036277|gb|EGI08503.1| methionyl-tRNA formyltransferase [Escherichia coli H736]
gi|332345235|gb|AEE58569.1| methionyl-tRNA formyltransferase [Escherichia coli UMNK88]
Length = 315
Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|146313353|ref|YP_001178427.1| methionyl-tRNA formyltransferase [Enterobacter sp. 638]
gi|166988366|sp|A4WF96|FMT_ENT38 RecName: Full=Methionyl-tRNA formyltransferase
gi|145320229|gb|ABP62376.1| methionyl-tRNA formyltransferase [Enterobacter sp. 638]
Length = 315
Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 118/316 (37%), Positives = 181/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K + V A++ +LP
Sbjct: 4 KLRIIFAGTPDFAARHLDALLSSGHQIVGVFTQPDRPAG-RGKKLMPGPVKVLAEKHNLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q +S DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVSDLNADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD+ETG+ IM+MD LDTG + + PI++ +A L +L+ L ++E
Sbjct: 123 PIQRSLWAGDSETGVTIMRMDVGLDTGDMLYKLACPITAEDTSATLYDKLADLGPQGLIE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E ++++ SA + IRA +P+P +W+ +
Sbjct: 183 TLQQLADGKAQPEVQDEAFVTYAEKLSKEEAQLDWSLSAAQLERCIRAFNPWPMSWMTI- 241
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++ E + +PG +I +A + G + + LQ AG + +
Sbjct: 242 ---DEQPVKIWKASVINREAKAEPGTIIEATREGIQVATADGILNLESLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 299 DLLNSRREWFTPGTRL 314
>gi|315617090|gb|EFU97700.1| methionyl-tRNA formyltransferase [Escherichia coli 3431]
Length = 315
Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 178/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDGTLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|166032718|ref|ZP_02235547.1| hypothetical protein DORFOR_02433 [Dorea formicigenerans ATCC
27755]
gi|166027075|gb|EDR45832.1| hypothetical protein DORFOR_02433 [Dorea formicigenerans ATCC
27755]
Length = 311
Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 103/313 (32%), Positives = 167/313 (53%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMGT +F+V TL+AL + H +V TQP +P G RG K + V + A +P
Sbjct: 1 MKVIFMGTPDFSVGTLEALAEAGHEVVLAVTQPDKPKG-RGGKMQYTPVKEAALARDIPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ + E + +NAD+ VV+A+G ++P+ IL T G N HASLLP++RGAAP
Sbjct: 60 YQPKKIREPECIEELKKYNADIMVVIAFGQILPKEILQMTPYGCINVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ +G+ M+M++ LDTG + ++P+ L +L+ A VE
Sbjct: 120 IQWAVIDGEKFSGVTTMQMNEGLDTGDMILKTEIPLDPKETGGSLHDKLAEAGAKLCVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE PQ E+ YA+ + K +N+ A + IR L+P+P A+
Sbjct: 180 LKCLEDKTATWEPQGESTTAYAKMLDKNLGNINWNDPAVQIERLIRGLNPWPSAYT---- 235
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ IKL ++ +VE + G ++ +F + +G ++I LQ G + +D G
Sbjct: 236 HWNDKVIKLWQADVVEDNTDQEAGTIVKVEKDSFYVQTGEGLLKIEELQLQGKKRMDAGA 295
Query: 297 FLLGCPVIIGCIV 309
FL G + G I+
Sbjct: 296 FLRGNHLEYGEIL 308
>gi|260857408|ref|YP_003231299.1| 10-formyltetrahydrofolate:
L-methionyl-tRNA(fMet)N-formyltransferase [Escherichia
coli O26:H11 str. 11368]
gi|260870030|ref|YP_003236432.1| 10-formyltetrahydrofolate:
L-methionyl-tRNA(fMet)N-formyltransferase [Escherichia
coli O111:H- str. 11128]
gi|257756057|dbj|BAI27559.1| 10-formyltetrahydrofolate:
L-methionyl-tRNA(fMet)N-formyltransferase [Escherichia
coli O26:H11 str. 11368]
gi|257766386|dbj|BAI37881.1| 10-formyltetrahydrofolate:
L-methionyl-tRNA(fMet)N-formyltransferase [Escherichia
coli O111:H- str. 11128]
gi|323154125|gb|EFZ40328.1| methionyl-tRNA formyltransferase [Escherichia coli EPECa14]
gi|323179176|gb|EFZ64750.1| methionyl-tRNA formyltransferase [Escherichia coli 1180]
Length = 315
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQESQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|74313806|ref|YP_312225.1| methionyl-tRNA formyltransferase [Shigella sonnei Ss046]
gi|123732291|sp|Q3YWX2|FMT_SHISS RecName: Full=Methionyl-tRNA formyltransferase
gi|73857283|gb|AAZ89990.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Shigella sonnei Ss046]
gi|323164852|gb|EFZ50643.1| methionyl-tRNA formyltransferase [Shigella sonnei 53G]
Length = 315
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQESQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|85705031|ref|ZP_01036131.1| methionyl-tRNA formyltransferase [Roseovarius sp. 217]
gi|85670353|gb|EAQ25214.1| methionyl-tRNA formyltransferase [Roseovarius sp. 217]
Length = 302
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 154/309 (49%), Positives = 193/309 (62%), Gaps = 8/309 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT +F+V L+ALV++ H + +VY QPPRPAG RG K S V +A+ LP
Sbjct: 1 MRVIFMGTPDFSVPVLEALVAAGHEVAAVYCQPPRPAG-RGKKDRPSPVQARAEALGLPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G E +F + ADVAVVVAYGL++PQ +L+A G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKGAEAQAEFAALKADVAVVVAYGLILPQAVLDAPARGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD ETGI IM+M+ LDTGPV + I T L LS L A ++EA
Sbjct: 120 IHRAIMAGDVETGICIMQMEAGLDTGPVLLRGAMTIGPQETTGELHDRLSGLGARLIIEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++L PQ E G+TYA KI K E RV + R A + IR LSPFPGAW E+
Sbjct: 180 L--GRLDDLRPVPQSEAGVTYAAKIDKSEARVEWTRPAAEIDRLIRGLSPFPGAWCEVGG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ERIKLL S + EG+G PG V++ T+AC GAVR++RLQRAG D +FL G
Sbjct: 238 ----ERIKLLCSTVAEGQGAPGVVLDDGLTVACGTGAVRLLRLQRAGRAAQDADEFLRGM 293
Query: 302 PVIIGCIVG 310
P+ G +G
Sbjct: 294 PLPCGTQLG 302
>gi|225181327|ref|ZP_03734771.1| methionyl-tRNA formyltransferase [Dethiobacter alkaliphilus AHT 1]
gi|225167908|gb|EEG76715.1| methionyl-tRNA formyltransferase [Dethiobacter alkaliphilus AHT 1]
Length = 311
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 119/316 (37%), Positives = 187/316 (59%), Gaps = 12/316 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M +++F+GT +FAVATL+ L + ++V+V TQP RP+G RG K + V + AQE
Sbjct: 1 MKNKKIIFLGTPDFAVATLRKLHDA-FTVVAVVTQPDRPSG-RGKKMMAPPVKQVAQELG 58
Query: 60 LPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP P K+ E++ Q+L D V AYG ++P +L K+ N HASLLPRWRG
Sbjct: 59 LPVEQPQKIKNEQFLQWLKSLEPDFLVTAAYGRILPGTVLAVPKIAALNVHASLLPRWRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPI RA++AGD ++GI IM MD+ +DTG + + VPIS+ + T L +L+ + +
Sbjct: 119 AAPIHRAVLAGDEKSGITIMHMDEGMDTGDMILQQAVPISNELTTGELHDQLAAVGGDLI 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
VEA++K+ Q + P Q ++ T A +++ E ++++CR + VHN +R ++P+PG +
Sbjct: 179 VEAIEKILQGDAPRVSQDQSKATAAPPLTREEEQIDWCRDTKEVHNRVRGMNPWPGTYTF 238
Query: 239 MMIGNKHERIKLLESQLVEGEGK-PGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +R+K+ + G+GK GEV+ +A GA I RLQ G + +
Sbjct: 239 I----DGQRLKIWSGKPAGGKGKRCGEVLRADGEGILVATKDGAYLITRLQPPGKKPMTA 294
Query: 295 GDFLLGCPVIIGCIVG 310
GDFL G + +G ++G
Sbjct: 295 GDFLRGNELAVGTLLG 310
>gi|53803079|ref|YP_115238.1| methionyl-tRNA formyltransferase [Methylococcus capsulatus str.
Bath]
gi|73919406|sp|Q603G2|FMT_METCA RecName: Full=Methionyl-tRNA formyltransferase
gi|53756840|gb|AAU91131.1| methionyl-tRNA formyltransferase [Methylococcus capsulatus str.
Bath]
Length = 308
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 124/313 (39%), Positives = 181/313 (57%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFAV TL+AL++S H +VYTQP RPAG RG K S V + A E LP
Sbjct: 1 MRIVFAGTPEFAVPTLRALIASGHPPCAVYTQPDRPAG-RGRKIAPSPVKQLAIEHGLPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E + ++ D+ VVVAYGL++P +L + G N HASLLPRWRGAAP
Sbjct: 60 FQPASLKGPEERERLVALEPDLMVVVAYGLILPTPVLTVPRFGCVNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+AGD ETG+ +M+++ LD GP+ R I + TA L L+ L A ++E
Sbjct: 120 IQRAILAGDRETGVTLMRIEPRLDAGPMLGKRSCSIGDDDTTASLHDRLAGLGAEMLIEL 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L + L Q E+ +TYAEKI K E R+++ + A ++ +RA +P+P A +
Sbjct: 180 LPGLAADRLTGEIQDESQVTYAEKIEKSEARLDWQKDATSLSRRVRAFNPWPVAETTLEG 239
Query: 242 GNKHERIKLLESQLVE--GEGKPGEVIN--PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+++ +Q+++ + PG +I N +AC +GA+RI+ +Q G R + DF
Sbjct: 240 T----VLRIWSAQVLDPAPDAPPGSIIACTKNLDVACGRGALRILEVQPPGKRRMSAKDF 295
Query: 298 LLGCPVIIGCIVG 310
L + G +G
Sbjct: 296 LNAHAL-AGKRLG 307
>gi|251793802|ref|YP_003008534.1| methionyl-tRNA formyltransferase [Aggregatibacter aphrophilus
NJ8700]
gi|247535201|gb|ACS98447.1| methionyl-tRNA formyltransferase [Aggregatibacter aphrophilus
NJ8700]
Length = 318
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 181/316 (57%), Gaps = 9/316 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F+GT +FA LQAL+ S H++++VYTQP +PAG RG K S V + A++ +P
Sbjct: 3 PLNIIFVGTPDFAAQHLQALIDSPHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEQHQIP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E + + +ADV VVVAYGL++PQ +L+A G N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKPETQAELTALHADVMVVVAYGLILPQAVLDAPTYGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD +TG+ IM+MD LDTG + I +A L +L+ + +A++E
Sbjct: 122 PIQRAIWAGDKQTGVTIMQMDAGLDTGDMLHKVFCDIDLQDTSADLYHKLAEIAPNALIE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L PQ + YAEK+SK E ++++ SA + +IRA +P+P A+L++
Sbjct: 182 VLNHLTDGTFIAEPQDDTQSNYAEKLSKEEAKLDWQLSAAQLERNIRAFNPWPMAYLQLT 241
Query: 241 I-GNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++ + PG +I IA + G + +++LQ AG + +
Sbjct: 242 DEQGNPQTLKVYQATVLPSVSQIPGTIISADKNGIQIATADGVLNLLQLQPAGKKPMSAQ 301
Query: 296 DFLLGCP--VIIGCIV 309
D L G +G ++
Sbjct: 302 DLLNGRADWFAVGKVL 317
>gi|53729237|ref|ZP_00133763.2| COG0223: Methionyl-tRNA formyltransferase [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209051|ref|YP_001054276.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
L20]
gi|307250866|ref|ZP_07532794.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|166214869|sp|A3N2N5|FMT_ACTP2 RecName: Full=Methionyl-tRNA formyltransferase
gi|126097843|gb|ABN74671.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|306857116|gb|EFM89244.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 316
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 118/315 (37%), Positives = 186/315 (59%), Gaps = 8/315 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL+ S H++++VYTQP +PAG RG K S V + A++ ++P
Sbjct: 3 KLNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEQHNIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E+ + L DV VVVAYGL++P+ +LNA K G N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKEDAQAELKALNADVMVVVAYGLILPEAVLNAPKYGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + PI+++ +A L +L+ L A++E
Sbjct: 122 PIQRSIWAGDQETGVTIMQMDIGLDTGDMLHKVTTPIAADETSASLYAKLAELAPPALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ LE Q + YAEK+SK E ++++ +A + +IRA +P+P ++L +
Sbjct: 182 VLNGLESQAFKAEKQDDALSNYAEKLSKEEAKLDWNLTACQLERNIRAFNPWPISFLTLE 241
Query: 241 IGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + +K+ ++ ++ + K G V+ IA +G + I +LQ +G + + + D
Sbjct: 242 VDGVEQSVKVYQANVLPHQAKAAGTVLQADKNGIQIATQEGVLNITQLQPSGKKPMSVQD 301
Query: 297 FLLGCP--VIIGCIV 309
FL G +G +
Sbjct: 302 FLNGRADWFAVGKQL 316
>gi|165977023|ref|YP_001652616.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190150918|ref|YP_001969443.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303249884|ref|ZP_07336087.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307246509|ref|ZP_07528581.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307253250|ref|ZP_07535124.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307255495|ref|ZP_07537301.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259946|ref|ZP_07541659.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307262072|ref|ZP_07543726.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307264272|ref|ZP_07545861.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|238687508|sp|B0BRR3|FMT_ACTPJ RecName: Full=Methionyl-tRNA formyltransferase
gi|238692355|sp|B3GYS0|FMT_ACTP7 RecName: Full=Methionyl-tRNA formyltransferase
gi|165877124|gb|ABY70172.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|189916049|gb|ACE62301.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302651275|gb|EFL81428.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306852572|gb|EFM84805.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306859237|gb|EFM91276.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306861537|gb|EFM93525.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865974|gb|EFM97849.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306868251|gb|EFN00074.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306870336|gb|EFN02091.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 316
Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats.
Identities = 119/315 (37%), Positives = 186/315 (59%), Gaps = 8/315 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL+ S H++++VYTQP +PAG RG K S V + A++ ++P
Sbjct: 3 KLNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEQHNIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E+ + L DV VVVAYGL++P+ +LNA K G N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKEDAQAELKALNADVMVVVAYGLILPEAVLNAPKYGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + PI+++ +A L +L+ L A++E
Sbjct: 122 PIQRSIWAGDQETGVTIMQMDIGLDTGDMLHKVTTPIAADETSASLYAKLAELAPPALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ LE Q E YAEK+SK E ++++ +A + +IRA +P+P ++L +
Sbjct: 182 VLNGLESQAFKAEKQDEALSNYAEKLSKEEAKLDWNLTACQLERNIRAFNPWPISFLTLE 241
Query: 241 IGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + +K+ ++ ++ + K G V+ IA +G + I +LQ +G + + + D
Sbjct: 242 VDGVEQSVKVYQANVLPHQAKAAGTVLQADKNGIQIATQEGVLNITQLQPSGKKPMSVQD 301
Query: 297 FLLGCP--VIIGCIV 309
FL G +G +
Sbjct: 302 FLNGRADWFAVGKQL 316
>gi|303253469|ref|ZP_07339611.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248634|ref|ZP_07530648.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302647713|gb|EFL77927.1| methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306854845|gb|EFM87034.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 316
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 119/315 (37%), Positives = 186/315 (59%), Gaps = 8/315 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL+ S H++++VYTQP +PAG RG K S V + A++ ++P
Sbjct: 3 KLNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEQHNIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +EE + L DV VVVAYGL++P+ +LNA K G N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKEEAQAELKALNADVMVVVAYGLILPEAVLNAPKYGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + PI+++ +A L +L+ L A++E
Sbjct: 122 PIQRSIWAGDQETGVTIMQMDIGLDTGDMLHKVTTPIAADETSASLYAKLAELAPPALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ LE Q + YAEK+SK E ++++ +A + +IRA +P+P ++L +
Sbjct: 182 VLNGLESQAFKAEKQDDALSNYAEKLSKEEAKLDWNLTACQLERNIRAFNPWPISFLTLE 241
Query: 241 IGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + +K+ ++ ++ + K G V+ IA +G + I +LQ +G + + + D
Sbjct: 242 VDGVEQSVKVYQANVLPHQAKAAGTVLQADKNGIQIATQEGVLNITQLQPSGKKPMSVQD 301
Query: 297 FLLGCP--VIIGCIV 309
FL G +G +
Sbjct: 302 FLNGRADWFAVGKQL 316
>gi|77359004|ref|YP_338579.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pseudoalteromonas haloplanktis
TAC125]
gi|123587109|sp|Q3IDI3|FMT_PSEHT RecName: Full=Methionyl-tRNA formyltransferase
gi|76873915|emb|CAI85136.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pseudoalteromonas haloplanktis
TAC125]
Length = 321
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 124/319 (38%), Positives = 186/319 (58%), Gaps = 15/319 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT +FA LQAL+ S H IV VY+QP RPAG RG K S V + A E +LP
Sbjct: 4 PLRIIFAGTPDFAARHLQALIQSEHQIVGVYSQPDRPAG-RGKKLKASEVKELALEHNLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E+ L+ D+ +VVAYGL++P+ IL+A +LG N H S+LPRWRGAA
Sbjct: 63 VFQPQSLKTEDALNELTRLNADIMIVVAYGLILPKAILDAPRLGCLNVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD +TG+ IM+M++ LDTG + + + PIS+ +A L +L+ L A+++
Sbjct: 123 PIQRAIWAGDEQTGVTIMQMNEGLDTGDMLHISRCPISATETSASLYTKLADLGPGALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L + PQ + YA+K+SK E +++ SA + +IRA +P+P + +M
Sbjct: 183 TINNLANGKITPEPQNDAAANYAKKLSKDEANIDWSMSAAQIERNIRAFNPWPVCFTQMG 242
Query: 241 IGNKHERIKLLESQLVE-GEGKP---GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ +K+ ++ +VE +P G V+ + C + A+ I +LQ G + +
Sbjct: 243 G----QPVKIYQAHVVEQSSSQPDNNGRVLSSDKNGVIVGCGEHALCITQLQPQGKKPMA 298
Query: 294 IGDFLLGCP--VIIGCIVG 310
I DFL G V G I+G
Sbjct: 299 INDFLNGRSDWVTPGTILG 317
>gi|330985724|gb|EGH83827.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 314
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 124/315 (39%), Positives = 184/315 (58%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S + IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSPYQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P L + + L+ D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VMQPPTLRAPDAQAELAALKPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PI++ L + ++ L A+++
Sbjct: 123 PIQRAVQAGDAESGVTVMQMEAGLDTGPMLLKAVTPITAQDTGGTLHERMAELGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L +L Q ++ YA K++K E R+++ R A+ + IRA +P+P +
Sbjct: 183 AIAGLADGSLVGEVQDDSLANYAHKLNKDEARLDWTRPADELERLIRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PG V+ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 242 ---NEETLKVLAADLAEGQGAPGTVLSASKDGLIVACGQNALRLTRLQLPGGKPLNFADL 298
Query: 298 LLGCP--VIIGCIVG 310
IG ++G
Sbjct: 299 FNSRREKFAIGTVLG 313
>gi|325577100|ref|ZP_08147584.1| methionyl-tRNA formyltransferase [Haemophilus parainfluenzae ATCC
33392]
gi|325160682|gb|EGC72803.1| methionyl-tRNA formyltransferase [Haemophilus parainfluenzae ATCC
33392]
Length = 318
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 184/316 (58%), Gaps = 9/316 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA L AL++S H+I++VYTQP +PAG RG K S V + A++ +P
Sbjct: 3 PLNIIFAGTPDFAAQHLTALLNSHHNIIAVYTQPDKPAG-RGKKLQASPVKQLAEQHQIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +EE + L DV VVVAYGL++PQ +L+ +LG N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKEEAQAELKALNADVMVVVAYGLILPQAVLDMPRLGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD +TG+ IM+MD LDTG + I +A L +L+ + A+++
Sbjct: 122 PIQRSIWAGDQQTGVTIMQMDMGLDTGDMLHKVYCDIDDQETSASLYHKLAEIAPSALID 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D LE+ Q ++ YAEK+SK E ++++ SA + +IRA +P+P ++L++
Sbjct: 182 VLDHLEEGKFIAEKQDDSQSNYAEKLSKEEAKLDWSLSAAQLERNIRAFNPWPISFLQLT 241
Query: 241 I-GNKHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ + ++ KP G ++ IA +G + +++LQ AG + + +
Sbjct: 242 DEQGNEQTLKVYAATVLPHVDKPAGTILSVDKKGIQIATKEGVLNLLQLQPAGKKPMSVQ 301
Query: 296 DFLLGCP--VIIGCIV 309
DFL G +G ++
Sbjct: 302 DFLNGRADWFQVGKVL 317
>gi|163845147|ref|YP_001622802.1| methionyl-tRNA formyltransferase [Brucella suis ATCC 23445]
gi|189044502|sp|A9WW44|FMT_BRUSI RecName: Full=Methionyl-tRNA formyltransferase
gi|163675870|gb|ABY39980.1| methionyl-tRNA formyltransferase [Brucella suis ATCC 23445]
Length = 306
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 165/304 (54%), Positives = 210/304 (69%), Gaps = 1/304 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT EF+V L A++ + +V+ YTQPPRPAGRRGL+ S VH+KA++F +P
Sbjct: 1 MRVVFMGTPEFSVPILTAIIGHGYEVVAAYTQPPRPAGRRGLELTRSPVHEKAEQFGIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G EE + F S ADVA+VVAYGL++P+ IL+A +LG YNGHASLLPRWRGAAP
Sbjct: 61 FTPKSLKGAEEQDVFASLEADVAIVVAYGLLLPKAILDAPRLGCYNGHASLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETG+ IMKMD+ LDTG VA KV I+ ++ L LS++ A M+ A
Sbjct: 121 IQRAIMAGDAETGMMIMKMDEGLDTGLVAMAEKVAITPDMTAGELHDRLSMIGADLMIRA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ +L L PQ E G+TYA KI K E R+++ + A++VHN IR LSPFPGAW EM I
Sbjct: 181 LGALERESLALQPQAEEGVTYAAKIDKAEARIDWSKPAKDVHNSIRGLSPFPGAWCEMEI 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KL S L EG G PG V++ TIAC +GAVR+ LQ +GG+ L +FL G
Sbjct: 241 NGAVERVKLQRSTLGEGSGAPGTVLDDRLTIACGEGAVRLATLQHSGGKPLPAQEFLRGQ 300
Query: 302 PVII 305
V
Sbjct: 301 RVTK 304
>gi|329114448|ref|ZP_08243210.1| Methionyl-tRNA formyltransferase [Acetobacter pomorum DM001]
gi|326696524|gb|EGE48203.1| Methionyl-tRNA formyltransferase [Acetobacter pomorum DM001]
Length = 312
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 124/310 (40%), Positives = 187/310 (60%), Gaps = 7/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +F+V L+AL ++ H IV+VY QPPRPAG RG K S V + A+E L
Sbjct: 1 MRLVFMGTPDFSVPALRALHAAGHEIVAVYCQPPRPAG-RGKKLQASPVQQAAEELGLLV 59
Query: 63 LVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + ++E+ F + AD A+V AYGL++PQ +L+A +LG N HASLLPRWRGA+
Sbjct: 60 RHPLSLRKNEQEWADFAALQADAAIVAAYGLILPQAMLDAPRLGCLNIHASLLPRWRGAS 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI+AGD ++G+ IM+M+ LDTGP+ VPI++ L LS L A
Sbjct: 120 PIQSAILAGDTQSGVTIMQMEAGLDTGPMLLREAVPITATTTATSLHDALSALGADM--- 176
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ + +PQ E G+TYA ++++ + R+++ ++A + IRAL+P+PG + +
Sbjct: 177 -ALRVLADMPAPTPQPEEGVTYAPRLTREDGRIDWAKTATEIDRQIRALTPWPGTFSTLP 235
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
G + + +PG V++ TIAC GAVR+ RLQ+ G ++D FL G
Sbjct: 236 DGTVLKIGAATPLPDTKHSAQPGTVLDDALTIACGNGAVRLNRLQKPGRGMMDADAFLRG 295
Query: 301 CPVIIGCIVG 310
P+ G ++G
Sbjct: 296 QPLAAGTLLG 305
>gi|296104995|ref|YP_003615141.1| methionyl-tRNA formyltransferase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059454|gb|ADF64192.1| methionyl-tRNA formyltransferase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 315
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 125/319 (39%), Positives = 186/319 (58%), Gaps = 15/319 (4%)
Query: 1 MT--LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M+ LR++F GT +FA L AL+SS H +V V+TQP RPAG RG K + S V A+E
Sbjct: 1 MSKTLRIIFAGTPDFAARHLDALLSSGHQVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEH 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP P L +E +Q ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWR
Sbjct: 60 GLPVYQPASLRPQENQQLVADLNADVMVVVAYGLILPKVVLDMPRLGCVNVHGSLLPRWR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPIQR++ AGD ETG+ IMKMD LDTG + + PI+++ +A L +L+ L
Sbjct: 120 GAAPIQRSLWAGDAETGVTIMKMDVGLDTGDMLYKLACPITADDTSATLYDKLADLGPQG 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+++ + +L N Q E +TYAEK+SK E RV++ SA + IRA +P+P +W+
Sbjct: 180 LIKTLQQLADNTATPEVQDETLVTYAEKLSKEEARVDWSLSAAQLERCIRAFNPWPMSWM 239
Query: 238 EMMIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+ + +K+ ++ ++EG +PG +I +A S+G + + LQ AG + +
Sbjct: 240 VI----DEQPVKVWKASVIEGNTSAEPGTIIEASKNGIQVATSEGILNLESLQPAGKKAM 295
Query: 293 DIGDFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 296 SAQDLLNSRREWFIPGSRL 314
>gi|325498856|gb|EGC96715.1| methionyl-tRNA formyltransferase [Escherichia fergusonii ECD227]
Length = 315
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 180/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKILAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIQ 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ + PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTVTKSAPGTILEASKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|194435068|ref|ZP_03067306.1| methionyl-tRNA formyltransferase [Shigella dysenteriae 1012]
gi|194416675|gb|EDX32806.1| methionyl-tRNA formyltransferase [Shigella dysenteriae 1012]
gi|320182715|gb|EFW57601.1| Methionyl-tRNA formyltransferase [Shigella boydii ATCC 9905]
Length = 315
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S + A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPIKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLKMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|193071562|ref|ZP_03052471.1| methionyl-tRNA formyltransferase [Escherichia coli E110019]
gi|192955150|gb|EDV85644.1| methionyl-tRNA formyltransferase [Escherichia coli E110019]
Length = 315
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S + A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPIKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAKLGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|168752264|ref|ZP_02777286.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4113]
gi|188013844|gb|EDU51966.1| methionyl-tRNA formyltransferase [Escherichia coli O157:H7 str.
EC4113]
Length = 320
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 116/315 (36%), Positives = 179/315 (56%), Gaps = 13/315 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +W+E+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWVEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCI 308
D L + G +
Sbjct: 299 DLLNSRREWFVPGTV 313
>gi|332086259|gb|EGI91415.1| methionyl-tRNA formyltransferase [Shigella dysenteriae 155-74]
Length = 315
Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S + A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPIKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLKMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +V+ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVVDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|157156687|ref|YP_001464755.1| methionyl-tRNA formyltransferase [Escherichia coli E24377A]
gi|191169306|ref|ZP_03031055.1| methionyl-tRNA formyltransferase [Escherichia coli B7A]
gi|218555845|ref|YP_002388758.1| methionyl-tRNA formyltransferase [Escherichia coli IAI1]
gi|293453606|ref|ZP_06664025.1| methionyl-tRNA formyltransferase [Escherichia coli B088]
gi|307315134|ref|ZP_07594717.1| methionyl-tRNA formyltransferase [Escherichia coli W]
gi|166988364|sp|A7ZSH6|FMT_ECO24 RecName: Full=Methionyl-tRNA formyltransferase
gi|226704297|sp|B7M0Z3|FMT_ECO8A RecName: Full=Methionyl-tRNA formyltransferase
gi|157078717|gb|ABV18425.1| methionyl-tRNA formyltransferase [Escherichia coli E24377A]
gi|190900661|gb|EDV60461.1| methionyl-tRNA formyltransferase [Escherichia coli B7A]
gi|218362613|emb|CAR00239.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli IAI1]
gi|291321732|gb|EFE61163.1| methionyl-tRNA formyltransferase [Escherichia coli B088]
gi|306905483|gb|EFN36018.1| methionyl-tRNA formyltransferase [Escherichia coli W]
gi|315062579|gb|ADT76906.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli W]
gi|320199475|gb|EFW74065.1| Methionyl-tRNA formyltransferase [Escherichia coli EC4100B]
gi|323182766|gb|EFZ68167.1| methionyl-tRNA formyltransferase [Escherichia coli 1357]
gi|323376834|gb|ADX49102.1| methionyl-tRNA formyltransferase [Escherichia coli KO11]
gi|323944292|gb|EGB40368.1| methionyl-tRNA formyltransferase [Escherichia coli H120]
Length = 315
Score = 199 bits (505), Expect = 6e-49, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S + A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPIKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|326203180|ref|ZP_08193046.1| methionyl-tRNA formyltransferase [Clostridium papyrosolvens DSM
2782]
gi|325986826|gb|EGD47656.1| methionyl-tRNA formyltransferase [Clostridium papyrosolvens DSM
2782]
Length = 312
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 99/312 (31%), Positives = 162/312 (51%), Gaps = 5/312 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT EFAV +L+ L++ + +++V TQP +P G RG K V + A + +
Sbjct: 1 MKIIFMGTPEFAVPSLEMLINEGYEVIAVVTQPDKPKG-RGNKLAAPPVKEFALKHGITV 59
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P E EQ + D+ + AYG +I + +L+ LG N H SLLP +RGAAP
Sbjct: 60 LQPSKIKTPEFVEQIRNLAPDLLITAAYGKIISKEMLDVPTLGCINVHGSLLPAYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ +I+ G+ TGI M D LDTG + +++ I S++ L ++VL A + E
Sbjct: 120 IQWSIINGEKVTGITTMFTDVGLDTGDMLLKKELEIGSDMTAGELHDAMAVLGAQVLKET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L+Q L Q ++ +YA I+K +++ ++A+ VH+ +R SP+PGA+ +
Sbjct: 180 LSELKQGTLIRKQQEDSLSSYAPIITKEVGLIDWNKTAQQVHDLVRGTSPWPGAYTFLNE 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
L PGE++ I CS G + I LQ + + + D+L
Sbjct: 240 SKMRVWKTCLSDLENNQNYCPGEIVRVDESGLLIKCSDGYIIISELQFDSSKRMKVSDYL 299
Query: 299 LGCPVIIGCIVG 310
G + IG +G
Sbjct: 300 RGHKISIGEKLG 311
>gi|188492657|ref|ZP_02999927.1| methionyl-tRNA formyltransferase [Escherichia coli 53638]
gi|188487856|gb|EDU62959.1| methionyl-tRNA formyltransferase [Escherichia coli 53638]
Length = 315
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S + A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPIKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|283835705|ref|ZP_06355446.1| hypothetical protein CIT292_10097 [Citrobacter youngae ATCC 29220]
gi|291068384|gb|EFE06493.1| methionyl-tRNA formyltransferase [Citrobacter youngae ATCC 29220]
Length = 315
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 114/316 (36%), Positives = 180/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E +P
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLHADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD+ETG+ IM+MD LDTG + PI+++ +A L +L+ L ++
Sbjct: 123 PIQRSLWAGDSETGVTIMQMDVGLDTGDMLHKLSCPITADDTSASLYDKLAELGPQGLLH 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L Q E+ ++YAEK+SK E RV++ SA + IRA +P+P +++ +
Sbjct: 183 TLQLLASGTAKPEVQDESLVSYAEKLSKEEARVDWTLSAAQLERCIRAFNPWPMSYIVI- 241
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ +PG ++ +A G + ++ LQ AG + +
Sbjct: 242 ---DEQPVKIWQATVIDTPANAEPGTILEANRQGIQVATGDGILNLISLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 299 DLLNSRREWFEPGNRL 314
>gi|15603425|ref|NP_246499.1| methionyl-tRNA formyltransferase [Pasteurella multocida subsp.
multocida str. Pm70]
gi|13431515|sp|P57949|FMT_PASMU RecName: Full=Methionyl-tRNA formyltransferase
gi|12721952|gb|AAK03644.1| Fmt [Pasteurella multocida subsp. multocida str. Pm70]
Length = 317
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 118/316 (37%), Positives = 183/316 (57%), Gaps = 9/316 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+L+++F GT FA LQAL++S H +V+VYTQP +PAG RG K S V + A++ ++P
Sbjct: 3 SLKIIFAGTPAFAAQHLQALLNSHHQVVAVYTQPDKPAG-RGKKLQASPVKQLAEQHNIP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E E+ + +ADV VVVAYGL++PQ +L +LG N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKVEAQEEMRAIDADVMVVVAYGLILPQTVLAMPRLGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD +TGI IM+MD+ LDTG + + I+ + + L +L + A++
Sbjct: 122 PIQRAIWAGDKQTGITIMQMDEGLDTGDMLYKVYCDIAQDETSTSLYAKLMEIAPPALLH 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL-EM 239
+D L++ Q + YAEK+SK E +N+ SAE + HIRA +P+P ++
Sbjct: 182 VLDGLDKGKFVSEKQDDIESCYAEKLSKEEAELNWHVSAEQLERHIRAFNPWPVSYFSTR 241
Query: 240 MIGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + IK+ ++ ++ K G ++ IA ++G + +++LQ AG + +D
Sbjct: 242 DLQGNTQVIKVYKAAVLPHVDKVAGTILSADKNGIQIATAEGVLNLLQLQPAGKKPMDAR 301
Query: 296 DFLLGCP--VIIGCIV 309
D L G +G ++
Sbjct: 302 DLLNGRAEWFPVGKVL 317
>gi|170769544|ref|ZP_02903997.1| methionyl-tRNA formyltransferase [Escherichia albertii TW07627]
gi|170121601|gb|EDS90532.1| methionyl-tRNA formyltransferase [Escherichia albertii TW07627]
Length = 315
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 181/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 IFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKTVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITTEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTVKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ + PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATKAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|307257665|ref|ZP_07539424.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306863840|gb|EFM95764.1| Methionyl-tRNA formyltransferase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 316
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 119/315 (37%), Positives = 183/315 (58%), Gaps = 8/315 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL+ S H++++VYTQP +PAG RG K S V + A++ ++P
Sbjct: 3 KLNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEQHNIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +EE + L DV VVVAYGL++P+ +LNA K G N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKEEAQAELKALNADVMVVVAYGLILPEAVLNAPKYGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + PI++ +A L +L+ L A++E
Sbjct: 122 PIQRSIWAGDQETGVTIMQMDIGLDTGDMLHKVTTPIAAEETSASLYAKLAELAPPALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ LE Q + YAEK+SK E ++++ +A + +IRA P+P ++L +
Sbjct: 182 VLNGLESQAFKAEKQDDALSNYAEKLSKEEAKLDWNLTACQLERNIRAFKPWPISFLTLE 241
Query: 241 IGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + +K+ ++ ++ + K G V+ IA G + I +LQ +G + + + D
Sbjct: 242 VDGVEQSVKVYQANVLPHQAKAAGTVLQADRNGIQIATQDGVLNITQLQPSGKKPMSVQD 301
Query: 297 FLLGCP--VIIGCIV 309
FL G +G +
Sbjct: 302 FLNGRADWFAVGKQL 316
>gi|301155308|emb|CBW14774.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet )
N-formyltransferase [Haemophilus parainfluenzae T3T1]
Length = 318
Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 185/316 (58%), Gaps = 9/316 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA L AL++S H+I++VYTQP +PAG RG K S V + A++ +P
Sbjct: 3 PLNIIFAGTPDFAAQHLAALLNSHHNIIAVYTQPDKPAG-RGKKLQASPVKQLAEQHQIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +EE + L DV VVVAYGL++PQ +L+ +LG N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKEEAQAELKALNADVMVVVAYGLILPQAVLDMPRLGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD +TG+ IM+MD LDTG + I + +A L +L+ + A+++
Sbjct: 122 PIQRSIWAGDQQTGVTIMQMDAGLDTGDMLHKVYCDIDAQETSASLYHKLAEIAPSALID 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D LE+ Q ++ YAEK+SK E ++++ SA + +IRA +P+P ++L++
Sbjct: 182 VLDHLEEGKFIAEKQDDSQSNYAEKLSKEEAKLDWSLSAVQLERNIRAFNPWPISFLQLT 241
Query: 241 I-GNKHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ + ++ KP G ++ IA +G + +++LQ AG + + +
Sbjct: 242 DEQGNEQTLKIYAAAVLPHVDKPAGTILSVDKKGIQIATKEGVLNLLQLQPAGKKPMSVQ 301
Query: 296 DFLLGCP--VIIGCIV 309
DFL G +G ++
Sbjct: 302 DFLNGRADWFQVGKVL 317
>gi|56698048|ref|YP_168419.1| methionyl-tRNA formyltransferase [Ruegeria pomeroyi DSS-3]
gi|73919418|sp|Q5LNI8|FMT_SILPO RecName: Full=Methionyl-tRNA formyltransferase
gi|56679785|gb|AAV96451.1| methionyl-tRNA formyltransferase [Ruegeria pomeroyi DSS-3]
Length = 301
Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats.
Identities = 155/308 (50%), Positives = 193/308 (62%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT +F+V L+ALV++ H I +VY QPPRPAG RG K + VH +A + L
Sbjct: 1 MRVVFMGTPDFSVPVLEALVAAGHEIAAVYCQPPRPAG-RGKKDRPTPVHARALDLGLEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G E F + ADVAVVVAYGL++PQ +L+A + G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKGAEAQADFAALGADVAVVVAYGLILPQAVLDAPRHGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD TGI IM+M+ LDTGPV + PI + T L LS + A +VEA
Sbjct: 120 IHRAIMAGDEATGICIMQMEAGLDTGPVLLRSRTPIRAEETTGALHDRLSAMGADLIVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L PQ E+G+TYA KI K E RV++ R A + IR LSPFPGAW E+
Sbjct: 180 L--ARLPELTPEPQPEDGVTYAAKIDKAEARVDWTRPAVAIDRQIRGLSPFPGAWTEIAG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KLL S+L EG+G PGEV++ TIAC GA+ ++RLQRAG D FL G
Sbjct: 238 ----ERVKLLASRLDEGQGTPGEVLDDALTIACGTGAISLIRLQRAGKAAQDADIFLRGW 293
Query: 302 PVIIGCIV 309
PV G +
Sbjct: 294 PVPKGTRL 301
>gi|260583338|ref|ZP_05851111.1| methionyl-tRNA formyltransferase [Haemophilus influenzae NT127]
gi|260093609|gb|EEW77524.1| methionyl-tRNA formyltransferase [Haemophilus influenzae NT127]
Length = 318
Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats.
Identities = 113/318 (35%), Positives = 182/318 (57%), Gaps = 10/318 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQA+++S H++++VYTQP +PAG RG K S V + A++ +
Sbjct: 1 MKSLNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEQNN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P L +EE + L DV VVVAYGL++P+ +L+A +LG N H S+LPRWRG
Sbjct: 60 IPVYQPKSLRKEEAQSELKALNADVMVVVAYGLILPKAVLDAPRLGCLNVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQR+I AGD +TG+ IM+MD+ LDTG + I + L +L+ A+
Sbjct: 120 AAPIQRSIWAGDVQTGVTIMQMDEGLDTGDMLHKVYCDILPTETSTSLYNKLAEFAPSAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ +D LE Q + YAEK+SK E ++++ A + +IRA +P+P A+
Sbjct: 180 IDVLDNLENGKFIAEKQDGSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIAYFS 239
Query: 239 MMIGN-KHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + +K+ +++++ + KP G ++ IA G + +++LQ AG + +
Sbjct: 240 TEDKDGNAQTLKVYQAEVLPHQDKPAGTILSADKNGIQIATVDGVLNLLQLQPAGKKPMS 299
Query: 294 IGDFLLGCP--VIIGCIV 309
D L G IG ++
Sbjct: 300 AQDLLNGRAEWFTIGKVL 317
>gi|197302408|ref|ZP_03167464.1| hypothetical protein RUMLAC_01136 [Ruminococcus lactaris ATCC
29176]
gi|197298529|gb|EDY33073.1| hypothetical protein RUMLAC_01136 [Ruminococcus lactaris ATCC
29176]
Length = 328
Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats.
Identities = 99/328 (30%), Positives = 168/328 (51%), Gaps = 26/328 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT +F+V TL+AL+ + H + V TQP +P G RG + + V A + +P
Sbjct: 2 MKIIFMGTPDFSVGTLEALIEAGHEVCLVVTQPDKPKG-RGKEMQPTPVKAAAMKHGIPV 60
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ E + + ADV VV+A+G ++P+ IL T G N HASLLP++RGAAP
Sbjct: 61 YQPKKIRDPECVEELRKYQADVMVVIAFGQILPKSILEMTPYGCINVHASLLPKYRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ AI+ G++ TG+ M+MD+ LDTG + +V I+ + L +L+ A VE
Sbjct: 121 IQWAIINGESVTGVTTMQMDEGLDTGDMIQKTEVEITPDETGESLHDKLAAAGAALCVET 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E + Q E+ YA + K +++ RSA + +R L+ +P A+
Sbjct: 181 LKAVETHTATFEKQGESPTAYARMLDKKLGNIDWSRSAVEIERLVRGLNSWPSAYT---- 236
Query: 242 GNKHERIKLLESQLVEGEG-----------------KPGEVI---NPNFTIACSQGAVRI 281
+ +K+ +++ G G G V+ +FT+ +G +++
Sbjct: 237 HWDGKVMKIWKAKAEPGAGVQAGGTETEKFQGESQTVAGTVVAVEKDSFTVQTGEGRLKV 296
Query: 282 MRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
++LQ G + +D FL G + G +
Sbjct: 297 LQLQIPGKKRMDADAFLRGYSLKPGTVF 324
>gi|331649084|ref|ZP_08350170.1| methionyl-tRNA formyltransferase [Escherichia coli M605]
gi|330909332|gb|EGH37846.1| methionyl-tRNA formyltransferase [Escherichia coli AA86]
gi|331041582|gb|EGI13726.1| methionyl-tRNA formyltransferase [Escherichia coli M605]
Length = 315
Score = 198 bits (504), Expect = 7e-49, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H+IV V+TQP RPAG RG K + S V A++ LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAG-RGKKLMPSPVKVLAEDKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IR +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRTFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ + PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTVTKSAPGTILEASKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|331684930|ref|ZP_08385516.1| methionyl-tRNA formyltransferase [Escherichia coli H299]
gi|331077301|gb|EGI48513.1| methionyl-tRNA formyltransferase [Escherichia coli H299]
Length = 315
Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSDHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|257485585|ref|ZP_05639626.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|331011874|gb|EGH91930.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 314
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 125/315 (39%), Positives = 183/315 (58%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S + IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSPYQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P L + + L+ D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VMQPPTLRAPDAQAELAALKPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PI++ L L+ L A+++
Sbjct: 123 PIQRAVQAGDAESGVTVMQMEAGLDTGPMLLKAVTPITAQDTGGTLHDRLAELGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L +L Q ++ YA K++K E R+++ R A+ + IRA +P+P +
Sbjct: 183 AIAGLADGSLVGEVQDDSLANYAHKLNKDEARLDWTRPADELERLIRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PG V+ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 242 ---NEETLKVLAADLAEGQGAPGTVLSASKDGLIVACGQNALRLTRLQLPGGKPLNFADL 298
Query: 298 LLGCP--VIIGCIVG 310
IG ++G
Sbjct: 299 FNSRREKFAIGTVLG 313
>gi|296133299|ref|YP_003640546.1| methionyl-tRNA formyltransferase [Thermincola sp. JR]
gi|296031877|gb|ADG82645.1| methionyl-tRNA formyltransferase [Thermincola potens JR]
Length = 321
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 106/314 (33%), Positives = 167/314 (53%), Gaps = 8/314 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT +FAV L+ LV + H +V V TQP RP G RG K + V AQE L
Sbjct: 1 MKIIFMGTPDFAVPCLKELVKTGHDVVQVITQPDRPKG-RGRKLMPPPVKVTAQELGLQV 59
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ E E+ D VVVA+G ++ + IL + G N HAS+LP++RGAAP
Sbjct: 60 YQPDKIKAPEAVEKIRELAPDAIVVVAFGQLLSRDILAIPRFGCINVHASILPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G+ E+G++IM MD+ LDTG V + K PI+ + T L +L+ L A A++ A
Sbjct: 120 IHWAVINGEKESGVSIMYMDEGLDTGDVVLVEKTPIAESDTTGILHDKLAFLGARALLRA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM-- 239
+D + + PQ ++ +YA + KG +++ +++ + + +R L+P+P A+
Sbjct: 180 LDLIARGEARRIPQDDSAASYAPLLDKGVELIDWHKTSRQIKDLVRGLNPWPVAYTYFGE 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
I E +G +PG +I +A GAV I LQ G + +
Sbjct: 240 KILKIWTVDVAGEETAADGPFRPGRIIKVVPEEGIYVASGDGAVIIKELQLQGSKKMSAE 299
Query: 296 DFLLGCPVIIGCIV 309
DF+ G + G I+
Sbjct: 300 DFIRGRRIEPGTIL 313
>gi|209920753|ref|YP_002294837.1| methionyl-tRNA formyltransferase [Escherichia coli SE11]
gi|238065928|sp|B6I201|FMT_ECOSE RecName: Full=Methionyl-tRNA formyltransferase
gi|209914012|dbj|BAG79086.1| methionyl-tRNA formyltransferase [Escherichia coli SE11]
gi|324116323|gb|EGC10243.1| methionyl-tRNA formyltransferase [Escherichia coli E1167]
Length = 315
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 118/316 (37%), Positives = 180/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++VSV+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVSVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|291542592|emb|CBL15702.1| methionyl-tRNA formyltransferase [Ruminococcus bromii L2-63]
Length = 305
Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats.
Identities = 105/310 (33%), Positives = 173/310 (55%), Gaps = 7/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++++MGT +FAV L+AL +S H + +V+TQP +P G R + V A++ ++P
Sbjct: 1 MKIIYMGTPDFAVPALKALANSEHEVCAVFTQPDKPRG-RKMIMTPPDVKVCAEKLNIPV 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + E +N DV VV AYG ++P+ +L++ K G N H SLLP++RGA+P
Sbjct: 60 YQPETFKDGKPLEIINKYNPDVIVVAAYGKILPKSVLDSAKYGCINLHGSLLPKYRGASP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ++++ GD ETG+ M+MD LDTG + + K I N + L LS++ +++
Sbjct: 120 IQQSVLNGDRETGVTAMQMDVGLDTGDILKVVKTEIGVNETSGELFDRLSLMGGELILDT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ + Q E+ T+ KI K ++F + A VHN IR L+P+P A E+
Sbjct: 180 LSALEKGEITPIKQDESLATHTSKIDKSLCPIDFTKPAFEVHNKIRGLNPWPIATTEI-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
++IK+ S L E GK G VI+ +AC + +V + +Q G + + FL G
Sbjct: 238 --NGKKIKVHSSLLCEKSGKAGTVISTKPLIVACGEKSVELCEIQPEGKKKMTAEAFLAG 295
Query: 301 CPVIIGCIVG 310
+ +G ++G
Sbjct: 296 HRLSVGDVIG 305
>gi|298290075|ref|YP_003692014.1| methionyl-tRNA formyltransferase [Starkeya novella DSM 506]
gi|296926586|gb|ADH87395.1| methionyl-tRNA formyltransferase [Starkeya novella DSM 506]
Length = 305
Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats.
Identities = 155/308 (50%), Positives = 209/308 (67%), Gaps = 5/308 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV+TL +V S H +V+ YT+ P +GRRGL+ V S VH+ A++ +P
Sbjct: 1 MRIVFMGTPDFAVSTLAEIVGSGHEVVAAYTRAPAASGRRGLELVPSPVHRAAEKLGVPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P+ +E E F + ADVAVVVAYG ++PQ IL+A KLG N HASLLPRWRGAAP
Sbjct: 61 LTPSTLRTEEAAETFAAHEADVAVVVAYGRILPQMILDAPKLGCLNLHASLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD E+G+A+MKM+ LDTGPV + +V I +++ L L ++ A M A
Sbjct: 121 IQRAIMAGDAESGVAVMKMEAGLDTGPVGLVERVAIGADMTAGELHDRLMIVGADLMGRA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ L +PQ E G+TYA KI KGETR+++ + A+ VH+HIR LSPFPGAW E
Sbjct: 181 LAALERGALNFTPQPEAGVTYAAKIDKGETRIDWSKPAKQVHDHIRGLSPFPGAWFEF-- 238
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
R+K+L S LV G G+PGEVI+ TIAC+ GAVR+ +Q+AG + + DFL G
Sbjct: 239 --DGVRVKVLRSTLVAGAGRPGEVIDDQLTIACADGAVRLTEVQKAGSKAMGAADFLRGN 296
Query: 302 PVIIGCIV 309
+ G ++
Sbjct: 297 ELTRGTVL 304
>gi|330965123|gb|EGH65383.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 314
Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats.
Identities = 125/315 (39%), Positives = 183/315 (58%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S H IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSPHQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P L E + L+ D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VMQPPTLRAPEAQAELAALKPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PI++ L L+ L A+++
Sbjct: 123 PIQRAVQAGDAESGVTVMRMEAGLDTGPMLLKAVTPITAQDTGGTLHDRLAELGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L +L Q ++ YA K++K E R+++ R A+ + +RA +P+P +
Sbjct: 183 AIAGLADGSLIGEVQDDSLANYAHKLNKDEARIDWTRPADELERLVRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PG ++ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 242 ---NEEALKVLAADLAEGQGAPGTILSASKDGLIVACGQNALRLTRLQLPGGKPLNFTDL 298
Query: 298 LLGCP--VIIGCIVG 310
IG ++G
Sbjct: 299 FNSRREKFAIGTVLG 313
>gi|196247687|ref|ZP_03146389.1| methionyl-tRNA formyltransferase [Geobacillus sp. G11MC16]
gi|196212471|gb|EDY07228.1| methionyl-tRNA formyltransferase [Geobacillus sp. G11MC16]
Length = 321
Score = 198 bits (503), Expect = 9e-49, Method: Composition-based stats.
Identities = 105/318 (33%), Positives = 163/318 (51%), Gaps = 11/318 (3%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M + +VFMGT +FAV L+ L+ + +V+V TQP +P G R + V V +AQ+
Sbjct: 1 MLMTNIVFMGTPDFAVPVLRQLLDDGYRVVAVVTQPDKPKG-RKRELVPPPVKVEAQKHG 59
Query: 60 LPALVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L PTK+ + E + + +F D+ V A+G ++P+ +L+A K G N HASLLP RG
Sbjct: 60 IPVLQPTKIREPEQYEQVLAFAPDLIVTAAFGQILPKALLDAPKYGCINVHASLLPELRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API AI G +TG+ IM M + LD G + +VPI L +LS A +
Sbjct: 120 GAPIHYAIWQGKTKTGVTIMYMAEKLDAGDMLTQVEVPIEETDTVGTLHDKLSAAGAKLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
E + L + NL PQ E TYA I + + R+++ + E ++NHIRA P+P +
Sbjct: 180 SETLPLLLEGNLAPIPQEEEKATYAPNIRREQERIDWAQPGEAIYNHIRAFHPWPVTYTT 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACS-QGAVRIMRLQRAGGRVLDI 294
+I E PG +++ +A + A++I LQ AG + +
Sbjct: 240 Y--DGNVWKIWWGEKVPAPSLASPGTILSLEEDGIVVATGSETAIKITELQPAGKKRMAA 297
Query: 295 GDFLLGC--PVIIGCIVG 310
+FL G + +G +G
Sbjct: 298 SEFLRGAGSRLAVGTKLG 315
>gi|28867418|ref|NP_790037.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213968426|ref|ZP_03396569.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. tomato
T1]
gi|301384286|ref|ZP_07232704.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. tomato
Max13]
gi|302060152|ref|ZP_07251693.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. tomato
K40]
gi|302130425|ref|ZP_07256415.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|33516856|sp|Q88B42|FMT_PSESM RecName: Full=Methionyl-tRNA formyltransferase
gi|28850652|gb|AAO53732.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213926714|gb|EEB60266.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. tomato
T1]
gi|331017688|gb|EGH97744.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 314
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 126/315 (40%), Positives = 184/315 (58%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S H IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSPHQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P L E + L+ D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VMQPPTLRAPEAQAELAALKPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PIS+ L L+ L A+++
Sbjct: 123 PIQRAVQAGDAESGVTVMRMEAGLDTGPMLLKAVTPISAQDTGGTLHDRLAELGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L + +L Q ++ YA K++K E R+++ R A+ + +RA +P+P +
Sbjct: 183 AIAGLAEGSLVGEAQDDSLANYAHKLNKDEARIDWTRPADELERLVRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PG ++ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 242 ---NEEALKVLAADLAEGQGAPGTILSASKDGLIVACGQNALRLTRLQLPGGKPLNFTDL 298
Query: 298 LLGCP--VIIGCIVG 310
IG ++G
Sbjct: 299 FNSRREKFAIGTVLG 313
>gi|319897840|ref|YP_004136037.1| methionyl-tRNA formyltransferase [Haemophilus influenzae F3031]
gi|309973884|gb|ADO97085.1| Methionyl-tRNA formyltransferase [Haemophilus influenzae R2846]
gi|317433346|emb|CBY81724.1| methionyl-tRNA formyltransferase [Haemophilus influenzae F3031]
Length = 318
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 113/318 (35%), Positives = 183/318 (57%), Gaps = 10/318 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQA+++S H++++VYTQP +PAG RG K S V + A++ +
Sbjct: 1 MKSLNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEQNN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P L +EE + L DV VVVAYGL++P+ +L+A +LG N H S+LPRWRG
Sbjct: 60 IPVYQPKSLRKEEAQSELKALNADVMVVVAYGLILPKAVLDAPRLGCLNVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQR+I AGD +TG+ IM+MD+ LDTG + I + L +L+ L +
Sbjct: 120 AAPIQRSIWAGDVQTGVTIMQMDEGLDTGDMLHKVYCDILPTETSTSLYNKLAELAPSVL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ +D LE + Q + YAEK+SK E ++++ A + +IRA +P+P A+
Sbjct: 180 IDVLDNLENSKFIAEKQDGSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIAYFS 239
Query: 239 MMIGN-KHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + +K+ +++++ + KP G ++ IA G + +++LQ AG + +
Sbjct: 240 TEDKDGNAQTLKVYQAEVLPHQDKPAGTILSADKNGIQIATVDGVLNLLQLQPAGKKPMS 299
Query: 294 IGDFLLGCP--VIIGCIV 309
D L G IG ++
Sbjct: 300 AQDLLNGRAEWFTIGKVL 317
>gi|330876379|gb|EGH10528.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 314
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 125/315 (39%), Positives = 184/315 (58%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S H IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSPHQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P L E + L+ D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VMQPPTLRAPEAQAELAALKPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PI++ L L+ L A+++
Sbjct: 123 PIQRAVQAGDAESGVTVMRMEAGLDTGPMLLKAVTPITAQDTGGTLHDRLAELGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L + +L Q ++ YA K++K E R+++ R A+ + +RA +P+P +
Sbjct: 183 AIAGLAEGSLIGEVQDDSLANYAHKLNKDEARIDWTRPADELERLVRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PG ++ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 242 ---NEEALKVLAADLAEGQGAPGTILSASKDGLIVACGQNALRLTRLQLPGGKPLNFTDL 298
Query: 298 LLGCP--VIIGCIVG 310
IG ++G
Sbjct: 299 FNSRREKFAIGTVLG 313
>gi|295399763|ref|ZP_06809744.1| methionyl-tRNA formyltransferase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294978166|gb|EFG53763.1| methionyl-tRNA formyltransferase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 318
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 102/315 (32%), Positives = 164/315 (52%), Gaps = 10/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT +F+V L+ L+ + I +V TQP +P G R + V +A++ +P
Sbjct: 2 INIVFMGTPDFSVPILKRLIEDGYHIAAVVTQPDKPKG-RKRELTPPPVKVEAEKHGIPV 60
Query: 63 LVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L PTK+ ++E + + + D+ V A+G ++P+ +L A K G N HASLLP RG AP
Sbjct: 61 LQPTKIREQEQYEQILALEPDLIVTAAFGQILPKALLEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G +TG+ IM M + LD G + +VPI+ L +LS+ A + E
Sbjct: 121 IHYAILQGKTKTGVTIMYMAEKLDAGDILTQVEVPITETDTVGTLHDKLSIAGAKLLSET 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L L Q E TYA I + + ++++ + E+V+NHIR L+P+P A+
Sbjct: 181 IPQLVAGKLTPVKQEEEKATYAYNIKREQEKIDWTKPGEDVYNHIRGLNPWPVAYTTY-- 238
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACS-QGAVRIMRLQRAGGRVLDIGDF 297
+I E +PG +I+ +A + A++I LQ AG + +D F
Sbjct: 239 YGNIWKIWWGEKVPAPKNAEPGTIIDIAHDGIVVATGNETAIKITELQPAGKKRMDAAQF 298
Query: 298 LL--GCPVIIGCIVG 310
L G + IG +G
Sbjct: 299 LRGAGAHLTIGMKLG 313
>gi|145633870|ref|ZP_01789591.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 3655]
gi|145635939|ref|ZP_01791625.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittAA]
gi|229845580|ref|ZP_04465707.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 6P18H1]
gi|144985242|gb|EDJ92085.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 3655]
gi|145266798|gb|EDK06816.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittAA]
gi|229811515|gb|EEP47217.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 6P18H1]
Length = 318
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 114/318 (35%), Positives = 184/318 (57%), Gaps = 10/318 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQA+++S H++++VYTQP +PAG RG K S V + A++ +
Sbjct: 1 MKSLNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEQNN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P L +EE + L DV VVVAYGL++P+ +L+A +LG N H S+LPRWRG
Sbjct: 60 IPVYQPKSLRKEEAQSELKALNADVMVVVAYGLILPKAVLDAPRLGCLNVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQR+I AGD +TG+ IM+MD+ LDTG + I + L +L+ L A+
Sbjct: 120 AAPIQRSIWAGDVQTGVTIMQMDEGLDTGDMLHKVYCDILPTETSTSLYNKLAELAPSAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ +D LE + Q + YAEK+SK E ++++ A + +IRA +P+P A+
Sbjct: 180 IDVLDNLENSKFIAEKQDGSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIAYFS 239
Query: 239 MMIGN-KHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + +K+ +++++ + KP G ++ IA G + +++LQ AG + +
Sbjct: 240 TEDKDGNAQTLKVYQAEVLPHQDKPAGTILSADKNGIQIATVDGVLNLLQLQPAGKKPMS 299
Query: 294 IGDFLLGCP--VIIGCIV 309
D L G IG ++
Sbjct: 300 AQDLLNGRAEWFTIGKVL 317
>gi|210622389|ref|ZP_03293142.1| hypothetical protein CLOHIR_01090 [Clostridium hiranonis DSM 13275]
gi|210154271|gb|EEA85277.1| hypothetical protein CLOHIR_01090 [Clostridium hiranonis DSM 13275]
Length = 309
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 94/313 (30%), Positives = 161/313 (51%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT + AV LQ L+ H I++V TQP +P G RG K + V + A E +P
Sbjct: 1 MKVVFMGTPDIAVPCLQKLIDEKHDILAVVTQPDKPKG-RGKKLAMPPVKELAVEHDIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + +E + N D+ VVVA+G ++P+ IL K G N H SLLP++RGAAP
Sbjct: 60 YQPVRARDEEFVQTIKEINPDLIVVVAFGQILPKEILEVPKFGCVNVHVSLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I I+ G+ +TG+ M MD+ LDTG + R+ + I L + V A + E
Sbjct: 120 INWVIINGEEKTGVTTMYMDEGLDTGDMILTREFKLDDQITAGELHDIMMVEGAEVLKET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + + P Q TYA + K V+F +++ +HN +R ++P+P A+
Sbjct: 180 VDLIAEGKAPRIQQNHAEFTYAPTMDKELGHVDFSKTSREIHNLVRGVNPWPSAYAIYNE 239
Query: 242 GNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
G ++K+ +++++ +PG ++ ++ G + I +Q + + + +
Sbjct: 240 G----KMKIWKTEVLNETSNKEPGTILGTDKMGIKVSTGDGVILIKEMQMPNKKRMPVSE 295
Query: 297 FLLGCPVIIGCIV 309
++ G V G ++
Sbjct: 296 YIKGNSVETGAVL 308
>gi|24114565|ref|NP_709075.1| methionyl-tRNA formyltransferase [Shigella flexneri 2a str. 301]
gi|30064609|ref|NP_838780.1| methionyl-tRNA formyltransferase [Shigella flexneri 2a str. 2457T]
gi|110807135|ref|YP_690655.1| methionyl-tRNA formyltransferase [Shigella flexneri 5 str. 8401]
gi|39931272|sp|Q83PZ0|FMT_SHIFL RecName: Full=Methionyl-tRNA formyltransferase
gi|122957163|sp|Q0T015|FMT_SHIF8 RecName: Full=Methionyl-tRNA formyltransferase
gi|24053760|gb|AAN44782.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Shigella flexneri 2a str. 301]
gi|30042868|gb|AAP18591.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Shigella flexneri 2a str. 2457T]
gi|110616683|gb|ABF05350.1| methionyl-tRNA formyltransferase [Shigella flexneri 5 str. 8401]
gi|281602656|gb|ADA75640.1| Methionyl-tRNA formyltransferase [Shigella flexneri 2002017]
gi|313648790|gb|EFS13230.1| methionyl-tRNA formyltransferase [Shigella flexneri 2a str. 2457T]
gi|332749604|gb|EGJ80021.1| methionyl-tRNA formyltransferase [Shigella flexneri K-671]
gi|332749747|gb|EGJ80162.1| methionyl-tRNA formyltransferase [Shigella flexneri 4343-70]
gi|332754002|gb|EGJ84375.1| methionyl-tRNA formyltransferase [Shigella flexneri 2747-71]
gi|332766529|gb|EGJ96736.1| methionyl-tRNA formyltransferase [Shigella flexneri 2930-71]
gi|332998312|gb|EGK17912.1| methionyl-tRNA formyltransferase [Shigella flexneri K-218]
gi|333012484|gb|EGK31865.1| methionyl-tRNA formyltransferase [Shigella flexneri K-304]
Length = 315
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S + A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPIKVLAEEEGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINIHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|332998301|gb|EGK17902.1| methionyl-tRNA formyltransferase [Shigella flexneri VA-6]
Length = 315
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S + A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPIKVLAEEEGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|85713818|ref|ZP_01044808.1| methionyl-tRNA formyltransferase [Nitrobacter sp. Nb-311A]
gi|85699722|gb|EAQ37589.1| methionyl-tRNA formyltransferase [Nitrobacter sp. Nb-311A]
Length = 310
Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats.
Identities = 147/305 (48%), Positives = 196/305 (64%), Gaps = 2/305 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++FMGT +FAV TL LV+ H I +VYT+ R AG RG+K + V ++AQ +
Sbjct: 1 MPLRLIFMGTPDFAVPTLLQLVAHGHEIAAVYTREARAAG-RGMKLRPTPVAREAQRLGI 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P E +F SF AD AVVVAYG+++PQ IL+A + G YN HASLLPRWRGA
Sbjct: 60 PVLTPKTLKTPEALLEFQSFAADAAVVVAYGMILPQAILDAPRYGCYNLHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API RAIM GD E+G+ +MKMD LDTG VA +P++ + + L L+ L A MV
Sbjct: 120 APINRAIMTGDAESGVMVMKMDAGLDTGDVALTSGLPVTDAMTASDLHDALAPLGADLMV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
AMD L + LPL+ Q E G+TYA KI K E R+++ R A V HI LSPFPGAW EM
Sbjct: 180 RAMDALSRGELPLTRQSEQGVTYAAKIDKAEARIDWNRPACEVLRHIHGLSPFPGAWCEM 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ + R+K+L ++ +G G PG++++ TIAC +GA+R++ LQRAG + FL
Sbjct: 240 PVDGEPTRVKILRCEVADGAGSPGDLLDDRLTIACGEGAIRVLELQRAGKPPMKARAFLN 299
Query: 300 GCPVI 304
G P+
Sbjct: 300 GTPLT 304
>gi|270264341|ref|ZP_06192607.1| methionyl-tRNA formyltransferase [Serratia odorifera 4Rx13]
gi|270041477|gb|EFA14575.1| methionyl-tRNA formyltransferase [Serratia odorifera 4Rx13]
Length = 314
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 119/319 (37%), Positives = 177/319 (55%), Gaps = 15/319 (4%)
Query: 1 MT--LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M+ LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K S V A++
Sbjct: 1 MSDTLRIIFAGTPDFAARHLDALLSSGHQIVGVFTQPDRPAG-RGNKLTPSPVKVLAEQH 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP P L EE + ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWR
Sbjct: 60 QLPVFQPKSLRPEENQHLVADLNADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPIQR++ AGDNETG+ IM+MD LDTG + PI ++ +A L +L+ L
Sbjct: 120 GAAPIQRSLWAGDNETGVTIMQMDVGLDTGDMMHKIACPIEADDTSATLYDKLAKLGPQG 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
M+ + ++ + Q E +TYAEK+SK E R+++ SA + IRA +P+P ++
Sbjct: 180 MLTTLLQMAEGTAQREVQDEALVTYAEKLSKEEARLDWSLSAVQLERCIRAFNPWPVSYF 239
Query: 238 EMMIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+ + +K+ ++ ++ +PG +I IA + G + + +LQ AG + +
Sbjct: 240 TIDD----QPVKVWQATVLADTPGAEPGTIIHADKHGIQIATADGILNLTQLQPAGKKPM 295
Query: 293 DIGDFLLGCP--VIIGCIV 309
D L G
Sbjct: 296 SAQDLLNSRREWFTPGNRF 314
>gi|255656563|ref|ZP_05401972.1| methionyl-tRNA formyltransferase [Clostridium difficile QCD-23m63]
gi|296449985|ref|ZP_06891749.1| methionyl-tRNA formyltransferase [Clostridium difficile NAP08]
gi|296878366|ref|ZP_06902374.1| methionyl-tRNA formyltransferase [Clostridium difficile NAP07]
gi|296261255|gb|EFH08086.1| methionyl-tRNA formyltransferase [Clostridium difficile NAP08]
gi|296430664|gb|EFH16503.1| methionyl-tRNA formyltransferase [Clostridium difficile NAP07]
Length = 309
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 96/310 (30%), Positives = 163/310 (52%), Gaps = 3/310 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT + AV LQ ++ + I+ V TQP +P G RG K +S V + A E ++P
Sbjct: 1 MKIVFMGTPDIAVPCLQKIIDEKYEILGVVTQPDKPKG-RGKKLGMSPVKELAIENNIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K +E + S N DV VVVA+G ++P+ IL K G N H SLLP++RGAAP
Sbjct: 60 YQPVKARDKEFIDTIKSLNPDVIVVVAFGQILPKGILEIPKFGCINVHVSLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I I+ G+ +TG+ M MD+ LDTG + +V + NI L ++ + A + E
Sbjct: 120 INWVIINGEEKTGVTTMYMDEGLDTGDMILKTEVNLDENITAGELHDKMMNIGAETLKET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ N P Q +YA ++K ++F +SA +HN +R ++P+P A+
Sbjct: 180 LRLIEEGNAPREVQNHEEFSYAPIMNKSLGNIDFSKSAREIHNLVRGVNPWPSAYTTYND 239
Query: 242 GNKH-ERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ K+L+ + + G +V ++ + I +Q + + +G+++ G
Sbjct: 240 VIMKVWKTKVLDEKSTKDAGTIIDVSKDGIKVSTIDNVLLIEEIQMPNKKRMLVGEYIKG 299
Query: 301 CPVIIGCIVG 310
+ G ++G
Sbjct: 300 NTIETGLVLG 309
>gi|268318094|ref|YP_003291813.1| methionyl-tRNA formyltransferase [Rhodothermus marinus DSM 4252]
gi|262335628|gb|ACY49425.1| methionyl-tRNA formyltransferase [Rhodothermus marinus DSM 4252]
Length = 320
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 120/311 (38%), Positives = 170/311 (54%), Gaps = 8/311 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL- 60
LR+VFMGT EFAV +L+ LV + + V+V T P RP G RG + + V + A L
Sbjct: 14 PLRIVFMGTPEFAVPSLERLVEAGYRPVAVVTGPDRPRG-RGQRVQPTPVKEAALRLGLS 72
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L P + + + ++ +VV ++P + +LG +N HASLLPR+RGAA
Sbjct: 73 PILQPESVRDPAFAEAIAELRPDVIVVVAFKILPPEVYTQARLGAFNLHASLLPRYRGAA 132
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI RAIMAG+ ETG+ + +DTG + ++ PI L L L A A++E
Sbjct: 133 PIHRAIMAGETETGVTTFFLRPEVDTGEIILQKRTPIGPEETAGELHDRLMHLGAEAVLE 192
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +E+ PQ + T A K+++ E RV + R A+ VHNHIR LSP PGAW
Sbjct: 193 TVRLIERGEAHPRPQDDTQATLAPKLTREEARVPWDRPAQVVHNHIRGLSPHPGAWT--- 249
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ +KL S+L EGEG PG V+ + +AC +GAV I+ LQ+ G RVL FL
Sbjct: 250 -MHGDRLLKLYRSRLAEGEGPPGTVLEADDRLVVACGEGAVEILELQQEGRRVLPADAFL 308
Query: 299 LGCPVIIGCIV 309
G P+ G +
Sbjct: 309 RGYPLRPGDRL 319
>gi|297182650|gb|ADI18808.1| methionyl-tRNA formyltransferase [uncultured SAR11 cluster
bacterium HF4000_37C10]
Length = 306
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 131/310 (42%), Positives = 196/310 (63%), Gaps = 6/310 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+L++VFMGT EF+V L+AL++S I+S+YTQPP+ + +RG K +S+V K +++ +L
Sbjct: 1 MSLKIVFMGTPEFSVPALEALINSKFEILSIYTQPPKKS-KRGQKINVSSVQKFSEKNNL 59
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P L E F+ +AD+AVVVAYG +IP+ IL TKLGF N HASLLP+WRGA
Sbjct: 60 PVRNPENLNNNEEYNFIKSLSADIAVVVAYGKLIPKNILKTTKLGFINIHASLLPKWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIM D +TG++IMK+++ LD+GPV +++ + +Q +LS++ + ++
Sbjct: 120 APIQRAIMNEDKKTGVSIMKIEEKLDSGPVLASKELALDQRAIYGEIQTKLSLIGSDLLI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E++ +E Q+ + TYA+KI K ET++N+ A V HI LSP PGAW E
Sbjct: 180 ESLKNIENGKAKFIDQVHSDSTYAKKIDKNETKINWSLDANKVIAHIHGLSPNPGAWFE- 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
++ ER K+L + G PG +++ N TIAC +++I+ +QR G DFLL
Sbjct: 239 ---HETERFKVLRANKSAASGNPGTLLDENLTIACKSDSIQILEIQRQGKNKQTTKDFLL 295
Query: 300 GCPVIIGCIV 309
G + G I+
Sbjct: 296 GKKISKGSIL 305
>gi|170682749|ref|YP_001745550.1| methionyl-tRNA formyltransferase [Escherichia coli SMS-3-5]
gi|226704299|sp|B1LGP4|FMT_ECOSM RecName: Full=Methionyl-tRNA formyltransferase
gi|170520467|gb|ACB18645.1| methionyl-tRNA formyltransferase [Escherichia coli SMS-3-5]
Length = 315
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 180/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSSPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ + PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTVTKSAPGTILEASKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|330447315|ref|ZP_08310965.1| methionyl-tRNA formyltransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491506|dbj|GAA05462.1| methionyl-tRNA formyltransferase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 314
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 111/315 (35%), Positives = 172/315 (54%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT +FA L AL+SS H +V+VYTQP RPAG RG K S V A E +P
Sbjct: 4 PLRIVFAGTPDFAARHLAALLSSQHDVVAVYTQPDRPAG-RGKKLTASPVKAIALENDIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E ++ + +AD+ VVVAYGL++P +L+ +LG N H S+LPRWRGAA
Sbjct: 63 VYQPVSLRNEEAQQELAAIDADIMVVVAYGLLLPLEVLDTPRLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI + +A + ++L+ L A+++
Sbjct: 123 PIQRSIWAGDTETGVTIMQMDIGLDTGDMLKVATLPIEATDTSATMYEKLAELGPDALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K+SK E +++ A + +RA +P+P ++ +
Sbjct: 183 CLSDIADGTAVAVKQDDEQANYAKKLSKEEALIDWTMDAAAIERCVRAFNPWPMSYFTVA 242
Query: 241 IGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
N +E+ + +GK PG ++ +A GA+R++ LQ G + + D
Sbjct: 243 EQNVKVWQTAVEA---DNQGKAPGTILSADKQGILVATGNGALRLISLQPPGKKAMSAAD 299
Query: 297 FLLGCP--VIIGCIV 309
L G +
Sbjct: 300 LLNSRREWFEPGTQL 314
>gi|253682057|ref|ZP_04862854.1| methionyl-tRNA formyltransferase [Clostridium botulinum D str.
1873]
gi|253561769|gb|EES91221.1| methionyl-tRNA formyltransferase [Clostridium botulinum D str.
1873]
Length = 309
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 96/314 (30%), Positives = 170/314 (54%), Gaps = 13/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT EFAV +L+A++ + + +V+TQP RP G RG K +S V + A + ++
Sbjct: 1 MKIIFMGTPEFAVPSLEAIIDN-FGVEAVFTQPDRPKG-RGKKVAMSPVKEVALKNNIEV 58
Query: 63 LVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
PTK + E+ D +VVAYG ++ + +L K N HASLLP++RGAA
Sbjct: 59 CQPTKLKNEPKFIEKLKKIQPDFIIVVAYGQILSKEVLEIPKYACINLHASLLPKYRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ AI+ G+ ++G M MD LDTG + ++V I+ ++ L L +VE
Sbjct: 119 PLNWAIINGEKKSGNTTMLMDVGLDTGDMLMSQEVEINEDMTAGELHDILMYQGGKLLVE 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++K+ + + Q E+ YA + K +++ SA+++HN IR L+P+P A+
Sbjct: 179 TINKMVKGEINPQKQDESSTCYASMLDKKIACIDWKNSAKDIHNLIRGLNPWPVAYTYY- 237
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ +SQ++ + +PG +I IAC G + + +Q G + L +
Sbjct: 238 ---NDKAMKIYKSQVLNEKSSKEPGTIIEVSKNGLKIACGDGILLVKEIQFPGKKSLKVE 294
Query: 296 DFLLGCPVIIGCIV 309
+++ G + +G I+
Sbjct: 295 EYIRGNSIEVGSIL 308
>gi|84500577|ref|ZP_00998826.1| methionyl-tRNA formyltransferase [Oceanicola batsensis HTCC2597]
gi|84391530|gb|EAQ03862.1| methionyl-tRNA formyltransferase [Oceanicola batsensis HTCC2597]
Length = 301
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 154/308 (50%), Positives = 193/308 (62%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT EF+V L+ALV++ H IV VY QPPRPAG RG + + VH +A E L
Sbjct: 1 MRVIFMGTPEFSVPVLEALVAAGHEIVRVYCQPPRPAG-RGKRDRPTPVHARALEMGLDV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G E F + ADVAVVVAYGL++PQ IL+A + G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKGAEAQADFAALEADVAVVVAYGLILPQAILDAPRHGCVNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD ETG+ IM+M+ LDTGPV +PI T L LS L A +V A
Sbjct: 120 IHRAIMAGDAETGVCIMQMEAGLDTGPVLLREALPIGPEETTGELHDRLSALGARLIVTA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D+L+ PQ E G+TYA+KI K E R+++ R A IR LSPFPGAW E+
Sbjct: 180 LDRLDNL--TPQPQPEEGVTYADKIDKAEARIDWTRPATETDRQIRGLSPFPGAWSELEG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+K+L S+ G G PGEV++ T+AC +GAV+++RLQRAG D +FL G
Sbjct: 238 ----ERLKILRSRPGRGSGDPGEVLDDELTVACGEGAVQLLRLQRAGKGAQDAQEFLRGR 293
Query: 302 PVIIGCIV 309
PV G
Sbjct: 294 PVARGARF 301
>gi|218550563|ref|YP_002384354.1| methionyl-tRNA formyltransferase [Escherichia fergusonii ATCC
35469]
gi|226704300|sp|B7LRQ4|FMT_ESCF3 RecName: Full=Methionyl-tRNA formyltransferase
gi|218358104|emb|CAQ90751.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia fergusonii ATCC 35469]
gi|324111966|gb|EGC05945.1| methionyl-tRNA formyltransferase [Escherichia fergusonii B253]
Length = 315
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGGGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|319780349|ref|YP_004139825.1| methionyl-tRNA formyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166237|gb|ADV09775.1| methionyl-tRNA formyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 317
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 156/316 (49%), Positives = 207/316 (65%), Gaps = 7/316 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LRV+FMGT EF+V TL+A+ + H I +VYTQPPR AGRRGL+ S V ++A+ +
Sbjct: 1 MPLRVIFMGTPEFSVPTLRAIAEAGHEISAVYTQPPRAAGRRGLELTPSPVQREAERLGI 60
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P G+ E F + ADVAVVVAYGL++P+ +L AT+LG NGHASLLPRWRGA
Sbjct: 61 EVRTPVSLKGEAEQAAFRALQADVAVVVAYGLLLPKAVLEATRLGCVNGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD E+G+ +M+M++ LDTGPV + K I ++ L L + A MV
Sbjct: 121 APIQRAIMAGDLESGMMVMRMEEGLDTGPVGLVEKCAIEPDMTAGDLHDRLMSVGAALMV 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EA+ +LE N L + Q +G+TYA+KI K ETRV++ RSA VHNHIR LSPFPGAW E+
Sbjct: 181 EALARLEGNTLTFTTQAVDGVTYAKKIDKSETRVDWTRSASEVHNHIRGLSPFPGAWSEI 240
Query: 240 MIGNKHERIKLLES------QLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLD 293
IG + ER+KLL S E G+ G +++ T+AC GA+R++ +QRAGG+
Sbjct: 241 GIGGRQERLKLLRSTLSQGLSPSEDLGESGGILDDRLTVACGAGAIRLVEVQRAGGKPAA 300
Query: 294 IGDFLLGCPVIIGCIV 309
+FL G + G
Sbjct: 301 ASEFLRGAKIEKGLKF 316
>gi|148827777|ref|YP_001292530.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittGG]
gi|166214900|sp|A5UH91|FMT_HAEIG RecName: Full=Methionyl-tRNA formyltransferase
gi|148719019|gb|ABR00147.1| hypothetical protein CGSHiGG_06230 [Haemophilus influenzae PittGG]
Length = 318
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 114/318 (35%), Positives = 184/318 (57%), Gaps = 10/318 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQA+++S H++++VYTQP +PAG RG K S V + A++ +
Sbjct: 1 MKSLNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEQNN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P L +EE + L DV VVVAYGL++P+ +L+A +LG N H S+LPRWRG
Sbjct: 60 IPVYQPKSLRKEEAQSELKALNADVMVVVAYGLILPKAVLDAPRLGCLNVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQR+I AGD +TG+ IM+MD+ LDTG + I + L +L+ L A+
Sbjct: 120 AAPIQRSIWAGDVQTGVTIMQMDESLDTGDMLHKVYCDILPTETSTSLYNKLAELATSAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ +D LE + Q + YAEK+SK E ++++ A + +IRA +P+P A+
Sbjct: 180 IDVLDNLENSKFIAEKQDGSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIAYFS 239
Query: 239 MMIGN-KHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + +K+ +++++ + KP G ++ IA G + +++LQ AG + +
Sbjct: 240 TEDKDGNAQTLKVYQAEVLPHQDKPAGTILSADKNGIQIATVDGVLNLLQLQPAGKKPMS 299
Query: 294 IGDFLLGCP--VIIGCIV 309
D L G IG ++
Sbjct: 300 AQDLLNGRAEWFTIGKVL 317
>gi|225850139|ref|YP_002730373.1| methionyl-tRNA formyltransferase [Persephonella marina EX-H1]
gi|254789363|sp|C0QUK8|FMT_PERMH RecName: Full=Methionyl-tRNA formyltransferase
gi|225645538|gb|ACO03724.1| methionyl-tRNA formyltransferase [Persephonella marina EX-H1]
Length = 311
Score = 197 bits (501), Expect = 2e-48, Method: Composition-based stats.
Identities = 110/315 (34%), Positives = 176/315 (55%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVF GT +FAV +L+AL+ S H +V+V TQP +P G RG K V A+++S+P
Sbjct: 1 MRVVFWGTPDFAVESLKALIESKHQVVAVVTQPDKPKG-RGKKVQPPPVKVLAEKYSIPV 59
Query: 63 LVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ + Y++ D+ VVVAYG ++P+ I+N K N HASLLP +RGAA
Sbjct: 60 FQPEKVKGNKELYQKLKELEPDIFVVVAYGKILPEEIINLPKYKTVNVHASLLPEYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI RAIM G +TG+ IM++ K LD G + ++PI+ + L +L+ A +++
Sbjct: 120 PIHRAIMEGKEKTGVCIMEIVKELDAGDIYQCVEIPITDQDDIVSLHDKLAKEGAKLLLD 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+DK+E+ + PQ TYA+ I K E R+++ RSA + N +RAL +P A+
Sbjct: 180 TLDKIEKGEIKKVPQDHERATYAKPIEKEEGRIDWKRSAREIFNQVRALKVWPKAFSNFR 239
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDI 294
IK+LE ++++ EG+PGE++ F + +G + I ++Q + +
Sbjct: 240 DTQ----IKILECEIIDERSEGEPGEIVKIMKDEGFVVQTGKGKLLIKKVQFPNSKPISA 295
Query: 295 GDFLLGCPVIIGCIV 309
D + G + G +
Sbjct: 296 ADAVRGYRIKEGEKL 310
>gi|323966249|gb|EGB61684.1| methionyl-tRNA formyltransferase [Escherichia coli M863]
gi|327250936|gb|EGE62629.1| methionyl-tRNA formyltransferase [Escherichia coli STEC_7v]
Length = 315
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + +RA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCVRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGGGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|269103776|ref|ZP_06156473.1| methionyl-tRNA formyltransferase [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163674|gb|EEZ42170.1| methionyl-tRNA formyltransferase [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 314
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 184/316 (58%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E +P
Sbjct: 4 PLRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKHIALEHDIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E ++ + NAD+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPASLRNEEAQQELAALNADLMVVVAYGLLLPKEVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ IM+MD+ LDTG + + +PI +N +A + ++L+ L A+V+
Sbjct: 123 PIQRSIWAGDSETGVTIMQMDEGLDTGDMLQIATLPIEANDTSATMYEKLAELGPVALVD 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + Q + YA+K+SK E ++++ A + +RA +P+P ++ E+
Sbjct: 183 CLADIATGKAVATKQDDEQANYAKKLSKEEAKIDWTMDAVAIERCVRAFNPWPMSYFEVS 242
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
N IK+ S++V + +PG ++ +A GA+R++ LQ G + + +
Sbjct: 243 EQN----IKVWRSEVVAEDHGKQPGTILSADKHGIVVATGHGALRLLELQPPGKKAMQVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G ++
Sbjct: 299 DLLNSRREWFEVGSVL 314
>gi|302186427|ref|ZP_07263100.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. syringae
642]
Length = 314
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 122/315 (38%), Positives = 180/315 (57%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S H IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSPHQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHDVP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VMQPPTLRDPAAQAELAALQPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PI++ L L+ L A+++
Sbjct: 123 PIQRAVQAGDAESGVTVMRMEAGLDTGPMLLKAVTPITAQDTGGTLHDRLAELGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L +L Q ++ YA K++K E R+++ R A+ + +RA +P+P +
Sbjct: 183 AIAGLADGSLVGEVQDDSLANYAHKLNKDEARLDWTRPADELERLVRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PG ++ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 242 ---NQETLKVLAADLAEGQGAPGTILGASKDGLIVACGQNALRLTRLQLPGGKPLNFTDL 298
Query: 298 LLGCP--VIIGCIVG 310
IG ++G
Sbjct: 299 FNSRREKFAIGTVLG 313
>gi|218706895|ref|YP_002414414.1| methionyl-tRNA formyltransferase [Escherichia coli UMN026]
gi|293406885|ref|ZP_06650809.1| methionyl-tRNA formyltransferase [Escherichia coli FVEC1412]
gi|298382626|ref|ZP_06992221.1| methionyl-tRNA formyltransferase [Escherichia coli FVEC1302]
gi|331664900|ref|ZP_08365801.1| methionyl-tRNA formyltransferase [Escherichia coli TA143]
gi|226704298|sp|B7NDQ9|FMT_ECOLU RecName: Full=Methionyl-tRNA formyltransferase
gi|218433992|emb|CAR14909.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli UMN026]
gi|291425696|gb|EFE98730.1| methionyl-tRNA formyltransferase [Escherichia coli FVEC1412]
gi|298276462|gb|EFI17980.1| methionyl-tRNA formyltransferase [Escherichia coli FVEC1302]
gi|331057410|gb|EGI29396.1| methionyl-tRNA formyltransferase [Escherichia coli TA143]
Length = 315
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 180/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E +LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKALP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|298484626|ref|ZP_07002730.1| Methionyl-tRNA formyltransferase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298160850|gb|EFI01867.1| Methionyl-tRNA formyltransferase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 314
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 125/315 (39%), Positives = 183/315 (58%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S + IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSPYQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P L + + L+ D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VMQPPTLRAPDAQAELAALKPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PI++ L L+ L A+++
Sbjct: 123 PIQRAVQAGDAESGVTVMQMEAGLDTGPMLLKAVTPITAQDTGGTLHDRLAELGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L +L Q ++ YA K++K E R+++ R A+ + IRA +P+P +
Sbjct: 183 AIAGLADGSLVGEVQDDSLANYAHKLNKDEARLDWTRPADELERLIRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PG V+ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 242 ---NEETLKVLAADLAEGQGVPGTVLSASKDGLIVACGQNALRLTRLQLPGGKPLNFADL 298
Query: 298 LLGCP--VIIGCIVG 310
IG ++G
Sbjct: 299 FNSRREKFAIGTVLG 313
>gi|66043289|ref|YP_233130.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. syringae
B728a]
gi|75504062|sp|Q500T0|FMT_PSEU2 RecName: Full=Methionyl-tRNA formyltransferase
gi|63253996|gb|AAY35092.1| Methionyl-tRNA formyltransferase [Pseudomonas syringae pv. syringae
B728a]
Length = 314
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 122/315 (38%), Positives = 179/315 (56%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S H IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSPHQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHDVP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VMQPPTLRDPAAQAELAALQPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PI++ L L+ L A+++
Sbjct: 123 PIQRAVQAGDAESGVTVMRMEAGLDTGPMLLKAVTPITAQDTGGTLHDRLAELGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L L Q ++ YA K++K E R+++ R A+ + +RA +P+P +
Sbjct: 183 AIAGLADGTLVGEVQDDSLANYAHKLNKDEARLDWTRPADELERLVRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PG ++ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 242 ---NEETLKVLAADLAEGQGAPGTILGASKDGLIVACGQNALRLTRLQLPGGKPLNFTDL 298
Query: 298 LLGCP--VIIGCIVG 310
IG ++G
Sbjct: 299 FNSRREKFAIGTVLG 313
>gi|146305095|ref|YP_001185560.1| methionyl-tRNA formyltransferase [Pseudomonas mendocina ymp]
gi|166215500|sp|A4XNB2|FMT_PSEMY RecName: Full=Methionyl-tRNA formyltransferase
gi|145573296|gb|ABP82828.1| methionyl-tRNA formyltransferase [Pseudomonas mendocina ymp]
Length = 314
Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats.
Identities = 124/315 (39%), Positives = 178/315 (56%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT EFA L+AL++S H +++VYTQP RPAG RG K + S V + A E +P
Sbjct: 4 SLRIVFAGTPEFAAEHLKALLASQHEVIAVYTQPDRPAG-RGQKLMPSPVKQLAVEHGIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VHQPASLRNEEAQAELAALKPDLMVVVAYGLILPQVVLDTPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PIS+ L L+ L A+++
Sbjct: 123 PIQRAVQAGDLESGVTVMQMEAGLDTGPMLLKVSTPISAEDTGGSLHDRLARLGPQAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+D L L Q + YA K++K E R++F R A + IRA P+P +
Sbjct: 183 AIDGLAAGTLIGELQDDAQANYAHKLNKDEARLDFSRPAVELERLIRAFHPWPICHTTLN 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+K+ ++L EG G PG ++ T+AC +GA+R+ RLQ GG+ L D
Sbjct: 243 GDA----LKVHAAELGEGSGAPGTILAADKNGLTVACGEGALRLTRLQLPGGKPLAFSDL 298
Query: 298 LLGCP--VIIGCIVG 310
G ++G
Sbjct: 299 YNSRREQFAPGLVLG 313
>gi|257465714|ref|ZP_05630085.1| methionyl-tRNA formyltransferase [Actinobacillus minor 202]
gi|257451374|gb|EEV25417.1| methionyl-tRNA formyltransferase [Actinobacillus minor 202]
Length = 316
Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 121/315 (38%), Positives = 182/315 (57%), Gaps = 8/315 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL++S H++++VYTQP +PAG RG K S V + A+ +P
Sbjct: 3 KLNIIFAGTPDFAAQHLQALLNSEHNVIAVYTQPDKPAG-RGKKLQASPVKQLAETHQIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +EE + L DV VVVAYGL++P+ +LNA K G N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKEEAQAELKALNADVMVVVAYGLILPEAVLNAPKYGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + I +A L +L+ L A++E
Sbjct: 122 PIQRSIWAGDQETGVTIMQMDVGLDTGDMLHKVTTAIDPQETSASLYAKLAELAPPALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D L + Q E YAEK++K E ++++ +A + +IR+ +P P A+L +
Sbjct: 182 VLDGLSEQRFKPEKQEEALANYAEKLTKEEAKLDWNLTACQLERNIRSFNPAPIAYLTLP 241
Query: 241 IGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ERIK+ +++++ + K G V+ IA +G + I +LQ G + + + D
Sbjct: 242 VNGVEERIKVYQAEVLPHQAKEAGTVLAVEKKGIQIATHEGVLNITQLQPQGKKPMSVQD 301
Query: 297 FLLGCP--VIIGCIV 309
FL G ++G +
Sbjct: 302 FLNGRADWFVVGEKL 316
>gi|154497981|ref|ZP_02036359.1| hypothetical protein BACCAP_01961 [Bacteroides capillosus ATCC
29799]
gi|150272971|gb|EDN00128.1| hypothetical protein BACCAP_01961 [Bacteroides capillosus ATCC
29799]
Length = 311
Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 95/308 (30%), Positives = 161/308 (52%), Gaps = 6/308 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT EFAV +L+ALV++ H + V++QP +P GR K + + + A ++P
Sbjct: 1 MRILFMGTPEFAVPSLEALVAAGHEVCGVFSQPDKPVGRHQNKLQPTPIKECALAHNIPV 60
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ Q + ++ VV AYG ++P IL G N H+SLLP++RGAAP
Sbjct: 61 FQPVKMRDGTALAQIQALVPELIVVAAYGRILPDDILACPPKGCINVHSSLLPKYRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ GD +G+ IM M LD G + I + L + LS+L A +V+A
Sbjct: 121 INWAVINGDTVSGVTIMHMATELDAGDIIAQESTEIGPDETAEELYRRLSILGADLLVQA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E +PQ T A + K + +++ R+A +H +R L P+P A + +
Sbjct: 181 VSAIEAGLAQRTPQNGEEATLAPMLGKELSPMDWSRTAHALHCQVRGLLPWPVASTD-KL 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
++ ++ E + + +PG V+ +AC +G+ +RI LQ G + + D+
Sbjct: 240 TGENIKVYRTEETGDKTQAQPGTVLAAGKQGIDVACGEGSVLRITELQAPGKKRMKAADY 299
Query: 298 LLGCPVII 305
L G P+ +
Sbjct: 300 LRGHPIAV 307
>gi|260427666|ref|ZP_05781645.1| methionyl-tRNA formyltransferase [Citreicella sp. SE45]
gi|260422158|gb|EEX15409.1| methionyl-tRNA formyltransferase [Citreicella sp. SE45]
Length = 308
Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 145/309 (46%), Positives = 196/309 (63%), Gaps = 8/309 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT +F+V L+ALV++ H I +VY QPPRPAG RG K + VH +A+ L
Sbjct: 1 MRVIFMGTPDFSVPVLEALVAAGHEIAAVYCQPPRPAG-RGKKDRPTPVHARAEALGLEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + EE E+F + ADVAVVVAYGL++PQ +L+A K G N HASLLPRWRGAAP
Sbjct: 60 RHPERLRSAEEQERFAALGADVAVVVAYGLILPQPVLDAPKHGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAI++GD ETG+ IM+M+ LDTGPV I + T L LS + A + EA
Sbjct: 120 IHRAILSGDAETGVCIMQMEAGLDTGPVLLREATEIGAEETTGELHDRLSAMGARLITEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D+L+ + Q E+G+TYA+KI K E V++ R A + IR L+PFPGAW +
Sbjct: 180 LDRLDGLAPEV--QPEDGVTYAQKIDKAEAAVDWSRPATEISRQIRGLAPFPGAWTTLGG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ERIKLL +++V G+G PG ++ FTIAC +GAV++ R QRAG + FL G
Sbjct: 238 ----ERIKLLGARVVAGQGAPGTALDDGFTIACGEGAVQVTRAQRAGKGAQEAETFLRGM 293
Query: 302 PVIIGCIVG 310
+ G ++G
Sbjct: 294 AIPRGTVLG 302
>gi|330976421|gb|EGH76477.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 314
Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 122/315 (38%), Positives = 180/315 (57%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S H IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSPHQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHDVP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VMQPPTLRDPAAQAELAALQPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PI++ L L+ L A+++
Sbjct: 123 PIQRAVQAGDAESGVTVMRMEAGLDTGPMLLKAVTPITAQDTGGTLHDRLAELGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L +L Q ++ YA K++K E R+++ R A+ + +RA +P+P +
Sbjct: 183 AIAGLADGSLVGEVQDDSLANYAHKLNKDEARLDWTRPADELERLVRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PG ++ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 242 ---NEETLKVLAADLAEGQGAPGTILGASKDGLIVACGQNALRLTRLQLPGGKPLNFTDL 298
Query: 298 LLGCP--VIIGCIVG 310
IG ++G
Sbjct: 299 FNSRREKFAIGTVLG 313
>gi|260461122|ref|ZP_05809371.1| methionyl-tRNA formyltransferase [Mesorhizobium opportunistum
WSM2075]
gi|259033156|gb|EEW34418.1| methionyl-tRNA formyltransferase [Mesorhizobium opportunistum
WSM2075]
Length = 317
Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 155/316 (49%), Positives = 206/316 (65%), Gaps = 7/316 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LRV+FMGT EF+V TL+AL + H I +VYTQPPR AGRRGL+ S V ++A+ +
Sbjct: 1 MPLRVIFMGTPEFSVPTLRALAEAGHQIAAVYTQPPRAAGRRGLELTPSPVQREAERLGV 60
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P G+ E + AD+AVVVAYGL++P+ +L+A +LG NGHASLLPRWRGA
Sbjct: 61 EVRMPVSLKGEAEQAALHALGADIAVVVAYGLLLPKAVLDAPRLGCINGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD ETG+ +M+M++ LDTGPV + K I ++ L L + A MV
Sbjct: 121 APIQRAIMAGDLETGMMVMRMEEGLDTGPVGLVEKCAIEPDMTAGDLHDRLMSIGAALMV 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EA+ +LE++ L + Q +G+TYA KI K ET V++ R A VHN IR LSPFPGAW E+
Sbjct: 181 EALARLEESTLRFTTQAVDGVTYARKIDKSETHVDWTRPAAEVHNTIRGLSPFPGAWSEI 240
Query: 240 MIGNKHERIKLLESQLVEG------EGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLD 293
IG + ER+KLL S L EG G+ G +++ T+AC GAVR++ +QRAGGR
Sbjct: 241 DIGGRPERLKLLRSTLSEGLPLSDDLGESGGILDDRLTVACGTGAVRLVEVQRAGGRPAA 300
Query: 294 IGDFLLGCPVIIGCIV 309
+FL G + G
Sbjct: 301 APEFLRGAKIEKGMKF 316
>gi|223937553|ref|ZP_03629456.1| methionyl-tRNA formyltransferase [bacterium Ellin514]
gi|223893716|gb|EEF60174.1| methionyl-tRNA formyltransferase [bacterium Ellin514]
Length = 316
Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 117/314 (37%), Positives = 178/314 (56%), Gaps = 7/314 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++FMGT+E A A+L+AL S+V+V TQP RP G R LK S V + A + +LP
Sbjct: 4 LRIIFMGTAELACASLEALTQQTDFSVVAVVTQPDRPKG-RDLKLQPSPVKQVALKHALP 62
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + E+ Q F D+ VV AYG ++P+ IL + G N H SLLP++RGAA
Sbjct: 63 VLQPERARNPEFVQSLAEFKPDLIVVAAYGQILPKSILELPRFGCLNVHTSLLPKYRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI+ G+ TG+ IMKMD LDTG + PI N+ L L+ + A +V
Sbjct: 123 PIQWAILDGEPVTGVTIMKMDAGLDTGDILTQETTPIQHEDNSQLLHDRLAQIGAALLVP 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + PQ G++YA KI K + ++++ + A + N +R +P+PGA+ +
Sbjct: 183 TIREFVSGKIIARPQPVEGVSYARKILKEDGKLDWTQPAHVLWNRVRGFTPWPGAFTHLP 242
Query: 241 IGNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
K +K+ +++++EG G PGE++ IAC + A+++ LQR GGR ++ D
Sbjct: 243 AEPKPLLLKIWQAEVIEGASGNPGEILSADKTGIIIACGEKALKVTTLQREGGRRMNAQD 302
Query: 297 FLLGCPVIIGCIVG 310
FL G + G +G
Sbjct: 303 FLTGHSLKPGQKLG 316
>gi|83859281|ref|ZP_00952802.1| methionyl-tRNA formyltransferase [Oceanicaulis alexandrii HTCC2633]
gi|83852728|gb|EAP90581.1| methionyl-tRNA formyltransferase [Oceanicaulis alexandrii HTCC2633]
Length = 309
Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 144/310 (46%), Positives = 192/310 (61%), Gaps = 3/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MTLR+ FMGT +FA A+L +V + H +V+VYTQP RP G RG V + VH+ A++F L
Sbjct: 1 MTLRLAFMGTPDFAAASLAEIVGAGHEVVAVYTQPERPRG-RGQTLVKTPVHQLAEQFGL 59
Query: 61 PALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + D A VVAYG ++PQ+ L+A +LG N HASLLPRWRGA
Sbjct: 60 TVHTPESFRDPDVIAQFESLDLDAACVVAYGQILPQQALDAPRLGCLNLHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD TG+ IM+M+ LDTGPV VPIS A L L A
Sbjct: 120 APIQRAIMAGDEMTGVQIMQMEAGLDTGPVLMSEVVPISETDTAASLHDRLMSTGALLWP 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ LE+ +L +PQ E G+TYA+KI++ E R+N+ + A V +HIR LSPFPGA+ E+
Sbjct: 180 RTLAALERGSLNAAPQSEEGVTYAKKITREEARINWSKPASEVADHIRGLSPFPGAYFEL 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+K R+K+ +Q GEG+PGE ++ + IAC +GAVR++RLQR G V+D FL
Sbjct: 240 PG-DKPVRVKVHFAQPEAGEGEPGEALDDSLLIACGRGAVRLVRLQREGKGVMDAKAFLN 298
Query: 300 GCPVIIGCIV 309
G V G ++
Sbjct: 299 GVDVPKGTVL 308
>gi|312116196|ref|YP_004013792.1| methionyl-tRNA formyltransferase [Rhodomicrobium vannielii ATCC
17100]
gi|311221325|gb|ADP72693.1| methionyl-tRNA formyltransferase [Rhodomicrobium vannielii ATCC
17100]
Length = 310
Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 153/310 (49%), Positives = 208/310 (67%), Gaps = 2/310 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LRVVFMGT +F+V TL +V++ H +V VYTQPPRPAG RG++ S VH A+E L
Sbjct: 1 MVLRVVFMGTPDFSVPTLSEIVAAGHDVVGVYTQPPRPAG-RGMEPKKSPVHAFAEEAGL 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E +F + ADVAVVVAYGL++P+ +L A LG N HASLLPRWRGA
Sbjct: 60 HVFTPKSLKKAEAQAEFAALGADVAVVVAYGLILPKPVLAAPPLGCLNLHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI+AGD ETG+ +MKM++ LDTGP+A ++ I ++ + LS++ A M+
Sbjct: 120 APIQRAIIAGDAETGVMVMKMEEGLDTGPIALADRISIGADATAGEIHDHLSLMGAPLML 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
A+D+L + L +PQ E G+TYA KISK ETR+++ R VH+ IR LSP+PGAW E
Sbjct: 180 NALDRLPRGELAFTPQPEEGVTYAAKISKDETRIDWSRPGPEVHDKIRGLSPYPGAWFEA 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
++G K ER+K+L S LV G+G PG++++ + T+AC AVR+ R+QRAG R + +FL
Sbjct: 240 LLGGKCERVKVLRSVLVPGKGDPGQLLDGHLTVACGSQAVRLTRVQRAGKRAVGGDEFLR 299
Query: 300 GCPVIIGCIV 309
G P+ G
Sbjct: 300 GFPLGRGTQF 309
>gi|300718673|ref|YP_003743476.1| 10-formyltetrahydrofolate:L-methionyl-tRNA (FMet)
N-formyltransferase [Erwinia billingiae Eb661]
gi|299064509|emb|CAX61629.1| 10-formyltetrahydrofolate:L-methionyl-tRNA (FMet)
N-formyltransferase [Erwinia billingiae Eb661]
Length = 314
Score = 197 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 115/318 (36%), Positives = 178/318 (55%), Gaps = 14/318 (4%)
Query: 1 MT--LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M+ L ++F GT +FA L AL+SS H++V V+TQP RPAG RG K S V + A++
Sbjct: 1 MSEALNIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGNKLTASPVKQLAEQH 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+LP P L EE +Q ++ DV VVVAYGL++P +L +LG N H SLLP+WR
Sbjct: 60 NLPVFQPKSLRPEENQQLVADLRADVMVVVAYGLILPAPVLAMPRLGCINVHGSLLPKWR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPIQR++ AGD+ETG+ IM+MD LDTG + + PI +A L +L+ L
Sbjct: 120 GAAPIQRSLWAGDSETGVTIMQMDVGLDTGDMLYKLACPIGPEDTSATLYSKLAELGPEG 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
M+ + +L Q E ++YAEK+SK E ++++ SA + IRA +P+P ++
Sbjct: 180 MLVTLSQLADGTAKPEVQDEVQVSYAEKLSKEEAKLDWSLSATQLERCIRAFNPWPVSYF 239
Query: 238 EMMIGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + +K+ ++ ++ + PG+++ +A + G + I LQ AG + +
Sbjct: 240 TVDD----QPVKVWKATVLPHSDQHPGKIVQADKNGIQVATADGVLNIEELQPAGKKPMK 295
Query: 294 IGDFLLGCP--VIIGCIV 309
D L G I+
Sbjct: 296 AQDLLNSRREWFTPGNIL 313
>gi|126700203|ref|YP_001089100.1| methionyl-tRNA formyltransferase [Clostridium difficile 630]
gi|123363033|sp|Q182S2|FMT_CLOD6 RecName: Full=Methionyl-tRNA formyltransferase
gi|115251640|emb|CAJ69473.1| Methionyl-tRNA formyltransferase [Clostridium difficile]
Length = 309
Score = 197 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 97/310 (31%), Positives = 166/310 (53%), Gaps = 3/310 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT + AV LQ ++ ++ I+ V TQP +P G RG K +S V + A E ++P
Sbjct: 1 MKIVFMGTPDIAVPCLQKIIDENYEILGVVTQPDKPKG-RGKKLGMSPVKELAIENNIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K +E ++ S N DV VVVA+G ++P+ IL KLG N H SLLP++RGAAP
Sbjct: 60 YQPVKARDKEFIDKIKSLNPDVIVVVAFGQILPKEILEIPKLGCINVHVSLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I I+ G+ +TG+ M MD+ LDTG + +V + NI L ++ + A + E
Sbjct: 120 INWVIINGEEKTGVTTMYMDEGLDTGDMILKTEVNLDENITAGELHDKMMNIGAETLKET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ N P Q +YA ++K ++F +SA +HN +R ++P+P A+
Sbjct: 180 LRLIEEGNAPREVQNHEEFSYAPIMNKSLGNIDFSKSAREIHNLVRGVNPWPSAYTTYND 239
Query: 242 GNKH-ERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ K+L+ + + G +V ++ + I +Q + + +G+++ G
Sbjct: 240 VIMKVWKTKVLDEKSTKDVGTIIDVSKDGIKVSTIDNVLLIEEIQMPNKKRMLVGEYIKG 299
Query: 301 CPVIIGCIVG 310
+ G ++G
Sbjct: 300 NTIETGLVLG 309
>gi|225018697|ref|ZP_03707889.1| hypothetical protein CLOSTMETH_02647 [Clostridium methylpentosum
DSM 5476]
gi|224948425|gb|EEG29634.1| hypothetical protein CLOSTMETH_02647 [Clostridium methylpentosum
DSM 5476]
Length = 313
Score = 197 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 111/315 (35%), Positives = 174/315 (55%), Gaps = 11/315 (3%)
Query: 1 MT--LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M +++VFMGT +FA A+LQ L+ S H I++VYTQP +P G RG K V A E
Sbjct: 1 MKNNMKLVFMGTPDFAAASLQRLIDSGKHEILAVYTQPDKPKG-RGYKLAPPPVKVLALE 59
Query: 58 FSLPALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+P P L +E + +F+ D+ VVAYG ++P +L K G N H SLLP++
Sbjct: 60 HGIPVFQPVSLKEESVLEQLEAFSPDLIAVVAYGRILPSAVLELPKFGCVNLHGSLLPKY 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQ +++ GD G+ M M + LDTG + + I ++ ++ L L+ + A
Sbjct: 120 RGAAPIQWSVLNGDPVAGVTTMYMAEGLDTGDMILKAETEIGADETSSELYDRLAQIGAG 179
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
++E D++E P +PQ + YA +S+ + V+F + A VHN IR LS +P A
Sbjct: 180 LLLETFDQIEAGTAPRTPQDDALSCYAPMLSREMSLVDFSQPASKVHNLIRGLSDWPAAH 239
Query: 237 LEMMIGNKHERIKLLESQLVEG-EGKPGEVIN-PNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +++K+ +S L EG G+PGE+++ F + C GAV ++ +Q G + +
Sbjct: 240 ATIGG----KKLKIFQSTLAEGYRGEPGELLDSKRFVVGCGDGAVELLSVQFEGSKRMSG 295
Query: 295 GDFLLGCPVIIGCIV 309
DFL G + G +
Sbjct: 296 RDFLNGKRIAQGEFL 310
>gi|220928952|ref|YP_002505861.1| methionyl-tRNA formyltransferase [Clostridium cellulolyticum H10]
gi|254789348|sp|B8I255|FMT_CLOCE RecName: Full=Methionyl-tRNA formyltransferase
gi|219999280|gb|ACL75881.1| methionyl-tRNA formyltransferase [Clostridium cellulolyticum H10]
Length = 312
Score = 197 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 96/312 (30%), Positives = 161/312 (51%), Gaps = 5/312 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT EFAV +L+ L++ +++++V TQP +P G RG K V + A E +
Sbjct: 1 MKIIFMGTPEFAVPSLEMLINEGYNVIAVVTQPDKPKG-RGKKLAAPPVKEFALEHGIKV 59
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P E EQ D+ + AYG +I + +L+ LG N H SLLP +RGAAP
Sbjct: 60 LQPAKIKTPEFVEQIRELGPDLLITAAYGKIISKDMLDVPPLGCINVHGSLLPAYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I +I+ G+ TGI M D LDTG + R++ ISS++ L E+++L A + +
Sbjct: 120 IHWSIINGEKVTGITTMFTDVGLDTGDMLLKRELEISSDMTAGELHDEMAILGAEVLKDT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L+ L SPQ + +YA I+K +++ ++ + VHN +R +P+PGA+ +
Sbjct: 180 LIHLKNGTLVRSPQDDALSSYAPIITKEVGLIDWNKTVQQVHNLVRGTNPWPGAFTFINE 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ E PGE++ + + C G + I LQ + + + D++
Sbjct: 240 SKMRVWKTCIVDFGNSQEHCPGEIVSVDDKGILVKCCDGYIMIKELQFDSSKRMKVRDYI 299
Query: 299 LGCPVIIGCIVG 310
G + G +G
Sbjct: 300 RGNKIDTGEKLG 311
>gi|312111727|ref|YP_003990043.1| methionyl-tRNA formyltransferase [Geobacillus sp. Y4.1MC1]
gi|311216828|gb|ADP75432.1| methionyl-tRNA formyltransferase [Geobacillus sp. Y4.1MC1]
Length = 318
Score = 197 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 101/315 (32%), Positives = 164/315 (52%), Gaps = 10/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT +F+V L+ L+ + I +V TQP +P G R + V +A++ +P
Sbjct: 2 INIVFMGTPDFSVPILKRLIEDGYHIAAVVTQPDKPKG-RKRELTPPPVKVEAEKHGIPV 60
Query: 63 LVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L PTK+ ++E + + + D+ V A+G ++P+ +L A K G N HASLLP RG AP
Sbjct: 61 LQPTKIREQEQYEQILALEPDLIVTAAFGQILPKALLEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G +TG+ IM M + LD G + +VPI+ L +LS+ A + E
Sbjct: 121 IHYAILQGKTKTGVTIMYMAEKLDAGDILTQVEVPITETDTVGTLHDKLSIAGAKLLSET 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L L Q E TYA I + + ++++ + E+V+NHIR L+P+P A+
Sbjct: 181 IPQLVAGKLTPVKQEEEKATYAYNIKREQEKIDWTKPGEDVYNHIRGLNPWPVAYTTY-- 238
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACS-QGAVRIMRLQRAGGRVLDIGDF 297
+I E +PG +I+ +A + A++I LQ +G + +D F
Sbjct: 239 YGNIWKIWWGEKVPAPKNAEPGTIIDIAHDGIVVATGNETAIKITELQPSGKKRMDAAQF 298
Query: 298 LL--GCPVIIGCIVG 310
L G + IG +G
Sbjct: 299 LRGAGAHLTIGMKLG 313
>gi|330970342|gb|EGH70408.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 314
Score = 197 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 122/315 (38%), Positives = 181/315 (57%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S H IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSPHQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHDVP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P + + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VMQPPTLRDPDAQAELAALQPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PI++ L L+ L A+++
Sbjct: 123 PIQRAVQAGDAESGVTVMRMEAGLDTGPMLLKAVTPITAQDTGGTLHDRLAELGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L +L Q ++ YA K++K E R+++ R A+ + +RA +P+P +
Sbjct: 183 AIAGLADGSLVGEVQDDSLANYAHKLNKDEARLDWTRPADELERLVRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PG ++ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 242 ---NEETLKVLAADLAEGQGAPGTILGASKDGLIVACGQNALRLTRLQLPGGKPLNFTDL 298
Query: 298 LLGCP--VIIGCIVG 310
IG ++G
Sbjct: 299 FNSRREKFAIGTVLG 313
>gi|239626558|ref|ZP_04669589.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239516704|gb|EEQ56570.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 319
Score = 197 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 102/318 (32%), Positives = 168/318 (52%), Gaps = 14/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M +R+VFMGT +F+V TL+ALV + H + +V TQP +P G RG + ++ V +A E+ +
Sbjct: 1 MDMRIVFMGTPDFSVPTLKALVEAGHDVAAVVTQPDKPKG-RGKEMQMTPVKVQALEYKI 59
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K+ + + + AD VV+A+G ++P+ +L + G N HASLLP++RGA
Sbjct: 60 PVYQPVKVRDQAFIEVLRELEADAFVVIAFGQILPKAVLELPRYGCVNIHASLLPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ ++ G+ ETGI M MD LDTG + +PI L +LS+ ++
Sbjct: 120 APIQWCVIDGEKETGITTMMMDVGLDTGDMLEKVVIPIDEKETGGSLHDKLSLAGGSLIL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ KLE+ +PQ E G YA+ ++K +++ + A ++ IR L+P+P A+
Sbjct: 180 STLRKLEEGTAVRTPQTEEGTCYAKMLTKSLGDIDWNQDAVSIERLIRGLNPWPSAYT-- 237
Query: 240 MIGNKHERIKLLESQLVEGEGKP------GEVINPN--FTIACSQGAVRIMRLQRAGGRV 291
+ IK+ + +++ E G ++ + G + I LQ G +
Sbjct: 238 --MWNGKTIKIWAADVIKDEAPANGLPCGGVALSDRHCLAVRTGDGLLSIKELQMEGKKR 295
Query: 292 LDIGDFLLGCPVIIGCIV 309
+DI FL G P+ G +
Sbjct: 296 MDIEAFLRGYPIPAGDVF 313
>gi|261495145|ref|ZP_05991609.1| methionyl-tRNA formyltransferase [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|261309215|gb|EEY10454.1| methionyl-tRNA formyltransferase [Mannheimia haemolytica serotype
A2 str. OVINE]
Length = 317
Score = 197 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 122/305 (40%), Positives = 177/305 (58%), Gaps = 6/305 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL+ S H++++VYTQP +PAG RG K S V + A+ ++P
Sbjct: 3 KLNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEAHNIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +EE + L DV VVVAYGL++P+ +LNA K G N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKEEAQAELKALNADVMVVVAYGLILPEAVLNAPKYGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM MD LDTG + PI N +A L +L+ L A++E
Sbjct: 122 PIQRSIWAGDTETGVTIMLMDVGLDTGDMLHKVTTPIEPNETSASLYAKLAELAPLALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L + Q E YAEK+SK E ++++ A + +IRA +P+P ++L +
Sbjct: 182 VLNGLANHTFKAEKQDEALSNYAEKLSKEEAKLDWQLPAVQLERNIRAFNPWPFSFLTLT 241
Query: 241 IGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + IK+ ++ ++ + K G VI IA QG + I +LQ A + + + D
Sbjct: 242 VDGVEQSIKIHQATVLPHQEKAAGTVINVDKTGIQIATQQGVLNITQLQPASKKPMSVQD 301
Query: 297 FLLGC 301
FL G
Sbjct: 302 FLNGR 306
>gi|293393279|ref|ZP_06637593.1| methionyl-tRNA formyltransferase [Serratia odorifera DSM 4582]
gi|291424189|gb|EFE97404.1| methionyl-tRNA formyltransferase [Serratia odorifera DSM 4582]
Length = 314
Score = 197 bits (499), Expect = 3e-48, Method: Composition-based stats.
Identities = 118/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H +V V+TQP RPAG RG K S V A++ LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHQVVGVFTQPDRPAG-RGNKLTPSPVKVLAEQHQLP 62
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE +Q ++ ADV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 IFQPKSLRPEENQQLVATLEADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + PI ++ +A L +L+ L ++
Sbjct: 123 PIQRSLWAGDRETGVTIMQMDVGLDTGDMMHKISCPIEASDTSASLYDKLAELGPRGLLT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + Q E +TYAEK+SK E R+++ SA + IRA +P+P ++ +
Sbjct: 183 TLQQLADGTVAREVQNEALVTYAEKLSKEEARLDWQLSAAQLERCIRAFNPWPVSYFTVD 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++Q+ + +PG +I +A + G + + +LQ AG + +
Sbjct: 243 D----QPVKVWQAQVSDESSNAQPGTIIHADKHGIQVATADGVLCLTQLQPAGKKPMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 299 DLLNSRREWFTPGNRL 314
>gi|330937253|gb|EGH41268.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 314
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 122/315 (38%), Positives = 180/315 (57%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S H IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSPHQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHDVP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VMQPPTLRDPAAQAELAALQPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PI++ L L+ L A+++
Sbjct: 123 PIQRAVQAGDAESGVTVMRMEAGLDTGPMLLKAVTPITAQDTGGTLHDRLAELGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L +L Q ++ YA K++K E R+++ R A+ + +RA +P+P +
Sbjct: 183 AIAGLTDGSLVGEVQDDSLANYAHKLNKDEARLDWTRPADELERLVRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PG ++ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 242 ---NEETLKVLAADLAEGQGAPGTILGASKDGLIVACGQNALRLTRLQLPGGKPLNFTDL 298
Query: 298 LLGCP--VIIGCIVG 310
IG ++G
Sbjct: 299 FNSRREKFAIGTVLG 313
>gi|152972196|ref|YP_001337342.1| methionyl-tRNA formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238896784|ref|YP_002921529.1| methionyl-tRNA formyltransferase [Klebsiella pneumoniae NTUH-K2044]
gi|166214903|sp|A6TEU1|FMT_KLEP7 RecName: Full=Methionyl-tRNA formyltransferase
gi|150957045|gb|ABR79075.1| methionyl-tRNA formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238549111|dbj|BAH65462.1| methionyl-tRNA formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 315
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 113/316 (35%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H +V V+TQP RPAG RG K + S V A+ +LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSEHQVVGVFTQPDRPAG-RGKKLMPSPVKVLAEAHNLP 62
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P+ L ++ ++ ++ AD+ VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPSSLRPQDNQRLVADLGADIMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD+ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDSETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGSLYDKLAELGPQGLLA 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E+ + +AEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLAQLANGTARPEVQDESLVCHAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEI- 241
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ + ++ +PG ++ +A G + + LQ AG + +
Sbjct: 242 ---DGQPVKVWRASVIAEAAHAEPGTIVAATKQGIQVATGDGILSLESLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 299 DLLNSRREWFIPGTRL 314
>gi|88860598|ref|ZP_01135235.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pseudoalteromonas tunicata D2]
gi|88817193|gb|EAR27011.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Pseudoalteromonas tunicata D2]
Length = 321
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 114/315 (36%), Positives = 176/315 (55%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT +FA LQAL+ S H IV+VY P RPAG RG K V + A +
Sbjct: 8 ALRIIFAGTPDFAARHLQALIDSEHEIVAVYCPPDRPAG-RGKKLKACEVKELAVAHDIQ 66
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P+ L E +Q L+ D+ VVVAYGL++P+ IL+ K G N H S+LPRWRGAA
Sbjct: 67 VLQPSSLKSTEVQQELAELNADLMVVVAYGLLLPKAILDTPKFGCINVHGSILPRWRGAA 126
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD E+G+ IM+MD LDTG + + PI+ + + L +L+ L AM+
Sbjct: 127 PIQRAIWAGDEESGVTIMQMDVGLDTGDMLSIVTCPIAKDETSTSLYDKLAQLGPQAMIA 186
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + Q + YA+K+SK E +++ +A+ + ++R+ +P+P + E
Sbjct: 187 TVADIANGQAIATKQDDEQANYAKKLSKEEANIDWTMAADQIERNVRSFNPWPICFTEFS 246
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+K+ ++++V +G+ G ++ IA +Q A++I +LQ G + + DF
Sbjct: 247 GH----TVKIWQAEIVNQQGQAGTILQADKNGIIIATAQHALKITQLQPEGKKPMSAQDF 302
Query: 298 LLGCP--VIIGCIVG 310
L G V +G G
Sbjct: 303 LNGRADWVTVGSKAG 317
>gi|138894693|ref|YP_001125146.1| methionyl-tRNA formyltransferase [Geobacillus thermodenitrificans
NG80-2]
gi|166214898|sp|A4IM47|FMT_GEOTN RecName: Full=Methionyl-tRNA formyltransferase
gi|134266206|gb|ABO66401.1| Methionyl-tRNA formyltransferase [Geobacillus thermodenitrificans
NG80-2]
Length = 319
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 106/317 (33%), Positives = 163/317 (51%), Gaps = 11/317 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +VFMGT +FAV L+ L+ + +V+V TQP +P G R + V V +AQ+ +
Sbjct: 1 MT-NIVFMGTPDFAVPVLRQLLDDGYRVVAVVTQPDKPKG-RKRELVPPPVKVEAQKHGI 58
Query: 61 PALVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L PTK+ + E + + +F D+ V A+G ++P+ +L+A K G N HASLLP RG
Sbjct: 59 PVLQPTKIREPEQYEQVLAFAPDLIVTAAFGQILPKALLDAPKYGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI G +TG+ IM M + LD G + +VPI L +LS A +
Sbjct: 119 APIHYAIWQGKTKTGVTIMYMAEKLDAGDMLTQVEVPIEETDTVGTLHDKLSAAGAKLLS 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + L + NL PQ E TYA I + + R+++ + E ++NHIRA P+P +
Sbjct: 179 ETLPLLLEGNLAPIPQEEEKATYAPNIRREQERIDWAQPGEAIYNHIRAFHPWPVTYTTY 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACS-QGAVRIMRLQRAGGRVLDIG 295
+I E PG +++ +A + A++I LQ AG + +
Sbjct: 239 --DGNVWKIWWGEKVPAPSLASPGTILSLEEDGIVVATGSETAIKITELQPAGKKRMAAS 296
Query: 296 DFLLGC--PVIIGCIVG 310
+FL G + +G +G
Sbjct: 297 EFLRGAGSRLAVGTKLG 313
>gi|52426257|ref|YP_089394.1| methionyl-tRNA formyltransferase [Mannheimia succiniciproducens
MBEL55E]
gi|52308309|gb|AAU38809.1| Fmt protein [Mannheimia succiniciproducens MBEL55E]
Length = 318
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 119/315 (37%), Positives = 188/315 (59%), Gaps = 8/315 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+++F GT +FA LQAL++S H +++VYTQP +PAG RG K S V + A+++++P
Sbjct: 4 PLKIIFAGTPDFAAQHLQALLNSHHQVIAVYTQPDKPAG-RGKKLQASPVKQLAEQYNIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E QF ADV VVVAYGL++P+ +L +LG N H S+LPRWRGAA
Sbjct: 63 VYQPKSLRKEEAQAQFAQLQADVMVVVAYGLILPKAVLEMPRLGCLNVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD +TG+ IM+MD+ LDTG + I++ +A L +L+ L A+++
Sbjct: 123 PIQRAIWAGDKQTGVTIMQMDEGLDTGDMLHKVYCDITAEETSASLYHKLATLAPPALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D+LE Q ++ YAEK+SK E ++++ SA + +IRA +P P A+L +
Sbjct: 183 VLDELESGKFIAEKQEDSKSNYAEKLSKEEAKLDWSLSAAQLERNIRAFNPAPVAFLTVP 242
Query: 241 IGNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ERIK+ ++++ G V+ IA ++G + I +LQ +G + + + D
Sbjct: 243 VNEAEERIKVYRAEVLPHQNSAAGTVLAFDKKGLRIATAEGVLNIQQLQPSGKKPMSVQD 302
Query: 297 FLLGCP--VIIGCIV 309
FL G ++G ++
Sbjct: 303 FLNGRADWFVLGQVL 317
>gi|73919404|sp|Q65QF1|FMT_MANSM RecName: Full=Methionyl-tRNA formyltransferase
Length = 317
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 119/315 (37%), Positives = 188/315 (59%), Gaps = 8/315 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+++F GT +FA LQAL++S H +++VYTQP +PAG RG K S V + A+++++P
Sbjct: 3 PLKIIFAGTPDFAAQHLQALLNSHHQVIAVYTQPDKPAG-RGKKLQASPVKQLAEQYNIP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E QF ADV VVVAYGL++P+ +L +LG N H S+LPRWRGAA
Sbjct: 62 VYQPKSLRKEEAQAQFAQLQADVMVVVAYGLILPKAVLEMPRLGCLNVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD +TG+ IM+MD+ LDTG + I++ +A L +L+ L A+++
Sbjct: 122 PIQRAIWAGDKQTGVTIMQMDEGLDTGDMLHKVYCDITAEETSASLYHKLATLAPPALID 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D+LE Q ++ YAEK+SK E ++++ SA + +IRA +P P A+L +
Sbjct: 182 VLDELESGKFIAEKQEDSKSNYAEKLSKEEAKLDWSLSAAQLERNIRAFNPAPVAFLTVP 241
Query: 241 IGNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ERIK+ ++++ G V+ IA ++G + I +LQ +G + + + D
Sbjct: 242 VNEAEERIKVYRAEVLPHQNSAAGTVLAFDKKGLRIATAEGVLNIQQLQPSGKKPMSVQD 301
Query: 297 FLLGCP--VIIGCIV 309
FL G ++G ++
Sbjct: 302 FLNGRADWFVLGQVL 316
>gi|183600720|ref|ZP_02962213.1| hypothetical protein PROSTU_04316 [Providencia stuartii ATCC 25827]
gi|188019700|gb|EDU57740.1| hypothetical protein PROSTU_04316 [Providencia stuartii ATCC 25827]
Length = 315
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 109/316 (34%), Positives = 175/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+L+++F GT +FA L AL+ + H +V V T P +PAG RG K S V AQE +P
Sbjct: 4 SLKIIFAGTPDFAAGHLAALLKTKHQVVGVLTPPDKPAG-RGKKLTPSPVKVLAQEHQIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
PT + ++ NAD+ +VVAYG ++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPTTLKNVDNHQWIKDHNADLMIVVAYGFILPKAVLDIPRLGCLNVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD+ LDTG + + PI +A L ++L+V+ A++
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDEGLDTGDMLYKASCPIMPEDTSATLYEKLAVIGPEALIH 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ + Q ++ YAEK+SK E R+++ +SAE + IRA +P+P ++ +
Sbjct: 183 TLELISNQQCVPEKQDDSLANYAEKLSKEEARIDWQQSAEQIERCIRAFNPWPMSYFTV- 241
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + IK+ ++Q++ +PG ++ +A G + I +LQ G + +
Sbjct: 242 ---QEQLIKVWQAQVIAENHNEQPGTILSADKNGICVATGNGKLNITQLQPPGKKAMGAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 299 DLLNSRREWFTPGQQL 314
>gi|330813515|ref|YP_004357754.1| methionyl-tRNA formyltransferase [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486610|gb|AEA81015.1| methionyl-tRNA formyltransferase [Candidatus Pelagibacter sp.
IMCC9063]
Length = 304
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 125/309 (40%), Positives = 190/309 (61%), Gaps = 6/309 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MTL+VVFMGT +FAV L+ + S IV+VY+QPPR + RG+K S VH+ A +L
Sbjct: 1 MTLKVVFMGTPQFAVPALKKICESEIDIVAVYSQPPRKS-NRGMKIEKSPVHEFADNNNL 59
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P+KL ++E F S D+A+VVAYG +I + L + GF N HAS+LP+WRGAA
Sbjct: 60 NIRTPSKL-DNDWEYFKSLTFDLAIVVAYGQIILKNFLEIPEHGFLNIHASILPKWRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+IM D TGI+IM++++ LD GPV +++ ++ N T ++Q LS + A ++E
Sbjct: 119 PIQRSIMEQDTFTGISIMQIEEQLDAGPVLIKQEIELNENSTTGQVEQNLSEIGADKILE 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ +E+ PQ +N TYA+KI K + +++ R A+ + I L+P PGA+ E
Sbjct: 179 AIHLVEKKEAVYIPQDDNAATYAKKIKKEDETIDWSRDAKAIIAQINGLNPRPGAYFEY- 237
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ E+IK+ ++ GEG+PG V+N N IAC +G++ + +QR G ++ I FLLG
Sbjct: 238 ---RGEKIKIWKASYGSGEGEPGTVMNDNLQIACGKGSISVKEIQRPGKKIQPIKIFLLG 294
Query: 301 CPVIIGCIV 309
+ +
Sbjct: 295 FAIPESTQL 303
>gi|262273081|ref|ZP_06050898.1| methionyl-tRNA formyltransferase [Grimontia hollisae CIP 101886]
gi|262222837|gb|EEY74145.1| methionyl-tRNA formyltransferase [Grimontia hollisae CIP 101886]
Length = 314
Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 175/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+L++VF GT +FA L AL+SS H +V+VYTQP RPAG RG K S V AQE +P
Sbjct: 4 SLKIVFAGTPDFAARHLAALLSSHHEVVAVYTQPDRPAG-RGKKLTASPVKLLAQEHGIP 62
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE +Q + AD+ VVVAYGL++P+ +L+ +LG N H S+LPRWRGAA
Sbjct: 63 VYQPASLKAEEAQQELAAIGADIMVVVAYGLLLPKAVLDTPRLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD +TG+ IM+MD+ LDTG + + + I + +A L + L+ L A+V
Sbjct: 123 PIQRAIWAGDTQTGVTIMQMDEGLDTGDMLKIATLDIDAKETSATLYERLAELGPQALVA 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + N Q + YA+K+SK E ++++ SA + IRA +P+P + +
Sbjct: 183 CLGDIASGNAVAEKQNDELANYAKKLSKEEAQIDWSMSAVAIERCIRAFNPWPMSHFSVA 242
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
N IK+ ++ + E PG ++ +A +G +R++ +Q G + +
Sbjct: 243 DNN----IKIWDADVEEENSDEAPGTILSADKKGIRVATGEGVLRLLSIQPPGKKAMSAA 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 299 DILNSRRDWFEPGTHL 314
>gi|89052960|ref|YP_508411.1| methionyl-tRNA formyltransferase [Jannaschia sp. CCS1]
gi|123094406|sp|Q28V76|FMT_JANSC RecName: Full=Methionyl-tRNA formyltransferase
gi|88862509|gb|ABD53386.1| methionyl-tRNA formyltransferase [Jannaschia sp. CCS1]
Length = 301
Score = 196 bits (498), Expect = 4e-48, Method: Composition-based stats.
Identities = 138/308 (44%), Positives = 191/308 (62%), Gaps = 9/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT +F+V L ALV++ H +V+VY+QPPRPAG RG + S V +A+ L
Sbjct: 1 MRIIFMGTPDFSVPVLDALVAAEHEVVAVYSQPPRPAG-RGKRDRPSPVQARAETLGLTV 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E + L+ DVAVVVAYGL++PQ +L+A G N HASLLPRWRGAAP
Sbjct: 60 RNPVSLKSTEEQSALADLNADVAVVVAYGLILPQAVLDAPARGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD TG+ IM+M+ LDTGPV R+ I + T L LS + A A+V+A
Sbjct: 120 IHRAIMAGDTMTGVCIMQMEAGLDTGPVLLRRETSIGAEDTTGTLHDRLSAIGAKAIVDA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L++ PQ ++G+TYA KI K E +V++ A +++ I LSPFPGAW
Sbjct: 180 LSQLDELTPK--PQPDDGVTYATKIDKSEAKVDWTAPAPHINRQILGLSPFPGAWT---- 233
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+R+KLL+S++ G G GEV+ T+AC GAV I R+Q G +D D+LLG
Sbjct: 234 MAGGKRLKLLQSRVANGTGALGEVL-HGLTVACGDGAVEISRVQPEGKGAMDAKDWLLGA 292
Query: 302 PVIIGCIV 309
+ G ++
Sbjct: 293 RIAPGTVL 300
>gi|255101748|ref|ZP_05330725.1| methionyl-tRNA formyltransferase [Clostridium difficile QCD-63q42]
gi|255307616|ref|ZP_05351787.1| methionyl-tRNA formyltransferase [Clostridium difficile ATCC 43255]
Length = 309
Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 97/310 (31%), Positives = 165/310 (53%), Gaps = 3/310 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT + AV LQ ++ + I+ V TQP +P G RG K +S V + A E ++P
Sbjct: 1 MKIVFMGTPDIAVPCLQKIIDEKYEILGVVTQPDKPKG-RGKKLGMSPVKELAIENNIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K +E ++ S N DV VVVA+G ++P+ IL KLG N H SLLP++RGAAP
Sbjct: 60 YQPVKARDKEFIDKIKSLNPDVIVVVAFGQILPKEILEIPKLGCINVHVSLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I I+ G+ +TG+ M MD+ LDTG + +V + NI L ++ + A + E
Sbjct: 120 INWVIINGEEKTGVTTMYMDEGLDTGDMILKTEVNLDENITAGELHDKMMNIGAETLKET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ N P Q +YA ++K ++F +SA +HN +R ++P+P A+
Sbjct: 180 LRLIEEGNAPREVQNHEEFSYAPIMNKSLGNIDFSKSAREIHNLVRGVNPWPSAYTTYND 239
Query: 242 GNKH-ERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ K+L+ + + G +V ++ + I +Q + + +G+++ G
Sbjct: 240 VIMKVWKTKVLDEKSTKDVGTIIDVSKDGIKVSTIDNVLLIEEIQMPNKKRMLVGEYIKG 299
Query: 301 CPVIIGCIVG 310
+ G ++G
Sbjct: 300 NTIETGLVLG 309
>gi|330806739|ref|YP_004351201.1| methionyl-tRNA formyltransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327374847|gb|AEA66197.1| Methionyl-tRNA formyltransferase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 319
Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 122/315 (38%), Positives = 179/315 (56%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL++S H IV+VYTQP RPAG RG K + S V + A E +
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLASPHEIVAVYTQPDRPAG-RGQKLMPSPVKQLALEHGIE 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VLQPPTLRDAQAQAELAALKPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PIS+ L L+++ A+VE
Sbjct: 123 PIQRAVEAGDAESGVTVMRMEAGLDTGPMLLKVSTPISAEDTGGSLHDRLALIGPPAVVE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L L Q ++ TYA K++K E R+++ A + +RA +P+P +
Sbjct: 183 AIAGLAAGTLEGEVQDDSLATYAHKLNKDEARIDWSCPAVELERLVRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + EG+G PGE++ +AC + A+ + RLQ GG+ L+ D
Sbjct: 242 ---NGEALKVLAASYAEGKGAPGEILSASKDGLVVACGEQALCLTRLQLPGGKALNFSDL 298
Query: 298 LLGCP--VIIGCIVG 310
+G ++G
Sbjct: 299 FNSRREKFAVGTVLG 313
>gi|26249872|ref|NP_755912.1| methionyl-tRNA formyltransferase [Escherichia coli CFT073]
gi|300979824|ref|ZP_07174726.1| methionyl-tRNA formyltransferase [Escherichia coli MS 45-1]
gi|33301135|sp|Q8FD13|FMT_ECOL6 RecName: Full=Methionyl-tRNA formyltransferase
gi|26110300|gb|AAN82486.1|AE016767_246 Methionyl-tRNA formyltransferase [Escherichia coli CFT073]
gi|300409430|gb|EFJ92968.1| methionyl-tRNA formyltransferase [Escherichia coli MS 45-1]
gi|307555375|gb|ADN48150.1| methionyl-tRNA formyltransferase [Escherichia coli ABU 83972]
gi|315292337|gb|EFU51689.1| methionyl-tRNA formyltransferase [Escherichia coli MS 153-1]
Length = 315
Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 181/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H+IV V+TQP RPAG RG K + S V A++ LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAG-RGKKLMPSPVKVLAEDKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQRVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ + PG ++ +A G + ++ +Q AG + + +
Sbjct: 243 G----QPVKVWKASVIDTTTKAAPGTILEANKQGIQVATGDGILNLLSMQPAGKKAMSVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|606222|gb|AAA58085.1| methionyl-tRNA formyltransferase [Escherichia coli str. K-12
substr. MG1655]
Length = 315
Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 178/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVXDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|71737239|ref|YP_272334.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|123747734|sp|Q48QI2|FMT_PSE14 RecName: Full=Methionyl-tRNA formyltransferase
gi|71557792|gb|AAZ37003.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320326681|gb|EFW82726.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320331345|gb|EFW87288.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330881832|gb|EGH15981.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 314
Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 126/315 (40%), Positives = 183/315 (58%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S + IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSPYQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHEIP 62
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P L E + L+ D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VMQPPTLRAPEAQAELAALKPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PI++ L L+ L A+++
Sbjct: 123 PIQRAVQAGDAESGVTVMQMEAGLDTGPMLLKAVTPITAQDTGGTLHDRLAELGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L +L Q ++ YA K++K E R+++ R A+ + IRA +P+P +
Sbjct: 183 AIAGLADGSLVGEVQDDSLANYAHKLNKDEARLDWTRPADELERLIRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PG V+ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 242 ---NEETLKVLAADLAEGQGVPGTVLSASKDGLIVACGQNALRLTRLQLPGGKPLNFADL 298
Query: 298 LLGCP--VIIGCIVG 310
IG ++G
Sbjct: 299 FNSRREKFAIGTVLG 313
>gi|330500986|ref|YP_004377855.1| methionyl-tRNA formyltransferase [Pseudomonas mendocina NK-01]
gi|328915272|gb|AEB56103.1| methionyl-tRNA formyltransferase [Pseudomonas mendocina NK-01]
Length = 310
Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 122/314 (38%), Positives = 179/314 (57%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L+AL++S H I++VYTQP RPAG RG K + S V + A E +P
Sbjct: 1 MRIVFAGTPEFAAEHLKALLASPHQIIAVYTQPDRPAG-RGQKLMPSPVKQLAIEHGIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAAP
Sbjct: 60 FQPASLRNEQAQAELAALKPDLMVVVAYGLILPQVVLDTPRLGCINSHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+ AGD E+G+ +M+M+ LDTGP+ PIS++ L L+ L A+++A
Sbjct: 120 IQRAVQAGDAESGVTVMQMEAGLDTGPMLLKVTTPISASDTGGSLHDRLAQLGPQAVLQA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D LE L Q + YA K++K E R++F R A + +RA P+P +
Sbjct: 180 IDGLEAGTLKGEVQDDALANYAHKLNKDEARLDFSRPAVELERLVRAFHPWPICHTTLGG 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+K+ ++L EG+G PG ++ T+AC +G +R+ RLQ GG+ L D
Sbjct: 240 DA----LKVHAAELGEGKGAPGSILAADKQGLTVACGEGTLRLTRLQLPGGKPLAFSDLY 295
Query: 299 LGCP--VIIGCIVG 310
G ++G
Sbjct: 296 NSRREQFAPGLVLG 309
>gi|240948225|ref|ZP_04752613.1| methionyl-tRNA formyltransferase [Actinobacillus minor NM305]
gi|240297430|gb|EER47966.1| methionyl-tRNA formyltransferase [Actinobacillus minor NM305]
Length = 316
Score = 196 bits (497), Expect = 5e-48, Method: Composition-based stats.
Identities = 122/315 (38%), Positives = 181/315 (57%), Gaps = 8/315 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL++S H++++VYTQP +PAG RG K S V + A+ +P
Sbjct: 3 KLNIIFAGTPDFAAQHLQALLNSEHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEAHQIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +EE + L DV VVVAYGL++P+ +LNA K G N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKEEAQAELKALNADVMVVVAYGLILPEAVLNAPKYGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + I +A L +L+ L A++E
Sbjct: 122 PIQRSIWAGDQETGVTIMQMDIGLDTGDMLHKVTTAIDPQETSASLYAKLAELAPPALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D L + Q E YAEK++K E ++++ +A + +IRA +P P A+L +
Sbjct: 182 VLDGLSEQRFKPEKQEEALANYAEKLTKEEAKLDWNLTACQLERNIRAFNPAPIAYLTLP 241
Query: 241 IGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ERIK+ ++ ++ + K G V+ IA +G + I +LQ G + + + D
Sbjct: 242 VNGVEERIKVYQADVLPHQAKEAGTVLAVEKKGIQIATHEGVLNITQLQPQGKKPMSVQD 301
Query: 297 FLLGCP--VIIGCIV 309
FL G ++G +
Sbjct: 302 FLNGRADWFMVGEKL 316
>gi|189426266|ref|YP_001953443.1| methionyl-tRNA formyltransferase [Geobacter lovleyi SZ]
gi|238692146|sp|B3EAP0|FMT_GEOLS RecName: Full=Methionyl-tRNA formyltransferase
gi|189422525|gb|ACD96923.1| methionyl-tRNA formyltransferase [Geobacter lovleyi SZ]
Length = 316
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 110/310 (35%), Positives = 166/310 (53%), Gaps = 9/310 (2%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R++FMGT EFA TLQ L+ + ++V+V+TQP RP G RG K V + A +P
Sbjct: 5 RIIFMGTPEFACPTLQTLLDRTENVVAVFTQPDRPKG-RGQKLQPPPVKELALRHGIPVH 63
Query: 64 VPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P K E EQ + D+ VV+A+G ++P+ +L G N HASLLPR+RGAAP+
Sbjct: 64 QPPKVRTPEVIEQIRALQPDLIVVIAFGQILPKALLEIPPQGCVNVHASLLPRYRGAAPL 123
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
I+ G+ ETG+ M MD LDTGP+ + PI+ + + L +S L A + E +
Sbjct: 124 NWCIVNGETETGVTTMLMDVGLDTGPMLLKKTTPIAPDEDIQSLHDRMSQLGAELLGETL 183
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D L+ + Q ++ YA + K +++ + A +HN IR LS +PGA +
Sbjct: 184 DGLKTGRIVPEAQDDSQSCYAPLLKKEHGLIDWQKPAVTIHNQIRGLSAWPGAVTSLGGA 243
Query: 243 NKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+KL S + +G G PG +I +AC G++ I LQ AG + +D FL
Sbjct: 244 P----LKLYRSSIGQGAGTPGTIIATGKNGIEVACGHGSLIIHELQAAGSKKMDAASFLA 299
Query: 300 GCPVIIGCIV 309
G P+ +G ++
Sbjct: 300 GHPLALGTLL 309
>gi|322513189|ref|ZP_08066318.1| methionyl-tRNA formyltransferase [Actinobacillus ureae ATCC 25976]
gi|322121041|gb|EFX92871.1| methionyl-tRNA formyltransferase [Actinobacillus ureae ATCC 25976]
Length = 316
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 121/315 (38%), Positives = 185/315 (58%), Gaps = 8/315 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL+ S H++++VYTQP +PAG RG K S V + A++ ++P
Sbjct: 3 KLNIIFAGTPDFAAQHLQALLDSEHNVITVYTQPDKPAG-RGKKLQTSPVKQLAEQHNIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE + L DV VVVAYGL++P+ +LNA K G N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRNEEAQAELKALNADVMVVVAYGLILPEAVLNAPKYGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG + PI+++ +A L +L+ L A++E
Sbjct: 122 PIQRAIWAGDPETGVTIMQMDIGLDTGDMLHKVTTPIAADETSASLYAKLAELAPPALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ LE Q E YAEK+SK E ++++ +A + +IRA +P+P ++L +
Sbjct: 182 VLNGLESQAFKAEKQDEALSNYAEKLSKEEAKLDWNLTACQLERNIRAFNPWPISFLTLE 241
Query: 241 IGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + +K+ ++ ++ + K G V+ IA G + I +LQ +G + + + D
Sbjct: 242 VDGVEQSVKVYQANVLPHQAKVAGTVLQVDKNGIQIATQDGVLNITQLQPSGKKPMSVQD 301
Query: 297 FLLGCP--VIIGCIV 309
FL G ++G +
Sbjct: 302 FLNGRADWFVVGKQL 316
>gi|331659578|ref|ZP_08360516.1| methionyl-tRNA formyltransferase [Escherichia coli TA206]
gi|315297153|gb|EFU56433.1| methionyl-tRNA formyltransferase [Escherichia coli MS 16-3]
gi|331052793|gb|EGI24826.1| methionyl-tRNA formyltransferase [Escherichia coli TA206]
Length = 315
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 181/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H+IV V+TQP RPAG RG K + S V A++ LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAG-RGKKLMPSPVKVLAEDKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDTETGVTIMQMDIGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ + PG ++ +A G + ++ +Q AG + + +
Sbjct: 243 G----QPVKVWKASVIDTTTKAAPGTILEANKQGIQVATGDGILNLLSMQPAGKKAMSVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|324009053|gb|EGB78272.1| methionyl-tRNA formyltransferase [Escherichia coli MS 57-2]
Length = 315
Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 181/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H+IV V+TQP RPAG RG K + S V A++ LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAG-RGKKLMPSPVKVLAEDKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDTETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ + PG ++ +A G + ++ +Q AG + + +
Sbjct: 243 G----QPVKVWKASVIDTTTKAAPGTILEANKQGIQVATGDGILNLLSMQPAGKKAMSVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|91212714|ref|YP_542700.1| methionyl-tRNA formyltransferase [Escherichia coli UTI89]
gi|117625570|ref|YP_858893.1| methionyl-tRNA formyltransferase [Escherichia coli APEC O1]
gi|218560349|ref|YP_002393262.1| methionyl-tRNA formyltransferase [Escherichia coli S88]
gi|218691574|ref|YP_002399786.1| methionyl-tRNA formyltransferase [Escherichia coli ED1a]
gi|237703017|ref|ZP_04533498.1| methionyl-tRNA formyltransferase [Escherichia sp. 3_2_53FAA]
gi|306816370|ref|ZP_07450508.1| methionyl-tRNA formyltransferase [Escherichia coli NC101]
gi|122990716|sp|Q1R645|FMT_ECOUT RecName: Full=Methionyl-tRNA formyltransferase
gi|166214893|sp|A1AGH9|FMT_ECOK1 RecName: Full=Methionyl-tRNA formyltransferase
gi|226704295|sp|B7MCQ3|FMT_ECO45 RecName: Full=Methionyl-tRNA formyltransferase
gi|254789354|sp|B7N172|FMT_ECO81 RecName: Full=Methionyl-tRNA formyltransferase
gi|91074288|gb|ABE09169.1| methionyl-tRNA formyltransferase [Escherichia coli UTI89]
gi|115514694|gb|ABJ02769.1| methionyl-tRNA formyltransferase [Escherichia coli APEC O1]
gi|218367118|emb|CAR04892.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli S88]
gi|218429138|emb|CAR10090.2| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Escherichia coli ED1a]
gi|222034996|emb|CAP77739.1| Methionyl-tRNA formyltransferase [Escherichia coli LF82]
gi|226902281|gb|EEH88540.1| methionyl-tRNA formyltransferase [Escherichia sp. 3_2_53FAA]
gi|281180322|dbj|BAI56652.1| methionyl-tRNA formyltransferase [Escherichia coli SE15]
gi|294493320|gb|ADE92076.1| methionyl-tRNA formyltransferase [Escherichia coli IHE3034]
gi|305850766|gb|EFM51223.1| methionyl-tRNA formyltransferase [Escherichia coli NC101]
gi|307628322|gb|ADN72626.1| methionyl-tRNA formyltransferase [Escherichia coli UM146]
gi|312947838|gb|ADR28665.1| methionyl-tRNA formyltransferase [Escherichia coli O83:H1 str. NRG
857C]
gi|315284578|gb|EFU44023.1| methionyl-tRNA formyltransferase [Escherichia coli MS 110-3]
gi|323950201|gb|EGB46083.1| methionyl-tRNA formyltransferase [Escherichia coli H252]
gi|323954590|gb|EGB50373.1| methionyl-tRNA formyltransferase [Escherichia coli H263]
Length = 315
Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 181/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H+IV V+TQP RPAG RG K + S V A++ LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAG-RGKKLMPSPVKVLAEDKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ + PG ++ +A G + ++ +Q AG + + +
Sbjct: 243 G----QPVKVWKASVIDTTTKAAPGTILEANKQGIQVATGDGILNLLSMQPAGKKAMSVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|229846678|ref|ZP_04466786.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 7P49H1]
gi|229810771|gb|EEP46489.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 7P49H1]
Length = 318
Score = 195 bits (496), Expect = 6e-48, Method: Composition-based stats.
Identities = 114/318 (35%), Positives = 185/318 (58%), Gaps = 10/318 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQA+++S H++++VYTQP +PAG RG K S V + A++ +
Sbjct: 1 MKSLNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEQNN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P L +EE + L DV VVVAYGL++P+ +L+A +LG N H S+LPRWRG
Sbjct: 60 IPVYQPKSLRKEEAQSELKALNADVMVVVAYGLILPKAVLDAPRLGCLNVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQR+I AGD +TG+ IM+MD+ LDTG + I + L +L+ L A+
Sbjct: 120 AAPIQRSIWAGDVQTGVTIMQMDESLDTGDMLHKVYCDILPTETSTSLYNKLAELAPSAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ +D LE + Q + YAEK+SK E ++++ A + +IRA +P+P A+
Sbjct: 180 IDVLDNLENSKFIAEKQDGSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIAYFS 239
Query: 239 MMIGN-KHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + +K+ +++++ + KP G ++ IA G + +++LQ AG +++
Sbjct: 240 TEDKDGNAQTLKVYQAEVLPHQDKPVGTILSADKNGIQIATVDGVLNLLQLQPAGKKLMS 299
Query: 294 IGDFLLGCP--VIIGCIV 309
D L G IG ++
Sbjct: 300 AQDLLNGRAEWFAIGKVL 317
>gi|330952316|gb|EGH52576.1| methionyl-tRNA formyltransferase [Pseudomonas syringae Cit 7]
Length = 314
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 122/315 (38%), Positives = 183/315 (58%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S+H IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSTHQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHDVP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P + + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VMQPPTLRDPDAQAELAALQPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PI++ L L+ L A+++
Sbjct: 123 PIQRAVQAGDAESGVTVMRMEAGLDTGPMLLKAVTPITAQDTGGTLHDRLAELGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L + +L Q ++ YA K++K E R+++ R A+ + +RA +P+P +
Sbjct: 183 AIAGLAEGSLVGEVQDDSLANYAHKLNKDEARLDWTRPADELERLVRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PG ++ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 242 ---NEETLKVLTADLAEGQGAPGTILGASKDGLIVACGQNALRLTRLQLPGGKPLNFTDL 298
Query: 298 LLGCP--VIIGCIVG 310
IG ++G
Sbjct: 299 FNSRREKFAIGTVLG 313
>gi|315122857|ref|YP_004063346.1| methionyl-tRNA formyltransferase [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496259|gb|ADR52858.1| methionyl-tRNA formyltransferase [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 302
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 220/303 (72%), Positives = 261/303 (86%), Gaps = 1/303 (0%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGTSEFAVATL+AL SSSH+I++VYTQPPRPAGRRGLK+V SAV++ A E ++ L+P K
Sbjct: 1 MGTSEFAVATLRAL-SSSHNILAVYTQPPRPAGRRGLKTVPSAVYQTANELNIQTLIPEK 59
Query: 68 LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127
L Q EYEQFL+FNADVAVVV+YGL+IP+RIL+ATKLGFYNGHASLLPRWRGAAPIQRAIM
Sbjct: 60 LRQAEYEQFLNFNADVAVVVSYGLIIPKRILDATKLGFYNGHASLLPRWRGAAPIQRAIM 119
Query: 128 AGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQ 187
AGD+ETGIA+MKMD+HLDTGP+ ++++PI N++ L LS++CA +VE MD+LE
Sbjct: 120 AGDSETGIAVMKMDEHLDTGPIVLVKRIPIPCNMSAGVLHDALSIMCASTIVEVMDRLEN 179
Query: 188 NNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHER 247
NN+ SPQ+ENGITYA+KI K ET ++F +S+E+VHNHIRALSP PGAWL MMI N+ ER
Sbjct: 180 NNISFSPQVENGITYAQKILKSETHIDFSQSSEDVHNHIRALSPLPGAWLNMMIRNRLER 239
Query: 248 IKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGC 307
IKLLESQLVEG G PGE+IN NFTIACSQGA+RIMRLQRAGG LDI DFLLG P I+GC
Sbjct: 240 IKLLESQLVEGNGHPGEIINSNFTIACSQGAIRIMRLQRAGGHALDIKDFLLGYPAIVGC 299
Query: 308 IVG 310
IVG
Sbjct: 300 IVG 302
>gi|46200885|ref|ZP_00056291.2| COG0223: Methionyl-tRNA formyltransferase [Magnetospirillum
magnetotacticum MS-1]
Length = 305
Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats.
Identities = 131/310 (42%), Positives = 195/310 (62%), Gaps = 7/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +F+V L +L+ + H +V VY+QPPRPAG RG K L+ VH A E +
Sbjct: 1 MKLVFMGTPDFSVPILGSLIEAGHQVVCVYSQPPRPAG-RGHKEQLTPVHAFAHERGIAV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E +F + +AD+AVV AYGL++PQ +L+A +LG N HASLLPRWRGAAP
Sbjct: 60 RTPKSLKSPEAQAEFAALDADIAVVAAYGLILPQAVLDAPRLGCLNVHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+AGD ETGI IM+MD LDTG + + ++ + L L+ + A M E
Sbjct: 120 IQRAILAGDAETGITIMQMDAGLDTGAMLARESIVLAPDTTAPWLHDMLAAMGARMMAEV 179
Query: 182 MDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + + +PQ G+TYA K++K E +++ +SA + +RAL+P+PG W EM
Sbjct: 180 LGRLADDEVVTATPQPAEGVTYAHKLAKEEGLLDWRQSAVELDRKVRALNPWPGVWFEMA 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
ERIK+ E+ ++ G G+PG V++ T+AC + A+R +++QRAG V+ G+ L G
Sbjct: 240 G----ERIKVWEAAVLPGSGQPGTVLDDQMTVACGKFALRPLKVQRAGKGVMTTGEMLRG 295
Query: 301 CPVIIGCIVG 310
+ G ++G
Sbjct: 296 HAIPKGTVLG 305
>gi|218132888|ref|ZP_03461692.1| hypothetical protein BACPEC_00749 [Bacteroides pectinophilus ATCC
43243]
gi|217991761|gb|EEC57765.1| hypothetical protein BACPEC_00749 [Bacteroides pectinophilus ATCC
43243]
Length = 315
Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats.
Identities = 106/316 (33%), Positives = 166/316 (52%), Gaps = 13/316 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT +FAVATL+ ++++ H + +V TQP +P G RG +S V + A E +
Sbjct: 5 MRVVFMGTPDFAVATLEDIINAGHIVEAVVTQPDKPKG-RGGAVAMSPVKETALEHGIEV 63
Query: 63 LVP--TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K E YE+ + DV VVVA+G ++P IL K G N HASLLP +RGAA
Sbjct: 64 LQPVKVKNDNEFYERMKQIDPDVIVVVAFGQILPDSILELPKYGCINVHASLLPAYRGAA 123
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ G ETG+ M+MD LDTG + ++ + + L LS +V+
Sbjct: 124 PIQWAVIDGLEETGVTTMQMDHGLDTGDIIMQSRIRLDAKETGGSLFDRLSSEGGRLLVK 183
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ +E + Q ++ YA+ ++K ++F A N+ IR L+P+P A+ +
Sbjct: 184 TLEAVENGTATRTKQDDSLSNYAKMLTKSLGNIDFNEGAVNIERLIRGLNPWPSAYTHL- 242
Query: 241 IGNKHERIKLLESQLVE---GEGKPGE---VINPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +K+ E+ + E KPG V F + C + A+ I +Q G + +
Sbjct: 243 ---NGKTLKIWEADVCECNDDNMKPGTVFNVTKDGFCVKCGKDALSIGEVQLEGKKRMAS 299
Query: 295 GDFLLGCPVIIGCIVG 310
FL G + G ++G
Sbjct: 300 DAFLRGFKLESGTVLG 315
>gi|319407941|emb|CBI81595.1| Methionyl-tRNA formyltransferase [Bartonella schoenbuchensis R1]
Length = 309
Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats.
Identities = 158/307 (51%), Positives = 205/307 (66%), Gaps = 2/307 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR+ FMGT +F+V L AL+ + H IV+VY+QPPRPAGRRGLK V S V AQ S+
Sbjct: 1 MVLRLGFMGTPDFSVPILHALLDAGHDIVAVYSQPPRPAGRRGLKLVPSPVQNVAQAKSI 60
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P EE ++F + + DVAVV AYGL++P+ IL + G N HASLLPRWRGA
Sbjct: 61 PVFTPQSLKTPEEQDRFAALSIDVAVVAAYGLLLPKAILETPRFGCLNVHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD ETGI IMKMD+ LDTGP+A R + I+ N+ L +LS + A +V
Sbjct: 121 APIQRAIMAGDQETGIMIMKMDEGLDTGPIALSRSITITDNMTAHELSNKLSHIGAKLIV 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EA+ LE+N L L+PQ G+TYA KI K ETR+++ +SA+++H I ALSPFPG W M
Sbjct: 181 EALSTLERNELKLTPQPLEGVTYAAKIKKEETRIDWTQSAQSIHKCICALSPFPGCWCIM 240
Query: 240 MIGNKHERIKLLESQLVEG-EGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
IG K ER+K+L S++VEG + G + N I C +G + I LQR+GG++LD FL
Sbjct: 241 DIGGKQERVKILGSRVVEGVSLEIGRIEAKNLIIHCGKGQIEITHLQRSGGKILDSPTFL 300
Query: 299 LGCPVII 305
G +
Sbjct: 301 RGTNISA 307
>gi|283797832|ref|ZP_06346985.1| methionyl-tRNA formyltransferase [Clostridium sp. M62/1]
gi|291074520|gb|EFE11884.1| methionyl-tRNA formyltransferase [Clostridium sp. M62/1]
Length = 312
Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats.
Identities = 106/314 (33%), Positives = 170/314 (54%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++V+MGT +FAV L ALV + H + +V TQP +P G RG +++ V +KA + +P
Sbjct: 1 MKLVYMGTPDFAVPPLTALVEAGHEVAAVVTQPDKPKG-RGKAVLMTPVKEKALSYGIPV 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ ++E N D VV A+G ++P+ IL K G N HASLLP++RGAA
Sbjct: 60 YQPARIKKDEEFLKTLREINPDAIVVAAFGQILPKEILELPKYGCVNIHASLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ G+ E+GI M MD LDTG + +P++ + L ++LS +++
Sbjct: 120 PIQWAVIDGEKESGITTMMMDVGLDTGDMLDRTVIPLAEDETGGSLFEKLSRAGGPLILK 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ LE + Q E G TYA + K +++ +SA + IR L+P+P A+
Sbjct: 180 TLEALENGTAVRTKQPEEGATYAGMLDKSLGNIDWTQSAAKIERLIRGLNPWPSAYTGYK 239
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +KL + ++EG EG PGE+I F + GA+ + LQ G + +D
Sbjct: 240 G----KTMKLWAADVLEGTFEGVPGEIIKVEKERFLVRTGDGALAVKELQLEGKKRMDAA 295
Query: 296 DFLLGCPVIIGCIV 309
FL G + G I+
Sbjct: 296 SFLRGFSLEEGEIL 309
>gi|311277758|ref|YP_003939989.1| methionyl-tRNA formyltransferase [Enterobacter cloacae SCF1]
gi|308746953|gb|ADO46705.1| methionyl-tRNA formyltransferase [Enterobacter cloacae SCF1]
Length = 315
Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats.
Identities = 121/316 (38%), Positives = 181/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H +V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHQVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRAQENQQLVAALNADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ +A L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAQDTSATLYDKLAELGPQGLIA 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + Q E+ +TYAEK+SK E RV++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLAEGATRPEVQDESQVTYAEKLSKEEARVDWTLSAAQIERCIRAFNPWPMSWLEI- 241
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ + G +PG ++ +A G + + LQ AG + +
Sbjct: 242 ---DGQPVKVWQAAALPGPVNAEPGTILDASKQGIQVATGDGILSLQSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 299 DLLNSRREWFIPGNRL 314
>gi|70733534|ref|YP_257173.1| methionyl-tRNA formyltransferase [Pseudomonas fluorescens Pf-5]
gi|123762267|sp|Q4KKR0|FMT_PSEF5 RecName: Full=Methionyl-tRNA formyltransferase
gi|68347833|gb|AAY95439.1| methionyl-tRNA formyltransferase [Pseudomonas fluorescens Pf-5]
Length = 319
Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats.
Identities = 123/315 (39%), Positives = 181/315 (57%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S + IV+VYTQP RPAG RG K + S V + A E +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSPYQIVAVYTQPDRPAG-RGQKLMPSPVKQLALENDIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P E + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VLQPPTLRNAEAQAELAALKPDLMVVVAYGLILPQAVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ++G+ +M+M+ LDTGP+ PIS+ L L+ + A+++
Sbjct: 123 PIQRAVQAGDAQSGVTVMRMEAGLDTGPMLLKVSTPISAEDTGGSLHDRLAEMGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ L L Q ++ TYA K++K E R+++ R A + +RA +P+P +
Sbjct: 183 AIEGLAAGTLEGEVQDDSLATYAHKLNKDEARIDWSRPAVELERLVRAFNPWPICHSSL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PGE++ +AC + A+ + RLQ GG+ L+ D
Sbjct: 242 ---NGEALKVLAATLAEGKGAPGEILGASKDGLIVACGEQALCLTRLQLPGGKALNFSDL 298
Query: 298 LLGCP--VIIGCIVG 310
IG ++G
Sbjct: 299 FNSRREKFAIGTVLG 313
>gi|240147076|ref|ZP_04745677.1| methionyl-tRNA formyltransferase [Roseburia intestinalis L1-82]
gi|257200761|gb|EEU99045.1| methionyl-tRNA formyltransferase [Roseburia intestinalis L1-82]
gi|291536617|emb|CBL09729.1| methionyl-tRNA formyltransferase [Roseburia intestinalis M50/1]
Length = 311
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 91/313 (29%), Positives = 162/313 (51%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT +F+V TL+ ++ + H +V V +QP + G R + V + A +
Sbjct: 1 MRVIFMGTPDFSVGTLEEIIKAGHEVVLVVSQPDKAVG-RSKALKYTPVKECAIAHGIEV 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ ++L D+ +VVA+G +IP+ +L+ K G N HASLLP++RGAAP
Sbjct: 60 YQPERVRDSACIEYLKSFHADIMIVVAFGQIIPKAVLDMPKYGCVNVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ GD TG++ +MD+ +DTG + KV I + L L+ + A V+
Sbjct: 120 IQWAVINGDPYTGVSTQRMDEGVDTGDIILEEKVEIRPDETGGSLFDRLAEVGAELCVKT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ +E +PQ + T+ KI K +++ +SA+ + IR L+P+P A+ +
Sbjct: 180 IEAIENGTAVYTPQDNSKATHTAKIHKELGSIDWTKSAKEIECLIRGLNPWPSAYTRL-- 237
Query: 242 GNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ + ++ E + PG +I +F + G + ++ +Q G + +
Sbjct: 238 --DGKTLKIWRANVLPDEKKAAPGCIIKAEKGSFLVQTGDGVLELLEVQLEGKKRMTTDA 295
Query: 297 FLLGCPVIIGCIV 309
FL G V G
Sbjct: 296 FLNGYTVEEGTYF 308
>gi|167760431|ref|ZP_02432558.1| hypothetical protein CLOSCI_02805 [Clostridium scindens ATCC 35704]
gi|167661930|gb|EDS06060.1| hypothetical protein CLOSCI_02805 [Clostridium scindens ATCC 35704]
Length = 312
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 166/313 (53%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMGT EF+V TL+AL + H +V TQP +P G RG + V + A E+ +P
Sbjct: 1 MKVIFMGTPEFSVGTLKALAEAGHEVVLAVTQPDKPKG-RGGRMQYPPVKEMALEYGIPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ E + + AD+ VV+A+G ++P+ IL T G N HASLLP++RGAAP
Sbjct: 60 FQPKKIRAPECVEELRKYEADIMVVIAFGQILPKEILEMTPYGCVNVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ TG+ M+MD+ LDTG + +V + L +L+ A V
Sbjct: 120 IQWAVINGEKVTGVTTMQMDEGLDTGDMLLKEEVILDEEETGGSLHDKLAEAGARLCVRT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE + Q E+ YA ++K +++ + A ++ +R L+P+P A+
Sbjct: 180 LKALEDGSAVREKQGESPTEYARMLTKELGSIDWTQDALSIERLVRGLNPWPSAYT---- 235
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ E++++EGE PG ++ F + G ++I+ LQ G + +
Sbjct: 236 DWNGKVMKIWEAKVMEGETGKAPGTIVKIEKDGFLVQAGAGLLKILELQIPGKKRMKADA 295
Query: 297 FLLGCPVIIGCIV 309
FL G V G ++
Sbjct: 296 FLRGYQVEEGSML 308
>gi|16762875|ref|NP_458492.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29144362|ref|NP_807704.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213161459|ref|ZP_03347169.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213418737|ref|ZP_03351803.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
gi|213425784|ref|ZP_03358534.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213650880|ref|ZP_03380933.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|289824192|ref|ZP_06543787.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|21542046|sp|Q8Z1X0|FMT_SALTI RecName: Full=Methionyl-tRNA formyltransferase
gi|25320691|pir||AI1009 methionyl-tRNA formyltransferase (EC 2.1.2.9) [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16505182|emb|CAD09178.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29140000|gb|AAO71564.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
Length = 315
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 181/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL++S H+IV V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLTSGHNIVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E + ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQHLVADLHADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGSLYNKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +T+AEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTATPEAQNEALVTHAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEI- 241
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++E + PG ++ +A +G + ++ LQ AG + +
Sbjct: 242 ---DGQPVKVWQASVIEDATQSLPGTILAATKQGIQVATGKGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 299 DLLNSRREWFIPGNRL 314
>gi|321315339|ref|YP_004207626.1| methionyl-tRNA formyltransferase [Bacillus subtilis BSn5]
gi|320021613|gb|ADV96599.1| methionyl-tRNA formyltransferase [Bacillus subtilis BSn5]
Length = 317
Score = 195 bits (495), Expect = 8e-48, Method: Composition-based stats.
Identities = 101/317 (31%), Positives = 162/317 (51%), Gaps = 13/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT R+VFMGT +F+V L+ L+ + +V V TQP RP G R V ++A +
Sbjct: 1 MT-RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKG-RKKVMTPPPVKEEALRHGI 58
Query: 61 PALVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P K+ E + + + D+ V A+G ++P+ +L++ K G N HASLLP RG
Sbjct: 59 PVLQPEKVRLTEEIEKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +I+ G +TG+ IM M + LD G + +V I N L +LSV A +
Sbjct: 119 APIHYSILQGKKKTGVTIMYMVEKLDAGDMISKVEVDIEETDNVGTLHDKLSVAGAKLLS 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + ++ Q E TYA I + + +++ R+ E ++N IR L+P+P A+ +
Sbjct: 179 ETVPNVIAGSISPEKQDEEKATYAPNIKREQELLDWSRTGEELYNQIRGLNPWPVAYTTL 238
Query: 240 MIGNKHERIKLLESQ--LVEGEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLD 293
N +K+ ES+ + +PG V+ +A A+ + LQ AG + +
Sbjct: 239 NGQN----LKVWESKKTPASTKAEPGTVVAVEKEGIIVATGNDTALLLTELQPAGKKRMK 294
Query: 294 IGDFLLGCPVIIGCIVG 310
DF+ G V G ++G
Sbjct: 295 GEDFVRGAHVEAGDVLG 311
>gi|168823235|ref|ZP_02835235.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205340496|gb|EDZ27260.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|320087853|emb|CBY97616.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)N-formyltransferase
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
Length = 315
Score = 195 bits (494), Expect = 8e-48, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 181/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL++S H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E + ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQHLVADLHADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGSLYNKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +T+AEK+SK E R+++ SA + IRA +P+P +WL++
Sbjct: 183 TLKQLADGTATPEAQNEALVTHAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLKI- 241
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++E + PG ++ +A +G + ++ LQ AG + +
Sbjct: 242 ---DGQPVKVWQASVIEDATQSLPGTILAATKQGIQVATGKGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 299 DLLNSRREWFIPGNRL 314
>gi|90581175|ref|ZP_01236974.1| methionyl-tRNA formyltransferase [Vibrio angustum S14]
gi|90437696|gb|EAS62888.1| methionyl-tRNA formyltransferase [Vibrio angustum S14]
Length = 314
Score = 195 bits (494), Expect = 9e-48, Method: Composition-based stats.
Identities = 113/316 (35%), Positives = 175/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT +FA L AL+SS H +V+VYTQP RPAG RG K S V A E +P
Sbjct: 4 PLRIVFAGTPDFAARHLAALLSSQHQVVAVYTQPDRPAG-RGKKLTASPVKNIALEHDIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E ++ + AD+ VVVAYGL++PQ +L+ +LG N H S+LPRWRGAA
Sbjct: 63 VYQPASLRNEEAQQELAAIEADIMVVVAYGLLLPQEVLDTPRLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI + +A + ++L+ L A+++
Sbjct: 123 PIQRSIWAGDTETGVTIMQMDIGLDTGDMLKVATLPIEATDTSATMYEKLADLGPDALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K+SK E +++ A + +RA +P+P ++ +
Sbjct: 183 CLSDIANGTAVAVKQDDELANYAKKLSKEEALIDWSMDAAAIERCVRAFNPWPMSYFTVA 242
Query: 241 IGNKHERIKLLESQL-VEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
N IK+ ++ + + +GK PG ++ +A GA+R++ LQ G + +
Sbjct: 243 EQN----IKVWQAAVETDNQGKAPGTILSADKQGILVATGNGALRLLSLQPPGKKAMTAA 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 299 DLLNSRREWFESGAQL 314
>gi|332996760|gb|EGK16385.1| methionyl-tRNA formyltransferase [Shigella flexneri K-272]
gi|333014515|gb|EGK33863.1| methionyl-tRNA formyltransferase [Shigella flexneri K-227]
Length = 315
Score = 195 bits (494), Expect = 9e-48, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 178/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S + A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPIKVLAEEEGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P + LE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSRLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ PG ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|237801647|ref|ZP_04590108.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024506|gb|EGI04562.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 314
Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 122/315 (38%), Positives = 182/315 (57%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S+H IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSAHQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHDIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P + + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VMQPPTLRDPAAQAELAALSPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PI++ L L+ L A+++
Sbjct: 123 PIQRAVQAGDAESGVTVMRMEAGLDTGPMLLKAVTPITAQDTGGTLHDRLAELGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L + +L Q ++ YA K++K E R+++ R A+ + +RA +P+P +
Sbjct: 183 AISGLAEGSLIGEVQDDSLANYAHKLNKDEARIDWSRPADELERLVRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG G PG ++ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 242 ---NEETLKVLAADLAEGRGAPGTILSASKEGLIVACGQNALRLTRLQLPGGKPLNFTDL 298
Query: 298 LLGCP--VIIGCIVG 310
IG ++G
Sbjct: 299 FNSRREKFAIGTVLG 313
>gi|288871447|ref|ZP_06117610.2| methionyl-tRNA formyltransferase [Clostridium hathewayi DSM 13479]
gi|288863454|gb|EFC95752.1| methionyl-tRNA formyltransferase [Clostridium hathewayi DSM 13479]
Length = 321
Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 101/314 (32%), Positives = 161/314 (51%), Gaps = 11/314 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VFMGT +F+V L ALV + H +++V TQP +P G RG + + V KA E+ +P
Sbjct: 9 KMRIVFMGTPDFSVPALTALVEAGHDVIAVVTQPDKPKG-RGKEVQMPPVKVKALEYGIP 67
Query: 62 ALVPTKLGQEEYEQ-FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K E+ D VV A+G ++P+ IL+ K G N HASLLP++RGA+
Sbjct: 68 VYQPVKARDPEFVSLLKEMQPDAMVVAAFGQLLPKTILDIPKYGCVNIHASLLPKYRGAS 127
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ G+ +GI M M + LDTG + V + L +LS + +++
Sbjct: 128 PIQYAVINGEPVSGITTMMMAEALDTGDILDQETVALDEKETGGSLHDKLSAIGGRLIIK 187
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ KLE + Q E Y I K + +++ + A ++ IR L+P+P A+
Sbjct: 188 TLKKLEDGTAVRTVQDEKETCYVGMIKKSKGDIDWSQDAVSIERLIRGLNPWPSAYT--- 244
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIG 295
G + IKL E+ ++E EG G+V+ + +G + + LQ G + +D G
Sbjct: 245 -GWEGRIIKLWEADVLEEEYEGACGQVVKTGKDCLYVKTGKGTLAVKELQLQGKKRMDTG 303
Query: 296 DFLLGCPVIIGCIV 309
FL G + G +
Sbjct: 304 AFLRGYQIAEGTVF 317
>gi|254509770|ref|ZP_05121837.1| methionyl-tRNA formyltransferase [Rhodobacteraceae bacterium KLH11]
gi|221533481|gb|EEE36469.1| methionyl-tRNA formyltransferase [Rhodobacteraceae bacterium KLH11]
Length = 304
Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 152/308 (49%), Positives = 190/308 (61%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT +F+V L ALV + H I +VY QPPRPAG RG K + VH A L
Sbjct: 1 MRVIFMGTPDFSVPVLDALVEAGHEIAAVYCQPPRPAG-RGKKDRPTPVHAWAAALGLEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
PT EE + F + NAD+AVVVAYGL++PQ +L+A G N HASLLPRWRGAAP
Sbjct: 60 RHPTALKSPEEQDSFAALNADIAVVVAYGLILPQSVLDAPTHGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD +TGI IM+M+ LDTGPV I + TA L LS + A +VEA
Sbjct: 120 IHRAIMAGDAQTGICIMQMEAGLDTGPVLLREATDIGAEETTAQLHDRLSAMGAKLIVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + L PQ E+G+ YA KI K E R+++ SA V IR LSPFPGAW E+
Sbjct: 180 L--AKLPGLTSQPQPEDGVIYAAKIDKSEARIDWSASAAEVDRKIRGLSPFPGAWTEVGG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
RIKLL S+L EG+G PGEV++ +AC GAV ++RLQRAG D FL G
Sbjct: 238 D----RIKLLASRLAEGQGIPGEVLDDRLRVACGAGAVELLRLQRAGKGAQDRETFLRGW 293
Query: 302 PVIIGCIV 309
P+ +G +
Sbjct: 294 PIPVGTRL 301
>gi|317049807|ref|YP_004117455.1| methionyl-tRNA formyltransferase [Pantoea sp. At-9b]
gi|316951424|gb|ADU70899.1| methionyl-tRNA formyltransferase [Pantoea sp. At-9b]
Length = 314
Score = 195 bits (494), Expect = 1e-47, Method: Composition-based stats.
Identities = 116/315 (36%), Positives = 179/315 (56%), Gaps = 12/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+++F GT +FA L AL++S H +V V+TQP RPAG RG K S V AQ +P
Sbjct: 4 PLKIIFAGTPDFAARHLDALLASEHQVVGVFTQPDRPAG-RGNKLTPSPVKVLAQAHDVP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E+ +Q ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPKSLKPEDNQQLVAALQADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + PI+ +A L +L+ L M++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLHKLACPITQQDTSATLYDKLAQLGPEGMLK 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+++L + Q E ++YAEK+SK E R+++ SA + IRA +P+P ++ +
Sbjct: 183 TLEQLATGSAQPEKQDEALVSYAEKLSKEEARLDWTLSAAQLERCIRAFNPWPMSYFMVD 242
Query: 241 IGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ ++ ++ + K PGE++ IA + G + ++ LQ AG + + D
Sbjct: 243 D----QPVKVWQASVLPHQAKQPGEILHADKQGIQIATADGVLNLLSLQPAGKKAMSAQD 298
Query: 297 FLLGCP--VIIGCIV 309
L G I+
Sbjct: 299 LLNSRREWFTPGSIL 313
>gi|325680330|ref|ZP_08159890.1| methionyl-tRNA formyltransferase [Ruminococcus albus 8]
gi|324108039|gb|EGC02295.1| methionyl-tRNA formyltransferase [Ruminococcus albus 8]
Length = 310
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 112/314 (35%), Positives = 169/314 (53%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV +++AL + H I +V+ QP +P G RG K V V A + +P
Sbjct: 1 MKIVFMGTPDFAVPSIKALYDAGHDIQAVFCQPDKPKG-RGYKLVPPPVKVFALDKDIPI 59
Query: 63 LVP---TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P G+E + D VV AYG ++P+ +L+ +LG N H SLLP++RGA
Sbjct: 60 YQPKSLKNGGEEFIKVIEDLAPDCIVVAAYGKILPKAVLDIPRLGCVNVHGSLLPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
PIQ A++ + TGI M M + LDTG + + I N A L L+ + A +V
Sbjct: 120 GPIQWAVLNDEKTTGITTMLMGEGLDTGDMLLKCETEIGENETAAELFDRLADMGAELIV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E +DKLE+ + PQ E TYA ++K + ++F +SA VH I LS +P A +
Sbjct: 180 ETLDKLEKGEISPVPQNEEEATYAPMLTKDLSPIDFTKSARAVHKQICGLSDWPCASTTI 239
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVIN-PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+RIK+ S++V G G V+N + TIAC G V++ +Q G + + D
Sbjct: 240 GG----KRIKVYRSEIVAGSTTKAAGTVVNVKDLTIACGDGMVKLTEIQAEGSKRMATAD 295
Query: 297 FLLGCPVIIGCIVG 310
+L G PV G ++G
Sbjct: 296 YLRGKPVAEGTVLG 309
>gi|168264712|ref|ZP_02686685.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|205346876|gb|EDZ33507.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
Length = 315
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 182/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL++S H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLHADVMVVVAYGLILPKAMLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGSLYNKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +T+AEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTATPEAQNEALVTHAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEI- 241
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++E + PG ++ +A +G + ++ LQ AG + +
Sbjct: 242 ---DGQPVKVWQASVIEDATQSLPGTILAATKQGIQVATGKGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 299 DLLNSRREWFIPGNRL 314
>gi|254976175|ref|ZP_05272647.1| methionyl-tRNA formyltransferase [Clostridium difficile QCD-66c26]
gi|255093564|ref|ZP_05323042.1| methionyl-tRNA formyltransferase [Clostridium difficile CIP 107932]
gi|255315308|ref|ZP_05356891.1| methionyl-tRNA formyltransferase [Clostridium difficile QCD-76w55]
gi|255517976|ref|ZP_05385652.1| methionyl-tRNA formyltransferase [Clostridium difficile QCD-97b34]
gi|255651092|ref|ZP_05397994.1| methionyl-tRNA formyltransferase [Clostridium difficile QCD-37x79]
gi|260684157|ref|YP_003215442.1| methionyl-tRNA formyltransferase [Clostridium difficile CD196]
gi|260687816|ref|YP_003218950.1| methionyl-tRNA formyltransferase [Clostridium difficile R20291]
gi|306520943|ref|ZP_07407290.1| methionyl-tRNA formyltransferase [Clostridium difficile QCD-32g58]
gi|260210320|emb|CBA64644.1| methionyl-tRNA formyltransferase [Clostridium difficile CD196]
gi|260213833|emb|CBE05819.1| methionyl-tRNA formyltransferase [Clostridium difficile R20291]
Length = 309
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 97/310 (31%), Positives = 165/310 (53%), Gaps = 3/310 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT + AV LQ ++ + I+ V TQP +P G RG K +S V + A E ++P
Sbjct: 1 MKIVFMGTPDIAVPCLQKIIDEKYEILGVVTQPDKPKG-RGKKLGMSPVKELAIENNIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K +E ++ S N DV VVVA+G ++P+ IL KLG N H SLLP++RGAAP
Sbjct: 60 YQPVKARDKEFIDKIKSLNPDVIVVVAFGQILPKEILEIPKLGCINVHVSLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I I+ G+ +TG+ M MD+ LDTG + +V + NI L ++ + A + E
Sbjct: 120 INWVIINGEEKTGVTTMYMDEGLDTGDMILKTEVNLDENITAGELHDKMMNIGAETLKET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ N P Q +YA ++K ++F +SA +HN +R ++P+P A+
Sbjct: 180 LRLIEEGNAPREVQNHEEFSYAPIMNKSLGNIDFSKSAREIHNLVRGVNPWPSAYTIYND 239
Query: 242 GNKH-ERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ K+L+ + + G +V ++ + I +Q + + +G+++ G
Sbjct: 240 VIMKVWKTKVLDEKSTKDVGTIIDVSKDGIKVSTIDNVLLIEEIQMPNKKRMLVGEYIKG 299
Query: 301 CPVIIGCIVG 310
+ G ++G
Sbjct: 300 NTIETGLVLG 309
>gi|305674304|ref|YP_003865976.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|305412548|gb|ADM37667.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 317
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 96/315 (30%), Positives = 160/315 (50%), Gaps = 9/315 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT R+VFMGT +F+V L+ L+ + +V V TQP RP G R V ++A +
Sbjct: 1 MT-RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKG-RKKVLTPPPVKEEALRHGI 58
Query: 61 PALVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P K+ +E + + + D+ V A+G ++P+ +L++ K G N HASLLP RG
Sbjct: 59 PVLQPEKVRLKEEIEKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +I+ G +TG+ IM M + LD G + +V I N L +LSV A +
Sbjct: 119 APIHYSILQGKKKTGVTIMYMVEKLDAGDMISKVEVDIEETDNVGTLHDKLSVAGAKLLS 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + ++ Q E TYA I + + +++ R+ E ++N +R L+P+P A+ +
Sbjct: 179 ETVPNVIAGSISPEKQDEEKATYAPNIKREQELLDWSRTGEELYNQVRGLNPWPVAYTTL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLDIG 295
++ ++ + + +PG V+ +A A+ + LQ AG + +
Sbjct: 239 --NGQNLKVWASKKTPAPTKAEPGTVVAVEKEGIIVATGNDTALLLTELQPAGKKRMKGE 296
Query: 296 DFLLGCPVIIGCIVG 310
DF+ G V G +G
Sbjct: 297 DFVRGAHVEAGEKLG 311
>gi|16766696|ref|NP_462311.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|56415327|ref|YP_152402.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62181913|ref|YP_218330.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161616433|ref|YP_001590398.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167995182|ref|ZP_02576272.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168234464|ref|ZP_02659522.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168239760|ref|ZP_02664818.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168245234|ref|ZP_02670166.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|194442945|ref|YP_002042659.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194451913|ref|YP_002047432.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194471458|ref|ZP_03077442.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194736618|ref|YP_002116351.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197250647|ref|YP_002148328.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197262838|ref|ZP_03162912.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197364257|ref|YP_002143894.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|204931414|ref|ZP_03222083.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|224585202|ref|YP_002639001.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|21542048|sp|Q8ZLM6|FMT_SALTY RecName: Full=Methionyl-tRNA formyltransferase
gi|73919416|sp|Q57J63|FMT_SALCH RecName: Full=Methionyl-tRNA formyltransferase
gi|73919417|sp|Q5PIT7|FMT_SALPA RecName: Full=Methionyl-tRNA formyltransferase
gi|189044562|sp|A9N8B2|FMT_SALPB RecName: Full=Methionyl-tRNA formyltransferase
gi|238690059|sp|B5F7R4|FMT_SALA4 RecName: Full=Methionyl-tRNA formyltransferase
gi|238690673|sp|B4TJX8|FMT_SALHS RecName: Full=Methionyl-tRNA formyltransferase
gi|238690739|sp|B5BGV4|FMT_SALPK RecName: Full=Methionyl-tRNA formyltransferase
gi|238693519|sp|B4SUQ9|FMT_SALNS RecName: Full=Methionyl-tRNA formyltransferase
gi|238693719|sp|B4TXB1|FMT_SALSV RecName: Full=Methionyl-tRNA formyltransferase
gi|254789368|sp|C0PZV0|FMT_SALPC RecName: Full=Methionyl-tRNA formyltransferase
gi|16421963|gb|AAL22270.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56129584|gb|AAV79090.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62129546|gb|AAX67249.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161365797|gb|ABX69565.1| hypothetical protein SPAB_04248 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401608|gb|ACF61830.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194410217|gb|ACF70436.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194457822|gb|EDX46661.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194712120|gb|ACF91341.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197095734|emb|CAR61304.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197214350|gb|ACH51747.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197241093|gb|EDY23713.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197287580|gb|EDY26972.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|204319842|gb|EDZ05052.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205327099|gb|EDZ13863.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205331623|gb|EDZ18387.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205336018|gb|EDZ22782.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|224469730|gb|ACN47560.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|261248564|emb|CBG26402.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267995616|gb|ACY90501.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301159950|emb|CBW19469.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312914430|dbj|BAJ38404.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321226459|gb|EFX51509.1| Methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322615052|gb|EFY11976.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322617339|gb|EFY14240.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625561|gb|EFY22386.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626403|gb|EFY23212.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632085|gb|EFY28838.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635036|gb|EFY31759.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643263|gb|EFY39830.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646653|gb|EFY43160.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649999|gb|EFY46418.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322652716|gb|EFY49056.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322659527|gb|EFY55771.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322665531|gb|EFY61718.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322670425|gb|EFY66564.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322670498|gb|EFY66632.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675074|gb|EFY71157.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681611|gb|EFY77640.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322685955|gb|EFY81944.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322716399|gb|EFZ07970.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323131765|gb|ADX19195.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323195825|gb|EFZ80998.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323196419|gb|EFZ81570.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323202704|gb|EFZ87743.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323207309|gb|EFZ92259.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323211255|gb|EFZ96100.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323216036|gb|EGA00767.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323223473|gb|EGA07801.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323226797|gb|EGA10987.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323231841|gb|EGA15951.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233206|gb|EGA17301.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237273|gb|EGA21338.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323245508|gb|EGA29507.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249014|gb|EGA32936.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323250637|gb|EGA34518.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323256866|gb|EGA40580.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323263015|gb|EGA46562.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266015|gb|EGA49510.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323272772|gb|EGA56175.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|332990259|gb|AEF09242.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 315
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 181/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL++S H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E + ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQHLVADLHADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGSLYNKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +T+AEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTATPEAQNEALVTHAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEI- 241
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++E + PG ++ +A +G + ++ LQ AG + +
Sbjct: 242 ---DGQPVKVWQASVIEDATQSLPGTILAATKQGIQVATGKGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 299 DLLNSRREWFIPGNRL 314
>gi|225418639|ref|ZP_03761828.1| hypothetical protein CLOSTASPAR_05863 [Clostridium asparagiforme
DSM 15981]
gi|225041835|gb|EEG52081.1| hypothetical protein CLOSTASPAR_05863 [Clostridium asparagiforme
DSM 15981]
Length = 316
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 105/314 (33%), Positives = 167/314 (53%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT +F+V TL++LV + H + +V TQP +P G RG ++ V ++A E+ +P
Sbjct: 1 MRIIFMGTPDFSVPTLKSLVEAGHEVAAVVTQPDKPKG-RGKAVQMTPVKEQALEYGIPV 59
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E ADV VVVA+G +IP+ IL+ K G N HASLLP++RGAAP
Sbjct: 60 YQPLKVRDPAFVETVRQLAADVIVVVAFGQLIPKSILDMPKYGCVNIHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ E+GI M M + LDTG + V + L +LS+ ++
Sbjct: 120 IQWAVIDGERESGITTMMMAEGLDTGDMLEKTVVVLDEKETGGSLHDKLSLAGGKLILST 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ KLE +PQ G YA++++K V++ A ++ IR L+P+P A+
Sbjct: 180 LQKLENGTAVPTPQTGEGTCYAKRLTKELGDVDWSAPAVSIERLIRGLNPWPSAYT---- 235
Query: 242 GNKHERIKLLESQLVEG---EGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +KL + ++EG +PG+V+ + + G + + LQ G + +DI
Sbjct: 236 SWNGKTVKLWAADVLEGGEAAARPGQVVKSDKHSLLVQTGDGILSVRELQMEGKKRMDIE 295
Query: 296 DFLLGCPVIIGCIV 309
FL G PV G +
Sbjct: 296 SFLRGYPVPEGAVF 309
>gi|68249188|ref|YP_248300.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 86-028NP]
gi|81336406|sp|Q4QMV7|FMT_HAEI8 RecName: Full=Methionyl-tRNA formyltransferase
gi|68057387|gb|AAX87640.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 86-028NP]
gi|301169341|emb|CBW28940.1| 10-formyltetrahydrofolate:L-methionyl-tRNA (fMet )
N-formyltransferase [Haemophilus influenzae 10810]
Length = 318
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 112/318 (35%), Positives = 182/318 (57%), Gaps = 10/318 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQA+++S H++++VYTQ +PAG RG K S V + A++ +
Sbjct: 1 MKSLNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQSDKPAG-RGKKLQASPVKQLAEQNN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P L +EE + L DV VVVAYGL++P+ +L+A +LG N H S+LPRWRG
Sbjct: 60 IPVYQPKSLRKEEAQSELKALNADVMVVVAYGLILPKAVLDAPRLGCLNVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQR+I AGD +TG+ IM+MD+ LDTG + I + L +L+ L +
Sbjct: 120 AAPIQRSIWAGDVQTGVTIMQMDEGLDTGDMLHKVYCDILPTETSTSLYNKLAELAPSVL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ +D LE + Q + YAEK+SK E ++++ A + +IRA +P+P A+
Sbjct: 180 IDVLDNLENSKFIAEKQDGSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIAYFS 239
Query: 239 MMIGN-KHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + +K+ +++++ + KP G ++ IA G + +++LQ AG + +
Sbjct: 240 TEDKDGNAQTLKVYQAEVLPHQDKPAGTILSADKNGIQIATVDGVLNLLQLQPAGKKPMS 299
Query: 294 IGDFLLGCP--VIIGCIV 309
D L G IG ++
Sbjct: 300 AQDLLNGRAEWFTIGKVL 317
>gi|89074759|ref|ZP_01161217.1| methionyl-tRNA formyltransferase [Photobacterium sp. SKA34]
gi|89049523|gb|EAR55084.1| methionyl-tRNA formyltransferase [Photobacterium sp. SKA34]
Length = 314
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 113/316 (35%), Positives = 175/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT +FA L AL+SS H +V+VYTQP RPAG RG K S V A E +P
Sbjct: 4 PLRIVFAGTPDFAARHLAALLSSQHQVVAVYTQPDRPAG-RGKKLTSSPVKNIALEHDIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E ++ + AD+ VVVAYGL++PQ +L+ +LG N H S+LPRWRGAA
Sbjct: 63 VYQPASLRNEEAQQELAAIKADIMVVVAYGLLLPQEVLDTPRLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI + +A + ++L+ L A+++
Sbjct: 123 PIQRSIWAGDTETGVTIMQMDIGLDTGDMLKVATLPIEATDTSATMYEKLADLGPDALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + Q + YA+K+SK E +++ A + +RA +P+P ++ +
Sbjct: 183 CLSDIANSTAVAVKQDDELANYAKKLSKEEALIDWTMDAAAIERCVRAFNPWPMSYFTVA 242
Query: 241 IGNKHERIKLLESQLVEGE-GK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
N IK+ ++ + + GK PG ++ +A GA+R++ LQ G + +
Sbjct: 243 EQN----IKVWQATVEDDNQGKVPGTILSADKQGILVATGNGALRLLSLQPPGKKAMTAA 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 299 DLLNSRREWFESGAQL 314
>gi|320195379|gb|EFW70006.1| Methionyl-tRNA formyltransferase [Escherichia coli WV_060327]
Length = 315
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 181/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H+IV V+TQP RPAG RG K + S V A++ LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAG-RGKKLMPSPVKVLAEDKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLAIPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ + PG ++ +A G + ++ +Q AG + + +
Sbjct: 243 G----QPVKVWKASVIDTTTKAAPGTILEANKQGIQVATGDGILNLLSMQPAGKKAMSVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|40062662|gb|AAR37583.1| methionyl-tRNA formyltransferase [uncultured marine bacterium 313]
Length = 306
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 131/310 (42%), Positives = 194/310 (62%), Gaps = 6/310 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+L++VFMGT EF+V L++L+++ I+S+YTQPP+ + +RG K +S + K +++ +L
Sbjct: 1 MSLKIVFMGTPEFSVPALESLINNKFEILSIYTQPPKKS-KRGQKINISPIQKFSEKNNL 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P EEY S +ADVAVVVAYG +IP+ IL TKLGF N H SLLP+WRGA
Sbjct: 60 SVRNPENLNDGEEYNFIKSLSADVAVVVAYGKLIPKNILKTTKLGFINIHGSLLPKWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIM GD +TG++IMK+++ LD+GPV +++ + N +Q++LS++ + ++
Sbjct: 120 APIQRAIMNGDKKTGVSIMKIEEKLDSGPVLASKELALDQNATYGEIQKKLSLIGSDLLI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E++ +E+ QI TYA+KI K ET++N+ A V HI LSP PGAW E
Sbjct: 180 ESLKNIEKGKAKFIEQIHFNSTYAKKIDKNETKINWSLDANKVIAHIHGLSPDPGAWFEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
ER K+L + G PG +++ N TIAC +++I+ +QR G DFLL
Sbjct: 240 NA----ERFKVLRANKSTANGNPGTLLDENLTIACKSNSIQILEIQRQGKNKQTTKDFLL 295
Query: 300 GCPVIIGCIV 309
G + G I+
Sbjct: 296 GKKISKGSIL 305
>gi|288959245|ref|YP_003449586.1| methionyl-tRNA formyltransferase [Azospirillum sp. B510]
gi|288911553|dbj|BAI73042.1| methionyl-tRNA formyltransferase [Azospirillum sp. B510]
Length = 318
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 137/307 (44%), Positives = 187/307 (60%), Gaps = 5/307 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VFMGT +FAV +L AL+ + H +V VY+QPPRPAG RG + S VH+ A+E +P
Sbjct: 3 PLRLVFMGTPDFAVPSLAALIQAGHQVVRVYSQPPRPAG-RGQQVRKSPVHRFAEEHGIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E + + DVAVV AYGL++PQ IL A +LG N H SLLPRWRGAA
Sbjct: 62 VRTPKSLRNAEAQAEFADLKADVAVVAAYGLILPQPILEAPRLGCVNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I+AGD ETGI IM+MD LDTG + V I+ + L EL+ L A +V
Sbjct: 122 PIQRSILAGDAETGITIMQMDIGLDTGAMLSREAVAITPATTASSLHDELAALGARLIVP 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L L PQ E G+TYA K+++ + R+++ R A V +RAL+P+PG W
Sbjct: 182 ALAGLAAGTLTAEPQPEEGVTYAAKLTREDGRLDWTRPAAYVERQVRALTPWPGCWF--- 238
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
ERIK+L ++ G G PG +++ T+AC+ GAVR++ +QR G +D FL G
Sbjct: 239 DAANGERIKVLAAEPATGAGTPGTLLDERLTVACADGAVRLILVQRPGKAPVDGAAFLRG 298
Query: 301 CPVIIGC 307
+ +G
Sbjct: 299 FALAVGQ 305
>gi|300721397|ref|YP_003710668.1| 10-formyltetrahydrofolate:L-methionyl-tRNA (fMet)
N-formyltransferase [Xenorhabdus nematophila ATCC 19061]
gi|297627885|emb|CBJ88431.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Xenorhabdus nematophila ATCC 19061]
Length = 315
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 107/316 (33%), Positives = 172/316 (54%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL++S H +V V T+P +PAG RG K S+V A+E +P
Sbjct: 4 SLRIIFAGTPDFAARHLAALLNSQHHVVGVLTRPDKPAG-RGKKLTPSSVKVLAEEHGIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E + + AD+ +VVAYGL++PQ +L+ +LG N H SLLP WRGAA
Sbjct: 63 VFQPITLRAEESQQWVMEQQADIMIVVAYGLILPQTVLDIPRLGCLNIHGSLLPSWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + PI +A L ++L+ + A+++
Sbjct: 123 PIQRSVWAGDKETGVTIMQMDAGLDTGDMLLKTICPIEKEDTSASLYEKLANIGPTALLD 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + Q TYAEK+SK E ++++ A + IRA +P+P ++ +
Sbjct: 183 TLDLITSGICQPEAQDNALATYAEKLSKDEAKIDWNLPAIQLERCIRAFNPWPLSFFSI- 241
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +++++ + PG +I +A + G + I++LQ G + +
Sbjct: 242 ---DEQPIKIWQAEVISEQTTQAPGTIINADKKGIQVATTDGILNIIQLQPPGKKAMSAA 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 299 DLLNSRREWFTPGSKI 314
>gi|238913878|ref|ZP_04657715.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
Length = 315
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 181/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL++S H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E + ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQHLVADLHADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGSLYNKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +T+AEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTATPEAQNEALVTHAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEI- 241
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++E + PG ++ +A +G + ++ LQ AG + +
Sbjct: 242 ---DGQPVKVWQASVIEDATQSLPGTILAATKQGIQVATGKGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 299 DLLNSRKEWFIPGNRL 314
>gi|212709011|ref|ZP_03317139.1| hypothetical protein PROVALCAL_00043 [Providencia alcalifaciens DSM
30120]
gi|212688377|gb|EEB47905.1| hypothetical protein PROVALCAL_00043 [Providencia alcalifaciens DSM
30120]
Length = 315
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 110/307 (35%), Positives = 174/307 (56%), Gaps = 11/307 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT +FA L AL+ + H +V V T+ +PAG RG K S V A+E +P
Sbjct: 4 PLRIIFAGTPDFAAKHLAALLETKHQVVGVLTRHDKPAG-RGKKLTPSPVKILAEEHGIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
PT L + + +Q++ D+ +VVAYGL++PQ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPTTLREPDNQQWIKNQNADLMIVVAYGLILPQAVLDIPRLGCLNVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + PI+S +A L +L++ A++
Sbjct: 123 PIQRSIWAGDQETGVTIMQMDAGLDTGDMLYKATCPITSEDTSATLYDKLAITGPKALIH 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D L Q ++ YAEK+SK E R+++ +SA + IRA +P+P ++ +
Sbjct: 183 TVDLLSSGQCSPEKQDDSLANYAEKLSKDEARIDWQQSAVQIERCIRAFNPWPMSYFIV- 241
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + IK+ +++++ +PG +I ++A G + I +LQ G + +
Sbjct: 242 ---QEQLIKVWQAEVIAQGHNQRPGMIISADKKGISVATGNGILNITQLQPPGKKAMSAQ 298
Query: 296 DFLLGCP 302
D L
Sbjct: 299 DILNSRR 305
>gi|304392303|ref|ZP_07374244.1| methionyl-tRNA formyltransferase [Ahrensia sp. R2A130]
gi|303295407|gb|EFL89766.1| methionyl-tRNA formyltransferase [Ahrensia sp. R2A130]
Length = 312
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 149/311 (47%), Positives = 202/311 (64%), Gaps = 4/311 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT EF+V TLQAL + H IV+ Y+QPP+PAGRRG + VH A+ +P
Sbjct: 1 MRIIFMGTPEFSVPTLQALHDAGHQIVACYSQPPKPAGRRGRELTKQPVHLAAEALGIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G++E F + NADVAVVVAYGL++P+ +L+A K G NGH SLLPRWRGAAP
Sbjct: 61 HTPVSLKGEDEQTIFAAHNADVAVVVAYGLLLPKPVLDAPKHGCLNGHGSLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD E+GI +M M++ LDTGPVA +VPI L LS CA MV+A
Sbjct: 121 IQRAIMAGDAESGIQVMAMEEGLDTGPVAATARVPIGPRTTVGDLHDALSQECASLMVQA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L+ L +PQ+E+G+ YA+KI K E R+++ ++ V HI LSPFPGAW E+
Sbjct: 181 LADLKTGTLTFTPQLEDGVIYAKKIDKAEARIDWTKNGAEVAQHINGLSPFPGAWFEIEQ 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINP--NFTIACSQG-AVRIMRLQRAGGRVLDIGDFL 298
G K R+K L + G G+ GEV+N +F I+C AV+I R+Q+AGG+ ++ +FL
Sbjct: 241 GGKPMRVKALLAVETSGSGQTGEVLNNDSDFIISCGGSTAVQIERVQKAGGKPVNADEFL 300
Query: 299 LGCPVIIGCIV 309
G + IG +
Sbjct: 301 RGVDLPIGTTL 311
>gi|295091955|emb|CBK78062.1| methionyl-tRNA formyltransferase [Clostridium cf. saccharolyticum
K10]
Length = 312
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 105/314 (33%), Positives = 170/314 (54%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++V+MGT +FAV L ALV + H + +V TQP +P G RG +++ V +KA + +P
Sbjct: 1 MKLVYMGTPDFAVPPLTALVEAGHEVAAVVTQPDKPKG-RGKAVLMTPVKEKALSYGIPV 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ ++E N D VV A+G ++P+ IL K G N HASLLP++RGAA
Sbjct: 60 YQPARVKKDEEFLKTLREINPDAIVVAAFGQILPKEILELPKYGCVNIHASLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ G+ E+GI M MD LDTG + +P++ + L ++LS +++
Sbjct: 120 PIQWAVIDGEKESGITTMMMDVGLDTGDMLDRTVIPLAEDETGGSLFEKLSRAGGPLILK 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ LE + Q E G TYA + K +++ +SA + IR L+P+P A+
Sbjct: 180 TLEALENGTAVRTKQPEEGATYAGMLDKSLGNIDWTQSAAKIERLIRGLNPWPSAYTGYK 239
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +KL + +++G EG PGE+I F + GA+ + LQ G + +D
Sbjct: 240 G----KTMKLWAADVLKGTFEGVPGEIIKVEKERFLVRTGDGALAVKELQLEGKKRMDAA 295
Query: 296 DFLLGCPVIIGCIV 309
FL G + G I+
Sbjct: 296 SFLRGFSLEEGEIL 309
>gi|291484125|dbj|BAI85200.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. natto
BEST195]
Length = 317
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 100/317 (31%), Positives = 163/317 (51%), Gaps = 13/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT R+VFMGT +F+V L+ L+ + +V V TQP RP G R V ++A +
Sbjct: 1 MT-RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKG-RKKVMTPPPVKEEALRHGI 58
Query: 61 PALVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P K+ E + + + D+ V A+G ++P+ +L++ K G N HASLLP RG
Sbjct: 59 PVLQPEKVRLTEEIEKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +I+ G +TG+ IM M + LD G + +V I N L +LS A +
Sbjct: 119 APIHYSILQGKKKTGVTIMYMVEKLDAGDMISKVEVDIEETDNVGTLHDKLSAAGAKLLS 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + ++ Q E TYA I + + +++ R+ E ++N IR L+P+P A+ +
Sbjct: 179 ETVPNVIAGSISPEKQDEEKATYAPNIKREQELLDWSRTGEELYNQIRGLNPWPVAYTTL 238
Query: 240 MIGNKHERIKLLESQ--LVEGEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLD 293
N +K+ ES+ + +PG V+ +A + A+ + LQ AG + +
Sbjct: 239 NGQN----LKVWESKKTPAPTKAEPGTVVAVEKEGIIVATGNETALLLTELQPAGKKRMK 294
Query: 294 IGDFLLGCPVIIGCIVG 310
DF+ G V +G ++G
Sbjct: 295 GEDFVRGAHVEVGDVLG 311
>gi|309751782|gb|ADO81766.1| Methionyl-tRNA formyltransferase [Haemophilus influenzae R2866]
Length = 318
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 115/318 (36%), Positives = 185/318 (58%), Gaps = 10/318 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQA+++S H++++VYTQP +PAG RG K S V + A++ +
Sbjct: 1 MKSLNIIFSGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEQNN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P L +EE + L DV VVVAYGL++P+ +L+A +LG N H S+LPRWRG
Sbjct: 60 IPVYQPKSLRKEEAQSELKALNADVMVVVAYGLILPKAVLDAPRLGCLNVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQR+I AGD +TG+ IM+MD+ LDTG + I + L +L+ L A+
Sbjct: 120 AAPIQRSIWAGDVQTGVTIMQMDEGLDTGDMLHKVYCDILPTETSTSLYNKLAELAPSAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ +D LE Q ++ YAEK+SK E ++++ SA + +IRA +P+P A+
Sbjct: 180 IDVLDNLENGKFIAEKQDDSQSNYAEKLSKEEAQLDWSLSAMQLERNIRAFNPWPIAYFS 239
Query: 239 MMIGN-KHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + +K+ +++++ + KP G ++ IA G + +++LQ AG + +
Sbjct: 240 TEDKDGNAQTLKVYQAEVLPHQDKPAGTILSADKNGIQIATVDGVLNLLQLQPAGKKPMS 299
Query: 294 IGDFLLGCP--VIIGCIV 309
D L G IG ++
Sbjct: 300 AQDLLNGRAEWFTIGKVL 317
>gi|254463914|ref|ZP_05077325.1| methionyl-tRNA formyltransferase [Rhodobacterales bacterium Y4I]
gi|206684822|gb|EDZ45304.1| methionyl-tRNA formyltransferase [Rhodobacterales bacterium Y4I]
Length = 301
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 153/308 (49%), Positives = 192/308 (62%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT +F+V L ALV + H I +VY QPPRPAG RG K + VH +A L
Sbjct: 1 MRIIFMGTPDFSVPVLDALVEAGHQIAAVYCQPPRPAG-RGKKDRPTPVHARAAALGLDV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P EE F + NAD+AVVVAYGL++PQ IL+A + G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKDAEEQAAFAALNADIAVVVAYGLILPQAILDAPQHGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD ETGI IM+M+ LDTGPV I + T L LS + A +VEA
Sbjct: 120 IHRAIMAGDAETGICIMQMEAGLDTGPVLLREATAIGAEETTEQLHDRLSGMGAGLIVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L + + Q G+TYAEKI K E +V++ R A V IR LSPFPGAW E+
Sbjct: 180 LRRLPELAPEV--QPAEGVTYAEKIDKAEAQVDWSRQAAEVDRKIRGLSPFPGAWCEIEG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+R+KLL S+L EG+G PGEV++ TIAC GAV+++RLQRAG D FL G
Sbjct: 238 ----QRVKLLASRLAEGQGTPGEVLDDALTIACGNGAVQLLRLQRAGKSAQDPDVFLRGF 293
Query: 302 PVIIGCIV 309
PV G +
Sbjct: 294 PVPKGSRL 301
>gi|110637974|ref|YP_678181.1| methionyl-tRNA formyltransferase [Cytophaga hutchinsonii ATCC
33406]
gi|110280655|gb|ABG58841.1| methionyl-tRNA formyltransferase [Cytophaga hutchinsonii ATCC
33406]
Length = 302
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 158/308 (51%), Gaps = 11/308 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR+++MGT +FAV +L+ L+ + + +V T P +PAG RGLK SAV + A + ++
Sbjct: 1 MKLRIIYMGTPDFAVPSLEILIENGFDVAAVVTAPDKPAG-RGLKIQYSAVKEAALKHNI 59
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L P KL E + + L +V ++P+ I +G +N H SLLP+++GAA
Sbjct: 60 PVLQPEKLKDERFIEELISYNANLFIVVAFRMLPEIIWQMPSIGTFNLHGSLLPKYQGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ ETG + +DTG + K PI + + +L VL A +++
Sbjct: 120 PINWAIINGETETGCTTFFLKHQIDTGDIILQDKTPILPDDTFETVYNKLKVLGADLVLK 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +E +PQ +A KI K +++ S ++N IR L+PFP AW
Sbjct: 180 TVRMIESETYTSTPQKG-QAIHAPKIYKETGAIDWNNSCIAINNLIRGLNPFPSAWF--- 235
Query: 241 IGNKHERIKLLES--QLVEGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + K+ ++ ++ + G + + +AC+ G + ++ +Q G + + +
Sbjct: 236 -VHAEKTYKVFKAIPEVTQTNAAIGSIKSDNKTGIKVACADGWLSLIEIQAEGKKRMSVQ 294
Query: 296 DFLLGCPV 303
DFL G +
Sbjct: 295 DFLKGNKI 302
>gi|291619143|ref|YP_003521885.1| Fmt [Pantoea ananatis LMG 20103]
gi|291154173|gb|ADD78757.1| Fmt [Pantoea ananatis LMG 20103]
Length = 314
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 120/315 (38%), Positives = 178/315 (56%), Gaps = 12/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+++F GT +FA L AL++S H IV V+TQP RPAG RG K S V AQ ++P
Sbjct: 4 PLKIIFAGTPDFAARHLDALLASEHQIVGVFTQPDRPAG-RGNKLTASPVKSLAQAHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPQSLRPAENQQLVADLQADVMVVVAYGLILPKTVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD+ETG+ IM+MD LDTG + PIS+ +A L +L+ L ++
Sbjct: 123 PIQRALWAGDSETGVTIMQMDVGLDTGDMLLKLACPISAEDTSATLYDKLADLGPAGLMT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L N Q E+ YAEK+SK E R+N+ SAE + IRA +P+P ++ +
Sbjct: 183 TLSQLRDGNAQAVQQDESLANYAEKLSKEEARLNWTLSAEQLERCIRAFNPWPISFFMV- 241
Query: 241 IGNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ ++ ++ +PGE+I IA + G + +++LQ AG + + D
Sbjct: 242 ---NDQPVKVWQASVLPHVNKQPGEIIQADKHGIHIATADGVLNLLQLQPAGKKTMSAQD 298
Query: 297 FLLGCP--VIIGCIV 309
L G ++
Sbjct: 299 LLNSRREWFETGTLL 313
>gi|152976232|ref|YP_001375749.1| methionyl-tRNA formyltransferase [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|189044499|sp|A7GRJ6|FMT_BACCN RecName: Full=Methionyl-tRNA formyltransferase
gi|152024984|gb|ABS22754.1| methionyl-tRNA formyltransferase [Bacillus cytotoxicus NVH 391-98]
Length = 314
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 103/313 (32%), Positives = 163/313 (52%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + +V V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVG-RKKVMTPTPVKVEAEKHGIPV 60
Query: 63 LVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K+ +++ + + + D+ V A+G +IP+ IL A K G N HASLLP RG AP
Sbjct: 61 LQPLKIREQDEYEKVLALEPDLIVTAAFGQIIPKEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMQGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++N+ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLVQGKLEPIKQDEEKVTFAYNIKREQEKINWAKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E + +PG ++ F + ++I LQ AG + + F
Sbjct: 240 -GQVVKVWWGEKVPTANDAQPGTIVEIQEDGFIVVTGNETGIKITELQPAGKKRMSSSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G + IG +G
Sbjct: 299 LRGAKLEIGMKLG 311
>gi|145637961|ref|ZP_01793601.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittHH]
gi|145268852|gb|EDK08815.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittHH]
Length = 318
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 112/318 (35%), Positives = 182/318 (57%), Gaps = 10/318 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQA+++S H++++VYTQP +PAG RG K S V + A++ +
Sbjct: 1 MKSLNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEQNN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ P L +EE + L DV VVVAYGL++P+ +L+ +LG N H S+LPRWRG
Sbjct: 60 IRVYQPKSLRKEEAQSELKALNADVMVVVAYGLILPKAVLDVPRLGCLNVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQR+I AGD +TG+ IM+MD+ LDTG + I + L +L+ L A+
Sbjct: 120 AAPIQRSIWAGDVQTGVTIMQMDEGLDTGDMLHKVYCDILPTETSTSLYNKLAELAPSAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ +D LE + Q + YAEK+SK E ++++ A + +IRA +P+P A+
Sbjct: 180 IDVLDNLENSKFIAEKQDGSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIAYFS 239
Query: 239 MMIGN-KHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + +K+ +++++ + KP G ++ IA G + +++LQ AG + +
Sbjct: 240 TEDKDGNAQTLKVYQAEVLPHQDKPAGTILSADKNGIQIATVDGILNLLQLQPAGKKPMS 299
Query: 294 IGDFLLGCP--VIIGCIV 309
D L G IG ++
Sbjct: 300 AQDLLNGRAEWFAIGKVL 317
>gi|149201580|ref|ZP_01878554.1| methionyl-tRNA formyltransferase [Roseovarius sp. TM1035]
gi|149144628|gb|EDM32657.1| methionyl-tRNA formyltransferase [Roseovarius sp. TM1035]
Length = 302
Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats.
Identities = 150/309 (48%), Positives = 189/309 (61%), Gaps = 8/309 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT +F+V L+ALV++ H + +VY QPPRPAG RG K S V +A+ LP
Sbjct: 1 MRVIFMGTPDFSVPVLEALVAAGHEVAAVYCQPPRPAG-RGKKDRPSPVQARAEALGLPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P +F + A+VAVVVAYGL++PQ +L+A G N HASLLPRWRGAAP
Sbjct: 60 HHPVSLKEATAQAEFAALKAEVAVVVAYGLILPQAVLDAPTRGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD ETG+ IM+M+ LDTGPV V I T L LS L A +V A
Sbjct: 120 IHRAIMAGDTETGVCIMQMEAGLDTGPVLLREPVAIGPQETTGELHDRLSALGARLIVAA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+++L+ PQ E G+TYA KI K E RV++ R A V IR LSPFPGAW E+
Sbjct: 180 LERLDAL--TPEPQPEAGVTYAAKIDKSEARVDWTRPATEVDRLIRGLSPFPGAWCEVGG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ERIKLL S + E G PG V+ T+AC G+VR++RLQRAG D +FL G
Sbjct: 238 ----ERIKLLCSAMAEAHGAPGVVLADGLTVACGTGSVRLLRLQRAGRAAQDADEFLRGM 293
Query: 302 PVIIGCIVG 310
P+ G +G
Sbjct: 294 PLPRGTQLG 302
>gi|325662244|ref|ZP_08150859.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471496|gb|EGC74717.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
4_1_37FAA]
Length = 321
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 103/322 (31%), Positives = 167/322 (51%), Gaps = 15/322 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT EF+V TL+ALV + H +V TQP +P G RG + + V + A +P
Sbjct: 1 MRVIFMGTPEFSVGTLEALVEAGHEVVLAVTQPDKPKG-RGKEMQFTPVKEAAIRHQIPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ ++ + S+ ADV VV+A+G ++P+ IL T G N HASLLP++RGAAP
Sbjct: 60 YQPVKVREKACVEVLKSYEADVIVVIAFGQILPKSILELTPYGCINVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ +G+ M+MD+ LDTG + ++V + L +L+ A VE
Sbjct: 120 IQWAVIDGEKVSGVTTMQMDEGLDTGDMILKKEVILDEKETGGSLHDKLAEAGAALCVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +LE+ P Q E YA+ ++K +++ + AE + IR L+P+P A+
Sbjct: 180 LKRLEEGTAPAEKQGETTTDYAKMLTKQMGEIDWKQPAEKIERLIRGLNPWPSAYTYWNQ 239
Query: 242 GNKHERIKLLESQLV----------EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAG 288
+ E+ +PG + F++ +G + ++ LQ G
Sbjct: 240 KVMKIWLADTEADESGEKEKMASEEAKHPEPGTITAVAKDRFSVQTGEGLLTVLELQIPG 299
Query: 289 GRVLDIGDFLLGCPVIIGCIVG 310
+ +D G FL G + G I+G
Sbjct: 300 KKRMDAGAFLRGYQIKEGEILG 321
>gi|145631965|ref|ZP_01787718.1| methionyl-tRNA formyltransferase [Haemophilus influenzae R3021]
gi|144982379|gb|EDJ89956.1| methionyl-tRNA formyltransferase [Haemophilus influenzae R3021]
Length = 318
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 112/318 (35%), Positives = 183/318 (57%), Gaps = 10/318 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQA+++S H++++VYTQP +PAG RG K S V + A++ +
Sbjct: 1 MKSLNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEQNN 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ P +E + + N DV VVVAYGL++P+ +L+A +LG N H S+LPRWRG
Sbjct: 60 ISVYQPKSLRKEEAQTELKALNVDVMVVVAYGLILPKAVLDAPRLGCLNVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQR+I AGD +TG+ IM+MD+ LDTG + I + L +L+ L A+
Sbjct: 120 AAPIQRSIWAGDAQTGVTIMQMDEGLDTGDMLHKVYCDILPTETSTSLYNKLAELAPSAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ +D LE Q ++ YAEK+SK E ++++ SA + +IRA +P+P A+
Sbjct: 180 IDVLDNLESGKFISEKQDDSQSNYAEKLSKEEAQLDWSLSAMQLERNIRAFNPWPIAYFS 239
Query: 239 MMIGN-KHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + +K+ +++++ + KP G ++ IA G + +++LQ AG + +
Sbjct: 240 TEDKDGNAQTLKVYQAEVLPHQDKPAGTILSADKNGIQIATVDGVLNLLQLQPAGKKPMS 299
Query: 294 IGDFLLGCP--VIIGCIV 309
D L G IG ++
Sbjct: 300 AQDLLNGRAEWFTIGKVL 317
>gi|289627008|ref|ZP_06459962.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. aesculi
str. NCPPB3681]
gi|289647927|ref|ZP_06479270.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. aesculi
str. 2250]
gi|330867900|gb|EGH02609.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 314
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 124/315 (39%), Positives = 182/315 (57%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+ F GT EFA L+AL+ S + IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIFFAGTPEFAAEHLKALLDSPYQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P L + + L+ D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VMQPPTLRAPDAQAELAALKPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PI++ L L+ L A+++
Sbjct: 123 PIQRAVQAGDAESGVTVMQMEAGLDTGPMLLKAVTPITAQDTGGTLHDRLAELGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L +L Q ++ YA K++K E R+++ R A+ + IRA +P+P +
Sbjct: 183 AIAGLADGSLVGEVQDDSLANYAHKLNKDEARLDWTRPADELERLIRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PG V+ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 242 ---NEETLKVLAADLAEGQGVPGTVLSASKDGLIVACGQNALRLTRLQLPGGKPLNFADL 298
Query: 298 LLGCP--VIIGCIVG 310
IG ++G
Sbjct: 299 FNSRREKFAIGTVLG 313
>gi|260914693|ref|ZP_05921159.1| methionyl-tRNA formyltransferase [Pasteurella dagmatis ATCC 43325]
gi|260631292|gb|EEX49477.1| methionyl-tRNA formyltransferase [Pasteurella dagmatis ATCC 43325]
Length = 317
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 116/318 (36%), Positives = 182/318 (57%), Gaps = 10/318 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L+V+F GT EFA LQ L++S H +++VYTQP +PAG RG K S V + A+++
Sbjct: 1 MKSLKVIFAGTPEFAAQHLQVLLNSHHEVIAVYTQPDKPAG-RGKKLQASPVKQLAEQYQ 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P ++ E + ADV VVVAYGL++P+ +L +LG N H SLLPRWRG
Sbjct: 60 IPVYQPKSLRKEDAQETLRALQADVMVVVAYGLILPKAVLEIPRLGCLNVHGSLLPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQRAI AGD +TGI IM+MD+ LDTG + I+S+ + L +L + +A+
Sbjct: 120 AAPIQRAIWAGDEQTGITIMQMDEGLDTGDMLHKVYCDIASDETSTSLYAKLMEIAPNAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ +D L++ Q + YAEK+SK E ++++ A + IRA +P+P ++L
Sbjct: 180 IDVLDDLDEGKYIAEKQDDLLSNYAEKLSKEEAKLDWKLPAVQLERCIRAFNPWPISYLT 239
Query: 239 MMI-GNKHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
++ + +K+ ++ ++ KP G ++ IA G + I+ LQ A + +
Sbjct: 240 LLDSKGTEQILKIYKATVLPHINKPVGTILSVTKEGIQIATIDGVLNILELQPASKKPMS 299
Query: 294 IGDFLLGCP--VIIGCIV 309
+ DFL G +G I+
Sbjct: 300 VQDFLNGRTDWFSVGKII 317
>gi|254487523|ref|ZP_05100728.1| methionyl-tRNA formyltransferase [Roseobacter sp. GAI101]
gi|214044392|gb|EEB85030.1| methionyl-tRNA formyltransferase [Roseobacter sp. GAI101]
Length = 304
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 150/309 (48%), Positives = 189/309 (61%), Gaps = 8/309 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT EF+V L ALV + H +V VY QPPRPAG RG K S V +A+ LP
Sbjct: 1 MRVIFMGTPEFSVPVLDALVLAGHEVVCVYCQPPRPAG-RGKKDRASPVQSRAEALGLPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E +F + AD+AVVVAYGL++PQ +L+A G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKTAEAQAEFAALEADIAVVVAYGLILPQAVLDAPAHGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD ETG+ IM+M+ LDTGPV PI ++ T L LS + A +VEA
Sbjct: 120 IHRAIMAGDAETGVCIMQMEAGLDTGPVLLREATPIRTSETTIQLHDRLSEIGARLIVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L PQ E+G+TYA KI K E R+++ R A V IR LSPFPGAW E
Sbjct: 180 LSRLPDL--TPEPQPEDGVTYATKIDKAEARIDWTRPAAEVDRLIRGLSPFPGAWFETGG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
RIK+L S L EG G PGEV++ +AC +GA+++ RLQRAG D+ F G
Sbjct: 238 T----RIKVLGSTLAEGSGAPGEVLDAGLRVACGEGAMQLTRLQRAGKAAQDVSVFQQGA 293
Query: 302 PVIIGCIVG 310
+ G I+G
Sbjct: 294 QIAPGTILG 302
>gi|188996795|ref|YP_001931046.1| methionyl-tRNA formyltransferase [Sulfurihydrogenibium sp. YO3AOP1]
gi|229487568|sp|B2V969|FMT_SULSY RecName: Full=Methionyl-tRNA formyltransferase
gi|188931862|gb|ACD66492.1| methionyl-tRNA formyltransferase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 311
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 109/315 (34%), Positives = 176/315 (55%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FAV +L+AL+ S+H +V V TQP +P G RG K + V ++A + ++P
Sbjct: 1 MKVLFWGTPDFAVKSLKALIESNHQVVGVITQPDKPRG-RGQKIQPTPVKEEALKHNIPV 59
Query: 63 LVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ + N D++VVVAYG ++P+ I+N K N HASLLP +RGAA
Sbjct: 60 FQPEKIKNNQEILETIKKLNPDISVVVAYGKILPEEIINIPKYKTINVHASLLPEYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAIM G ++TG+ IM++ K LD G V R+V I+ + + L +L+ A +++
Sbjct: 120 PIQRAIMEGKDKTGVCIMEIIKELDAGDVYACREVEITEDDDIISLHDKLAEEGARLLIK 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+DK+E+ + PQ TYA+ I K E +++F RSA+ + N IRAL +P A+ +
Sbjct: 180 VLDKIEKGEIDKKPQDHEKATYAKPIEKSEGKIDFSRSAKEIFNQIRALKVWPKAYAKFR 239
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
E +K+L++++VE PGE+I + G + + +Q + +
Sbjct: 240 D----EEVKILDAKIVECNLNALPGEIIKADEKEGIVVKTGDGCLLLKIIQFPNSKPITT 295
Query: 295 GDFLLGCPVIIGCIV 309
D + G + G
Sbjct: 296 QDAIRGYKIKAGERF 310
>gi|320547879|ref|ZP_08042162.1| methionyl-tRNA formyltransferase [Streptococcus equinus ATCC 9812]
gi|320447419|gb|EFW88179.1| methionyl-tRNA formyltransferase [Streptococcus equinus ATCC 9812]
Length = 311
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 96/316 (30%), Positives = 164/316 (51%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ +++ +++V TQP R G R + ++ V + A
Sbjct: 1 MT-KIIFMGTPDFSATVLKGLLNDANYEVLAVVTQPDRAVG-RKKEIKMTPVKEVALAHD 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P K+ E L +V A L + N HASLLP++RG
Sbjct: 59 LPVYQPEKMSGSEEMAELMTLGADGIVTAAFGQFLPTKLLDSVDFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ GD E G+ IM+M K +D G + PI+ + N + ++L+V+ ++
Sbjct: 119 APIHYAIINGDKEAGVTIMEMVKKMDAGDMIAKASTPITDDDNVGTMFEKLAVIGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + N+ PQ E T++ I+ + R+++ +SA +V NHIR L P+P ++ +
Sbjct: 179 KTLPDYIAGNIKPEPQDEEAATFSPNITPEQERIDWNKSARDVFNHIRGLYPWPVSYTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E+ L EG+GKPGE+I +A GA+ + +Q +G + + D
Sbjct: 239 ----DGKRFKIYEAVLAEGQGKPGEIIEKGKKSLVVATGDGAISLKTVQPSGKPRMSVVD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G ++G
Sbjct: 295 FLNGVGRKLEVGDLIG 310
>gi|312958119|ref|ZP_07772642.1| Methionyl-tRNA formyltransferase [Pseudomonas fluorescens WH6]
gi|311287550|gb|EFQ66108.1| Methionyl-tRNA formyltransferase [Pseudomonas fluorescens WH6]
Length = 317
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 122/315 (38%), Positives = 183/315 (58%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL++S + IV+VYTQP RPAG RG K + S V + A E ++P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLASPYDIVAVYTQPDRPAG-RGQKLMPSPVKQLALEHNIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P E + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VLQPPTLRNAEAQAELAALKPDLLVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD+E+G+ +M+M+ LDTGP+ PI++ L L+ + A++
Sbjct: 123 PIQRAVEAGDSESGVTVMRMEAGLDTGPMLLKVITPITAEDTGGSLHDRLAEMGPPAVIR 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L L Q ++ TYA K++K E R+++ R A + +RA +P+P +
Sbjct: 183 AIAGLAAGTLEGEVQDDSLATYAHKLNKDEARLDWSRPAVELERLVRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L +G+G PGE+I ++AC + A+ + RLQ GG+ L+ D
Sbjct: 242 ---NGEALKVLAATLTDGKGAPGEIIGASKDGLSVACGEQALCLTRLQLPGGKALNFSDL 298
Query: 298 LLGCP--VIIGCIVG 310
+G ++G
Sbjct: 299 FNSRREKFALGTVLG 313
>gi|168468036|ref|ZP_02701873.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|200388391|ref|ZP_03215003.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|195628883|gb|EDX48293.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|199605489|gb|EDZ04034.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
Length = 315
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 182/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL++S H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLHADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGSLYNKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +T+AEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTATPEAQNEALVTHAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEI- 241
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++E + PG ++ +A +G + ++ LQ AG + +
Sbjct: 242 ---DGQPVKVWQASVIEDATQSLPGTILAATKQGIQVATGKGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 299 DLLNSRREWFIPGNRL 314
>gi|268593573|ref|ZP_06127794.1| methionyl-tRNA formyltransferase [Providencia rettgeri DSM 1131]
gi|291310850|gb|EFE51303.1| methionyl-tRNA formyltransferase [Providencia rettgeri DSM 1131]
Length = 315
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 110/307 (35%), Positives = 170/307 (55%), Gaps = 11/307 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+++F GT +FA L AL+ + H IV V T+ +PAG RG K S V A+E +P
Sbjct: 4 PLKIIFAGTPDFAAKHLAALLDTRHQIVGVLTRHDKPAG-RGKKLTPSPVKVLAEEHQIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E +Q++ D+ +VVAYGL++PQ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLKDSENQQWIKNQNADLMIVVAYGLILPQAVLDIPRLGCLNVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + PI+ + +A L +L+++ A++
Sbjct: 123 PIQRSIWAGDTETGVTIMQMDAGLDTGDMLYKAICPINPSDTSASLYDKLAIIGPEALIH 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L Q ++ YAEK+SK E R+N+ A ++ IRA +P+P ++ +
Sbjct: 183 TVEMLSSGQCTAEKQDDSLANYAEKLSKEEARINWQDDAVHIERCIRAFNPWPMSYFMVE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
IK+ +++ +E + +PG +I IA G + I +LQ G + +
Sbjct: 243 EQL----IKVWQAEALEEAHDKQPGTIISADKKGICIATGNGILNITQLQPPGKKAMSAQ 298
Query: 296 DFLLGCP 302
D L
Sbjct: 299 DILNSRR 305
>gi|251788003|ref|YP_003002724.1| methionyl-tRNA formyltransferase [Dickeya zeae Ech1591]
gi|247536624|gb|ACT05245.1| methionyl-tRNA formyltransferase [Dickeya zeae Ech1591]
Length = 313
Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats.
Identities = 118/317 (37%), Positives = 178/317 (56%), Gaps = 13/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K S V A++ +L
Sbjct: 1 MSLRIIFAGTPDFAAQHLAALLSSEHEIVGVFTQPDRPAG-RGNKLTPSPVKMLAEQHNL 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P E + +ADV VVVAYGL++PQ +L+ +LG N H SLLPRWRGA
Sbjct: 60 PVFQPKSLRPSESQQLVAELSADVMVVVAYGLILPQAVLDMPRLGCINVHGSLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRA+ AGD TGI IM+MD LDTG + + PI + +A L +L+ L ++
Sbjct: 120 APIQRALWAGDRLTGITIMQMDAGLDTGAMLHKIECPILPDDTSATLYDKLANLGPQGLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L + + Q ++ TYAEK+SK E R+++ SAE + IRA +P+P ++ +
Sbjct: 180 HTLTQLSASQVTAVAQDDSLATYAEKLSKEEARLDWRLSAEQLERCIRAFNPWPVSYFMV 239
Query: 240 MIGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +K+ ++++++ + PG V+ +A + G + I LQ +G + +
Sbjct: 240 EE----QPVKVWKAEVLDISHQQLPGTVLAADKEGIQVATTDGVLNIQILQPSGKKAMSA 295
Query: 295 GDFLLGCP--VIIGCIV 309
D L G +
Sbjct: 296 QDLLNSRREWFTPGSTL 312
>gi|296447193|ref|ZP_06889123.1| methionyl-tRNA formyltransferase [Methylosinus trichosporium OB3b]
gi|296255252|gb|EFH02349.1| methionyl-tRNA formyltransferase [Methylosinus trichosporium OB3b]
Length = 308
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 141/308 (45%), Positives = 203/308 (65%), Gaps = 2/308 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT +FA L+ +V+ H +V+VYT+ P PAG RG+ S VH+ A+ S+P
Sbjct: 1 MRVVFMGTPDFAAPLLEKIVADGHEVVAVYTRAPAPAG-RGMGLKPSPVHRLAESLSIPV 59
Query: 63 LVPTKLGQEEYEQ-FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P EE + F + +ADVAVV AYGL++PQ L+A +LG N H SLLPRWRGAAP
Sbjct: 60 FTPKNFRGEETLRLFAAHDADVAVVAAYGLILPQAALDAPRLGCLNLHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+MAGD+E+G+ +MKM+ LDTGPVA +VPI +++ L L++ A M EA
Sbjct: 120 IQRAVMAGDSESGVMVMKMEAGLDTGPVAATARVPIGPDMSCGELHDALAMAGAELMTEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ L +PQ + G+TYA+KI K E R+++ A +H+ +R LSPFPGA+ E +
Sbjct: 180 LRDLERGALVFTPQPDQGVTYAQKIDKNEGRIDWRLPARALHDLVRGLSPFPGAFFESDL 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
G+ ER+K+L +++ EG+G PGE ++ IAC +GA+R++ +QR G + I FL G
Sbjct: 240 GHGVERVKVLRTKIEEGKGAPGEALDDRGLIACGEGALRLVEVQRGGKAPMPIEAFLRGR 299
Query: 302 PVIIGCIV 309
P+ G +
Sbjct: 300 PLPRGQAL 307
>gi|307132807|ref|YP_003884823.1| methionyl-tRNA formyltransferase [Dickeya dadantii 3937]
gi|306530336|gb|ADN00267.1| Methionyl-tRNA formyltransferase [Dickeya dadantii 3937]
Length = 313
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 118/317 (37%), Positives = 178/317 (56%), Gaps = 13/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+LR++F GT +FA L L+SS H +V V+TQP RPAG RG K S V A++ ++
Sbjct: 1 MSLRIIFAGTPDFAAQHLAGLLSSEHEVVGVFTQPDRPAG-RGNKLTPSPVKALAEQHAI 59
Query: 61 PALVPTKLGQEEYEQ-FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P L E +Q ADV VVVAYGL++PQ +L+ +LG N H SLLPRWRGA
Sbjct: 60 PVFQPKSLRPVENQQLVAELGADVMVVVAYGLILPQAVLDMPRLGCINVHGSLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRA+ AGD +TGI IM+MD LDTG + + PI + +A L +L+ L ++
Sbjct: 120 APIQRALWAGDTQTGITIMQMDAGLDTGAMLHKIECPILPDDTSATLYDKLAKLGPQGLM 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + +L + Q ++ TYAEK+SK E R+++ SA+ + IRA +P+P ++ +
Sbjct: 180 ETLAQLSASQATAEAQDDSLATYAEKLSKEEARLDWQLSAKQLERCIRAFNPWPVSYFLI 239
Query: 240 MIGNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +K+ +++ + +PG ++ IA + G + I LQ +G + +
Sbjct: 240 EE----QPVKVWKAEALNTSHQQQPGTILAADKDGIRIATADGVLNIQILQPSGKKSMSA 295
Query: 295 GDFLLGCP--VIIGCIV 309
D L G I+
Sbjct: 296 QDLLNSRREWFTPGQIL 312
>gi|332085436|gb|EGI90602.1| methionyl-tRNA formyltransferase [Shigella boydii 5216-82]
Length = 315
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 178/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H++V V+TQP RPAG RG K + S + A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPIKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLKMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E ITYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLITYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ G ++ +A G + ++ LQ AG + +
Sbjct: 243 G----QPVKVWKASVIDTATNAALGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|90019669|ref|YP_525496.1| methionyl-tRNA formyltransferase [Saccharophagus degradans 2-40]
gi|89949269|gb|ABD79284.1| methionyl-tRNA formyltransferase [Saccharophagus degradans 2-40]
Length = 322
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 121/305 (39%), Positives = 167/305 (54%), Gaps = 6/305 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+L +VF GT EFA L+AL+ S H+IV+ YTQP RP G RG K S V AQ +P
Sbjct: 6 SLNIVFAGTPEFAARHLEALLQSPHNIVAAYTQPDRPKG-RGKKLTASPVKDVAQAAGVP 64
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P EE + L+ D+ VVVAYGL++PQ +L+ LG N H SLLPRWRGAA
Sbjct: 65 VYQPINFKSEEDQAALAALKPDIMVVVAYGLLLPQVVLDTPTLGCINVHGSLLPRWRGAA 124
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR I AGD ETGI IM+MD LDTG + I ++ A L +L+ + A++
Sbjct: 125 PIQRCIEAGDTETGITIMQMDAGLDTGDMLLKTVCDIKADETAATLHDKLAEMGPPALLS 184
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L + Q + TYA K+ K E +N+ A +H IRA +PFP E+
Sbjct: 185 ALHMLASDTAEPEAQDNSLATYAHKLLKPEAAINWQIDASEIHRRIRAFNPFPICNSELQ 244
Query: 241 IGN-KHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + +K+ ++QL G+G PG ++ +AC G++ I LQ G + +D
Sbjct: 245 PADAEPMVVKIYQAQLANGKGAPGAILNANKAGIEVACGSGSIVITSLQLPGKKPMDAAS 304
Query: 297 FLLGC 301
FL G
Sbjct: 305 FLNGF 309
>gi|332289286|ref|YP_004420138.1| methionyl-tRNA formyltransferase [Gallibacterium anatis UMN179]
gi|330432182|gb|AEC17241.1| methionyl-tRNA formyltransferase [Gallibacterium anatis UMN179]
Length = 318
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 123/316 (38%), Positives = 185/316 (58%), Gaps = 9/316 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL++S H +++VYTQP +PAG RG K SAV + A +LP
Sbjct: 3 PLNIIFAGTPDFAAQHLQALLASQHQVIAVYTQPDKPAG-RGKKLQPSAVKQLALAHNLP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +EE +Q L+ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 62 IFQPKSLRKEEAQQQLAQLNADVMVVVAYGLILPKAVLAMPRLGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD +TG+ IM+MD+ LDTG + IS + ++ L Q+L+ L A++E
Sbjct: 122 PIQRAIWAGDEQTGVTIMQMDEGLDTGDMLHKVSCEISKDETSSSLYQKLATLAPQALIE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D LE+ P Q YAEK+SK E ++++ A + IRA +P+P +WL+
Sbjct: 182 VLDHLEEGKYPPQAQQNEFSNYAEKLSKEEAKLDWSLPAVQLERCIRAFNPWPISWLQTR 241
Query: 241 I-GNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++ +K+ ++ ++ + + G V+ IA + G + I +LQ AG + + +
Sbjct: 242 DAQGNNQILKVYQATVLPHQNQTAGTVLQANKQGIQIATADGVLNITQLQPAGKKPMAVQ 301
Query: 296 DFLLGCP--VIIGCIV 309
DFL G +G +
Sbjct: 302 DFLNGRSDWFEVGKQL 317
>gi|291563556|emb|CBL42372.1| methionyl-tRNA formyltransferase [butyrate-producing bacterium
SS3/4]
Length = 308
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 102/313 (32%), Positives = 172/313 (54%), Gaps = 10/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV TL AL+ H +V+V TQP +P G RG +++ V +KA E+ +P
Sbjct: 1 MRIVFMGTPDFAVPTLTALIEGGHEVVAVVTQPDKPKG-RGKAVLMTPVKEKAIEYEIPV 59
Query: 63 LVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ E+ + L D VVVA+G ++P+ IL+ K G N HASLLP++RGAAP
Sbjct: 60 YQPVKVRDPEFVELLKTMAPDAIVVVAFGQILPKSILDLPKYGCVNVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ E+G+ M MD LDTG + + +P+ L +LS L ++
Sbjct: 120 IQWAVIDGEKESGVTTMMMDVGLDTGDMLEQKAIPLDEKETGGSLFDKLSALGGSMILST 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE + +PQ E+G +YA+ ++K +++ + A ++ +R L+P+P A+
Sbjct: 180 LKGLENGTITRTPQGESGTSYAKMLTKEMGHIDWTKDAVSIERLVRGLNPWPSAYTSYAG 239
Query: 242 GNKHERIKLLESQLVEGEGK--PGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +K+ +++ + G+ PG++ + +G + + LQ G + +D F
Sbjct: 240 ----KTMKIWAAEVADLPGERAPGKIHVTKDRLFVETGEGVLDVKELQLEGKKRMDTASF 295
Query: 298 LLGCPVIIGCIVG 310
L G + G G
Sbjct: 296 LRGFQMEDGSFCG 308
>gi|16272566|ref|NP_438783.1| methionyl-tRNA formyltransferase [Haemophilus influenzae Rd KW20]
gi|260581532|ref|ZP_05849339.1| methionyl-tRNA formyltransferase [Haemophilus influenzae RdAW]
gi|1169712|sp|P44787|FMT_HAEIN RecName: Full=Methionyl-tRNA formyltransferase
gi|1573619|gb|AAC22283.1| methionyl-tRNA formyltransferase (fmt) [Haemophilus influenzae Rd
KW20]
gi|260091806|gb|EEW75762.1| methionyl-tRNA formyltransferase [Haemophilus influenzae RdAW]
Length = 318
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 116/318 (36%), Positives = 183/318 (57%), Gaps = 10/318 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQA+++S H++++VYTQP +PAG RG K S V + A++ +
Sbjct: 1 MKSLNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEQNN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P L +EE + L DV VVVAYGL++P+ +L+A +LG N H S+LPRWRG
Sbjct: 60 IPVYQPKSLRKEEAQSELKALNADVMVVVAYGLILPKAVLDAPRLGCLNVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQR+I AGD +TG+ IM+MD+ LDTG + I + L +L+ L A+
Sbjct: 120 AAPIQRSIWAGDVQTGVTIMQMDEGLDTGDMLHKVYCDILPTETSTSLYNKLAELAPSAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ +D LE Q + YAEK+SK E ++N+ SA + +IRA +P+P A+
Sbjct: 180 IDVLDNLENGKFIAEKQDGSQSNYAEKLSKEEAQLNWSLSAMQLERNIRAFNPWPIAYFS 239
Query: 239 MMIGN-KHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ +K+ +++++ + KP G ++ IA G + +++LQ AG + +
Sbjct: 240 TEDKDGNAHTLKVYQAKVLPHQDKPAGTILSADKNGIQIATVDGVLNLLQLQSAGKKPMS 299
Query: 294 IGDFLLGCP--VIIGCIV 309
D L G IG ++
Sbjct: 300 AQDLLNGRAEWFTIGKVL 317
>gi|316940692|gb|ADU74726.1| methionyl-tRNA formyltransferase [Clostridium thermocellum DSM
1313]
Length = 325
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 99/316 (31%), Positives = 162/316 (51%), Gaps = 12/316 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VFMGT EFA+ +L+ LV + + +V TQP +P G RG K+ + V + A + ++
Sbjct: 14 ALRIVFMGTPEFAIPSLEMLVREGYEVAAVVTQPDKPKG-RGKKTAMPPVKEFAIKNNIE 72
Query: 62 ALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P E D+ V AYG ++PQ +L+ G N H SLLP++RGAA
Sbjct: 73 VLQPSKVKTPEFVSTIRELRPDLLVTAAYGKILPQEVLDIPPYGCVNVHGSLLPKYRGAA 132
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ TGI M D +DTG + ++ IS ++ L +L+ L A + E
Sbjct: 133 PINWAIINGEKVTGITTMYTDAGMDTGDMLLKAEIEISDDMTAGELHDKLACLGAEVLRE 192
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ K+E + L PQ TYA + K +N+ +SA +VHN +R +P+P A+
Sbjct: 193 TLKKIEDSTLQRIPQPHEQATYAPMLDKTVGCINWSKSARDVHNLVRGTNPWPVAFTYYK 252
Query: 241 IGNKHERIKLLESQLVE---GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+++K+ + +++ PG ++ +AC G V I +Q R + +
Sbjct: 253 G----QKMKVWVTSVLDEENHNFTPGTILKVGKDGLVVACGVGKVVIKEVQFDSSRRMTV 308
Query: 295 GDFLLGCPVIIGCIVG 310
+++ G V G ++G
Sbjct: 309 EEYICGHKVGEGEVLG 324
>gi|325261898|ref|ZP_08128636.1| methionyl-tRNA formyltransferase [Clostridium sp. D5]
gi|324033352|gb|EGB94629.1| methionyl-tRNA formyltransferase [Clostridium sp. D5]
Length = 322
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 104/317 (32%), Positives = 166/317 (52%), Gaps = 14/317 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+RV+FMGT +FAV TL+AL+ + H + TQP +P G RG + + V + A++ +P
Sbjct: 7 KMRVIFMGTPDFAVGTLEALIQAGHDVCLAVTQPDKPKG-RGKEMQFTPVKEAAEKHGIP 65
Query: 62 ALVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ Q E L + ADV VVVA+G ++P+ IL+ T G N HASLLP++RGAA
Sbjct: 66 VYQPVKVRQPECVAELRGYKADVIVVVAFGQILPKEILDMTPYGCINVHASLLPKYRGAA 125
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ +I+ G+ TG+ M+MD+ LDTG + +V I+ L +L+ A VE
Sbjct: 126 PIQWSILCGEEVTGVTTMQMDEGLDTGDMILKSEVLITEEETGESLHDKLAAAGAALCVE 185
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ LE Q E+ YA+ + K +++ + A + +R L+ +P A+
Sbjct: 186 TLEALEDGTAVFEHQGESPTPYAKMLHKKMGNIDWSQPAVQIERLVRGLNSWPSAYT--- 242
Query: 241 IGNKHERIKLLESQLVEGE-----GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+ +K+ ++ V E PG V+ FT+ +G +RI LQ G + +
Sbjct: 243 -HWGDKVLKIWRAKAVPQEEKACTAAPGTVLEVGKDCFTVQTGEGILRISELQIPGKKRM 301
Query: 293 DIGDFLLGCPVIIGCIV 309
+ FL G + G +
Sbjct: 302 ETSAFLRGYTLETGTLF 318
>gi|238916654|ref|YP_002930171.1| methionyl-tRNA formyltransferase [Eubacterium eligens ATCC 27750]
gi|259646031|sp|C4Z520|FMT_EUBE2 RecName: Full=Methionyl-tRNA formyltransferase
gi|238872014|gb|ACR71724.1| methionyl-tRNA formyltransferase [Eubacterium eligens ATCC 27750]
Length = 315
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 110/319 (34%), Positives = 179/319 (56%), Gaps = 16/319 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT +FAV TL+A++ + H + +V TQP +P G R V S V +A +
Sbjct: 1 MRVVFMGTPDFAVGTLKAIIEAGHDVAAVVTQPDKPRG-RSKSLVFSPVKDEAVAHGITV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + E + + ++NADV VVVA+G ++P I+N + G N HASLLP++RGA+P
Sbjct: 60 LQPERARDEAFVEELRTYNADVIVVVAFGQLLPASIINMPRYGCINVHASLLPKYRGASP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G +G+ MKMD+ LDTG + + KV + + L LS + AH +V+
Sbjct: 120 IQWAVIDGCEYSGVTTMKMDEGLDTGDILMVEKVKLDAKETGGSLFDRLSDVGAHLLVKT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ LE + Q ++ TY + + K +++F +SA + IR L+P+P A+ +
Sbjct: 180 LEGLEAGTITPVKQDDSESTYVKMLHKSFGKMDFNKSAAELERLIRGLNPWPSAFTYI-- 237
Query: 242 GNKHERIKLLESQLVEG-------EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRV 291
+ +K+ ++ + + E KPG+V+ FTIAC QG + + +Q G +
Sbjct: 238 --DGKMLKIWDADVADNISEVQTEEVKPGQVVTVGKNTFTIACGQGYLVVNEVQLEGKKR 295
Query: 292 LDIGDFLLGCPVIIGCIVG 310
+D G FL G + G ++G
Sbjct: 296 MDSGSFLRGNQLEAGVMLG 314
>gi|110643526|ref|YP_671256.1| methionyl-tRNA formyltransferase [Escherichia coli 536]
gi|191174466|ref|ZP_03035967.1| methionyl-tRNA formyltransferase [Escherichia coli F11]
gi|300973967|ref|ZP_07172374.1| methionyl-tRNA formyltransferase [Escherichia coli MS 200-1]
gi|123343556|sp|Q0TCH4|FMT_ECOL5 RecName: Full=Methionyl-tRNA formyltransferase
gi|110345118|gb|ABG71355.1| methionyl-tRNA formyltransferase [Escherichia coli 536]
gi|190905274|gb|EDV64912.1| methionyl-tRNA formyltransferase [Escherichia coli F11]
gi|300308977|gb|EFJ63497.1| methionyl-tRNA formyltransferase [Escherichia coli MS 200-1]
gi|324014964|gb|EGB84183.1| methionyl-tRNA formyltransferase [Escherichia coli MS 60-1]
Length = 315
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 182/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H+IV V+TQP RPAG RG K + S V +A++ LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNIVGVFTQPDRPAG-RGKKLMPSPVKVQAEDKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ + PG ++ +A G + ++ +Q AG + + +
Sbjct: 243 G----QPVKVWKASVIDTTTKAAPGTILEANKQGIQVATGDGILNLLSMQPAGKKAMSVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNRL 314
>gi|125973087|ref|YP_001036997.1| methionyl-tRNA formyltransferase [Clostridium thermocellum ATCC
27405]
gi|166214890|sp|A3DCX5|FMT_CLOTH RecName: Full=Methionyl-tRNA formyltransferase
gi|125713312|gb|ABN51804.1| methionyl-tRNA formyltransferase [Clostridium thermocellum ATCC
27405]
Length = 311
Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats.
Identities = 98/315 (31%), Positives = 162/315 (51%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT EFA+ +L+ LV + + +V TQP +P G RG K+ + V + A + ++
Sbjct: 1 MRIVFMGTPEFAIPSLEMLVRERYEVAAVVTQPDKPKG-RGKKTAMPPVKEFAIKNNIEV 59
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P E D+ V AYG ++PQ +L+ G N H SLLP++RGAAP
Sbjct: 60 LQPSKVKTPEFVSTIRELRPDLLVTAAYGKILPQEVLDIPPYGCVNVHGSLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ TGI M D +DTG + ++ IS ++ L +L+ L A + E
Sbjct: 120 INWAIINGEKVTGITTMYTDAGMDTGDMLLKAEIEISDDMTAGELHDKLACLGAEVLRET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ K+E + L PQ TYA + K +N+ +SA +VHN +R +P+P A+
Sbjct: 180 LKKIEDSTLQRIPQPHEQATYAPMLDKTVGCINWSKSARDVHNLVRGTNPWPVAFTYYKG 239
Query: 242 GNKHERIKLLESQLVE---GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+++K+ + +++ PG ++ +AC G V I +Q R + +
Sbjct: 240 ----QKMKVWVTSVLDEENHNFTPGTILKVGKDGLVVACGVGKVVIKEVQFDSSRRMTVE 295
Query: 296 DFLLGCPVIIGCIVG 310
+++ G V G ++G
Sbjct: 296 EYICGHKVGEGEVLG 310
>gi|237806928|ref|YP_002891368.1| methionyl-tRNA formyltransferase [Tolumonas auensis DSM 9187]
gi|259647285|sp|C4L7Y3|FMT_TOLAT RecName: Full=Methionyl-tRNA formyltransferase
gi|237499189|gb|ACQ91782.1| methionyl-tRNA formyltransferase [Tolumonas auensis DSM 9187]
Length = 314
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 116/303 (38%), Positives = 171/303 (56%), Gaps = 11/303 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VF GT +FA LQAL++++ +V+VYTQP RPAG RG K S V A E ++P
Sbjct: 4 LRIVFAGTPDFAAKHLQALLNANLQVVAVYTQPDRPAG-RGNKLTPSPVKILAVEHNIPV 62
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E +Q L+ D+ VVVAYGL++PQ++L+ +LG N H SLLP WRGAAP
Sbjct: 63 FQPENFKSAEAQQELAALKPDLMVVVAYGLLLPQQVLDTPRLGCINVHGSLLPGWRGAAP 122
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETGI IM+MD LDTG + PI+ +A L ++L++ M+
Sbjct: 123 IQRAIWAGDPETGITIMQMDAGLDTGDMLHKMVCPITPEDTSASLYEKLAIDGPEGMLFT 182
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ Q TYA+K+SK E +N+ + A + IRA +P+P ++ ++
Sbjct: 183 IQQIADGTAKPEKQNNELATYAKKLSKEEACINWQQDAAFIERCIRAFNPWPVSYFKLAD 242
Query: 242 GNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
N IK+ +++++ + PG +I IA G +RI +LQ G + + D
Sbjct: 243 LN----IKVWKAEVLPNTAQQSPGMIIQASKAGLDIATGNGMLRIKQLQLPGKKAMSFAD 298
Query: 297 FLL 299
L
Sbjct: 299 VLN 301
>gi|153815687|ref|ZP_01968355.1| hypothetical protein RUMTOR_01923 [Ruminococcus torques ATCC 27756]
gi|317501926|ref|ZP_07960110.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
8_1_57FAA]
gi|331088260|ref|ZP_08337179.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
3_1_46FAA]
gi|145846928|gb|EDK23846.1| hypothetical protein RUMTOR_01923 [Ruminococcus torques ATCC 27756]
gi|316896606|gb|EFV18693.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
8_1_57FAA]
gi|330408504|gb|EGG87970.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
3_1_46FAA]
Length = 330
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 103/333 (30%), Positives = 170/333 (51%), Gaps = 30/333 (9%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT +F+V TL+ALV + H + TQP +P G RG + + V + A + +
Sbjct: 1 MRIIFMGTPDFSVGTLEALVEAGHDVCLAVTQPDKPKG-RGKEMQFTPVKEAAVKHGILV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ E + +NADV VVVA+G ++P+ IL T G N HASLLP++RGAAP
Sbjct: 60 YQPKRVRDPECVEELRKYNADVMVVVAFGQILPKEILEMTPYGCINVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ AI+ G++ TG+ M+MD+ LDTG + ++PI+ + L +L+ A V+
Sbjct: 120 IQWAIIEGESVTGVTTMQMDEGLDTGDMILKTEIPIAEDETGESLHDKLAEAGAALCVKT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E Q E+ YA+ ++K +++ +SA + +R L+ +P A+
Sbjct: 180 LHAIENKTAVFEKQPESPTAYAKMLTKDLGNIDWAKSAVQIERLVRGLNSWPSAYT---- 235
Query: 242 GNKHERIKLLES------------------QLVEGEGK---PGEVI---NPNFTIACSQG 277
+ +K+ ++ + GK PG V+ +F I G
Sbjct: 236 HRDGKVMKIWKALAKPQEECAEQTELGSEEHTAQKTGKNAMPGTVVSVAKDSFCIQTGDG 295
Query: 278 AVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+RI+ +Q G + +D G FL G V G + G
Sbjct: 296 VLRILEVQMPGKKRMDTGSFLRGYKVEEGMVFG 328
>gi|229587595|ref|YP_002869714.1| methionyl-tRNA formyltransferase [Pseudomonas fluorescens SBW25]
gi|259646046|sp|C3KE47|FMT_PSEFS RecName: Full=Methionyl-tRNA formyltransferase
gi|229359461|emb|CAY46302.1| methionyl-tRNA formyltransferase [Pseudomonas fluorescens SBW25]
Length = 317
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 125/315 (39%), Positives = 183/315 (58%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL++S H +V+VYTQP RPAG RG K + S V + A E ++P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLTSPHDVVAVYTQPDRPAG-RGQKLMPSPVKQLALEHNIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P E + + N D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VLQPPTLRNAEAQAELAALNPDLLVVVAYGLILPQAVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD+E+G+ +M+M+ LDTGP+ PI++ L L+ L A+++
Sbjct: 123 PIQRAVEAGDSESGVTVMRMEAGLDTGPMLLKVTTPITAADTGGSLHDRLAELGPPAVIQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L L Q ++ TYA K++K E R+++ R A + +RA +P+P +
Sbjct: 183 AIAGLAAGTLEGEVQDDSLATYAHKLNKDEARIDWSRPAVELERLVRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG G PGE+I +AC + A+ + RLQ GG+ L+ D
Sbjct: 242 ---NGEALKVLAATLAEGAGAPGEIIGASKDGLLVACGEQALCLTRLQLPGGKALNFSDL 298
Query: 298 LLGCP--VIIGCIVG 310
+G ++G
Sbjct: 299 FNSRREKFALGTVLG 313
>gi|207858649|ref|YP_002245300.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|238690439|sp|B5R1E4|FMT_SALEP RecName: Full=Methionyl-tRNA formyltransferase
gi|206710452|emb|CAR34810.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
Length = 315
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 182/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL++S H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLHADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGSLYNKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +T+AEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAAPEAQNEALVTHAEKLSKEEARIDWSLSAVQLERCIRAFNPWPMSWLEI- 241
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++E + PG ++ +A +G + ++ LQ AG + +
Sbjct: 242 ---DGQPVKVWQASVIEDATQSLPGTILAATKQGIQVATGKGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 299 DLLNSRREWFIPGNRL 314
>gi|154247232|ref|YP_001418190.1| methionyl-tRNA formyltransferase [Xanthobacter autotrophicus Py2]
gi|154161317|gb|ABS68533.1| methionyl-tRNA formyltransferase [Xanthobacter autotrophicus Py2]
Length = 307
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 147/308 (47%), Positives = 194/308 (62%), Gaps = 3/308 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV TL +V H +V+VYT+ P PAGRRGL S VH+ A+ F L
Sbjct: 1 MRIVFMGTPDFAVPTLSEIVGRGHEVVAVYTRAPAPAGRRGLDLTPSPVHQVAERFGLKV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P E +F + +ADVAVVVAYGL++P IL A +LG N H SLLPRWRGAAP
Sbjct: 61 LTPKSLRTPEAAAEFAAHDADVAVVVAYGLILPLAILEAPRLGCLNLHGSLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD TG+ +M+M++ LDTGPV + ++PI ++ L + VL A M A
Sbjct: 121 IQRAIMAGDQATGVCVMQMEQGLDTGPVGLVERIPIGPDMTAGDLHDRMMVLGADLMARA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ L + Q E G+ YA KI K ETR+++ + A+ VH+ IR LSPFPGAW +
Sbjct: 181 LAALERGGLAFTAQPEAGVAYAAKIEKAETRIDWSQPAQVVHDRIRGLSPFPGAWFPLGP 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
R+K+L S L EG G PG+V++ TIAC GAVR++ LQ+AG + FL G
Sbjct: 241 DET--RVKVLRSTLAEGAGPPGDVLDDRLTIACGSGAVRLVELQKAGKQPAGASSFLNGN 298
Query: 302 PVIIGCIV 309
V G +
Sbjct: 299 AVPPGTRL 306
>gi|291526148|emb|CBK91735.1| methionyl-tRNA formyltransferase [Eubacterium rectale DSM 17629]
gi|291527118|emb|CBK92704.1| methionyl-tRNA formyltransferase [Eubacterium rectale M104/1]
Length = 310
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 98/313 (31%), Positives = 166/313 (53%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT +F+V TL+A++ + H + V TQP +P G RG + V + A +
Sbjct: 1 MRVIFMGTPDFSVGTLEAIIEAGHEVALVVTQPDKPKG-RGKTMQYTPVKECALSHGIEV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ + ++ FNAD+ +VVA+G ++ + IL+ + G N HASLLP++RGAAP
Sbjct: 60 FQPVKIRETANIEYLRKFNADIIIVVAFGQILSKSILDMPRYGCINVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ GD TG+ M+MD+ +DTG + V ++ + L +LS A VE
Sbjct: 120 IQWAVINGDEFTGVTTMRMDEGVDTGDMIAKSTVRLAPDETGGSLFDKLSAEGARLCVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
M +E +PQ T+ ISK +++ + A + IR L+P+P A+ +
Sbjct: 180 MKMIEDGTAEYTPQNSEEATHTSMISKELGFIDWTKPAVEIERLIRGLNPWPSAYTHL-- 237
Query: 242 GNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ K+ +++++G +PG + + + +GA+ ++ +Q G + +D G
Sbjct: 238 --NGKTFKVWSAKVIDGSDDYEPGCIYHIGKNDMYVQTGKGALSLVEVQLQGKKRMDTGS 295
Query: 297 FLLGCPVIIGCIV 309
FL GC V G
Sbjct: 296 FLRGCHVEEGSFF 308
>gi|198245996|ref|YP_002217371.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|238690318|sp|B5FJI3|FMT_SALDC RecName: Full=Methionyl-tRNA formyltransferase
gi|197940512|gb|ACH77845.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|326625152|gb|EGE31497.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
Length = 315
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 182/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL++S H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLHADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGSLYNKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +T+AEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAAPEAQNEALVTHAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEI- 241
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++E + PG ++ +A +G + ++ LQ AG + +
Sbjct: 242 ---DGQPVKVWQASVIEDATQSLPGTILAATKQGIQVATGKGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 299 DLLNSRREWFIPGNRL 314
>gi|160939812|ref|ZP_02087159.1| hypothetical protein CLOBOL_04703 [Clostridium bolteae ATCC
BAA-613]
gi|158437246|gb|EDP15011.1| hypothetical protein CLOBOL_04703 [Clostridium bolteae ATCC
BAA-613]
Length = 328
Score = 193 bits (490), Expect = 3e-47, Method: Composition-based stats.
Identities = 103/327 (31%), Positives = 168/327 (51%), Gaps = 25/327 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +F+V L+ALV + H +++V TQP +P G RG + ++ V +A E+ +P
Sbjct: 1 MRIVFMGTPDFSVPALKALVEAGHQVIAVVTQPDKPKG-RGKEVQMTPVKIQAMEYGIPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ + + + L AD VV+A+G ++P+ +L K G N HASLLP++RGAAP
Sbjct: 60 YQPAKVREASFVEVLKGLEADAYVVIAFGQILPKAVLELPKYGCINIHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ ++ G+ ETGI M MD LDTG + +PI L +LS+ ++
Sbjct: 120 IQWCVIDGERETGITTMMMDVGLDTGDMLEKAVIPIEEKETGGSLHDKLSMAGGDLILST 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ KLE+ L +PQ + G YA+ ++K +++ + A ++ IR L+P+P A+
Sbjct: 180 LKKLEEGTLVRTPQTDEGTCYAKMLTKSLGDIDWNQGAVSIERLIRGLNPWPSAYT---- 235
Query: 242 GNKHERIKLLESQLVEGEG----------------KPGEVI---NPNFTIACSQGAVRIM 282
+ IK+ + ++ G PG V+ + G + I
Sbjct: 236 MWNGKTIKIWAADVIAGREAAEFLSESGVPAETGTAPGTVVCSDKRGLVVCTGGGLLSIR 295
Query: 283 RLQRAGGRVLDIGDFLLGCPVIIGCIV 309
LQ G + +D FL G P+ G +
Sbjct: 296 ELQMEGKKRMDTPAFLRGYPIPAGDMF 322
>gi|114568997|ref|YP_755677.1| methionyl-tRNA formyltransferase [Maricaulis maris MCS10]
gi|114339459|gb|ABI64739.1| methionyl-tRNA formyltransferase [Maricaulis maris MCS10]
Length = 311
Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 133/312 (42%), Positives = 182/312 (58%), Gaps = 5/312 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MTLR+ FMGT +FA +L + ++ H +V V+TQPPR G RG + VH+ A+ +
Sbjct: 1 MTLRLAFMGTPDFAARSLAEIAAAGHEVVHVFTQPPRRRG-RGQSEQKTPVHQLAEVLGI 59
Query: 61 PALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P + + D+A VVAYG ++PQ L A ++G N HASLLPRWRGA
Sbjct: 60 PVSTPASFRDPDVIAHFASLDLDLAAVVAYGQILPQAALYAPRMGCLNLHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD TG+ + +M+ LDTGP+ V I + A L L A
Sbjct: 120 APIQRAIMAGDTMTGVQLQQMEAGLDTGPILLSETVRIKDSDTAASLHDRLMEAGALMWP 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
A+ LE+ +L Q +G+TYA KIS E R+++ RSAE + NH+R LSPFPGAW EM
Sbjct: 180 RALAALERGSLEAVSQSSDGVTYARKISSDEARIDWSRSAEELSNHVRGLSPFPGAWFEM 239
Query: 240 MIGNKHERIKLLESQLVEGEGK--PGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R+K+L ++ V GE PG VI T+AC +GA+R++RLQR G +D F
Sbjct: 240 PGEKRPVRVKVLLAEPVSGEAAAGPGTVI-EGLTVACGEGALRLVRLQREGKGAMDAATF 298
Query: 298 LLGCPVIIGCIV 309
L G + G ++
Sbjct: 299 LNGNSLPAGTVL 310
>gi|227824653|ref|ZP_03989485.1| methionyl-tRNA formyltransferase [Acidaminococcus sp. D21]
gi|226905152|gb|EEH91070.1| methionyl-tRNA formyltransferase [Acidaminococcus sp. D21]
Length = 312
Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 109/315 (34%), Positives = 177/315 (56%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VFMGT EFA ++L+ALV H I++V TQP RP G RG K ++SAV + A +LP
Sbjct: 1 MKLVFMGTPEFAASSLRALVKQQKHEILAVVTQPDRPKG-RGHKLMMSAVKEYALAVNLP 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P ++ + + + + D+ VV A+G +P+ +L+ G N HASLLP +RGAA
Sbjct: 60 VLQPERVKDPAFMEEMKRLSPDLIVVAAFGQFLPKALLDLPPFGCINVHASLLPAYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ + G+ IM+MD +DTG + VPI + L EL A +++
Sbjct: 120 PIHYAILKGEKKAGVTIMQMDTGMDTGAMLEKVSVPIGPEMTQGELHDELKEKGAALLLQ 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D L + PQ E TYA I++ +++ SA+ +HN IRA +P+PG + +
Sbjct: 180 TIDDLSAGTVTAEPQEETKATYASLITRDMEHLDWTLSADTLHNQIRAFNPWPGTYTILP 239
Query: 241 IGNKHERIKLLESQLVEGEGK---PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
G +R+K+ +S ++ G + PG+++ + F IAC G + ++ Q G R +
Sbjct: 240 DG---KRLKVWKSHVLPGSAEQAQPGQILEADSKGFHIACGTGVLAVLECQPEGKRAMAA 296
Query: 295 GDFLLGCPVIIGCIV 309
F+ G + +G I+
Sbjct: 297 QSFVNGQQIAVGEIL 311
>gi|78484537|ref|YP_390462.1| methionyl-tRNA formyltransferase [Thiomicrospira crunogena XCL-2]
gi|123755297|sp|Q31J85|FMT_THICR RecName: Full=Methionyl-tRNA formyltransferase
gi|78362823|gb|ABB40788.1| methionyl-tRNA formyltransferase [Thiomicrospira crunogena XCL-2]
Length = 312
Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 118/313 (37%), Positives = 171/313 (54%), Gaps = 8/313 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT +F+V L+ L+ S H +V+VYTQP RPAG RG K S V + A E +P
Sbjct: 4 PLRIIFAGTPDFSVPPLKTLIDSEHEVVAVYTQPDRPAG-RGRKLTASPVKQTALEHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E + L DV +VVAYGL++P+ +L+ K G N HAS+LPRWRGAA
Sbjct: 63 VYQPVSLKTPEAQAELEALQADVMIVVAYGLILPKAVLDMPKYGCLNIHASILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI GD ETG+ IM+MD LDTG + + K PI L LS L AM+
Sbjct: 123 PIQRAIQMGDAETGVTIMQMDVGLDTGDMLTILKTPIKPEDTAQTLHDRLSALGCDAMMT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L+ + L Q E +TYAEK++K E +++ SA+ + ++A +P+P A+ +
Sbjct: 183 TLSNLQTDQLSPVKQDERQVTYAEKLNKAEAELDWQASAQTLARQVQAFNPWPVAFTQY- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ RI E + PG VI +A +G++ I ++Q +G + + DF
Sbjct: 242 -QGQPLRIWQAEVGHASTQKSPGLVISVSKTGMEVATGKGSLLIKQVQPSGKKAMPAYDF 300
Query: 298 LLGCPVIIGCIVG 310
+ G +G
Sbjct: 301 AQARQLT-GQTLG 312
>gi|148826744|ref|YP_001291497.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittEE]
gi|166214899|sp|A5UEB3|FMT_HAEIE RecName: Full=Methionyl-tRNA formyltransferase
gi|148716904|gb|ABQ99114.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittEE]
Length = 318
Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 114/318 (35%), Positives = 184/318 (57%), Gaps = 10/318 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQA+++S H++++VYTQP +PAG RG K S V + A++
Sbjct: 1 MKSLNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEQND 59
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P L +EE + L DV VVVAYGL++P+ +L+A +LG N H S+LPRWRG
Sbjct: 60 IPVYQPKSLRKEEVQSELKALNADVIVVVAYGLILPKVVLDAPRLGCLNVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQR+I AGD +TG+ IM+MD+ LDTG + I + L +L+ L A+
Sbjct: 120 AAPIQRSIWAGDAQTGVTIMQMDEGLDTGDMLHKVYCDILPTETSTSLYNKLAELAPSAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ +D LE Q ++ YAEK+SK E ++++ A + +IRA +P+P A+
Sbjct: 180 IDVLDNLESGKFTAEKQDDSQSNYAEKLSKEEAQLDWSLPAVQLERNIRAFNPWPIAYFS 239
Query: 239 MMIGN-KHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + +K+ +++++ + KP G ++ IA G + +++LQ AG +++
Sbjct: 240 TEDRDGNAQTLKVYQAEVLPHQDKPAGTILSADKNGIQIATVDGVLNLLQLQPAGKKLMS 299
Query: 294 IGDFLLGCP--VIIGCIV 309
D L G IG ++
Sbjct: 300 AQDLLNGRAEWFAIGKVL 317
>gi|16078636|ref|NP_389455.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221309448|ref|ZP_03591295.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221313773|ref|ZP_03595578.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221318697|ref|ZP_03599991.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221322968|ref|ZP_03604262.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. SMY]
gi|6166189|sp|P94463|FMT_BACSU RecName: Full=Methionyl-tRNA formyltransferase
gi|2337802|emb|CAA74263.1| putative Fmt protein [Bacillus subtilis subsp. subtilis str. 168]
gi|2633945|emb|CAB13446.1| methionyl-tRNA formyltransferase [Bacillus subtilis subsp. subtilis
str. 168]
Length = 317
Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 101/317 (31%), Positives = 162/317 (51%), Gaps = 13/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT R+VFMGT +F+V L+ L+ + +V V TQP RP G R V ++A +
Sbjct: 1 MT-RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKG-RKKVLTPPPVKEEALRHGI 58
Query: 61 PALVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P K+ E + + + D+ V A+G ++P+ +L++ K G N HASLLP RG
Sbjct: 59 PVLQPEKVRLTEEIEKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +I+ G +TGI IM M + LD G + +V I N L +LSV A +
Sbjct: 119 APIHYSILQGKKKTGITIMYMVEKLDAGDMISKVEVDIEETDNVGTLHDKLSVAGAKLLS 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + ++ Q E TYA I + + +++ R+ E ++N IR L+P+P A+ +
Sbjct: 179 ETVPNVIAGSISPEKQDEEKATYAPNIKREQELLDWSRTGEELYNQIRGLNPWPVAYTTL 238
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLD 293
N +K+ S+ + +PG V+ +A + A+ + LQ AG + +
Sbjct: 239 NGQN----LKIWASKKIAAPTTAEPGTVVAVEKEGIIVATGNETALLLTELQPAGKKRMK 294
Query: 294 IGDFLLGCPVIIGCIVG 310
DF+ G V G ++G
Sbjct: 295 GEDFVRGAHVEAGDVLG 311
>gi|304316975|ref|YP_003852120.1| methionyl-tRNA formyltransferase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778477|gb|ADL69036.1| methionyl-tRNA formyltransferase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 311
Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 108/311 (34%), Positives = 172/311 (55%), Gaps = 7/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT EFAV +L+ L+ S H+++ V TQP +P G RG K S V + A + ++
Sbjct: 1 MNIVFMGTPEFAVPSLEKLIESGHNVMLVITQPDKPKG-RGKKISYSPVKECAIKNNIEV 59
Query: 63 LVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K +E +++ N D+ VV AYG ++P+ IL + G N HASLLP++RGAA
Sbjct: 60 FQPPKLKNNKEIFDKLSQLNPDLIVVAAYGKILPEEILQIPRYGCINVHASLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ ETGI IM M+K LDTG + +PI N+ + +L+VL +A+++
Sbjct: 120 PINWAIINGEKETGITIMYMEKGLDTGDILLQMSIPILEEDNSETIHDKLAVLGGNALID 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++K+ L Q ++ TYA + K +N+ + A + N +R L P+P A+
Sbjct: 180 AINKMVDGALMPVKQDDSKATYAPILEKSIGLINWQKDAVEIKNLVRGLRPWPVAYTYYK 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN--FTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+I E EG+ KPG VI + C + A++I+ +Q G R + + ++L
Sbjct: 240 --GNMLKIWAAEVYSYEGKEKPGTVIYAGNTLVVKCGKDALKILEIQSEGTRRMTVEEYL 297
Query: 299 LGCPVIIGCIV 309
G + G +
Sbjct: 298 RGHIIGKGEQL 308
>gi|238924697|ref|YP_002938213.1| methionyl-tRNA formyltransferase [Eubacterium rectale ATCC 33656]
gi|259646032|sp|C4ZEV8|FMT_EUBR3 RecName: Full=Methionyl-tRNA formyltransferase
gi|238876372|gb|ACR76079.1| methionyl-tRNA formyltransferase [Eubacterium rectale ATCC 33656]
Length = 310
Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 98/313 (31%), Positives = 166/313 (53%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT +F+V TL+A++ + H + V TQP +P G RG + V + A +
Sbjct: 1 MRVIFMGTPDFSVGTLEAIIEAGHEVALVVTQPDKPKG-RGKTMQYTPVKECALSHGIEV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ + ++ FNAD+ +VVA+G ++ + IL+ + G N HASLLP++RGAAP
Sbjct: 60 FQPVKIRETANIEYLRKFNADIIIVVAFGQILSKSILDMPRYGCINVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ GD TG+ M+MD+ +DTG + V ++ + L +LS A VE
Sbjct: 120 IQWAVINGDEFTGVTTMRMDEGVDTGDMIAKSTVRLAPDETGGSLFDKLSAEGAKLCVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
M +E +PQ T+ ISK +++ + A + IR L+P+P A+ +
Sbjct: 180 MKMIEDGTAEYTPQNSEEATHTSMISKELGFIDWTKPAVEIERLIRGLNPWPSAYTHL-- 237
Query: 242 GNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ K+ +++++G +PG + + + +GA+ ++ +Q G + +D G
Sbjct: 238 --NGKTFKVWSAKVIDGSDDYEPGCIYHIGKNDMYVQTGKGALSLVEVQLQGKKRMDTGS 295
Query: 297 FLLGCPVIIGCIV 309
FL GC V G
Sbjct: 296 FLRGCHVEEGSFF 308
>gi|288904706|ref|YP_003429927.1| methionyl-tRNA formyltransferase [Streptococcus gallolyticus UCN34]
gi|288731431|emb|CBI12983.1| methionyl-tRNA formyltransferase [Streptococcus gallolyticus UCN34]
Length = 311
Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 100/316 (31%), Positives = 165/316 (52%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ A L+ L+ S++ +++V TQP R G R + ++ V + A +
Sbjct: 1 MT-KLIFMGTPDFSAAVLKGLLDDSNYDVLAVVTQPDRAVG-RKKEIKMTPVKEVALAHN 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P K+ E L +V A L + N HASLLP++RG
Sbjct: 59 LPVYQPEKMSGSEEMAELMTLGADGIVTAAFGQFLPTKLLDSVDFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G+ E G+ IM+M K +D G + PI+ + N + ++L+V+ ++
Sbjct: 119 APIHYAIINGEEEAGVTIMEMVKKMDAGDMIAKASTPITDDDNVGTMFEKLAVIGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + N+ PQ E+ T++ I+ + R+++ +SA +V NHIR L P+P A +
Sbjct: 179 KTLPDYIAGNIKPEPQDESKATFSPNITPEQERIDWNKSARDVFNHIRGLYPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E+ L EG GKPGE+I +A GA+ + +Q AG + I D
Sbjct: 239 ----DGKRFKIYEATLAEGHGKPGEIIEKGKKSLVVATGDGAISLKTVQLAGKPRMSIVD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G ++G
Sbjct: 295 FLNGVGRKLEVGDLIG 310
>gi|293391666|ref|ZP_06636000.1| methionyl-tRNA formyltransferase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290952200|gb|EFE02319.1| methionyl-tRNA formyltransferase [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 318
Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 119/306 (38%), Positives = 178/306 (58%), Gaps = 7/306 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL++SSH++++VYTQP +PAG RG K S V + A++ +P
Sbjct: 3 PLNIIFAGTPDFAARHLQALLNSSHNVIAVYTQPDKPAG-RGKKLQSSPVKQLAEQHQIP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E + + ADV VVVAYGL++PQ +L+A K G N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKAETQAELTALQADVMVVVAYGLILPQVVLDAPKYGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD +TG+ IM+MD LDTG + I+ +AGL +L+ + A+VE
Sbjct: 122 PIQRAIWAGDAQTGVTIMQMDAGLDTGDMLHKVYCDITPQETSAGLYAKLAEVAPAALVE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D L Q + +YAEK+SK E ++N+ SA + +IRA +P+P A+LE+
Sbjct: 182 VLDHLTDGTFTAERQDDAQSSYAEKLSKEEAKLNWQLSAAQLERNIRAFNPWPIAYLELT 241
Query: 241 I-GNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++ K PG ++ IA G + +++LQ +G + +
Sbjct: 242 DGAGNPQTLKVYQATVLPHTNKAPGTILSADKHGIQIATVDGVLNLLQLQPSGKKPMSAQ 301
Query: 296 DFLLGC 301
D L G
Sbjct: 302 DLLNGR 307
>gi|297537406|ref|YP_003673175.1| methionyl-tRNA formyltransferase [Methylotenera sp. 301]
gi|297256753|gb|ADI28598.1| methionyl-tRNA formyltransferase [Methylotenera sp. 301]
Length = 307
Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 117/311 (37%), Positives = 169/311 (54%), Gaps = 9/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFAV L AL+++ H IV V TQP RPAG RG+K S V A++ L
Sbjct: 1 MKIIFAGTPEFAVPALAALIAAGHQIVMVLTQPDRPAG-RGMKLKASPVKVLAEQHGLHV 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L + + DV +V AYGL+IP +LN K G YN HASLLPRWRGAAP
Sbjct: 60 FQPETLKDTAVQAQIEAAHADVMIVAAYGLIIPTVVLNMPKFGCYNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH-AMVE 180
I R+++ GD ETG+ IM++ LD G + VPI+ + T L LS A +
Sbjct: 120 IHRSLLLGDAETGVTIMEVVPALDAGAMVSKGVVPITESDTTQTLHDALSKTGADLMVQA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ E+ +LP +PQ E+ +TYA K+ K E +++ +SA + +RA +PFP A +
Sbjct: 180 MAELAEKGSLPATPQDESLVTYAHKLEKSEAAIDWQKSAVELSRQVRAFNPFPVAQGILK 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVIN--PNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
E ++ + EG+ K GE+++ T+ C G + I LQ GG+ L F+
Sbjct: 240 G----EVCRIWMATAKEGKAKIGEIVSVQDGVTVGCGDGLLHITELQAPGGKRLSAQAFV 295
Query: 299 LGCPVIIGCIV 309
G + IG
Sbjct: 296 QGHNLQIGDFF 306
>gi|261493879|ref|ZP_05990391.1| methionyl-tRNA formyltransferase [Mannheimia haemolytica serotype
A2 str. BOVINE]
gi|261310481|gb|EEY11672.1| methionyl-tRNA formyltransferase [Mannheimia haemolytica serotype
A2 str. BOVINE]
Length = 317
Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 122/305 (40%), Positives = 177/305 (58%), Gaps = 6/305 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL+ S H++++VYTQP +PAG RG K S V + A+ ++P
Sbjct: 3 KLNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAG-RGKKLQASLVKQLAEAHNIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +EE + L DV VVVAYGL++P+ +LNA K G N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKEEAQAELKALNADVMVVVAYGLILPEAVLNAPKYGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM MD LDTG + PI N +A L +L+ L A++E
Sbjct: 122 PIQRSIWAGDTETGVTIMLMDVGLDTGDMLHKVTTPIEPNETSASLYAKLAELAPLALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L + Q E YAEK+SK E ++++ A + +IRA +P+P ++L +
Sbjct: 182 VLNGLANHTFKAEKQDEALSNYAEKLSKEEAKLDWQLPAVQLERNIRAFNPWPFSFLTLT 241
Query: 241 IGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + IK+ ++ ++ + K G VI IA QG + I +LQ A + + + D
Sbjct: 242 VDGVEQSIKIHQATVLPHQEKAAGTVINVDKTGIQIATQQGVLNITQLQPASKKPMSVQD 301
Query: 297 FLLGC 301
FL G
Sbjct: 302 FLNGR 306
>gi|99082417|ref|YP_614571.1| methionyl-tRNA formyltransferase [Ruegeria sp. TM1040]
gi|123077454|sp|Q1GDF7|FMT_SILST RecName: Full=Methionyl-tRNA formyltransferase
gi|99038697|gb|ABF65309.1| methionyl-tRNA formyltransferase [Ruegeria sp. TM1040]
Length = 308
Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 150/308 (48%), Positives = 193/308 (62%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT EF+V L ALV + H I +VY QPPRPAG RG K + VH +A+ L
Sbjct: 1 MRVIFMGTPEFSVPVLDALVEAGHEIAAVYCQPPRPAG-RGKKDRPTPVHARAEALGLEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G EE + F + NADVAVVVAYGL++PQ +L+A + G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKGSEEQQAFAALNADVAVVVAYGLILPQAVLDAPRAGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD TGI IM+M+ LDTGPV ++ I TA L LS++ A +V+A
Sbjct: 120 IHRAIMAGDTHTGICIMQMEAGLDTGPVLLRKETEIGGEETTAALHDRLSLMGARMIVDA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L +L PQ E G+TYA KI K E ++++ +AE V IR LSPFPGAW E+
Sbjct: 180 LATL--PDLKAEPQPEAGVTYASKIDKAEAQIDWSVAAEEVDRKIRGLSPFPGAWFEV-- 235
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+R+K+L S+L EG G G V++ T+AC GAV ++RLQRAG D FL G
Sbjct: 236 --DGQRLKVLASRLAEGTGAVGTVLDDKLTVACGSGAVELLRLQRAGKAAQDREVFLRGF 293
Query: 302 PVIIGCIV 309
+ G +
Sbjct: 294 TLAKGTNL 301
>gi|54310618|ref|YP_131638.1| methionyl-tRNA formyltransferase [Photobacterium profundum SS9]
gi|73919412|sp|Q6LLJ2|FMT_PHOPR RecName: Full=Methionyl-tRNA formyltransferase
gi|46915061|emb|CAG21836.1| Putative Methionyl-tRNA formyltransferase [Photobacterium profundum
SS9]
Length = 314
Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats.
Identities = 110/314 (35%), Positives = 175/314 (55%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E LP
Sbjct: 4 PLRIVFAGTPDFAARHLAALLSSQHEVIAVYTQPDRPAG-RGKKLTASPVKNIALENDLP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ ++ + AD+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPASLRNEDAQQELAALKADIMVVVAYGLLLPKFVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD+ LDTG + + +PI +A + +L+ L +A+++
Sbjct: 123 PIQRSIWAGDEETGVTIMQMDEGLDTGDMLTIATLPIEPTDTSATMYDKLAGLGPNALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ Q + YA+K++K E ++++ A + IRA +P+P ++ +
Sbjct: 183 CLSEISAGTAIAEKQNDELANYAKKLNKEEAKIDWAMEATAIERCIRAFNPWPMSYFAVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
N ++E++ PG ++ T+A +GA+R++ LQ G + + D
Sbjct: 243 EQNVKVWHAVVEAE--NQGKAPGTILSADKQGITVATGKGALRLIELQPPGKKAMKAQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNSRREWFELGTQL 314
>gi|240849748|ref|YP_002971136.1| methionyl-tRNA formyltransferase [Bartonella grahamii as4aup]
gi|240266871|gb|ACS50459.1| methionyl-tRNA formyltransferase [Bartonella grahamii as4aup]
Length = 309
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 160/307 (52%), Positives = 208/307 (67%), Gaps = 2/307 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR+ FMGT +F+V L+AL+ + H +V+VY+QPPRPAGRRGLK + S VH A+E S+
Sbjct: 1 MALRLSFMGTPDFSVPILRALLDAGHDVVAVYSQPPRPAGRRGLKLIPSPVHNVAKEESI 60
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P E+ EQF + + DVA+VVAYGL++P+ IL + G +N HASLLPRWRGA
Sbjct: 61 PIFTPQTLKTIEQQEQFAALSVDVAIVVAYGLLLPKAILETPRFGCFNAHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD ETGI IMKMD+ LDTGP+A R +PI+ N TA L +LS + A MV
Sbjct: 121 APIQRAIMAGDKETGIMIMKMDEGLDTGPIALSRSIPITDNTTTAELLNKLSHIGAELMV 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + LE+ L L+PQ E GITYA KI K ETR+++ + AE +H HIRALS PG W M
Sbjct: 181 ETLSTLEKGQLKLTPQSEEGITYAAKIKKEETRIDWTKPAEFIHRHIRALSSSPGCWCNM 240
Query: 240 MIGNKHERIKLLESQLVEG-EGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
IG + ER+K+L+S+L G + G + + + C QG + I LQR+GG+VLD FL
Sbjct: 241 NIGGREERVKILDSRLTTGPSLEIGRIEPDSLIVHCGQGRIEITSLQRSGGKVLDSATFL 300
Query: 299 LGCPVII 305
G +
Sbjct: 301 RGAHISA 307
>gi|90413778|ref|ZP_01221766.1| methionyl-tRNA formyltransferase [Photobacterium profundum 3TCK]
gi|90325247|gb|EAS41744.1| methionyl-tRNA formyltransferase [Photobacterium profundum 3TCK]
Length = 314
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 111/315 (35%), Positives = 177/315 (56%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E LP
Sbjct: 4 PLRIVFAGTPDFAARHLAALLSSQHEVIAVYTQPDRPAG-RGKKLTASPVKNIALENDLP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ ++ + NAD+ +VVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPASLRNEDAQQELSALNADIMIVVAYGLLLPKIVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD+ LDTG + + + I +A + +L+ L +A+++
Sbjct: 123 PIQRSIWAGDEETGVTIMQMDEGLDTGDMLTIATLAIEPTDTSATMYDKLAGLGPNALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ Q + YA+K++K E ++++ A + IRA +P+P ++ +
Sbjct: 183 CLSEISAGTAIAKKQNDELANYAKKLNKEEAKIDWAMEATAIERCIRAFNPWPMSYFAVA 242
Query: 241 IGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
N ++E+ + +GK PG ++ T+A +GA+R++ LQ G + + D
Sbjct: 243 EQNVKVWHAVVEA---DNQGKTPGTILSADKQGITVATGKGALRLIELQPPGKKAMKAQD 299
Query: 297 FLLGCP--VIIGCIV 309
L G +
Sbjct: 300 ILNSRREWFEPGTQL 314
>gi|323141162|ref|ZP_08076063.1| methionyl-tRNA formyltransferase [Phascolarctobacterium sp. YIT
12067]
gi|322414305|gb|EFY05123.1| methionyl-tRNA formyltransferase [Phascolarctobacterium sp. YIT
12067]
Length = 311
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 105/314 (33%), Positives = 162/314 (51%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VFMGT +FAV +LQAL S H I++V TQP RP G RG K + + V + A L
Sbjct: 1 MRIVFMGTPDFAVGSLQALCESGKHEILAVVTQPDRPKG-RGNKLLQTPVKEYALAQGLT 59
Query: 62 ALVPTKLGQEEYEQ-FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ E+ + ++ VV A+G + + IL K G N HASLLP++RGAA
Sbjct: 60 VYQPQKVKTPEFVELLHELQPELIVVAAFGQFLSKEILELPKYGCINVHASLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI+ G+ E+G+ IM+MD +DTG + VPI N L L A +++
Sbjct: 120 PIQYAIIKGEKESGVTIMQMDIGMDTGAMLDKVVVPIEENTTMGELHYALREQGAALLLQ 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+DK+ PQ TYA + + +++ ++A+ VHN IR +P P + ++
Sbjct: 180 VIDKIAAGTAVAEPQDNEQATYATLLDRSMEHIDWSKTAQEVHNLIRGFNPAPSTFTKLP 239
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
G +K+ S++ + G VI +F +AC +G + I +Q + +
Sbjct: 240 NGKG---LKIWGSKMTDKNSAAAAGTVIETGKHSFFVACGEGVLEITEVQPESKKRMPAQ 296
Query: 296 DFLLGCPVIIGCIV 309
FL G V G ++
Sbjct: 297 VFLNGRGVQEGDLL 310
>gi|56419707|ref|YP_147025.1| methionyl-tRNA formyltransferase [Geobacillus kaustophilus HTA426]
gi|73919394|sp|Q5L0S3|FMT_GEOKA RecName: Full=Methionyl-tRNA formyltransferase
gi|56379549|dbj|BAD75457.1| methionyl-tRNA formyltransferase [Geobacillus kaustophilus HTA426]
Length = 319
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 104/317 (32%), Positives = 163/317 (51%), Gaps = 11/317 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +VFMGT +FAV L+ L+ + + +V TQP +P G R + V V +A+ +
Sbjct: 1 MT-NIVFMGTPDFAVPILRQLLDDGYHVAAVVTQPDKPKG-RKREPVPPPVKVEAERRGI 58
Query: 61 PALVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L PTK+ + E + + +F D+ V A+G ++P+ +L+A K G N HASLLP RG
Sbjct: 59 PVLQPTKIREPEQYEQVLAFAPDLIVTAAFGQILPKALLDAPKYGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI G +TG+ IM M + LD G + +VPI+ L +LS A +
Sbjct: 119 APIHYAIWQGKTKTGVTIMYMVERLDAGDMLAQVEVPIAETDTVGTLHDKLSAAGAKLLS 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + L + N+ PQ E TYA I + + R+++ + E ++NHIRA P+P +
Sbjct: 179 ETLPLLLEGNIAPVPQDEEKATYAPNIRREQERIDWTQPGEAIYNHIRAFHPWPVTYTT- 237
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLDIG 295
++ E PG ++ +A + A+RI LQ AG + + +G
Sbjct: 238 -QDGHIWKVWWGEKVPAPRSAPPGTILALEENGIVVATGNETAIRITELQPAGKKRMAVG 296
Query: 296 DFLLGC--PVIIGCIVG 310
+FL G + +G +G
Sbjct: 297 EFLRGAGSRLAVGMKLG 313
>gi|154685989|ref|YP_001421150.1| hypothetical protein RBAM_015560 [Bacillus amyloliquefaciens FZB42]
gi|166214872|sp|A7Z4J3|FMT_BACA2 RecName: Full=Methionyl-tRNA formyltransferase
gi|154351840|gb|ABS73919.1| Fmt [Bacillus amyloliquefaciens FZB42]
Length = 317
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 108/317 (34%), Positives = 165/317 (52%), Gaps = 13/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT R+VFMGT +F+V L+ L+ + +V V TQP RP G R V +A+ +
Sbjct: 1 MT-RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKG-RKKIMTPPPVKAEAERHGI 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P K+ +EE E+ LS D+ V A+G ++P+++L+ K G N HASLLP RG
Sbjct: 59 PVLQPEKVRLEEEIEKVLSLKPDLIVTAAFGQILPKQLLDGPKYGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +I+ G +TG+ IM M + LD G + +V I N L +LS+ A +
Sbjct: 119 APIHYSILQGKKKTGVTIMYMVEKLDAGDMISKIEVEIDETDNVGTLHDKLSIAGAKLLS 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + N+ Q E+ TYA I + + R+++ + E ++N IR L+P+P A+ +
Sbjct: 179 ETVPNVISGNIKPIKQDESKATYAPNIKREQERIDWAKPGEEIYNQIRGLNPWPVAYTTL 238
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVIN---PNFTIACSQG-AVRIMRLQRAGGRVLD 293
N K+ S+ V + E PG VI +A A+ I LQ AG + +
Sbjct: 239 NGQNM----KVWASEKVAAKTEAAPGTVIRTEQNGIVVASGNSTALLITELQPAGKKRMK 294
Query: 294 IGDFLLGCPVIIGCIVG 310
DF+ G V G ++G
Sbjct: 295 GEDFVRGKNVQPGDVLG 311
>gi|325977627|ref|YP_004287343.1| methionyl-tRNA formyltransferase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325177555|emb|CBZ47599.1| fmt [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
Length = 311
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 99/316 (31%), Positives = 165/316 (52%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ A L+ L+ S++ +++V TQP R G R + ++ V + A +
Sbjct: 1 MT-KLIFMGTPDFSAAVLKGLLDDSNYDVLAVVTQPDRAVG-RKKEIKMTPVKEVALAHN 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P K+ E L +V A L + N HASLLP++RG
Sbjct: 59 LPVYQPEKMSGSEEMAELMTLGADGIVTAAFGQFLPTKLLDSVDFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G+ E G+ IM+M K +D G + PI+ + N + ++L+V+ ++
Sbjct: 119 APIHYAIINGEEEAGVTIMEMVKKMDAGDMIAKASTPITDDDNVGTMFEKLAVIGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + N+ PQ E+ T++ I+ E R+++ +SA +V NHIR L P+P A +
Sbjct: 179 KTLPDYIAGNIKPEPQDESKATFSPNITPEEERIDWNKSARDVFNHIRGLYPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E+ L EG G+PGE+I +A GA+ + +Q AG + + D
Sbjct: 239 ----DGKRFKIYEATLAEGHGRPGEIIEKGKKSLVVATGDGAISLKTVQPAGKPRMSVVD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G ++G
Sbjct: 295 FLNGVGRKLEVGDLIG 310
>gi|313672041|ref|YP_004050152.1| methionyl-tRNA formyltransferase [Calditerrivibrio nitroreducens
DSM 19672]
gi|312938797|gb|ADR17989.1| methionyl-tRNA formyltransferase [Calditerrivibrio nitroreducens
DSM 19672]
Length = 307
Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats.
Identities = 108/313 (34%), Positives = 171/313 (54%), Gaps = 13/313 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT E AV TL ++ + V QP +P G RG K S V + A + +L
Sbjct: 1 MKLVFMGTPEMAVPTLDMILKEGFEVPLVVCQPDKPKG-RGNKLQPSPVKEFALDHNLEV 59
Query: 63 LVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ E+ S D VVVAYG ++P+ +L+ N H SLLP++RGAA
Sbjct: 60 FQPEKIKNNPEAIEKIRSLKPDFLVVVAYGKILPKELLDIPTFAPINVHFSLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ AI+ G+ ETG+A MKMD+ LDTG + M+ +PI + T L ++LS L A ++E
Sbjct: 120 PVNWAIINGEKETGVATMKMDEGLDTGDILLMKSIPIEKDDTTITLSEKLSKLGADLLIE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +N+ +PQ TYA I K + +++F ++AE + IR P+P A+
Sbjct: 180 TLKN--YHNITPTPQDHASYTYAPIIKKEDGKIDFTKNAEVIERMIRGFQPWPTAYCFYK 237
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGD 296
+ +K ++++V+ GKPGEV+ +F +AC + + +RI+ LQ G +D
Sbjct: 238 G----KMVKFFKAEVVKANGKPGEVVGVDKSSFLVACGEDSGLRILELQMEGKNRVDAKS 293
Query: 297 FLLGCPVIIGCIV 309
FL G + +G +
Sbjct: 294 FLTGNTINVGDLF 306
>gi|261419370|ref|YP_003253052.1| methionyl-tRNA formyltransferase [Geobacillus sp. Y412MC61]
gi|297530653|ref|YP_003671928.1| methionyl-tRNA formyltransferase [Geobacillus sp. C56-T3]
gi|319766185|ref|YP_004131686.1| methionyl-tRNA formyltransferase [Geobacillus sp. Y412MC52]
gi|261375827|gb|ACX78570.1| methionyl-tRNA formyltransferase [Geobacillus sp. Y412MC61]
gi|297253905|gb|ADI27351.1| methionyl-tRNA formyltransferase [Geobacillus sp. C56-T3]
gi|317111051|gb|ADU93543.1| methionyl-tRNA formyltransferase [Geobacillus sp. Y412MC52]
Length = 319
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 104/317 (32%), Positives = 162/317 (51%), Gaps = 11/317 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +VFMGT +FAV L+ L+ + + +V TQP +P G R + V V +A+ +
Sbjct: 1 MT-NIVFMGTPDFAVPILRQLLHDGYRVAAVVTQPDKPKG-RKREPVPPPVKVEAERRGI 58
Query: 61 PALVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L PTK+ + E + + +F D+ V A+G ++P+ +L+A K G N HASLLP RG
Sbjct: 59 PVLQPTKIREPEQYEQVLAFAPDLIVTAAFGQILPKALLDAPKYGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI G +TG+ IM M + LD G + +VPI+ L +LS A +
Sbjct: 119 APIHYAIWQGKTKTGVTIMYMVERLDAGDMLAQVEVPIAETDTVGTLHDKLSAAGAKLLS 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + L + N+ PQ E TYA I + + R+++ + E ++NHIRA P+P +
Sbjct: 179 ETLPLLLEGNITPVPQDEEKATYAPNIRREQERIDWTQPGEAIYNHIRAFHPWPVTYTT- 237
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLDIG 295
++ E PG ++ +A + A+RI LQ AG + + G
Sbjct: 238 -QDGHIWKVWWGEKVPAPRSAPPGTILALEENGIVVATGNETAIRITELQPAGKKRMAAG 296
Query: 296 DFLLGC--PVIIGCIVG 310
+FL G + +G +G
Sbjct: 297 EFLRGAGSRLAVGMKLG 313
>gi|95928562|ref|ZP_01311309.1| methionyl-tRNA formyltransferase [Desulfuromonas acetoxidans DSM
684]
gi|95135352|gb|EAT17004.1| methionyl-tRNA formyltransferase [Desulfuromonas acetoxidans DSM
684]
Length = 314
Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats.
Identities = 121/313 (38%), Positives = 178/313 (56%), Gaps = 9/313 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
T+R VFMGT +FA+ TLQ L+ S +V VYTQP RP G RG K V + A E +P
Sbjct: 6 TIRTVFMGTPDFALDTLQGLIESGVQMVGVYTQPDRPKG-RGKKLAAPPVKELALEHDIP 64
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K +E +Q S + D+ VVVAYG ++PQ +L+ K G N HASLLPR RGAA
Sbjct: 65 VFQPQKLRDEEAVKQLRSLSPDLIVVVAYGQILPQAVLDIPKYGCINVHASLLPRHRGAA 124
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI +AI+ GD TG+ M MD LDTG + + + I + L L+ L AM E
Sbjct: 125 PINKAIVDGDPMTGVTTMMMDVGLDTGDMLVKKSLSIHPDETAGQLHDRLAPLGREAMEE 184
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L L Q ++ TYA + K + +++ + A +HN +R L P+PGA+ +
Sbjct: 185 TLARLCAGTLAREKQDDSLSTYASMMKKEDGCIDWSKEARQIHNLVRGLDPWPGAYTLL- 243
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +KL +++ VEG+G+PG+V+ + +AC QGA+++ LQ G ++L DF
Sbjct: 244 ---DGQTLKLAKTRCVEGQGEPGQVLEASGETVIVACGQGALQLGALQLPGKKMLSAADF 300
Query: 298 LLGCPVIIGCIVG 310
L G + G ++G
Sbjct: 301 LRGRGLEKGNLLG 313
>gi|331269685|ref|YP_004396177.1| methionyl-tRNA formyltransferase [Clostridium botulinum BKT015925]
gi|329126235|gb|AEB76180.1| methionyl-tRNA formyltransferase [Clostridium botulinum BKT015925]
Length = 309
Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 170/314 (54%), Gaps = 13/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT EFAV +L+A++ + + +V+TQP RP G RG K +S V + A + ++
Sbjct: 1 MKIVFMGTPEFAVPSLEAIIDN-FGVEAVFTQPDRPKG-RGKKVAMSPVKEVALKNNIEV 58
Query: 63 LVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
PTK E E+ + D +VVAYG ++P+ +L K N HASLLP++RGAA
Sbjct: 59 CQPTKLKNESEFIEKLKNIEPDFIIVVAYGQILPKEVLEIPKYACINLHASLLPKYRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ I+ G+ ++G M MD LDTG + ++V I+ ++ L L +VE
Sbjct: 119 PLNWVIINGEKKSGNTTMLMDVGLDTGDMLMTQEVEINEDMTAGELHDILMNQGGELLVE 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++K+ + + Q E+ YA + K +++ SA+N+HN IR L+P+P A+
Sbjct: 179 TINKMVKGEINPQKQDESSTCYASMLDKNMACIDWKNSAKNIHNLIRGLNPWPVAYTHY- 237
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ +SQ++ + +PG +I + C G + + +Q G + L +
Sbjct: 238 ---NDKAMKIYKSQMLNEKSDKEPGTIIEVSKNGLKVVCGDGTLLVEEIQFPGKKSLRVE 294
Query: 296 DFLLGCPVIIGCIV 309
+++ G + +G I+
Sbjct: 295 EYIRGNSIDVGSIL 308
>gi|154505953|ref|ZP_02042691.1| hypothetical protein RUMGNA_03495 [Ruminococcus gnavus ATCC 29149]
gi|153793971|gb|EDN76391.1| hypothetical protein RUMGNA_03495 [Ruminococcus gnavus ATCC 29149]
Length = 310
Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 102/313 (32%), Positives = 168/313 (53%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT +F+V TL+AL+ + H + TQP +P G RG + V + A +P
Sbjct: 1 MRVIFMGTPDFSVGTLEALIEAGHEVCLAVTQPDKPKG-RGKEMQFPPVKEAALSHGIPV 59
Query: 63 LVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ + + L+ + ADV VVVA+G ++P+ IL T G N HASLLP++RGAAP
Sbjct: 60 FQPIKVREAACVEELAGYKADVIVVVAFGQILPKAILELTPYGCVNVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ AI+ G++ TG+ M+MD+ LDTG + +VPI++ L +LS A VE
Sbjct: 120 IQWAIIDGEDVTGVTTMQMDEGLDTGDMLLKTEVPITAEETGESLHDKLSKAGAALCVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ + Q E YA ++K +++ SAE + IR L+ +P A+
Sbjct: 180 LKALEEGTIVPQKQGETPTHYASMLNKKMGNIDWNASAEAIERLIRGLNSWPSAYT---- 235
Query: 242 GNKHERIKLLESQLVE--GEGKPGE---VINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+++ +K+ +++ + + +PG V +F++ G + + LQ G + +
Sbjct: 236 HWENKVVKIWSAKVSKEQTKAQPGTVTDVTKDSFSVQTGDGTLIVQELQIPGKKRMKTDA 295
Query: 297 FLLGCPVIIGCIV 309
FL G + G +
Sbjct: 296 FLRGYHLEEGTLF 308
>gi|306832886|ref|ZP_07466019.1| methionyl-tRNA formyltransferase [Streptococcus bovis ATCC 700338]
gi|304424961|gb|EFM28094.1| methionyl-tRNA formyltransferase [Streptococcus bovis ATCC 700338]
Length = 311
Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 103/316 (32%), Positives = 168/316 (53%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ A L+ L+ S++ +++V TQP R G R + ++ V + A +
Sbjct: 1 MT-KLIFMGTPDFSAAVLKGLLDDSNYDVLAVVTQPDRAVG-RKKEIKMTPVKEVALAHN 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P K+ E L +V A L + N HASLLP++RG
Sbjct: 59 LPVYQPEKMSGSEEMAELMTLGADGIVTAAFGQFLPTKLLDSVDFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G+ E G+ IM+M K +D G + PI+ + N + ++L+V+ ++
Sbjct: 119 APIHYAIINGEEEAGVTIMEMVKKMDAGDMIAKASTPITDDDNVGTMFEKLAVIGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + N+ PQ E+ T++ I+ E R+++ +SA +V NHIR LSP+P A +
Sbjct: 179 KTLPDYIAGNIKPEPQDESKATFSPNITPEEERIDWNKSARDVFNHIRGLSPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E+ L EG GKPGE+I +A GA+ + +Q AG ++IGD
Sbjct: 239 ----DGKRFKIYEATLAEGHGKPGEIIEKGKKSLVVATGDGAISLKTVQPAGKPCMNIGD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G ++G
Sbjct: 295 FLNGVGRKLEVGDLIG 310
>gi|51892482|ref|YP_075173.1| 10-formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase
[Symbiobacterium thermophilum IAM 14863]
gi|73919421|sp|Q67PR4|FMT_SYMTH RecName: Full=Methionyl-tRNA formyltransferase
gi|51856171|dbj|BAD40329.1| 10-Formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase
[Symbiobacterium thermophilum IAM 14863]
Length = 326
Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 120/315 (38%), Positives = 175/315 (55%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L+++FMGT EFA +L+AL+ + + +V V TQP +PAG RG K S V + A LP
Sbjct: 2 LKILFMGTPEFAAVSLRALLEAGYPVVGVVTQPDKPAG-RGGKLRPSPVKEVALAHGLPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + E Q +D+ VVVAYG ++ + L + LG N HASLLPRWRGAAP
Sbjct: 61 FQPRRLRRPEVVAQLKELGSDLTVVVAYGQILSREALEISPLGSINVHASLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETG+ M MD+ +DTG V +VPI + L EL+ + A ++E
Sbjct: 121 IQRAIMAGDVETGVCTMWMDEGMDTGDVCLTARVPIGPDTTGGELHDELARVGAELLLET 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++E + P PQ G+TYA K+ + +++ R AE ++N IRAL+P+PGA+
Sbjct: 181 VRRVEAGDAPRIPQPAEGVTYAAKLEPADEVIDWARPAEELYNQIRALNPWPGAYTN--- 237
Query: 242 GNKHERIKLLESQLVEGE---GKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
R+K+ + +V +PG V+ FT+A GA+ + +Q G +D
Sbjct: 238 -GPRGRLKIWRASVVPNPEPGAEPGTVVALVRREGFTVAAGDGALLVREVQPHGKARMDA 296
Query: 295 GDFLLGCPVIIGCIV 309
F+ G V +G
Sbjct: 297 QSFVNGGGVQVGTRF 311
>gi|328545267|ref|YP_004305376.1| methionyl-tRNA formyltransferase [polymorphum gilvum SL003B-26A1]
gi|326415009|gb|ADZ72072.1| Methionyl-tRNA formyltransferase [Polymorphum gilvum SL003B-26A1]
Length = 320
Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 150/320 (46%), Positives = 204/320 (63%), Gaps = 12/320 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+LR+VFMGT EF+V TL +V H +V+ Y+QPPRPAG RG+ S VH+ A+ +
Sbjct: 1 MSLRIVFMGTPEFSVPTLMEIVGQGHEVVACYSQPPRPAG-RGMDLRKSPVHEAAETLGI 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P PT +E E+F + +ADVAVVVAYGL++P+ IL A + G N HASLLPRWRGA
Sbjct: 60 PVFTPTSLKDPQEQERFAALDADVAVVVAYGLLLPKPILEAPREGCLNLHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API RAI+AGD ETG+ +M+M++ LDTGPV VPI ++ L LS L A MV
Sbjct: 120 APINRAIIAGDRETGVEVMRMEEGLDTGPVCMSEVVPIGPDMTAGDLHDRLSTLGADLMV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
A+ L + L +PQ E G TYA KISK E R+++ + A VHNHIR LSPFPGAW E+
Sbjct: 180 RALAALSRGALMQTPQAETGATYAAKISKAECRIDWTKGAAAVHNHIRGLSPFPGAWCEV 239
Query: 240 MIGNKHERIKLL--------ESQLVEGEGKPGEVIN--PNFTIACSQGAVRIMRLQRAGG 289
+G + ERIK+L E++ +G G G V++ +AC GAVR++++QRAG
Sbjct: 240 ALGGRTERIKVLRSRVEARSEARSEDGTGVAGTVLDVSEAPVVACGSGAVRLLQVQRAGK 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ + +F G + G ++
Sbjct: 300 KPMSGAEFQRGAKLQAGVVL 319
>gi|322831105|ref|YP_004211132.1| methionyl-tRNA formyltransferase [Rahnella sp. Y9602]
gi|321166306|gb|ADW72005.1| methionyl-tRNA formyltransferase [Rahnella sp. Y9602]
Length = 311
Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 118/315 (37%), Positives = 173/315 (54%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT +FA L AL+SS H +V V+TQP RPAG RG K S V AQ +P
Sbjct: 1 MRIIFAGTPDFAARHLDALLSSEHQVVGVFTQPDRPAG-RGNKLTASPVKVLAQTHDIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P +E + AD+ VVVAYGL++P+ +L+ KLG N H SLLPRWRGAAP
Sbjct: 60 FQPKSLRPEENQSLVSALEADIMVVVAYGLILPKAVLDMPKLGCINVHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQR++ AGD +TGI IM+MD LDTG + + I +A L +L+ L M+E
Sbjct: 120 IQRSLWAGDTKTGITIMQMDVGLDTGDMLHKVECDILPEDTSASLYNKLAELGPQGMLET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L + Q E +TYAEK+SK E R+++ SAE + IRA +P+P ++ +
Sbjct: 180 LQQLANGSAKPEVQSEEHVTYAEKLSKEEARLDWNLSAEQLERCIRAFNPWPVSFFMIDD 239
Query: 242 GNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++ + G PG ++ IA S G + I +LQ +G + + D
Sbjct: 240 ----QPVKVWQAECLSGKSSAAPGTIVAADKKGIQIATSDGILNITQLQPSGKKAMSAQD 295
Query: 297 FLLGCP--VIIGCIV 309
L I G +
Sbjct: 296 LLNSRREWFIEGTRL 310
>gi|319775434|ref|YP_004137922.1| methionyl-tRNA formyltransferase [Haemophilus influenzae F3047]
gi|329122538|ref|ZP_08251121.1| methionyl-tRNA formyltransferase [Haemophilus aegyptius ATCC 11116]
gi|317450025|emb|CBY86239.1| methionyl-tRNA formyltransferase [Haemophilus influenzae F3047]
gi|327473143|gb|EGF18567.1| methionyl-tRNA formyltransferase [Haemophilus aegyptius ATCC 11116]
Length = 318
Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats.
Identities = 112/318 (35%), Positives = 183/318 (57%), Gaps = 10/318 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQA+++S H++++VYTQ +PAG RG K S V + A++ +
Sbjct: 1 MKSLNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQSDKPAG-RGKKLQASPVKQLAEQNN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ P L +EE + L DV VVVAYGL++P+ +L+A +LG N H S+LPRWRG
Sbjct: 60 IRVYQPKSLFKEEAQSELKALNADVMVVVAYGLILPKAVLDAPRLGCLNVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQR+I AGD +TG+ IM+MD+ LDTG + I + L +L+ L A+
Sbjct: 120 AAPIQRSIWAGDVQTGVTIMQMDEGLDTGDMLHKIYCDILPTETSTSLYNKLAELAPSAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ +D LE + Q + YAEK+SK E ++++ A + +IRA +P+P A+
Sbjct: 180 IDVLDNLENSKFIAEKQDGSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIAYFL 239
Query: 239 MMIGN-KHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + +K+ +++++ + KP G ++ IA G +++++LQ AG + +
Sbjct: 240 TEDKDGNAQILKVYQAEVLPHQDKPAGTILSADKNGIQIATVDGVLKLLQLQPAGKKPMS 299
Query: 294 IGDFLLGCP--VIIGCIV 309
D L G IG ++
Sbjct: 300 AQDLLNGRAEWFTIGKVL 317
>gi|238763702|ref|ZP_04624661.1| Methionyl-tRNA formyltransferase [Yersinia kristensenii ATCC 33638]
gi|238698004|gb|EEP90762.1| Methionyl-tRNA formyltransferase [Yersinia kristensenii ATCC 33638]
Length = 320
Score = 192 bits (487), Expect = 7e-47, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 173/316 (54%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K S V A++ ++P
Sbjct: 9 SLRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAG-RGNKLTPSPVKVLAEQHNIP 67
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE + ++ D+ VVVAYGL++P +L +LG N H SLLPRWRGAA
Sbjct: 68 VFQPKSLRPEENQHLVADLNADIMVVVAYGLILPASVLVMPRLGCINVHGSLLPRWRGAA 127
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD +TG+ IM+MD LDTG + + I +A L +L+ L ++
Sbjct: 128 PIQRSLWAGDAKTGVTIMQMDVGLDTGDMLHKIECNIQPEDTSATLYDKLAQLGPQGLLV 187
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + Q E +TYAEK+SK E ++++ SA + IRA +P+P ++ +
Sbjct: 188 TLQQLAEGRAQPEVQDEAQVTYAEKLSKEEAKLDWSLSAVQLERCIRAFNPWPVSYFVV- 246
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ ++Q++ PG +I IA + G + I +LQ AG + +
Sbjct: 247 ---DEQPIKVWQAQVLATVDNVAPGTIIQADKHGIQIATADGVLNITQLQPAGKKAMSAA 303
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 304 DLLNSRREWFTPGNQL 319
>gi|261866824|ref|YP_003254746.1| methionyl-tRNA formyltransferase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412156|gb|ACX81527.1| methionyl-tRNA formyltransferase [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 318
Score = 192 bits (486), Expect = 7e-47, Method: Composition-based stats.
Identities = 118/306 (38%), Positives = 177/306 (57%), Gaps = 7/306 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL++SSH++++VYTQP +PAG RG K S V + A++ +P
Sbjct: 3 PLNIIFAGTPDFAARHLQALLNSSHNVIAVYTQPDKPAG-RGKKLQSSPVKQLAEQHQIP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E + + ADV VVVAYGL++PQ +L+A K G N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKAETQAELTALQADVMVVVAYGLILPQVVLDAPKYGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD +TG+ M+MD LDTG + I+ +AGL +L+ + A+VE
Sbjct: 122 PIQRAIWAGDAQTGVTTMQMDAGLDTGDMLHKVYCDITLQETSAGLYAKLAEIAPAALVE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D L Q + +YAEK+SK E ++N+ SA + +IRA +P+P A+LE+
Sbjct: 182 VLDHLTDGTFTAERQDDAQSSYAEKLSKEEAKLNWQLSAAQLERNIRAFNPWPIAYLELT 241
Query: 241 I-GNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++ K PG ++ IA G + +++LQ +G + +
Sbjct: 242 DGAGNPQTLKVYQAAVLPHTNKAPGTILSADKHGIQIATVDGVLNLLQLQPSGKKPMSAQ 301
Query: 296 DFLLGC 301
D L G
Sbjct: 302 DLLNGR 307
>gi|331086045|ref|ZP_08335128.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406968|gb|EGG86473.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 321
Score = 192 bits (486), Expect = 7e-47, Method: Composition-based stats.
Identities = 102/322 (31%), Positives = 166/322 (51%), Gaps = 15/322 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT EF+V TL+ LV + H +V TQP +P G RG + + V + A +P
Sbjct: 1 MRVIFMGTPEFSVGTLETLVEAGHEVVLAVTQPDKPKG-RGKEMQFTPVKEAAIRHQIPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ ++ + S+ ADV VV+A+G ++P+ IL T G N HASLLP++RGAAP
Sbjct: 60 YQPVKVREKACVEVLKSYEADVIVVIAFGQILPKSILELTPYGCINVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ +G+ M+MD+ LDTG + ++V + L +L+ A VE
Sbjct: 120 IQWAVIDGEKVSGVTTMQMDEGLDTGDMILKKEVILDEKETGGSLHDKLAEAGAALCVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +LE+ P Q E YA+ ++K +++ + AE + IR L+P+P A+
Sbjct: 180 LKRLEEGTAPAEKQGETTTDYAKMLTKQMGEIDWKQPAEKIERLIRGLNPWPSAYTYWNQ 239
Query: 242 GNKHERIKLLESQLV----------EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAG 288
+ E+ +PG + F++ +G + ++ LQ G
Sbjct: 240 KVMKIWLADTEADESGEKEKMASEEAKHPEPGTITAVAKDRFSVQTGEGLLTVLELQIPG 299
Query: 289 GRVLDIGDFLLGCPVIIGCIVG 310
+ +D G FL G + G I+G
Sbjct: 300 KKRMDAGAFLRGYQIKAGEILG 321
>gi|326790874|ref|YP_004308695.1| methionyl-tRNA formyltransferase [Clostridium lentocellum DSM 5427]
gi|326541638|gb|ADZ83497.1| methionyl-tRNA formyltransferase [Clostridium lentocellum DSM 5427]
Length = 311
Score = 192 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 104/315 (33%), Positives = 166/315 (52%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ VVFMGT +FAV TL+ L+ +++ +V TQP +P G RG K + V + A L
Sbjct: 1 MNVVFMGTPDFAVPTLEMLIDEKYTVSAVVTQPDKPKG-RGKKESMPPVKEVALAHGLSV 59
Query: 63 LVPTKLGQE--EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K+ + Y S N DV VVVA+G ++P+ ILN K G N H SLLP++RGAA
Sbjct: 60 LQPEKIRGDEAFYNHIQSLNPDVIVVVAFGQILPESILNIPKYGCINIHGSLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ +I+ + TG+ IM MDK +DTG + +++ I A L ++ ++ A A+ E
Sbjct: 120 PIQWSIINEELITGVTIMYMDKGMDTGDMLLKKEIVIDEADTYASLHDKMKIVGAEALKE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
AM + Q E+ TYA I K + + S ++ +R L+P+PG +
Sbjct: 180 AMPMIIAGGKERQKQEESEATYAALIQKSLGEIKWQASTSSIDALVRGLNPWPGGYTYYK 239
Query: 241 IGNKHERIKLLES--QLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
E +K+ ++ L +GEG PG ++ + G++ I +Q + + +
Sbjct: 240 G----EVMKIWKAVKTLKQGEGAPGTILEVSKEGIFVKTLDGSLCIQEIQMPNKKRMPVS 295
Query: 296 DFLLGCPVIIGCIVG 310
+++ G + IG I+G
Sbjct: 296 EYIKGNTLDIGVILG 310
>gi|118443626|ref|YP_878317.1| methionyl-tRNA formyltransferase [Clostridium novyi NT]
gi|166214889|sp|A0Q115|FMT_CLONN RecName: Full=Methionyl-tRNA formyltransferase
gi|118134082|gb|ABK61126.1| methionyl-tRNA formyltransferase [Clostridium novyi NT]
Length = 309
Score = 192 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 168/314 (53%), Gaps = 13/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT EFAV +L+A+V + ++ V+TQP RP G RG K +S V + A E ++
Sbjct: 1 MKIVFMGTPEFAVPSLKAMVEN-FNVEGVFTQPDRPKG-RGKKLAMSPVKEVALENNIDV 58
Query: 63 LVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E E+ + D +VVAYG ++P+ +L K N HASLLP++RGAA
Sbjct: 59 YQPVSLRKEPEFIEKLKNIQPDFIIVVAYGQILPKEVLEIPKYACINLHASLLPKYRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ AI+ G+ ++G M MD LDTG + ++V I+ ++ L L + +V+
Sbjct: 119 PLNWAIINGEKKSGNTTMLMDVGLDTGDMLMTQEVDINDSMTAGELHDILMIQGGDLLVD 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++K+ + Q ++ YA + K +++ +SA +HN IR L+P+P A+
Sbjct: 179 TINKMVSGEITPIKQDDSKTCYASMLDKKMACIDWSKSASEIHNLIRGLNPWPVAYTHYD 238
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ +S ++ K PG VIN +AC +G + + +Q G + L +
Sbjct: 239 D----KVMKIYKSHVLNENSKKEPGTVINVSNKGIKVACGEGILVVEEIQFPGKKPLKVE 294
Query: 296 DFLLGCPVIIGCIV 309
++ G + I ++
Sbjct: 295 QYIRGNSIEIESVL 308
>gi|319898268|ref|YP_004158361.1| Methionyl-tRNA formyltransferase [Bartonella clarridgeiae 73]
gi|319402232|emb|CBI75765.1| Methionyl-tRNA formyltransferase [Bartonella clarridgeiae 73]
Length = 309
Score = 192 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 153/307 (49%), Positives = 202/307 (65%), Gaps = 2/307 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR+ FMGT F+V L AL+ + H+IV+VY+QPPRPAGRRGLK S V A+E S+
Sbjct: 1 MALRLSFMGTPSFSVPILYALLEAGHNIVAVYSQPPRPAGRRGLKLSPSPVQIAAKEKSI 60
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P +E QF + DVAVVVAYGL++P+ IL + + G +N HASLLPRWRGA
Sbjct: 61 PVFTPQTLKTTKEQIQFAELSVDVAVVVAYGLLLPKPILESPRFGCFNAHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD ETG+ IMKMD+ LDTGP+A R + I+ N+ L +LS + A +V
Sbjct: 121 APIQRAIMAGDKETGMMIMKMDEGLDTGPIALSRSIAITDNMTAYELSDKLSHIGAKLIV 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EA+ LE+ L +PQ G+TYA KI K ET++++ +SA+ +H HI ALSP PG W M
Sbjct: 181 EALSALEKGQLKFTPQSSEGVTYAAKIKKEETQIDWTKSAKFIHKHICALSPVPGCWCIM 240
Query: 240 MIGNKHERIKLLESQLVE-GEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
I KHER+K+L S+L+E + G + + I C QG + I LQR+GG++LD FL
Sbjct: 241 NINGKHERVKILGSRLIEKHSLEIGRIESEQLIIHCGQGCIEITHLQRSGGKLLDRATFL 300
Query: 299 LGCPVII 305
G +
Sbjct: 301 RGANISA 307
>gi|325272512|ref|ZP_08138889.1| methionyl-tRNA formyltransferase [Pseudomonas sp. TJI-51]
gi|324102355|gb|EGB99824.1| methionyl-tRNA formyltransferase [Pseudomonas sp. TJI-51]
Length = 310
Score = 192 bits (486), Expect = 8e-47, Method: Composition-based stats.
Identities = 122/314 (38%), Positives = 176/314 (56%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L+AL+ S + IV+VYTQP RPAG RG K + SAV A +P
Sbjct: 1 MRIVFAGTPEFAAEHLKALLDSPYEIVAVYTQPDRPAG-RGQKLMPSAVKALAVAHGIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P E + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAAP
Sbjct: 60 LQPQTLRNAEAQAELAALQPDLMVVVAYGLILPQAVLDIPRLGCINSHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+ AGD E+G+ +M+M+ LDTGP+ PIS+ L L+ + A+V+A
Sbjct: 120 IQRAVEAGDTESGVTVMRMEAGLDTGPMLLKVATPISAEDTGDSLHDRLAQMGPPAVVQA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L +L Q + TYA K++K E R+++ R A + IRA +P+P +
Sbjct: 180 IAGLADGSLQGEVQNDALATYAHKLNKDEARLDWRRPAVELERLIRAFNPWPVCHSTL-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
E +K+L + + G+G+PGE++ +AC A+ + RLQ GG+ L D
Sbjct: 238 --DGESVKVLAANVAAGKGEPGEILSASKDGLVVACGDQALSLTRLQLPGGKALTFSDLF 295
Query: 299 LGCP--VIIGCIVG 310
G ++G
Sbjct: 296 NSRREKFAAGKVLG 309
>gi|85707834|ref|ZP_01038900.1| methionyl-tRNA formyltransferase [Erythrobacter sp. NAP1]
gi|85689368|gb|EAQ29371.1| methionyl-tRNA formyltransferase [Erythrobacter sp. NAP1]
Length = 301
Score = 192 bits (486), Expect = 9e-47, Method: Composition-based stats.
Identities = 132/308 (42%), Positives = 179/308 (58%), Gaps = 9/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT +FAV L +L ++ H I VY+QPP +G RG K S VH KA E +
Sbjct: 1 MRIIFMGTPDFAVPALCSLHAAGHEIACVYSQPPSRSG-RGKKLRPSPVHAKADELGIQV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P EE E F + ADVAVV AYGL++PQ IL+A G N HAS+LPRWRGAAP
Sbjct: 60 RTPKSLKPAEEKEAFAALGADVAVVAAYGLILPQAILDAPVHGCLNIHASILPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD+ETG+ IM+M+ LDTGP+ + + P++ + + +
Sbjct: 120 IHRAIMAGDDETGVTIMQMEVGLDTGPMLHIVRTPVNDKTTGELTAELAELGAGAMVEVL 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + PQ ++ TYA KI K E R+++ R A + H+ L+PFPGAW E+
Sbjct: 180 ANFS---HYEAQPQDDSLATYAPKIDKAEARIDWSRPASEIVRHVHGLAPFPGAWFELEG 236
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KLL++ L G PG VI+ F +AC A+R RLQRAG +D DFL G
Sbjct: 237 ----ERVKLLQASLTAGSAHPGTVIDEQFGVACGSDAIRPDRLQRAGKPAMDRDDFLRGR 292
Query: 302 PVIIGCIV 309
PV G ++
Sbjct: 293 PVAQGTVL 300
>gi|15615071|ref|NP_243374.1| methionyl-tRNA formyltransferase [Bacillus halodurans C-125]
gi|20138134|sp|Q9K9Y6|FMT_BACHD RecName: Full=Methionyl-tRNA formyltransferase
gi|10175128|dbj|BAB06227.1| methionyl-tRNA formyltransferase [Bacillus halodurans C-125]
Length = 317
Score = 192 bits (486), Expect = 9e-47, Method: Composition-based stats.
Identities = 103/317 (32%), Positives = 167/317 (52%), Gaps = 14/317 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +F+V L+ L+ ++I +V TQP RP G R V +A++ +P
Sbjct: 1 MKIVFMGTPDFSVPVLRRLIEDGYTIAAVVTQPDRPVG-RKRVLTPPPVKVEAEKHQIPV 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K+ E E+ SF D+ V A+G ++P +L K G N HASLLP++RG AP
Sbjct: 60 LQPEKIRDEAELERLFSFEPDLIVTAAFGQILPNALLEYPKHGCINVHASLLPKYRGGAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I +AI+ G+ ETGI IM M + LD G + VPI+ + + L +LS A + +
Sbjct: 120 IHQAIIDGEKETGITIMYMAEKLDAGDILTQVTVPIADDDHVGSLHNKLSEAGAALLAKT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L + L PQ + T+A I++ + +++ + E ++N IR L P+P A+
Sbjct: 180 IPPLIKGELQSIPQDDQLATFAPNITREKEEIDWRKEGERIYNQIRGLHPWPVAYT---- 235
Query: 242 GNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQ-GAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ V K PG VI F +A A+++ LQ AG + +
Sbjct: 236 LWNGKPMKIWWAEKVSSPKKEAPGTVIALEENGFLVATGDETALKVTDLQPAGKKRMLAR 295
Query: 296 DFLLGC--PVIIGCIVG 310
DFL G + +G ++G
Sbjct: 296 DFLRGAGSQLSVGSVLG 312
>gi|323692063|ref|ZP_08106310.1| methionyl-tRNA formyltransferase [Clostridium symbiosum WAL-14673]
gi|323503863|gb|EGB19678.1| methionyl-tRNA formyltransferase [Clostridium symbiosum WAL-14673]
Length = 312
Score = 192 bits (486), Expect = 9e-47, Method: Composition-based stats.
Identities = 106/313 (33%), Positives = 170/313 (54%), Gaps = 6/313 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV TL+AL+ H + +V TQP +P G RG +++ V +KA E+ +P
Sbjct: 1 MKIVFMGTPDFAVPTLEALIRGGHQVAAVVTQPDKPKG-RGKAVLMTPVKEKAMEYGIPV 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ Q++ + + D VV A+G ++PQRIL + G N HASLLPR+RG+A
Sbjct: 60 YQPARVKQDDEFFQVLKALSPDAVVVTAFGQILPQRILELPRYGCINVHASLLPRYRGSA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ GD ETG+ M MD LDTG + V + + L LS+ ++
Sbjct: 120 PIQWAVINGDRETGVTTMMMDAGLDTGDMLEKIVVELDAKETGGSLFDRLSLAGGELILS 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++K E+ L + Q E G YA + K ++++ R AE + IR L+P+P A+
Sbjct: 180 TLEKAEKGTLVRTKQPEEGACYAGMLDKALGKIDWSRDAEAIERLIRGLNPWPSAYTAFE 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + +G+ + G ++ +F + +G +RI +LQ G + +D F
Sbjct: 240 GRTLKLWEAEVTDECSDGQDEYGRIVKVEKDSFLVKTGKGCLRIRQLQLEGKKRMDTCAF 299
Query: 298 LLGCPVIIGCIVG 310
L G PV G I+G
Sbjct: 300 LRGYPVKEGIILG 312
>gi|259417302|ref|ZP_05741221.1| methionyl-tRNA formyltransferase [Silicibacter sp. TrichCH4B]
gi|259346208|gb|EEW58022.1| methionyl-tRNA formyltransferase [Silicibacter sp. TrichCH4B]
Length = 308
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 150/308 (48%), Positives = 194/308 (62%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT EF+V L ALV + H I +VY QPPRPAG RG K + VH +A+ L
Sbjct: 1 MRVIFMGTPEFSVPVLDALVQAGHEIAAVYCQPPRPAG-RGKKDRPTPVHARAEALGLEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E +F + AD+AVVVAYGL++PQ IL+ K G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKTAEAQSEFTALEADIAVVVAYGLILPQAILDGPKKGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD ETG+ IM+M+ LDTGPV +K I + T+ LQ LSV+ A +VEA
Sbjct: 120 IHRAIMAGDAETGVCIMQMEAGLDTGPVLLRKKTAIGAEEVTSELQDRLSVMGATLIVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ L PQ + G+TYA KI K E ++++ + AE V IR LSPFPGAW E+
Sbjct: 180 LETLPDLRPE--PQPDAGVTYASKIDKSEAQIDWSQPAEEVDRKIRGLSPFPGAWCEVQG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+RIK+L S+L EG+G G V++ N T+AC +GAV ++RLQRAG D FL G
Sbjct: 238 ----QRIKVLASRLAEGKGPAGTVLDENLTVACGKGAVELLRLQRAGKGAQDRETFLRGF 293
Query: 302 PVIIGCIV 309
+ G +
Sbjct: 294 QMHEGMQL 301
>gi|271502214|ref|YP_003335240.1| methionyl-tRNA formyltransferase [Dickeya dadantii Ech586]
gi|270345769|gb|ACZ78534.1| methionyl-tRNA formyltransferase [Dickeya dadantii Ech586]
Length = 313
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 120/317 (37%), Positives = 182/317 (57%), Gaps = 13/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+LR++F GT +FA L AL+SS H +V V+TQP RPAG RG K S V A++ +
Sbjct: 1 MSLRIIFAGTPDFAAQHLAALLSSEHEVVGVFTQPDRPAG-RGNKLTPSPVKVLAEQHGI 59
Query: 61 PALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P L E +Q ++ DV VVVAYGL++PQ +L+ +LG N H SLLPRWRGA
Sbjct: 60 PVFQPKSLRPSENQQIVAGLNADVMVVVAYGLILPQAVLDMPRLGCINVHGSLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRA+ AGD+ TGI IM+MD LDTG + + PI + +A L +L+ L ++
Sbjct: 120 APIQRALWAGDSLTGITIMQMDAGLDTGAMLHKIECPILPDDTSASLYDKLAKLGPQGLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + L + + Q ++ TYAEK+SK E R+N+ SAE + IRA +P+P ++ +
Sbjct: 180 ETLAHLSSSQVTAQVQDDSLATYAEKLSKEEARLNWQLSAEQLERCIRAFNPWPVSYFLV 239
Query: 240 MIGNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +K+ +++ ++ + +PG V+ ++A + G + I LQ +G + +
Sbjct: 240 EE----QPVKVWKAKALDTQHQQQPGTVLAADKEGISVATANGILNIQILQPSGKKAMSA 295
Query: 295 GDFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 296 QDLLNSRREWFIPGNTL 312
>gi|206578225|ref|YP_002236310.1| methionyl-tRNA formyltransferase [Klebsiella pneumoniae 342]
gi|238065929|sp|B5XNC3|FMT_KLEP3 RecName: Full=Methionyl-tRNA formyltransferase
gi|206567283|gb|ACI09059.1| methionyl-tRNA formyltransferase [Klebsiella pneumoniae 342]
Length = 315
Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K + S V A+ +P
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSEHQIVGVFTQPDRPAG-RGKKLMPSPVKVLAEAHDVP 62
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P+ L +E +Q ++ AD+ VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPSSLRPQENQQLVADLGADIMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD+ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDSETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGSLYDKLADLGPQGLLT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E+ ++YAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLAQLANGTAQPEVQDESLVSYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEI- 241
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ + ++ +PG ++ +A G + + LQ AG + +
Sbjct: 242 ---DGQPVKVWRASVIAEVTHAEPGTIVAATKQGIQVATGDGILSLESLQPAGKKAMSSQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 299 DLLNSRREWFIPGTRL 314
>gi|167554204|ref|ZP_02347945.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205321536|gb|EDZ09375.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 315
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 181/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L A+++S H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDAMLTSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E + ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQHLVADLHADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGSLYNKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +T+AEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTATPEAQNEALVTHAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEI- 241
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++E + PG ++ +A +G + ++ LQ AG + +
Sbjct: 242 ---DGQPVKVWQASVIEDATQSLPGTILAATKQGIQVATGKGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 299 DLLNSRREWFIPGNRL 314
>gi|163744869|ref|ZP_02152229.1| methionyl-tRNA formyltransferase [Oceanibulbus indolifex HEL-45]
gi|161381687|gb|EDQ06096.1| methionyl-tRNA formyltransferase [Oceanibulbus indolifex HEL-45]
Length = 304
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 149/308 (48%), Positives = 190/308 (61%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT EF+V L ALV + H I +VY QPPRPAG RG K S V ++A+E L
Sbjct: 1 MRLIFMGTPEFSVPVLDALVQAGHDICAVYCQPPRPAG-RGKKPRPSPVQQRAEEIGLLV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E E+F +AD AVVVAYGL++PQ IL+A K G N HASLLPRWRGAAP
Sbjct: 60 RHPASLKHPEPQEEFSELDADAAVVVAYGLILPQVILDAPKQGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD +TG+ IM+M+ LDTGPV + I + TA L LS + A A+ +A
Sbjct: 120 IHRAIMAGDEKTGVCIMQMEAGLDTGPVLLCEETDIGAAETTAQLHDRLSAMGAVAINKA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L PQ E G+TYA KI K E R+++ R A V IR LSPFPGAW E+
Sbjct: 180 LSQLLTL--TPQPQPEEGVTYAAKIDKAEARIDWARPAVEVDRLIRGLSPFPGAWFEV-- 235
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+R+K+L S L EG G GEV++ + +AC GAVR+ RLQRAG V D+ F G
Sbjct: 236 --DGQRVKVLGSVLDEGTGAAGEVLSDDLRVACGDGAVRLTRLQRAGKGVQDVDVFQRGA 293
Query: 302 PVIIGCIV 309
+ G +
Sbjct: 294 QIATGTNL 301
>gi|225848240|ref|YP_002728403.1| methionyl-tRNA formyltransferase [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643886|gb|ACN98936.1| methionyl-tRNA formyltransferase [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 311
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 108/315 (34%), Positives = 175/315 (55%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT EFAV +L+AL+ S+H +V+V TQP +P G RG K V ++A + ++P
Sbjct: 1 MKVLFWGTPEFAVESLKALIQSNHQVVAVITQPDKPKG-RGQKVQPPPVKEEALKHNIPV 59
Query: 63 LVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K+ + N D++VVVAYG ++P+ I+N K N HASLLP++RGAA
Sbjct: 60 LQPEKIKNNQEFVETIKQLNPDISVVVAYGKILPEEIINIPKYKTINVHASLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAIM G+ ETG+ IM++ K LD G V KV I + L +L+ A ++E
Sbjct: 120 PIQRAIMDGEEETGVCIMEIVKELDAGDVYACTKVKILPEDDIITLHDKLAKEGAKLLIE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+DK+E+ + PQ + TYA+ I K E ++++ + A+++ N +RAL +P A+
Sbjct: 180 VLDKIEKGQIEKVPQDHSKATYAKPIEKEEGKIDWNKPAKDIFNQVRALKVWPKAFANFR 239
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+K+L ++++ EGKPGE++ + G + I +Q + +
Sbjct: 240 DFQ----VKILNVEVLKECKEGKPGEILKASDKEGIVVKTKDGCLLIRTIQFPNSKPISS 295
Query: 295 GDFLLGCPVIIGCIV 309
+ + G + G
Sbjct: 296 QEAVRGYRIKEGEKF 310
>gi|313893395|ref|ZP_07826967.1| methionyl-tRNA formyltransferase [Veillonella sp. oral taxon 158
str. F0412]
gi|313442036|gb|EFR60456.1| methionyl-tRNA formyltransferase [Veillonella sp. oral taxon 158
str. F0412]
Length = 336
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 96/333 (28%), Positives = 165/333 (49%), Gaps = 29/333 (8%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VFMGT +F+V TL+AL+ + H+IV VY QP + G RG + + V A + +LP
Sbjct: 6 PLRIVFMGTPDFSVPTLEALIHAGHTIVGVYCQPDKQKG-RGKQVQMPPVKVAALKHNLP 64
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ + + DV VV+AYG ++P ++ + G N HAS+LP++RGAA
Sbjct: 65 VYQPVTLRDEQVQAELEALRPDVVVVIAYGKILPPWLIRLPQYGCINVHASVLPKYRGAA 124
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ GD +TG+ IM MD LDTG + + + I T L + ++VL +V
Sbjct: 125 PIHYAILNGDTKTGVTIMHMDDGLDTGDIIDIVETDILPGETTGQLFERIAVLGGETIVP 184
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + +PQ + T+ KI+K ++++ + A + N IR L+P PG + +
Sbjct: 185 VLTRWVNGEIVATPQDDTMATHTAKITKEMGQIDWSKPANEIVNLIRGLNPAPGCYTYL- 243
Query: 241 IGNKHERIKLLESQLVEGEGK--------------------PGEVIN--PNFTIACSQG- 277
+R+K+ ++V + PG +++ + C G
Sbjct: 244 ---DGKRLKIWSGEVVPSDTTHCLIDIRGKHVPIAISATTVPGTIVSKIDGLGVFCGDGN 300
Query: 278 AVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ + +Q + + DF+ G + G + G
Sbjct: 301 IILLTEVQPENKKRISATDFINGHQIKEGIVFG 333
>gi|319403560|emb|CBI77142.1| Methionyl-tRNA formyltransferase [Bartonella rochalimae ATCC
BAA-1498]
Length = 309
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 151/307 (49%), Positives = 200/307 (65%), Gaps = 2/307 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR+ FMGT F+V L AL+ + H IV+VY+QPPRPAGRRGLK S V AQE S+
Sbjct: 1 MALRLSFMGTPNFSVPILHALLEAGHDIVAVYSQPPRPAGRRGLKLFPSPVQIAAQEKSI 60
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P EE +F + DVAVVVAYGL++P+ IL A + G +N HASLLPRWRGA
Sbjct: 61 PVFTPQTLKTTEEQIKFAELSVDVAVVVAYGLLLPKPILEAPRFGCFNAHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMA D ETG+ IMKMD+ LDTGP+A + I+ N+ L ++LS + A ++
Sbjct: 121 APIQRAIMANDQETGMMIMKMDEGLDTGPIALSHSIAITDNMTAYELSEKLSHIGAKLII 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + LE+N L L+PQ G+TYA KI K ET++++ +SA+ +H HI ALSP PG W M
Sbjct: 181 DTLSALEKNQLKLTPQSSKGVTYAVKIKKEETQIDWTQSAKFIHKHICALSPTPGCWCNM 240
Query: 240 MIGNKHERIKLLESQLVEGEG-KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
I K ER+K+L S+L+E + G++ I C QG + I LQR+GG++LD FL
Sbjct: 241 NINGKQERVKILGSRLIEKRSIEIGKIEPEQLIIHCGQGCIEITHLQRSGGKLLDRATFL 300
Query: 299 LGCPVII 305
G +
Sbjct: 301 RGANISA 307
>gi|238752658|ref|ZP_04614129.1| Methionyl-tRNA formyltransferase [Yersinia rohdei ATCC 43380]
gi|238709085|gb|EEQ01332.1| Methionyl-tRNA formyltransferase [Yersinia rohdei ATCC 43380]
Length = 320
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 174/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K S V A++ +P
Sbjct: 9 SLRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAG-RGNKLTSSPVKVLAEQHDIP 67
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE + ++ D+ VVVAYGL++P +L +LG N H SLLPRWRGAA
Sbjct: 68 VFQPKSLRPEENQHLVADLNADIMVVVAYGLILPASVLAMPRLGCINVHGSLLPRWRGAA 127
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD +TG+ IM+MD LDTG + + I +A L +L+ L ++
Sbjct: 128 PIQRSLWAGDAKTGVTIMQMDIGLDTGDMLHKIECDIQPEDTSATLYDKLAELGPQGLLV 187
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L N Q E +TYAEK+SK E ++++ SA + IRA +P+P ++ +
Sbjct: 188 TLQQLAAGNARPEVQDEAQVTYAEKLSKEEAKLDWSLSAIQLERCIRAFNPWPVSYFVVE 247
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++Q+++ PG VI +A ++G + I +LQ AG + +
Sbjct: 248 E----QPVKVWQAQVIDTTENAAPGTVIHADKHGIQVATAEGVLNITQLQPAGKKPMSAA 303
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 304 DLLNSRREWFTPGSQL 319
>gi|306830709|ref|ZP_07463874.1| methionyl-tRNA formyltransferase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304427217|gb|EFM30324.1| methionyl-tRNA formyltransferase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 316
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 99/316 (31%), Positives = 163/316 (51%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ A L L+ S++ +++V TQP R G R + ++ V + A +
Sbjct: 6 MT-KLIFMGTPDFSAAVLNGLLDDSNYDVLAVVTQPDRAVG-RKKEIKMTPVKEVALAHN 63
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P K+ E L +V A L + N HASLLP++RG
Sbjct: 64 LPVYQPEKMSGSEEMAELMTLGADGIVTAAFGQFLPTKLLDSVDFAVNVHASLLPKYRGG 123
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G+ E G+ IM+M K +D G + PI+ + N + ++L+V+ ++
Sbjct: 124 APIHYAIINGEEEAGVTIMEMVKKMDAGDMIAKASTPITDDDNVGTMFEKLAVIGRDLLL 183
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ N+ PQ E+ T++ I+ E R+++ +SA +V NHIR L P+P A +
Sbjct: 184 RTLPDYIAGNIKPEPQDESKATFSPNITPEEERIDWNKSARDVFNHIRGLYPWPVAHTLL 243
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E+ L EG G+PGE+I +A GA+ + +Q AG + + D
Sbjct: 244 ----DGKRFKIYEATLAEGHGRPGEIIEKGKKSLVVATGDGAISLKTVQPAGKPRMSVVD 299
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G ++G
Sbjct: 300 FLNGVGRKLEVGDLIG 315
>gi|205354965|ref|YP_002228766.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|238690544|sp|B5RH48|FMT_SALG2 RecName: Full=Methionyl-tRNA formyltransferase
gi|205274746|emb|CAR39802.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326630114|gb|EGE36457.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
Length = 315
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 115/307 (37%), Positives = 179/307 (58%), Gaps = 11/307 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL++S H++V V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLTSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQQLVADLHADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGSLYNKLAELGPQGLIT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +T+AEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLKQLADGTAAPEAQNEALVTHAEKLSKEEARIDWSLSAVQLERCIRAFNPWPMSWLEI- 241
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++E + PG ++ +A +G + ++ LQ AG + +
Sbjct: 242 ---DGQPVKVWQASVIEDATQSLPGTILAATKQGIQVATGKGILNLLSLQPAGKKAMSAQ 298
Query: 296 DFLLGCP 302
D L
Sbjct: 299 DLLNSRR 305
>gi|238792968|ref|ZP_04636598.1| Methionyl-tRNA formyltransferase [Yersinia intermedia ATCC 29909]
gi|238727822|gb|EEQ19346.1| Methionyl-tRNA formyltransferase [Yersinia intermedia ATCC 29909]
Length = 320
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 175/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K S V A++ +P
Sbjct: 9 SLRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAG-RGNKLTPSPVKILAEQHGIP 67
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P L EE + ++ D+ VVVAYGL++P +L +LG N H SLLPRWRGAA
Sbjct: 68 VLQPKSLKPEENQHLVADLNADIMVVVAYGLILPASVLAMPRLGCINVHGSLLPRWRGAA 127
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD +TG+ IM+MD LDTG + + I +A L +L+ L ++
Sbjct: 128 PIQRAVWAGDAKTGVTIMQMDVGLDTGDMLHKIECDIQPEDTSATLYDKLAQLGPQGLLV 187
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + + Q E +TYAEK+SK E ++++ SA + IRA +P+P ++ +
Sbjct: 188 TLQQLAEGSTQPEVQNEAQVTYAEKLSKEEAKLDWSLSAVQLERCIRAFNPWPVSYFVV- 246
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ ++Q+ + KPG +I +A + G + I +LQ AG + +
Sbjct: 247 ---DEQPIKVWQAQVFAAVEDIKPGTIIHADKHGIQVATADGVLNITQLQPAGKKAMSAA 303
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 304 DLLNSRREWFTPGSQL 319
>gi|332976421|gb|EGK13269.1| methionyl-tRNA formyltransferase [Desmospora sp. 8437]
Length = 314
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 107/314 (34%), Positives = 162/314 (51%), Gaps = 12/314 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R+VFMGT +FAV +LQ LV + + V TQP RP G R + V A E LP
Sbjct: 6 RMVFMGTPDFAVPSLQTLVREGYRVAGVVTQPDRPRG-RKRELTPPPVKVAAMELGLPVF 64
Query: 64 VPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P + E + L + D+ V AYG ++P+ IL + G N HASLLP++RG API
Sbjct: 65 QPERLRNPENVRRLLEWKPDLIVTAAYGQILPREILETPRYGCINVHASLLPKYRGGAPI 124
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ ETG+ IM M + LD G + R +PI + L +L+ + A + E +
Sbjct: 125 HHALIRGEKETGVTIMYMVEALDAGDMLAHRSIPIEEADDVGTLHDKLARVGAQLLRETV 184
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
L + + PQ ++ TYA I + + R+++ RSA + N IR L P+P A+
Sbjct: 185 PALLEGRVQPVPQDDSQATYAPNIRREDERIDWSRSAWELVNQIRGLRPWPVAFT----L 240
Query: 243 NKHERIKLLESQLVEG--EGKPGEVIN---PNFTIACSQ-GAVRIMRLQRAGGRVLDIGD 296
K + +K+ ++ V G PG V++ +A + GA+ I LQ AG R + +
Sbjct: 241 WKGKPLKIWRAEPVPGREAAAPGTVLSQTEEGVIVAAGEGGALCIQELQPAGKRRMTAAE 300
Query: 297 FLLGCPVIIGCIVG 310
F G + G I+G
Sbjct: 301 FYRGRQMEPGEILG 314
>gi|290512101|ref|ZP_06551469.1| methionyl-tRNA formyltransferase [Klebsiella sp. 1_1_55]
gi|289775891|gb|EFD83891.1| methionyl-tRNA formyltransferase [Klebsiella sp. 1_1_55]
Length = 315
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K + S V A+ +P
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSEHQIVGVFTQPDRPAG-RGKKLMPSPVKVLAEAHDVP 62
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P+ L +E +Q ++ AD+ VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPSSLRPQENQQLVADLGADIMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD+ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDSETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGSLYDKLAGLGPQGLLT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E+ ++YAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLAQLANGTAQPEVQDESLVSYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEI- 241
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ + ++ +PG ++ +A G + + LQ AG + +
Sbjct: 242 ---DGQPVKVWRASVIAEATHAEPGTIVAATKQGIQVATGDGILSLESLQPAGKKAMSSQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 299 DLLNSRREWFIPGTRL 314
>gi|288933299|ref|YP_003437358.1| methionyl-tRNA formyltransferase [Klebsiella variicola At-22]
gi|288888028|gb|ADC56346.1| methionyl-tRNA formyltransferase [Klebsiella variicola At-22]
Length = 315
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K + S V A+ +P
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSEHQIVGVFTQPDRPAG-RGKKLMPSPVKVLAEAHDVP 62
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P+ L +E +Q ++ AD+ VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPSSLRPQENQQLVADLGADIMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD+ETG+ IM+MD LDTG + + PI++ + L +L+ L ++
Sbjct: 123 PIQRSLWAGDSETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGSLYDKLAGLGPQGLLT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E+ ++YAEK+SK E R+++ SA + IRA +P+P +WLE+
Sbjct: 183 TLAQLANGTAQPEVQDESLVSYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEI- 241
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ + ++ +PG ++ +A G + + LQ AG + +
Sbjct: 242 ---DGQPVKVWRASVIAEVTHAEPGTIVAATKQGIQVATGDGILSLESLQPAGKKAMSSQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 299 DLLNSRREWFIPGTRL 314
>gi|317498699|ref|ZP_07956991.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
gi|316894041|gb|EFV16231.1| methionyl-tRNA formyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 309
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 111/314 (35%), Positives = 173/314 (55%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ VFMGT EFAV TLQAL+ H +++V TQP + G RG K V +KA E+ +P
Sbjct: 1 MKAVFMGTPEFAVPTLQALID-HHEVLAVVTQPDKQRG-RGKKMQFPPVKEKAVEYDIPV 58
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + EE+ + L N DV VVVAYG ++P+ ILN K G N H SLLP++RGAAP
Sbjct: 59 YQPQRARDEEFIEELKNLNPDVIVVVAYGQILPESILNIPKYGCINVHGSLLPKYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ +TGI M M+K LDTG + +V + L +L VL A+ ++E
Sbjct: 119 IQWAVLDGEEKTGITTMYMEKGLDTGDMIDKAEVVLDKKETAGSLHDKLMVLGANLLLET 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ KLE Q + YA+ +SK +++F +SA + IR ++P+P A+ +
Sbjct: 179 LKKLEDGTAVREKQNDEESCYAKMLSKDMGQIDFTKSAREIECLIRGMNPWPSAYTSL-- 236
Query: 242 GNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ E+ +++ + K PG ++ +A + + +Q AG + + +
Sbjct: 237 --DGKTMKVWEADVLDAQSKEEPGTIVEVNKKEIIVATGSNDLALHEIQLAGKKRMQVQA 294
Query: 297 FLLGCPVIIGCIVG 310
FLLG V G +G
Sbjct: 295 FLLGYQVEAGTKLG 308
>gi|152994059|ref|YP_001338894.1| methionyl-tRNA formyltransferase [Marinomonas sp. MWYL1]
gi|150834983|gb|ABR68959.1| methionyl-tRNA formyltransferase [Marinomonas sp. MWYL1]
Length = 332
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 120/324 (37%), Positives = 174/324 (53%), Gaps = 17/324 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALV--------SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHK 53
LR++F GT EFA A+LQAL+ + + IV VYTQP RPAG RG K V S V +
Sbjct: 5 PLRIIFAGTPEFAAASLQALLTKMKDSNAENQYEIVGVYTQPDRPAG-RGQKLVQSPVKQ 63
Query: 54 KAQEFSLPALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
A +P P E+ Q + AD+ +V AYG+++P+ +L+ K G N HASL
Sbjct: 64 LAIVNDIPVYQPLNFKQDEDKAQLAALEADLMIVAAYGIILPKVVLDTPKFGCINVHASL 123
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI R+++AGD ETGI IM+MD LDTG + I + L L+V
Sbjct: 124 LPRWRGAAPIHRSLIAGDGETGITIMQMDVGLDTGDMLLKAYCDIKPTDTSETLHDRLAV 183
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
L ++EA++K + L Q E+ YA K++K E VN+ SAE + IR LSP+
Sbjct: 184 LGGSTLIEALEKFKAGTLVPEQQDESLTCYAAKLTKQEGNVNWSSSAELIERQIRGLSPW 243
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGG 289
P A+ + + + + + PG+++ +A QG++ I +Q AGG
Sbjct: 244 PVAYTN-SLAGVMKIHAAHIASVSDEASTPGDILVVSKEGIIVATGQGSILITEIQFAGG 302
Query: 290 RVLDIGDFLLGCP---VIIGCIVG 310
+ + + D L G + IG +G
Sbjct: 303 KRMKVQDALNGKNKAALEIGQRLG 326
>gi|326388514|ref|ZP_08210108.1| methionyl-tRNA formyltransferase [Novosphingobium nitrogenifigens
DSM 19370]
gi|326206979|gb|EGD57802.1| methionyl-tRNA formyltransferase [Novosphingobium nitrogenifigens
DSM 19370]
Length = 369
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 136/310 (43%), Positives = 187/310 (60%), Gaps = 9/310 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+RVVFMGT +FAV TL+AL+++ H +V+VY+QPPRPAG RG K S VH+ A+E +
Sbjct: 68 PMRVVFMGTPDFAVPTLRALLAAGHEVVAVYSQPPRPAG-RGKKLQASPVHRAAEEAGIA 126
Query: 62 ALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + G EE F + ADVAVV AYGL++PQ +L+A +LG N H S+LPRWRGAA
Sbjct: 127 VFTPLSLKGAEEQAAFAAHGADVAVVAAYGLILPQAVLDAPRLGCLNVHGSILPRWRGAA 186
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRAI+AGD ETG+ IM+MD+ LDTGP+ + + A +
Sbjct: 187 PVQRAILAGDAETGVTIMQMDRGLDTGPMLAKVVTGVDGKTAGELATELAEAGAALMVTV 246
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
D P Q E G+TYA KI K E+R++F SA ++ +RA +P PGA+ E
Sbjct: 247 LADLSA---YPAVVQPEEGVTYAAKIDKAESRLDFALSALDLERRVRAFAPAPGAFFEFE 303
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
ER ++L +Q+V GEG+PG VI+ IAC +GA+R +QRAG +D L G
Sbjct: 304 G----ERYRVLAAQVVAGEGEPGSVIDDTLAIACGEGALRPTLVQRAGRPAMDTAALLRG 359
Query: 301 CPVIIGCIVG 310
+ +G +G
Sbjct: 360 RAIPVGTRIG 369
>gi|163867375|ref|YP_001608569.1| hypothetical protein Btr_0078 [Bartonella tribocorum CIP 105476]
gi|189044500|sp|A9ILK1|FMT_BART1 RecName: Full=Methionyl-tRNA formyltransferase
gi|161017016|emb|CAK00574.1| Methionyl-tRNA formyltransferase [Bartonella tribocorum CIP 105476]
Length = 309
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 151/307 (49%), Positives = 199/307 (64%), Gaps = 2/307 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR+ FMGT +F+V L AL+ + H +V+VY+QPPRPAGRR LK + S V A+E S+
Sbjct: 1 MALRLSFMGTPDFSVPILHALLDAGHDVVAVYSQPPRPAGRRRLKLIPSPVQNAAEERSI 60
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P E+ QF + + D A+VVAYGL++P+ IL + G +N HASLLPRWRGA
Sbjct: 61 PTFTPQTLKTAEQQAQFAALSVDAAIVVAYGLLLPKAILETPRFGCFNAHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD ETG+ IMKMD+ LDTG + R +PI+ T L ELS + A M+
Sbjct: 121 APIQRAIMAGDKETGMMIMKMDEGLDTGSIVLSRSIPITDTTTTDKLSNELSYIGAELMI 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + LE+ L L PQ + GITYA KI K ETR+++ + AE +H HIRALSP PG W M
Sbjct: 181 ETLSTLEKGQLKLIPQSKEGITYAAKIKKEETRIDWKKPAEFIHRHIRALSPSPGCWCNM 240
Query: 240 MIGNKHERIKLLESQLVEGEG-KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
IG + ER+K+LES+L G + G + + + C QG + I LQR+GG++LD FL
Sbjct: 241 NIGGREERVKILESRLATGTSLEIGRIEPNSLIVHCGQGRIEITTLQRSGGKILDSATFL 300
Query: 299 LGCPVII 305
G +
Sbjct: 301 RGAHISA 307
>gi|167768545|ref|ZP_02440598.1| hypothetical protein CLOSS21_03104 [Clostridium sp. SS2/1]
gi|167710069|gb|EDS20648.1| hypothetical protein CLOSS21_03104 [Clostridium sp. SS2/1]
gi|291560507|emb|CBL39307.1| methionyl-tRNA formyltransferase [butyrate-producing bacterium
SSC/2]
Length = 309
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 111/314 (35%), Positives = 172/314 (54%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ VFMGT EFAV TLQAL+ H +++V TQP + G RG K V +KA E+ +P
Sbjct: 1 MKAVFMGTPEFAVPTLQALID-HHEVLAVVTQPDKQRG-RGKKMQFPPVKEKAVEYDIPV 58
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + EE+ + L N DV VVVAYG ++P+ ILN K G N H SLLP++RGAAP
Sbjct: 59 YQPQRARDEEFIEELKNLNPDVIVVVAYGQILPESILNIPKYGCINVHGSLLPKYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ +TGI M M+K LDTG + +V + L +L VL A ++E
Sbjct: 119 IQWAVLDGEEKTGITTMYMEKGLDTGDMIDKAEVVLDKKETAGSLHDKLMVLGADLLLET 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ KLE Q + YA+ +SK +++F +SA + IR ++P+P A+ +
Sbjct: 179 LKKLEDGTAVREKQNDEESCYAKMLSKDMGQIDFTKSAREIECLIRGMNPWPSAYTSL-- 236
Query: 242 GNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ E+ +++ + K PG ++ +A + + +Q AG + + +
Sbjct: 237 --DGKTMKVWEADVLDAQSKEEPGTIVEVNKKEIIVATGSNDLALHEIQLAGKKRMQVQA 294
Query: 297 FLLGCPVIIGCIVG 310
FLLG V G +G
Sbjct: 295 FLLGYQVEAGTKLG 308
>gi|308173536|ref|YP_003920241.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens DSM 7]
gi|307606400|emb|CBI42771.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens DSM 7]
gi|328553531|gb|AEB24023.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens TA208]
gi|328911677|gb|AEB63273.1| methionyl-tRNA formyltransferase [Bacillus amyloliquefaciens LL3]
Length = 317
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 110/317 (34%), Positives = 166/317 (52%), Gaps = 13/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT R+VFMGT +F+V L+ L+ + + V TQP RP G R V +A+ +
Sbjct: 1 MT-RIVFMGTPDFSVPVLRTLIEDGYEVAGVVTQPDRPKG-RKKIMTPPPVKAEAERHGI 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P K+ +EE E+ LS D+ V A+G ++P+++L+ K G N HASLLP RG
Sbjct: 59 PVLQPEKVRLEEEIEKVLSLKPDLIVTAAFGQILPKQLLDGPKYGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +I+ G +TG+ IM M + LD G + +V I N L +LSV A +
Sbjct: 119 APIHYSILQGKKKTGVTIMYMVEKLDAGDMISKIEVEIDETDNVGTLHDKLSVAGAKLLS 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + N+ Q E+ TYA I + + R+++ + E+++N IR L+P+P A+ +
Sbjct: 179 ETVPNVISGNIKPIRQDESKATYAPNIKREQERIDWTKPGEDIYNQIRGLNPWPVAYTTL 238
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVIN---PNFTIACSQG-AVRIMRLQRAGGRVLD 293
N IK+ S+ V E PG VI +A G A+ I LQ AG + +
Sbjct: 239 NGQN----IKVWASEKVAANTEAAPGTVIRAEQNGIVVASGNGTALLITELQPAGKKRMK 294
Query: 294 IGDFLLGCPVIIGCIVG 310
DF+ G V G ++G
Sbjct: 295 GEDFVRGKNVQSGDVLG 311
>gi|163941604|ref|YP_001646488.1| methionyl-tRNA formyltransferase [Bacillus weihenstephanensis
KBAB4]
gi|229013050|ref|ZP_04170215.1| Methionyl-tRNA formyltransferase [Bacillus mycoides DSM 2048]
gi|229168606|ref|ZP_04296329.1| Methionyl-tRNA formyltransferase [Bacillus cereus AH621]
gi|229487438|sp|A9VTA4|FMT_BACWK RecName: Full=Methionyl-tRNA formyltransferase
gi|163863801|gb|ABY44860.1| methionyl-tRNA formyltransferase [Bacillus weihenstephanensis
KBAB4]
gi|228615012|gb|EEK72114.1| Methionyl-tRNA formyltransferase [Bacillus cereus AH621]
gi|228748304|gb|EEL98164.1| Methionyl-tRNA formyltransferase [Bacillus mycoides DSM 2048]
Length = 314
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 104/313 (33%), Positives = 162/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + +V V TQP RP G R + V +A++ +P
Sbjct: 2 MKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P ++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 VQPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + +++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQSEAEVTFAYNIKREQEIIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E + + +PG ++ F +A V+I LQ +G + + F
Sbjct: 240 -GQVIKVWWGEKVSITEKAEPGTIVALEEDGFVVATGNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|307244480|ref|ZP_07526589.1| methionyl-tRNA formyltransferase [Peptostreptococcus stomatis DSM
17678]
gi|306492173|gb|EFM64217.1| methionyl-tRNA formyltransferase [Peptostreptococcus stomatis DSM
17678]
Length = 309
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 98/313 (31%), Positives = 164/313 (52%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT E AV +L+ L+S H + +V TQP RP G RG K S V + A L
Sbjct: 1 MRIVFMGTPEIAVPSLERLISDGHDVCAVVTQPDRPKG-RGKKLAFSPVKEAAMRHQLEI 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K + + N D+ VV+A+G ++ + +L+ K G N H SLLP++RGAAP
Sbjct: 60 LQPEKADQPDFLNRLNELNPDLIVVIAFGQILKKEVLDLPKYGCVNVHVSLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I I+ G+ TGI M MD+ LDTG + ++ + + IN L ++ A + +
Sbjct: 120 INWVIINGEERTGITTMYMDEGLDTGDIIQTKEFSLDNEINAGQLHDKMMDEGADLLSQT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E + + Q ++ TYA + K +NF +SA +HN +R P+PGAW E
Sbjct: 180 VKAIEDGSANRTKQNDDESTYAPMMDKDLGHINFKKSAVCIHNLVRGTVPWPGAWCE--- 236
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + +IK+ ++ + + + PG ++ +AC G + I +Q + + + +
Sbjct: 237 -SPYGKIKIWKTSISQNQTGKDPGTIVAVDKQGIEVACGVGVILIEEIQMPNKKRMHVSE 295
Query: 297 FLLGCPVIIGCIV 309
++ G + G I+
Sbjct: 296 YIKGNTIETGKIL 308
>gi|229826166|ref|ZP_04452235.1| hypothetical protein GCWU000182_01538 [Abiotrophia defectiva ATCC
49176]
gi|229789036|gb|EEP25150.1| hypothetical protein GCWU000182_01538 [Abiotrophia defectiva ATCC
49176]
Length = 313
Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats.
Identities = 100/307 (32%), Positives = 174/307 (56%), Gaps = 9/307 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMGT +FA A+L+AL+ S H I++V TQP +P GR+G + V A E +
Sbjct: 1 MKVIFMGTPDFAAASLEALIDSEHEILAVVTQPDKPKGRKG-ELTPPTVKTIAVEKGIKV 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ + E+ E + DV VV+A+G +IP+ IL K G N H SLLP++RGAAP
Sbjct: 60 YQPVKVREPEFVEIIRDYKPDVIVVIAFGQIIPESILEIPKYGCVNIHGSLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ E+G+ M MDK +DTG + + + ++ + + L +L L A ++E
Sbjct: 120 IQWAVLDGEKESGVTSMLMDKGIDTGDILLKKSIKLAEDETSGSLFDKLMALGAETLLET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ LE+ ++ Q ++ YA+ ++K ++F R+A + +R ++P+P A+ +
Sbjct: 180 LEGLEKGSITPEKQGDSPTDYAKMLTKDMGLIDFTRTAAELDCFVRGMNPWPSAYTTLGG 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ +K+ ++ V +GK G V+ +F + C + A+ I +Q G + + GDFL
Sbjct: 240 ----KTLKIWRAKPVAEKGKAGSVLRVGKDSFVVGCGENALEIFEVQLEGKKRMPAGDFL 295
Query: 299 LGCPVII 305
G +
Sbjct: 296 KGTHIEA 302
>gi|255525652|ref|ZP_05392585.1| methionyl-tRNA formyltransferase [Clostridium carboxidivorans P7]
gi|296185412|ref|ZP_06853822.1| methionyl-tRNA formyltransferase [Clostridium carboxidivorans P7]
gi|255510638|gb|EET86945.1| methionyl-tRNA formyltransferase [Clostridium carboxidivorans P7]
gi|296050246|gb|EFG89670.1| methionyl-tRNA formyltransferase [Clostridium carboxidivorans P7]
Length = 310
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 98/315 (31%), Positives = 170/315 (53%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT +FAV +L+ L+ ++ +V+TQP +P G RG K +SAV + A ++ +P
Sbjct: 1 MNIVFMGTPDFAVPSLKKLIE-KFNVTAVFTQPDKPKG-RGKKLGMSAVKEVAVQYDIPV 58
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL ++ E + N D VVVAYG ++ + +L+ K G N HASLLP++RGAA
Sbjct: 59 YQPEKLRKDIEALESLKNINPDFIVVVAYGQILTKEVLDTPKYGCINLHASLLPKYRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ E+G M MD LDTG + V I+ ++ L L + +V
Sbjct: 119 PINWAIINGEKESGNTTMFMDIGLDTGDMLLKSHVDITEDMTAGELHDILMEDGSELLVR 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ +E + Q ++ YA ++K ++++ S + N IR L+P+P A+ +
Sbjct: 179 TLEGIEDKTIKREKQGDSTTAYAAMLNKDMAKIDWNLSNREIKNLIRGLNPWPIAYTQYE 238
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
N K+ E+ +++ PG VI+ +AC +G++ + +Q GG+ + +
Sbjct: 239 GKNM----KIYEASILDENSNYNPGYVIDVCNEGIKVACKEGSILLTNIQFPGGKPMKVS 294
Query: 296 DFLLGCPVIIGCIVG 310
+++ G + G +G
Sbjct: 295 EYIRGHKLNKGITLG 309
>gi|145642284|ref|ZP_01797849.1| methionyl-tRNA formyltransferase [Haemophilus influenzae R3021]
gi|145273040|gb|EDK12921.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 22.4-21]
Length = 318
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 112/318 (35%), Positives = 182/318 (57%), Gaps = 10/318 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQA+++S H++++VYTQ +PAG RG K S V + A++ +
Sbjct: 1 MKSLNIIFAGTPDFAAQHLQAILNSQHNVIAVYTQSDKPAG-RGKKLQASPVKQLAEQNN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ P L +EE + L DV VVVAYGL++P+ +L+A +LG N H S+LPRWRG
Sbjct: 60 IRVYQPKSLRKEEAQSELKALNADVMVVVAYGLILPKAVLDAPRLGCLNVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQR+I AGD +TG+ IM+MD+ LDTG + I + L +L+ L A+
Sbjct: 120 AAPIQRSIWAGDVQTGVTIMQMDEGLDTGDMLHKVYCDILPTETSTSLYNKLAELAPSAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ +D LE + Q + YAEK+SK E ++++ A + +IRA +P+P A+
Sbjct: 180 IDVLDNLENSKFIAEKQDGSQSNYAEKLSKEEAQLDWSLPAMQLERNIRAFNPWPIAYFS 239
Query: 239 MMIGN-KHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + +K+ +++++ + KP G ++ IA G + +++LQ AG + +
Sbjct: 240 TEDKDGNAQTLKVYQAEVLPHQDKPAGTILSADKNGIQIATVDGILNLLQLQPAGKKPMS 299
Query: 294 IGDFLLGCP--VIIGCIV 309
D L G IG ++
Sbjct: 300 AQDLLNGRAEWFAIGKVL 317
>gi|26986812|ref|NP_742237.1| methionyl-tRNA formyltransferase [Pseudomonas putida KT2440]
gi|33516857|sp|Q88RR2|FMT_PSEPK RecName: Full=Methionyl-tRNA formyltransferase
gi|24981408|gb|AAN65701.1|AE016196_12 methionyl-tRNA formyltransferase [Pseudomonas putida KT2440]
Length = 310
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 120/314 (38%), Positives = 173/314 (55%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L+AL+ S + IV+VYTQP RPAG RG K + SAV A +P
Sbjct: 1 MRIVFAGTPEFAAEHLKALLDSPYEIVAVYTQPDRPAG-RGQKLMPSAVKALAVAHDIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAAP
Sbjct: 60 FQPQTLRNADAQAELAALKPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+ AGD E+G+ +M+M+ LDTGP+ PIS+ L L+ + A+V+A
Sbjct: 120 IQRAVEAGDAESGVTVMRMEAGLDTGPMLLKVVTPISAEDTGGTLHDRLAEMGPPAVVQA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L +L Q + TYA K++K E R+++ A + IRA +P+P +
Sbjct: 180 IAGLADGSLQGEIQDDALATYAHKLNKDEARIDWTHPAVELERLIRAFNPWPVCHSTL-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
E +K+L + L G+G PGE++ +AC A+ + RLQ GG+ L D
Sbjct: 238 --DGESVKVLAANLSTGQGAPGEILSASKDGLVVACGDQALSLTRLQLPGGKALSFSDLF 295
Query: 299 LGCP--VIIGCIVG 310
G ++G
Sbjct: 296 NSRREKFAAGKVLG 309
>gi|319406473|emb|CBI80114.1| Methionyl-tRNA formyltransferase [Bartonella sp. 1-1C]
Length = 309
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 151/307 (49%), Positives = 199/307 (64%), Gaps = 2/307 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR+ FMGT F+V L AL+ + H IV+VY+QPPRPAGRRGLK S V AQE S+
Sbjct: 1 MALRLSFMGTPNFSVPILHALLEAGHDIVAVYSQPPRPAGRRGLKLFPSPVQIAAQEKSI 60
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P EE +F + DVAVVVAYGL++P+ IL + G +N HASLLPRWRGA
Sbjct: 61 PVFTPQTLKTTEEQIKFAELSVDVAVVVAYGLLLPKPILETPRFGCFNAHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMA D ETG+ IMKMD+ LDTGP+A + I+ N+ L ++LS + A ++
Sbjct: 121 APIQRAIMANDQETGMMIMKMDEGLDTGPIALSHSIAITDNMTAYELSEQLSHIGAKLII 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + LE+N L L+PQ G+TYA KI K ET++++ +SA+ +H HI ALSP PG W M
Sbjct: 181 DTLSALEKNQLKLTPQSSKGVTYAVKIKKEETQIDWTQSAKFIHKHICALSPTPGCWCNM 240
Query: 240 MIGNKHERIKLLESQLVEGEG-KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
I K ER+K+L S+L+E + G++ I C QG + I LQR+GGR+LD FL
Sbjct: 241 NINGKQERVKILGSRLIEKRSIEIGKIEPEQLIIHCGQGCIEITHLQRSGGRLLDRATFL 300
Query: 299 LGCPVII 305
G +
Sbjct: 301 RGANISA 307
>gi|328877395|pdb|3R8X|A Chain A, Crystal Structure Of Methionyl-Trna Formyltransferase From
Yersinia Pestis Complexed With L-Methionine
Length = 318
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 172/316 (54%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K S V A+ +P
Sbjct: 7 SLRIIFAGTPDFAARHLGALLSSQHKIVGVFTQPDRPAG-RGNKLTPSPVKILAEHHGIP 65
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE + ++ D+ VVVAYGL++P +L +LG N H SLLPRWRGAA
Sbjct: 66 VFQPKSLRPEENQHLVADLNADIMVVVAYGLILPAAVLAMPRLGCINVHGSLLPRWRGAA 125
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD +TGI IM+MD LDTG + + I +A L +L+ L ++
Sbjct: 126 PIQRSVWAGDEKTGITIMQMDIGLDTGAMLHKIECAIQPEDTSATLYDKLAQLGPQGLLI 185
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E TYAEK+SK E ++++ SA + IRA +P+P ++ +
Sbjct: 186 TLQQLAAGTALAEVQNETQATYAEKLSKEEAKLDWTLSATQLERCIRAFNPWPVSYFIV- 244
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ ++Q++ + +PG +I +A + G + I +LQ AG + +
Sbjct: 245 ---DEQPIKVWQAQVLPAGEDAEPGTIIHADKHGIQVATADGVLNITQLQPAGKKAMSAA 301
Query: 296 DFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 302 DLLNSRREWFIPGSQL 317
>gi|22127892|ref|NP_671315.1| methionyl-tRNA formyltransferase [Yersinia pestis KIM 10]
gi|45440099|ref|NP_991638.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Microtus
str. 91001]
gi|51597956|ref|YP_072147.1| methionyl-tRNA formyltransferase [Yersinia pseudotuberculosis IP
32953]
gi|108809223|ref|YP_653139.1| methionyl-tRNA formyltransferase [Yersinia pestis Antiqua]
gi|108813988|ref|YP_649755.1| methionyl-tRNA formyltransferase [Yersinia pestis Nepal516]
gi|145597482|ref|YP_001161557.1| methionyl-tRNA formyltransferase [Yersinia pestis Pestoides F]
gi|150260711|ref|ZP_01917439.1| methionyl-tRNA formyltransferase [Yersinia pestis CA88-4125]
gi|153948316|ref|YP_001402831.1| methionyl-tRNA formyltransferase [Yersinia pseudotuberculosis IP
31758]
gi|162419460|ref|YP_001605205.1| methionyl-tRNA formyltransferase [Yersinia pestis Angola]
gi|165927879|ref|ZP_02223711.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165936425|ref|ZP_02224993.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166010576|ref|ZP_02231474.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166213335|ref|ZP_02239370.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167398510|ref|ZP_02304034.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167418935|ref|ZP_02310688.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167425625|ref|ZP_02317378.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167468245|ref|ZP_02332949.1| methionyl-tRNA formyltransferase [Yersinia pestis FV-1]
gi|170022576|ref|YP_001719081.1| methionyl-tRNA formyltransferase [Yersinia pseudotuberculosis
YPIII]
gi|186897152|ref|YP_001874264.1| methionyl-tRNA formyltransferase [Yersinia pseudotuberculosis
PB1/+]
gi|218927447|ref|YP_002345322.1| methionyl-tRNA formyltransferase [Yersinia pestis CO92]
gi|229836277|ref|ZP_04456444.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis Pestoides A]
gi|229840099|ref|ZP_04460258.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229842181|ref|ZP_04462336.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229904519|ref|ZP_04519630.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis Nepal516]
gi|270488263|ref|ZP_06205337.1| methionyl-tRNA formyltransferase [Yersinia pestis KIM D27]
gi|294502315|ref|YP_003566377.1| methionyl-tRNA formyltransferase [Yersinia pestis Z176003]
gi|21542047|sp|Q8ZJ80|FMT_YERPE RecName: Full=Methionyl-tRNA formyltransferase
gi|73919429|sp|Q664V3|FMT_YERPS RecName: Full=Methionyl-tRNA formyltransferase
gi|123072597|sp|Q1C2X8|FMT_YERPA RecName: Full=Methionyl-tRNA formyltransferase
gi|123246111|sp|Q1CCX5|FMT_YERPN RecName: Full=Methionyl-tRNA formyltransferase
gi|166215599|sp|A4TH22|FMT_YERPP RecName: Full=Methionyl-tRNA formyltransferase
gi|166988372|sp|A7FNK3|FMT_YERP3 RecName: Full=Methionyl-tRNA formyltransferase
gi|238687337|sp|A9R926|FMT_YERPG RecName: Full=Methionyl-tRNA formyltransferase
gi|238688469|sp|B1JJH7|FMT_YERPY RecName: Full=Methionyl-tRNA formyltransferase
gi|238691392|sp|B2K505|FMT_YERPB RecName: Full=Methionyl-tRNA formyltransferase
gi|21961029|gb|AAM87566.1|AE014004_4 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis KIM 10]
gi|45434954|gb|AAS60515.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Microtus
str. 91001]
gi|51591238|emb|CAH22904.1| methionyl-tRNA formyltransferase [Yersinia pseudotuberculosis IP
32953]
gi|108777636|gb|ABG20155.1| methionyl-tRNA formyltransferase [Yersinia pestis Nepal516]
gi|108781136|gb|ABG15194.1| methionyl-tRNA formyltransferase [Yersinia pestis Antiqua]
gi|115346058|emb|CAL18924.1| methionyl-tRNA formyltransferase [Yersinia pestis CO92]
gi|145209178|gb|ABP38585.1| methionyl-tRNA formyltransferase [Yersinia pestis Pestoides F]
gi|149290119|gb|EDM40196.1| methionyl-tRNA formyltransferase [Yersinia pestis CA88-4125]
gi|152959811|gb|ABS47272.1| methionyl-tRNA formyltransferase [Yersinia pseudotuberculosis IP
31758]
gi|162352275|gb|ABX86223.1| methionyl-tRNA formyltransferase [Yersinia pestis Angola]
gi|165915541|gb|EDR34150.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165920155|gb|EDR37456.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165990666|gb|EDR42967.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166205633|gb|EDR50113.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166962929|gb|EDR58950.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167051014|gb|EDR62422.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167055315|gb|EDR65109.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169749110|gb|ACA66628.1| methionyl-tRNA formyltransferase [Yersinia pseudotuberculosis
YPIII]
gi|186700178|gb|ACC90807.1| methionyl-tRNA formyltransferase [Yersinia pseudotuberculosis
PB1/+]
gi|229678637|gb|EEO74742.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis Nepal516]
gi|229690491|gb|EEO82545.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229696465|gb|EEO86512.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229706345|gb|EEO92352.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Yersinia pestis Pestoides A]
gi|262360395|gb|ACY57116.1| methionyl-tRNA formyltransferase [Yersinia pestis D106004]
gi|262364345|gb|ACY60902.1| methionyl-tRNA formyltransferase [Yersinia pestis D182038]
gi|270336767|gb|EFA47544.1| methionyl-tRNA formyltransferase [Yersinia pestis KIM D27]
gi|294352774|gb|ADE63115.1| methionyl-tRNA formyltransferase [Yersinia pestis Z176003]
gi|320013374|gb|ADV96945.1| methionyl-tRNA formyltransferase [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 315
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 172/316 (54%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K S V A+ +P
Sbjct: 4 SLRIIFAGTPDFAARHLGALLSSQHKIVGVFTQPDRPAG-RGNKLTPSPVKILAEHHGIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE + ++ D+ VVVAYGL++P +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPKSLRPEENQHLVADLNADIMVVVAYGLILPAAVLAMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD +TGI IM+MD LDTG + + I +A L +L+ L ++
Sbjct: 123 PIQRSVWAGDEKTGITIMQMDIGLDTGAMLHKIECAIQPEDTSATLYDKLAQLGPQGLLI 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E TYAEK+SK E ++++ SA + IRA +P+P ++ +
Sbjct: 183 TLQQLAAGTALAEVQNETQATYAEKLSKEEAKLDWTLSATQLERCIRAFNPWPVSYFIV- 241
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ ++Q++ + +PG +I +A + G + I +LQ AG + +
Sbjct: 242 ---DEQPIKVWQAQVLPAGEDAEPGTIIHADKHGIQVATADGVLNITQLQPAGKKAMSAA 298
Query: 296 DFLLGCP--VIIGCIV 309
D L I G +
Sbjct: 299 DLLNSRREWFIPGSQL 314
>gi|313496439|gb|ADR57805.1| Fmt [Pseudomonas putida BIRD-1]
Length = 310
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 121/314 (38%), Positives = 173/314 (55%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L+AL+ S + IV+VYTQP RPAG RG K + SAV A +P
Sbjct: 1 MRIVFAGTPEFAAEHLKALLDSPYEIVAVYTQPDRPAG-RGQKLMPSAVKALAVAHDIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + D+ VVVAYGL++PQ +L+ LG N HASLLPRWRGAAP
Sbjct: 60 FQPQTLRNADAQAELAALKPDLMVVVAYGLILPQVVLDIPSLGCINSHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+ AGD E+G+ +M+M+ LDTGP+ PIS++ L L+ + A+V A
Sbjct: 120 IQRAVEAGDAESGVTVMRMEAGLDTGPMLLKVVTPISADDTGGTLHDRLAKMGPPAVVRA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L +L Q + TYA K++K E R+++ R A + IRA +P+P +
Sbjct: 180 IAGLADGSLQGEIQDDALATYAHKLNKDEARIDWTRPAVELERLIRAFNPWPVCHSTL-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
E +K+L + L G+G PGE++ +AC A+ + RLQ GG+ L D
Sbjct: 238 --DGESVKVLAANLSTGQGAPGEILSASKDGLVVACGDQALSLTRLQLPGGKALSFSDLF 295
Query: 299 LGCP--VIIGCIVG 310
G ++G
Sbjct: 296 NSRREKFAAGKVLG 309
>gi|323487021|ref|ZP_08092333.1| hypothetical protein HMPREF9474_04084 [Clostridium symbiosum
WAL-14163]
gi|323399669|gb|EGA92055.1| hypothetical protein HMPREF9474_04084 [Clostridium symbiosum
WAL-14163]
Length = 312
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 106/313 (33%), Positives = 170/313 (54%), Gaps = 6/313 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV TL+AL+ H + +V TQP +P G RG +++ V +KA E+ +P
Sbjct: 1 MKIVFMGTPDFAVPTLEALIRGGHQVAAVVTQPDKPKG-RGKAVLMTPVKEKAMEYGIPV 59
Query: 63 LVPTKLGQEEYEQFLSF--NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ Q++ + + D VV A+G ++PQRIL + G N HASLLPR+RG+A
Sbjct: 60 YQPARVKQDDEFFQVLKVLSPDAVVVTAFGQILPQRILELPRYGCINVHASLLPRYRGSA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ GD ETG+ M MD LDTG + V + + L LS+ ++
Sbjct: 120 PIQWAVINGDRETGVTTMMMDAGLDTGDMLEKIVVELDAKETGGSLFDRLSLAGGELILS 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++K E+ L + Q E G YA + K ++++ R AE + IR L+P+P A+
Sbjct: 180 TLEKAEKGTLVRTKQPEEGACYAGMLDKALGKIDWSRDAEAIERLIRGLNPWPSAYTAFE 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + +G+ + G ++ +F + +G +RI +LQ G + +D F
Sbjct: 240 GRTLKLWEAEVTDEFSDGQDEYGRIVKVEKDSFLVKTGKGCLRIRQLQLEGKKRMDTCAF 299
Query: 298 LLGCPVIIGCIVG 310
L G PV G I+G
Sbjct: 300 LRGYPVKEGIILG 312
>gi|167031104|ref|YP_001666335.1| methionyl-tRNA formyltransferase [Pseudomonas putida GB-1]
gi|189044567|sp|B0KF29|FMT_PSEPG RecName: Full=Methionyl-tRNA formyltransferase
gi|166857592|gb|ABY95999.1| methionyl-tRNA formyltransferase [Pseudomonas putida GB-1]
Length = 310
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 121/314 (38%), Positives = 175/314 (55%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L+AL+ S + IV+VYTQP RPAG RG K + SAV A +P
Sbjct: 1 MRIVFAGTPEFAAEHLKALLDSPYEIVAVYTQPDRPAG-RGQKLMPSAVKALAVAHDIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAAP
Sbjct: 60 FQPQTLRNADAQAELAALKPDLMVVVAYGLILPQAVLDIPRLGCINSHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+ AGD E+G+ +M+M+ LDTGP+ PIS++ L L+ + A+V+A
Sbjct: 120 IQRAVEAGDAESGVTVMRMEAGLDTGPMLLKVVTPISADDTGGTLHDRLAEMGPPAVVQA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L +L Q + TYA K++K E R+++ R A + IRA +P+P +
Sbjct: 180 IAGLADGSLQGEVQDDALATYAHKLNKDEARIDWSRPAVELERLIRAFNPWPVCHSTL-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
E +K+L + L G+G PGE++ +AC A+ + RLQ GG+ L D
Sbjct: 238 --DGESVKVLAANLSTGKGAPGEILSASKDGLVVACGDQALSLTRLQLPGGKALSFSDLF 295
Query: 299 LGCP--VIIGCIVG 310
G ++G
Sbjct: 296 NSRREKFAAGKVLG 309
>gi|308188324|ref|YP_003932455.1| Methionyl-tRNA formyltransferase [Pantoea vagans C9-1]
gi|308058834|gb|ADO11006.1| Methionyl-tRNA formyltransferase [Pantoea vagans C9-1]
Length = 314
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 113/315 (35%), Positives = 176/315 (55%), Gaps = 12/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+++F GT +FA L AL++S H ++ V+TQP RPAG RG K V A +P
Sbjct: 4 PLKIIFAGTPDFAARHLDALLASEHQVIGVFTQPDRPAG-RGNKLTPGPVKTLALAHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE +Q ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VYQPKSLRPEENQQLVADLKADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD+ETG+ IM+MD LDTG + PI++ +A L +L+ L +++
Sbjct: 123 PIQRALWAGDSETGVTIMQMDVGLDTGDMLHKLACPITAEDTSATLYDKLAQLGPQGLLD 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L Q E YAEK+SK E R+++ SA+ + IRA +P+P ++ +
Sbjct: 183 TLTLLSTGQASPEKQDETLANYAEKLSKEEARLDWTLSADQLERCIRAFNPWPMSFFTID 242
Query: 241 IGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ ++ ++ + PGE+I +A +QG + +++LQ AG + + D
Sbjct: 243 D----QPVKVWQASVLPHSDRSPGEIISADKHGIQVATAQGVLNLLQLQPAGKKPMSAQD 298
Query: 297 FLLGCP--VIIGCIV 309
L G ++
Sbjct: 299 LLNSRREWFEPGTLL 313
>gi|107099011|ref|ZP_01362929.1| hypothetical protein PaerPA_01000018 [Pseudomonas aeruginosa PACS2]
gi|218888764|ref|YP_002437628.1| methionyl-tRNA formyltransferase [Pseudomonas aeruginosa LESB58]
gi|226704303|sp|B7V0Q3|FMT_PSEA8 RecName: Full=Methionyl-tRNA formyltransferase
gi|218768987|emb|CAW24745.1| methionyl-tRNA formyltransferase [Pseudomonas aeruginosa LESB58]
Length = 314
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 127/318 (39%), Positives = 179/318 (56%), Gaps = 13/318 (4%)
Query: 1 MT--LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M+ LR+VF GT EFA L+AL+ + H IV+VYTQP RPAG RG K + SAV A E
Sbjct: 1 MSQALRIVFAGTPEFAAEHLKALLDTPHRIVAVYTQPDRPAG-RGQKLMPSAVKNLALEH 59
Query: 59 SLPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP + P E + + AD+ VVVAYGL++PQ +L+ +LG N HASLLPRWR
Sbjct: 60 GLPVMQPQSLRNAEAQAELAALRADLMVVVAYGLILPQAVLDIPRLGCINSHASLLPRWR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPIQRA+ AGD E+G+ +M+M+ LDTGP+ PIS+ L L+ L A
Sbjct: 120 GAAPIQRAVEAGDAESGVTVMQMEAGLDTGPMLLKVSTPISAADTGGSLHDRLAALGPKA 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
++EA+ L L Q + TYA K++K E R+++ R A + +RA +P+P
Sbjct: 180 VIEAIAGLAAGTLHGEIQDDALATYAHKLNKDEARLDWSRPAVELERQVRAFTPWPVCHT 239
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +K+L + L +G G PG ++ +AC +GA+R+ RLQ GG+ L
Sbjct: 240 SLADAP----LKVLGASLGQGSGAPGTILEASRDGLLVACGEGALRLTRLQLPGGKPLAF 295
Query: 295 GDFLLGCP--VIIGCIVG 310
D G ++G
Sbjct: 296 ADLYNSRREQFAAGQVLG 313
>gi|209965581|ref|YP_002298496.1| methionyl-tRNA formyltransferase fmt [Rhodospirillum centenum SW]
gi|254789365|sp|B6IPI1|FMT_RHOCS RecName: Full=Methionyl-tRNA formyltransferase
gi|209959047|gb|ACI99683.1| methionyl-tRNA formyltransferase fmt [Rhodospirillum centenum SW]
Length = 309
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 134/306 (43%), Positives = 184/306 (60%), Gaps = 5/306 (1%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
+ FMGT +F+V L AL + H +V VYTQPPRPAG RG + S VH++A+ +P
Sbjct: 6 LAFMGTPDFSVPILDALAGAGHRVVCVYTQPPRPAG-RGHQLQPSPVHRRAEALGIPVRH 64
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P G E +F + D AVV AYGL++PQ +L+A +LG N HASLLPRWRGAAPIQ
Sbjct: 65 PKSLRGAEAQAEFAALGLDCAVVAAYGLILPQPVLDAPRLGCINVHASLLPRWRGAAPIQ 124
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
RAI AGD +G+ IM+M+ LDTGP+ +VPI L LS A +V A+D
Sbjct: 125 RAIQAGDAVSGVTIMRMEAGLDTGPMLLKGEVPIGPRTGAQALHDALSEQGARLIVAALD 184
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
L L PQ E G+TYA K++K E R++F A + +RA +P+PG W E + G
Sbjct: 185 GLAAGRLTAEPQPEEGVTYAAKLAKEEGRLDFALDAATLDRQVRAFTPWPGCWFEAVTG- 243
Query: 244 KHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPV 303
ER+K+L ++ V G G+PG ++ T+AC +GA+R++ +QR G +D FL G P
Sbjct: 244 --ERLKVLAAEPVSGRGEPGTLLPGGLTVACGEGALRLLTVQRPGKAPVDGAAFLRGFPH 301
Query: 304 IIGCIV 309
G +
Sbjct: 302 APGARI 307
>gi|225377870|ref|ZP_03755091.1| hypothetical protein ROSEINA2194_03529 [Roseburia inulinivorans DSM
16841]
gi|225210308|gb|EEG92662.1| hypothetical protein ROSEINA2194_03529 [Roseburia inulinivorans DSM
16841]
Length = 311
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 96/309 (31%), Positives = 163/309 (52%), Gaps = 3/309 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT +FAV TL+ ++ + H +V V +QP + G R + V + A +
Sbjct: 1 MRVIFMGTPDFAVGTLEEIIKAGHEVVLVVSQPDKAVG-RSKALKYTPVKECAVAHGIEV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ EE ++ +NAD+ +V A+G +IP+ IL+ + G N HASLLP++RGAAP
Sbjct: 60 YQPAKIRAEESVEYLRQYNADIIIVEAFGQIIPKAILDMPRFGCVNVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ GD TG+ M+MD+ LDTG + ++V + + L +LS + A V+
Sbjct: 120 IQWAVLNGDQVTGVTTMRMDEGLDTGDMIMKQEVIVDEDETGGSLFDKLSEVGAKLCVKT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
M+ +E +PQ + T+ KI K +++ + AE + +R L+P+P A+ +
Sbjct: 180 MEAIENGTAVYTPQDDALATHTGKIQKEMGSIDWSKDAEVIERLVRGLNPWPSAYTRIDD 239
Query: 242 GN-KHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
N K R K++ ++ G +V + G + ++ +Q G + + FL G
Sbjct: 240 KNLKIWRAKVISHEVKAAPGCILKVTKDELEVQTGNGVLALLEVQLEGKKRMTTDAFLRG 299
Query: 301 CPVIIGCIV 309
V G +
Sbjct: 300 YQVTEGSFL 308
>gi|145629885|ref|ZP_01785677.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 22.1-21]
gi|145639369|ref|ZP_01794974.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittII]
gi|144977739|gb|EDJ87686.1| methionyl-tRNA formyltransferase [Haemophilus influenzae 22.1-21]
gi|145271416|gb|EDK11328.1| methionyl-tRNA formyltransferase [Haemophilus influenzae PittII]
Length = 318
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 116/318 (36%), Positives = 183/318 (57%), Gaps = 10/318 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQA+++S H++++VYTQP +PAG RG K S V + A++ +
Sbjct: 1 MKSLNIIFSGTPDFAAQHLQAILNSQHNVIAVYTQPDKPAG-RGKKLQASPVKQLAEQNN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P L +EE + L DV VVVAYGL++P+ +L+A +LG N H S+LPRWRG
Sbjct: 60 IPVYQPKSLRKEEAQSELKALNADVMVVVAYGLILPKAVLDAPRLGCLNVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQR+I AGD +TG+ IM+MD+ LDTG + I + L +L+ L A+
Sbjct: 120 AAPIQRSIWAGDVQTGVTIMQMDEGLDTGDMLHKVYCDILPTETSTSLYNKLAELAPSAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ +D LE Q + YAEK+SK E ++N+ SA + +IRA +P+P A+
Sbjct: 180 IDVLDNLENGKFIAEKQDGSQSNYAEKLSKEEAQLNWSLSAMQLERNIRAFNPWPIAYFS 239
Query: 239 MMIGN-KHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ +K+ +++++ + KP G ++ IA G + +++LQ AG + +
Sbjct: 240 TEDKDGNAHTLKVYQAKVLPHQDKPAGTILSADKNGIQIATVDGVLNLLQLQSAGKKPMS 299
Query: 294 IGDFLLGCP--VIIGCIV 309
D L G IG ++
Sbjct: 300 AQDLLNGRAEWFTIGKVL 317
>gi|311068094|ref|YP_003973017.1| methionyl-tRNA formyltransferase [Bacillus atrophaeus 1942]
gi|310868611|gb|ADP32086.1| methionyl-tRNA formyltransferase [Bacillus atrophaeus 1942]
Length = 317
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 100/317 (31%), Positives = 167/317 (52%), Gaps = 13/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT R+VFMGT +F+V L+ L+ + +V V TQP RP G R V ++A +
Sbjct: 1 MT-RIVFMGTPDFSVPVLRTLIDEGYEVVGVVTQPDRPKG-RKKVMTPPPVKEEALRHGI 58
Query: 61 PALVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ Q+E + + + D+ V A+G ++P+++L++ K G N HASLLP RG
Sbjct: 59 TVLQPEKVRQDEEIEKVLALKPDLIVTAAFGQILPKKLLDSPKYGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +I+ G +TG+ IM M + LD G + +V I N N L +LS A +
Sbjct: 119 APIHYSILQGKKKTGVTIMYMVEKLDAGDMLSKIEVDIEENDNVGTLHDKLSKAGAKLLS 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + + N+ Q E TYA I + + +++ RS E+++N +R L+P+P A+ +
Sbjct: 179 QTVPDVIKGNVTPIQQDEGKATYAPNIKREQELIDWSRSGEDLYNQVRGLNPWPVAYTTL 238
Query: 240 MIGNKHERIKLLESQ--LVEGEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLD 293
N +K+ ++ + + +PG VI +A + A+ + LQ AG + +
Sbjct: 239 NGQN----LKIWSAKKTPAQKKAEPGTVIAVEENGIVVATGNETALLVTELQPAGKKRMK 294
Query: 294 IGDFLLGCPVIIGCIVG 310
DF+ G V G ++G
Sbjct: 295 GEDFVRGANVQTGEVLG 311
>gi|229104428|ref|ZP_04235097.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock3-28]
gi|228679126|gb|EEL33334.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock3-28]
Length = 314
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 107/313 (34%), Positives = 166/313 (53%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + +V V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYEQ L+ AD+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLKIREKDEYEQVLALEADLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E+ +++A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEDEVSFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E +E + +PG ++ F +A V+I LQ +G + + F
Sbjct: 240 -EQVVKVWWGEKVSLEAKAEPGTIVGLEEDGFVVATGNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|49473751|ref|YP_031793.1| methionyl-tRNA formyltransferase [Bartonella quintana str.
Toulouse]
gi|73919379|sp|Q6G1G8|FMT_BARQU RecName: Full=Methionyl-tRNA formyltransferase
gi|49239254|emb|CAF25575.1| Methionyl-tRNA formyltransferase [Bartonella quintana str.
Toulouse]
Length = 309
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 152/306 (49%), Positives = 196/306 (64%), Gaps = 2/306 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR+ FMGT F+V L AL+ + H IV+VY+QPPRPAGRRGLK + S V AQ S+
Sbjct: 1 MGLRLSFMGTPHFSVPILHALLDAGHDIVAVYSQPPRPAGRRGLKMIPSPVQNAAQAKSI 60
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P E+ QF DVA+VVAYGL +P+ IL +LG +N HASLLPRWRGA
Sbjct: 61 PVFTPQTLKTAEKQAQFAELAVDVAIVVAYGLFLPKAILETPRLGCFNAHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD ETG+ IMKMD+ LDTG +A R +PI+ N L +LS + A M+
Sbjct: 121 APIQRAIMAGDKETGMMIMKMDEGLDTGSIALSRSIPITDNTTADELSNKLSHIGAELMI 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + LE+ L L+PQ ITYA KI K ETR+++ + AE +H IRALSPFPG W M
Sbjct: 181 EMLSTLEKGQLKLTPQSGENITYASKIKKEETRIDWTKPAEFIHRQIRALSPFPGCWCNM 240
Query: 240 MIGNKHERIKLLESQLVEGEG-KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
I + ER+K+L S+L +G + G + + I C QG + I LQ++GG++LD FL
Sbjct: 241 NIAGREERVKILGSRLTKGPSREIGWIEPNSLIIHCGQGRIEITSLQKSGGKILDSAAFL 300
Query: 299 LGCPVI 304
G +
Sbjct: 301 RGARLS 306
>gi|104779337|ref|YP_605835.1| methionyl-tRNA formyltransferase [Pseudomonas entomophila L48]
gi|123381103|sp|Q1IH35|FMT_PSEE4 RecName: Full=Methionyl-tRNA formyltransferase
gi|95108324|emb|CAK13018.1| methionyl-tRNA formyltransferase [Pseudomonas entomophila L48]
Length = 310
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 123/314 (39%), Positives = 175/314 (55%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L+AL+ S + IV+VYTQP RPAG RG K + SAV A +P
Sbjct: 1 MRIVFAGTPEFAAEHLKALLDSPYEIVAVYTQPDRPAG-RGQKLMPSAVKALAVAHDIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAAP
Sbjct: 60 YQPQTLRNPEAQAELAALKPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+ AGD E+G+ +M+M+ LDTGP+ PIS+ L L+ + A+V+A
Sbjct: 120 IQRAVEAGDAESGVTVMRMEAGLDTGPMLLKVVTPISAEDTGGTLHDRLAAMGPGAVVQA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L +L Q + TYA K++K E R+++ R A + IRA +P+P +
Sbjct: 180 IAGLADGSLQGEVQDDTLATYAHKLNKDEARIDWNRPAVELERLIRAFNPWPVCHSTL-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
E +K+L + L G+G PGE++ +AC GA+ + RLQ GG+ L D
Sbjct: 238 --DGESVKVLAANLSTGKGTPGEILSASKDGLVVACGDGALSLTRLQLPGGKALAFSDLF 295
Query: 299 LGCP--VIIGCIVG 310
G ++G
Sbjct: 296 NSRREKFAGGKVLG 309
>gi|304399257|ref|ZP_07381123.1| methionyl-tRNA formyltransferase [Pantoea sp. aB]
gi|304353183|gb|EFM17564.1| methionyl-tRNA formyltransferase [Pantoea sp. aB]
Length = 314
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 114/315 (36%), Positives = 176/315 (55%), Gaps = 12/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+++F GT +FA L AL++S H ++ V+TQP RPAG RG K V A +P
Sbjct: 4 PLKIIFAGTPDFAARHLDALLASEHQVIGVFTQPDRPAG-RGNKLTPGPVKTLAMAHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE +Q ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VYQPKSLRPEENQQLVADLKADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD+ETG+ IM+MD LDTG + PI++ +A L +L+ L +++
Sbjct: 123 PIQRALWAGDSETGVTIMQMDVGLDTGDMLHKLACPITAQDTSATLYDKLAELGPQGLLD 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L Q E YAEK+SK E R+++ SAE + IRA +P+P ++ +
Sbjct: 183 TLTLLSTQQATPEKQDEAQANYAEKLSKEEARLDWTLSAEQLERCIRAFNPWPMSFFTID 242
Query: 241 IGNKHERIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ ++ ++ + PGE+I +A +QG + +++LQ AG + + D
Sbjct: 243 D----QPVKVWQASVLPHSDRSPGEIIHADKRGIQVATAQGVLNLLQLQPAGKKPMSAQD 298
Query: 297 FLLGCP--VIIGCIV 309
L G ++
Sbjct: 299 LLNSRREWFEPGTLL 313
>gi|77456244|ref|YP_345749.1| methionyl-tRNA formyltransferase [Pseudomonas fluorescens Pf0-1]
gi|123606497|sp|Q3KKE6|FMT_PSEPF RecName: Full=Methionyl-tRNA formyltransferase
gi|77380247|gb|ABA71760.1| methionyl-tRNA formyltransferase [Pseudomonas fluorescens Pf0-1]
Length = 319
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 121/315 (38%), Positives = 177/315 (56%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S + IV+VYTQP RPAG RG K + S V + A E ++
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSPYEIVAVYTQPDRPAG-RGQKLMPSPVKQLALENNIQ 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VLQPPTLRNADAQAELAALKPDLMVVVAYGLILPQAVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PIS+ L L+ + A+V+
Sbjct: 123 PIQRAVEAGDAESGVTVMRMEAGLDTGPMLLKVVTPISAEDTGGSLHDRLAEMGPPAVVQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L L Q + TYA K++K E R+++ R A + +RA +P+P +
Sbjct: 183 AIAGLAAGTLEGEVQNDELATYAHKLNKDEARIDWSRPAVELERLVRAFNPWPITHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PG ++ +AC + A+ + RLQ GG+ L+ D
Sbjct: 242 ---NGEALKVLAATLAEGKGAPGTILGASKDGLIVACGEQALCLTRLQLPGGKALNFSDL 298
Query: 298 LLGCP--VIIGCIVG 310
G ++G
Sbjct: 299 FNSRREKFATGIVLG 313
>gi|229098335|ref|ZP_04229282.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock3-29]
gi|229117352|ref|ZP_04246730.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock1-3]
gi|228666252|gb|EEL21716.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock1-3]
gi|228685233|gb|EEL39164.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock3-29]
Length = 314
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 107/313 (34%), Positives = 166/313 (53%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + +V V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ AD+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLKIREKDEYEKVLALEADLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E+ +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEDEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E +E + +PG ++ F +A V+I LQ +G + + F
Sbjct: 240 -EQVVKVWWGEKVSLEAKAEPGTIVGLEEDGFVVATGNEIGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|170760650|ref|YP_001787824.1| methionyl-tRNA formyltransferase [Clostridium botulinum A3 str.
Loch Maree]
gi|169407639|gb|ACA56050.1| methionyl-tRNA formyltransferase [Clostridium botulinum A3 str.
Loch Maree]
Length = 313
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 90/318 (28%), Positives = 167/318 (52%), Gaps = 16/318 (5%)
Query: 3 LR---VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
++ +VFMGT +FAV +L+ L+ ++ +V+TQP RP G RG K +SAV + A E +
Sbjct: 1 MKDTTIVFMGTPDFAVPSLKKLIE-EFNVKAVFTQPDRPKG-RGKKLAMSAVKEVALENN 58
Query: 60 LPALVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+ P + + ++ N D +VVA+G ++ + +L+ K G N HASLLP++R
Sbjct: 59 IEVYQPIRLKNDEICIKKLKEINPDFIIVVAFGQILSKEVLDIPKYGCINLHASLLPKYR 118
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI AI+ G+ E+G M MD+ LDTG + V I ++ L L +
Sbjct: 119 GAAPINWAIIKGETESGNTTMFMDEGLDTGDMLLKNTVKIEDDMTFGELHDILMETGSKL 178
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+V+ + L++ + Q I YA ++K ++++ ++++ ++ IR L+P P A+
Sbjct: 179 LVDTIKGLKEGTIKREKQKSENIIYASMLNKQMGKIDWNKTSKEINLLIRGLNPRPVAYT 238
Query: 238 EMMIGNKHERIKLLESQLVE--GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVL 292
+ +E +K+ S +++ PG ++ +A G + I +Q G + +
Sbjct: 239 QYK----NEAMKIYNSSILKESSNKTPGTILKVSKEGIKVATGDGILSITTVQFPGKKPM 294
Query: 293 DIGDFLLGCPVIIGCIVG 310
+ +++ G + G ++G
Sbjct: 295 KVEEYIKGHTIEEGLVLG 312
>gi|118589716|ref|ZP_01547121.1| methionyl-tRNA formyltransferase [Stappia aggregata IAM 12614]
gi|118437802|gb|EAV44438.1| methionyl-tRNA formyltransferase [Stappia aggregata IAM 12614]
Length = 312
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 149/312 (47%), Positives = 199/312 (63%), Gaps = 4/312 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+LRV+FMGT +F+V TL +V H +V+ Y+QPPRPAG RG+ S VH+ A+ F +
Sbjct: 1 MSLRVIFMGTPDFSVPTLMEIVGQGHDVVACYSQPPRPAG-RGMDLKKSPVHEAAESFGI 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P G EE E F + +ADVAVVVAYGL++P+ IL+A K G N HAS+LPRWRGA
Sbjct: 60 PVFTPQSLKGAEEQEAFSALDADVAVVVAYGLLLPKPILDAPKYGCLNLHASMLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API RAIMAGD ET + +M+M++ LDTGPV V I N+ L +LS L MV
Sbjct: 120 APINRAIMAGDTETAVQVMRMEEGLDTGPVCMSETVAIGENMTAGDLHDKLSSLGGDLMV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
A+ L + L Q G++YA K+SK ETR+++ + A VHNHIR LSPFPGAW EM
Sbjct: 180 RALAALSRGALGDQAQAAEGVSYAAKLSKQETRIDWSKPAAEVHNHIRGLSPFPGAWCEM 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEV-INPNF-TIACSQGAVRIMRLQRAGGRVLDIGDF 297
+G K ER+K+L S L E G PG + + + C GAVR+ ++QRAG + + +F
Sbjct: 240 PLGGKAERVKVLRSTLGEASGTPGSIQTGADVPVVCCGTGAVRLEQVQRAGKKPMSGAEF 299
Query: 298 LLGCPVIIGCIV 309
L G + G ++
Sbjct: 300 LRGASLSDGTVL 311
>gi|148545340|ref|YP_001265442.1| methionyl-tRNA formyltransferase [Pseudomonas putida F1]
gi|166215501|sp|A5VWJ8|FMT_PSEP1 RecName: Full=Methionyl-tRNA formyltransferase
gi|148509398|gb|ABQ76258.1| methionyl-tRNA formyltransferase [Pseudomonas putida F1]
Length = 310
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 121/314 (38%), Positives = 174/314 (55%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L+AL+ S + IV+VYTQP RPAG RG K + SAV A +P
Sbjct: 1 MRIVFAGTPEFAAEHLKALLDSPYEIVAVYTQPDRPAG-RGQKLMPSAVKALAVAHDIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAAP
Sbjct: 60 FQPQTLRNADAQAELAALKPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+ AGD E+G+ +M+M+ LDTGP+ PIS+ L L+ + A+V+A
Sbjct: 120 IQRAVEAGDAESGVTVMRMEAGLDTGPMLLKVVTPISAEDTGGTLHDRLAEMGPPAVVQA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L +L Q + TYA K++K E R+++ R A + IRA +P+P +
Sbjct: 180 IAGLADGSLQGEIQDDALATYAHKLNKDEARIDWTRPAVELERLIRAFNPWPVCHSML-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
E +K+L + L G+G PGE++ +AC A+ + RLQ GG+ L D
Sbjct: 238 --DGESVKVLAANLSTGQGAPGEILSASKDGLVVACGDQALSLTRLQLPGGKALSFSDLF 295
Query: 299 LGCP--VIIGCIVG 310
G ++G
Sbjct: 296 NSRREKFAAGKVLG 309
>gi|171778150|ref|ZP_02919407.1| hypothetical protein STRINF_00243 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171283132|gb|EDT48556.1| hypothetical protein STRINF_00243 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 311
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 162/316 (51%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +FA L+ L+ +++ +++V TQP R G R + ++ V + A +
Sbjct: 1 MT-KLIFMGTPDFAATVLEGLLDDANYDVLAVVTQPDRAVG-RKKEIKMTPVKEVALAHN 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P K+ + L +V A L + N HASLLP++RG
Sbjct: 59 LPVYQPEKMSGSDEMAKLMTLGADGIVTAAFGQFLPTKLLDSVDFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ GD E G+ IM+M K +D G + PI+ N + ++L+V+ ++
Sbjct: 119 APIHYAIINGDKEAGVTIMEMVKKMDAGDMIAKASTPITDEDNVGTMFEKLAVIGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + N+ Q E+ T++ I+ E R+++ +SA V NHIR L P+P A +
Sbjct: 179 KTLPDYIAGNIKPELQDESKATFSPNITSEEERIDWNKSAREVFNHIRGLYPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E+ L EG+G+PG++I +A GA+ + +Q AG + I D
Sbjct: 239 ----DGKRFKIYEASLAEGQGQPGQIIEKGKKTLVVATGDGAISLKTVQPAGKPRMSIVD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G ++G
Sbjct: 295 FLNGVGRKLEVGDLIG 310
>gi|269140541|ref|YP_003297242.1| methionyl-tRNA formyltransferase [Edwardsiella tarda EIB202]
gi|267986202|gb|ACY86031.1| methionyl-tRNA formyltransferase [Edwardsiella tarda EIB202]
gi|304560326|gb|ADM42990.1| Methionyl-tRNA formyltransferase [Edwardsiella tarda FL6-60]
Length = 315
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L+AL++S H IV V+TQP RP+G RG K S V A + LP
Sbjct: 4 SLRIIFAGTPDFAARHLEALLASDHQIVGVFTQPDRPSG-RGNKLTPSPVKALALQHDLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE ++ ++ DV VVVAYGL++PQ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPASLRPEENQRLVASLQADVMVVVAYGLILPQAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD+ETG+ IM+MD LDTG + P++ + +A L +L+ L ++
Sbjct: 123 PIQRALWAGDSETGVTIMQMDVGLDTGDMLLKLSCPVTQDDTSATLYDKLAALGPQGLLT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + Q + TYAEK+SK E R+++ SAE + +RA +P+P ++ +
Sbjct: 183 TLSQLADDTAQAQKQDDALSTYAEKLSKEEARLDWSLSAEQLARCVRAFNPWPVSFFMLE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ E+ + PG ++ +A +QG + + +LQ AG + +
Sbjct: 243 EQS----VKVWEATALSQHATAAPGTIVSADKQGIAVATAQGVLLLTQLQPAGKKSMTAR 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G ++
Sbjct: 299 DLLNSRKESFLPGTVL 314
>gi|304404143|ref|ZP_07385805.1| methionyl-tRNA formyltransferase [Paenibacillus curdlanolyticus
YK9]
gi|304347121|gb|EFM12953.1| methionyl-tRNA formyltransferase [Paenibacillus curdlanolyticus
YK9]
Length = 318
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 169/319 (52%), Gaps = 16/319 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT FAV +L+ +++S H +V+V TQP RP G R + V + A +P
Sbjct: 1 MKIVFMGTPSFAVPSLERVLASGHEVVAVITQPDRPKG-RKRELAPPPVKEAALAHGIPV 59
Query: 63 LVPTKLGQEEYEQ-FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ EE S ++ + AYG ++P+ +L+ LG N H SLLP++RG AP
Sbjct: 60 YQPERMRSEEAIALVASLAPELIITAAYGQILPKAVLDVPPLGCINVHGSLLPKYRGGAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQR+I+ G++ TG+ IM M + LDTG + +VPI + L ++LS A +++
Sbjct: 120 IQRSIINGESVTGVTIMYMAEGLDTGDMISRIEVPIDEADTSGTLFEKLSAAGADLLMQT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E + PQ +YA +++ + R+++ RSA +++ +R LSP GA+ +
Sbjct: 180 LPSIEAGTVQAVPQQHEDASYAPNLTRDDERIDWTRSARQLYDQVRGLSPMAGAFTQ--- 236
Query: 242 GNKHERIKLLESQLVEGEG-------KPGEVIN---PNFTIACSQGAVRIMRLQRAGGRV 291
E K+ Q V +G PG V++ T+ +GA+ ++ +Q +G R
Sbjct: 237 -WNGEPFKIWRCQPVAAKGSGAPAAATPGTVLSASAEGITVQTGEGALLLLDIQPSGKRA 295
Query: 292 LDIGDFLLGCPVIIGCIVG 310
+ D+L G + G G
Sbjct: 296 MPASDWLKGARLEPGAQFG 314
>gi|15595216|ref|NP_248708.1| methionyl-tRNA formyltransferase [Pseudomonas aeruginosa PAO1]
gi|6016037|sp|O85732|FMT_PSEAE RecName: Full=Methionyl-tRNA formyltransferase
gi|9945837|gb|AAG03408.1|AE004441_9 methionyl-tRNA formyltransferase [Pseudomonas aeruginosa PAO1]
gi|3328155|gb|AAC26787.1| methionyl-tRNA formyltransferase [Pseudomonas aeruginosa]
Length = 314
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 127/318 (39%), Positives = 179/318 (56%), Gaps = 13/318 (4%)
Query: 1 MT--LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M+ LR+VF GT EFA L+AL+ + H IV+VYTQP RPAG RG K + SAV A E
Sbjct: 1 MSQALRIVFAGTPEFAAEHLKALLDTPHRIVAVYTQPDRPAG-RGQKLMPSAVKSLALEH 59
Query: 59 SLPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP + P E + + AD+ VVVAYGL++PQ +L+ +LG N HASLLPRWR
Sbjct: 60 GLPVMQPQSLRNAEAQAELAALRADLMVVVAYGLILPQAVLDIPRLGCINSHASLLPRWR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPIQRA+ AGD E+G+ +M+M+ LDTGP+ PIS+ L L+ L A
Sbjct: 120 GAAPIQRAVEAGDAESGVTVMQMEAGLDTGPMLLKVSTPISAADTGGSLHDRLAALGPKA 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
++EA+ L L Q + TYA K++K E R+++ R A + +RA +P+P
Sbjct: 180 VIEAIAGLAAGTLHGEIQDDALATYAHKLNKDEARLDWSRPAVELERQVRAFTPWPVCHT 239
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +K+L + L +G G PG ++ +AC +GA+R+ RLQ GG+ L
Sbjct: 240 SLADAP----LKVLGASLGQGSGAPGTILEASRDGLLVACGEGALRLTRLQLPGGKPLAF 295
Query: 295 GDFLLGCP--VIIGCIVG 310
D G ++G
Sbjct: 296 ADLYNSRREQFAAGQVLG 313
>gi|134299561|ref|YP_001113057.1| methionyl-tRNA formyltransferase [Desulfotomaculum reducens MI-1]
gi|172044290|sp|A4J579|FMT_DESRM RecName: Full=Methionyl-tRNA formyltransferase
gi|134052261|gb|ABO50232.1| methionyl-tRNA formyltransferase [Desulfotomaculum reducens MI-1]
Length = 317
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 102/315 (32%), Positives = 169/315 (53%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FA +L+AL+ + +V+V TQP +P G RG + V A E+ +P
Sbjct: 1 MRIVFMGTPDFAATSLKALIDAGQQVVAVVTQPDKPKG-RGRQVQPPPVKVLANEYKIPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L PT + E++Q + + VVVAYG ++P IL G N HASLLP +RG+AP
Sbjct: 60 LQPTSIKINEFQQTIEELKPECIVVVAYGKILPTEILELPPKGCINVHASLLPYYRGSAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ ETG+ M MDK +DTG + V I + + +L+ A ++E
Sbjct: 120 IHWAIINGEEETGVTTMFMDKGMDTGDMILKSSVSIGPSDTVGAIHDKLASDGAKLLIET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE++ P PQ TYA + K +++ SA+++HNH+R ++P+PG +
Sbjct: 180 IHLLEEDCAPRIPQNHKLATYAPMLRKEHELIHWDLSAKDIHNHVRGMNPWPGTYT---- 235
Query: 242 GNKHERIKLLESQLVEG---EGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++ +K+ ++ + + PG V+ + + G + I LQ G R +++
Sbjct: 236 IWDNKILKIWQTTIPAHQNIDADPGTVLEVSPSGILVQTAGGQILIKELQLQGSRRMEVT 295
Query: 296 DFLLGCPVIIGCIVG 310
+FL G + G ++G
Sbjct: 296 EFLRGKQMSPGTVLG 310
>gi|242237891|ref|YP_002986072.1| methionyl-tRNA formyltransferase [Dickeya dadantii Ech703]
gi|242129948|gb|ACS84250.1| methionyl-tRNA formyltransferase [Dickeya dadantii Ech703]
Length = 313
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 114/315 (36%), Positives = 173/315 (54%), Gaps = 9/315 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR++F GT +FA L AL++S H IV V+TQP RPAG RG K S V A+ +
Sbjct: 1 MALRIIFAGTPDFAARHLDALLTSRHEIVGVFTQPDRPAG-RGNKLTPSPVKVLAECKGI 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P +E + + ADV VVVAYGL++PQ +L+ +LG N H SLLP+WRGA
Sbjct: 60 PVFQPKSLRPEENQQLIAALQADVMVVVAYGLILPQTVLDIPRLGCINVHGSLLPKWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQR++ AGD ETGI IM+MD LDTG + + + PI + +A L +L+ L ++
Sbjct: 120 APIQRSLWAGDAETGITIMQMDAGLDTGDMLYKMECPILPDDTSATLYDKLAELGPQGLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+++L PQ TYAEK+SK E R+++ SA + IRA +P+P ++ +
Sbjct: 180 ITLEQLASAQTKPEPQNNALATYAEKLSKEEARLDWQLSAAQLERCIRAFNPWPMSYFTV 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
++ ++ E+ ++ PG +I +A + G + + LQ +G + + D
Sbjct: 240 --DDQPLKVWKAEALDIKHNKHPGTIIDANKHGIQVATTDGVLNMQMLQPSGKKAMPAQD 297
Query: 297 FLLGCP--VIIGCIV 309
L G ++
Sbjct: 298 LLNSRREWFESGKVL 312
>gi|302386505|ref|YP_003822327.1| methionyl-tRNA formyltransferase [Clostridium saccharolyticum WM1]
gi|302197133|gb|ADL04704.1| methionyl-tRNA formyltransferase [Clostridium saccharolyticum WM1]
Length = 315
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 172/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT +F+V L AL + H I+ V TQP +P G RG + ++ V +KA E++L
Sbjct: 1 MRIIFMGTPDFSVPALVALKEAGHEILGVVTQPDKPKG-RGKEVQMTPVKEKALEYNLQV 59
Query: 63 LVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K E+ + LS D+ VV+A+G ++P+ IL+ G N HASLLP++RGA+P
Sbjct: 60 YQPVKARDPEFVKILSDMAPDLIVVIAFGQLLPKTILDIPPYGCVNIHASLLPKYRGASP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ E+G+ IM M + LDTG + + + L +LS + + +++
Sbjct: 120 IQYAVINGEKESGVTIMMMAESLDTGDMLDQEAIALEEKETFGSLHDKLSGIGSRLILKT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+DKLE+ +PQ ++ Y I K +++ A ++ IR L+P+P A+
Sbjct: 180 IDKLEEGTAVRTPQDDSRTCYVGMIKKSMGDIDWSMDAVSIERLIRGLNPWPSAYTT--- 236
Query: 242 GNKHERIKLLESQLVEGE-----GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +KL E+++++ E G+ EV + I +G + I +LQ G + +D+
Sbjct: 237 -WNGKVMKLWEAEVIDKEYEGACGQVAEVNRDSLVIKTGKGGLSIRKLQLQGKKCMDVDA 295
Query: 297 FLLGCPVIIGCIV 309
FL G + G ++
Sbjct: 296 FLRGYSIAKGTVL 308
>gi|254243130|ref|ZP_04936452.1| methionyl-tRNA formyltransferase [Pseudomonas aeruginosa 2192]
gi|126196508|gb|EAZ60571.1| methionyl-tRNA formyltransferase [Pseudomonas aeruginosa 2192]
Length = 314
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 128/318 (40%), Positives = 179/318 (56%), Gaps = 13/318 (4%)
Query: 1 MT--LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M+ LR+VF GT EFA L+AL+ + H IV+VYTQP RPAG RG K + SAV A E
Sbjct: 1 MSQALRIVFAGTPEFAAEHLKALLDTPHRIVAVYTQPDRPAG-RGQKLMPSAVKSLALEH 59
Query: 59 SLPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP + P E + + AD+ VVVAYGL++PQ +L+ +LG N HASLLPRWR
Sbjct: 60 GLPVMQPQSLRNAEAQAELAALRADLMVVVAYGLILPQAVLDIPRLGCINSHASLLPRWR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPIQRA+ AGD E+G+ +M+M+ LDTGP+ PIS+ L L+ L A
Sbjct: 120 GAAPIQRAVEAGDAESGVTVMQMEAGLDTGPMLLKVSTPISAADTGGSLHDRLAALGPKA 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+VEA+ L L Q + TYA K++K E R+++ R A + +RA +P+P
Sbjct: 180 VVEAIAGLAAGTLHGEIQDDALATYAHKLNKDEARLDWSRPAVELERQVRAFTPWPVCHT 239
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +K+L + L +G G PG ++ +AC +GA+R+ RLQ GG+ L
Sbjct: 240 SLADAP----LKVLGASLGQGSGAPGTILEASRDGLLVACGEGALRLTRLQLPGGKPLAF 295
Query: 295 GDFLLGCP--VIIGCIVG 310
D G ++G
Sbjct: 296 ADLYNSRREQFAAGQVLG 313
>gi|225574497|ref|ZP_03783107.1| hypothetical protein RUMHYD_02574 [Blautia hydrogenotrophica DSM
10507]
gi|225038284|gb|EEG48530.1| hypothetical protein RUMHYD_02574 [Blautia hydrogenotrophica DSM
10507]
Length = 319
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 102/315 (32%), Positives = 164/315 (52%), Gaps = 12/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+RV+FMGT +FAV TL ALV + H +++V TQP +P G RG + V ++A L
Sbjct: 5 KMRVIFMGTPDFAVGTLNALVEADHEVLAVVTQPDKPRG-RGKNLCCTPVKEEALRHGLA 63
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ E+ + + VVVA+G +IP+ IL G N HASLLP++RGAA
Sbjct: 64 VCQPKKVRDPEFIETLRQLKPEAIVVVAFGQIIPKEILEMAPYGCLNVHASLLPKYRGAA 123
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ G+ E+G+ IM+MD+ LDTG + V + L +LS + A +VE
Sbjct: 124 PIQWAVIDGEKESGVTIMRMDEGLDTGDMISRSVVSLDPKETGGSLFDKLSQVGAKLLVE 183
Query: 181 AMDKLEQNNLPLSPQI-ENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+++++ Q ++ YA I K +++ A + IR LSP+P A+ +
Sbjct: 184 TLEQVKNGQAVYERQPEQSPTAYASMIDKKMGNIDWTMPAVKIERLIRGLSPWPSAYTFL 243
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +K+ +++V E +PGE+ +A +G + + +Q G R +
Sbjct: 244 EG----KTLKIWAARVVQEETTARPGEIFHTDKRGIYVAAGEGVLCLDEVQLEGKRRMAA 299
Query: 295 GDFLLGCPVIIGCIV 309
DFL GC + G +
Sbjct: 300 ADFLRGCKIEKGTRL 314
>gi|290477162|ref|YP_003470077.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Xenorhabdus bovienii SS-2004]
gi|289176510|emb|CBJ83319.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Xenorhabdus bovienii SS-2004]
Length = 315
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 113/315 (35%), Positives = 171/315 (54%), Gaps = 15/315 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F G +FAV L AL+ S H +V V T+P +PAG RG K S V A+E S+
Sbjct: 4 SLRIIFAGNPDFAVHHLAALLKSQHQVVGVLTRPDKPAG-RGKKLTPSPVKALAEEHSIS 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E + + AD+ +VVAYGL++PQ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPKTLRTEESQQWIMHQQADIMIVVAYGLILPQAVLDIPRLGCLNVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETGI IM+MD LDTG + PI++ ++ L ++L+ + A++
Sbjct: 123 PIQRAIWAGDQETGITIMQMDAGLDTGNMLLKAACPITNQDTSSSLYEKLANIGPDALLN 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + N S Q TYAEK+SK E ++++ A + +R+ +P+P ++ +
Sbjct: 183 TLDLIILGNCQPSIQDGTLATYAEKLSKDEAKMDWHLPAIQLERCVRSFNPWPMSFF--L 240
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
I ++ E+ + PG +I IA S G + I +LQ +G + + DF
Sbjct: 241 IDEYPIKVWHAEAIAEQTTHSPGTIIKADKKGIQIATSDGILNITQLQASGKKAMPAADF 300
Query: 298 LL--------GCPVI 304
L G +
Sbjct: 301 LNSKRDWFTPGNKIK 315
>gi|293374988|ref|ZP_06621283.1| methionyl-tRNA formyltransferase [Turicibacter sanguinis PC909]
gi|325843336|ref|ZP_08167919.1| methionyl-tRNA formyltransferase [Turicibacter sp. HGF1]
gi|292646398|gb|EFF64413.1| methionyl-tRNA formyltransferase [Turicibacter sanguinis PC909]
gi|325489365|gb|EGC91738.1| methionyl-tRNA formyltransferase [Turicibacter sp. HGF1]
Length = 310
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 105/316 (33%), Positives = 175/316 (55%), Gaps = 14/316 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT RVVFMGT +F+V L+ ++ + +V V TQP RP G R + V +KA E +
Sbjct: 1 MT-RVVFMGTPDFSVPVLETIIREGYEVVGVVTQPDRPVG-RKRILTPTPVKQKAMEHGI 58
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P P K+ + +Y+Q L++N D+ V A+G +IP+ +L+A K G N HASLLP++RG A
Sbjct: 59 PVFQPEKIKE-DYDQVLAWNPDLIVTAAFGQIIPKILLDAPKHGCINVHASLLPKYRGGA 117
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI +AI+ G+ ETG+ IM MD +DTG + VPI +T + ++LSV A + E
Sbjct: 118 PIHKAIIDGETETGVTIMYMDVKMDTGDMISKVVVPIGEKDHTGSMFEKLSVAGAELLKE 177
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ KL + +PQ T+A I + + R+++ + A ++N +R L P+P A+ ++
Sbjct: 178 TLPKLLAGEIEATPQNHEEATFAWNIKREDERIDWYKPATTLYNQVRGLHPWPVAFTQLD 237
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDI 294
+K+ ++ + +PG ++ +AC A ++I +Q +G + +D+
Sbjct: 238 D----LAVKIWWAEPNNHLYDAEPGTIVKVEKDGIVVACGDHAGLKITDIQISGKKRMDV 293
Query: 295 GDFLLG-CPVIIGCIV 309
L G P+ +G
Sbjct: 294 ASLLNGSHPIEVGKKF 309
>gi|289422343|ref|ZP_06424193.1| methionyl-tRNA formyltransferase [Peptostreptococcus anaerobius
653-L]
gi|289157288|gb|EFD05903.1| methionyl-tRNA formyltransferase [Peptostreptococcus anaerobius
653-L]
Length = 309
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 94/308 (30%), Positives = 163/308 (52%), Gaps = 11/308 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT E AV +L+ L+ H + +V TQP RP G RG K +S V + A E +
Sbjct: 1 MRIVFMGTPEIAVDSLKKLIDDGHDVCAVVTQPDRPKG-RGKKLAMSPVKELALEKGIDV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K EE+ + + D+ VV+A+G ++ + +L+ K+G N H S+LP++RGAAP
Sbjct: 60 LQPEKASSEEFVEKIRGLEPDLIVVIAFGQILKKDLLDIPKIGCINVHVSILPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I ++ G+ +TG+ IM MD+ LDTG + ++ P+ ++ L + V A + +
Sbjct: 120 INWVLINGEEKTGVTIMFMDEGLDTGDIITCKEFPLDIDMTAGDLHDLMMVEGAELLGKT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE N + Q +YA + + ++F R+A VHN +R P+PGAW
Sbjct: 180 VKDLESGNYTRTAQNHEEYSYAPMMDRDLGHIDFSRTAREVHNLVRGTIPWPGAWT---- 235
Query: 242 GNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +IK+ +++L + + + G ++ IAC + ++ LQ + + +
Sbjct: 236 MSDMGKIKIWKTRLTGKKTDKETGTIVSQTKEGLEIACKDETILVLELQVPNKKRMPFSE 295
Query: 297 FLLGCPVI 304
F+ G +
Sbjct: 296 FIKGNRLE 303
>gi|209542529|ref|YP_002274758.1| methionyl-tRNA formyltransferase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209530206|gb|ACI50143.1| methionyl-tRNA formyltransferase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 305
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 118/312 (37%), Positives = 180/312 (57%), Gaps = 12/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ FMGT +FAV L AL + H I VY+QPPRPAG RG VH A+ +P
Sbjct: 1 MRLAFMGTPDFAVPALHALHEAGHEIAVVYSQPPRPAG-RGQAVRPQPVHLAAEALGIPV 59
Query: 63 LVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
VPT+L + F + + D AVV AYGL++P +L+A + G N HASLLPRWRGAA
Sbjct: 60 RVPTRLRANHDEHAFFRALDLDAAVVAAYGLILPGAMLDAPRRGCLNVHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI+AGD+E+G+ IM+MD+ LDTG + +V ++ + L +L A
Sbjct: 120 PIQAAILAGDDESGVTIMQMDEGLDTGAMLLTGRVALTPATTASTLHDDL---AAMGGRL 176
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L + PQ G TYA ++++ + R+++ R A ++ +RAL+P+PG + +
Sbjct: 177 IVAALANSETAAIPQPAEGATYAARLTREDGRIDWTRDAVDIDRQVRALTPWPGTFTTLD 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+K+ + ++G + PG V++ T+AC QG +R+ R+QR G +++ FL
Sbjct: 237 GT----VLKIGAATPIDGPRDAVPGTVLDDRLTVACGQGTLRLTRIQRPGRGMMEADAFL 292
Query: 299 LGCPVIIGCIVG 310
G PV +G +G
Sbjct: 293 RGQPVPVGTRLG 304
>gi|319404988|emb|CBI78591.1| Methionyl-tRNA formyltransferase [Bartonella sp. AR 15-3]
Length = 309
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 152/307 (49%), Positives = 199/307 (64%), Gaps = 2/307 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR+ FMGT F+V L AL+ + H IV+VYTQPPRPAGRRGLK S V A++ S+
Sbjct: 1 MALRLSFMGTPSFSVPILHALLEAGHDIVAVYTQPPRPAGRRGLKLSPSPVQIAAKDKSI 60
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P EE QF + DVAVVVAYGL++P+ IL + + G +N HASLLPRWRGA
Sbjct: 61 PVFTPQTLKTAEEQIQFAELSVDVAVVVAYGLLLPKSILESPRFGCFNVHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMA D ETGI IMKMD+ LDTGP+A V I+ N+ L ++LS + A +V
Sbjct: 121 APIQRAIMADDQETGIVIMKMDEGLDTGPIALSHSVAITDNMTAYELSEKLSHIGAKLIV 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + LE++ L L PQ G+TYA KI K ET++++ +SA+++H HI ALSP PG W M
Sbjct: 181 ETLSALEKDQLKLIPQSSKGVTYAVKIRKEETQIDWTKSAKSIHKHICALSPTPGCWCNM 240
Query: 240 MIGNKHERIKLLESQLVEGEG-KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
I K ER+K+L S+L+E + G + + C QG + I LQR+GG++LD FL
Sbjct: 241 NINGKQERVKILGSRLIEKSSLEIGRIEPEQLIVHCGQGCIEITHLQRSGGKLLDRSKFL 300
Query: 299 LGCPVII 305
G +
Sbjct: 301 RGANISA 307
>gi|254476998|ref|ZP_05090384.1| methionyl-tRNA formyltransferase [Ruegeria sp. R11]
gi|214031241|gb|EEB72076.1| methionyl-tRNA formyltransferase [Ruegeria sp. R11]
Length = 301
Score = 190 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 150/308 (48%), Positives = 187/308 (60%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +F+V L ALV+ H I +VY QPPRPAG RG K + VH +A E L
Sbjct: 1 MRIVFMGTPDFSVPVLDALVADGHEIAAVYCQPPRPAG-RGKKDRPTPVHARATELGLEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G ++ +F + ADVAVVVAYGL++PQ +L+A G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKGADQQAEFAALGADVAVVVAYGLILPQAVLDAPHHGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD ETG+ IM+M+ LDTGPV I S TA L LS + A +V+A
Sbjct: 120 IHRAIMAGDAETGVCIMQMEAGLDTGPVLMREATAIGSEETTAQLHDRLSDMGAALIVQA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q E G+TYA KI K E RV++ R A V IR LSPFPGAW E+
Sbjct: 180 L--RRLPELTADVQPEEGVTYAHKIDKAEARVDWTRPAAEVDRQIRGLSPFPGAWCEI-- 235
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+R+KLL S+L EG G G V++ + +AC GAV ++RLQRAG D FL G
Sbjct: 236 --DGQRVKLLASRLTEGTGPAGVVLDDSLRVACGDGAVELLRLQRAGKGAQDREVFLNGF 293
Query: 302 PVIIGCIV 309
PV G +
Sbjct: 294 PVGAGTQL 301
>gi|291547146|emb|CBL20254.1| methionyl-tRNA formyltransferase [Ruminococcus sp. SR1/5]
Length = 314
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 93/314 (29%), Positives = 167/314 (53%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++++MGT +FAVA L AL + + + +V TQP +P G RG + + V ++A + +P
Sbjct: 1 MKIIYMGTPDFAVAPLAALAENGYEVEAVITQPDKPKG-RGKTMMPTPVKEEALKHGIPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K+ E+ + L D+ +V A+G +IP+ IL+ + G N HASLLP++RGAAP
Sbjct: 60 LQPVKVRDPEFVEELKNLAPDIIIVAAFGQIIPKSILDMPRFGCINIHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ+A++ G+ E+G+ IM+M LDTG + VP++ + L +L+ A +V+
Sbjct: 120 IQQAVIDGEKESGVTIMQMGTGLDTGDMISKIVVPLAKDETGGSLFDKLAQAGAELLVQT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETR-VNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q E T + + ++F ++AE + +R L P+P A+ +
Sbjct: 180 LPSIFDGTATREKQPEESPTPYAAMISKKMGLLDFSKNAEELERLVRGLDPWPSAFTFI- 238
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ +S ++E + + PG VI +AC Q + + +Q G + ++
Sbjct: 239 ---NGKTLKVWKSSVLEKQAQEAPGTVIAADKGGIQVACGQKVLVLHEVQLEGKKRMEAD 295
Query: 296 DFLLGCPVIIGCIV 309
FL G + G +
Sbjct: 296 AFLRGYQLKPGDMF 309
>gi|148556942|ref|YP_001264524.1| methionyl-tRNA formyltransferase [Sphingomonas wittichii RW1]
gi|166215516|sp|A5VDM0|FMT_SPHWW RecName: Full=Methionyl-tRNA formyltransferase
gi|148502132|gb|ABQ70386.1| methionyl-tRNA formyltransferase [Sphingomonas wittichii RW1]
Length = 308
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 128/310 (41%), Positives = 178/310 (57%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ FMGT +FAV TL ALV++ H + +VY QPPRPAG RG + S V ++A+E +P
Sbjct: 1 MRIAFMGTPDFAVPTLDALVAAGHELAAVYCQPPRPAG-RGKALMPSPVQRRAEELGIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + F + DVAVV AYGL++PQ IL+A + G N H SLLPRWRGAAP
Sbjct: 60 RHPVTLRDADAQAVFAALALDVAVVAAYGLILPQPILDAPRHGCLNVHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRAI+AGD TG+ IM+M++ LDTGP+ + P+ + A +
Sbjct: 120 VQRAILAGDPTTGVTIMQMERGLDTGPMLATVETPVDGKTAGELTDELARSGAALMVEVL 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
D P Q E G+TYA KI K E+R++F +A + +RA +P PGAW E
Sbjct: 180 ADLPAH---PPVVQPEEGVTYAAKIDKAESRIDFAEAAGQIERQVRAFNPAPGAWFE--- 233
Query: 242 GNKHERIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
++ ERI++L + V+ G PG VI+ TIAC GA+R R+QRAG + G+ L
Sbjct: 234 -HQGERIRILACEAVDRHGPEAPGAVIDDALTIACIDGAIRPTRVQRAGKAAMSAGELLR 292
Query: 300 GCPVIIGCIV 309
G + G +
Sbjct: 293 GFAIPAGTQL 302
>gi|330831511|ref|YP_004394463.1| methionyl-tRNA formyltransferase [Aeromonas veronii B565]
gi|328806647|gb|AEB51846.1| Methionyl-tRNA formyltransferase [Aeromonas veronii B565]
Length = 314
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 113/316 (35%), Positives = 178/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+++F GT +FA L AL+SS H +V+VYTQP +PAG RG K S V + A +LP
Sbjct: 3 KLKLIFAGTPDFAARHLAALLSSDHEVVAVYTQPDKPAG-RGQKLTASPVKELALAHNLP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E + + AD+ VVVAYGL++P+ +L+ LG N H SLLPRWRGAA
Sbjct: 62 VYQPASLRKEEAQAELAALGADLMVVVAYGLILPKAVLDTPHLGCINVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + PI+++ +A L +L+ L A+V+
Sbjct: 122 PIQRSIWAGDAETGVTIMQMDVGLDTGAMIRKVTCPIAADETSASLYDKLAELGPQALVD 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ + Q + YAEK+SK E R+++ A + IR+ +P+P +W E+
Sbjct: 182 TINAMAAGETAAEAQDDTLANYAEKLSKEEARIDWSMDAVAIERCIRSFNPWPISWFEVA 241
Query: 241 IGNKHERIKLLESQLVEGE-GKP-GEVINP---NFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +++ + G+P G ++ IA +G +R++ LQ G + + +
Sbjct: 242 D----QTVKVWQAAVIDSDHGQPAGTLLKADKQGIDIATGKGVLRLLTLQPPGKKAMSVS 297
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 298 DLLNSRRDWFEPGTQL 313
>gi|229134674|ref|ZP_04263483.1| Methionyl-tRNA formyltransferase [Bacillus cereus BDRD-ST196]
gi|228648720|gb|EEL04746.1| Methionyl-tRNA formyltransferase [Bacillus cereus BDRD-ST196]
Length = 314
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 104/313 (33%), Positives = 162/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + +V V TQP RP G R + V +A++ +P
Sbjct: 2 MKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P ++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 VQPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + +++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQSEAEVTFAYNIKREQEIIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E + + +PG ++ F +A V+I LQ +G + + F
Sbjct: 240 -GQVIKVWWGEKVSITEKTEPGTIVALEEDGFVVATGNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|329926621|ref|ZP_08281034.1| methionyl-tRNA formyltransferase [Paenibacillus sp. HGF5]
gi|328939162|gb|EGG35525.1| methionyl-tRNA formyltransferase [Paenibacillus sp. HGF5]
Length = 313
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 89/313 (28%), Positives = 163/313 (52%), Gaps = 7/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT FAV +L+ L++ ++I +V TQP RP G R + V + A +P
Sbjct: 1 MNIVFMGTPAFAVPSLEMLIAEGYTIAAVVTQPDRPQG-RKKVLTPTPVKEAALRHGIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + E + + D+ V AYG ++P+ +L+ LG N H SLLP +RG AP
Sbjct: 60 LQPQRLRNPEAVAELAEYKPDLIVTAAYGQILPKSVLDMPALGCLNVHGSLLPAYRGGAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQR+I+ G++ TGI +M M + LDTG + +VPI + + ++LS A +
Sbjct: 120 IQRSIINGESVTGITLMYMAEGLDTGDMIARAEVPIEDDDTAGTMFEKLSQAGAELLRRE 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM-- 239
+ +L + + PQ ++ TYA +++ + ++++ R++ +++ IR L P+ G +
Sbjct: 180 LPRLVKGKVEAEPQDDSKATYAPNLTRDDEKIDWSRTSREIYDQIRGLVPYSGGFTLWNG 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K +Q G+ +PG V+ + G + ++ +Q +G + +D
Sbjct: 240 EVFKVWAAVKPDSAQKASGDAQPGTVLELQEKGIVVKTGDGTLTLLTVQPSGKKAMDAAQ 299
Query: 297 FLLGCPVIIGCIV 309
F+ G + G ++
Sbjct: 300 FVRGTSLTAGTVL 312
>gi|260599607|ref|YP_003212178.1| methionyl-tRNA formyltransferase [Cronobacter turicensis z3032]
gi|260218784|emb|CBA34132.1| Methionyl-tRNA formyltransferase [Cronobacter turicensis z3032]
Length = 315
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 118/316 (37%), Positives = 177/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SSSH +V V+TQP RPAG RG K + V AQE +P
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSSHQVVGVFTQPDRPAG-RGKKLMPGPVKVLAQENDIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E + NADV VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 IFQPKSLRPAENQALVSALNADVMVVVAYGLILPEAVLAMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD+ETG+ IM+MDK LDTG + PI+++ +A L ++L+ L ++
Sbjct: 123 PIQRSLWAGDSETGVTIMQMDKGLDTGDMLRKLSCPITADDTSASLYEKLAQLGPQGLLA 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L Q + TYA+K+SK E R+++ SA + IRA +P+P ++ +
Sbjct: 183 TLEDLATGRAVPEKQDDAQATYADKLSKEEARLDWTLSAGQLERCIRAFNPWPVSFFMID 242
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++ +G PG V+ IA + G + + LQ AG + +
Sbjct: 243 D----QPVKVWKASVIHQQGNAAPGTVLDAGKQGVQIATADGILNLEELQPAGKKPMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G I+
Sbjct: 299 DLLNSRREWFTPGAIL 314
>gi|291280366|ref|YP_003497201.1| methionyl-tRNA formyltransferase [Deferribacter desulfuricans SSM1]
gi|290755068|dbj|BAI81445.1| methionyl-tRNA formyltransferase [Deferribacter desulfuricans SSM1]
Length = 310
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 95/315 (30%), Positives = 152/315 (48%), Gaps = 15/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ VVFMGT E AV TL+ L+ + ++ V QP +P G RG K V + A + +L
Sbjct: 1 MNVVFMGTPEIAVPTLKELIDNDINVSLVVCQPDKPKG-RGKKLTPPPVKEFALQHNLEV 59
Query: 63 LVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ + Y++ N D VVVAYG ++P+ IL+ K G N H SLLP++RGAA
Sbjct: 60 YQPDKIKNNQEAYDKIKFCNPDFLVVVAYGKILPKEILDVPKKGPINVHFSLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ AI+ G+ +TG+ M MD LDTG + + + L + +
Sbjct: 120 PVNWAIINGEEKTGVTTMLMDTGLDTGDILLKEETFVDKKTAPELLDELSITGAKLLIKT 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +++ Q + TYA + K + +NF A + IR L P+P A+ +
Sbjct: 180 LTN---FDDITPIKQDDEQATYAPILKKEDGIINFDEDATIIERKIRGLQPWPSAYTYL- 235
Query: 241 IGNKHERIKLLESQLVEGEG--KPGE---VINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ E+ +V+ +PG + NF + C A+ I LQ G + ++
Sbjct: 236 ---NGKILKIFEADVVKDNTEVEPGTIFDITKKNFKVKCKSDALVIKELQFEGKKRMNTA 292
Query: 296 DFLLGCPVIIGCIVG 310
FL G + G +G
Sbjct: 293 AFLSGYKLENGLKLG 307
>gi|238783196|ref|ZP_04627222.1| Methionyl-tRNA formyltransferase [Yersinia bercovieri ATCC 43970]
gi|238715992|gb|EEQ07978.1| Methionyl-tRNA formyltransferase [Yersinia bercovieri ATCC 43970]
Length = 315
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 114/316 (36%), Positives = 174/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K S V A++ +P
Sbjct: 4 SLRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAG-RGNKLTPSPVKVLAEQQGIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE + ++ D+ VVVAYGL++P +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPKSLRPEENQHLVADLNADIMVVVAYGLILPASVLAMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD +TG+ IM+MD LDTG + + I +A L +L+ L ++
Sbjct: 123 PIQRSVWAGDAKTGVTIMQMDVGLDTGDMLHKIECDIQPEDTSATLYDKLAQLGPQGLLI 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + Q E +TYAEK+SK E ++++ SA + IRA +P+P ++ +
Sbjct: 183 TLQQLAEGRAQPEVQDEAQVTYAEKLSKEEAKLDWSLSAAQLERCIRAFNPWPVSYFVV- 241
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ +++++ KPG +I +A +QG + I +LQ AG + +
Sbjct: 242 ---DEQPVKVWQAEVLPAVDNTKPGTIIHADKHGIQVATAQGVLNITQLQPAGKKAMSAA 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 299 DLLNSRREWFTPGNQL 314
>gi|118578952|ref|YP_900202.1| methionyl-tRNA formyltransferase [Pelobacter propionicus DSM 2379]
gi|166215495|sp|A1ALC4|FMT_PELPD RecName: Full=Methionyl-tRNA formyltransferase
gi|118501662|gb|ABK98144.1| methionyl-tRNA formyltransferase [Pelobacter propionicus DSM 2379]
Length = 319
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 114/315 (36%), Positives = 170/315 (53%), Gaps = 10/315 (3%)
Query: 1 MTLR-VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M+ R +VFMGT EFA TLQAL+ +++V TQP RP G RG K + V + A
Sbjct: 1 MSSRSIVFMGTPEFACPTLQALIDRGERLLAVVTQPDRPKG-RGHKLMPPPVKELALAHD 59
Query: 60 LPALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P ++ E ++ VVVA+G ++P+ +L+ LG N HASLLPR+RG
Sbjct: 60 IPVLQPHRVRASAFVESIRQLAPELIVVVAFGQILPKALLDIPPLGCVNVHASLLPRYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+ I+ G+ ETG+ M MD LDTGP+ R PI N + L ++ L A +
Sbjct: 120 AAPLNWCIINGETETGVTTMLMDTGLDTGPMLLKRSTPIDENEDIVSLHDRMASLGAELL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
E +D L + + PQ ++ YA + K +++ R A +HN +R L+ +PGA
Sbjct: 180 AETLDGLREGRIEPQPQNDSLSCYAPLLKKEHGLIDWQRPARQIHNQVRGLAAWPGAQTL 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +KL +++ +G G PG V+ +AC G++ I LQ AG + LD
Sbjct: 240 LNGHA----LKLFRTRVADGAGAPGTVLCSTGGQLEVACLDGSLLIQELQLAGKKRLDSA 295
Query: 296 DFLLGCPVIIGCIVG 310
FL GCP+ G ++G
Sbjct: 296 SFLAGCPIAEGTLLG 310
>gi|313111461|ref|ZP_07797262.1| methionyl-tRNA formyltransferase [Pseudomonas aeruginosa 39016]
gi|310883764|gb|EFQ42358.1| methionyl-tRNA formyltransferase [Pseudomonas aeruginosa 39016]
Length = 310
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 126/314 (40%), Positives = 177/314 (56%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L+AL+ + H IV+VYTQP RPAG RG K + SAV A E LP
Sbjct: 1 MRIVFAGTPEFAAEHLKALLDTPHRIVAVYTQPDRPAG-RGQKLMPSAVKSLALEHGLPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P E + + AD+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAAP
Sbjct: 60 MQPQSLRNAEAQAELAALRADLMVVVAYGLILPQAVLDIPRLGCINSHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+ AGD E+G+ +M+M+ LDTGP+ PIS+ L L+ L A+VEA
Sbjct: 120 IQRAVEAGDAESGVTVMQMEAGLDTGPMLLKVSTPISAADTGGSLHDRLAALGPKAVVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L L Q + TYA K++K E R+++ R A + +RA +P+P +
Sbjct: 180 IAGLVAGTLHGEVQDDALATYAHKLNKDEARLDWSRPAVELERQVRAFTPWPVCHTSLAD 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+K+L + L +G G PG ++ +AC +GA+R+ RLQ GG+ L D
Sbjct: 240 AP----LKVLGASLGQGSGAPGTILEASRDGLLVACGEGALRLTRLQVPGGKPLAFADLY 295
Query: 299 LGCP--VIIGCIVG 310
G ++G
Sbjct: 296 NSRREQFATGQVLG 309
>gi|238758792|ref|ZP_04619966.1| Methionyl-tRNA formyltransferase [Yersinia aldovae ATCC 35236]
gi|238703089|gb|EEP95632.1| Methionyl-tRNA formyltransferase [Yersinia aldovae ATCC 35236]
Length = 315
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 172/316 (54%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K S V A++ ++P
Sbjct: 4 SLRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAG-RGNKLTPSPVKVLAEQHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE + ++ D+ VVVAYGL++P +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPKSLRPEENQYLVADLKADIMVVVAYGLILPAAVLAMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD +TG+ IM+MD LDTG + + I +A L +L+ L ++
Sbjct: 123 PIQRSLWAGDTKTGVTIMQMDVGLDTGDMLHKIECGIQPEDTSATLYDKLAQLGPQGLLI 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+++ SA + IRA +P+P ++ +
Sbjct: 183 TLQQLADGTAQPEVQDETQVTYAEKLSKEEARLDWSLSAAQLERCIRAFNPWPVSYFVV- 241
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ ++Q++ PG +I +A + G + I +LQ AG + +
Sbjct: 242 ---DEQPIKVWQAQVLAAVENATPGIIIHADKHGIQVATADGVLNITQLQPAGKKAMSAA 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 299 DLLNSRREWFTPGNQL 314
>gi|225874678|ref|YP_002756137.1| methionyl-tRNA formyltransferase [Acidobacterium capsulatum ATCC
51196]
gi|254789329|sp|C1F542|FMT_ACIC5 RecName: Full=Methionyl-tRNA formyltransferase
gi|225794303|gb|ACO34393.1| methionyl-tRNA formyltransferase [Acidobacterium capsulatum ATCC
51196]
Length = 311
Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats.
Identities = 107/313 (34%), Positives = 160/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VF GT FAV TL+AL+ + H + V TQP RP+G RG++ + V + A LP
Sbjct: 1 MKLVFCGTPAFAVPTLEALLQAGHDVALVVTQPDRPSG-RGMQVLAPPVKQTALAAGLPV 59
Query: 63 LVPTKLGQE--EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P K+ Q + D +VVAYG +IP+ +L+ + G N HASLLP++RGAA
Sbjct: 60 VQPEKIKNNLEFRAQLEAIAPDAIIVVAYGRIIPKWMLDLPRYGNLNLHASLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A+ G+ TG M++D+ LDTG + ++ I + L L+ + A MVE
Sbjct: 120 PIQWAVAMGETVTGATTMRIDEGLDTGDMLLQDEMEIPPAMTAEELFPLLAEMGAPLMVE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ LEQ + Q E T A +++ + RV+F RSA ++N R P+PGAW +
Sbjct: 180 TLAGLEQGTVTPQKQDEAQATLAPILTREDGRVDFARSAAEIYNRWRGFQPWPGAWTMLG 239
Query: 241 IGNKHERIKLLESQLVEGEGKPG--EVINPNFTIACSQ-GAVRIMRLQRAGGRVLDIGDF 297
LL + E +PG V AC G + I LQ G + + + DF
Sbjct: 240 GKKLTLHRMLLAER--EDRAEPGMVRVHAGRLFFACGDGGWLEIAELQLEGKKRMPVTDF 297
Query: 298 LLGCPVIIGCIVG 310
L G + +G
Sbjct: 298 LRGNTLAPETRLG 310
>gi|238797212|ref|ZP_04640713.1| Methionyl-tRNA formyltransferase [Yersinia mollaretii ATCC 43969]
gi|238718849|gb|EEQ10664.1| Methionyl-tRNA formyltransferase [Yersinia mollaretii ATCC 43969]
Length = 320
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 114/316 (36%), Positives = 175/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K S V A++ +P
Sbjct: 9 SLRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAG-RGNKLTPSPVKILAEQQGIP 67
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE + ++ D+ VVVAYGL++P +L +LG N H SLLPRWRGAA
Sbjct: 68 VFQPKSLRPEENQHLVADLNADIMVVVAYGLILPASVLAMPRLGCINVHGSLLPRWRGAA 127
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD +TG+ IM+MD LDTG + + I +A L +L+ L ++
Sbjct: 128 PIQRSVWAGDAKTGVTIMQMDVGLDTGDMLHKIECDIQPEDTSATLYDKLAQLGPQGLLI 187
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + Q E +TYAEK+SK E ++++ SA + IRA +P+P ++ +
Sbjct: 188 TLQELAEGRAQPEVQDEAQVTYAEKLSKEEAKLDWSLSAAQLERCIRAFNPWPVSYFVVD 247
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++Q++ G +PG +I +A ++G + I +LQ AG + +
Sbjct: 248 EQS----VKVWQAQVLPAVGNTQPGTIIHADKHGIQVATAEGVLNITQLQPAGKKAMSAA 303
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 304 DLLNSRREWFTPGNQL 319
>gi|261823201|ref|YP_003261307.1| methionyl-tRNA formyltransferase [Pectobacterium wasabiae WPP163]
gi|261607214|gb|ACX89700.1| methionyl-tRNA formyltransferase [Pectobacterium wasabiae WPP163]
Length = 315
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 118/316 (37%), Positives = 176/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H +V V+TQP RP+G RG K S V A++ S+P
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHEVVGVFTQPDRPSG-RGNKLTPSPVKVLAEQHSIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E + +ADV VVVAYGL++PQ +L+ +LG N H SLLP WRGAA
Sbjct: 63 VFQPKSLRPAENQAMVEALSADVMVVVAYGLILPQPVLSMPRLGCINVHGSLLPLWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD+ETG+ IM+MD LDTG + PI +A L +L+ L ++E
Sbjct: 123 PIQRALWAGDSETGVTIMQMDVGLDTGAMLHKISCPILPQDTSATLYDKLAELGPRGLLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+++L + Q + TYAEK+SK E R+N+ SAE + IRA +P+P ++ +
Sbjct: 183 TLEQLADGSAVAEAQNDALATYAEKLSKEEARLNWQLSAEQLERCIRAFNPWPVSYFIV- 241
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ +++ + +PG +I +A + G + I LQ AG +V+
Sbjct: 242 ---DEQPVKVWKAEAIAKAHGLQPGTIIQAEKQGIQVATANGILNIQELQPAGKKVMSAH 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNTL 314
>gi|282850138|ref|ZP_06259517.1| methionyl-tRNA formyltransferase [Veillonella parvula ATCC 17745]
gi|282579631|gb|EFB85035.1| methionyl-tRNA formyltransferase [Veillonella parvula ATCC 17745]
Length = 336
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 97/332 (29%), Positives = 166/332 (50%), Gaps = 29/332 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT +F+V TL+AL+ + HSIV VY QP + G RG + + V A E LP
Sbjct: 7 LRIVFMGTPDFSVPTLEALIQAGHSIVGVYCQPDKQKG-RGKQVQMPPVKVAALEHDLPV 65
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ + + DV +V+AYG ++P ++ + G N HAS+LP +RGAAP
Sbjct: 66 YQPVTLRDEQVRAELEALQPDVVIVIAYGKILPPWLIRLPQYGCINVHASILPSYRGAAP 125
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD++TG+ IM MD LDTG + + ++ I T L + ++VL +V
Sbjct: 126 IHYAILNGDSKTGVTIMHMDDGLDTGDIIDIVEIDILPGETTGQLFERIAVLGGETIVPV 185
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + +PQ ++ T+ KI+K ++++ + A + N IR L+P PG + +
Sbjct: 186 LTRWVNGEIVATPQDDSMATHTTKITKEMGQIDWSKPANEIANLIRGLNPAPGCYTYL-- 243
Query: 242 GNKHERIKLLESQLVEGEGK--------------------PGEVINP--NFTIACSQG-A 278
+R+K+ ++V + PG +++ + C G
Sbjct: 244 --DGKRLKVWSGEVVPSDTTHCLIDVHGKHVPIAISATTVPGTIVSKIAGLGVFCGDGNI 301
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ + +Q + + DF+ G + G + G
Sbjct: 302 ILLTEVQPENKKRISAIDFINGHQIKEGIVFG 333
>gi|229918580|ref|YP_002887226.1| methionyl-tRNA formyltransferase [Exiguobacterium sp. AT1b]
gi|229470009|gb|ACQ71781.1| methionyl-tRNA formyltransferase [Exiguobacterium sp. AT1b]
Length = 466
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 104/313 (33%), Positives = 167/313 (53%), Gaps = 12/313 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R+VFMGT FAV+ L+ L+ +++V V +QP +P G R + + V + A +P L
Sbjct: 154 RIVFMGTPTFAVSVLERLLEEGYNVVGVVSQPDKPVG-RKRELKPTPVKECALRHGIPVL 212
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K+ +Y L D+ V AYG ++P +L A G N HASLLP++RG API
Sbjct: 213 QPEKVRT-DYADILELKPDLIVTAAYGQIVPTALLEAPPHGAINVHASLLPKYRGGAPIH 271
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+AI+ G++ETG+ IM M LD G + VPI L +L+V + ++ +
Sbjct: 272 QAILDGESETGVTIMYMVDKLDAGDMIANTIVPIEETDTVGSLFDKLAVAGSDLLIRTLP 331
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ + PQ E +T+A IS+ ++++ + E+++NHIR ++PFP A+ +
Sbjct: 332 AFLEGWIEAVPQDERDVTFAPNISREREQIDWTMNGESIYNHIRGMNPFPTAYSTL---- 387
Query: 244 KHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLL 299
ER+KL + G G+PGEV+ F +A A+++ LQ AG + +D F+
Sbjct: 388 DGERVKLFMGEKTTGSGQPGEVVRLEEDGFVVATGNDVAIKVTDLQPAGKKRMDGATFMR 447
Query: 300 GC--PVIIGCIVG 310
G + IG +G
Sbjct: 448 GAGQKLRIGDRLG 460
>gi|320539228|ref|ZP_08038899.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Serratia symbiotica str. Tucson]
gi|320030866|gb|EFW12874.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Serratia symbiotica str. Tucson]
Length = 314
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 173/316 (54%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K S+V A+ LP
Sbjct: 4 SLRIIFAGTPDFATRHLDALLSSEHQIVGVFTQPDRPAG-RGNKLTPSSVKVLAERHQLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE +Q ++ DV VVVAYGL++P+ +L+ LG N H SLLPRWRGAA
Sbjct: 63 VFQPKSLRPEENQQLVADLNADVMVVVAYGLLLPKTVLDMPHLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGDNETG+ IM+MD LDTG + PI + +A L +L+ ++
Sbjct: 123 PIQRSLWAGDNETGVTIMQMDVGLDTGDMIHKIVCPIEATDTSASLYDKLAEFGPQGLLT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L + Q E +TYAEK+SK E +++ SA + IRA +P+P ++ +
Sbjct: 183 TLQLLADGTVKREVQNEAQVTYAEKLSKEEASLDWSLSAAQLERCIRAFNPWPVSYFTV- 241
Query: 241 IGNKHERIKLLESQ--LVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ + + +PG ++ +A + G + + +LQ AG + +
Sbjct: 242 ---DGQPVKVWQASMLVETADAEPGTIVHADKHGIQVATANGILNLTQLQPAGKKPMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 299 DLLNSRRAWFTPGNQL 314
>gi|297180809|gb|ADI17015.1| methionyl-tRNA formyltransferase [uncultured Vibrionales bacterium
HF0010_22E23]
Length = 314
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 116/314 (36%), Positives = 173/314 (55%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+L+++F GT +FA + L AL+SS H +V+VYTQP RPAG RG K S V A E +LP
Sbjct: 4 SLKIIFAGTPDFAASHLAALLSSHHEVVAVYTQPDRPAG-RGKKLTPSDVKALAVEHNLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE +Q L+ D+ VVVAYGL++P+ +L+ +LG N H S+LP+WRGAA
Sbjct: 63 VYQPVSLKNEEAQQELATIEADIMVVVAYGLILPKAVLDTPRLGCINVHGSILPKWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ IM+MD+ LDTG + + +V I +A L Q L+ + A+VE
Sbjct: 123 PIQRAVWAGDKETGVTIMQMDEGLDTGDMLKITRVDIDPQETSASLYQRLADIGPQALVE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + Q + T+A+K+SK E R+++ SA + IRA + +P ++ +
Sbjct: 183 CLDDISAGKTEAVKQDDALATHAKKLSKEEARIDWQLSAVEIERCIRAFNSWPMSYFTVG 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
N ++ + E PG VI +A G + + LQ G + + D
Sbjct: 243 DNN--VKVWASKVTHSETSEAPGTVIATSKRGIDVATGDGVLSLTSLQPPGKKAMSAADI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNARRDWFEVGNTL 314
>gi|296115066|ref|ZP_06833708.1| methionyl-tRNA formyltransferase [Gluconacetobacter hansenii ATCC
23769]
gi|295978403|gb|EFG85139.1| methionyl-tRNA formyltransferase [Gluconacetobacter hansenii ATCC
23769]
Length = 308
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 118/310 (38%), Positives = 174/310 (56%), Gaps = 10/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ FMGT +FAV LQAL ++ H IV VYTQPPRPAG RG K S VH AQE +
Sbjct: 1 MRLAFMGTPDFAVPALQALHAAGHEIVVVYTQPPRPAG-RGKKERPSPVHVAAQELGIAV 59
Query: 63 LVP--TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E++ F + D AVV AYGL++P +L++ G N HASLLPRWRGAA
Sbjct: 60 RTPLSLRRDTAEHDHFTALRLDAAVVAAYGLILPVAMLDSPAHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI+AGD E+G+ IM+MD LDTG + +V ++ L +L+ + A +V
Sbjct: 120 PIQAAILAGDRESGVTIMQMDAGLDTGAMLCEGRVALTPRTTATSLHDDLAAMGARLVV- 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + P PQ E G+TYA ++++ + R+ + R A+ + +RA++P+PG + +
Sbjct: 179 ---ETLRTIPPPRPQPEEGVTYAARLTREDGRLRWDRPADMLDRQVRAMTPWPGTFTLLA 235
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLL 299
+ +I + PG +++ +AC G +RI RLQR G +++ FL
Sbjct: 236 --GETIKIGAVTMDPTPTTAAPGTIVDDRLLVACGNGTTLRITRLQRPGRGMMEADAFLR 293
Query: 300 GCPVIIGCIV 309
G V G
Sbjct: 294 GQAVPTGTRF 303
>gi|227328918|ref|ZP_03832942.1| methionyl-tRNA formyltransferase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 315
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 120/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS + +V V+TQP RPAG RG K S V A++ S+P
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGNEVVGVFTQPDRPAG-RGNKLTPSPVKVLAEQHSIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E + NADV VVVAYGL++PQ +L+ +LG N H SLLP WRGAA
Sbjct: 63 VFQPKSLRPEENQAMVQALNADVMVVVAYGLILPQPVLSMPRLGCINVHGSLLPLWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD+ETG+ IM+MD LDTG + PI +A L +L+ L ++E
Sbjct: 123 PIQRALWAGDSETGVTIMQMDVGLDTGAMLHKISCPILQQDTSATLYDKLAELGPRGLLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+++L + Q + TYAEK+SK E R+N+ SAE + IRA +P+P ++ +
Sbjct: 183 TLEQLADGSAVAEVQNDALATYAEKLSKEEARLNWQLSAEQLERCIRAFNPWPVSYFIV- 241
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ +++++ E +PG +I +A + G + I LQ AG +V+
Sbjct: 242 ---DEQPVKVWKAEVITKEHGSQPGTIIQADKQGIQVATADGILNIQELQPAGKKVMGAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNTL 314
>gi|84514538|ref|ZP_01001902.1| methionyl-tRNA formyltransferase [Loktanella vestfoldensis SKA53]
gi|84511589|gb|EAQ08042.1| methionyl-tRNA formyltransferase [Loktanella vestfoldensis SKA53]
Length = 299
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 144/308 (46%), Positives = 188/308 (61%), Gaps = 11/308 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT EF+V L ALV++ H IV+VYTQPPRPAG RG K AVH +A E LP
Sbjct: 1 MRIIFMGTPEFSVPVLDALVAAGHDIVTVYTQPPRPAG-RGKKDRPQAVHLRALELGLPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L + + + D+AVVVAYGL++PQ +L+A +LG N HASLLPRWRGAAP
Sbjct: 60 RHPVGLRNPQAQTEFADLNADIAVVVAYGLILPQAVLDAPRLGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD +TG+ IM+M+ LDTGPV I+++ T L LS + A +VEA
Sbjct: 120 IHRAIMAGDAQTGVCIMQMEAGLDTGPVLLREATDIAADDTTGALHDRLSAMGARLVVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L PQ + G+TYA KI K E RV++ + A V I LSPFPGAW ++
Sbjct: 180 L--RRLPDLTPEPQPDEGVTYAAKIDKAEGRVDWAQPAATVARQINGLSPFPGAWCDVAG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KLL ++ +G PG V+ FTIAC+ GAV I QR G R + D L G
Sbjct: 238 ----ERVKLLGAETADGNAAPGTVL-DGFTIACATGAVTITTAQREGKRAMPAADVLNGL 292
Query: 302 PVIIGCIV 309
+ G +
Sbjct: 293 SL--GDRL 298
>gi|163738222|ref|ZP_02145638.1| methionyl-tRNA formyltransferase [Phaeobacter gallaeciensis BS107]
gi|161388838|gb|EDQ13191.1| methionyl-tRNA formyltransferase [Phaeobacter gallaeciensis BS107]
Length = 301
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 142/308 (46%), Positives = 191/308 (62%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +F+V L ALV + H I +VY QPPRPAG RG K + VH +A+
Sbjct: 1 MRIVFMGTPDFSVPVLDALVEAGHDIAAVYCQPPRPAG-RGKKDRPTPVHARAEALGFEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ +F + NADVAVVVAYGL++PQ +L+A + G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKDAQQQAEFAALNADVAVVVAYGLILPQAVLDAPRQGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD +TG+ IM+M+ LDTGPV I + TA L LS + A +V+A
Sbjct: 120 IHRAIMAGDAQTGVCIMQMEAGLDTGPVLMREATDIGAEETTAQLHDRLSEMGAELIVQA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + L Q ++G+TYA KI K E RV++ R A V IR LSPFPGAW E+
Sbjct: 180 L--TQLTKLTPVVQPDDGVTYAHKIDKSEARVDWTRPAVEVDQQIRGLSPFPGAWCEI-- 235
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+R+KLL S++V+G G G V++ + IAC +GAV +++LQRAG + FL G
Sbjct: 236 --DGQRVKLLASRVVDGAGAAGRVLDDSLRIACGEGAVELLKLQRAGKGAQEREIFLRGF 293
Query: 302 PVIIGCIV 309
P+ G +
Sbjct: 294 PIAAGTDL 301
>gi|148380463|ref|YP_001255004.1| methionyl-tRNA formyltransferase [Clostridium botulinum A str. ATCC
3502]
gi|153931476|ref|YP_001384686.1| methionyl-tRNA formyltransferase [Clostridium botulinum A str. ATCC
19397]
gi|153934523|ref|YP_001388207.1| methionyl-tRNA formyltransferase [Clostridium botulinum A str.
Hall]
gi|148289947|emb|CAL84060.1| putative methionyl-tRNA formyltransferase [Clostridium botulinum A
str. ATCC 3502]
gi|152927520|gb|ABS33020.1| methionyl-tRNA formyltransferase [Clostridium botulinum A str. ATCC
19397]
gi|152930437|gb|ABS35936.1| methionyl-tRNA formyltransferase [Clostridium botulinum A str.
Hall]
gi|322806776|emb|CBZ04345.1| methionyl-tRNA formyltransferase [Clostridium botulinum H04402 065]
Length = 313
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 91/318 (28%), Positives = 168/318 (52%), Gaps = 16/318 (5%)
Query: 3 LR---VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
++ +VFMGT +FAV +L+ L+ ++ +V+TQP RP G RG K +SAV + A + +
Sbjct: 1 MKDTTIVFMGTPDFAVPSLKKLIE-EFNVKAVFTQPDRPKG-RGKKLAMSAVKEVALQNN 58
Query: 60 LPALVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+ P K + ++ + D +VVA+G ++ + +LN K G N HASLLP++R
Sbjct: 59 IEVYQPIKLKNDEICIKKLKEISPDFIIVVAFGQILSKEVLNIPKYGCINLHASLLPKYR 118
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI AI+ G+NE+G M MD+ LDTG + V I ++ L L +
Sbjct: 119 GAAPINWAIIKGENESGNTTMFMDEGLDTGDMLLKNTVKIEDDMTFGELHDILMESGSEL 178
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+V+ + L++ + Q I YA ++K ++++ ++++ ++ IR L+P P A+
Sbjct: 179 LVDTIKGLKEGTIEREKQKSENIIYASMLNKQMGKIDWNKTSKEINLLIRGLNPRPVAYT 238
Query: 238 EMMIGNKHERIKLLESQLVE--GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVL 292
+ +E +K+ S +++ PG ++ +A G + I +Q G + +
Sbjct: 239 QYK----NETMKIYNSSILKESSNKTPGTILKVSKEGIKVATGDGILSITTVQFPGKKPM 294
Query: 293 DIGDFLLGCPVIIGCIVG 310
+ +++ G + G ++G
Sbjct: 295 KVEEYIKGHTIEEGLVLG 312
>gi|123444065|ref|YP_001008035.1| methionyl-tRNA formyltransferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|166215598|sp|A1JRZ2|FMT_YERE8 RecName: Full=Methionyl-tRNA formyltransferase
gi|122091026|emb|CAL13909.1| methionyl-tRNA formyltransferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 315
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 113/307 (36%), Positives = 171/307 (55%), Gaps = 11/307 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K S V A++ +P
Sbjct: 4 SLRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAG-RGNKLTPSPVKVLAEQHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE + ++ D+ VVVAYGL++P +L +LG N H SLLPRWRGAA
Sbjct: 63 IFQPKSLRPEENQHLVADLNADIMVVVAYGLILPASVLAMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD +TG+ IM+MD LDTG + + I +A L +L+ L ++
Sbjct: 123 PIQRSLWAGDAKTGVTIMQMDVGLDTGDMLHKIECDIQPEDTSATLYDKLAQLGPQGLLV 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + + Q E +TYAEK+SK E ++++ SA + IRA +P+P ++ +
Sbjct: 183 TLQQLAEGSAQPEVQDEAQVTYAEKLSKEEAKLDWSLSAVQLERCIRAFNPWPVSYFVV- 241
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ ++Q++ PG +I +A + G + I +LQ AG + +
Sbjct: 242 ---DEQPIKVWQAQVLATVDNAAPGTIIHADKHGIQVATADGVLNITQLQPAGKKAMSAA 298
Query: 296 DFLLGCP 302
D L
Sbjct: 299 DLLNSRR 305
>gi|167772293|ref|ZP_02444346.1| hypothetical protein ANACOL_03670 [Anaerotruncus colihominis DSM
17241]
gi|167665396|gb|EDS09526.1| hypothetical protein ANACOL_03670 [Anaerotruncus colihominis DSM
17241]
Length = 306
Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats.
Identities = 110/311 (35%), Positives = 166/311 (53%), Gaps = 8/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT EFAV L L+S H++ V+TQP +P G RG K + V A E L
Sbjct: 1 MRIVFMGTPEFAVPCLSRLISDGHAVAGVFTQPDKPQG-RGYKLMPPPVKVCALENGLSV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ + L + ++ VVVAYG ++P IL LG N H SLLP++RGAAP
Sbjct: 60 YQPAKMRDGQALALLKELSPELIVVVAYGKILPPDILELPPLGCVNVHGSLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ +++ GD G+ M M + LDTG + R+ P+ + + L L+ L A A+ E
Sbjct: 120 IQWSVLNGDRTAGVTTMYMAEGLDTGDMILKRETPLGPDETSGELYGRLAGLGAQALSET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + P PQ T+A ++K R+++ + A VHN IR ++P+P A +
Sbjct: 180 VRLIGEGCAPRVPQDGALATHAPMLTKELARIDWTKPAAEVHNLIRGMNPWPVAHTSLDG 239
Query: 242 GNKHERIKLLESQLV-EGEGKPGEVIN-PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+K+ S+L +G G PG + F +AC QGAV ++ +Q AG + + D+L
Sbjct: 240 RP----LKVYRSRLAPDGTGAPGTLAKSGGFVVACGQGAVELLEIQEAGKKRMAAADYLR 295
Query: 300 GCPVIIGCIVG 310
G P G +G
Sbjct: 296 GHPDAAGKTLG 306
>gi|89092290|ref|ZP_01165244.1| Putative Methionyl-tRNA formyltransferase [Oceanospirillum sp.
MED92]
gi|89083378|gb|EAR62596.1| Putative Methionyl-tRNA formyltransferase [Oceanospirillum sp.
MED92]
Length = 314
Score = 189 bits (479), Expect = 6e-46, Method: Composition-based stats.
Identities = 109/315 (34%), Positives = 177/315 (56%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT +FA +L+AL+++ H +++VYTQP + G+R + V A E ++P
Sbjct: 5 PLRIIFAGTPDFAAESLRALLNTEHEVIAVYTQPDKK-GKRKNQMAPRPVKDLAVENNIP 63
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++E + AD+ VVVAYG+++P+ IL+ +LG N H S+LPRWRGAA
Sbjct: 64 VFQPHSLKDEDEQLALTNLKADIMVVVAYGMLLPKAILDTPRLGCINVHGSILPRWRGAA 123
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P++R+++ GD ETG+ IM+MD+ LDTG + PIS A L + L+V+ + A+VE
Sbjct: 124 PVERSMLEGDQETGVTIMQMDEGLDTGDMLHKVFTPISQADTAASLFERLAVIGSEALVE 183
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L+ Q ++ TYA K+ K E ++N+ A + IR LSP ++
Sbjct: 184 TLTQLQNGTAQPEKQDDSLATYAAKLRKEEGQINWQEPASRIDLQIRTLSPRVAVTFKLG 243
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +KLL + V+ G+PGE++ + +AC +GA++I +LQ G + +D
Sbjct: 244 D----EAVKLLSCEPVDQSGQPGEILPSDKKSIVVACGEGAIKITQLQLPGKKAMDAAAV 299
Query: 298 LLGCP--VIIGCIVG 310
L G +G
Sbjct: 300 LNSKREQFSPGVSLG 314
>gi|253991651|ref|YP_003043007.1| methionyl-tRNA formyltransferase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253783101|emb|CAQ86266.1| methionyl-tRNA formyltransferase [Photorhabdus asymbiotica]
Length = 316
Score = 189 bits (479), Expect = 6e-46, Method: Composition-based stats.
Identities = 114/316 (36%), Positives = 178/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L+ L++S H +V V TQP RPAG RG K S V A+E ++
Sbjct: 4 SLRIVFAGTPDFAARHLETLLTSQHEVVGVLTQPDRPAG-RGKKLTPSTVKVLAEEHNIT 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E + L DV +VVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPATLRSEENQQWILKQQPDVIIVVAYGLILPKAVLDIPRLGCLNVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI+ +A L ++L+ + +A+++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDIGLDTGDMLYKASCPIAPEDTSASLYEKLANIGPNALLK 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q E +TYAEK+SK E R+N+ SA ++ IRA +P+P ++ E+
Sbjct: 183 TLSLIASGKSQPETQNEKLVTYAEKLSKEEARINWKLSAAHLERCIRAFNPWPMSFFEIE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++E +PG V+ IA + G + I +LQ AG + +
Sbjct: 243 G----QPVKIWKADVIEKQTSAEPGTVLQADKKGIHIATANGILNITQLQPAGKKAMSAE 298
Query: 296 DFLLGCP--VIIGCIV 309
+ L G +
Sbjct: 299 NLLNSKREWFTPGIKL 314
>gi|153941333|ref|YP_001391805.1| methionyl-tRNA formyltransferase [Clostridium botulinum F str.
Langeland]
gi|152937229|gb|ABS42727.1| methionyl-tRNA formyltransferase [Clostridium botulinum F str.
Langeland]
gi|295319830|gb|ADG00208.1| methionyl-tRNA formyltransferase [Clostridium botulinum F str.
230613]
Length = 313
Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats.
Identities = 90/318 (28%), Positives = 168/318 (52%), Gaps = 16/318 (5%)
Query: 3 LR---VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
++ +VFMGT +FAV +L+ L+ ++ +V+TQP RP G RG K +SAV + A + +
Sbjct: 1 MKDTTIVFMGTPDFAVPSLKKLIE-EFNVKAVFTQPDRPKG-RGKKLAMSAVKEVALQNN 58
Query: 60 LPALVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+ P K + ++ + D +VVA+G ++ + +L+ K G N HASLLP++R
Sbjct: 59 IEVYQPIKLKNDEICIKKLKEISPDFIIVVAFGQILSKEVLDIPKYGCINLHASLLPKYR 118
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI AI+ G+NE+G M MD+ LDTG + V I ++ L L +
Sbjct: 119 GAAPINWAIIKGENESGNTTMFMDEGLDTGDMLLKNTVKIEDDMTFGELHDILMESGSEL 178
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+V+ + L++ + Q I YA ++K ++++ ++++ ++ IR L+P P A+
Sbjct: 179 LVDTIKGLKEGTIEREKQKSENIIYASMLNKQMGKIDWNKTSKEINLLIRGLNPRPVAYT 238
Query: 238 EMMIGNKHERIKLLESQLVE--GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVL 292
+ +E +K+ S +++ PG ++ +A G + I +Q G + +
Sbjct: 239 QYK----NETMKIYNSSILKESSNKTPGTILKVSKEGIKVATGDGILSITTVQFPGKKPM 294
Query: 293 DIGDFLLGCPVIIGCIVG 310
+ +++ G + G ++G
Sbjct: 295 KVEEYIKGHTIEEGLVLG 312
>gi|303239361|ref|ZP_07325889.1| methionyl-tRNA formyltransferase [Acetivibrio cellulolyticus CD2]
gi|302593147|gb|EFL62867.1| methionyl-tRNA formyltransferase [Acetivibrio cellulolyticus CD2]
Length = 310
Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats.
Identities = 105/315 (33%), Positives = 170/315 (53%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT EFAV +L L+ + +V+V TQP +P G RG K L V + A E +
Sbjct: 1 MKIIFMGTPEFAVPSLDMLLKEGYDVVAVVTQPDKPKG-RGNKMALPPVKEYALEHGIDV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K+ EE+ + N D+ V AYG ++P+ +L+ K G N H SLLP++RGAAP
Sbjct: 60 LQPEKVKTEEFTNIIKDINPDLLVTAAYGKILPKSVLDIPKYGCINVHGSLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ +++ G+ TGI M D +DTG + ++ I+ + L LS+L A + E
Sbjct: 120 IQWSVINGEKVTGITTMFTDVGMDTGDMLLKGEIEITEGMTAGELHDRLSILGAEVLKET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L++ L +PQ + TYA ++K V++ RS++ +HN IR +P+PGA+
Sbjct: 180 LVRLKEGTLERAPQSDAEATYASMMTKDTGLVDWTRSSKEIHNLIRGTNPWPGAYTYYNG 239
Query: 242 GNKHERIKLLESQLVEGE------GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
G ++K+ + +V + G EV IAC G + I +Q R + +
Sbjct: 240 G----KMKIWITSVVSEDKHDLRAGTICEVGKNGIVIACGTGKLNIKEVQFESCRKMCVE 295
Query: 296 DFLLGCPVIIGCIVG 310
D++ G + G I+G
Sbjct: 296 DYICGHKMDEGEILG 310
>gi|269797909|ref|YP_003311809.1| methionyl-tRNA formyltransferase [Veillonella parvula DSM 2008]
gi|269094538|gb|ACZ24529.1| methionyl-tRNA formyltransferase [Veillonella parvula DSM 2008]
Length = 336
Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats.
Identities = 97/332 (29%), Positives = 164/332 (49%), Gaps = 29/332 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT +F+V TL+AL+ + HSIV VY QP + G RG + + V A E LP
Sbjct: 7 LRIVFMGTPDFSVPTLEALIQAGHSIVGVYCQPDKQKG-RGKQVQMPPVKVAALEHDLPV 65
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ + + DV +V+AYG ++P ++ + G N HAS+LP +RGAAP
Sbjct: 66 YQPVTLRDEQVRAELEALQPDVVIVIAYGKILPPWLIRLPQYGCINVHASILPSYRGAAP 125
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD++TG+ IM MD LDTG + + + I T L + ++VL +V
Sbjct: 126 IHYAILNGDSKTGVTIMHMDDGLDTGDIIDIVETDILPGETTGQLFERIAVLGGETIVPV 185
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + +PQ + T+ KI+K ++++ + A + N IR L+P PG + +
Sbjct: 186 LTRWVNGEIVATPQDDTMATHTTKITKEMGQIDWSKPANEIANLIRGLNPAPGCYTYL-- 243
Query: 242 GNKHERIKLLESQLVEGEGK--------------------PGEVINP--NFTIACSQG-A 278
+R+K+ ++V + PG +++ + C G
Sbjct: 244 --DGKRLKVWSGEVVPSDTTHCLIDVHGKHVPIAISATTVPGTIVSKIAGLGVFCGDGNI 301
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ + +Q + + DF+ G + G + G
Sbjct: 302 ILLTEVQPENKKRISAIDFINGHQIKEGIVFG 333
>gi|255657699|ref|ZP_05403108.1| methionyl-tRNA formyltransferase [Mitsuokella multacida DSM 20544]
gi|260849887|gb|EEX69894.1| methionyl-tRNA formyltransferase [Mitsuokella multacida DSM 20544]
Length = 312
Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats.
Identities = 94/310 (30%), Positives = 146/310 (47%), Gaps = 11/310 (3%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M RV+FMGT EFAV L AL ++ V TQP +P G RG K V S V A+
Sbjct: 1 MKKFRVIFMGTPEFAVPCLAALYEHC-DVIGVVTQPDKPRG-RGQKLVPSPVKAWAEAHG 58
Query: 60 LPALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP P K+ +E + F D+ VVVA+G ++ QRIL+ G N H SLLPR+RG
Sbjct: 59 LPVWQPKKIKEEAFTAFLEEQKPDLMVVVAFGQILSQRILDIPPYGCINVHGSLLPRYRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+Q ++ G+ +TG+ M MD LDTG + + PI + + L L A +
Sbjct: 119 AAPMQWCVIDGEKKTGVTTMFMDAGLDTGDMLLKAEFPIGPDTTLEEVHDGLMELGAKVL 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+E ++ L L PQ + +++ A+ +H+ +R L +PGA+
Sbjct: 179 IETLEALSAGTLKRIPQTGESNYAPMLTKETGH-IHWAEPAKKIHDLVRGLDSWPGAYTF 237
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ ++ + +PG ++ +A G + + LQ G + +
Sbjct: 238 LGGKKYKIWRTRCTAE--KTAEQPGTILRADKKEGLFVAAGDGVLEVTELQAPGKKRMAA 295
Query: 295 GDFLLGCPVI 304
D+L G +
Sbjct: 296 RDYLNGHAIA 305
>gi|20807949|ref|NP_623120.1| methionyl-tRNA formyltransferase [Thermoanaerobacter tengcongensis
MB4]
gi|23821557|sp|Q8R9T1|FMT_THETN RecName: Full=Methionyl-tRNA formyltransferase
gi|20516519|gb|AAM24724.1| Methionyl-tRNA formyltransferase [Thermoanaerobacter tengcongensis
MB4]
Length = 309
Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats.
Identities = 107/313 (34%), Positives = 168/313 (53%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT EFAV +L+ L + +++V TQP + G RG+K S V + A + +
Sbjct: 1 MRIVFMGTPEFAVPSLKRLFEEGYDVLAVVTQPDKQRG-RGMKVSFSPVKELALQKGVKV 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + N +V VV AYG ++P+ IL + G N HASLLP++RGAA
Sbjct: 60 LQPESVKNNPEFLQELKELNPEVIVVAAYGKILPEEILTLPEYGCINVHASLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ ETGI M MDK LDTG + R + I + + L +L+ L A + E
Sbjct: 120 PINWAIINGEKETGITTMLMDKGLDTGDMLLKRSIAIEEDDDAQTLHDKLANLGAEVLSE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ KL++ L Q + TYA I+K +++ A + N IR L P+PG +
Sbjct: 180 TLKKLKEGKLIPEKQKDEEATYAPIITKEMGHIDWKSPACRIRNLIRGLKPWPGCYTFY- 238
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ ++++VE G PG V+ + C + A+RI+ +Q+ G R + I +
Sbjct: 239 ---DGKMLKIWKAEVVEHFGNEPPGSVLKSKDELIVKCGENALRILEIQQEGSRKMGIRE 295
Query: 297 FLLGCPVIIGCIV 309
+L+G + G I+
Sbjct: 296 YLIGHNIPEGTIL 308
>gi|229174532|ref|ZP_04302064.1| Methionyl-tRNA formyltransferase [Bacillus cereus MM3]
gi|228609092|gb|EEK66382.1| Methionyl-tRNA formyltransferase [Bacillus cereus MM3]
Length = 314
Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats.
Identities = 105/313 (33%), Positives = 163/313 (52%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + ++ V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYEQ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLRIREKDEYEQVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E + + +PG ++ F +A V+I LQ +G + + F
Sbjct: 240 -GQVIKVWWGEKVSITEKAEPGTIVALEEDGFVVATGNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|162147912|ref|YP_001602373.1| methionyl-tRNA formyltransferase [Gluconacetobacter diazotrophicus
PAl 5]
gi|189044513|sp|A9HKQ4|FMT_GLUDA RecName: Full=Methionyl-tRNA formyltransferase
gi|161786489|emb|CAP56071.1| Methionyl-tRNA formyltransferase [Gluconacetobacter diazotrophicus
PAl 5]
Length = 305
Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats.
Identities = 116/312 (37%), Positives = 176/312 (56%), Gaps = 12/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ FMGT +FAV L AL + H I VY+QPPRPAG RG VH A+ +P
Sbjct: 1 MRLAFMGTPDFAVPALHALHEAGHEIAVVYSQPPRPAG-RGQAVRPQPVHLAAEALGIPV 59
Query: 63 LVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
VPT+L + F + + D AVV AYGL++P +L N HASLLPRWRGAA
Sbjct: 60 RVPTRLRANHDEHAFFRALDLDAAVVAAYGLILPGAMLTPRAGARLNVHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI+AGD+E+G+ IM+MD+ LDTG + +V ++ + L +L A
Sbjct: 120 PIQAAILAGDDESGVTIMQMDEGLDTGAMLLTGRVALTPATTASTLHDDL---AAMGGRL 176
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L + PQ G TYA ++++ + R+++ R A ++ +RAL+P+PG + +
Sbjct: 177 IVAALANSETAAIPQPAEGATYAARLTREDGRIDWTRDAVDIDRQVRALTPWPGTFTTLD 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+K+ + ++G + PG V++ T+AC QG +R+ R+QR G +++ FL
Sbjct: 237 GT----VLKIGAATPIDGPRDAVPGTVLDDRLTVACGQGTLRLTRIQRPGRGMMEADAFL 292
Query: 299 LGCPVIIGCIVG 310
G PV +G +G
Sbjct: 293 RGQPVPVGTRLG 304
>gi|170719273|ref|YP_001746961.1| methionyl-tRNA formyltransferase [Pseudomonas putida W619]
gi|229487508|sp|B1J432|FMT_PSEPW RecName: Full=Methionyl-tRNA formyltransferase
gi|169757276|gb|ACA70592.1| methionyl-tRNA formyltransferase [Pseudomonas putida W619]
Length = 310
Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats.
Identities = 122/314 (38%), Positives = 177/314 (56%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L+AL+ S + IV+VYTQP RPAG RG K + SAV A +P
Sbjct: 1 MRIVFAGTPEFAAEHLKALLDSPYEIVAVYTQPDRPAG-RGQKLMPSAVKALAVAHDIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAAP
Sbjct: 60 FQPPTLRNEDAQAELAALKPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+ AGD E+G+ +M+M+ LDTGP+ PIS++ L L+ + A+V+A
Sbjct: 120 IQRAVEAGDAESGVTVMRMEAGLDTGPMLLKVVTPISADDTGGSLHDRLAAMGPAAVVQA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L +L Q + TYA K++K E R+++ R A + IRA +P+P +
Sbjct: 180 IAGLADGSLQGEVQDDALATYAHKLNKDEARIDWSRPAVELERLIRAFNPWPVCHSTL-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
E +K+L ++L GEG PGE++ +AC A+ + RLQ GG+ L D
Sbjct: 238 --DGESVKVLAAKLSTGEGAPGEILSASKDGLVVACGDQALSLTRLQLPGGKALAFTDLF 295
Query: 299 LGCP--VIIGCIVG 310
G ++G
Sbjct: 296 NSRREKFATGKVLG 309
>gi|326402653|ref|YP_004282734.1| methionyl-tRNA formyltransferase [Acidiphilium multivorum AIU301]
gi|325049514|dbj|BAJ79852.1| methionyl-tRNA formyltransferase [Acidiphilium multivorum AIU301]
Length = 301
Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats.
Identities = 124/310 (40%), Positives = 176/310 (56%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ FMG+ FAV L+AL ++ H IV+VY QPPRP G RG + VH+ A+ L
Sbjct: 1 MRLAFMGSPGFAVPALRALHAAGHDIVAVYCQPPRPVG-RGHRIHKCPVHEAAEALGLTV 59
Query: 63 LVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +L +++ F + + D AVV AYG ++P +L A + G N HASLLPRWRGAA
Sbjct: 60 RTPERLRRDDAERAYFRALDLDAAVVAAYGQILPADMLVAPRRGCINIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+AGD +TG+ IM+MD+ LDTG VPI T L L+ L A +++
Sbjct: 120 PIHAAILAGDAQTGVTIMQMDEGLDTGATLLAEAVPIGPEDTTVDLLDRLADLGAALVIK 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D N P PQ E G+TYA K+SK + +++ SA + IRA P+PG +
Sbjct: 180 VLDG----NFPPVPQPEAGVTYAPKLSKADAEIDWSASAAVILRRIRAFWPWPGTETRL- 234
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
E +K++ ++ G+G+PG V++ IAC A+R +QRAG + FL G
Sbjct: 235 ---DGEALKIIRAEPAAGQGEPGTVLDDRLAIACGDAAIRPTLVQRAGRAAMPAEAFLRG 291
Query: 301 CPVIIGCIVG 310
PV IG +G
Sbjct: 292 HPVAIGTRLG 301
>gi|37528513|ref|NP_931858.1| methionyl-tRNA formyltransferase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|39931201|sp|Q7MYI1|FMT_PHOLL RecName: Full=Methionyl-tRNA formyltransferase
gi|36787951|emb|CAE17068.1| methionyl-tRNA formyltransferase [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 315
Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L+AL+ S H +V V T+P +PAG RG K S V A+E ++
Sbjct: 4 SLRIVFAGTPDFAARHLEALLMSQHEVVGVLTRPDKPAG-RGKKLTPSPVKVLAEERNIT 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E + L DV +VVAYGL++P+ +LN +LG N H SLLPRWRGAA
Sbjct: 63 VFQPATLRSEENQQWVLKQQPDVLIVVAYGLILPKVVLNIPELGCLNVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + + PI+ +A L ++L+ + A+++
Sbjct: 123 PIQRSLWAGDTETGVTIMQMDIGLDTGDMLYKARCPITPEDTSASLYEKLANIGPDALLK 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q EN +TYAEK+SK E R+N+ SA ++ IRA +P+P ++ EM
Sbjct: 183 TLSLITSGKSQPETQNENLVTYAEKLSKEEARINWELSATHLERCIRAFNPWPMSFFEME 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +++ +E +PG V+ IA + G + I +LQ AG + +
Sbjct: 243 G----QPIKVWKAEAIEEQTSVEPGTVLKADKEGIYIATADGILNITQLQPAGKKAMSAA 298
Query: 296 DFLLGCP--VIIGCIV 309
+ L G +
Sbjct: 299 NLLNSKREWFTPGNKI 314
>gi|50122920|ref|YP_052087.1| methionyl-tRNA formyltransferase [Pectobacterium atrosepticum
SCRI1043]
gi|73919392|sp|Q6D001|FMT_ERWCT RecName: Full=Methionyl-tRNA formyltransferase
gi|49613446|emb|CAG76897.1| methionyl-tRNA formyltransferase [Pectobacterium atrosepticum
SCRI1043]
Length = 315
Score = 188 bits (478), Expect = 8e-46, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 177/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L L+SS H +V V+TQP RPAG RG K S V A++ S+P
Sbjct: 4 SLRIIFAGTPDFAARHLDVLLSSGHEVVGVFTQPDRPAG-RGNKLTPSPVKVLAEQHSIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E + +ADV VVVAYGL++PQ +L+ +LG N H SLLP WRGAA
Sbjct: 63 VFQPKSLRPAENQAMVEALDADVMVVVAYGLILPQPVLSMPRLGCINVHGSLLPLWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD+ETG+ IM+MD LDTG + PI +A L +L+ L ++E
Sbjct: 123 PIQRALWAGDSETGVTIMQMDVGLDTGAMLHKIACPILPQDTSATLYDKLAALGPRGLLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+++L ++ Q + TYAEK+SK E R+N+ SAE + IRA +P+P ++ +
Sbjct: 183 TLERLADSSAVAEAQNDAFATYAEKLSKEEARLNWLLSAEQLERCIRAFNPWPVSYFIV- 241
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ +++++ +PG ++ +A + G + I LQ AG +V+
Sbjct: 242 ---DEQPVKVWKAEVIAKSHGSQPGTILQADKQGIQVAAADGILNIQELQPAGKKVMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNTL 314
>gi|225028094|ref|ZP_03717286.1| hypothetical protein EUBHAL_02364 [Eubacterium hallii DSM 3353]
gi|224954564|gb|EEG35773.1| hypothetical protein EUBHAL_02364 [Eubacterium hallii DSM 3353]
Length = 311
Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats.
Identities = 109/314 (34%), Positives = 177/314 (56%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT +FAV TL AL+ + H +V V TQP + G RG + V +KA E+ +P
Sbjct: 1 MRVVFMGTPDFAVPTLAALIEN-HEVVGVVTQPDKRKG-RGKAMAFTPVKEKALEYDIPV 58
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+G+EE+ + L N +V VV A+G ++P+ ILN K G N HASLLP++RGAAP
Sbjct: 59 YQPVKVGEEEFIEILRGLNPEVIVVAAFGQILPESILNMPKYGCINVHASLLPKYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ +I+ G+ ETG+ IM M+K LDTG + VPI + L +L+ ++E
Sbjct: 119 IQWSIIDGEKETGVTIMYMEKGLDTGDMIDKVVVPIDTKETGESLHDKLAAAGGPLLLEV 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+DKLE + Q + YA+ ++K ++++ + A ++ IR L+ +P A+
Sbjct: 179 LDKLEAGTAVRTRQNDEESCYAKMLTKDLGKIDWNKDAASIERLIRGLNSWPSAYTAF-- 236
Query: 242 GNKHERIKLLESQLVEGEG--KPG---EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ ++ + + G +PG +V + + +G ++I +Q G + + +
Sbjct: 237 --HDKTLKIWDADVEKENGSAQPGAVAKVTSDAIYVQTGEGLLKINEVQIQGKKRMPVKA 294
Query: 297 FLLGCPVIIGCIVG 310
FLLG V G ++G
Sbjct: 295 FLLGHKVEEGTLLG 308
>gi|237795948|ref|YP_002863500.1| methionyl-tRNA formyltransferase [Clostridium botulinum Ba4 str.
657]
gi|229262043|gb|ACQ53076.1| methionyl-tRNA formyltransferase [Clostridium botulinum Ba4 str.
657]
Length = 313
Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats.
Identities = 89/318 (27%), Positives = 167/318 (52%), Gaps = 16/318 (5%)
Query: 3 LR---VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
++ +VFMGT +FAV +L+ ++ ++ +V+TQP RP G RG K +SAV + A + +
Sbjct: 1 MKDTTIVFMGTPDFAVPSLKKIIE-KFNVKAVFTQPDRPKG-RGKKLAMSAVKEVALQNN 58
Query: 60 LPALVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+ P K + ++ N D +VVA+G ++ + +L+ K G N HASLLP++R
Sbjct: 59 IEVYQPIKLKNDEICIKKLKEINPDFIIVVAFGQILSKEVLDIPKYGCINLHASLLPKYR 118
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI AI+ G+ E+G M MD+ LDTG + V I ++ L L +
Sbjct: 119 GAAPINWAIIKGEKESGNTTMFMDEGLDTGDMLLKNTVKIEDDMTFGELHDILMETGSEL 178
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+V+ + L++ + Q I YA ++K ++++ ++++ ++ IR L+P P A+
Sbjct: 179 LVDTIKGLKEGTIKREKQKSENIIYASMLNKQMGKIDWNKTSKEINLLIRGLNPRPVAYT 238
Query: 238 EMMIGNKHERIKLLESQLVE--GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVL 292
+ +E +K+ S +++ PG ++ +A G + I +Q G + +
Sbjct: 239 QYK----NETMKIYNSSILKESSNKTPGTILKVSKGGIKVATGDGILSITTVQFPGKKPM 294
Query: 293 DIGDFLLGCPVIIGCIVG 310
+ +++ G + G ++G
Sbjct: 295 KVEEYIKGHTIEEGLVLG 312
>gi|332163228|ref|YP_004299805.1| methionyl-tRNA formyltransferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325667458|gb|ADZ44102.1| methionyl-tRNA formyltransferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330861819|emb|CBX71991.1| methionyl-tRNA formyltransferase [Yersinia enterocolitica W22703]
Length = 315
Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats.
Identities = 114/316 (36%), Positives = 173/316 (54%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K S V A++ +P
Sbjct: 4 SLRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAG-RGNKLTSSPVKVLAEQHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE + ++ D+ VVVAYGL++P +L +LG N H SLLPRWRGAA
Sbjct: 63 IFQPKSLRPEENQYLVADLNADIMVVVAYGLILPASVLAMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD +TG+ IM+MD LDTG + + I +A L +L+ L ++
Sbjct: 123 PIQRSLWAGDAKTGVTIMQMDVGLDTGDMLHKIECDIQPEDTSATLYDKLAQLGPQGLLV 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + + Q E +TYAEK+SK E ++++ SA + IRA +P+P ++ +
Sbjct: 183 TLQQLAEGSAQPEVQDEAQVTYAEKLSKEEAKLDWSLSAVQLERCIRAFNPWPVSYFVV- 241
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ ++Q++ PG +I +A + G + I +LQ AG + +
Sbjct: 242 ---DEQPIKVWQAQVLATVDNAAPGTIIHADKHGIQVATADGVLNITQLQPAGKKAMSAA 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 299 DLLNSRREWFTPGNQL 314
>gi|226949862|ref|YP_002804953.1| methionyl-tRNA formyltransferase [Clostridium botulinum A2 str.
Kyoto]
gi|226843844|gb|ACO86510.1| methionyl-tRNA formyltransferase [Clostridium botulinum A2 str.
Kyoto]
Length = 313
Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats.
Identities = 90/318 (28%), Positives = 168/318 (52%), Gaps = 16/318 (5%)
Query: 3 LR---VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
++ +VFMGT +FAV +L+ L+ ++ +V+TQP RP G RG K +SAV + A + +
Sbjct: 1 MKDTTIVFMGTPDFAVPSLKKLIE-EFNVKAVFTQPDRPKG-RGKKLAMSAVKEVALQNN 58
Query: 60 LPALVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+ P K + ++ + D +VVA+G ++ + +L+ K G N HASLLP++R
Sbjct: 59 IEVYQPIKLKNDEICIKKLKEISPDFIIVVAFGQILSKEVLDIPKYGCINLHASLLPKYR 118
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI AI+ G+NE+G M MD+ LDTG + V I ++ L L +
Sbjct: 119 GAAPINWAIIKGENESGNTTMFMDEGLDTGDMLLKNTVKIEDDMTFGELHDILMESGSEL 178
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+V+ + L++ + Q I YA ++K ++++ ++++ ++ IR L+P P A+
Sbjct: 179 LVDTIKGLKEGTIEREKQKSENIIYASMLNKQIGKIDWNKTSKEINLLIRGLNPRPVAYT 238
Query: 238 EMMIGNKHERIKLLESQLVE--GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVL 292
+ +E +K+ S +++ PG ++ +A G + I +Q G + +
Sbjct: 239 QYK----NETMKIYNSSILKESSNKTPGTILKVSKEGIKVATGDGILSITTVQFPGKKPM 294
Query: 293 DIGDFLLGCPVIIGCIVG 310
+ +++ G + G ++G
Sbjct: 295 KVEEYIKGHTIEEGLVLG 312
>gi|229031496|ref|ZP_04187496.1| Methionyl-tRNA formyltransferase [Bacillus cereus AH1271]
gi|228729785|gb|EEL80765.1| Methionyl-tRNA formyltransferase [Bacillus cereus AH1271]
Length = 314
Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats.
Identities = 105/313 (33%), Positives = 162/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + ++ V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + EYEQ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLRIREKAEYEQVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E + + +PG ++ F +A V+I LQ +G + + F
Sbjct: 240 -GQVIKVWWGEKVSITEKAEPGTIVALEEDGFVVATGNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|253690151|ref|YP_003019341.1| methionyl-tRNA formyltransferase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259646044|sp|C6DFR6|FMT_PECCP RecName: Full=Methionyl-tRNA formyltransferase
gi|251756729|gb|ACT14805.1| methionyl-tRNA formyltransferase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 315
Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 175/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H +V V+TQP RPAG RG K S V A++ ++P
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHEVVGVFTQPDRPAG-RGNKLTPSPVKVLAEQHNIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E + +ADV VVVAYGL++PQ +L+ +LG N H SLLP WRGAA
Sbjct: 63 IFQPKSLRPAENQAMVQALDADVMVVVAYGLILPQPVLSMPRLGCINVHGSLLPLWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD+ETG+ IM+MD LDTG + PI +A L +L+ L ++E
Sbjct: 123 PIQRALWAGDSETGVTIMQMDVGLDTGAMLHKISCPILPQDTSATLYDKLAELGPRGLLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L + Q + TYAEK+SK E R+N+ SAE + IRA +P+P ++ +
Sbjct: 183 TLELLADGSAVAEAQNDALATYAEKLSKEEARLNWQLSAEQLERCIRAFNPWPVSYFTV- 241
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ +++++ PG ++ +A + G + I LQ AG +V+
Sbjct: 242 ---DEQPVKVWKAEVITTAHSTLPGTILQADKQGIQVATAVGILNIQELQPAGKKVMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNTL 314
>gi|149913452|ref|ZP_01901985.1| methionyl-tRNA formyltransferase [Roseobacter sp. AzwK-3b]
gi|149812572|gb|EDM72401.1| methionyl-tRNA formyltransferase [Roseobacter sp. AzwK-3b]
Length = 305
Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats.
Identities = 153/312 (49%), Positives = 198/312 (63%), Gaps = 12/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT +F+V L+ALV++ H + +VY QPPRPAG RG K + V +A+E L
Sbjct: 1 MRLIFMGTPDFSVPVLEALVAAGHEVAAVYCQPPRPAG-RGKKDRPTPVQARAEEMGLEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G +E F + ADVAVVVAYGL++PQ IL+A K G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKGADEQADFAALGADVAVVVAYGLILPQAILDAPKRGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD TG+ IM+M+ LDTGPV R+ I T L LS + A A++EA
Sbjct: 120 IHRAIMAGDARTGVCIMQMEAGLDTGPVLLRRETEIGQTETTGALHDRLSRMGAEAIIEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L+ +L PQ + G+TYA KI K E RV++ R V IR LSPFPGAW E
Sbjct: 180 LARLD--DLTPEPQPDEGVTYAAKIDKAEARVDWSRPCRQVDRLIRGLSPFPGAWCE--- 234
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ ERIKLL S+L EG G PGEV+ +AC +GAVR++RLQRAG D F
Sbjct: 235 -HRGERIKLLASELAEGAGCPGEVLEAAGGGALRVACGEGAVRLLRLQRAGRGAQDAETF 293
Query: 298 LLGCPVIIGCIV 309
L G P++ G ++
Sbjct: 294 LRGLPLVPGDML 305
>gi|52080176|ref|YP_078967.1| methionyl-tRNA formyltransferase Fmt [Bacillus licheniformis ATCC
14580]
gi|52785553|ref|YP_091382.1| hypothetical protein BLi01794 [Bacillus licheniformis ATCC 14580]
gi|319646044|ref|ZP_08000274.1| methionyl-tRNA formyltransferase [Bacillus sp. BT1B_CT2]
gi|73919376|sp|Q65JS5|FMT_BACLD RecName: Full=Methionyl-tRNA formyltransferase
gi|52003387|gb|AAU23329.1| methionyl-tRNA formyltransferase Fmt [Bacillus licheniformis ATCC
14580]
gi|52348055|gb|AAU40689.1| Fmt [Bacillus licheniformis ATCC 14580]
gi|317391794|gb|EFV72591.1| methionyl-tRNA formyltransferase [Bacillus sp. BT1B_CT2]
Length = 316
Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 164/317 (51%), Gaps = 13/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT R+VFMGT +F+V L L+ + +V V TQP RP G R V ++A +
Sbjct: 1 MT-RIVFMGTPDFSVPVLGTLIDDGYEVVGVVTQPDRPKG-RKKVMTPPPVKEEALRRGI 58
Query: 61 PALVPTKLGQE-EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P K+ +E E ++ L+ D+ V A+G ++P+++L+ K G N HASLLP RG
Sbjct: 59 PVLQPEKVREEAETDKILALEPDLIVTAAFGQILPKKLLDYPKYGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G +TG+ IM M + LD G + +V I N L +LS A +
Sbjct: 119 APIHYAILEGKEKTGVTIMYMVEKLDAGDMLAKVEVDIEETDNVGTLHDKLSKAGAALLS 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + ++ ++ Q E TYA I + + +++ + E ++N +R L+P+P A+ +
Sbjct: 179 ETVPRIIDGSVTPEKQDEQKATYAPNIKREQELIDWSKPGEVLYNQVRGLNPWPVAYTVL 238
Query: 240 MIGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLD 293
+ +K+ ++ + + +PGE++ +A A+++ +Q AG + +
Sbjct: 239 ----NGQTLKVWAAKKCQALKQAEPGEIVTVEKDGIVVATGNDTALKLTEVQPAGKKRMK 294
Query: 294 IGDFLLGCPVIIGCIVG 310
DF+ G + G +G
Sbjct: 295 AEDFVRGAGLQAGMKLG 311
>gi|229162802|ref|ZP_04290759.1| Methionyl-tRNA formyltransferase [Bacillus cereus R309803]
gi|228620684|gb|EEK77553.1| Methionyl-tRNA formyltransferase [Bacillus cereus R309803]
Length = 314
Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats.
Identities = 105/313 (33%), Positives = 162/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + +V V TQP RP G R + V +A++ +P
Sbjct: 2 MKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ D+ V A+G ++P IL + K G N HASLLP RG AP
Sbjct: 61 LQPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILESPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIDERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E V + G ++ F +A S V+I LQ +G + + F
Sbjct: 240 -GQVVKVWWGEKVPVTEVAEAGTIVAIEEDGFVVATSNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|147678125|ref|YP_001212340.1| methionyl-tRNA formyltransferase [Pelotomaculum thermopropionicum
SI]
gi|189044570|sp|A5D1B9|FMT_PELTS RecName: Full=Methionyl-tRNA formyltransferase
gi|146274222|dbj|BAF59971.1| methionyl-tRNA formyltransferase [Pelotomaculum thermopropionicum
SI]
Length = 313
Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats.
Identities = 109/315 (34%), Positives = 168/315 (53%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT +FAV +L+ALV + H +++V TQP RP G RG K V + A ++P
Sbjct: 1 MRVVFMGTPDFAVPSLKALVEAGHDVLAVVTQPDRPRG-RGRKETPPPVKQAAHALNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYG-LVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ ++ L + + V +IP IL K G N HASLLP++RGAAP
Sbjct: 60 FQPLKIKDADFTALLKKLSPQVIAVVAYGRIIPPDILTIPKYGCINVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G+ ETGI M MD+ LDTG + V I+ + L+VL A +V+
Sbjct: 120 IHWAVINGEKETGITTMFMDEGLDTGDMILQEAVAITEEDTAGTVHDALAVLGARLLVQT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ + Q P PQ + +YA + + + + R+A ++ N IR ++P+PGA
Sbjct: 180 LELVGQGMAPRVPQ-QGIPSYAPPLKTEDELIRWDRTARDIFNQIRGMNPWPGARTYFSG 238
Query: 242 GNKHERIKLLESQLVEGEG---KPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ + +VE EG KPG+V++ + +G + + LQ G R L G
Sbjct: 239 ----KVLKIWRAAVVEEEGAALKPGQVMSAGRNAIVVGTGRGRIAVTELQLQGARRLSAG 294
Query: 296 DFLLGCPVIIGCIVG 310
DFL G P+ G ++G
Sbjct: 295 DFLRGTPMPEGIVLG 309
>gi|237756238|ref|ZP_04584799.1| methionyl-tRNA formyltransferase [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691596|gb|EEP60643.1| methionyl-tRNA formyltransferase [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 311
Score = 188 bits (477), Expect = 1e-45, Method: Composition-based stats.
Identities = 111/315 (35%), Positives = 178/315 (56%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT +FAV +L+AL+ S+H +V V TQP +P G RG K + V ++A ++++P
Sbjct: 1 MRVLFWGTPDFAVKSLKALIESNHQVVGVVTQPDKPRG-RGQKIQPTPVKEEALKYNIPV 59
Query: 63 LVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ + N D++VVVAYG ++P+ I+N K N HASLLP +RGAA
Sbjct: 60 FQPEKIKNNQEFLETVKKLNPDISVVVAYGKILPEEIINIPKYKTINVHASLLPEYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAIM G ++TG+ IM++ K LD G V R+V I+ + + L +L+ A ++E
Sbjct: 120 PIQRAIMEGKDKTGVCIMEIIKELDAGDVYACREVEITEDDDIISLHDKLAGEGARLLIE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+DK+E+ + PQ TYA+ I K E +++F RSA+ + N IRAL +P A+ +
Sbjct: 180 VLDKIEKGEIDKKPQNHEKATYAKPIEKSEGKIDFSRSAKEIFNQIRALKVWPKAYAKFR 239
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
E +K+L++++VE PGE+I + G + + +Q + +
Sbjct: 240 D----EEVKILDAKIVECNVNALPGEIIKADEKEGIVVKAGNGCLLLKLIQFPNSKPITT 295
Query: 295 GDFLLGCPVIIGCIV 309
D + G + +G
Sbjct: 296 QDAIRGYKIKVGERF 310
>gi|323493838|ref|ZP_08098956.1| methionyl-tRNA formyltransferase [Vibrio brasiliensis LMG 20546]
gi|323311972|gb|EGA65118.1| methionyl-tRNA formyltransferase [Vibrio brasiliensis LMG 20546]
Length = 315
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 177/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 PLKIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAG-RGKKLTASPVKNIALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDEAKQELADLNADLMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI + +A + ++L+ L A+VE
Sbjct: 123 PIQRSIWAGDKETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYEKLAELGPQALVE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K+SK E R+N+ A ++ +RA +P+P + E
Sbjct: 183 CLSDIANGTAVAEKQDDELANYAKKLSKEEARINWSDEATHIERCVRAFNPWPMSHFEAA 242
Query: 241 IGNKHERIKLLESQLVE-GEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S++ E KP G ++ +A G + + +LQ G + + +
Sbjct: 243 ENS----IKVWQSRVEEQTSAKPAGTILQADKSGIHVATGNGVLVLEQLQIPGKKAMPVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G ++
Sbjct: 299 DILNSRASWFEVGSVL 314
>gi|168180608|ref|ZP_02615272.1| methionyl-tRNA formyltransferase [Clostridium botulinum NCTC 2916]
gi|182668488|gb|EDT80467.1| methionyl-tRNA formyltransferase [Clostridium botulinum NCTC 2916]
Length = 313
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 91/318 (28%), Positives = 168/318 (52%), Gaps = 16/318 (5%)
Query: 3 LR---VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
++ +VFMGT +FAV +L+ L+ ++ +V+TQP RP G RG K +SAV + A + +
Sbjct: 1 MKDTTIVFMGTPDFAVPSLKKLIE-EFNVRAVFTQPDRPKG-RGKKLAMSAVKEVALQNN 58
Query: 60 LPALVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+ P K + ++ + D +VVA+G ++ + +LN K G N HASLLP++R
Sbjct: 59 IEVYQPIKLKNDEICIKKLKEISPDFIIVVAFGQILSKEVLNIPKYGCINLHASLLPKYR 118
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI AI+ G+NE+G M MD+ LDTG + V I ++ L L +
Sbjct: 119 GAAPINWAIIKGENESGNTTMFMDEGLDTGDMLLKNTVKIEDDMTFGELHDILMESGSEL 178
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+V+ + L++ + Q I YA ++K ++++ ++++ ++ IR L+P P A+
Sbjct: 179 LVDTIKGLKEGTIEREKQKSENIIYASMLNKQMGKIDWNKTSKEINLLIRGLNPRPVAYT 238
Query: 238 EMMIGNKHERIKLLESQLVE--GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVL 292
+ +E +K+ S +++ PG ++ +A G + I +Q G + +
Sbjct: 239 QYK----NETMKIYNSSILKESSNKTPGTILKVSKEGIKVATGDGILSITTVQFPGKKPM 294
Query: 293 DIGDFLLGCPVIIGCIVG 310
+ +++ G + G ++G
Sbjct: 295 KVEEYIKGHTIEEGLVLG 312
>gi|116053738|ref|YP_788173.1| methionyl-tRNA formyltransferase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|122262127|sp|Q02V63|FMT_PSEAB RecName: Full=Methionyl-tRNA formyltransferase
gi|115588959|gb|ABJ14974.1| methionyl-tRNA formyltransferase [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 314
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 128/318 (40%), Positives = 179/318 (56%), Gaps = 13/318 (4%)
Query: 1 MT--LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M+ LR+VF GT EFA L+AL+ + H IV+VYTQP RPAG RG K + SAV A E
Sbjct: 1 MSQALRIVFAGTPEFAAEHLKALLDTPHRIVAVYTQPDRPAG-RGQKLMPSAVKSLALEH 59
Query: 59 SLPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP + P E + + AD+ VVVAYGL++PQ +L+ +LG N HASLLPRWR
Sbjct: 60 GLPVMQPQSLRNAEAQAELAALRADLMVVVAYGLILPQAVLDIPRLGCINSHASLLPRWR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPIQRA+ AGD E+G+ +M+M+ LDTGP+ PIS+ L L+ L A
Sbjct: 120 GAAPIQRAVEAGDAESGVTVMQMEAGLDTGPMLLKVSTPISAADTGGSLHDRLAALGPKA 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+VEA+ L L Q + TYA K++K E R+++ R A + +RA +P+P
Sbjct: 180 VVEAIAGLAAGTLHGEDQDDALATYAHKLNKDEARLDWSRPAVELERQVRAFTPWPVCHT 239
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +K+L + L +G G PG ++ +AC +GA+R+ RLQ GG+ L
Sbjct: 240 SLADAP----LKVLGASLGQGSGAPGTILEASRDGLLVACGEGALRLTRLQVPGGKPLAF 295
Query: 295 GDFLLGCP--VIIGCIVG 310
D G ++G
Sbjct: 296 ADLYNSRREQFATGQVLG 313
>gi|163743816|ref|ZP_02151189.1| methionyl-tRNA formyltransferase [Phaeobacter gallaeciensis 2.10]
gi|161382965|gb|EDQ07361.1| methionyl-tRNA formyltransferase [Phaeobacter gallaeciensis 2.10]
Length = 301
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 144/308 (46%), Positives = 192/308 (62%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +F+V L ALV + H I +VY QPPRPAG RG K + VH +A+
Sbjct: 1 MRIVFMGTPDFSVPVLDALVEAGHDIAAVYCQPPRPAG-RGKKDRPTPVHARAEALGFEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ +F + NADVAVVVAYGL++PQ +L+A + G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKDAQQQAEFAALNADVAVVVAYGLILPQAVLDAPRQGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD +TG+ IM+M+ LDTGPV I + TA L LS + A +V+A
Sbjct: 120 IHRAIMAGDAQTGVCIMQMEAGLDTGPVLMREATDIGAEETTAQLHDRLSEMGAELIVQA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + NL Q ++G+TYA KI K E RV++ R A V IR LSPFPGAW E+
Sbjct: 180 L--TQLTNLTPVVQPDDGVTYAHKIEKAEARVDWTRPAVEVDQQIRGLSPFPGAWCEI-- 235
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+R+KLL S++V+G G G V++ + IAC +GAV ++RLQRAG + FL G
Sbjct: 236 --DGQRVKLLASRVVDGAGVAGRVLDDSLRIACGEGAVELLRLQRAGKGAQEREIFLRGF 293
Query: 302 PVIIGCIV 309
P+ G +
Sbjct: 294 PIAAGTDL 301
>gi|188580853|ref|YP_001924298.1| methionyl-tRNA formyltransferase [Methylobacterium populi BJ001]
gi|179344351|gb|ACB79763.1| methionyl-tRNA formyltransferase [Methylobacterium populi BJ001]
Length = 309
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 138/309 (44%), Positives = 190/309 (61%), Gaps = 3/309 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV TL L + H IV+VYT+ P AG RG+ S VH +A+ LP
Sbjct: 1 MRIVFMGTPDFAVPTLDRLHADGHDIVAVYTRAPAKAG-RGMALKPSPVHARAEALGLPV 59
Query: 63 LVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P+ L EE + + ADVAVVVAYG+++PQ+IL+ + G N H SLLPRWRGAAP
Sbjct: 60 LTPSTLKSEEAFETFAGHGADVAVVVAYGMLLPQKILDVPRFGCLNLHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+MAGD E+G+ +M+M+ LDTGPVA ++ I+ + L L L A M A
Sbjct: 120 IQRAVMAGDAESGVGVMRMEAGLDTGPVAMEARLTITEGMTAGELHDRLMPLGADLMGRA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE+ L +PQ G+ YA KI+ E R+++ R AE V HI LSPFPGA+ E +
Sbjct: 180 IQALEREGLTFTPQATEGVVYAHKITNEEARIDWSRQAEEVARHINGLSPFPGAYFEADL 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVL-DIGDFLLG 300
G ER+K+L + +G G PG +++ T+AC GAVR++ L+RAG + +FL G
Sbjct: 240 GKGPERVKVLRALAHDGSGTPGTLLDAAGTVACGTGAVRLLELRRAGKGGVASGEEFLRG 299
Query: 301 CPVIIGCIV 309
+ G
Sbjct: 300 ARLAAGASF 308
>gi|238788879|ref|ZP_04632669.1| Methionyl-tRNA formyltransferase [Yersinia frederiksenii ATCC
33641]
gi|238722906|gb|EEQ14556.1| Methionyl-tRNA formyltransferase [Yersinia frederiksenii ATCC
33641]
Length = 320
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 113/316 (35%), Positives = 173/316 (54%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K S V A++ +P
Sbjct: 9 SLRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAG-RGNKLTPSPVKVLAEQQGIP 67
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE + ++ D+ VVVAYGL++P +L +LG N H SLLPRWRGAA
Sbjct: 68 VFQPKSLRPEENQHLVADLKADIMVVVAYGLILPASVLAMPRLGCINVHGSLLPRWRGAA 127
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD +TG+ IM+MD LDTG + + I +A L +L+ L ++
Sbjct: 128 PIQRSLWAGDAKTGVTIMQMDVGLDTGDMLHKIECDIQPQDTSATLYDKLAQLGPQGLLV 187
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + Q E +TYAEK+SK E ++++ SA + IRA +P+P ++ +
Sbjct: 188 TLQQLAEGRAQPEVQDEAQVTYAEKLSKEEAKLDWSLSAVQLERCIRAFNPWPVSYFVV- 246
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++Q++ PG +I +A ++G + I +LQ AG + +
Sbjct: 247 ---DEQPVKVWQAQVLAAVDNVAPGTIIHADKHGIQVATAKGVLNITQLQPAGKKAMSAA 303
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 304 DLLNSRREWFTPGSQL 319
>gi|261405799|ref|YP_003242040.1| methionyl-tRNA formyltransferase [Paenibacillus sp. Y412MC10]
gi|261282262|gb|ACX64233.1| methionyl-tRNA formyltransferase [Paenibacillus sp. Y412MC10]
Length = 313
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 89/313 (28%), Positives = 161/313 (51%), Gaps = 7/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT FAV +L+ L++ ++I +V TQP RP G R + V + A +P
Sbjct: 1 MNIVFMGTPAFAVPSLEMLIAEGYTIAAVVTQPDRPQG-RKKVLTPTPVKEAALRHGIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + E + + D+ V AYG ++P+ +L+ LG N H SLLP +RG AP
Sbjct: 60 LQPQRLRNPEAVAELAEYKPDLIVTAAYGQILPKSVLDMPALGCLNVHGSLLPAYRGGAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQR+I+ G+ TGI +M M + LDTG + +VPI + + ++LS A +
Sbjct: 120 IQRSIINGEPVTGITLMYMAEGLDTGDMIARTEVPIEDDDTAGTMFEKLSQAGAELLRRE 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM-- 239
+ +L + + PQ ++ TYA +++ + ++++ R++ +++ IR L P+ G +
Sbjct: 180 LPRLVKGRVEAEPQDDSKATYAPNLTRDDEKIDWSRTSREIYDQIRGLVPYSGGFTLWNG 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ K +Q G+ +PG V+ + G + ++ +Q +G + +D
Sbjct: 240 EVFKVWAAAKPDSAQKPSGDAQPGTVLELHETGIVVKTGDGTLTLLTVQPSGKKAMDAAQ 299
Query: 297 FLLGCPVIIGCIV 309
F+ G + G ++
Sbjct: 300 FVRGTSLTAGTVL 312
>gi|83941564|ref|ZP_00954026.1| methionyl-tRNA formyltransferase [Sulfitobacter sp. EE-36]
gi|83847384|gb|EAP85259.1| methionyl-tRNA formyltransferase [Sulfitobacter sp. EE-36]
Length = 304
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 146/308 (47%), Positives = 189/308 (61%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT +F+V L ALV + H I +VY QPPRPAG RG K S V ++A+ L
Sbjct: 1 MRVIFMGTPDFSVPVLDALVLAGHEIAAVYCQPPRPAG-RGKKDRPSPVQQRAEALGLLV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E +F + +ADVAVVVAYGL++PQ +L+A K G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKTAEAQAEFAALDADVAVVVAYGLILPQAVLDAPKSGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD ETG+ IM+M+ LDTGPV PI + T L LS + A +VEA
Sbjct: 120 IHRAIMAGDVETGVCIMQMEAGLDTGPVLLSAATPIRTTETTIELHDRLSTMGAELIVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ E +L PQ E G+TYA KI K E R+++ R A V IR LSPFPGAW ++
Sbjct: 180 L--RELPDLQPEPQPEEGVTYASKIDKTEARIDWSRPATEVDRQIRGLSPFPGAWFDLDG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
R+K+L S+L EG G GEV++ + C +GAV+++RLQRAG D F G
Sbjct: 238 T----RVKVLASKLAEGVGAAGEVLDDTLRVGCGEGAVQLIRLQRAGKAAQDAQTFQRGA 293
Query: 302 PVIIGCIV 309
+ G ++
Sbjct: 294 QIAAGTVL 301
>gi|318607710|emb|CBY29208.1| methionyl-tRNA formyltransferase [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 315
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 114/316 (36%), Positives = 173/316 (54%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K S V A++ +P
Sbjct: 4 SLRIIFAGTPDFAARHLGALLSSQHQIVGVFTQPDRPAG-RGNKLTSSPVKVLAEQHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE + ++ D+ VVVAYGL++P +L +LG N H SLLPRWRGAA
Sbjct: 63 IFQPKSLRPEENQYLVADLNADIMVVVAYGLILPASVLAMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD +TG+ IM+MD LDTG + + I +A L +L+ L ++
Sbjct: 123 PIQRSLWAGDAKTGVTIMQMDVGLDTGDMLHKIEYDIQPEDTSATLYDKLAQLGPQGLLV 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + + Q E +TYAEK+SK E ++++ SA + IRA +P+P ++ +
Sbjct: 183 TLQQLAEGSAQPEVQDEAQVTYAEKLSKEEAKLDWSLSAVQLERCIRAFNPWPVSYFVV- 241
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ ++Q++ PG +I +A + G + I +LQ AG + +
Sbjct: 242 ---DEQPIKVWQAQVLATVDNAAPGTIIHADKHGIQVATADGVLNITQLQPAGKKAMSAA 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 299 DLLNSRREWFTPGNQL 314
>gi|213963087|ref|ZP_03391345.1| methionyl-tRNA formyltransferase [Capnocytophaga sputigena Capno]
gi|213954171|gb|EEB65495.1| methionyl-tRNA formyltransferase [Capnocytophaga sputigena Capno]
Length = 309
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 86/308 (27%), Positives = 147/308 (47%), Gaps = 6/308 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VFMGT +FA+A+L+ALV +++++V V T +P+G RG K S V A+ +P
Sbjct: 3 KMRIVFMGTPDFALASLKALVENNYNVVGVVTVADKPSG-RGQKLHQSPVKVYAESKGIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P KL E + L +V ++P+ + K G +N HASLLP +RGAAP
Sbjct: 62 VLQPLKLKDENFLSELKALQPDLQIVVAFRMLPEVVWRLPKYGTFNLHASLLPNYRGAAP 121
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ +TG+ +D+ +DTG + PI ++ L +L + A +++
Sbjct: 122 INWAIINGEKQTGVTTFFIDEKIDTGAIIAQAVTPIDTHETAGTLHDKLMLQGADLVLKT 181
Query: 182 MDKLEQNNLPLSPQIENGITYA-EKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + PQ + KI K ++N+ + IR +SP+P AW E
Sbjct: 182 VDSIADGTCTTQPQDKEITFTEAPKIYKETCKINWEEYGMTIERLIRGMSPYPTAWAEFP 241
Query: 241 IGNKHERIKLLES--QLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ K+ ++ + G++ +A G ++++ LQ + + D
Sbjct: 242 HKGEKLAAKVYDAVFEPATHNEPIGKLFTEKKQLRVAVKDGFIQLLELQLPAKKRMKTAD 301
Query: 297 FLLGCPVI 304
L G
Sbjct: 302 LLNGFSFE 309
>gi|315223374|ref|ZP_07865233.1| methionyl-tRNA formyltransferase [Capnocytophaga ochracea F0287]
gi|314946705|gb|EFS98694.1| methionyl-tRNA formyltransferase [Capnocytophaga ochracea F0287]
Length = 316
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 91/313 (29%), Positives = 154/313 (49%), Gaps = 6/313 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VFMGT +FA+A+L+ALV + +++V V T +P+G RG K S V A+ +P
Sbjct: 5 KMRIVFMGTPDFALASLKALVENHYNVVGVVTVADKPSG-RGQKLHQSPVKLYAESKGIP 63
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P KL E + L +V ++P+ + K G +N HASLLP +RGAAP
Sbjct: 64 VLQPIKLKDETFVNALKALQPDLQIVVAFRMLPEVVWRLPKYGTFNLHASLLPNYRGAAP 123
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ ETG+ +D+ +DTG + PI S+ L +L V A +++
Sbjct: 124 INWAIINGEKETGVTTFFIDEKIDTGAIIAQEVTPIESHETAGTLHDKLMVQGAELVLKT 183
Query: 182 MDKLEQNNLPLSPQIENGIT-YAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + + + PQ + A KI K ++++ + +R +SP+P AW +
Sbjct: 184 VDSIAEGSCTTQPQNKEVTFAEAPKIYKETCKIDWQAEGMTIERLVRGMSPYPTAWTAFV 243
Query: 241 IGNKHERIKLLES--QLVEGEGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ ++ + V + GE V +A G ++++ LQ + + D
Sbjct: 244 QKGEVLNVKVYDALFEPVSHQYPIGELLVDKKGLRVAVKDGYIKLLELQLPAKKRMKTTD 303
Query: 297 FLLGCPVIIGCIV 309
L G I+
Sbjct: 304 LLNGFSFDNTTIL 316
>gi|113968374|ref|YP_732167.1| methionyl-tRNA formyltransferase [Shewanella sp. MR-4]
gi|123325548|sp|Q0HPA7|FMT_SHESM RecName: Full=Methionyl-tRNA formyltransferase
gi|113883058|gb|ABI37110.1| methionyl-tRNA formyltransferase [Shewanella sp. MR-4]
Length = 318
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 111/302 (36%), Positives = 172/302 (56%), Gaps = 7/302 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL++S H++++VYTQP RPAG RG K S V + A ++P
Sbjct: 3 PLNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAG-RGKKLTASPVKELAVSHNIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q L+ D+ VVVAYGL++P+ +L+ +LG N H S+LPRWRGAA
Sbjct: 62 VYQPGSLRKEPAQQELAALNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ IM+MD LDTG + +PI + +A L ++L++ A+++
Sbjct: 122 PIQRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSATLYEKLALQGPDALLQ 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ L L Q E YAEK+SK E R+++ +SA + +RA +P+P ++ E
Sbjct: 182 ALEGLANGTLTAEKQDEALANYAEKLSKEEARLDWSKSATQLWQEVRAFNPWPVSYFE-- 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ + PG +I +A G + ++ +Q G + L + D
Sbjct: 240 HQGNTIKVWQTQVSTTSSNAAPGTIISASKKGIEVATGDGVLTLLSMQLPGKKPLSVADI 299
Query: 298 LL 299
L
Sbjct: 300 LN 301
>gi|332883248|gb|EGK03531.1| methionyl-tRNA formyltransferase [Dysgonomonas mossii DSM 22836]
Length = 323
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 105/318 (33%), Positives = 169/318 (53%), Gaps = 12/318 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT +FAV +L+ LV + ++IV V T P +P+G RG K SAV K A E +LP
Sbjct: 6 LRIVFMGTPDFAVESLKKLVENGYNIVGVITMPDKPSG-RGYKIQYSAVKKYALEQNLPL 64
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E + L +V ++P+ + + +LG +N H SLLP++RGAAPI
Sbjct: 65 LQPEKLKDETFLSELKALEADLQIVVAFRMLPEVVWDMPRLGTFNLHGSLLPQYRGAAPI 124
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
+I+ GD ETG+ + +DTG + K+ I N N + EL V+ A + + +
Sbjct: 125 NWSIINGDKETGVTTFFLTHEIDTGKIILQEKIKIGENDNAGKIHDELMVVGAELVQKTV 184
Query: 183 DKLEQNNLPLSPQ-----IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
D + + ++ Q E + +A KI K R+++ + A +HN IR +SP+P AW
Sbjct: 185 DMILEGSVDAVDQKQFFYDEKELRHAPKIFKETCRIDWNKPAGEIHNLIRGMSPYPTAWT 244
Query: 238 EMMIG-NKHERIKLLESQLVEGEGK--PGEVINPN---FTIACSQGAVRIMRLQRAGGRV 291
E++ + + +K+ S+++ PG ++ N IACS G + + +Q AG +
Sbjct: 245 ELLSDGKEPQMVKIYRSKVISSANTVVPGAILTDNKTYLHIACSDGLISVEEIQFAGKKA 304
Query: 292 LDIGDFLLGCPVIIGCIV 309
+ + L G + G
Sbjct: 305 MKTDEVLRGYKIEEGAYF 322
>gi|329849465|ref|ZP_08264311.1| methionyl-tRNA formyltransferase [Asticcacaulis biprosthecum C19]
gi|328841376|gb|EGF90946.1| methionyl-tRNA formyltransferase [Asticcacaulis biprosthecum C19]
Length = 309
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 121/310 (39%), Positives = 167/310 (53%), Gaps = 5/310 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ FMGT EFAV L LV++ H IV VY+QPP P G RG S VH A LP
Sbjct: 1 MRLAFMGTPEFAVKALAELVAAGHDIVCVYSQPPAPKG-RGQVLSPSPVHAFAASLGLPV 59
Query: 63 LVPT-KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + +F + + D +VVAYG ++ + +L+ LG +N HASLLPRWRGAAP
Sbjct: 60 RTPKSMKDADAIAEFQALDIDACIVVAYGQILKKAVLDHPPLGCFNLHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD+ TG+ +M+M + LD G + +V I+ L +L+ L A + A
Sbjct: 120 IQRAIMAGDSHTGVEVMRMSEGLDEGAIILSGRVEITDEDTAQSLHDKLATLGASLLPVA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ Q A KI+ E R+++ R A + HIR LSPFPGAW M
Sbjct: 180 LAAIERGGANEQEQSGEVTY-ARKITPEEARIDWDRPARELDWHIRGLSPFPGAWTTMAT 238
Query: 242 GNKHERIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
G R+K+L S+L + PG ++ +A G ++I+RLQR G D DFL
Sbjct: 239 GKGEVRVKVLMSRLSDEHSGETPGTLLLGGLKVATGDGVIQILRLQREGKAAQDALDFLN 298
Query: 300 GCPVIIGCIV 309
G + G
Sbjct: 299 GTDLQPGDRF 308
>gi|322384329|ref|ZP_08058027.1| methionyl-tRNA formyltransferase-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321150831|gb|EFX44268.1| methionyl-tRNA formyltransferase-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 317
Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 160/316 (50%), Gaps = 9/316 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT EFAV +L+A+++ H + +V TQP RP G R V +A++ +P
Sbjct: 1 MKLIFMGTPEFAVPSLKAVLTEGHEVAAVVTQPDRPKG-RKRVLTPPPVKIEAEKHGIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K + ++ D+ V AYG ++P+ +L +LG N HASLLP++RG AP
Sbjct: 60 YQPEKLRQSDVIDRIREIAPDLIVTAAYGQILPKSLLEVPRLGCINIHASLLPKYRGGAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A+M GD TG+ IM + + LDTG + +VPI + ++L+ A +
Sbjct: 120 IHHAVMNGDPVTGVTIMYIAEGLDTGDMISKVEVPIMDEDTAGSMFKKLAAAGADLLRRT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM-- 239
+ L ++ PQ E Y+ I++ ++++ R++ + N IR L+PFPGA+
Sbjct: 180 LPGLMDGSIQAVPQNEKEAVYSPNITRENEKIDWSRTSLQIFNQIRGLNPFPGAYTLWNG 239
Query: 240 --MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDI 294
M ++ + + PG V++ +A G++ + +Q G + +D+
Sbjct: 240 AIMKVWACQKPSINSGPEAVKDPVPGTVLSCTVNGIEVATGDGSLILTTIQSPGKKAMDV 299
Query: 295 GDFLLGCPVIIGCIVG 310
F G + G I+G
Sbjct: 300 AQFARGSSIPNGTILG 315
>gi|91205376|ref|YP_537731.1| methionyl-tRNA formyltransferase [Rickettsia bellii RML369-C]
gi|122990925|sp|Q1RJ22|FMT_RICBR RecName: Full=Methionyl-tRNA formyltransferase
gi|91068920|gb|ABE04642.1| Methionyl-tRNA formyltransferase [Rickettsia bellii RML369-C]
Length = 304
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 113/303 (37%), Positives = 175/303 (57%), Gaps = 10/303 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT EFAV L L++S+H +V+ +TQPP+ G RGL S +H+ A E +P
Sbjct: 1 MKIIFMGTPEFAVPALTKLINSNHKVVAAFTQPPKAKG-RGLSETKSPIHQLADEAQIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
PT +E + +AD+ VV+AYG +IPQ IL+A K G N H S LPR RGAAP
Sbjct: 60 YTPTTLRNEEAANLINNIDADIIVVIAYGFIIPQNILDAKKYGCLNIHPSDLPRHRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QR I+ GD + + IM+MD LDTG + + I L + + L A +++
Sbjct: 120 LQRTIIEGDKTSSVCIMQMDAGLDTGDILMKEDFDLPKKITLQELHDKCANLGAELLIKT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +++ PQ G+TY K++K E RVN+ SA +++ +R ++P+PG + +
Sbjct: 180 LANIDKIVPK--PQSNEGVTYTHKLTKEEGRVNWQDSAFSINCKVRGMNPWPGVYFKY-- 235
Query: 242 GNKHERIKLLESQLV--EGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ IK+LE++ E PG +IN N IAC +G + I +LQ+ G +VL+I +FL
Sbjct: 236 --NDKTIKILEAEYSDEEHNFTPGTIINKNLEIACGKGILMIKKLQQEGKKVLNIEEFLR 293
Query: 300 GCP 302
G
Sbjct: 294 GFK 296
>gi|226313316|ref|YP_002773210.1| methionyl-tRNA formyltransferase [Brevibacillus brevis NBRC 100599]
gi|226096264|dbj|BAH44706.1| methionyl-tRNA formyltransferase [Brevibacillus brevis NBRC 100599]
Length = 316
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 104/316 (32%), Positives = 168/316 (53%), Gaps = 14/316 (4%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R++FMGT +FAV++L A++ + ++++ V TQP RP G R V + A L L
Sbjct: 5 RILFMGTPDFAVSSLTAVLEAGYNVIGVVTQPDRPVG-RKQVLTPPPVKEAALRHGLLVL 63
Query: 64 VPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P K+ EE E+ L+ D+ + AYG ++P+++L+A K G N HASLLP++RG API
Sbjct: 64 QPEKIKAEEALEEVLALKPDLIITAAYGQILPKKLLDAPKYGCINVHASLLPKYRGGAPI 123
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
++I+ G+ ETG+ IM M + LD G + VPI L +L+ + ++ +
Sbjct: 124 HKSIVEGEAETGVTIMYMVEALDAGDMLSKVVVPIEERDTVGTLHDKLAAAGSELLIATV 183
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
L L Q + T+A I + + ++++ RSAE ++N +R L+P+P A+
Sbjct: 184 PPLLAGELVAEQQDHSEATFAPNIKRTDEKIDWSRSAEQIYNQVRGLNPWPVAFTT---- 239
Query: 243 NKHERIKLLESQLVEGEGK---PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + KL + + G+ PG +I +AC GAV+I LQ G + + D
Sbjct: 240 CEGKIWKLWWVEKMPASGEGKEPGTIIACEEDGIVVACGSGAVKITELQPEGKKRMSALD 299
Query: 297 FLLGC--PVIIGCIVG 310
FL G + IG VG
Sbjct: 300 FLRGAGSSIEIGTKVG 315
>gi|149182345|ref|ZP_01860823.1| methionyl-tRNA formyltransferase [Bacillus sp. SG-1]
gi|148849964|gb|EDL64136.1| methionyl-tRNA formyltransferase [Bacillus sp. SG-1]
Length = 316
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 98/318 (30%), Positives = 167/318 (52%), Gaps = 14/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT +F+V+ LQ L+ + + I+ V TQP RP G R V +A++ +
Sbjct: 1 MT-KIVFMGTPQFSVSVLQNLIENDYDIIGVVTQPDRPVG-RKRVMTPPPVKVEAEKHGI 58
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K+ ++E E+ LS D+ V A+G ++P+ +L + K G N HASLLP RG
Sbjct: 59 PVYQPEKIREKEELEKVLSLQPDLIVTAAFGQILPKELLESPKFGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +I+ G TG+ IM M + LD G + +V I + L +LS A ++
Sbjct: 119 APIHYSIIQGKKTTGVTIMYMVEKLDAGDMISSVEVEIDERDHVGTLHDKLSEAGAKLLI 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + L + Q E +T+A I + + ++++ ++ E ++NH+R + P+P A+ +
Sbjct: 179 DTLPALLNGEISPQKQDEGKVTFAWNIKREQEKIDWTKTGEEIYNHVRGMHPWPVAYTLL 238
Query: 240 MIGNKHERIKLLESQLVEGE-GKPGEVIN---PNFTIACSQ-GAVRIMRLQRAGGRVLDI 294
+K+ S+ VEG G PGE+ + +A +++I LQ +G + +
Sbjct: 239 EGS----VLKVWWSEKVEGSAGAPGEITSVEEDGIVVATGSTTSIKITELQPSGKKRMSA 294
Query: 295 GDFLLGCP--VIIGCIVG 310
D+L G + G +G
Sbjct: 295 KDYLRGAGSFIEKGMKMG 312
>gi|168182586|ref|ZP_02617250.1| methionyl-tRNA formyltransferase [Clostridium botulinum Bf]
gi|182674259|gb|EDT86220.1| methionyl-tRNA formyltransferase [Clostridium botulinum Bf]
Length = 313
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 89/318 (27%), Positives = 167/318 (52%), Gaps = 16/318 (5%)
Query: 3 LR---VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
++ +VFMGT +FAV +L+ ++ ++ +V+TQP RP G RG K +SAV + A + +
Sbjct: 1 MKDTTIVFMGTPDFAVPSLKKIIE-KFNVKAVFTQPDRPKG-RGKKLAMSAVKEVALQNN 58
Query: 60 LPALVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+ P K + ++ N D +VVA+G ++ + +L+ K G N HASLLP++R
Sbjct: 59 IEVYQPIKLKNDEICIKKLKEINPDFIIVVAFGQILSKEVLDIPKYGCINLHASLLPKYR 118
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI AI+ G+ E+G M MD+ LDTG + V I ++ L L +
Sbjct: 119 GAAPINWAIIKGEKESGNTTMFMDEGLDTGDMLLKNTVKIEDDMTFGELHDILMETGSEL 178
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+V+ + L++ + Q I YA ++K ++++ ++++ ++ IR L+P P A+
Sbjct: 179 LVDTIKGLKEGTIKREKQKSENIIYASMLNKQMGKIDWNKTSKEINLLIRGLNPRPVAYT 238
Query: 238 EMMIGNKHERIKLLESQLVE--GEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGRVL 292
+ +E +K+ S +++ PG ++ +A G + I +Q G + +
Sbjct: 239 QYK----NETMKIYNSSILKESSNKTPGTILKVSKVGIKVATGDGILSITTVQFPGKKPM 294
Query: 293 DIGDFLLGCPVIIGCIVG 310
+ +++ G + G ++G
Sbjct: 295 KVEEYIKGHTIEEGLVLG 312
>gi|188535244|ref|YP_001909041.1| 10-formyltetrahydrofolate:L-methionyl-tRNA (FMet)
N-formyltransferase [Erwinia tasmaniensis Et1/99]
gi|238692006|sp|B2VK94|FMT_ERWT9 RecName: Full=Methionyl-tRNA formyltransferase
gi|188030286|emb|CAO98175.1| 10-formyltetrahydrofolate:L-methionyl-tRNA (FMet)
N-formyltransferase [Erwinia tasmaniensis Et1/99]
Length = 315
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 112/316 (35%), Positives = 177/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+L+++F GT +FA L AL+SS H +V V+TQP RPAG RG + S V + A + ++P
Sbjct: 4 SLKIIFAGTPDFAARHLDALLSSGHQVVGVFTQPDRPAG-RGNRVTASPVKQLAAQHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE +Q ++ DV VVVAYGL++P+ +L + G N H SLLPRWRGAA
Sbjct: 63 VFQPESLRSEENQQKVAALNADVMVVVAYGLILPKLVLEMPRHGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + PI + +A L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDIGLDTGDMLHKLSCPIEAADTSATLYDKLADLGPAGLLT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + Q E+ ++YAEK+SK E R+++ SA+ + IRA +P+P ++ +
Sbjct: 183 TLAQLADGSARPQVQDESLVSYAEKLSKEEARLDWSLSAQQLERCIRAFNPWPISYFVI- 241
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++ +PGE++ + + G + I LQ AG + +
Sbjct: 242 ---DEQPVKVWKASVLPAVNGHQPGEILQANKQGIQVVTADGVLNIEELQPAGKKAMKAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G I+
Sbjct: 299 DLLNSRREWFTPGNII 314
>gi|311029971|ref|ZP_07708061.1| methionyl-tRNA formyltransferase [Bacillus sp. m3-13]
Length = 315
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 161/317 (50%), Gaps = 10/317 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M ++VFMGT +FAV LQ ++ + +++V TQP RP G R V +A++ ++
Sbjct: 1 MKKKIVFMGTPDFAVPVLQQIIQDGYEVIAVVTQPDRPKG-RKKVLTPPPVKVEAEKHNI 59
Query: 61 PALVPTKLGQ-EEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K+ + EYE+ S D+ V A+G ++P+ +L+A K G N HASLLP+ RG
Sbjct: 60 PVYQPEKIKEAAEYEKITSLEPDLIVTAAFGQILPKPLLDAPKFGCINVHASLLPKLRGG 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +I+ G +TG+ IM M + LD G + +V I + L +LSV + +
Sbjct: 120 APIHYSIIQGHEKTGVTIMYMVEKLDAGDMLTQVEVRIDERDHVGTLHDKLSVAGSKLLS 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + +L L Q T+A I + + ++++ + E ++NHIR L P+P A+ M
Sbjct: 180 ETLPQLFDEKLQAEVQNHEEATFASNIKREQEKIDWTKDGEQIYNHIRGLHPWPVAYTTM 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIG 295
+ ++ E + E PG +I + F + ++I LQ AG + +
Sbjct: 240 E--GQVMKVWWGEKTQITYEAVPGTIIGIEDDGFIVKTGNSTGIKITDLQLAGKKRMTGT 297
Query: 296 DFLL--GCPVIIGCIVG 310
+L G + G +G
Sbjct: 298 QYLNGAGASLSEGTKLG 314
>gi|229019064|ref|ZP_04175902.1| Methionyl-tRNA formyltransferase [Bacillus cereus AH1273]
gi|229025308|ref|ZP_04181727.1| Methionyl-tRNA formyltransferase [Bacillus cereus AH1272]
gi|228735999|gb|EEL86575.1| Methionyl-tRNA formyltransferase [Bacillus cereus AH1272]
gi|228742232|gb|EEL92394.1| Methionyl-tRNA formyltransferase [Bacillus cereus AH1273]
Length = 314
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 106/313 (33%), Positives = 165/313 (52%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + +V V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ AD+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLKIREKDEYEKVLALEADLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVGIDERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E+ +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEDEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E + + +PG ++ F +A V+I LQ +G + + F
Sbjct: 240 -GQVVKVWWGEKVSMAEKAEPGTIVAYEEDGFVVATGNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|329295653|ref|ZP_08252989.1| methionyl-tRNA formyltransferase [Plautia stali symbiont]
Length = 314
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 116/315 (36%), Positives = 175/315 (55%), Gaps = 12/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+++F GT +FA L AL++S H +V V+TQP RPAG RG K V AQ +P
Sbjct: 4 PLKIIFAGTPDFAARHLDALLASEHQVVGVFTQPDRPAG-RGNKLTPGPVKVLAQAHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE +Q ++ DV VVVAYGL++PQ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPRSLKPEENQQLVAGLQADVMVVVAYGLILPQAVLTIPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD+ETG+ IM+MD LDTG + PI+++ +A L +L+ L M+
Sbjct: 123 PIQRSLWAGDSETGVTIMQMDVGLDTGDMLHKITCPINADDTSASLYDKLAQLGPQGMLT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L + Q E +TYAEK+SK E R+++ SA + IRA +P+P ++ +
Sbjct: 183 TLSLLAAGSAQPEVQDETLVTYAEKLSKEEARLDWSLSAVQLERCIRASNPWPVSYFLID 242
Query: 241 IGNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ ++ ++ +PGE++ IA G + ++ LQ AG + + D
Sbjct: 243 D----QPVKVWQASVLPHRTAQPGEILQADKHGIQIATVDGVLNLLSLQPAGKKAMAAQD 298
Query: 297 FLLGCP--VIIGCIV 309
L G ++
Sbjct: 299 LLNSRREWFTPGTVL 313
>gi|317494308|ref|ZP_07952722.1| methionyl-tRNA formyltransferase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917558|gb|EFV38903.1| methionyl-tRNA formyltransferase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 315
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 117/305 (38%), Positives = 175/305 (57%), Gaps = 7/305 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H IV V+TQP RPAG RG K S V A++ +LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSQHQIVGVFTQPDRPAG-RGNKLTPSPVKVLAEQHNLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E+ ++ +S DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPEDNQKLVSDLNADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ IM+MD LDTG + PI++ +A L +L+ + ++
Sbjct: 123 PIQRALWAGDAETGVTIMQMDVGLDTGDMLHKVSCPITAQDTSATLYDKLAEMGPQGLLA 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E R+N+ SA + +RA +P+P ++ M
Sbjct: 183 TLAELANGTATPEKQDEALVTYAEKLSKEEARLNWTLSAAQLERCVRAFNPWPVSFF--M 240
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
I + ++ ++ E PG +I +A ++GA+ + +LQ +G + + D
Sbjct: 241 IDGQPVKVWQSQAIAAEQNQAPGTIISADKHGIAVATAEGALLMTQLQPSGKKSMSAQDL 300
Query: 298 LLGCP 302
L
Sbjct: 301 LNSRR 305
>gi|317503446|ref|ZP_07961484.1| methionyl-tRNA formyltransferase [Prevotella salivae DSM 15606]
gi|315665434|gb|EFV05063.1| methionyl-tRNA formyltransferase [Prevotella salivae DSM 15606]
Length = 326
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 160/317 (50%), Gaps = 15/317 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+VFMGT EFAVA+LQ LV +++V+V TQP +P GR + S V + A+
Sbjct: 1 MKKEELRIVFMGTPEFAVASLQRLVEGGYNVVAVVTQPDKPVGRHQQQVQASPVKQYAET 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P K+ + + L+ VV ++P+ + + G +N HA+LLP++R
Sbjct: 61 HGLPVLQPVKMKDPVFVEQLAQYKADLQVVVAFRILPEIVWAMPRFGTFNVHAALLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ G+ ETG+ +DK++DTG + + I + + + L L A
Sbjct: 121 GAAPINWAVINGETETGVTTFFLDKNIDTGRIIMQKHFSIPDDADVEYVYNGLMNLGADI 180
Query: 178 MVEAMDKLEQNNLP--------LSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL 229
E +DK+ +N+ E+ + A KI K +++ + V++ +R L
Sbjct: 181 ATETIDKMLENDGNIDSIAQSSFMQFNEDELLPAPKIFKETCEIDWHLPVKRVYDFVRGL 240
Query: 230 SPFPGAWLEMMIGNKHERIKLLESQLVEG--EGKPGEV--INPNFTIACSQGAVRIMRLQ 285
SP+PG W + + +K+ ++ EG+ G V + + + CS G + ++ LQ
Sbjct: 241 SPYPGTWTTIDENGQRSVLKIFKTAKTSETWEGELGCVRTLKGHLFVRCSDGWLELLELQ 300
Query: 286 RAGGRVLDIGDFLLGCP 302
G + + DFL G
Sbjct: 301 PVGKKRMTARDFLNGMR 317
>gi|315222003|ref|ZP_07863914.1| methionyl-tRNA formyltransferase [Streptococcus anginosus F0211]
gi|315188969|gb|EFU22673.1| methionyl-tRNA formyltransferase [Streptococcus anginosus F0211]
Length = 311
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 95/316 (30%), Positives = 159/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT ++FMGT +F+ L+ L+ S + I++V TQP R G R + ++ V + A ++
Sbjct: 1 MT-NIIFMGTPDFSATVLKGLLESKQYEILAVVTQPDRAVG-RKKEIRMTPVKELALDYG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + L +V A L + N HASLLP++RG
Sbjct: 59 LPVYQPEKLSKSAELDSLMNLNADGIVTAAFGQFLPSKLLDSVCFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ GD E G+ IM+M K +D G + R +PI N + ++L+++ ++
Sbjct: 119 APIHYAIINGDKEAGVTIMEMVKEMDAGDMIAHRAIPIEETDNVGTMFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ +N +T++ IS E R+++ ++ + N IR + P+P A +
Sbjct: 179 DTLPSYLSGDIKPVPQDKNQVTFSPNISPEEERIDWTKTNRQLFNQIRGMYPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG G+PGE++ +A +GA+ + +Q AG + I D
Sbjct: 239 NGD----RFKIYEATPVEGAGQPGEILAIGKKELIVAAGEGALSLKTVQPAGKPKMTIVD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGLGRQLSVGDFFG 310
>gi|296386490|ref|ZP_06875989.1| methionyl-tRNA formyltransferase [Pseudomonas aeruginosa PAb1]
Length = 314
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 128/318 (40%), Positives = 179/318 (56%), Gaps = 13/318 (4%)
Query: 1 MT--LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M+ LR+VF GT EFA L+AL+ + H IV+VYTQP RPAG RG K + SAV A E
Sbjct: 1 MSQALRIVFAGTPEFAAEHLKALLDTPHRIVAVYTQPDRPAG-RGQKLMPSAVKSLALEH 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP + P L E + L+ D+ VVVAYGL++PQ +L+ +LG N HASLLPRWR
Sbjct: 60 GLPVMQPQSLRNAEAQAELAVLRADLMVVVAYGLILPQAVLDIPRLGCINSHASLLPRWR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPIQRA+ AGD E+G+ +M+M+ LDTGP+ PIS+ L L+ L A
Sbjct: 120 GAAPIQRAVEAGDAESGVTVMQMEAGLDTGPMLLKVSTPISAADTGGSLHDRLAALGPKA 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+VEA+ L L Q + TYA K++K E R+++ R A + +RA +P+P
Sbjct: 180 VVEAIAGLAAGTLHGEIQDDALATYAHKLNKDEARLDWSRPAVELERQVRAFTPWPVCHT 239
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +K+L + L +G G PG ++ +AC +GA+ + RLQ GG+ L
Sbjct: 240 SLADAP----LKVLGASLGQGSGAPGTILEASRDGLLVACGEGALHLTRLQLPGGKPLAF 295
Query: 295 GDFLLGCP--VIIGCIVG 310
D G ++G
Sbjct: 296 ADLYNSRREQFAAGQVLG 313
>gi|156932267|ref|YP_001436183.1| hypothetical protein ESA_00038 [Cronobacter sakazakii ATCC BAA-894]
gi|166214894|sp|A7MPE8|FMT_ENTS8 RecName: Full=Methionyl-tRNA formyltransferase
gi|156530521|gb|ABU75347.1| hypothetical protein ESA_00038 [Cronobacter sakazakii ATCC BAA-894]
Length = 315
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 114/316 (36%), Positives = 177/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SSSH +V V+TQP RPAG RG K + V AQE +P
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSSHQVVGVFTQPDRPAG-RGKKLMPGPVKVLAQENDIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E ++ ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPKSLRSAENQELVAALNADVMVVVAYGLILPEAVLSMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MDK LDTG + PI+++ +A L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDKGLDTGDMLRKLSCPITADDTSASLYDKLAQLGPQGLLA 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L Q + TYA+K+SK E R+++ SA + IRA +P+P ++ +
Sbjct: 183 TLEDLAAGRAVPEKQDDAQATYADKLSKEEARLDWTLSAAQLERCIRAFNPWPVSFFMI- 241
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++ + PG ++ +A + G + + LQ AG + +
Sbjct: 242 ---DEQPVKVWKASVIRQQSHATPGTILDAGKQGIQVATTDGILNLESLQPAGKKPMSAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G I+
Sbjct: 299 DLLNSRREWFTPGAIL 314
>gi|315646178|ref|ZP_07899298.1| methionyl-tRNA formyltransferase [Paenibacillus vortex V453]
gi|315278377|gb|EFU41693.1| methionyl-tRNA formyltransferase [Paenibacillus vortex V453]
Length = 313
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 94/313 (30%), Positives = 162/313 (51%), Gaps = 7/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT FAV +L+ L+ +SI +V TQP RP G R + V + A +P
Sbjct: 1 MKIVFMGTPAFAVPSLEMLIVEGYSIAAVVTQPDRPQG-RKKVLTPTPVKEAALRHGIPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P +L E + D+ V AYG ++P+ +L+ LG N H SLLP +RG AP
Sbjct: 60 LQPQRLRSPEAVAELAEYKPDLIVTAAYGQILPKSVLDMPSLGCLNVHGSLLPAYRGGAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQR+I+ G+ TGI +M M + LDTG + +VPI + ++LS A + +
Sbjct: 120 IQRSIINGEAVTGITLMYMAEGLDTGDMIAKAEVPIEETDTAGTMFEKLSQAGAKLLQQE 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM-- 239
+ +L + + PQ E TYA +++ + ++++ RS+ ++N IR L P+ G +
Sbjct: 180 LPRLVKGKVDAEPQDEAKATYAPNLTRDDEKIDWSRSSREIYNQIRGLVPYSGGFTLWNG 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +Q+V E +PG V+ + G++ ++ +Q +G + +D
Sbjct: 240 EVFKVWAAANPSSAQVVSSEAQPGTVLGLHEEGIVVKTGDGSLTLLTVQPSGKKAMDAAQ 299
Query: 297 FLLGCPVIIGCIV 309
F+ G + +G ++
Sbjct: 300 FVRGTSLAVGTVL 312
>gi|127514665|ref|YP_001095862.1| methionyl-tRNA formyltransferase [Shewanella loihica PV-4]
gi|166215511|sp|A3QJF5|FMT_SHELP RecName: Full=Methionyl-tRNA formyltransferase
gi|126639960|gb|ABO25603.1| methionyl-tRNA formyltransferase [Shewanella loihica PV-4]
Length = 324
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 112/316 (35%), Positives = 174/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+++F GT +FA LQAL+ S H ++ VY+QP RPAG RG K S V A E +P
Sbjct: 3 PLKILFAGTPDFAARHLQALIDSEHQVIGVYSQPDRPAG-RGKKLQASPVKALALEHDIP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ + + AD+ VVVAYGL++PQ +L+ +LG N H S+LPRWRGAA
Sbjct: 62 VYQPVSLRNEDAQAELAALGADIMVVVAYGLILPQVVLDTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD TG+ IM+MD LDTG + +PI +A L ++L+ A+++
Sbjct: 122 PIQRALWAGDAATGVTIMQMDIGLDTGDMLLKTHLPIEDRDTSASLYEKLAEQGPSALIQ 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L + +L PQ E YAEK+SK E ++++ + AE + +RA +P+P +
Sbjct: 182 ALKGLAEGSLTPEPQDEALANYAEKLSKEEAQLDWRKPAEQLWREVRAFNPWPASHF--- 238
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++ IK+ ++ + K PG +I +A +GA+ + +Q G + + +
Sbjct: 239 -PHQDAAIKVWQASVSIEAAKQAPGTIIRADKQGIAVATGEGALVLETIQLPGKKAMAVA 297
Query: 296 DFLL--GCPVIIGCIV 309
D L G G +
Sbjct: 298 DVLNARGDWFTPGTQL 313
>gi|254507345|ref|ZP_05119481.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus 16]
gi|219549805|gb|EED26794.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus 16]
Length = 315
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 178/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 PLKIVFAGTPDFAAHHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKNIALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDEAKQELADLNADIMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGDNETG+ IM+MD LDTG + + +PI + +A + ++L+ L A+VE
Sbjct: 123 PIQRSIWAGDNETGVTIMQMDIGLDTGDMLKIATLPIEATDTSATMYEKLAELGPDALVE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + Q + YA+K+SK E R+N+ A ++ +RA +P+P ++ E
Sbjct: 183 CLADIAEGKAVPEKQDDELANYAKKLSKEEARINWADDAAHIERCVRAFNPWPMSYFEAA 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S++ E + G ++ +A G + + +LQ G + + +
Sbjct: 243 ENS----IKVWQSRVDEQTSDKPAGTILQADKTGIYVATGNGVLVLEQLQVPGKKAMSVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G +
Sbjct: 299 DILNSRASWFEVGTQL 314
>gi|58040266|ref|YP_192230.1| methionyl-tRNA formyltransferase [Gluconobacter oxydans 621H]
gi|73919396|sp|Q5FPX2|FMT_GLUOX RecName: Full=Methionyl-tRNA formyltransferase
gi|58002680|gb|AAW61574.1| Methionyl-tRNA formyltransferase [Gluconobacter oxydans 621H]
Length = 304
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 120/312 (38%), Positives = 182/312 (58%), Gaps = 14/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT +F+V L AL+ + H +V+VYTQPPRPAG RG S VH+ A+ +
Sbjct: 1 MRLIFMGTPDFSVPALHALLDAGHEVVAVYTQPPRPAG-RGKALRRSPVHEAAEAAGIEV 59
Query: 63 LVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ ++ +E F + NAD AVV AYGL++P+ +L+A +LG N HASLLPRWRGA+
Sbjct: 60 RTPARVRRDTAEHEAFAALNADAAVVAAYGLILPKAMLDAPRLGCLNIHASLLPRWRGAS 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI+AGD+++G++IM+MD+ LDTG V PI + L +
Sbjct: 120 PIQSAIVAGDSQSGVSIMQMDEGLDTGAVLLEEATPI----SATDTASTLHDRLSEIGGR 175
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + PQ E+G+TYAE++++ R+++ RSA + IR L+P+PGA+ +
Sbjct: 176 LVVRALAEQPKPVPQPEDGVTYAERLTRDHGRIDWTRSAAEIDRQIRGLTPWPGAFTTLD 235
Query: 241 IGNKHERIKLLESQLVE---GEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+K+ + + PG + + TIAC GA+RI RLQ+ G ++ DF
Sbjct: 236 D----VVLKIGAATPLPAESHSAAPGTTLGESLTIACGTGALRIDRLQKPGRSMMSASDF 291
Query: 298 LLGCPVIIGCIV 309
L G PV G +
Sbjct: 292 LRGQPVPKGTRL 303
>gi|229061469|ref|ZP_04198814.1| Methionyl-tRNA formyltransferase [Bacillus cereus AH603]
gi|228717892|gb|EEL69540.1| Methionyl-tRNA formyltransferase [Bacillus cereus AH603]
Length = 314
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 103/313 (32%), Positives = 161/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + +V V TQP RP G R + V +A++ +P
Sbjct: 2 MKVVFMGTPDFSVPVLRRLIEDGYDVVGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P ++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 VQPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + +++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQSEAEVTFAYNIKREQEIIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E + + +PG ++ F +A V+I LQ +G + + F
Sbjct: 240 -GQVIKVWWGEKVSITEKAEPGTIVALEEDGFVVATGNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
G IG +G
Sbjct: 299 SRGTKPEIGTKLG 311
>gi|145300987|ref|YP_001143828.1| methionyl-tRNA formyltransferase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|172044481|sp|A4ST58|FMT_AERS4 RecName: Full=Methionyl-tRNA formyltransferase
gi|142853759|gb|ABO92080.1| methionyl-tRNA formyltransferase [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 314
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 118/316 (37%), Positives = 180/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+++F GT +FA L AL+SS H +V+VYTQP +PAG RG K S V + A +LP
Sbjct: 3 KLKLIFAGTPDFAARHLAALLSSDHEVVAVYTQPDKPAG-RGQKLTASPVKELALTHNLP 61
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +EE + L+ AD+ VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 62 VYQPASLRKEEAQAELASLGADLMVVVAYGLILPKVVLDTPRLGCINVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + PI++N + L +L+ L A+V+
Sbjct: 122 PIQRSIWAGDTETGVTIMQMDVGLDTGAMIRKVTCPIAANETSTSLYDKLAELGPQALVD 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ + Q + YAEK+SK E R+++ A + IRA +P+P +W E+
Sbjct: 182 TINAMAAGETAAEEQDDALANYAEKLSKEEARIDWSMEAVAIDRCIRAFNPWPISWFEVA 241
Query: 241 IGNKHERIKLLESQLVEGE-GKP-GEVINP---NFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +++++ + G+P G ++ IA G +R++ LQ G + + +
Sbjct: 242 G----QTIKVWQAEVINSDHGQPTGTLLKADKQGIDIATGLGVLRLLTLQPPGKKAMSVS 297
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 298 DLLNSRRDWFEPGTQL 313
>gi|325567767|ref|ZP_08144378.1| methionyl-tRNA formyltransferase [Enterococcus casseliflavus ATCC
12755]
gi|325158540|gb|EGC70687.1| methionyl-tRNA formyltransferase [Enterococcus casseliflavus ATCC
12755]
Length = 319
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 101/320 (31%), Positives = 162/320 (50%), Gaps = 15/320 (4%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M + ++VFMGT F+V L+ L+ + + + +V TQP RP G R + V + A +
Sbjct: 1 MKMTKIVFMGTPAFSVPILEGLLEAGYEVAAVVTQPDRPVG-RKKTITPTPVKEAALKHR 59
Query: 60 LPALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
L L P K+ E EQ + D+ + A+G +P +L K G N HASLLP++RG
Sbjct: 60 LLVLQPEKITGSPEMEQIQALAPDLLITAAFGQFLPSALLEVPKYGAINVHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP+ AIM G+ ETG+ IM+M K +D G + +PI++ + + +LS+L +
Sbjct: 120 GAPVHYAIMEGEQETGVTIMEMIKKMDAGGIFAQAHLPITAQDDVGTMFDKLSLLGKDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+E + K+ L PQ E +T++ IS+ + +++ ++A + +R + P+P A+
Sbjct: 180 LETLPKILSGELQPVPQEEAKVTFSPNISREQEAIDWQKTAVQIDAQVRGMRPWPIAFTT 239
Query: 239 MMIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVL 292
R KL + +E +PG +I IAC +G + I LQ AG
Sbjct: 240 ----QNGNRWKLWQVTPLEQTTTAQPGTIIERTKKTLLIACGEGTVLAIDELQPAGKGRQ 295
Query: 293 DIGDFLLGC--PVIIGCIVG 310
DI FL G + G VG
Sbjct: 296 DIAAFLNGSGQQIQKGDQVG 315
>gi|219669869|ref|YP_002460304.1| methionyl-tRNA formyltransferase [Desulfitobacterium hafniense
DCB-2]
gi|219540129|gb|ACL21868.1| methionyl-tRNA formyltransferase [Desulfitobacterium hafniense
DCB-2]
Length = 320
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 114/326 (34%), Positives = 175/326 (53%), Gaps = 24/326 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV TLQAL + H + V+TQP RP+G RG S V AQE LP
Sbjct: 1 MRLVFMGTPDFAVPTLQALAAHGHDVAGVFTQPDRPSG-RGKNLKPSPVKTAAQELGLPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ E + L +V +VVAYG ++ + IL G N HASLLP WRGAAP
Sbjct: 60 YQPPKVKSPESLEILKELAPEVIIVVAYGQLLSKEILGLPPYGCINVHASLLPDWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I +I+ GD TG+ M+MD+ LDTG + ++PI + T L L+ A ++
Sbjct: 120 IHWSILKGDQRTGVTTMQMDEGLDTGDMLLKTELPIGEDTTTGELHDALAQAGAQLLIAT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+++L + LP +PQ + YA +++ ++++ RSA+++HN IR L+P+PG+++
Sbjct: 180 LEQLHKGKLPRTPQKG-PVRYASLLTREHEKIDWARSAQDIHNQIRGLNPWPGSYILF-- 236
Query: 242 GNKHERIKLLESQLVE--------------GEGKPGEVI---NPNFTIACSQGAVRIMRL 284
+ E +K+ +S + + KPGE+I + +G +RI+ +
Sbjct: 237 --REETVKVWKSSISAQARGDGAEPGLPALKDFKPGEIIAWDQQGLLVQTGEGLIRIVEV 294
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIVG 310
Q AG + + DF LG G G
Sbjct: 295 QPAGKKPMPARDFFLGRRGQAGESFG 320
>gi|30263869|ref|NP_846246.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. Ames]
gi|47529296|ref|YP_020645.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186716|ref|YP_029968.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. Sterne]
gi|52141620|ref|YP_085207.1| methionyl-tRNA formyltransferase [Bacillus cereus E33L]
gi|65321193|ref|ZP_00394152.1| COG0223: Methionyl-tRNA formyltransferase [Bacillus anthracis str.
A2012]
gi|118479088|ref|YP_896239.1| methionyl-tRNA formyltransferase [Bacillus thuringiensis str. Al
Hakam]
gi|165872274|ref|ZP_02216911.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. A0488]
gi|167636422|ref|ZP_02394721.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. A0442]
gi|167641157|ref|ZP_02399412.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. A0193]
gi|170688854|ref|ZP_02880057.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. A0465]
gi|170708783|ref|ZP_02899219.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. A0389]
gi|177654886|ref|ZP_02936603.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. A0174]
gi|190565782|ref|ZP_03018701.1| methionyl-tRNA formyltransferase [Bacillus anthracis
Tsiankovskii-I]
gi|196038628|ref|ZP_03105936.1| methionyl-tRNA formyltransferase [Bacillus cereus NVH0597-99]
gi|196047442|ref|ZP_03114654.1| methionyl-tRNA formyltransferase [Bacillus cereus 03BB108]
gi|218904996|ref|YP_002452830.1| methionyl-tRNA formyltransferase [Bacillus cereus AH820]
gi|225865847|ref|YP_002751225.1| methionyl-tRNA formyltransferase [Bacillus cereus 03BB102]
gi|227813226|ref|YP_002813235.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. CDC 684]
gi|228916503|ref|ZP_04080069.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228928914|ref|ZP_04091946.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935180|ref|ZP_04098007.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947585|ref|ZP_04109875.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229092909|ref|ZP_04224043.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock3-42]
gi|229123380|ref|ZP_04252584.1| Methionyl-tRNA formyltransferase [Bacillus cereus 95/8201]
gi|229186106|ref|ZP_04313275.1| Methionyl-tRNA formyltransferase [Bacillus cereus BGSC 6E1]
gi|229197977|ref|ZP_04324691.1| Methionyl-tRNA formyltransferase [Bacillus cereus m1293]
gi|229601192|ref|YP_002868103.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. A0248]
gi|254683425|ref|ZP_05147285.1| methionyl-tRNA formyltransferase [Bacillus anthracis str.
CNEVA-9066]
gi|254721398|ref|ZP_05183187.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. A1055]
gi|254735905|ref|ZP_05193611.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. Western
North America USA6153]
gi|254739847|ref|ZP_05197540.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. Kruger B]
gi|254751037|ref|ZP_05203076.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. Vollum]
gi|254756702|ref|ZP_05208731.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. Australia
94]
gi|301055357|ref|YP_003793568.1| methionyl-tRNA formyltransferase [Bacillus anthracis CI]
gi|33516850|sp|Q81WH2|FMT_BACAN RecName: Full=Methionyl-tRNA formyltransferase
gi|81686553|sp|Q636G0|FMT_BACCZ RecName: Full=Methionyl-tRNA formyltransferase
gi|166214873|sp|A0RHN9|FMT_BACAH RecName: Full=Methionyl-tRNA formyltransferase
gi|226704287|sp|B7JJV3|FMT_BACC0 RecName: Full=Methionyl-tRNA formyltransferase
gi|254789334|sp|C3P637|FMT_BACAA RecName: Full=Methionyl-tRNA formyltransferase
gi|254789335|sp|C3L761|FMT_BACAC RecName: Full=Methionyl-tRNA formyltransferase
gi|254789336|sp|C1EP90|FMT_BACC3 RecName: Full=Methionyl-tRNA formyltransferase
gi|30258513|gb|AAP27732.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. Ames]
gi|47504444|gb|AAT33120.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180643|gb|AAT56019.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. Sterne]
gi|51975089|gb|AAU16639.1| methionyl-tRNA formyltransferase [Bacillus cereus E33L]
gi|118418313|gb|ABK86732.1| methionyl-tRNA formyltransferase [Bacillus thuringiensis str. Al
Hakam]
gi|164711950|gb|EDR17490.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. A0488]
gi|167510937|gb|EDR86328.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. A0193]
gi|167528164|gb|EDR90951.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. A0442]
gi|170126268|gb|EDS95159.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. A0389]
gi|170667209|gb|EDT17969.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. A0465]
gi|172080397|gb|EDT65484.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. A0174]
gi|190562701|gb|EDV16667.1| methionyl-tRNA formyltransferase [Bacillus anthracis
Tsiankovskii-I]
gi|196021750|gb|EDX60445.1| methionyl-tRNA formyltransferase [Bacillus cereus 03BB108]
gi|196030351|gb|EDX68950.1| methionyl-tRNA formyltransferase [Bacillus cereus NVH0597-99]
gi|218539588|gb|ACK91986.1| methionyl-tRNA formyltransferase [Bacillus cereus AH820]
gi|225786962|gb|ACO27179.1| methionyl-tRNA formyltransferase [Bacillus cereus 03BB102]
gi|227005904|gb|ACP15647.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. CDC 684]
gi|228585456|gb|EEK43560.1| Methionyl-tRNA formyltransferase [Bacillus cereus m1293]
gi|228597282|gb|EEK54933.1| Methionyl-tRNA formyltransferase [Bacillus cereus BGSC 6E1]
gi|228660156|gb|EEL15792.1| Methionyl-tRNA formyltransferase [Bacillus cereus 95/8201]
gi|228690531|gb|EEL44314.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock3-42]
gi|228812105|gb|EEM58436.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228824545|gb|EEM70350.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830721|gb|EEM76326.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228843082|gb|EEM88164.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229265600|gb|ACQ47237.1| methionyl-tRNA formyltransferase [Bacillus anthracis str. A0248]
gi|300377526|gb|ADK06430.1| methionyl-tRNA formyltransferase [Bacillus cereus biovar anthracis
str. CI]
Length = 314
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 104/313 (33%), Positives = 161/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + ++ V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLRIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E V + G ++ F +A V+I LQ +G + + F
Sbjct: 240 -GQVVKVWWGEKVPVTKSAEAGTIVAIEEDGFVVATGNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|168186791|ref|ZP_02621426.1| methionyl-tRNA formyltransferase [Clostridium botulinum C str.
Eklund]
gi|169295199|gb|EDS77332.1| methionyl-tRNA formyltransferase [Clostridium botulinum C str.
Eklund]
Length = 309
Score = 187 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 93/314 (29%), Positives = 164/314 (52%), Gaps = 13/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT EFAV L++++ + ++ V+TQP RP G RG K +S V + A E ++
Sbjct: 1 MKIVFMGTPEFAVPALKSMIEN-FNVEGVFTQPDRPKG-RGKKLAMSPVKEVALENNIEV 58
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E D +VVAYG ++P+ +L K N HASLLP++RGAA
Sbjct: 59 YQPINLRKEPDFIEKLKRIQPDFIIVVAYGQILPKEVLEIPKYACINLHASLLPKYRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ AI+ G+ ++G M MD LDTG + ++V I+ ++ L L +V+
Sbjct: 119 PLNWAIINGEKKSGNTTMLMDVGLDTGDMLMTQEVDINDDMTAGELHDLLMTQGGDLLVD 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++K+ + Q ++ YA + K +++ +S +HN IR L+P+P A+
Sbjct: 179 TINKMVSGEITPIKQDDSKTCYASMLDKEMACIDWNKSVTEIHNLIRGLNPWPVAYTHY- 237
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ +S+++ K PG VI+ +AC+ G + + +Q G + L +
Sbjct: 238 ---NDKVMKIYKSRVLNENSKKTPGTVIDVSSEGIKVACNGGVLLVEEIQFPGKKSLKVE 294
Query: 296 DFLLGCPVIIGCIV 309
++ G + + I+
Sbjct: 295 QYIRGNSIDLESIL 308
>gi|229541138|ref|ZP_04430198.1| methionyl-tRNA formyltransferase [Bacillus coagulans 36D1]
gi|229325558|gb|EEN91233.1| methionyl-tRNA formyltransferase [Bacillus coagulans 36D1]
Length = 317
Score = 187 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 162/319 (50%), Gaps = 15/319 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +VVF+GT +FAV LQ L+ + ++ V TQP RP G R V ++A++ +
Sbjct: 1 MT-KVVFLGTPDFAVPVLQTLIRDGYEVIGVVTQPDRPVG-RKQVLTPPPVKREAEKHGI 58
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P KL + E + L+ DV V AYG ++P+ +L+A G N HASLLP RG
Sbjct: 59 PVFQPEKLREPESLARILALKPDVVVTCAYGQILPKALLDAPPFGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G +TG+ IM M + LD G + R+V I + L +LS A +
Sbjct: 119 APIHTAILQGKKKTGVTIMYMAEKLDAGDIFSQREVEIEETDDAGTLHDKLSKAGAVLLS 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + K+ + PQ E T+A I++ + ++++ + E ++N IR L P+P A+ +
Sbjct: 179 ETLPKILAKEVTPVPQDEQKATFAHNITRSQEKIDWKKPGEVIYNQIRGLCPWPVAYTVL 238
Query: 240 MIGNKHERIKLLESQ--LVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLD 293
+ K+ +S+ + + +PG ++ +A ++I LQ AG + +
Sbjct: 239 GG----KTFKIWKSEKVPLSEQAEPGTIVTIEKDGIVVATGSTTGIKITELQPAGKKRMA 294
Query: 294 IGDFLLGC--PVIIGCIVG 310
+ FL G + G G
Sbjct: 295 VAQFLNGSAGGLAPGMKFG 313
>gi|256820318|ref|YP_003141597.1| methionyl-tRNA formyltransferase [Capnocytophaga ochracea DSM 7271]
gi|256581901|gb|ACU93036.1| methionyl-tRNA formyltransferase [Capnocytophaga ochracea DSM 7271]
Length = 316
Score = 187 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 90/313 (28%), Positives = 154/313 (49%), Gaps = 6/313 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VFMGT +FA+A+L+ALV + +++V V T +P+G RG K S V A+ +P
Sbjct: 5 KMRIVFMGTPDFALASLKALVENHYNVVGVVTVADKPSG-RGQKLHQSPVKLYAESKGIP 63
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P KL E + L +V ++P+ + K G +N HASLLP +RGAAP
Sbjct: 64 VLQPIKLKDETFVNALKALQPDLQIVVAFRMLPEVVWRLPKYGTFNLHASLLPNYRGAAP 123
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ ETG+ +D+ +DTG + PI S+ L +L V A +++
Sbjct: 124 INWAIINGEKETGVTTFFIDEKIDTGAIIAQEVTPIESHETAGTLHDKLMVQGAELVLKT 183
Query: 182 MDKLEQNNLPLSPQIENGIT-YAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + + PQ + A KI K ++++ + +R +SP+P AW +
Sbjct: 184 VDSIAEGTCTTQPQNKEVTFAEAPKIYKETCKIDWQAEGMTIERLVRGMSPYPTAWTAFV 243
Query: 241 IGNKHERIKLLES--QLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ ++ + V + GE++ +A G ++++ LQ + + D
Sbjct: 244 QKGEVLNVKVYDAIFEPVSHQYSIGELLVGKKGLRVAVKDGYIQLLELQLPAKKRMKTND 303
Query: 297 FLLGCPVIIGCIV 309
L G I+
Sbjct: 304 LLNGFSFDNTTIL 316
>gi|324327764|gb|ADY23024.1| methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 314
Score = 187 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 104/313 (33%), Positives = 161/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + ++ V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLRIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E V + G ++ F +A V+I LQ +G + + F
Sbjct: 240 -GQVVKVWWGEKVPVTKSAEAGTIVAIEEDGFVVATGNETGVKITELQPSGKKRMSCEQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|170718225|ref|YP_001785247.1| methionyl-tRNA formyltransferase [Haemophilus somnus 2336]
gi|189044516|sp|B0UWZ4|FMT_HAES2 RecName: Full=Methionyl-tRNA formyltransferase
gi|168826354|gb|ACA31725.1| methionyl-tRNA formyltransferase [Haemophilus somnus 2336]
Length = 317
Score = 187 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 177/316 (56%), Gaps = 9/316 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL+ S H++++VYTQP +PAG RG SAV A++ +P
Sbjct: 3 PLNIIFAGTPDFAAQHLQALLQSQHNVLAVYTQPDKPAG-RGQTLRASAVKILAEKHHIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L + E ++ LS DV VVVAYGL++P +L LG N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKVEVQEHLSKLNADVMVVVAYGLILPLAVLQTFPLGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD +TG+ IM+M++ LDTG + I+ + L +L+ + A++E
Sbjct: 122 PIQRAIWAGDKKTGVTIMQMNEGLDTGDMLHKVCCDITPTETSTSLYTKLANIAPKALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D LEQ Q E+ YAEK+SK E ++++ SAE + IRA +P+P ++
Sbjct: 182 VLDGLEQGLFKAEVQDESLSNYAEKLSKEEAKLDWSLSAEQLERCIRAFNPWPMSYFVTQ 241
Query: 241 I-GNKHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++ + KP G ++ +A + G + + +LQ AG + +
Sbjct: 242 DSQGTLQTLKVYQASVLPHQNKPCGTILAADKRGIQVATANGVLNLEQLQPAGKKPMSAR 301
Query: 296 DFLLGCP--VIIGCIV 309
D L IG ++
Sbjct: 302 DLLNSRADWFKIGQVL 317
>gi|114045539|ref|YP_736089.1| methionyl-tRNA formyltransferase [Shewanella sp. MR-7]
gi|123327057|sp|Q0I0S3|FMT_SHESR RecName: Full=Methionyl-tRNA formyltransferase
gi|113886981|gb|ABI41032.1| methionyl-tRNA formyltransferase [Shewanella sp. MR-7]
Length = 318
Score = 187 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 176/304 (57%), Gaps = 11/304 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL++S H++++VYTQP RPAG RG K S V + A +P
Sbjct: 3 PLNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAG-RGKKLTASPVKELAVSHDIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q L+ D+ VVVAYGL++P+ +L+ +LG N H S+LPRWRGAA
Sbjct: 62 VYQPGSLRKEPAQQELAALNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ IM+MD LDTG + +PI + +A L ++L+ A+++
Sbjct: 122 PIQRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSATLYEKLAQQGPDALLQ 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ L L Q E YAEK+SK E R+++ +SA + +RA +P+P ++ E
Sbjct: 182 ALEGLANGTLTAEKQDEALANYAEKLSKEEARLDWSKSATQLWQEVRAFNPWPVSYFE-- 239
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++ IK+ ++Q+ PG +I +A G + ++ +Q G + L +
Sbjct: 240 --HQGNTIKVWQTQISTTSSNAAPGTIISASKKGIEVATGDGVLTLLSMQLPGKKPLSVA 297
Query: 296 DFLL 299
D L
Sbjct: 298 DILN 301
>gi|313905222|ref|ZP_07838590.1| methionyl-tRNA formyltransferase [Eubacterium cellulosolvens 6]
gi|313469975|gb|EFR65309.1| methionyl-tRNA formyltransferase [Eubacterium cellulosolvens 6]
Length = 314
Score = 187 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 105/318 (33%), Positives = 168/318 (52%), Gaps = 15/318 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV+MGT +FAV TL+A++++ H +V V TQ +P G R + +AV A +LP
Sbjct: 1 MRVVYMGTPDFAVGTLEAILAAGHEVVGVVTQQDKPVG-RKQELKPTAVKACALAHNLPV 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ +V VV AYG +IP+ +L K G N HASLLP++RGAA
Sbjct: 60 YQPAKVRNNPEFFETLKELAPEVIVVAAYGQIIPKEVLELPKYGCLNVHASLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ G+ ++G+ IM+M++ LDTG + ++ + + L L+ A +VE
Sbjct: 120 PIQWAVIDGEEKSGVTIMQMNEGLDTGDMIAKTELTLDAEETGGSLFDRLAEAGAKLLVE 179
Query: 181 AMDKLEQNNLPLSPQI-ENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ K+EQ ++ PQ E+ YA I+K + R+++ SA + +R L+P+P A+ +
Sbjct: 180 TLVKVEQGDIHPEPQPAESTTPYARMITKNDGRIDWNSSAVAIERLVRGLNPWPSAFTSL 239
Query: 240 MIGNKHERIKLLESQLVEGE----GKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVL 292
+K+ +SQ+V PG V+ + G +RI LQ G + +
Sbjct: 240 NGKG----LKIWKSQVVTENTGQEKAPGCVLAAGAEGLDVQTGDGVLRITELQLEGKKRM 295
Query: 293 DIGDFLLGCPVIIGCIVG 310
GDFL G + G + G
Sbjct: 296 AAGDFLRGHGIPAGTVFG 313
>gi|157151389|ref|YP_001449913.1| methionyl-tRNA formyltransferase [Streptococcus gordonii str.
Challis substr. CH1]
gi|189044552|sp|A8AVV3|FMT_STRGC RecName: Full=Methionyl-tRNA formyltransferase
gi|157076183|gb|ABV10866.1| methionyl-tRNA formyltransferase [Streptococcus gordonii str.
Challis substr. CH1]
Length = 311
Score = 187 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 91/316 (28%), Positives = 158/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ S + +++V TQP R G R + ++ V + A +
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLESDQYEVLAVVTQPDRAVG-RKKEIRITPVKEVALSYG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + +V L A N HASLLP+ RG
Sbjct: 59 LPIYQPEKLSGSPEMEAIMNLGADGIVTVAFGQFLPSKLLARMNFVVNVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD ETG+ IM+ K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDKETGVTIMETVKEMDAGDMISRRSIPITDEDNVGTLFEKLAIVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ Q + +T++ I E R+++ + + N IR ++P+P A
Sbjct: 179 DTLPAYLSGDIQPEAQDPSQVTFSPNIRPEEERLDWNMTNRQLFNQIRGMNPWPVAHT-- 236
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER K+ E++L +GEG+PGE++ +A +GA+ + +Q AG + I D
Sbjct: 237 --LWQGERFKIYEAELADGEGQPGEILEIGKRQLLVATGEGALVLKTVQPAGKPKMTISD 294
Query: 297 FLLGC--PVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGAGRNLAVGDKFG 310
>gi|260892751|ref|YP_003238848.1| methionyl-tRNA formyltransferase [Ammonifex degensii KC4]
gi|260864892|gb|ACX51998.1| methionyl-tRNA formyltransferase [Ammonifex degensii KC4]
Length = 311
Score = 187 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 107/315 (33%), Positives = 164/315 (52%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FA+ +L+AL+ + H +V V TQP RP G RG K V + A P
Sbjct: 1 MRLVFMGTPDFAIPSLEALIRAGHKLVLVVTQPDRPKG-RGGKLTPPPVKEWALRHGFPC 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L PT+ + VVVAYG ++P +LN + G N HASLLP++RGAAP
Sbjct: 60 LQPTRLKDPAFLATLREAKPEAIVVVAYGKILPPEVLNLSPRGCINLHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++AG+ ETG+ M MD+ +DTG + + + N L L+ L A +
Sbjct: 120 IQHALIAGERETGVTTMLMDEGMDTGDILLQESLVVGEEENFGSLHDRLAQLGAELLCRT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ E+ + PQ + TYA + + + + AE + N +RAL P PGA
Sbjct: 180 LSLWEEGKIKPQPQDHSQATYAPPLRSEDEIIRWEEPAEKIKNLVRALDPVPGARTF--- 236
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + +K+ ++ + G G PGEV+ + +GA+ ++ LQ AGG+ L +
Sbjct: 237 -WQGKVLKIWRARALTGPFGGVPGEVLALDPEGIVVRAGRGALLVLELQLAGGKRLKASE 295
Query: 297 FLLGCP-VIIGCIVG 310
FL G P + G ++G
Sbjct: 296 FLRGHPNLQPGTVLG 310
>gi|254473691|ref|ZP_05087086.1| methionyl-tRNA formyltransferase [Pseudovibrio sp. JE062]
gi|211957077|gb|EEA92282.1| methionyl-tRNA formyltransferase [Pseudovibrio sp. JE062]
Length = 314
Score = 187 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 152/313 (48%), Positives = 205/313 (65%), Gaps = 6/313 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+LRV+FMGT +F+V TL +V +V+ Y+QPPR AG RG++ + VH+ A+ +
Sbjct: 1 MSLRVIFMGTPDFSVPTLIEIVGQGWDVVACYSQPPRKAG-RGMELKKTPVHEAAESLGI 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P PT +EE E+F SF ADVAVVVAYGL++P+ IL T+ G NGHASLLPRWRGA
Sbjct: 60 PVFTPTSLKSEEEQERFRSFEADVAVVVAYGLLLPKAILEGTEYGCLNGHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API RAIMAGD +GI +M+M++ LDTGPV V I+ ++ L LS L M+
Sbjct: 120 APINRAIMAGDKASGIQVMQMEEGLDTGPVCMSETVAITEDMTAGELHDRLSGLGGDLML 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
A+ L + L +PQ E+G+TYA+KI K ETR+++ AE VHNHIR LSPFPGAW EM
Sbjct: 180 RALSALSRGGLGSTPQSEDGVTYAKKIQKSETRIDWSLPAEQVHNHIRGLSPFPGAWCEM 239
Query: 240 MIGNKH-ERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+G K ER+K+L S L EG G GEV+ T+AC GA++++++QRAG + +
Sbjct: 240 ELGGKSAERVKILRSSLAEGSGTAGEVLVAEESTLTVACGSGAIKLVQVQRAGKKAMSTD 299
Query: 296 DFLLGCPVIIGCI 308
+FL G + G
Sbjct: 300 EFLRGSKLSAGDK 312
>gi|229157442|ref|ZP_04285520.1| Methionyl-tRNA formyltransferase [Bacillus cereus ATCC 4342]
gi|228626169|gb|EEK82918.1| Methionyl-tRNA formyltransferase [Bacillus cereus ATCC 4342]
Length = 314
Score = 187 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 104/313 (33%), Positives = 162/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + ++ V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ D+ V A+G +IP IL A K G N HASLLP RG AP
Sbjct: 61 LQPLRIREKDEYEKVLALEPDLIVTAAFGQIIPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E V+ + G ++ F +A V++ LQ +G + + F
Sbjct: 240 -GQVVKVWWGEKVPVKKSAEAGTIVAIEEDGFVVATGNETGVKVTELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|83589749|ref|YP_429758.1| methionyl-tRNA formyltransferase [Moorella thermoacetica ATCC
39073]
gi|123766805|sp|Q2RK24|FMT_MOOTA RecName: Full=Methionyl-tRNA formyltransferase
gi|83572663|gb|ABC19215.1| methionyl-tRNA formyltransferase [Moorella thermoacetica ATCC
39073]
Length = 311
Score = 187 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 107/314 (34%), Positives = 169/314 (53%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV +LQALV++ H +V TQP RP G RG K + V A LP
Sbjct: 1 MRLVFMGTPDFAVPSLQALVAAGHEFAAVITQPDRPRG-RGKKLLPPPVKSTALAAGLPV 59
Query: 63 LVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P+ + E+ + L ++ VVVA+G ++ + IL+ G N HASLLPR+RGAAP
Sbjct: 60 RQPSDMKDREFLEDLRLLQPELIVVVAFGRILSREILDLPARGCVNLHASLLPRYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RA+M G+ ETG+ M M LD G + K+PI T + L+ + A +V
Sbjct: 120 IHRAVMNGEVETGVTTMWMAPQLDAGDIILQEKLPIPPEATTGEIHDRLAEVGAGLLVHT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ + + P PQ E TYA + E +++ + A+ ++N IR L+P+PGA+
Sbjct: 180 LELIAASRAPRLPQDEALATYAPPLKPEEEVIHWEQPAQVIYNQIRGLNPWPGAYT---- 235
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
ER+K+ ++L + G+ G V+ F + G + + +Q G +++
Sbjct: 236 LRSGERLKIYGARLTDPSAIGRAGRVVEVGREGFVVQAGTGRLLVTSVQPPGKKIMPASA 295
Query: 297 FLLGCPVIIGCIVG 310
+L G P++ G I+G
Sbjct: 296 YLQGYPMVPGEILG 309
>gi|313113576|ref|ZP_07799164.1| methionyl-tRNA formyltransferase [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310624091|gb|EFQ07458.1| methionyl-tRNA formyltransferase [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 306
Score = 187 bits (473), Expect = 3e-45, Method: Composition-based stats.
Identities = 100/310 (32%), Positives = 164/310 (52%), Gaps = 7/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT + A L+AL ++ H I +VYT+ +P G R V + A P
Sbjct: 1 MRILFMGTPDIAAECLKALYAAGHDICAVYTRRDKPVG-RKQVLTAPPVKEVALAHGTPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E E + ++ VVVAYG ++P+ +L A K G N H SLLP++RG+AP
Sbjct: 60 FQPRTLRDGSEDENIRALAPELIVVVAYGCILPKSVLEAPKYGCINLHVSLLPKYRGSAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A++ GD ETG++IM+MD+ LDTG V K+ I + L ++ + A + E
Sbjct: 120 VQWAVLNGDAETGVSIMQMDEGLDTGDVLCCEKIAIDPEETSGQLFDRVTAVGARVLCEV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + L PQ A ++K SA ++HN +R ++P+PGAW +
Sbjct: 180 VPAIAAGTLKPQPQDHENACLAPMLNKEMAEFRLTESAAHIHNWVRGMNPWPGAWF---V 236
Query: 242 GNKHERIKLLESQLVEGEGK-PGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +++K++E + VE G+ PG V+ T+AC +GAV+++ + G + +D F
Sbjct: 237 TSGGKKLKVMECRAVEAHGEAPGTVLATKPLTVACGEGAVQLLNVVPEGKKPMDGTAFAA 296
Query: 300 GCPVIIGCIV 309
G + G I+
Sbjct: 297 GQRLKTGDIL 306
>gi|1772500|emb|CAA71350.1| Met-tRNAi formyl transferase [Bacillus subtilis subsp. subtilis
str. 168]
Length = 317
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 98/315 (31%), Positives = 157/315 (49%), Gaps = 9/315 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT R+VFMGT +F+V L+ L+ + +V V TQP RP G R V ++A +
Sbjct: 1 MT-RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKG-RKKVLTPPPVKEEALRHGI 58
Query: 61 PALVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P K+ E + + + D+ V A+G ++P+ +L++ K G N HASLLP RG
Sbjct: 59 PVLQPEKVRLTEEIEKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +I+ G +TGI IM M + LD G + +V I N L +LSV A +
Sbjct: 119 APIHYSILQGKKKTGITIMYMVEKLDAGDMISKVEVDIEETDNVGTLHDKLSVAGAKLLS 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + ++ Q E TYA I + + +++ R+ E ++N IR L+P+P A+ +
Sbjct: 179 ETVPNVIAGSISPEKQDEEKATYAPNIKREQELLDWSRTGEELYNQIRGLNPWPVAYTTL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLDIG 295
+ +E +PG V+ +A + A+ + LQ G + +
Sbjct: 239 --NGQKLENMGVEKNSGTNNSEPGTVVAVEKEGIIVATGNETALLLTELQPGGKKRMKGE 296
Query: 296 DFLLGCPVIIGCIVG 310
DF+ G V G ++G
Sbjct: 297 DFVRGAHVEAGDVLG 311
>gi|197334146|ref|YP_002157327.1| methionyl-tRNA formyltransferase [Vibrio fischeri MJ11]
gi|238690283|sp|B5FCW7|FMT_VIBFM RecName: Full=Methionyl-tRNA formyltransferase
gi|197315636|gb|ACH65083.1| methionyl-tRNA formyltransferase [Vibrio fischeri MJ11]
Length = 315
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 111/316 (35%), Positives = 173/316 (54%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT +FA L AL+ S H ++ VYTQP RPAG RG K S V + A E ++P
Sbjct: 4 PLRIIFAGTPDFAARHLSALIDSHHEVIGVYTQPDRPAG-RGKKLTASPVKELALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VFQPENFKSDEAKQELADQNADLMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI + +A + +L+ L A+V+
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYDKLAELGPVALVD 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + Q + YA+K+SK E ++++ A + +RA +P+P + +
Sbjct: 183 CLSDIADGSAIAQKQDDELANYAKKLSKEEAKIDWTMDAIAIERCVRAFNPWPMSHFSVE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S++ G+ PG +I +A A+ +LQ G + + +
Sbjct: 243 D----KAIKVWQSRVESYTGDATPGTIIQADKTGIYVATGSDAIVFEQLQVPGKKAMGVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G +
Sbjct: 299 DILNSRKEWFEVGNTL 314
>gi|257438996|ref|ZP_05614751.1| methionyl-tRNA formyltransferase [Faecalibacterium prausnitzii
A2-165]
gi|257198581|gb|EEU96865.1| methionyl-tRNA formyltransferase [Faecalibacterium prausnitzii
A2-165]
Length = 306
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 99/310 (31%), Positives = 161/310 (51%), Gaps = 7/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT + A L+AL ++ H I VYT+ +P G R V + A E P
Sbjct: 1 MRILFMGTPDIAAECLKALYAAGHEICGVYTRRDKPVG-RKQVLTAPPVKEVALEHGTPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E + D+ VVVAYG ++P+ +L A K G N H SLLP++RG+AP
Sbjct: 60 FQPRTLRDGSEDANIRALAPDLIVVVAYGCILPKSVLEAPKYGCINLHVSLLPKYRGSAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A++ GD ETG++IM+MD+ LDTG V K+ I + L ++ + A + EA
Sbjct: 120 VQWAVLNGDTETGVSIMQMDEGLDTGDVLVCEKIAIGPEETSGELFDRVTAVGARVLCEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E L PQ T A + K +A ++HN +R ++P+P AW +
Sbjct: 180 VPAMEAGTLKPQPQQHENATLAPMLDKELAEFRLTDTAAHIHNWVRGMNPWPMAWF---V 236
Query: 242 GNKHERIKLLESQLVEGEGK-PGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+++K+ E ++ G+ PG V++ T+AC+ GAV+++ + G + +D F
Sbjct: 237 TAGGKKVKVTECRVAASNGEAPGTVLSTKPLTVACADGAVQLLHVVPEGKKPMDGTSFAA 296
Query: 300 GCPVIIGCIV 309
G + G +
Sbjct: 297 GLRLKAGDTL 306
>gi|16124534|ref|NP_419098.1| methionyl-tRNA formyltransferase [Caulobacter crescentus CB15]
gi|221233220|ref|YP_002515656.1| methionyl-tRNA formyltransferase [Caulobacter crescentus NA1000]
gi|21542056|sp|Q9ABE9|FMT_CAUCR RecName: Full=Methionyl-tRNA formyltransferase
gi|254789345|sp|B8GYF1|FMT_CAUCN RecName: Full=Methionyl-tRNA formyltransferase
gi|13421416|gb|AAK22266.1| methionyl-tRNA formyltransferase [Caulobacter crescentus CB15]
gi|220962392|gb|ACL93748.1| methionyl-tRNA formyltransferase [Caulobacter crescentus NA1000]
Length = 308
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 127/308 (41%), Positives = 182/308 (59%), Gaps = 2/308 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ F+GT +FAV L LV+S H IV VY+QPP P G RG S VH A+ LP
Sbjct: 1 MRIAFLGTPDFAVTCLAELVASGHEIVCVYSQPPAPRG-RGQDLKPSPVHAFAEGLGLPV 59
Query: 63 LVPTKLGQEEYEQ-FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + E F + + D AVVVA+G ++ + +L A K G +N HASLLPRWRGAAP
Sbjct: 60 RTPVSMKTPEEIAAFQALDLDAAVVVAFGQILVKDVLEAPKHGCFNLHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD TG+ +M+M + LD GP+ ++V I+ + A L +L+ + A + A
Sbjct: 120 IQRAIMAGDAVTGVQVMRMSEGLDEGPILMSQQVAIADDDTAASLHDKLAAVGARLLPVA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ + +PQ E+G+TYA+KI E R+++ R A + HIR LSPFPGAW E
Sbjct: 180 LAAIEREVVQETPQAEDGVTYAKKIKSAEARIDWTRPAAEIDRHIRGLSPFPGAWFEAPS 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
R+K L S++ G G ++ IAC +G++R+++ QR G V D F G
Sbjct: 240 EKGPVRVKALLSRVEAASGVAGTTLDDALLIACGEGSIRLLKAQREGKGVQDAQTFTRGF 299
Query: 302 PVIIGCIV 309
P+ G ++
Sbjct: 300 PIATGTVL 307
>gi|227115519|ref|ZP_03829175.1| methionyl-tRNA formyltransferase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 315
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 119/316 (37%), Positives = 178/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+SS H +V V+TQP RPAG RG K S V A++ S+P
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHEVVGVFTQPDRPAG-RGNKLTPSPVKVLAEQQSIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E + NADV VVVAYGL++PQ +L+ +LG N H SLLP WRGAA
Sbjct: 63 VFQPKSLRPEENQAMVQALNADVMVVVAYGLILPQPVLSMPRLGCINVHGSLLPLWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD+ETG+ IM+MD LDTG + PI + +A L +L+ L ++E
Sbjct: 123 PIQRALWAGDSETGVTIMQMDVGLDTGAMLHKISCPILAQDTSATLYDKLAELGPRGLLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+++L + Q + TYAEK+SK E R+++ SA+ + IRA +P+P ++ +
Sbjct: 183 TLEQLADGSAVAETQNDALATYAEKLSKEEARLDWLLSAKQLERCIRAFNPWPVSYFIV- 241
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ +++ + +PG +I IA + G + I LQ AG +V+
Sbjct: 242 ---DEQPVKVWKAEAIAKAHGSQPGTIIQADKQGIQIATADGILNIQELQPAGKKVMGAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G +
Sbjct: 299 DLLNSRREWFVPGNTL 314
>gi|292489814|ref|YP_003532704.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)N-formyltransferase
[Erwinia amylovora CFBP1430]
gi|292900856|ref|YP_003540225.1| methionyl-tRNA formyltransferase [Erwinia amylovora ATCC 49946]
gi|291200704|emb|CBJ47837.1| methionyl-tRNA formyltransferase [Erwinia amylovora ATCC 49946]
gi|291555251|emb|CBA23522.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)N-formyltransferase
[Erwinia amylovora CFBP1430]
gi|312173997|emb|CBX82250.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)N-formyltransferase
[Erwinia amylovora ATCC BAA-2158]
Length = 315
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 113/316 (35%), Positives = 178/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+L ++F GT +FA L AL+SS H +V V+TQP RPAG RG K S V + A++ +P
Sbjct: 4 SLNIIFAGTPDFAARHLDALLSSGHRVVGVFTQPDRPAG-RGNKLTASPVKQLAEQHHIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P+ +E ++ + NADV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPSSLRPEENQQRVAALNADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + PI + +A L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDIGLDTGDMLHKLACPIDATDTSATLYDKLADLGPAGLIS 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + Q E ++YA+K+SK E+R+++ SA + IRA +P+P ++ +
Sbjct: 183 TLAQLADGSAQPQVQDEAKVSYADKLSKEESRLDWSLSAAQLERCIRAFNPWPVSYFVI- 241
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++ +PGEV+ + + G + I LQ AG + +
Sbjct: 242 ---DEQPVKVWKASVLPAVSGRQPGEVLQADKQGIQVVTADGVLNIEELQPAGKKAMKAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G I+
Sbjct: 299 DLLNSRREWFTPGNII 314
>gi|323496959|ref|ZP_08101987.1| methionyl-tRNA formyltransferase [Vibrio sinaloensis DSM 21326]
gi|323318033|gb|EGA71016.1| methionyl-tRNA formyltransferase [Vibrio sinaloensis DSM 21326]
Length = 315
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 114/316 (36%), Positives = 176/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 PLKIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKNIALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDEAKQELADLNADIMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI + +A + ++L+ L A++E
Sbjct: 123 PIQRSIWAGDKETGVTIMQMDIGLDTGDMLKIATLPIEATDTSATMYEKLAELGPDALIE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q Q + YA+K+SK E R+N+ A ++ +RA +P+P + E
Sbjct: 183 CLTDIAQGKAVPEKQDDELANYAKKLSKEEARINWADDAAHIERCVRAFNPWPMSHFEAA 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S++ E + G ++ +A G + + +LQ G + + +
Sbjct: 243 ENS----IKVWQSRVDEQTSDKPAGTILQADKTGIYVATGNGVLVLEQLQVPGKKAMSVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G +
Sbjct: 299 DILNSRASWFEVGTQL 314
>gi|268611640|ref|ZP_06145367.1| methionyl-tRNA formyltransferase [Ruminococcus flavefaciens FD-1]
Length = 313
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 98/318 (30%), Positives = 161/318 (50%), Gaps = 18/318 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMG+ EF+V L+ L S H + +V+TQP + GRRG + V +AV A E+
Sbjct: 1 MKIVFMGSPEFSVPCLKVLAESKHEVAAVFTQPDKARGRRGNQLVPTAVKAAALEYGYQV 60
Query: 63 LVP-----TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
P + + + D+ VV AYG ++P+ +L K G N HASLLP++R
Sbjct: 61 YQPLSLRKGEDAETSMQVLRDIAPDLIVVTAYGQILPKEVLELPKYGCINIHASLLPKYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI I+ G+ ETG+ M+M + LDTG + R I N L L+V+
Sbjct: 121 GAAPINWVILNGETETGVTSMQMGEGLDTGDMLIKRSTKIGENETYEELYARLAVMGGEV 180
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ E ++ +E L Q ++ Y+ I K + ++F ++A VHN IR ++ F
Sbjct: 181 LAETLEAVENGTLSPEKQDDSLSCYSPMIQKEMSALDFSKTAAEVHNTIRGVTGF----- 235
Query: 238 EMMIGNKHERIKLLESQLVEG---EGKPGEVIN-PNFTIACSQG-AVRIMRLQRAGGRVL 292
+R+K+ S++ + + + G +++ F + C G AV +Q G + +
Sbjct: 236 ---TMLDGKRLKVFRSEISDNIAPDAENGSIVDEKRFAVKCGDGKAVVFTEVQPEGKKRM 292
Query: 293 DIGDFLLGCPVIIGCIVG 310
DFL G ++ G I+G
Sbjct: 293 AAEDFLRGKKLVKGEILG 310
>gi|238754204|ref|ZP_04615562.1| Methionyl-tRNA formyltransferase [Yersinia ruckeri ATCC 29473]
gi|238707700|gb|EEQ00060.1| Methionyl-tRNA formyltransferase [Yersinia ruckeri ATCC 29473]
Length = 315
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 113/316 (35%), Positives = 173/316 (54%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT +FA L AL +S H +V V+TQP RPAG RG K S V A++ +P
Sbjct: 4 SLRVIFAGTPDFAARHLDALTASRHQVVGVFTQPDRPAG-RGNKLTPSPVKILAEQHHIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE + ++ D+ VVVAYGL++P+ +L +LG N H SLLPRWRGAA
Sbjct: 63 VFQPKSLRPEENQHLVADLNADIMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETGI IM+MD LDTG + I +A L +L+ L M+
Sbjct: 123 PIQRSLWAGDKETGITIMQMDVGLDTGDMLHKIACQIQPEDTSASLYSKLAELGPQGMLT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q E +TYAEK+SK E ++++ SA+ + IRA +P+P ++ +
Sbjct: 183 TLQQLAVGQAKPEVQDEQLVTYAEKLSKEEAKLDWSLSAQQLERCIRAFNPWPVSYFVI- 241
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++Q++ + +PG ++ + + G + I +LQ AG + +
Sbjct: 242 ---DEQPVKVWQAQVLPAVEDVQPGTIVQADKQGIQVGTADGMLNITQLQPAGKKSMSAA 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G +
Sbjct: 299 DLLNSRREWFTVGNQL 314
>gi|148259427|ref|YP_001233554.1| methionyl-tRNA formyltransferase [Acidiphilium cryptum JF-5]
gi|166214867|sp|A5FVK3|FMT_ACICJ RecName: Full=Methionyl-tRNA formyltransferase
gi|146401108|gb|ABQ29635.1| formyltetrahydrofolate deformylase [Acidiphilium cryptum JF-5]
Length = 301
Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 123/310 (39%), Positives = 175/310 (56%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ FMG+ FAV L+AL ++ H IV+VY QPPRP G RG + VH+ A+ L
Sbjct: 1 MRLAFMGSPGFAVPALRALHAAGHDIVAVYCQPPRPVG-RGHRIHKCPVHEAAEALGLTV 59
Query: 63 LVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +L +++ F + + D AVV AYG ++P +L A + G N HASLLPRWRGAA
Sbjct: 60 RTPERLRRDDAERAYFRALDLDAAVVAAYGQILPADMLVAPRRGCINIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+AGD +TG+ IM+MD+ LDTG VPI L L+ L A +++
Sbjct: 120 PIHAAILAGDAQTGVTIMQMDEGLDTGATLLAEAVPIGPEDTMVDLLDRLADLGAALVIK 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D N P PQ E G+TYA K+SK + +++ SA + IRA P+PG +
Sbjct: 180 VLDG----NFPPVPQPEGGVTYAPKLSKADAEIDWSASAAVILRRIRAFRPWPGTETRL- 234
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
E +K++ ++ G+G+PG V++ IAC A+R +QRAG + FL G
Sbjct: 235 ---DGEALKIIRAEPAAGQGEPGTVLDDRLAIACGDAAIRPTLVQRAGRAAMQAEAFLRG 291
Query: 301 CPVIIGCIVG 310
PV IG +G
Sbjct: 292 HPVAIGTRLG 301
>gi|126728527|ref|ZP_01744343.1| methionyl-tRNA formyltransferase [Sagittula stellata E-37]
gi|126711492|gb|EBA10542.1| methionyl-tRNA formyltransferase [Sagittula stellata E-37]
Length = 303
Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 141/309 (45%), Positives = 183/309 (59%), Gaps = 8/309 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT EF+V L ALV + H +V VY QPPRPAG RG K + VH +A E LP
Sbjct: 1 MRLVFMGTPEFSVPVLDALVEAGHDVVGVYCQPPRPAG-RGKKDRPTPVHARAVELGLPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E E F A+VAVVVAYGL++PQ +L+A + G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKSAEAQEAFAELGAEVAVVVAYGLILPQAVLDAPERGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAI+AGD +TG+ IM+M+ LDTGPV + PI+S L LS++ + +VEA
Sbjct: 120 IHRAILAGDADTGVCIMQMEAGLDTGPVLLRKATPIASGETAGQLHDRLSLIGSALIVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D+L L PQ E G+TYA KI K E +++ A ++ I LSPFPGAW +
Sbjct: 180 LDRL--PELVPVPQPEEGVTYASKIDKAEAAIDWSGDAASIVRQINGLSPFPGAWTTLNG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
R+KLL + G+ G ++ FT+AC GA+R+ QRAG D FL G
Sbjct: 238 D----RVKLLAALPAPGQAPAGTTLDDRFTVACGTGALRVTEAQRAGRSAQDAETFLRGL 293
Query: 302 PVIIGCIVG 310
P+ G G
Sbjct: 294 PLPKGTAFG 302
>gi|59713151|ref|YP_205927.1| methionyl-tRNA formyltransferase [Vibrio fischeri ES114]
gi|73919426|sp|Q5E1Q7|FMT_VIBF1 RecName: Full=Methionyl-tRNA formyltransferase
gi|59481252|gb|AAW87039.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Vibrio fischeri ES114]
Length = 315
Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 112/316 (35%), Positives = 174/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT +FA L AL+ S H ++ VYTQP RPAG RG K S V + A E ++P
Sbjct: 4 PLRIIFAGTPDFAARHLSALIDSHHEVIGVYTQPDRPAG-RGKKLTASPVKELALEHNIP 62
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q + NAD+ VVVAYGL++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VFQPENFKSDEAKQELVDQNADLMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI + +A + +L+ L A+V+
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYDKLAELGPVALVD 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + Q + YA+K+SK E ++++ A + +RA +P+P + +
Sbjct: 183 CLSDIADGSAIAQKQDDELANYAKKLSKEEAKIDWTMDAIAIERCVRAFNPWPMSHFSVE 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S++ G+ PG +I +A A+ +LQ G + + +
Sbjct: 243 D----KAIKVWQSRVESYTGDATPGTIIQADKTGIYVATGSDAIVFEQLQVPGKKAMGVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G +
Sbjct: 299 DILNSRKEWFEVGNTL 314
>gi|325697708|gb|EGD39593.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK160]
Length = 311
Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 90/314 (28%), Positives = 158/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +F+ L+ L+ S + +++V TQP R G R + ++ V + A E+ LP
Sbjct: 2 MKIIFMGTPDFSATVLKGLLDSGQYEVLAVVTQPDRAVG-RKREIRMTPVKELALEYKLP 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL Q + L +V A L + N HASLLP++RG AP
Sbjct: 61 VYQPEKLAQSSDLEELMNLEADGIVTAAFGQFLPSRLLDSVDFAVNVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ GD +TG+ IM+M K +D G + + PI N L ++L+++ +++
Sbjct: 121 IHYALINGDKQTGVTIMEMVKEMDAGDMIASKATPIEETDNVGTLFEKLAIIGRDLLLDV 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + PQ + +T++ IS E R+++ ++ + N IR + P+P A +
Sbjct: 181 LPAYRAGQIIPQPQDPSQVTFSPNISPEEERIDWSKTNRQIFNQIRGMYPWPVAHTLLQG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R K+ E+ + G G+PG+++ +A QGA+ + +Q AG + I DFL
Sbjct: 241 ----QRFKIYEADMAAGSGQPGQILSISKKELVVAAGQGALSLKTVQPAGKPKMAIVDFL 296
Query: 299 L--GCPVIIGCIVG 310
G + +G G
Sbjct: 297 NGLGRSLSVGDTFG 310
>gi|77464455|ref|YP_353959.1| methionyl-tRNA formyltransferase [Rhodobacter sphaeroides 2.4.1]
gi|123591068|sp|Q3IZH6|FMT_RHOS4 RecName: Full=Methionyl-tRNA formyltransferase
gi|77388873|gb|ABA80058.1| methionyl-tRNA formyltransferase [Rhodobacter sphaeroides 2.4.1]
Length = 302
Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 141/307 (45%), Positives = 184/307 (59%), Gaps = 10/307 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMG+ +F+V L+AL + H +V VY QPPRPAG RG K + V +A+E LP
Sbjct: 1 MRLIFMGSPDFSVPVLEALH-AHHEVVCVYCQPPRPAG-RGKKDRPTPVQTRAEELGLPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
PT E +F + A+ AVVVAYGL++PQ IL+A + G N HASLLPRWRGAAP
Sbjct: 59 RHPTSLRTPEAQAEFAALGAEAAVVVAYGLILPQPILDAPERGCLNIHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAI+AGD ETGI IM+M+ LDTGPV K I L LS + A ++ A
Sbjct: 119 IHRAILAGDEETGICIMQMEAGLDTGPVLMCEKTHIGPEETVQDLHDRLSDMGARLILGA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++L PQ + G+TYAEKI+K E +++ R A + IR LSPFPGAW +
Sbjct: 179 L--GALDDLVPCPQPDAGVTYAEKIAKAEAGIDWTRPATEIDRQIRGLSPFPGAWTLL-- 234
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KLL +L EG G PG V+ TIAC GAV I QR G R ++ +FL G
Sbjct: 235 --NGERVKLLRCRLAEGHGAPGAVL-GGLTIACGTGAVEITLAQREGKRPMEPEEFLRGF 291
Query: 302 PVIIGCI 308
P+ G
Sbjct: 292 PLPEGSR 298
>gi|113460189|ref|YP_718246.1| methionyl-tRNA formyltransferase [Haemophilus somnus 129PT]
gi|123131909|sp|Q0I182|FMT_HAES1 RecName: Full=Methionyl-tRNA formyltransferase
gi|112822232|gb|ABI24321.1| methionyl-tRNA formyltransferase [Haemophilus somnus 129PT]
Length = 317
Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 178/316 (56%), Gaps = 9/316 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL+ S H++++VYTQP +PAG RG SAV A++ +P
Sbjct: 3 PLNIIFAGTPDFAAQHLQALLQSQHNVLAVYTQPDKPAG-RGQTLRASAVKILAEKHHIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L + E ++ LS DV VVVAYGL++P +L LG N H SLLPRWRGAA
Sbjct: 62 VYQPKSLRKVEVQENLSKLNADVMVVVAYGLILPLAVLQTFPLGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD +TG+ IM+M++ LDTG + I+ + L +L+ + A++E
Sbjct: 122 PIQRAIWAGDKKTGVTIMQMNEGLDTGDMLHKVCCDITPTETSTSLYTKLANIAPKALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D LEQ+ Q E+ YAEK+SK E ++++ SAE + IRA +P+P ++
Sbjct: 182 VLDGLEQSLFKAEVQDESLSNYAEKLSKEEAKLDWSLSAEQLERCIRAFNPWPMSYFVTQ 241
Query: 241 I-GNKHERIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++ + KP G ++ +A + G + + +LQ AG + +
Sbjct: 242 DSQGTLQTLKVYQASVLPHQDKPCGTILAADKRGIQVATANGVLNLEQLQPAGKKPMSAR 301
Query: 296 DFLLGCP--VIIGCIV 309
D L IG ++
Sbjct: 302 DLLNSRADWFKIGQVL 317
>gi|308047744|ref|YP_003911310.1| methionyl-tRNA formyltransferase [Ferrimonas balearica DSM 9799]
gi|307629934|gb|ADN74236.1| methionyl-tRNA formyltransferase [Ferrimonas balearica DSM 9799]
Length = 314
Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 113/316 (35%), Positives = 167/316 (52%), Gaps = 10/316 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT L++VF GT +FA L AL+ S H +V+VYTQP RPAG RG K S V + A +
Sbjct: 1 MTALKIVFAGTPDFAAQHLAALLDSHHQVVAVYTQPDRPAG-RGKKLTASPVKQLALQHD 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP P E + + + D+ VVVAYGL++P+ +L +LG N H SLLPRWRG
Sbjct: 60 LPVYQPQSLRKAEAQAELSAIDFDLMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQRAI AGD ETG+ IM+MD+ LDTG + +PI +A L +L+ L A+
Sbjct: 120 AAPIQRAIWAGDAETGVTIMQMDEGLDTGAMLHKAALPIEDTDTSASLYTKLAELGPKAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++A+ L Q + YAEK+SK E V++ +SA + RA P+P + +
Sbjct: 180 LDALTPLADGTAVAEVQDDTLANYAEKLSKEEAAVDWSKSALALWRECRAFDPWPVSHFQ 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + ++ + + + PG +I +A G + + LQ G + + +
Sbjct: 240 VA--EQTIKLWACDVLEQQHDAAPGTIIGADKQGIRVATGDGVLNLTNLQLPGKKAMAVA 297
Query: 296 DFLLGCP--VIIGCIV 309
D L +G +
Sbjct: 298 DILNARKEWFEVGTQL 313
>gi|163733888|ref|ZP_02141330.1| methionyl-tRNA formyltransferase, putative [Roseobacter litoralis
Och 149]
gi|161392999|gb|EDQ17326.1| methionyl-tRNA formyltransferase, putative [Roseobacter litoralis
Och 149]
Length = 305
Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 142/308 (46%), Positives = 182/308 (59%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +F+V L+ALV++ H I VY+QPPRPAG RG K S V +A+ LP
Sbjct: 1 MRLVFMGTPDFSVPVLEALVAAGHEIACVYSQPPRPAG-RGKKDRPSPVQARAEALGLPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L EE + A+VAVVVAYGL++PQ IL A G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLRSEEALADFAGLEAEVAVVVAYGLILPQAILYAPTRGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD +TG+ IM+M+ LDTGPV V I TA L LS L A +V+
Sbjct: 120 IHRAIMAGDAQTGVCIMQMEAGLDTGPVLARETVDIGPEETTAQLHDRLSALGAVCIVDT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L+ L PQ E+ + YA KI K E +V++ + AE+V IR LSPFPGAW +
Sbjct: 180 LARLD--QLEAVPQTEDSVIYAAKIDKAEAQVDWEQPAEDVDRLIRGLSPFPGAWTLLGD 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
R+KLL S++ E G PG V + C GAV + ++QRAG DFL G
Sbjct: 238 T----RVKLLGSRISEASGVPGTVRLNPLRVVCGTGAVELTQVQRAGKAAQSAADFLNGS 293
Query: 302 PVIIGCIV 309
+ G +
Sbjct: 294 AIEDGTLF 301
>gi|238921410|ref|YP_002934925.1| methionyl-tRNA formyltransferase, [Edwardsiella ictaluri 93-146]
gi|259646030|sp|C5BF18|FMT_EDWI9 RecName: Full=Methionyl-tRNA formyltransferase
gi|238870979|gb|ACR70690.1| methionyl-tRNA formyltransferase, putative [Edwardsiella ictaluri
93-146]
Length = 315
Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 114/316 (36%), Positives = 178/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L+AL++S H IV V+TQP RP+G RG K S V A + LP
Sbjct: 4 SLRIIFAGTPDFAARHLEALLASDHQIVGVFTQPDRPSG-RGNKLTPSPVKALALQHDLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE ++ ++ DV VVVAYGL++PQ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPASLRPEENQRLVASLQADVMVVVAYGLILPQAVLDMPRLGCVNVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD+ETG+ IM+MD LDTG + I+ + +A L +LS L ++
Sbjct: 123 PIQRALWAGDSETGVTIMQMDAGLDTGDMLLKLSCLITQDDTSATLYDKLSALGPQGLLT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q + YAEK+SK E R+++ AE + +RA +P+P ++ +
Sbjct: 183 TLAQLADGRAQAQQQDDALACYAEKLSKEEARLDWQLPAEQLARCVRAFNPWPVSFFMLE 242
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ + ++ E + +PG ++ +A +QG + + +LQ AG + +
Sbjct: 243 G----QPVKVWGANVLHQESDAQPGTIVGADKQGIAVATAQGILLLTQLQPAGKKSMAAR 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G ++
Sbjct: 299 DLLNSRKESFLAGTLL 314
>gi|222151047|ref|YP_002560201.1| methionyl-tRNA formyltransferase [Macrococcus caseolyticus
JCSC5402]
gi|254789359|sp|B9EB94|FMT_MACCJ RecName: Full=Methionyl-tRNA formyltransferase
gi|222120170|dbj|BAH17505.1| methionyl-tRNA formyltransferase [Macrococcus caseolyticus
JCSC5402]
Length = 310
Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 110/314 (35%), Positives = 168/314 (53%), Gaps = 12/314 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ +++FMGT +F+ L+AL + H + V TQP +P G R V A+ +
Sbjct: 1 MS-KIIFMGTPDFSAPILKALHEA-HGVSLVITQPDKPVG-RKRVLTPPPVKVMAESLGI 57
Query: 61 PALVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + +E +E+ + + D+ V A+G ++P+R+L+ +LG N HASLLP++RG
Sbjct: 58 EVYQPESMKSDEAFERVHALSPDLIVTAAFGQILPERVLDIPRLGCINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ +G+ IM M K LD G + +VPI N L +LSV ++
Sbjct: 118 APIHKAIINGEKYSGVTIMYMVKRLDAGDMIDSVQVPIEINDTVGTLHDKLSVAGTDLLL 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E M + +PQ ++ T+A +S+ E V F R+A VHNHIR LSP+P A+
Sbjct: 178 EVMPSVLSGTNNRTPQNDSEATFASNVSREEEYVTFDRTALEVHNHIRGLSPWPVAFANF 237
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +KL S++ EG G PGE+I IA + GAVRI LQ AG + +D
Sbjct: 238 ----DGKAMKLWASEIAEGSGAPGEIIQADKAGLVIATNDGAVRITSLQPAGKKRMDAAS 293
Query: 297 FLLGCPVI-IGCIV 309
F+ G +G
Sbjct: 294 FVAGAKSQLVGMKF 307
>gi|315497921|ref|YP_004086725.1| methionyl-tRNA formyltransferase [Asticcacaulis excentricus CB 48]
gi|315415933|gb|ADU12574.1| methionyl-tRNA formyltransferase [Asticcacaulis excentricus CB 48]
Length = 309
Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 120/311 (38%), Positives = 176/311 (56%), Gaps = 5/311 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ FMGT +FAV L LV++ H +V VY+QPP P G RG S VH A L
Sbjct: 1 MRLAFMGTPDFAVKALAELVAAGHEVVCVYSQPPAPKG-RGQVLTPSPVHAFADSLGLLV 59
Query: 63 LVPTKLGQEEYE-QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + +F + + D A+VVAYG ++ + +L LG +N HASLLPRWRGAAP
Sbjct: 60 RTPKSMKSPDAIAEFQALDIDAAIVVAYGQILKREVLEHPLLGCFNLHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD TG+ +M+M + LD GPV +V I + L +L+ L A + A
Sbjct: 120 IQRAIMAGDTHTGVQVMRMSEGLDEGPVILSGRVEIGAQDTAQTLHDKLAGLGASLLPVA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E++ PQ+ A+KI+ E R+++ RSA + HIR LSPFPGAW +
Sbjct: 180 LAAIERSQPEGEPQVGEVTY-AKKITSEEARIDWSRSARELDWHIRGLSPFPGAWTTLTT 238
Query: 242 GNKHERIKLLESQLVEG--EGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+R+K+L S++ E + PG +I P +A G + ++R+QR G + +FL
Sbjct: 239 PKGEQRLKVLMSRVDEAVTDAGPGTLIGPGLRLATGDGVIELLRVQREGKAAQEAAEFLN 298
Query: 300 GCPVIIGCIVG 310
G + +G +G
Sbjct: 299 GVGLSVGDRLG 309
>gi|325695222|gb|EGD37123.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK150]
Length = 311
Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 157/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +F+ L+ L+ S + +++V TQP R G R + ++ V + A E+ LP
Sbjct: 2 MKIIFMGTPDFSATVLKGLLDSGQYEVLAVVTQPDRAVG-RKREIRMTPVKELALEYKLP 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL Q + L +V A L + N HASLLP++RG AP
Sbjct: 61 VYQPEKLAQSSDLEELMNLEADGIVTAAFGQFLPSRLLDSVDFAVNVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ GD + G+ IM+M K +D G + + PI N L ++L+++ +++
Sbjct: 121 IHYALINGDKQAGVTIMEMVKEMDAGDMIASKATPIEETDNVGTLFEKLAIIGRDLLLDV 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + PQ + +T++ IS E R+++ ++ + N IR + P+P A +
Sbjct: 181 LPAYRAGQIIPQPQDPSQVTFSPNISPEEERIDWSKTNRQIFNQIRGMYPWPVAHTLLQG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R K+ E+ + G G+PG+++ +A QGA+ + +Q AG + I DFL
Sbjct: 241 ----QRFKIYEADMAAGSGQPGQILSISKKELVVAAGQGALSLKTVQPAGKPKMAIVDFL 296
Query: 299 L--GCPVIIGCIVG 310
G + +G G
Sbjct: 297 NGLGRSLSVGDTFG 310
>gi|85373240|ref|YP_457302.1| methionyl-tRNA formyltransferase [Erythrobacter litoralis HTCC2594]
gi|84786323|gb|ABC62505.1| methionyl-tRNA formyltransferase [Erythrobacter litoralis HTCC2594]
Length = 296
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 138/303 (45%), Positives = 181/303 (59%), Gaps = 9/303 (2%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +FAV TL+AL ++ H +V+ YTQPPRPAG RG K S V K A+E + PT
Sbjct: 1 MGTPDFAVPTLRALHAAGHEVVAAYTQPPRPAG-RGKKLQPSPVQKAAEELGIEVRSPTS 59
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
+E E F + NADVAVV AYGL++PQ IL+A K G N HAS+LPRWRGAAPI RAI
Sbjct: 60 LKKADEQEAFAAINADVAVVAAYGLILPQPILDAPKHGCLNVHASILPRWRGAAPIHRAI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
MAGD TG+ IM+M+ LDTGP+ + PI+ ++ + + E
Sbjct: 120 MAGDAVTGVTIMQMEAGLDTGPMLATIRTPINDKTTGELTEELAELGANLMVQTL---RE 176
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ Q TYA KI K E R+++ + AE V HI L+PFPGAW E+ E
Sbjct: 177 LDKHVPIAQDNAEATYAPKIDKAEARIDWAKPAEEVVRHIHGLAPFPGAWCEIEG----E 232
Query: 247 RIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIG 306
R+KLL +++ EG GEV++ FTIAC A+R +RLQRAG +D+ DFL G V G
Sbjct: 233 RVKLLRAEMAGDEGAAGEVLDDQFTIACGTDAIRPLRLQRAGKPAMDLDDFLRGKAVAKG 292
Query: 307 CIV 309
++
Sbjct: 293 TVL 295
>gi|218233113|ref|YP_002368667.1| methionyl-tRNA formyltransferase [Bacillus cereus B4264]
gi|228954143|ref|ZP_04116171.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229047553|ref|ZP_04193143.1| Methionyl-tRNA formyltransferase [Bacillus cereus AH676]
gi|229071364|ref|ZP_04204587.1| Methionyl-tRNA formyltransferase [Bacillus cereus F65185]
gi|229081121|ref|ZP_04213631.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock4-2]
gi|229129142|ref|ZP_04258115.1| Methionyl-tRNA formyltransferase [Bacillus cereus BDRD-Cer4]
gi|229152065|ref|ZP_04280260.1| Methionyl-tRNA formyltransferase [Bacillus cereus m1550]
gi|229192035|ref|ZP_04319005.1| Methionyl-tRNA formyltransferase [Bacillus cereus ATCC 10876]
gi|296504361|ref|YP_003666061.1| methionyl-tRNA formyltransferase [Bacillus thuringiensis BMB171]
gi|226704289|sp|B7HDY9|FMT_BACC4 RecName: Full=Methionyl-tRNA formyltransferase
gi|218161070|gb|ACK61062.1| methionyl-tRNA formyltransferase [Bacillus cereus B4264]
gi|228591586|gb|EEK49435.1| Methionyl-tRNA formyltransferase [Bacillus cereus ATCC 10876]
gi|228631414|gb|EEK88048.1| Methionyl-tRNA formyltransferase [Bacillus cereus m1550]
gi|228654379|gb|EEL10244.1| Methionyl-tRNA formyltransferase [Bacillus cereus BDRD-Cer4]
gi|228702165|gb|EEL54641.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock4-2]
gi|228711818|gb|EEL63770.1| Methionyl-tRNA formyltransferase [Bacillus cereus F65185]
gi|228723800|gb|EEL75155.1| Methionyl-tRNA formyltransferase [Bacillus cereus AH676]
gi|228805463|gb|EEM52054.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|296325413|gb|ADH08341.1| methionyl-tRNA formyltransferase [Bacillus thuringiensis BMB171]
Length = 314
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 105/313 (33%), Positives = 162/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + +V V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYEVVGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E + + G ++ F +A S V+I LQ +G + + F
Sbjct: 240 -GQVVKVWWGEKVPITEPAEAGTIVAIEEDGFVVATSNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|330993400|ref|ZP_08317335.1| Methionyl-tRNA formyltransferase [Gluconacetobacter sp. SXCC-1]
gi|329759430|gb|EGG75939.1| Methionyl-tRNA formyltransferase [Gluconacetobacter sp. SXCC-1]
Length = 306
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 120/308 (38%), Positives = 176/308 (57%), Gaps = 13/308 (4%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP-- 65
MGT +FAV L+AL + H IV+VY+QPPRPAG RG K S V + A+E + P
Sbjct: 1 MGTPDFAVPALRALHQAGHDIVTVYSQPPRPAG-RGKKLRPSPVQQAAEELGIAVRTPLS 59
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
+ EE+ F + + D AVV AYGL++P +L A + G N HASLLPRWRGAAPIQ A
Sbjct: 60 LRRNAEEHAHFRNLDLDAAVVAAYGLILPVDMLEAPRRGCLNIHASLLPRWRGAAPIQAA 119
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
I+AGD+E+G+ IM+MD LDTG + V ++ L +L A ++ L
Sbjct: 120 ILAGDSESGVTIMQMDAGLDTGAMLLRDHVALTPRTTATTLHDDL---AAMGGRLIVEAL 176
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKH 245
Q P +PQ + G+TY +++S+ + R+++ A + IRAL+P+PG + +
Sbjct: 177 RQPPHPGTPQPDTGVTYVQRLSREDGRIDWRTPATTIDRQIRALTPWPGTFTVLDGT--- 233
Query: 246 ERIKLLESQLVEG--EGKPGEVINPNFTIACSQGAV-RIMRLQRAGGRVLDIGDFLLGCP 302
IK+ +++ G PG V++ +AC G + RI RLQR G +++ GDFL G
Sbjct: 234 -VIKIGAAEIAPGGTPAAPGTVMDDRLHVACGDGTILRITRLQRPGRGMMEAGDFLRGQA 292
Query: 303 VIIGCIVG 310
+ G +G
Sbjct: 293 IAPGTRLG 300
>gi|289677567|ref|ZP_06498457.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. syringae
FF5]
Length = 298
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 119/300 (39%), Positives = 175/300 (58%), Gaps = 9/300 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S H IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSPHQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHDVP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P + + D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VMQPPTLRDPAAQAELAALQPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD E+G+ +M+M+ LDTGP+ PI++ L L+ L A+++
Sbjct: 123 PIQRAVQAGDAESGVTVMRMEAGLDTGPMLLKAVTPITAQDTGGTLHDRLAELGPPAVLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L +L Q ++ YA K++K E R+++ R A+ + +RA +P+P +
Sbjct: 183 AIAGLADGSLVGEVQDDSLANYAHKLNKDEARLDWTRPADELERLVRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+L + L EG+G PG ++ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 242 ---NEETLKVLAADLAEGQGAPGTILGASKDGLIVACGQNALRLTRLQLPGGKPLNFTDL 298
>gi|117918493|ref|YP_867685.1| methionyl-tRNA formyltransferase [Shewanella sp. ANA-3]
gi|166215513|sp|A0KR60|FMT_SHESA RecName: Full=Methionyl-tRNA formyltransferase
gi|117610825|gb|ABK46279.1| methionyl-tRNA formyltransferase [Shewanella sp. ANA-3]
Length = 318
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 111/302 (36%), Positives = 171/302 (56%), Gaps = 7/302 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL++S H++++VYTQP RPAG RG K S V + A +P
Sbjct: 3 PLNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAG-RGKKLTASPVKELAVSHDIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q L+ D+ VVVAYGL++P+ +L+ +LG N H S+LPRWRGAA
Sbjct: 62 VYQPGSLRKEPAQQELAALNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ IM+MD LDTG + +PI + +A L ++L++ A+++
Sbjct: 122 PIQRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSATLYEKLALQGPDALLQ 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ L L Q E YAEK+SK E R+++ +SA + +RA +P+P ++ E
Sbjct: 182 ALEGLANGTLTAEKQDEVLANYAEKLSKEEARLDWRKSATQLWQEVRAFNPWPVSYFE-- 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ + PG +I +A G + ++ +Q G + L + D
Sbjct: 240 HQGNTIKVWQTQVSTTSSNAAPGTIISASKKGIEVATGDGVLTLLSMQLPGKKPLSVADI 299
Query: 298 LL 299
L
Sbjct: 300 LN 301
>gi|75762656|ref|ZP_00742498.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218899019|ref|YP_002447430.1| methionyl-tRNA formyltransferase [Bacillus cereus G9842]
gi|228940954|ref|ZP_04103513.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228973883|ref|ZP_04134459.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980473|ref|ZP_04140783.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis Bt407]
gi|226704288|sp|B7IUM5|FMT_BACC2 RecName: Full=Methionyl-tRNA formyltransferase
gi|74489855|gb|EAO53229.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218544653|gb|ACK97047.1| methionyl-tRNA formyltransferase [Bacillus cereus G9842]
gi|228779293|gb|EEM27550.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis Bt407]
gi|228785908|gb|EEM33911.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818790|gb|EEM64856.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326941635|gb|AEA17531.1| methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 314
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 106/313 (33%), Positives = 162/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + +V V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYEVVGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E V + G ++ F +A S V+I LQ +G + + F
Sbjct: 240 -GQVVKVWWGEKVPVTEPAEAGTIVAIEEDGFVVATSNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|253997549|ref|YP_003049613.1| methionyl-tRNA formyltransferase [Methylotenera mobilis JLW8]
gi|253984228|gb|ACT49086.1| methionyl-tRNA formyltransferase [Methylotenera mobilis JLW8]
Length = 313
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 122/316 (38%), Positives = 170/316 (53%), Gaps = 13/316 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT +FAV L AL+ + H +V V TQP RPAG RG+K S + A+++ L
Sbjct: 1 MKIIFAGTPDFAVPALAALIEAGHDVVMVLTQPDRPAG-RGMKLKASPIKVLAEQYGLFV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + +ADV +V AYGL+IP +L K G YN HASLLPRWRGAAP
Sbjct: 60 FQPETLKDATVQAEIAETHADVMIVAAYGLIIPTVVLQMPKHGCYNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I R+I+AGDNETG+ IM++ LD G + VPI+ T GL L+ + A MVEA
Sbjct: 120 IHRSILAGDNETGVTIMEVVPALDAGAMVSKGVVPITETDTTQGLHDALAAIGADLMVEA 179
Query: 182 MDK-LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
M + L PQ E +TYA K+ K E +++ +SA + +RA +PFP A +
Sbjct: 180 MHVLTQTGRLASVPQDELLVTYAHKLEKAEAVIDWQKSAAEISRQVRAFNPFPVAQSFL- 238
Query: 241 IGNKHERIKLLESQLVEG---EGKPGEVIN--PNFTIACSQ-GAVRIMRLQRAGGRVLDI 294
E +L + V+G PG V++ +AC G +RI LQ GG+ L
Sbjct: 239 ---HGEVCRLWMATTVDGMSSSAAPGSVLDVHDGILVACGDGGVLRISELQAPGGKRLSA 295
Query: 295 GDFLLGCPVIIGCIVG 310
F+LG + G G
Sbjct: 296 SVFMLGHALKAGDQFG 311
>gi|295109187|emb|CBL23140.1| methionyl-tRNA formyltransferase [Ruminococcus obeum A2-162]
Length = 315
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 91/315 (28%), Positives = 160/315 (50%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++V+MGT +FAV L ALV + + I +V TQP +P G RG + + V ++A + +P
Sbjct: 1 MKIVYMGTPDFAVPPLAALVKNGYEIAAVVTQPDKPKG-RGKTLLPTPVKEEAMKHEIPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ E+ + L D+ +V A+G +IP+ IL+ K G N HASLLP++RGAAP
Sbjct: 60 YQPLKVRDPEFVETLKELAPDMIIVAAFGQIIPKTILDMPKYGCLNIHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ+A++ G+ E+G+ IMKM LDTG + V ++ + L +L+ A ++
Sbjct: 120 IQQAVIDGEKESGVTIMKMGVGLDTGDMISQAVVTLAEDETGGSLFDKLAEEGAELLIRT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETR-VNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + Q E T + + ++F +SA + +R L+P+P A+ +
Sbjct: 180 IPSIVDGTAVYTKQPEESPTPYAAMISKKMGLMDFTKSAAELERLVRGLNPWPSAYTFL- 238
Query: 241 IGNKHERIKLLESQLVEGE---GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +K+ + + G PG + +AC + + +Q G + ++
Sbjct: 239 ---NGKTLKVWKCSVESGNCGKETPGTITSVDKKGIHVACGTDKLILEEVQLEGKKRMEA 295
Query: 295 GDFLLGCPVIIGCIV 309
FL G V G ++
Sbjct: 296 DAFLRGYQVTEGTML 310
>gi|228987009|ref|ZP_04147135.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228772787|gb|EEM21227.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 314
Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats.
Identities = 104/313 (33%), Positives = 161/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + ++ V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ D+ V A+G +IP IL A K G N HASLLP RG AP
Sbjct: 61 LQPLRIREKDEYEKVLALEPDLIVTAAFGQIIPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E V + G ++ F +A V++ LQ +G + + F
Sbjct: 240 -GQVVKVWWGEKVPVTKSAEAGTIVAIEEDGFVVATGNETGVKVTELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|324991976|gb|EGC23898.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK405]
Length = 313
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 91/317 (28%), Positives = 159/317 (50%), Gaps = 12/317 (3%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M + +++FMGT +F+ L+ L+ S + +++V TQP R G R + ++ V + A E+
Sbjct: 1 MKMMKIIFMGTPDFSATVLKGLLDSGQYEVLAVVTQPDRAVG-RKREIRMTPVKELALEY 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP P KL Q + L +V A L + N HASLLP++RG
Sbjct: 60 KLPVYQPEKLAQSSDLEELMNLEADGIVTAAFGQFLPSRLLDSVDFAVNVHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API A++ GD + G+ IM+M K +D G + + PI N L ++L+++ +
Sbjct: 120 GAPIHYALINGDEQAGVTIMEMVKEMDAGDMIASKATPIEETDNVGTLFEKLAIIGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + + PQ + +T++ IS E R+++ ++ + N IR + P+P A
Sbjct: 180 LDVLPAYRAGQIIPQPQDPSQVTFSPNISPEEERIDWSKTNRQIFNQIRGMYPWPVAHTL 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +R K+ E+ +V G G+PG+++ +A QGA+ + +Q AG + I
Sbjct: 240 LQG----QRFKIYEADMVAGSGQPGQILSISKKELVVAAGQGALSLKTVQPAGKPKMAIV 295
Query: 296 DFLL--GCPVIIGCIVG 310
DFL G + +G G
Sbjct: 296 DFLNGLGRSLSLGDTFG 312
>gi|47569493|ref|ZP_00240173.1| methionyl-tRNA formyltransferase [Bacillus cereus G9241]
gi|206976708|ref|ZP_03237612.1| methionyl-tRNA formyltransferase [Bacillus cereus H3081.97]
gi|217961286|ref|YP_002339854.1| methionyl-tRNA formyltransferase [Bacillus cereus AH187]
gi|222097311|ref|YP_002531368.1| methionyl-tRNA formyltransferase [Bacillus cereus Q1]
gi|229140512|ref|ZP_04269067.1| Methionyl-tRNA formyltransferase [Bacillus cereus BDRD-ST26]
gi|226704290|sp|B7HLJ9|FMT_BACC7 RecName: Full=Methionyl-tRNA formyltransferase
gi|254789337|sp|B9IVF5|FMT_BACCQ RecName: Full=Methionyl-tRNA formyltransferase
gi|47553822|gb|EAL12193.1| methionyl-tRNA formyltransferase [Bacillus cereus G9241]
gi|206745018|gb|EDZ56421.1| methionyl-tRNA formyltransferase [Bacillus cereus H3081.97]
gi|217065113|gb|ACJ79363.1| methionyl-tRNA formyltransferase [Bacillus cereus AH187]
gi|221241369|gb|ACM14079.1| methionyl-tRNA formyltransferase [Bacillus cereus Q1]
gi|228643073|gb|EEK99349.1| Methionyl-tRNA formyltransferase [Bacillus cereus BDRD-ST26]
Length = 314
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 103/313 (32%), Positives = 161/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + ++ V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLRIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E V + G ++ F +A V++ LQ +G + + F
Sbjct: 240 -GQVVKVWWGEKVPVTKSAEAGTIVAIEEDGFVVATGNETGVKVTELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|170755463|ref|YP_001782052.1| methionyl-tRNA formyltransferase [Clostridium botulinum B1 str.
Okra]
gi|169120675|gb|ACA44511.1| methionyl-tRNA formyltransferase [Clostridium botulinum B1 str.
Okra]
Length = 313
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 89/318 (27%), Positives = 167/318 (52%), Gaps = 16/318 (5%)
Query: 3 LR---VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
++ +VFMGT +FAV + + L+ ++ +V+TQP RP G RG K +SAV + A + +
Sbjct: 1 MKDTTIVFMGTPDFAVPSFKKLIE-EFNVKAVFTQPDRPKG-RGKKLAMSAVKEVALQNN 58
Query: 60 LPALVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+ P K + ++ + D +VVA+G ++ + +L+ K G N HASLLP++R
Sbjct: 59 IEVYQPIKLKNDEICIKKLKEISPDFIIVVAFGQILSKEVLDIPKYGCINLHASLLPKYR 118
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI AI+ G+NE+G M MD+ LDTG + V I ++ L L +
Sbjct: 119 GAAPINWAIIKGENESGNTTMLMDEGLDTGDMLLKNTVKIEDDMTFGELHDILMESGSEL 178
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+V+ + L++ + Q I YA ++K ++++ ++++ ++ IR L+P P A+
Sbjct: 179 LVDTIKGLKEGTIEREKQKSGNIIYASMLNKQMGKIDWNKTSKEINLLIRGLNPRPVAYT 238
Query: 238 EMMIGNKHERIKLLESQLVE--GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVL 292
+ +E +K+ S +++ PG ++ +A G + I +Q G + +
Sbjct: 239 QYK----NETMKIYNSSILKESSNKTPGTILKVSKEGIKVATGDGILSITTVQFPGKKPM 294
Query: 293 DIGDFLLGCPVIIGCIVG 310
+ +++ G + G ++G
Sbjct: 295 KVEEYIKGHTIEEGLVLG 312
>gi|313681058|ref|YP_004058797.1| methionyl-tRNA formyltransferase [Oceanithermus profundus DSM
14977]
gi|313153773|gb|ADR37624.1| methionyl-tRNA formyltransferase [Oceanithermus profundus DSM
14977]
Length = 308
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 106/315 (33%), Positives = 169/315 (53%), Gaps = 14/315 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R+ F G+ +AV L+AL + H +V V TQP +P G RGLK+ S V + A+ L
Sbjct: 1 MRRRLAFFGSPAWAVPVLEALARA-HDVVLVVTQPDKPKG-RGLKTQPSPVAQAAERLGL 58
Query: 61 PALVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ P + E E+ + + D AVV AYG +IP+ +L + GF N H SLLP++RG
Sbjct: 59 EVVKPRRLRRDPEIAERLRALDLDAAVVAAYGQIIPEALLQIPRYGFLNIHPSLLPKYRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+ A++ G+ ETG++IM++D +DTGPV + PI L + L +
Sbjct: 119 AAPVNWALIHGEPETGVSIMRLDAGMDTGPVFVQERTPIGPGETAVELSERLRDRGVALL 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ +++LE PQ A + K + R+ + A V++ R + P+PG+W E
Sbjct: 179 LDVLERLETARPE--PQTGEPSY-APLLGKEDGRIRWNEPARKVYDRHRGVQPWPGSWFE 235
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +R+K+LE + V+G G+PGEV+ +A +GAV ++ +Q G R +
Sbjct: 236 ----HGGKRVKVLEMRPVDGRGRPGEVLEVGPEGVRVATGEGAVELITVQPEGKRPMPAA 291
Query: 296 DFLLGCPVIIGCIVG 310
D+ G V G +G
Sbjct: 292 DWARGHGVAPGVRLG 306
>gi|260437317|ref|ZP_05791133.1| methionyl-tRNA formyltransferase [Butyrivibrio crossotus DSM 2876]
gi|292810229|gb|EFF69434.1| methionyl-tRNA formyltransferase [Butyrivibrio crossotus DSM 2876]
Length = 306
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 107/312 (34%), Positives = 173/312 (55%), Gaps = 11/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +FAV+TL+A++ + H + +V TQP + G RG + +S V KA E ++
Sbjct: 1 MKVVFMGTPDFAVSTLEAIIQAGHEVAAVITQPDKQKG-RGKEISMSPVKVKALEHNIEV 59
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E + + DV VVVAYG ++ + IL K G N HASLLP++RGAAP
Sbjct: 60 FQPLKVRNPEFVDILKKISPDVIVVVAYGQILSKEILELPKYGCVNVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ E G+ IM+MD+ LDTG + + K+ ++ + L +L+ L A +V
Sbjct: 120 IQWAVIDGEKEAGVTIMQMDEGLDTGDMLKVAKIELAPDETGGSLFDKLADLGAGTLVST 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++E Q E TYA K+ K +++F + A + IR L+P+P A+
Sbjct: 180 LAEIENGTARAVKQ-EGISTYAGKLDKSLGKLDFTKDAITLERLIRGLNPWPSAYTVYNG 238
Query: 242 GNKHERIKLLESQLVEGEG-KPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+K+ ++ + E +G +PG + +F+IAC G ++++ LQ G + +D F
Sbjct: 239 R----TLKIWKAAVCECDGLEPGTIYDVTKKSFSIACGNGGIKVLELQLEGKKRMDTESF 294
Query: 298 LLGCPVIIGCIV 309
L G V G I+
Sbjct: 295 LRGTAVTEGMIL 306
>gi|49478422|ref|YP_037927.1| methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|73919375|sp|Q6HEU9|FMT_BACHK RecName: Full=Methionyl-tRNA formyltransferase
gi|49329978|gb|AAT60624.1| methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 314
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 104/313 (33%), Positives = 161/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + ++ V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVG-RKKVLTPTPVKVEAEKHDIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLRIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E V + G ++ F +A V+I LQ +G + + F
Sbjct: 240 -GQVVKVWWGEKVPVTKSAEAGTIVAIEEDGFVVATGNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|167747882|ref|ZP_02420009.1| hypothetical protein ANACAC_02611 [Anaerostipes caccae DSM 14662]
gi|167652704|gb|EDR96833.1| hypothetical protein ANACAC_02611 [Anaerostipes caccae DSM 14662]
Length = 320
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 111/315 (35%), Positives = 172/315 (54%), Gaps = 12/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ VVFMGT EFAV TL+ L H + + TQP + G RG K V + A + +P
Sbjct: 11 AMNVVFMGTPEFAVPTLEKLTQFHH-VAAAVTQPDKQKG-RGKKLSFPPVKEAALKHGIP 68
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K E++ + L DV VVVAYG ++P+RILN K G N H SLLP++RGA
Sbjct: 69 VLQPAKARDEQFIEDLEQLAPDVIVVVAYGQILPERILNIPKYGCINVHGSLLPKYRGAG 128
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ G+ ETGI M M+K LDTG + +P+ + L +L L A ++E
Sbjct: 129 PIQWAVLNGEKETGITTMYMEKGLDTGDMIDKAVIPLDQKETSGTLHDKLMELGADLLLE 188
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++KLE + Q +N +YA +SK + F +SA + +R L+P+P A+ E+
Sbjct: 189 TLEKLENGTAVRTKQNDNESSYAPMLSKEMGEIEFTKSAAEIEQWVRGLNPWPSAYTELG 248
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ +V +G+ +PG +I +AC Q A+ + +Q +G + + +
Sbjct: 249 G----KTLKIWDADIVSYDGDERPGTIIEVTKKQMIVACGQDALALNEIQLSGKKRMSVQ 304
Query: 296 DFLLGCPVIIGCIVG 310
FL G V G ++G
Sbjct: 305 AFLAGSRVDTGTVLG 319
>gi|197287100|ref|YP_002152972.1| methionyl-tRNA formyltransferase [Proteus mirabilis HI4320]
gi|227354904|ref|ZP_03839318.1| methionyl-tRNA formyltransferase [Proteus mirabilis ATCC 29906]
gi|238690086|sp|B4F1L6|FMT_PROMH RecName: Full=Methionyl-tRNA formyltransferase
gi|194684587|emb|CAR46443.1| methionyl-tRNA formyltransferase [Proteus mirabilis HI4320]
gi|227164986|gb|EEI49825.1| methionyl-tRNA formyltransferase [Proteus mirabilis ATCC 29906]
Length = 316
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 112/317 (35%), Positives = 178/317 (56%), Gaps = 14/317 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+S+ H IV V T P +PAG RG K ++ V + A ++P
Sbjct: 4 SLRIIFAGTPDFAARHLAALLSTQHHIVGVLTPPDKPAG-RGKKLTINPVKELALTNNIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
PT +E +E + DV +VVAYG+++P+ +L+ +LG N H SLLP+WRGAA
Sbjct: 63 VYQPTSLKPEENHEWIKALQPDVMIVVAYGMILPKAVLDIPRLGCLNVHGSLLPKWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ IM+MD LDTG + + PI+ +A L +L+ L A++
Sbjct: 123 PIQRALWAGDTETGVTIMQMDVGLDTGDMLYKASCPITHQDTSASLYAKLAELGPKALIN 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + L Q ++ YAEK+SK E ++N+ SA+ + IRA +P+P ++ +
Sbjct: 183 TLDLIISGELKAEKQDDSLANYAEKLSKEEAKINWSLSAQQIERCIRAFNPWPMSFFMLD 242
Query: 241 IGNKHERIKLLESQLVEGEGK---PGEVINP---NFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +K+ E+Q++ + PG ++ I +G + I +LQ +G + +
Sbjct: 243 D----QPVKVWEAQVIASDNTNQIPGTLLKADKTGIYIVTGEGILNITKLQPSGKKPMAS 298
Query: 295 GDFLLGCP--VIIGCIV 309
DFL G I+
Sbjct: 299 ADFLNSKRDWFTPGKII 315
>gi|327462452|gb|EGF08777.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK1057]
Length = 311
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 158/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +F+ L+ L+ S + +++V TQP R G R + ++ V + A E+ L
Sbjct: 2 MKIIFMGTPDFSATVLKGLLDSGQYEVLAVVTQPDRAVG-RKREIRMTPVKELALEYGLQ 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL Q + L +V A L + N HASLLP++RG AP
Sbjct: 61 VYQPEKLAQSSDLEELMNLEADGIVTAAFGQFLPSRLLDSVDFAVNVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ GD + G+ IM+M K +D G + + PI N L ++L+++ +++
Sbjct: 121 IHYALINGDEQAGVTIMEMVKEMDAGDMIASKATPIEETDNVGTLFEKLALIGRDLLLDV 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + PQ + +T++ IS E R+ + ++ + N IR + P+P A +
Sbjct: 181 LPAYRAGQIIPQPQDPSQVTFSPNISPEEERIEWSKTNRQIFNQIRGMYPWPVAHTLLQG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R K+ E+ +V+G+G+PG+++ +A +GA+ + +Q AG + I DFL
Sbjct: 241 ----QRFKIYEADMVDGDGQPGQILSISKKELVVAAGKGALSLKTVQPAGKPKMAIVDFL 296
Query: 299 L--GCPVIIGCIVG 310
G + IG G
Sbjct: 297 NGLGRSLSIGDTFG 310
>gi|150390545|ref|YP_001320594.1| methionyl-tRNA formyltransferase [Alkaliphilus metalliredigens
QYMF]
gi|166988360|sp|A6TRW7|FMT_ALKMQ RecName: Full=Methionyl-tRNA formyltransferase
gi|149950407|gb|ABR48935.1| methionyl-tRNA formyltransferase [Alkaliphilus metalliredigens
QYMF]
Length = 314
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 110/314 (35%), Positives = 175/314 (55%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV++MGT EFAVA L +L+ + + +V+V+TQP RP G RG K + V + A L
Sbjct: 1 MRVIYMGTPEFAVAPLHSLIGNQYDVVAVFTQPDRPKG-RGKKLQSTPVKELALAHGLML 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K E S DV VVVAYG ++ + IL G N HASLLP++RGAAP
Sbjct: 60 YQPIKLRESSVVEIIKSLEPDVIVVVAYGQILSKEILEIPTYGCINVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAI+ G+ +TG+ M MD LDTG + ++V I ++ L+ L L A +++
Sbjct: 120 IHRAIIDGEKKTGVTTMYMDVGLDTGDMLLKKEVLIGADETAGELRDRLMALGADTLIKT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++++++ L Q + +YA + KG ++N+ +SAE + N IR P+P A+ +
Sbjct: 180 LNQVQRGTLVGEKQNDLESSYAAMLDKGLGQINWNQSAEAIRNLIRGTIPWPMAYTTYLG 239
Query: 242 GNKHERIKLLESQLVEG--EGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R+K+ +S++ E GKPGE++ + QG + I R+Q +G + LD+ +
Sbjct: 240 N----RVKIWKSRIEESEVSGKPGEILKVEKSGIFVKTGQGTLVIERIQFSGKKPLDVRE 295
Query: 297 FLLGCPVIIGCIVG 310
+L G + G ++G
Sbjct: 296 YLAGNTIEKGVLLG 309
>gi|261346902|ref|ZP_05974546.1| methionyl-tRNA formyltransferase [Providencia rustigianii DSM 4541]
gi|282564969|gb|EFB70504.1| methionyl-tRNA formyltransferase [Providencia rustigianii DSM 4541]
Length = 315
Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats.
Identities = 108/304 (35%), Positives = 170/304 (55%), Gaps = 11/304 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+L+++F GT +FA L AL+ + H IV V T+ +PAG RG K S V A+E +P
Sbjct: 4 SLKIIFAGTPDFAAKHLAALLETKHQIVGVLTRHDKPAG-RGKKLTPSPVKILAEEHHIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + NAD+ +VVAYGL++PQ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 IFQPVTLKDPNNQQWIKEQNADLMIVVAYGLILPQAVLDIPRLGCLNVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETGI IM+MD LDTG + + PI+ +A L ++L++ A++
Sbjct: 123 PIQRSIWAGDHETGITIMQMDAGLDTGDMLYKATCPITPEDTSATLYEKLAITGPQALIH 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L Q + YAEK+SK E R+++ +SA+ + IRA +P+P ++ +
Sbjct: 183 TVNLLSIGKCTPEKQDDTLANYAEKLSKEEARIDWQQSAKQIERCIRAFNPWPMSYFMI- 241
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + IK+ ++++++ PG +I +A G + I +LQ G + +
Sbjct: 242 ---QEQLIKVWQAEVIDQVHNHLPGTIISADKKGICVATGMGILNITQLQPPGKKAMSAQ 298
Query: 296 DFLL 299
D L
Sbjct: 299 DILN 302
>gi|153809824|ref|ZP_01962492.1| hypothetical protein RUMOBE_00205 [Ruminococcus obeum ATCC 29174]
gi|149834002|gb|EDM89082.1| hypothetical protein RUMOBE_00205 [Ruminococcus obeum ATCC 29174]
Length = 315
Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats.
Identities = 92/312 (29%), Positives = 162/312 (51%), Gaps = 7/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++V+MGT +FAV L ALV + + + +V TQP +P G RG + + V ++A + +P
Sbjct: 1 MKIVYMGTPDFAVPPLAALVQNGYEVTAVVTQPDKPKG-RGKTLLPTPVKEEAMKHDIPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ + E+ + L D+ +V A+G +IP+ IL+ K G N HASLLP++RGAAP
Sbjct: 60 YQPLKVREPEFVETLKKLEPDMIIVAAFGQIIPKTILDMPKYGCLNIHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ+A++ G+ E+G+ IM+M LDTG + VP++ + L +L+ A ++
Sbjct: 120 IQQAVIDGEKESGVTIMQMGVGLDTGDMISQAVVPLAEDETGGSLFDKLAEEGAALLIRT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETR-VNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + Q E T + + ++F +SA + +R L+P+P A+ +
Sbjct: 180 IPSIVDGTAVYTKQPEESPTPYAAMISKKMGLMDFSKSAVELERLVRGLNPWPSAYTFL- 238
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
G + K + G+ PG +I +AC + + +Q G + ++ F
Sbjct: 239 NGKTLKVWKCAVERAECGKEAPGTIIGVDKSGIHVACGSDTLILKEVQLEGKKRMETDAF 298
Query: 298 LLGCPVIIGCIV 309
L G V G ++
Sbjct: 299 LRGYQVTAGTML 310
>gi|23098961|ref|NP_692427.1| methionyl-tRNA formyltransferase [Oceanobacillus iheyensis HTE831]
gi|33516868|sp|Q8ER25|FMT_OCEIH RecName: Full=Methionyl-tRNA formyltransferase
gi|22777189|dbj|BAC13462.1| methionyl-tRNA formyltransferase [Oceanobacillus iheyensis HTE831]
Length = 313
Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats.
Identities = 103/316 (32%), Positives = 156/316 (49%), Gaps = 10/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R+VFMGT +FAV LQ L+ + IV V TQP RP G R V ++A + L
Sbjct: 1 MK-RIVFMGTPDFAVPVLQKLLELKYDIVLVVTQPDRPKG-RKKVITPPPVKEEAIKHDL 58
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL +Y++ D+ V AYG ++P+ IL G N HASLLP RG A
Sbjct: 59 DIFQPEKLRD-DYKKITDLKPDLIVTAAYGQILPKEILEIPTFGCINVHASLLPELRGGA 117
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AIM G TG+ IM M + LD G + +VPI + + + +LS+ A+ + E
Sbjct: 118 PIHYAIMQGKEVTGVTIMYMAEKLDAGDILTQVEVPIEQDDHVGTMHDKLSLAGANLLSE 177
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L N + Q E+ +T+A I++ + R+++ ++A + N IR L P+P A+
Sbjct: 178 TLPSLFNNEITPKKQDESLVTFASNITREQERIDWSKTANEIINQIRGLHPWPVAFTTYE 237
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQG-AVRIMRLQRAGGRVLDIGD 296
+ E G GE+I F + C V++ +Q AG + + + D
Sbjct: 238 G-KVMKIWWGQELSKSSKSGNIGEIIEKDTDGFYVQCGNNTVVKVSEIQPAGKKRMLVED 296
Query: 297 FLLGC--PVIIGCIVG 310
+L G + IG +G
Sbjct: 297 YLKGSQDRIKIGIKLG 312
>gi|152989066|ref|YP_001345415.1| methionyl-tRNA formyltransferase [Pseudomonas aeruginosa PA7]
gi|166988368|sp|A6UX80|FMT_PSEA7 RecName: Full=Methionyl-tRNA formyltransferase
gi|150964224|gb|ABR86249.1| methionyl-tRNA formyltransferase [Pseudomonas aeruginosa PA7]
Length = 310
Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats.
Identities = 123/314 (39%), Positives = 180/314 (57%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L+AL+ + H +V+VYTQP RPAG RG K + SAV A E LP
Sbjct: 1 MRIVFAGTPEFAAEHLKALLDTPHQLVAVYTQPDRPAG-RGQKLMPSAVKSLALEHGLPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P L + + L+ D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAAP
Sbjct: 60 IQPPSLRSADAQAELAALRPDLMVVVAYGLILPQAVLDIPRLGCINSHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+ AGD ++G+ +M+M+ LDTGP+ PI+++ + L L+ L A+VEA
Sbjct: 120 IQRAVEAGDAQSGVTVMQMEAGLDTGPMLLKVATPIAADDSGGSLHDRLAALGPKAVVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L L Q + TYA K++K E R+++ R A + +RA +P+P +
Sbjct: 180 IAGLAAGTLRGEVQDDALATYAHKLNKDEARLDWSRPAVELERQVRAFTPWPVCHSSLAG 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ +K+L + L G G PG ++ +AC +GA+R+ RLQ GG+ L D
Sbjct: 240 AS----LKVLGASLGHGSGTPGSILEASRDGLLVACGEGALRLTRLQLPGGKPLAFADLY 295
Query: 299 LGCP--VIIGCIVG 310
G ++G
Sbjct: 296 NSRREQFAAGQVLG 309
>gi|228909691|ref|ZP_04073514.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis IBL 200]
gi|228849980|gb|EEM94811.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis IBL 200]
Length = 314
Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats.
Identities = 107/313 (34%), Positives = 162/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + +V V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYEVVGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGLLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++++ ++ E V+NHIR LSP+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLSPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E V + G ++ F +A S V+I LQ +G + + F
Sbjct: 240 -GQVVKVWWGEKVPVTEPAEAGTIVAIEEDGFVVATSNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|255282545|ref|ZP_05347100.1| methionyl-tRNA formyltransferase [Bryantella formatexigens DSM
14469]
gi|255266838|gb|EET60043.1| methionyl-tRNA formyltransferase [Bryantella formatexigens DSM
14469]
Length = 332
Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats.
Identities = 107/336 (31%), Positives = 172/336 (51%), Gaps = 33/336 (9%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT +FAV TL+AL+SS H + +V+TQP +P G RG ++ V ++A +P
Sbjct: 1 MRVVFMGTPDFAVGTLRALISSRHEVAAVFTQPDKPKG-RGKSVQITPVKEEALAAGIPV 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ +E EQ +V VVVA+G +IPQ +L+ + G N HASLLP++RGAAP
Sbjct: 60 FQPVRVREESVLEQIRELAPEVIVVVAFGQIIPQAVLDIPRYGCVNVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ +G+ M+MD LDTG + KV ++ + L +LSV A +++
Sbjct: 120 IQWAVINGEEFSGVTTMQMDAGLDTGDMLLTEKVALAPDETGGSLFNKLSVTGAQLLLKT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKI-SKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD LE ++ PQ T + K + +++ RSA + +R L+P+P A+ +
Sbjct: 180 MDALENGSVTPQPQPAESPTAYAAMLKKTDGEIDWSRSAAEIERLVRGLNPWPSAYTHL- 238
Query: 241 IGNKHERIKLLESQLVEGEG-----------------------KPGEVI---NPNFTIAC 274
+ +K+ ++L E +G PG V+ +
Sbjct: 239 ---NGKTLKIWRAELYEKDGDGASGEADEKRTAAEKAEKEMCTAPGTVVKVTKSELCVQT 295
Query: 275 SQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
G + + +Q G + +D FL G V G +G
Sbjct: 296 GDGVLSLTEVQLEGKKRMDTAAFLRGFSVAEGARLG 331
>gi|289578509|ref|YP_003477136.1| methionyl-tRNA formyltransferase [Thermoanaerobacter italicus Ab9]
gi|289528222|gb|ADD02574.1| methionyl-tRNA formyltransferase [Thermoanaerobacter italicus Ab9]
Length = 309
Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats.
Identities = 110/313 (35%), Positives = 172/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT EFAV +LQ L +++ SV TQP + G RG+K S V + A + +
Sbjct: 1 MKIVFMGTPEFAVPSLQKLFEEGYNVASVVTQPDKQKG-RGMKLSFSPVKEVALQKGVEI 59
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K+ N D VVVAYG ++P+ IL K G N HASLLP++RGAA
Sbjct: 60 LQPEKIKNNLDFLHRLKEINPDAIVVVAYGKILPEEILTLPKYGCINVHASLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ ETGI M MDK LDTG + + +PI + L +LS L A ++E
Sbjct: 120 PINWAIINGEKETGITTMLMDKGLDTGDMLIKKSIPILEEDDAETLHDKLSRLGAEVLIE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +LE+ L Q E +YA + K +N+ ++AE + N IR + P+PG +
Sbjct: 180 TLKRLEKGTLTPVKQKEEEASYAPILIKEMGHINWNKTAEEIRNLIRGMKPWPGCYTFYK 239
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ + ++VE GK G V+ + + C + A++I+ +Q+ G + + I +
Sbjct: 240 D----KMLKIWKGEIVEYNGKEENGTVLKSKGDLIVKCDKNALKIVEIQQEGSKKMSIRE 295
Query: 297 FLLGCPVIIGCIV 309
+L+G + G I+
Sbjct: 296 YLIGHNIPEGTIL 308
>gi|305666664|ref|YP_003862951.1| methionyl-tRNA formyltransferase [Maribacter sp. HTCC2170]
gi|88707469|gb|EAQ99713.1| methionyl-tRNA formyltransferase [Maribacter sp. HTCC2170]
Length = 322
Score = 185 bits (469), Expect = 8e-45, Method: Composition-based stats.
Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 6/309 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VFMGT EFAV L L+ + + +V V T P +PAG RG K SAV K A+ L
Sbjct: 10 KLRIVFMGTPEFAVTILDKLIQNDYDVVGVITSPDKPAG-RGRKINKSAVKKYAESKGLN 68
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P L E++ + L+ +V ++P+ + K G +N HASLLP +RGAAP
Sbjct: 69 IIQPANLKAEDFLEELAALNANLQIVVAFRMLPRAVWEMPKYGTFNLHASLLPDYRGAAP 128
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ ETG+ +D +DTG + K+ I ++ + L +L L A ++E
Sbjct: 129 INWAIINGETETGVTTFFIDDKIDTGEMVLQEKIGIGADDSAGDLHDKLMHLGADLVMET 188
Query: 182 MDKLEQNNLPLSPQIENGI-TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+++ N+ + Q + A KI K ++++ + ++NHIR LSP+PG+W +
Sbjct: 189 AKQIQNGNVVRTKQTFSDELRSAPKIHKNTCKIDWGKPGSQIYNHIRGLSPYPGSWTTLT 248
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ IK+ + E + G++I +A G + ++ +Q G R +DI D
Sbjct: 249 NDGEEIFIKIYKVTKEEEKHGYNNGQIIFGKKEMKVAVKDGFINLLEIQLPGKRRMDIRD 308
Query: 297 FLLGCPVII 305
L G +
Sbjct: 309 VLNGLKLSK 317
>gi|27364479|ref|NP_760007.1| methionyl-tRNA formyltransferase [Vibrio vulnificus CMCP6]
gi|31340072|sp|Q8DDE4|FMT_VIBVU RecName: Full=Methionyl-tRNA formyltransferase
gi|27360598|gb|AAO09534.1| methionyl-tRNA formyltransferase [Vibrio vulnificus CMCP6]
Length = 315
Score = 185 bits (468), Expect = 8e-45, Method: Composition-based stats.
Identities = 111/314 (35%), Positives = 172/314 (54%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 PLRIVFAGTPDFAAQHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKTIALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDEAKQALADLNADIMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI ++ +A + +L+ L +VE
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIDASDTSATMYDKLAKLGPVVLVE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K+SK E R+N+ AE++ +RA +P+P + E+
Sbjct: 183 CLADIAAGTAIAIKQDDERANYAKKLSKEEARINWQDDAEHIERCVRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E+ + G ++ +A G + + ++Q G + + + D
Sbjct: 243 ENSIKVWQSRVEA--SSHDAPAGTILKADKSGIYVATGHGCLVLEQIQIPGKKAMPVQDV 300
Query: 298 LLGCP--VIIGCIV 309
L +G ++
Sbjct: 301 LNARAAWFEVGSVL 314
>gi|295691223|ref|YP_003594916.1| methionyl-tRNA formyltransferase [Caulobacter segnis ATCC 21756]
gi|295433126|gb|ADG12298.1| methionyl-tRNA formyltransferase [Caulobacter segnis ATCC 21756]
Length = 308
Score = 185 bits (468), Expect = 9e-45, Method: Composition-based stats.
Identities = 125/308 (40%), Positives = 181/308 (58%), Gaps = 2/308 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ F+GT +FAV L LV+S H IV+VY+QPP P G RG + S VH A+ LP
Sbjct: 1 MRIAFLGTPDFAVTCLAELVASGHEIVAVYSQPPAPRG-RGQELKPSPVHAFAEGLGLPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + E + D AVVVA+G ++ + +L A + G +N HASLLPRWRGAAP
Sbjct: 60 RTPVSMKTPEEIEAFKALDLDAAVVVAFGQILVKDVLEAPRHGCFNLHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD TG+ +M+M + LD GP+ +V I+++ A L +L+ + A + A
Sbjct: 120 IQRAIMAGDPVTGVQVMRMSEGLDEGPILMSEQVAIAADDTAATLHDKLATVGARLLPVA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ + +PQ E+G+TYA+KI E R+++ R A V HIR LSPFPGAW E
Sbjct: 180 LAAIEREVVRETPQSEDGVTYAKKIKSAEARIDWTRPAAEVDRHIRGLSPFPGAWFEAPS 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
R+K L S++ G G ++ IAC + ++R+++ QR G V D F G
Sbjct: 240 EKGPVRVKALLSRVEAASGVAGTALDDALLIACGEASIRLLKAQREGKGVQDAETFTRGF 299
Query: 302 PVIIGCIV 309
P+ G ++
Sbjct: 300 PIPAGTVL 307
>gi|160945219|ref|ZP_02092445.1| hypothetical protein FAEPRAM212_02738 [Faecalibacterium prausnitzii
M21/2]
gi|158442950|gb|EDP19955.1| hypothetical protein FAEPRAM212_02738 [Faecalibacterium prausnitzii
M21/2]
Length = 306
Score = 185 bits (468), Expect = 9e-45, Method: Composition-based stats.
Identities = 94/310 (30%), Positives = 167/310 (53%), Gaps = 7/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT + A L+AL ++ H I +VYT+ +P G R V + A P
Sbjct: 1 MRILFMGTPDIAAECLKALYAAGHDICAVYTRRDKPVG-RKQVLTAPPVKEVALAHGTPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E + + ++ VVVAYG ++P+ +L + G N H SLLP++RG+AP
Sbjct: 60 FQPRTLRDGSEDDTIRALAPELIVVVAYGCILPKSVLEMPRYGCINLHVSLLPKYRGSAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q +++ GD ETG++IM+MD+ LDTG V + +K+ I + L ++ + A A+ E
Sbjct: 120 VQWSVLNGDAETGVSIMQMDEGLDTGDVLYCKKIVIDPEETSGELFDRVTAVGAEALCET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ L PQ T A ++K + +A ++HN +R ++P+PGAW I
Sbjct: 180 IPQIAAGTLTAVPQQHENATLAPMLNKEMAEFHLTDTAVHIHNWVRGMNPWPGAWF---I 236
Query: 242 GNKHERIKLLESQLVEGEGK-PGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +++K++ S++ G+ PG V+ T+AC +GA++++ + G + +D F
Sbjct: 237 TSGGKKLKVMSSRVAAAHGEAPGTVLATKPLTVACGEGAIQLLEVVPEGKKPMDGTAFAA 296
Query: 300 GCPVIIGCIV 309
G + G +
Sbjct: 297 GLRLKTGDSL 306
>gi|37681410|ref|NP_936019.1| methionyl-tRNA formyltransferase [Vibrio vulnificus YJ016]
gi|320154883|ref|YP_004187262.1| methionyl-tRNA formyltransferase [Vibrio vulnificus MO6-24/O]
gi|39931193|sp|Q7MGK5|FMT_VIBVY RecName: Full=Methionyl-tRNA formyltransferase
gi|37200162|dbj|BAC95990.1| methionyl-tRNA formyltransferase [Vibrio vulnificus YJ016]
gi|319930195|gb|ADV85059.1| methionyl-tRNA formyltransferase [Vibrio vulnificus MO6-24/O]
Length = 315
Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 113/314 (35%), Positives = 173/314 (55%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 PLRIVFAGTPDFAAQHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKTIALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDEAKQALADLNADIMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI ++ +A + +L+ L A+VE
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIDASDTSATMYDKLAKLGPVALVE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K+SK E R+N+ AE++ +RA +P+P + E+
Sbjct: 183 CLADIAAGTAIAIKQDDERANYAKKLSKEEARINWQDDAEHIERCVRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E+ + G ++ IA G + + ++Q G + + + D
Sbjct: 243 ENSIKVWQSRVEA--SSHDAPAGTILKADKSGIYIATGHGCLVLEQIQIPGKKAMPVQDV 300
Query: 298 LLGCP--VIIGCIV 309
L +G ++
Sbjct: 301 LNARAAWFEVGSVL 314
>gi|88801026|ref|ZP_01116575.1| methionyl-tRNA formyltransferase [Reinekea sp. MED297]
gi|88776229|gb|EAR07455.1| methionyl-tRNA formyltransferase [Reinekea sp. MED297]
Length = 314
Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 111/306 (36%), Positives = 168/306 (54%), Gaps = 7/306 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M L +VF GT +FA L+AL++S H++++VY+QP RPAG RG K S V A E +
Sbjct: 1 MALNIVFAGTPDFAAEHLRALLNSHHNVIAVYSQPDRPAG-RGRKLTASPVKALALEHDI 59
Query: 61 PALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P E L D+ VVVAYGL++PQ +L++ +LG N HASLLPRWRGA
Sbjct: 60 PVYQPLNFKDEASVDELKSLNADLMVVVAYGLILPQVVLDSPRLGCVNVHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API RA++AGD+ TG+ IM+MD LDTG + I ++ + L L + A++
Sbjct: 120 APIHRALLAGDDRTGVTIMQMDAGLDTGDMLVTADCAIEADDTSQTLHDRLIEIGGPALI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
A+D+LE + Q + YA K+ K E +++ SA ++ IR L+P+PGA+ +
Sbjct: 180 TALDQLENGSAQPVVQDDEFACYARKLEKSEGMIDWQTSATDIDRQIRGLTPWPGAFTQW 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ R+ ++ E +PG ++ +A +G ++I LQ G + + I D
Sbjct: 240 --QGQTVRLHKAQAIQSGTEAEPGHIVEMSAAGLKVATGKGLLKIETLQLPGKKAMAISD 297
Query: 297 FLLGCP 302
L
Sbjct: 298 LLNSRR 303
>gi|261250605|ref|ZP_05943180.1| methionyl-tRNA formyltransferase [Vibrio orientalis CIP 102891]
gi|260939174|gb|EEX95161.1| methionyl-tRNA formyltransferase [Vibrio orientalis CIP 102891]
Length = 315
Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 119/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 PLKIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKNIALEHNIP 62
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q + NAD+ VVVAYGL++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDEAKQELVELNADLMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGDNETG+ IM+MD LDTG + + +PI + +A + ++L+ L A+VE
Sbjct: 123 PIQRSIWAGDNETGVTIMQMDIGLDTGDMLKIATLPIEATDTSATMYEKLAELGPDALVE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + Q + YA+K+SK E R+N+ A ++ +RA +P+P + E
Sbjct: 183 CLADIAEGKAVAEKQDDELANYAKKLSKEEARINWADDAAHIERCVRAFNPWPMSHFEAA 242
Query: 241 IGNKHERIKLLESQLVE-GEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S++ E KP G ++ IA G + + +LQ G + + +
Sbjct: 243 ENS----IKVWQSRIDEQTSSKPAGTILQADKTGIYIATGNGVLVLEQLQVPGKKAMPVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G +
Sbjct: 299 DILNSRANWFEVGTQL 314
>gi|269962645|ref|ZP_06176990.1| methionyl-tRNA formyltransferase [Vibrio harveyi 1DA3]
gi|269832568|gb|EEZ86682.1| methionyl-tRNA formyltransferase [Vibrio harveyi 1DA3]
Length = 315
Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 113/316 (35%), Positives = 176/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E +P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKTIALEHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDEAKQELADLNADIMVVVAYGLLLPQVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI ++ +A + ++L+ L A+++
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEASDTSASMYEKLAGLGPDALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K+SK E R+N+ A ++ +RA +P+P + E
Sbjct: 183 CLADIATGQAEPVKQDDELANYAKKLSKEEARINWNDDAAHIERCVRAFNPWPMSHFEAA 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S++ E + G ++ +A G + + +LQ G + + +
Sbjct: 243 ENS----IKVWQSRVAEQTSDKPAGTIVQADKTGIYVATGNGTLVLEQLQVPGKKAMSVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G +
Sbjct: 299 DILNSRASWFEVGTQL 314
>gi|85711006|ref|ZP_01042067.1| Methionyl-tRNA formyltransferase [Idiomarina baltica OS145]
gi|85695410|gb|EAQ33347.1| Methionyl-tRNA formyltransferase [Idiomarina baltica OS145]
Length = 324
Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 126/317 (39%), Positives = 182/317 (57%), Gaps = 11/317 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L AL++S H +V+VYTQP R AG RG K SAV + A E ++
Sbjct: 6 PLRIVFAGTPEFAADHLAALLNSDHEVVAVYTQPDRKAG-RGKKLQPSAVKQLALEHAIA 64
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K +Q + DV VVVAYGL++P+ IL K G N H SLLPRWRGAA
Sbjct: 65 VEQPEKLNTALAQQQLAEYRPDVMVVVAYGLLLPEPILTTPKYGCINVHGSLLPRWRGAA 124
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD +G+A+M+M+K LDTGPV + + I + +A L ++L+ L A+V
Sbjct: 125 PIQRSIWAGDEASGVAVMQMEKGLDTGPVLHVERCAIDAQETSASLYKKLAQLGPRALVT 184
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D +E Q + TYA+K+SK E ++++ A + ++RA +P+P AW E+
Sbjct: 185 TLDDIESYRERAEVQNHDAATYAKKLSKDEGKIDWSD-ATQLERNVRAFNPWPFAWFELP 243
Query: 241 IGNKHERI-KLLESQLV--EGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDI 294
G +R K+ ++ + + PG +I+ T+ACSQGA+ + LQ G + L +
Sbjct: 244 GGKPGQRTVKVHQASVSQTDHRSAPGTIIDCSPAGITVACSQGALTLHSLQLPGKKPLPV 303
Query: 295 GDFLLGCP--VIIGCIV 309
D L G IG +
Sbjct: 304 SDLLNGYATTFAIGVNL 320
>gi|332362986|gb|EGJ40775.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK49]
Length = 313
Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 91/317 (28%), Positives = 159/317 (50%), Gaps = 12/317 (3%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M + +++FMGT +F+ L+ L+ S + +++V TQP R G R + ++ V + A E+
Sbjct: 1 MKMMKIIFMGTPDFSATVLKGLLDSGQYEVLAVVTQPDRAVG-RKREIRMTPVKELALEY 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP P KL Q + L +V A L + N HASLLP++RG
Sbjct: 60 KLPLYQPEKLAQSSDLEELMNLEADGIVTAAFGQFLPSRLLDSVDFAVNVHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API A++ GD + G+ IM+M K +D G + + PI N L ++L+++ +
Sbjct: 120 GAPIHYALINGDEQAGVTIMEMVKEMDAGDMIASKATPIEETDNVGTLFEKLALIGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + + PQ + +T++ IS E R+++ ++ + N IR + P+P A
Sbjct: 180 LDVLPAYRAGQIIPQPQDPSQVTFSPNISPEEERIDWSKTNRQIFNQIRGMYPWPVAHTL 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +R K+ E+ + G+G+PG+++ +A QGA+ + +Q AG + I
Sbjct: 240 LQG----QRFKIYEADMAAGDGQPGQILSISKKELVVAAGQGALSLKTVQPAGKPKMAIV 295
Query: 296 DFLL--GCPVIIGCIVG 310
DFL G + IG G
Sbjct: 296 DFLNGLGRSLSIGDTFG 312
>gi|206971240|ref|ZP_03232191.1| methionyl-tRNA formyltransferase [Bacillus cereus AH1134]
gi|206734012|gb|EDZ51183.1| methionyl-tRNA formyltransferase [Bacillus cereus AH1134]
Length = 314
Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 105/313 (33%), Positives = 162/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + +V V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYEVVGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E + + G ++ F +A S V+I LQ +G + + F
Sbjct: 240 -GQVVKVWWGEKVPIIEPAEAGTIVAIEEDGFVVATSNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|114799265|ref|YP_759243.1| methionyl-tRNA formyltransferase [Hyphomonas neptunium ATCC 15444]
gi|114739439|gb|ABI77564.1| methionyl-tRNA formyltransferase [Hyphomonas neptunium ATCC 15444]
Length = 319
Score = 185 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 139/312 (44%), Positives = 183/312 (58%), Gaps = 5/312 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+ FMG+ A+ L+AL+++ H I VY+QPPRP+G RG K + VH AQ L
Sbjct: 8 PLRIAFMGSPGIALGVLEALIAAGHEIACVYSQPPRPSG-RGQKLTPTPVHAFAQARGLE 66
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P EE F + N D AVVVAYGL++PQ +LNA +LG N HAS+LPRWRGAA
Sbjct: 67 VRTPKSLKKPEEQAAFAALNLDAAVVVAYGLILPQAVLNAPRLGCLNMHASILPRWRGAA 126
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAIMAGD ETG+ M M+ LDTGPV + PI+ L L+ L A
Sbjct: 127 PIQRAIMAGDTETGVDAMMMEAGLDTGPVLESVRTPITPQDTAGTLHDRLAALAAELAPR 186
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L +L PQ E G+TYA+KIS + R+++ + A V IR L+P GAW E
Sbjct: 187 ALAGLADGSLKPVPQTEEGMTYAQKISAEDQRIDWTKPAAEVDCQIRGLAPASGAWCEAD 246
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDF 297
+G R+K+L S+L + PG +I+ +AC G AVR+MRLQ+ GG+ L+ DF
Sbjct: 247 LGQGPVRLKVLFSELTDLWNPAPPGTLIDDRLAVACGDGRAVRLMRLQKPGGKALEARDF 306
Query: 298 LLGCPVIIGCIV 309
L G + G I
Sbjct: 307 LAGNHLPAGKIF 318
>gi|77917860|ref|YP_355675.1| methionyl-tRNA formyltransferase [Pelobacter carbinolicus DSM 2380]
gi|77543943|gb|ABA87505.1| methionyl-tRNA formyltransferase [Pelobacter carbinolicus DSM 2380]
Length = 315
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 114/314 (36%), Positives = 165/314 (52%), Gaps = 10/314 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++R +FMGT EFA+ TLQ L+ + + V+TQP R G RG V + A +LP
Sbjct: 6 SIRTIFMGTPEFALPTLQGLLEAGVDLCGVFTQPDRRKG-RGKVLAPPPVKELALRHNLP 64
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K EQ S D+ VVVAYG ++P+ +L+ + G N HASLLPR+RGAA
Sbjct: 65 VLQPEKLRDPSAVEQIRSLKPDLIVVVAYGQILPKSVLDIPRYGCINVHASLLPRYRGAA 124
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI +A++ G+ TG+ M MD LDTG + R I + L L++L AM E
Sbjct: 125 PINKAVVDGEQVTGVTTMLMDVGLDTGDILVKRATEIGNEETAGELHDRLALLGREAMEE 184
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L L Q + YA + K + +++ R A +HN +R LSP+PGA+
Sbjct: 185 TLRRLCDGTLRSEAQDDAQSCYAPMMKKEDGCIDWSRPAGVIHNLVRGLSPWPGAYTR-- 242
Query: 241 IGNKHERIKLLESQLVEGE-GKPGEVINP---NFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +KL + EG +PG V++ IAC +G +R+ LQ AG + L GD
Sbjct: 243 --WNGQTLKLGRTVAEEGSEAEPGTVVSADETGVCIACGEGVLRVRELQLAGKKKLPAGD 300
Query: 297 FLLGCPVIIGCIVG 310
FL G + G +G
Sbjct: 301 FLRGTSLSAGARLG 314
>gi|49474897|ref|YP_032938.1| methionyl-tRNA formyltransferase [Bartonella henselae str.
Houston-1]
gi|73919378|sp|Q6G5F1|FMT_BARHE RecName: Full=Methionyl-tRNA formyltransferase
gi|49237702|emb|CAF26891.1| Methionyl-tRNA formyltransferase [Bartonella henselae str.
Houston-1]
Length = 311
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 148/309 (47%), Positives = 196/309 (63%), Gaps = 4/309 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR+ FMGT +F+V LQAL+ + H I +VY+QPPRPAGRRGLK + S V A+ S+
Sbjct: 1 MVLRLSFMGTPDFSVPILQALLDAGHDIAAVYSQPPRPAGRRGLKLIPSPVQNLAKAKSI 60
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P E+ +F DVA+VVAYGL++P+ IL + G +N HASLLPRWRGA
Sbjct: 61 PVFTPQTLKTAEQQTKFTELAVDVAIVVAYGLLLPKTILETPRFGCFNAHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD ETG+ IMKMD+ LDTGP+A +PI+ N T L +LS + A M+
Sbjct: 121 APIQRAIMAGDKETGMTIMKMDEGLDTGPIALSCAIPITDNTTTNELAHKLSHIGADLMI 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + LE+ L L+ Q ITYA KI K ETR+++ + AE +H +IRALSPFPG W M
Sbjct: 181 EMLSALEKGQLKLTAQSGENITYASKIKKEETRIDWTKPAEFIHRYIRALSPFPGCWCNM 240
Query: 240 MIGNKHERIKLLESQLVE-GEGKPGEVIN--PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
I + ER+K+L S+L + G + + I C QG + + LQR+GG+VL+
Sbjct: 241 NIAGREERVKILGSRLTTRPSLEIGRIEKGPDSLLIHCGQGCLEVTYLQRSGGKVLECAT 300
Query: 297 FLLGCPVII 305
FL G +
Sbjct: 301 FLQGAHISA 309
>gi|261213230|ref|ZP_05927512.1| methionyl-tRNA formyltransferase [Vibrio sp. RC341]
gi|260837504|gb|EEX64207.1| methionyl-tRNA formyltransferase [Vibrio sp. RC341]
Length = 315
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 116/302 (38%), Positives = 172/302 (56%), Gaps = 7/302 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAG-RGKKLTASPVKTLALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P EE +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSEESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ IM+MD LDTG + + +PI +N +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEANDTSASMYDKLAELGPQALIE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q Q + YA K++K E R+++ A ++ IRA +P+P + E+
Sbjct: 183 CLSDIAQGTAVAVKQDDTQANYAHKLNKEEARIDWSNDAIHIERCIRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E++ V PG ++ +A QG + + LQ G + L + D
Sbjct: 243 ENSIKVWQARVETRAV--TQAPGTILQADKSGIYVATGQGVLVLESLQIPGKKALPVQDI 300
Query: 298 LL 299
L
Sbjct: 301 LN 302
>gi|295105556|emb|CBL03100.1| methionyl-tRNA formyltransferase [Faecalibacterium prausnitzii
SL3/3]
Length = 306
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 94/310 (30%), Positives = 166/310 (53%), Gaps = 7/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT + A L+AL ++ H I +VYT+ +P G R V + A P
Sbjct: 1 MRILFMGTPDIAAECLKALYAAGHDICAVYTRRDKPVG-RKQVLTAPPVKEVALAHGTPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E E + ++ VVVAYG ++P+ +L + G N H SLLP++RG+AP
Sbjct: 60 FQPRTLRDGSEDENIRALAPELIVVVAYGCILPKSVLEMPRYGCINLHVSLLPKYRGSAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q +++ GD ETG++IM+MD+ LDTG V + +K+ I + L ++ + A A+ E
Sbjct: 120 VQWSVLNGDAETGVSIMQMDEGLDTGDVLYCKKIAIDPEETSGELFDRVTAVGAEALCET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ L PQ T A ++K + +A ++HN +R ++P+PGAW
Sbjct: 180 IPQIAAGTLTAVPQDHENATLAPMLNKEMAEFHLTDTATHIHNWVRGMNPWPGAWF---S 236
Query: 242 GNKHERIKLLESQLVEGEGK-PGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +++K++ ++ G+ PG V+ T+ACS+GA++++ + G + +D F
Sbjct: 237 TSGGKKLKVMSCRVATAHGEAPGTVLGTKPLTVACSEGAIQLLEVVPEGKKPMDGTAFAA 296
Query: 300 GCPVIIGCIV 309
G + G +
Sbjct: 297 GRRLKTGDSL 306
>gi|110678660|ref|YP_681667.1| methionyl-tRNA formyltransferase, putative [Roseobacter
denitrificans OCh 114]
gi|122972952|sp|Q16AL2|FMT_ROSDO RecName: Full=Methionyl-tRNA formyltransferase
gi|109454776|gb|ABG30981.1| methionyl-tRNA formyltransferase, putative [Roseobacter
denitrificans OCh 114]
Length = 305
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 143/308 (46%), Positives = 185/308 (60%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +F+V L+ALV++ H I VY+QPPRPAG RG K S V +A+ LP
Sbjct: 1 MRLVFMGTPDFSVPVLEALVAAGHEIACVYSQPPRPAG-RGKKDRPSPVQARAEALGLPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L +E + +VAVVVAYGL++PQ IL+A G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLRSDEALADFAGLQAEVAVVVAYGLILPQAILDAPTRGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD +TG+ IM+M+ LDTGPV V I TA L LS L A +V+
Sbjct: 120 IHRAIMAGDAQTGVCIMQMEAGLDTGPVLAREAVDIGPEETTAQLHDRLSALGAALIVDT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L+ L PQ E+G+TYA KI K E +V++ + AE+V IR LSPFPGAW +
Sbjct: 180 LARLD--QLEAVPQPEDGVTYAAKIDKAEAQVDWDQPAEDVDRLIRGLSPFPGAWTLLGD 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
R+KLL S++ E G PG V + C GAV + ++QRAG V DFL G
Sbjct: 238 T----RVKLLGSRIAEASGVPGTVRLNPLRVVCGTGAVELTQVQRAGKAVQSAADFLNGS 293
Query: 302 PVIIGCIV 309
+ G +
Sbjct: 294 AIEDGTLF 301
>gi|260887302|ref|ZP_05898565.1| methionyl-tRNA formyltransferase [Selenomonas sputigena ATCC 35185]
gi|330838944|ref|YP_004413524.1| methionyl-tRNA formyltransferase [Selenomonas sputigena ATCC 35185]
gi|260862938|gb|EEX77438.1| methionyl-tRNA formyltransferase [Selenomonas sputigena ATCC 35185]
gi|329746708|gb|AEC00065.1| methionyl-tRNA formyltransferase [Selenomonas sputigena ATCC 35185]
Length = 313
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 103/309 (33%), Positives = 167/309 (54%), Gaps = 11/309 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M RV+FMGT +FAV L LV S +V+V TQP RP G RG K + V AQE
Sbjct: 1 MKRFRVIFMGTPDFAVPCLARLVEIS-DVVAVVTQPDRPKG-RGQKLLPPPVKVFAQEHG 58
Query: 60 LPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ P ++ ++ L D+ VVVA+G ++ + IL+ LG N HASLLPR+RG
Sbjct: 59 IAVYQPVRVKAPDFVDILRGLAPDLIVVVAFGQILSKEILSLPPLGCINVHASLLPRYRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+Q AI+ G+ ETG+ M MD+ LDTG + +PI+ + A L + L A +
Sbjct: 119 AAPMQWAIVRGEKETGVTTMFMDEGLDTGDMLMRETLPITQAMTAAELHDAMMKLGADVL 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ L + L +PQ + TYA + K R+++ +SA+ +H+ +R L+ +PGA+
Sbjct: 179 ERTIFSLSEGTLKRTPQDDALSTYAPLLDKEVGRIDWKKSAQEIHDLVRGLNSWPGAYTM 238
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ ++ K+ ++L +G +PGE++ + +G + I+ +Q + + G
Sbjct: 239 LAG----QKFKIWRTRLADGTAEPGEIVSLTKQGLLVGTGEGMLEILEVQAPSKKKMAAG 294
Query: 296 DFLLGCPVI 304
D++ G +
Sbjct: 295 DYVRGHGLQ 303
>gi|209693698|ref|YP_002261626.1| methionyl-tRNA formyltransferase [Aliivibrio salmonicida LFI1238]
gi|208007649|emb|CAQ77759.1| methionyl-tRNA formyltransferase [Aliivibrio salmonicida LFI1238]
Length = 321
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 114/316 (36%), Positives = 175/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT +FA L AL+ S H I+ VYTQP RPAG RG K S V + A + ++P
Sbjct: 10 PLRIIFAGTPDFAARHLAALLDSHHEIIGVYTQPDRPAG-RGKKLTASPVKELALKHAIP 68
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ +Q L+ D+ VVVAYGL++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 69 VFQPENFKSDDAKQELADQNADLMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWRGAA 128
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI + +A + +L+ L A+V
Sbjct: 129 PIQRSIWAGDAETGVTIMQMDIGLDTGDMLNITTLPIEATDTSASMYNKLAELGPIALVN 188
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + N Q + YA+K+SK E ++++ AE + +RA +P+P + +
Sbjct: 189 CLSDIANGNALAEKQNDEKANYAKKLSKEEAKIDWTMDAETIERCVRAFNPWPMSHFSVD 248
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S++ EG+ PG +I +A S A+ +LQ G + + +
Sbjct: 249 D----KAIKVWQSRVETYEGDATPGTIIQADKTGIYVATSSNAIVFEQLQVPGKKAMGVQ 304
Query: 296 DFLLGCP--VIIGCIV 309
D L +G +
Sbjct: 305 DILNSRKEWFEVGNTL 320
>gi|254229998|ref|ZP_04923399.1| methionyl-tRNA formyltransferase [Vibrio sp. Ex25]
gi|262392830|ref|YP_003284684.1| methionyl-tRNA formyltransferase [Vibrio sp. Ex25]
gi|151937500|gb|EDN56357.1| methionyl-tRNA formyltransferase [Vibrio sp. Ex25]
gi|262336424|gb|ACY50219.1| methionyl-tRNA formyltransferase [Vibrio sp. Ex25]
Length = 315
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 110/316 (34%), Positives = 176/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H +++VYT P RPAG RG K V + A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEVIAVYTNPDRPAG-RGKKLAAPPVKQLALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYG+++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPESFKSDEAKQELADLNADLMVVVAYGMLLPQAVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI + +A + ++L+ L A+++
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYEKLAELGPEALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K+SK E R+N+ A ++ +RA +P+P + E
Sbjct: 183 CLADIATGKAEPVKQDDELANYAKKLSKEEARINWNDDAAHIERCVRAFNPWPMSHFEAA 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S++ E + G ++ +A G + + +LQ G + + +
Sbjct: 243 ENS----IKVWQSRVAEQTSDKPAGTIVQADKTGIYVATGNGVLVLEQLQVPGKKAMSVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G ++
Sbjct: 299 DILNSRAAWFEVGTLL 314
>gi|310765565|gb|ADP10515.1| methionyl-tRNA formyltransferase [Erwinia sp. Ejp617]
Length = 315
Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats.
Identities = 113/316 (35%), Positives = 177/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+L ++F GT +FA L AL+SS H +V V+TQP RPAG RG K S V + A++ ++
Sbjct: 4 SLNIIFAGTPDFAARHLDALLSSGHRVVGVFTQPDRPAG-RGNKVTASPVKQLAEQHNIA 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE +Q ++ DV VVVAYGL++P+ +L+ + G N H SLLPRWRGAA
Sbjct: 63 VFQPASLRSEENQQLVAALNADVMVVVAYGLILPKAVLDMPRFGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + PI + +A L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDIGLDTGDMLHKLACPIDAADTSATLYDKLADLGPAGLLT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + Q E+ ++YAEK+SK E R+++ SAE + IRA +P+P ++ +
Sbjct: 183 TLAQLAGGSARPQMQDESLVSYAEKLSKEEARLDWSLSAEQLERCIRAFNPWPVSYFVV- 241
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++ +PGE++ + + G + I LQ AG + +
Sbjct: 242 ---DEQPVKVWKASVLPAVNGHQPGEILQADKQGIQVVTADGVLNIEELQPAGKKAMKAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G I+
Sbjct: 299 DLLNSRREWFTPGNII 314
>gi|327478633|gb|AEA81943.1| methionyl-tRNA formyltransferase [Pseudomonas stutzeri DSM 4166]
Length = 314
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 133/315 (42%), Positives = 183/315 (58%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA LQAL+ + SIV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAQHLQALLDAGKSIVAVYTQPDRPAG-RGQKLMPSPVKQLAVQHDIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + + AD+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VLQPQTLRDPAAQAELAALQADLMVVVAYGLILPQAVLDLPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD+E+G+ +M+M+ LDTGP+ PIS L L++L AHA+V+
Sbjct: 123 PIQRAIEAGDSESGVTVMQMEAGLDTGPMLLKVNTPISDEDTGGSLHDRLALLGAHAVVQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+D L L Q ++ TYA K+SK E RV++ R A + IRA +P+P +
Sbjct: 183 AVDALAAGTLTPEVQDDSLATYAHKLSKDEARVDWTRPAVELERLIRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+ ++L EG G PG ++ T+AC +GA+ + RLQ GG+ L GD
Sbjct: 242 ---NGETLKIHAARLGEGRGVPGLILDASKAGLTVACGEGALSLTRLQLPGGKPLGFGDL 298
Query: 298 LLGCP--VIIGCIVG 310
G ++G
Sbjct: 299 YNSRREQFAPGLVLG 313
>gi|28899817|ref|NP_799422.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus RIMD
2210633]
gi|260362017|ref|ZP_05775022.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus K5030]
gi|260876496|ref|ZP_05888851.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus AN-5034]
gi|260897447|ref|ZP_05905943.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus Peru-466]
gi|31340069|sp|Q87KD4|FMT_VIBPA RecName: Full=Methionyl-tRNA formyltransferase
gi|28808069|dbj|BAC61306.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus RIMD
2210633]
gi|308087883|gb|EFO37578.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus Peru-466]
gi|308090353|gb|EFO40048.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus AN-5034]
gi|308114173|gb|EFO51713.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus K5030]
Length = 315
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 109/316 (34%), Positives = 176/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H +++VYT P RPAG RG K V + A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEVIAVYTNPDRPAG-RGKKLAAPPVKQLALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYG+++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPESFKSDEAKQELADLNADLMVVVAYGMLLPQAVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI + +A + ++L+ L A+++
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYEKLAELGPEALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K++K E R+N+ A ++ +RA +P+P + E
Sbjct: 183 CLADIAAGKAVPVKQDDELANYAKKLNKEEARINWNDDAAHIERCVRAFNPWPMSHFEAA 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S++ E + G ++ +A G + + +LQ G + + +
Sbjct: 243 ENS----IKVWQSRVAEQTSDKPAGTIVQADKTGIYVATGNGVLVLEQLQVPGKKAMSVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G ++
Sbjct: 299 DILNSRAAWFEVGTLL 314
>gi|312864926|ref|ZP_07725156.1| methionyl-tRNA formyltransferase [Streptococcus downei F0415]
gi|311099546|gb|EFQ57760.1| methionyl-tRNA formyltransferase [Streptococcus downei F0415]
Length = 311
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 88/316 (27%), Positives = 161/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M +++FMGT FA L+ L+ SS ++I++V TQP R G R + ++ V + A
Sbjct: 1 MK-KIIFMGTPAFAATVLEGLISSSDYNILAVVTQPDRAVG-RKKEIRMTPVKELAIGHD 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + L ++ A L + N HASLLP++RG
Sbjct: 59 LPVYQPEKLAGSQEMADLMNLGADGIITAAYGQFLPSKLLDSMDFALNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD++ G+ IM+M K +D G + +PI N L ++L+VL ++
Sbjct: 119 APIHYALIKGDDKAGVTIMEMVKEMDAGDMLAQASLPILDEDNVGTLFEKLAVLGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + Q + ++++ I+ + R+++ +SA ++ N +R ++P+P A +
Sbjct: 179 QTLPDYLSGKIQPQAQDPDRVSFSPNITPEQERLDWNKSARDLFNQVRGMNPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ +++ V+G+G G++I + +A QG + ++ +Q AG + I D
Sbjct: 239 ----NGQRFKIYQAKPVDGQGPAGQIIEKTKKSLIVATGQGGLSLLEVQPAGKPKMKISD 294
Query: 297 FLLGC--PVIIGCIVG 310
FL G + +G + G
Sbjct: 295 FLNGLGQKLKVGDVFG 310
>gi|300313635|ref|YP_003777727.1| methionyl-tRNA formyltransferase [Herbaspirillum seropedicae SmR1]
gi|300076420|gb|ADJ65819.1| methionyl-tRNA formyltransferase protein [Herbaspirillum
seropedicae SmR1]
Length = 317
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 129/317 (40%), Positives = 184/317 (58%), Gaps = 16/317 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L+AL ++ H I V TQP RPAG RG++ S V + A + P
Sbjct: 1 MKIIFAGTPEFAAVALEALYAAGHEITLVLTQPDRPAG-RGMQLQASPVKQCALKHGTPV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
++ QE + S DV +V AYGL++P+ +L+ + G N H SLL
Sbjct: 60 AQPVSLRLDGKYPEVAQEAHALLRSTPHDVMIVAAYGLILPRSVLDIPRYGCINIHGSLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RAI AGD ETGI IM+M++ LDTGP+ + +PIS T L +L+ L
Sbjct: 120 PRWRGAAPIHRAIEAGDAETGITIMQMEEGLDTGPMMLIESLPISDEDTTGSLHDKLAAL 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A +VEAM+KLEQ LP +PQ E G YA KI+K E ++F +SAE + IRA +PFP
Sbjct: 180 GAKMIVEAMEKLEQGTLPATPQPEQGANYAAKIAKEEAALDFSQSAEQLARRIRAFNPFP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGG 289
GA + ++ + V +G+PG+V++ +AC +GA+ + LQ+ GG
Sbjct: 240 GATGRFG--DTVVKLWKARAVTVAQQGEPGQVLSADAQGGIVVACGEGALLLTELQKPGG 297
Query: 290 RVLDIGDFLLGCPVIIG 306
+ L +FL G P+ G
Sbjct: 298 KRLPAAEFLKGFPMEGG 314
>gi|228992594|ref|ZP_04152521.1| Methionyl-tRNA formyltransferase [Bacillus pseudomycoides DSM
12442]
gi|228767228|gb|EEM15864.1| Methionyl-tRNA formyltransferase [Bacillus pseudomycoides DSM
12442]
Length = 314
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 104/313 (33%), Positives = 163/313 (52%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + ++ V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVG-RKKVMTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I +IM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYSIMQGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E+ +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEDEVTFAYNIKREQEKIDWMKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ +I E V + + G ++ F +A V+I LQ +G + + F
Sbjct: 240 -GQVVKIWWGEKVPVTVQAEAGSIVAIEEDGFVVATGNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|254560756|ref|YP_003067851.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Methylobacterium extorquens DM4]
gi|254268034|emb|CAX23905.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Methylobacterium extorquens DM4]
Length = 309
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 142/310 (45%), Positives = 192/310 (61%), Gaps = 3/310 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV TL L + H+I +VYT+ P AG RG+ LS VH +A+ LP
Sbjct: 1 MRIVFMGTPDFAVPTLDRLHADGHTIAAVYTRAPARAG-RGMALKLSPVHARAEALGLPV 59
Query: 63 LVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L PT L EE + + DVAVVVAYG+++PQRIL+ + G N H SLLPRWRGAAP
Sbjct: 60 LTPTTLKSEEAAETFAGHETDVAVVVAYGMLLPQRILDLPRFGCLNLHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+MAGD E+G+ +M+M+ LDTGPVA ++ I+ + L L L A M A
Sbjct: 120 IQRAVMAGDAESGVGVMRMEAGLDTGPVAMEARLAITEGMTAGELHDALMPLGADLMGRA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LEQ+ L +PQ E G+ YA KI+ E R+++ R A V HI LSPFPGA++E +
Sbjct: 180 IRALEQDGLTFTPQAEEGVVYAHKITNEEARIDWSRPAAEVARHINGLSPFPGAYVEADL 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGG-RVLDIGDFLLG 300
G ER+K+L + EG G PG +++ T+AC GAVR++ L+RAG FL G
Sbjct: 240 GKGPERVKVLRAVTAEGSGAPGTLLDAAGTVACGTGAVRLLELRRAGKGGTASGEAFLRG 299
Query: 301 CPVIIGCIVG 310
+ G +G
Sbjct: 300 ARLAAGARLG 309
>gi|126463295|ref|YP_001044409.1| methionyl-tRNA formyltransferase [Rhodobacter sphaeroides ATCC
17029]
gi|166215504|sp|A3PMS1|FMT_RHOS1 RecName: Full=Methionyl-tRNA formyltransferase
gi|126104959|gb|ABN77637.1| methionyl-tRNA formyltransferase [Rhodobacter sphaeroides ATCC
17029]
Length = 302
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 142/307 (46%), Positives = 186/307 (60%), Gaps = 10/307 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMG+ +F+V L+AL + H +V VY QPPRPAG RG K + V +A+E LP
Sbjct: 1 MRLIFMGSPDFSVPVLEALH-AHHEVVCVYCQPPRPAG-RGKKDRPTPVQTRAEELGLPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
PT E +F + A+ AVVVAYGL++PQ IL+A + G N HASLLPRWRGAAP
Sbjct: 59 RYPTSLRTPEAQAEFAALGAEAAVVVAYGLILPQPILDAPERGCLNIHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAI+AGD ETGI IM+M+ LDTGPV K I L LS + A ++ A
Sbjct: 119 IHRAILAGDEETGICIMQMEAGLDTGPVLMCEKTHIGPEETVQDLHDRLSDMGARLILGA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++L PQ + G+TYAEKI+K E +++ R A + IR LSPFPGAW +
Sbjct: 179 L--GALDDLVPRPQPDAGVTYAEKIAKAEAGIDWTRPAAEIDRQIRGLSPFPGAWTLL-- 234
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KLL +L EG+G PG V+ P TIAC GAV I QR G R ++ +FL G
Sbjct: 235 --NGERVKLLRCRLAEGQGAPGAVL-PGLTIACGTGAVEITLAQREGKRPMEPEEFLRGF 291
Query: 302 PVIIGCI 308
P+ G
Sbjct: 292 PLPEGSR 298
>gi|228998642|ref|ZP_04158229.1| Methionyl-tRNA formyltransferase [Bacillus mycoides Rock3-17]
gi|229006143|ref|ZP_04163830.1| Methionyl-tRNA formyltransferase [Bacillus mycoides Rock1-4]
gi|228755096|gb|EEM04454.1| Methionyl-tRNA formyltransferase [Bacillus mycoides Rock1-4]
gi|228761110|gb|EEM10069.1| Methionyl-tRNA formyltransferase [Bacillus mycoides Rock3-17]
Length = 314
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 103/313 (32%), Positives = 163/313 (52%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + ++ V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVG-RKKVMTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I +IM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYSIMQGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E+ +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEDEVTFAYNIKREQEKIDWMKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E V + + G ++ F +A V+I LQ +G + + F
Sbjct: 240 -GQVVKVWWGEKVPVTVQAEAGSIVAIEEDGFVVATGNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|22536499|ref|NP_687350.1| methionyl-tRNA formyltransferase [Streptococcus agalactiae 2603V/R]
gi|25010378|ref|NP_734773.1| methionyl-tRNA formyltransferase [Streptococcus agalactiae NEM316]
gi|76788249|ref|YP_329038.1| methionyl-tRNA formyltransferase [Streptococcus agalactiae A909]
gi|76797830|ref|ZP_00780095.1| methionyl-tRNA formyltransferase [Streptococcus agalactiae 18RS21]
gi|77404964|ref|ZP_00782065.1| methionyl-tRNA formyltransferase [Streptococcus agalactiae H36B]
gi|77408102|ref|ZP_00784849.1| methionyl-tRNA formyltransferase [Streptococcus agalactiae COH1]
gi|77410632|ref|ZP_00786992.1| methionyl-tRNA formyltransferase [Streptococcus agalactiae CJB111]
gi|77413310|ref|ZP_00789505.1| methionyl-tRNA formyltransferase [Streptococcus agalactiae 515]
gi|54037116|sp|P64138|FMT_STRA5 RecName: Full=Methionyl-tRNA formyltransferase
gi|54040770|sp|P64137|FMT_STRA3 RecName: Full=Methionyl-tRNA formyltransferase
gi|123602427|sp|Q3K365|FMT_STRA1 RecName: Full=Methionyl-tRNA formyltransferase
gi|22533331|gb|AAM99222.1|AE014206_2 methionyl-tRNA formyltransferase [Streptococcus agalactiae 2603V/R]
gi|23094730|emb|CAD45949.1| methionyl tRNA formyltransferase [Streptococcus agalactiae NEM316]
gi|76563306|gb|ABA45890.1| methionyl-tRNA formyltransferase [Streptococcus agalactiae A909]
gi|76586844|gb|EAO63337.1| methionyl-tRNA formyltransferase [Streptococcus agalactiae 18RS21]
gi|77160624|gb|EAO71740.1| methionyl-tRNA formyltransferase [Streptococcus agalactiae 515]
gi|77163347|gb|EAO74298.1| methionyl-tRNA formyltransferase [Streptococcus agalactiae CJB111]
gi|77173286|gb|EAO76408.1| methionyl-tRNA formyltransferase [Streptococcus agalactiae COH1]
gi|77176403|gb|EAO79171.1| methionyl-tRNA formyltransferase [Streptococcus agalactiae H36B]
Length = 311
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 94/316 (29%), Positives = 159/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ +++ + +++V TQP R G R + ++ V + A E +
Sbjct: 1 MT-KLLFMGTPDFSATVLKGILADGKYDVLAVVTQPDRAVG-RKKEIKMTPVKEVALENN 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P KL + L +V A L + N HASLLP++RG
Sbjct: 59 IPVYQPEKLSGSPELEQLMTLGADGIVTAAFGQFLPTKLLESVGFAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G+ E G+ IM+M +D G + V I+ N + L+V+ ++
Sbjct: 119 APIHYAIINGEKEAGVTIMEMVAKMDAGDMVSKASVEITDEDNVGTMFDRLAVVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ E ++++ IS E R+++ +S+ ++ NH+R + P+P A +
Sbjct: 179 DTLPGYLSGDIKPIPQNEEEVSFSPNISPDEERIDWNKSSRDIFNHVRGMYPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R KL E + EG+G PG+VI + T+A GA+ + +Q AG +DI D
Sbjct: 239 EGN----RFKLYEVTMSEGKGSPGQVIAKTKNSLTVATGDGAIELKSVQPAGKPRMDIKD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + IG G
Sbjct: 295 FLNGVGRNLEIGDKFG 310
>gi|324991770|gb|EGC23702.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK353]
gi|327467212|gb|EGF12716.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK330]
Length = 313
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 89/317 (28%), Positives = 159/317 (50%), Gaps = 12/317 (3%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M + +++FMGT +F+ L+ L+ S + +++V TQP R G R + ++ V + A E+
Sbjct: 1 MKMMKIIFMGTPDFSATVLKGLLDSGQYEVLAVVTQPDRAVG-RKREIRMTPVKELALEY 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP P KL Q + L +V A L + N HASLLP++RG
Sbjct: 60 KLPVYQPEKLAQSSDLEELMNLEADGIVTAAFGQFLPSRLLDSVDFAVNVHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API A++ GD + G+ IM+M K +D G + + PI N L ++L+++ +
Sbjct: 120 GAPIHYALINGDEQAGVTIMEMVKEMDAGDMIASKATPIEETDNVGTLFEKLALIGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + + PQ + +T++ IS E R+++ ++ + N IR + P+P A
Sbjct: 180 LDVLPAYRAGQIIPQPQDPSQVTFSPNISPEEERIDWSKTNRQIFNQIRGMYPWPVAHTL 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +R K+ E+ ++ G G+PG+++ +A +GA+ + +Q AG + I
Sbjct: 240 LQG----QRFKIYEADMMAGSGQPGQILSISKKELVVAAGKGALSLKTVQPAGKPKMAIV 295
Query: 296 DFLL--GCPVIIGCIVG 310
DFL G + +G G
Sbjct: 296 DFLNGLGRSLSLGDTFG 312
>gi|332358058|gb|EGJ35891.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK1056]
Length = 313
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 88/317 (27%), Positives = 158/317 (49%), Gaps = 12/317 (3%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M + +++FMGT +F+ L+ L+ S + +++V TQP R G R + ++ V + A E+
Sbjct: 1 MKMMKIIFMGTPDFSATVLKGLLDSGQYEVLAVVTQPDRAVG-RKREIRMTPVKELALEY 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP P KL Q + L +V L + N HASLLP++RG
Sbjct: 60 KLPVYQPEKLAQSSDLEELMNLEADGIVTVAFGQFLPSRLLDSVDFAVNVHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API A++ GD + G+ IM+M K +D G + + PI N L ++L+++ +
Sbjct: 120 GAPIHYALINGDEQAGVTIMEMVKEMDAGDMIASKATPIEETDNVGTLFEKLALIGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + + PQ + +T++ IS E R+++ ++ + N IR + P+P A
Sbjct: 180 LDVLPAYRAGQIIPQPQDPSQVTFSPNISPEEERIDWSKTNRQIFNQIRGMYPWPVAHTL 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +R K+ E+ ++ G G+PG+++ +A +GA+ + +Q AG + I
Sbjct: 240 LQG----QRFKIYEADMMAGSGQPGQILSISKKELVVAAGKGALSLKTVQPAGKPKMAIV 295
Query: 296 DFLL--GCPVIIGCIVG 310
DFL G + +G G
Sbjct: 296 DFLNGLGRSLSLGDTFG 312
>gi|240138196|ref|YP_002962668.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Methylobacterium extorquens AM1]
gi|240008165|gb|ACS39391.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Methylobacterium extorquens AM1]
Length = 309
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 144/310 (46%), Positives = 196/310 (63%), Gaps = 3/310 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV TL L + H+I +VYT+ P AG RG+ LS VH +A+ LP
Sbjct: 1 MRIVFMGTPDFAVPTLDRLHADGHTIAAVYTRAPARAG-RGMALKLSPVHARAEALGLPV 59
Query: 63 LVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L PT L EE + + ++VAVVVAYG+++PQRIL+ + G N H SLLPRWRGAAP
Sbjct: 60 LTPTTLKSEEAAETFAGHGSEVAVVVAYGMLLPQRILDLPRFGCLNLHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+MAGD E+G+ +M+M+ LDTGPVA +VPIS +N L L L A M A
Sbjct: 120 IQRAVMAGDAESGVGVMRMEAGLDTGPVAMEARVPISEGMNAGELHDALMPLGADLMGRA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE++ L +PQ E G+ YA KI+ E R+++ R A V HI LSPFPGA++E +
Sbjct: 180 IRALERDGLTFTPQAEAGVVYAHKITNEEARIDWSRPAAEVARHINGLSPFPGAYVEADL 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGG-RVLDIGDFLLG 300
G ER+K+L + EG G PG +++ T+AC GAVR++ L+RAG +FL G
Sbjct: 240 GKGLERVKVLRAVTAEGSGAPGTLLDAAGTVACGTGAVRLLELRRAGKGGTASGEEFLRG 299
Query: 301 CPVIIGCIVG 310
+ G +G
Sbjct: 300 ARLAAGARLG 309
>gi|146280417|ref|YP_001170570.1| methionyl-tRNA formyltransferase [Pseudomonas stutzeri A1501]
gi|166215502|sp|A4VFH7|FMT_PSEU5 RecName: Full=Methionyl-tRNA formyltransferase
gi|145568622|gb|ABP77728.1| methionyl-tRNA formyltransferase [Pseudomonas stutzeri A1501]
Length = 314
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 134/315 (42%), Positives = 183/315 (58%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA LQAL+ + SIV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAQHLQALLDAGKSIVAVYTQPDRPAG-RGQKLMPSPVKQLAVQHDIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + + AD+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VLQPQTLRDPAAQAELAALQADLMVVVAYGLILPQAVLDLPRLGCINSHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD+E+G+ +M+M+ LDTGP+ PIS L L++L AHA+V+
Sbjct: 123 PIQRAIEAGDSESGVTVMQMEAGLDTGPMLLKVNTPISDEDTGGSLHDRLALLGAHAVVK 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+D L L Q ++ TYA K+SK E RV++ R A + IRA +P+P +
Sbjct: 183 AVDALAAGTLTPEVQDDSLATYAHKLSKDEARVDWTRPAVELERLIRAFNPWPICHSTL- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +K+ +QL EG G PG ++ T+AC +GA+ + RLQ GG+ L GD
Sbjct: 242 ---NGETLKIHAAQLGEGRGVPGLILDASKAGLTVACGEGALSLTRLQLPGGKPLGFGDL 298
Query: 298 LLGCP--VIIGCIVG 310
G ++G
Sbjct: 299 YNSRREQFAPGLVLG 313
>gi|319424440|gb|ADV52514.1| methionyl-tRNA formyltransferase [Shewanella putrefaciens 200]
Length = 318
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 180/306 (58%), Gaps = 12/306 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQAL++S H+++ VYTQP RPAG RG K S V + A +
Sbjct: 1 MKSLNIIFAGTPDFAARHLQALLNSQHNVIGVYTQPDRPAG-RGKKLTASPVKELAIANN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P L +E +Q L+ D+ VVVAYGL++P+ +L+ +LG N H S+LPRWRG
Sbjct: 60 IPVFQPGSLRKEPAQQELAALNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQRA+ AGD ETG+ IM+MD LDTG + +PI N +A L ++L+ A+
Sbjct: 120 AAPIQRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDNDTSASLYEKLAEQGPIAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++A++ L L Q E YAEK+SK E R+++ +SA+ + +RA +P+P ++ E
Sbjct: 180 LQALEGLTNGTLAAEKQDEALANYAEKLSKEEARLDWNKSAKQLWQEVRAFNPWPVSYFE 239
Query: 239 MMIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
++ IK+ ++ + E PG +I +A + G + ++ +Q G + L+
Sbjct: 240 ----HQGNTIKVWQAHVSETISTAAPGTIISASKRGIEVATADGVLTLLSMQLPGKKPLN 295
Query: 294 IGDFLL 299
+ D L
Sbjct: 296 VADILN 301
>gi|303232033|ref|ZP_07318736.1| methionyl-tRNA formyltransferase [Veillonella atypica
ACS-049-V-Sch6]
gi|302513139|gb|EFL55178.1| methionyl-tRNA formyltransferase [Veillonella atypica
ACS-049-V-Sch6]
Length = 335
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 100/329 (30%), Positives = 164/329 (49%), Gaps = 29/329 (8%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VFMGT +F+V TL+ALV + HSIV VY QP + G RG + + V + A LP
Sbjct: 6 PLRIVFMGTPDFSVPTLRALVEAGHSIVGVYCQPDKQKG-RGKQIQMPPVKEAALSLDLP 64
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ + DV VV+AYG ++P ++ K G N HAS+LP++RGAA
Sbjct: 65 VYQPITLRDDAVQKELIDLAPDVIVVIAYGKILPPWLIRLPKYGCINIHASILPKYRGAA 124
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ GD +TG+ IM MD LDTG + + ++ I N T L + ++ L A +
Sbjct: 125 PIHYAILNGDTKTGVTIMHMDDGLDTGDIIDIAEIDILPNETTGALFERIAELGARTISP 184
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+DK + + +PQ + ++ KI+K +++ + A + N IR L+P PG + +
Sbjct: 185 VLDKWVKGKITATPQDDALASHTSKITKEMGLIDWHQPAHKIVNLIRGLNPAPGCYSFLQ 244
Query: 241 IGNKHERIKLLESQLVEGE--------------------GKPGEVIN--PNFTIACSQ-G 277
+R+K+ +Q+VE PG +++ ++ G
Sbjct: 245 G----KRLKIWSAQMVEITSVNNKMATIFVNNNEISVEFAPPGTIVHTAKGLVVSTGDQG 300
Query: 278 AVRIMRLQRAGGRVLDIGDFLLGCPVIIG 306
+ + +Q + + DF+ G + G
Sbjct: 301 FILLTEVQPENKKRISAQDFINGHQIKGG 329
>gi|221640347|ref|YP_002526609.1| methionyl-tRNA formyltransferase [Rhodobacter sphaeroides KD131]
gi|254789367|sp|B9KML7|FMT_RHOSK RecName: Full=Methionyl-tRNA formyltransferase
gi|221161128|gb|ACM02108.1| Methionyl-tRNA formyltransferase [Rhodobacter sphaeroides KD131]
Length = 302
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 141/307 (45%), Positives = 185/307 (60%), Gaps = 10/307 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMG+ +F+V L+AL + H +V VY QPPRPAG RG K + V +A+E LP
Sbjct: 1 MRLIFMGSPDFSVPVLEALH-AHHEVVCVYCQPPRPAG-RGKKDRPTPVQTRAEELGLPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
PT E +F + A+ AVVVAYGL++PQ IL+A + G N HASLLPRWRGAAP
Sbjct: 59 RHPTSLRTPEAQAEFAALGAEAAVVVAYGLILPQPILDAPERGCLNIHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAI+AGD ETGI IM+M+ LDTGPV K I L LS + A ++ A
Sbjct: 119 IHRAILAGDAETGICIMQMEAGLDTGPVLMCEKTHIGPEETVQDLHDRLSDMGARLILGA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++L PQ + G+TYAEKI+K E +++ R A + IR LSPFPGAW +
Sbjct: 179 L--GALDDLVPCPQPDAGVTYAEKIAKAEAGIDWTRPAAEIDRQIRGLSPFPGAWTLL-- 234
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KLL + EG+G PG V+ P TIAC GAV I QR G R ++ +FL G
Sbjct: 235 --NGERVKLLRCRQAEGQGAPGAVL-PGLTIACGTGAVEITLAQREGKRPMEPEEFLRGF 291
Query: 302 PVIIGCI 308
P+ G
Sbjct: 292 PLPEGSR 298
>gi|153837688|ref|ZP_01990355.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus AQ3810]
gi|260901338|ref|ZP_05909733.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus AQ4037]
gi|149748978|gb|EDM59805.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus AQ3810]
gi|308109873|gb|EFO47413.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus AQ4037]
gi|328471168|gb|EGF42070.1| methionyl-tRNA formyltransferase [Vibrio parahaemolyticus 10329]
Length = 315
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 110/316 (34%), Positives = 176/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H +++VYT P RPAG RG K V + A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEVIAVYTNPDRPAG-RGKKLAAPPVKQLALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYG+++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPESFKSDEAKQELADLNADLMVVVAYGMLLPQAVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI + +A + ++L+ L A+++
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYEKLAELGPEALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K+SK E R+N+ A ++ +RA +P+P + E
Sbjct: 183 CLADIAAGKAVPVKQDDELANYAKKLSKEEARINWNDDAAHIERCVRAFNPWPMSHFEAA 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S++ E + G ++ +A G + + +LQ G + + +
Sbjct: 243 ENS----IKVWQSRVAEQTSDKPAGTIVQADKTGIYVATGNGVLVLEQLQVPGKKAMSVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G ++
Sbjct: 299 DILNSRAAWFEVGTLL 314
>gi|160893329|ref|ZP_02074116.1| hypothetical protein CLOL250_00878 [Clostridium sp. L2-50]
gi|156865021|gb|EDO58452.1| hypothetical protein CLOL250_00878 [Clostridium sp. L2-50]
Length = 317
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 104/318 (32%), Positives = 169/318 (53%), Gaps = 18/318 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +++MGT EFAV LQ +V + H++++ +TQP +P G RG + V +KA +P
Sbjct: 1 MNIIYMGTPEFAVKPLQTIVDAGHNVLACFTQPDKPKG-RGKTLQPTPVKEKALSLDIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K +E + + D VV AYG ++P+ ILN K G N HASLLP++RGAAP
Sbjct: 60 YQPVKLREEENVQIIRDYQPDAIVVAAYGQILPESILNIPKYGCINIHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I+ AI+ G+ E+G+ M M K LDTG + VPI+ L +L+ A ++
Sbjct: 120 IEWAIINGETESGVTTMYMAKGLDTGDMIEKTVVPITDTDTGVTLHDKLADAGAALILST 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ KL + +PQ ++ YA + K + ++F + A ++ IR L P+P A+++M
Sbjct: 180 LTKLADHTAVRTPQDDSLSCYASMLKKEQGELDFTKDAASLERLIRGLQPWPVAYMKM-- 237
Query: 242 GNKHERIKLLESQLVEGEGK---------PGEVI---NPNFTIACSQGAVRIMRLQRAGG 289
+ +++ E+ + E + PG ++ NFT+AC GA+ I +LQ G
Sbjct: 238 --NQKTVRIYEASVCEQTEETLEDGTKIVPGMIVHVTKKNFTVACGSGALTIRKLQPEGK 295
Query: 290 RVLDIGDFLLGCPVIIGC 307
+ +D FL G + G
Sbjct: 296 KPMDCAAFLAGNKLKTGQ 313
>gi|332559344|ref|ZP_08413666.1| methionyl-tRNA formyltransferase [Rhodobacter sphaeroides WS8N]
gi|332277056|gb|EGJ22371.1| methionyl-tRNA formyltransferase [Rhodobacter sphaeroides WS8N]
Length = 302
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 142/307 (46%), Positives = 186/307 (60%), Gaps = 10/307 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMG+ +F+V L+AL + H +V VY QPPRPAG RG K + V +A+E LP
Sbjct: 1 MRLIFMGSPDFSVPVLEALH-AHHEVVCVYCQPPRPAG-RGKKDRPTPVQTRAEELGLPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
PT E +F + A+ AVVVAYGL++PQ IL+A + G N HASLLPRWRGAAP
Sbjct: 59 RHPTSLRTPEAQAEFAALGAEAAVVVAYGLILPQPILDAPERGCLNIHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAI+AGD ETGI IM+M+ LDTGPV K I L LS + A ++ A
Sbjct: 119 IHRAILAGDAETGICIMQMEAGLDTGPVLMCEKTHIGPEETVQDLHDRLSDMGARLILGA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++L PQ + G+TYAEKI+K E +++ R A + IR LSPFPGAW +
Sbjct: 179 L--GALDDLVPCPQPDAGVTYAEKIAKAEAGIDWTRPAAEIDRQIRGLSPFPGAWTLL-- 234
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KLL +L EG+G PG V+ P TIAC GAV I QR G R ++ +FL G
Sbjct: 235 --NGERVKLLRCRLAEGQGAPGAVL-PGLTIACGTGAVEITLAQREGKRPMEQEEFLRGF 291
Query: 302 PVIIGCI 308
P+ G
Sbjct: 292 PLPEGSR 298
>gi|229828533|ref|ZP_04454602.1| hypothetical protein GCWU000342_00597 [Shuttleworthia satelles DSM
14600]
gi|229793127|gb|EEP29241.1| hypothetical protein GCWU000342_00597 [Shuttleworthia satelles DSM
14600]
Length = 340
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 102/344 (29%), Positives = 164/344 (47%), Gaps = 41/344 (11%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV L AL+ + H I V TQP +P G R V + A E +
Sbjct: 1 MKIVFMGTPDFAVEILDALLEAGHEISLVVTQPDKPRG-RKKLLTPPEVKQYATEHGIEV 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ + E L+ DVAVV A+G ++P+ IL +LG N HASLLPR+RGAAP
Sbjct: 60 FQPAKIRRAEAVARLAQYPADVAVVAAFGQILPEEILKMPRLGCVNVHASLLPRYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ GD +G+ M+M LD G + ++P+ + A L L+ + +V
Sbjct: 120 IQWAVLNGDATSGVTTMQMGVGLDDGDILEQEEIPLDPHETGASLFARLAAVSRGLIVRT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ L+ + Q +++ I K R++F R AE + IR L+ +P A+
Sbjct: 180 LEDLDAGRIQPRSQDPGLVSHVGMIRKDMGRLDFSRPAEELERMIRGLNSWPSAFTSYQG 239
Query: 242 GNKHERIKLLESQLVEGEGK--------------------------------PGEV---I 266
E +K+ + ++E E PG++
Sbjct: 240 ----ETLKIWRAGVLEDECPSAEDPRDEEDRRGPDAARVPQAISTIGSSAVCPGKIFALT 295
Query: 267 NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ + C +G +RI LQ+AG +++ DFL G + +G +G
Sbjct: 296 DDAIYVKCGRGLLRIEELQKAGKKMMPAADFLRGHRMEVGQSLG 339
>gi|160896280|ref|YP_001561862.1| methionyl-tRNA formyltransferase [Delftia acidovorans SPH-1]
gi|229487492|sp|A9BS67|FMT_DELAS RecName: Full=Methionyl-tRNA formyltransferase
gi|160361864|gb|ABX33477.1| methionyl-tRNA formyltransferase [Delftia acidovorans SPH-1]
Length = 327
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 119/319 (37%), Positives = 174/319 (54%), Gaps = 13/319 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT EFA L+ L+++ ++ V TQP RPAG RG+K S V + A E +
Sbjct: 1 MRVIFAGTPEFARVALERLLAAGFTVPLVLTQPDRPAG-RGMKLQASPVKQCALEHGIAV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ + ADV VV AYGL++PQ +L+ G N HASLL
Sbjct: 60 AQPRSLRLDGKYPEEAAAARAAIEAAQADVMVVAAYGLILPQWVLDTPPRGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RAI AGD ETG+ IM+MD LDTG + + ++PI+++ TA L +L+ L
Sbjct: 120 PRWRGAAPIHRAIEAGDAETGVTIMQMDAGLDTGDMCLVERLPITADDTTASLHDKLADL 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+VEA++ LP +PQ G+ YA KI K E+++++ + AE + +RA +PFP
Sbjct: 180 GGRLIVEALEMSACGGLPRTPQPAEGVNYAHKIEKAESQIDWRQDAEAIARRLRAFNPFP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGR 290
G + + + + G PG V++ +AC G + + LQRAGG+
Sbjct: 240 GGATQYGDESIKVWEAHADPAIAVGTAAPGTVLSAGADGVRVACGNGVLCMTLLQRAGGK 299
Query: 291 VLDIGDFLLGCPVIIGCIV 309
L GDFL G + G ++
Sbjct: 300 RLAAGDFLRGFDLPEGAVL 318
>gi|121602824|ref|YP_989568.1| methionyl-tRNA formyltransferase [Bartonella bacilliformis KC583]
gi|166214875|sp|A1UUB5|FMT_BARBK RecName: Full=Methionyl-tRNA formyltransferase
gi|120615001|gb|ABM45602.1| methionyl-tRNA formyltransferase [Bartonella bacilliformis KC583]
Length = 309
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 153/307 (49%), Positives = 204/307 (66%), Gaps = 2/307 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LR+ FMGT +FAV L AL+++ H IV+VY+QPPRPAGRRGL+ V S V A+ S+
Sbjct: 1 MALRLSFMGTPDFAVPVLHALLNAGHDIVAVYSQPPRPAGRRGLQLVSSPVQNAAEAKSI 60
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P EE +F + + D AVVVAYG+++P+ IL A + G +N HASLLPRWRGA
Sbjct: 61 PVFTPQSLKTAEEQARFAALSVDAAVVVAYGILLPKAILEAPRFGCFNAHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD ETG+ IM+M++ LDTGP+A R + I+ NI A L +LS + A +V
Sbjct: 121 APIQRAIMAGDKETGMMIMQMNEGLDTGPIALSRSIAITENITAAELSDKLSHMGAELIV 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EA+ LE+ L L+PQ G++YA KI K ET++++ +SAE +H +I ALSP+PG W M
Sbjct: 181 EALSALEKGQLTLTPQSLEGVSYASKIKKEETQIDWTKSAEVIHKYICALSPYPGCWCTM 240
Query: 240 MIGNKHERIKLLESQLVEGEGK-PGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
IG K ER+K+L S+L G+ G + + I C QG + I LQRAG R+LD FL
Sbjct: 241 TIGGKPERVKILGSRLATGDSLGIGRIEAGHLIIHCGQGRIEITHLQRAGSRILDSSTFL 300
Query: 299 LGCPVII 305
G +
Sbjct: 301 RGANISA 307
>gi|89895439|ref|YP_518926.1| hypothetical protein DSY2693 [Desulfitobacterium hafniense Y51]
gi|89334887|dbj|BAE84482.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 320
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 114/325 (35%), Positives = 175/325 (53%), Gaps = 24/325 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV TLQAL + H + V+TQP RP+G RG S V AQE LP
Sbjct: 1 MRLVFMGTPDFAVPTLQALAAHGHDVAGVFTQPDRPSG-RGKNLKPSPVKAAAQELGLPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ E + L +V +VVAYG ++ + IL G N HASLLP WRGAAP
Sbjct: 60 YQPHKVKSPESLEILKELIPEVIIVVAYGQLLSKEILELPPYGCINVHASLLPDWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I +I+ GD TG+ M+MD+ LDTG + ++PI + T L +L+ A ++
Sbjct: 120 IHWSILEGDQRTGVTTMQMDEGLDTGDMLLKAELPIGEDTTTGELHDDLAQAGAQLLIAT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+++L + LP +PQ + YA +++ ++++ RSA+ +HN IR L+P+PG++
Sbjct: 180 LEQLRKGELPRTPQKG-PVRYASLLTREHEKIDWARSAQAIHNQIRGLNPWPGSYTLF-- 236
Query: 242 GNKHERIKLLESQLVEGEG--------------KPGEVI---NPNFTIACSQGAVRIMRL 284
+ E +K+ +S++ EG +PGE+I + +G +RI +
Sbjct: 237 --REETVKVWKSRVSGEEGGSEAEPNRLALKDARPGEIIAWDQQGLLVQTGEGLIRIAEV 294
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
Q AG + + DF LG +G
Sbjct: 295 QPAGKKPMPARDFFLGRHGQVGECF 319
>gi|163851062|ref|YP_001639105.1| methionyl-tRNA formyltransferase [Methylobacterium extorquens PA1]
gi|163662667|gb|ABY30034.1| methionyl-tRNA formyltransferase [Methylobacterium extorquens PA1]
Length = 309
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 143/310 (46%), Positives = 193/310 (62%), Gaps = 3/310 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV TL L + H+I +VYT+ P AG RG+ LS VH +A+ LP
Sbjct: 1 MRIVFMGTPDFAVPTLDRLHADGHTIAAVYTRAPARAG-RGMALKLSPVHARAEALGLPV 59
Query: 63 LVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L PT L EE + + ADVAVVVAYG+++PQRIL+ + G N H SLLPRWRGAAP
Sbjct: 60 LTPTTLKSEEAAETFAGHGADVAVVVAYGMLLPQRILDLPRFGCLNLHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+MAGD E+G+ +M+M+ LDTGPVA ++ I+ + L L L A M A
Sbjct: 120 IQRAVMAGDAESGVGVMRMEAGLDTGPVAMEARLAITEGMTAGELHDALMPLGADLMGRA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LEQ+ L +PQ E G+ YA KI+ E R+++ R A V HI LSPFPGA++E +
Sbjct: 180 IRALEQDGLTFTPQAEEGVVYAHKITNEEARIDWSRPAAEVARHINGLSPFPGAYVEADL 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGG-RVLDIGDFLLG 300
G ER+K+L + EG G PG +++ T+AC GAVR++ L+RAG FL G
Sbjct: 240 GKGPERVKVLRAVTAEGSGAPGTLLDAAGTVACGTGAVRLLELRRAGKGGTASGEAFLRG 299
Query: 301 CPVIIGCIVG 310
+ G +G
Sbjct: 300 ARLAAGARLG 309
>gi|291296559|ref|YP_003507957.1| methionyl-tRNA formyltransferase [Meiothermus ruber DSM 1279]
gi|290471518|gb|ADD28937.1| methionyl-tRNA formyltransferase [Meiothermus ruber DSM 1279]
Length = 318
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 96/313 (30%), Positives = 156/313 (49%), Gaps = 15/313 (4%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
RV F G+ +AV L+AL H +V V TQP +PAG RGLK V A+ L
Sbjct: 15 RVAFFGSPAWAVPVLEALYQ-QHQVVLVVTQPDKPAG-RGLKLTPCPVAAWAEARGLRVE 72
Query: 64 VPTKLGQEEYEQ--FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P +L + F +VAV AYG ++P +L + GF N H S LP++RG AP
Sbjct: 73 KPARLRKNLEFTELFREIAPEVAVTAAYGKILPAELLAIPRFGFLNLHPSDLPKYRGPAP 132
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q ++ G+ ET + IM+ D +DTGPV + P+ + L L ++EA
Sbjct: 133 VQWTLIHGETETAVCIMQTDVGMDTGPVVARWRTPVGPDETAVELSNRLRDKGIELLLEA 192
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE P T+A + K + ++ + RSA+ ++N R + P+PG+W E
Sbjct: 193 LADLEHLQPQPQP---ALGTHAPMLQKDDGKIVWERSADEIYNRHRGVQPWPGSWFE--- 246
Query: 242 GNKHERIKLLESQ--LVEGEGKPGEVIN--PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ R+K+L+ +E +PG V++ +A QG++ + +Q G + + D+
Sbjct: 247 -HRGRRVKVLQMSRGPLEQILEPGTVLHIADGLMVAAGQGSLLLKEVQPEGKKPMPAADW 305
Query: 298 LLGCPVIIGCIVG 310
G + +G +G
Sbjct: 306 ARGARLRVGDRLG 318
>gi|310659159|ref|YP_003936880.1| 10-formyltetrahydrofolate:l-methionyl-tRNA(fmet)
n-formyltransferase [Clostridium sticklandii DSM 519]
gi|308825937|emb|CBH21975.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Clostridium sticklandii]
Length = 313
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 100/316 (31%), Positives = 164/316 (51%), Gaps = 11/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M ++ +FMGT EFA+ + +AL S I V TQP RP G RG K V A E +
Sbjct: 1 MQMKAIFMGTPEFAIPSFEALYESDFEIALVVTQPDRPKG-RGKKLSSPPVKLVALEHDI 59
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ E + + D+ +VVA+G ++P+ IL K G N HASLLP++RGA
Sbjct: 60 EVFQPERIKDSEAIEKIKQVKPDLIIVVAFGQILPKEILELPKYGCINVHASLLPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G+ +TG+ M M++ LDTG + +V I+ + L +L++ +
Sbjct: 120 APINFAIINGEKKTGVTTMYMEEGLDTGDMLLKNEVEITPEDTASTLHDKLAIAGKKTLA 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + L Q ++ YA ++K ++N+ RSAE++ N +R P+P A+
Sbjct: 180 DTLKAIINTELVPEKQDDSISNYAPIMTKELGKINWNRSAESISNLVRGTDPWPSAYTLY 239
Query: 240 MIGNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
KL +++ + KPG +I + IA + VRI +Q +G + + +
Sbjct: 240 DSA----VFKLFAPVVLDKQSKEKPGTIIAVSSEGIDIASADYIVRIKEIQISGKKRMPV 295
Query: 295 GDFLLGCPVIIGCIVG 310
G+FL G + IG ++G
Sbjct: 296 GEFLKGNVLEIGKVLG 311
>gi|332981563|ref|YP_004463004.1| methionyl-tRNA formyltransferase [Mahella australiensis 50-1 BON]
gi|332699241|gb|AEE96182.1| methionyl-tRNA formyltransferase [Mahella australiensis 50-1 BON]
Length = 310
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 98/314 (31%), Positives = 171/314 (54%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT EFAVA+L+A++ H +V V TQP +P G RG + V + A + +
Sbjct: 1 MKIVFMGTPEFAVASLEAILEQGHEVVCVVTQPDKPKG-RGGRLASPPVKEVAVQRGIQV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ + + + + D+ VV A+G ++P+ +L+ G N HASLLP++RGAAP
Sbjct: 60 YQPPRIRETNFVERLRNIKPDIIVVTAFGQILPKSVLDIPPKGCINVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ AI+ G+++TGI M MD+ +DTG + R + I + L L+VL + +
Sbjct: 120 IQFAIINGESQTGITTMYMDEGMDTGDMILQRAIDIHPDETAGQLHDRLAVLSKDVLKDT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +EQ P Q +N TY K++K +N+ + V+N IR ++P+PGA+
Sbjct: 180 LVLIEQGRAPRIKQNDNEATYCSKLTKEMGHINWNADVKTVYNLIRGVTPWPGAYAFYED 239
Query: 242 GNKHERIKLLESQLVE--GEGKPGEVINP----NFTIACSQGAVRIMRLQRAGGRVLDIG 295
IK+ +++V + PG++++ I C G V + +Q+ + ++I
Sbjct: 240 TM----IKIWHARIVSDYKDALPGQIVDIHREYGIIIKCENGCVAVDEVQQQNKKRMNIE 295
Query: 296 DFLLGCPVIIGCIV 309
++L G + IG ++
Sbjct: 296 EYLRGHKIEIGTML 309
>gi|322392344|ref|ZP_08065805.1| methionyl-tRNA formyltransferase [Streptococcus peroris ATCC
700780]
gi|321144879|gb|EFX40279.1| methionyl-tRNA formyltransferase [Streptococcus peroris ATCC
700780]
Length = 311
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 95/316 (30%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + IV+V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEIVAVVTQPDRAVG-RKKVIHETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + +V A L + N HASLLP+ RG
Sbjct: 59 LPIYQPEKLSGSPEMEAIMNLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDKEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLAIVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ + +T++ I E ++++ ++ + N IR L+P+P A +
Sbjct: 179 DTLPAYIAGEIQPQPQDPSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGLNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
ER K+ E+ VEG G PGE++ IA ++GA+ + ++Q AG +DI
Sbjct: 239 KG----ERFKIYEALPVEGNGNPGEILSIGKKELIIATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRSLAVGVRFG 310
>gi|91226302|ref|ZP_01261142.1| methionyl-tRNA formyltransferase [Vibrio alginolyticus 12G01]
gi|91189313|gb|EAS75592.1| methionyl-tRNA formyltransferase [Vibrio alginolyticus 12G01]
Length = 315
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 110/316 (34%), Positives = 176/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H +++VYT P RPAG RG K V + A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEVIAVYTNPDRPAG-RGKKLAAPPVKQLALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYG+++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPESFKSDEAKQELADLNADLMVVVAYGMLLPQAVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI + +A + ++L+ L A+++
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYEKLAELGPEALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K+SK E R+N+ A ++ +RA +P+P + E
Sbjct: 183 CLVDIAAGKAVPVKQDDELANYAKKLSKEEARINWNDDAAHIERCVRAFNPWPMSHFEAA 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S++ E + G ++ +A G + + +LQ G + + +
Sbjct: 243 ENS----IKVWQSRVAEQTSDKPAGTIVQADKTGIYVATGNGVLVLEQLQVPGKKAMSVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G ++
Sbjct: 299 DILNSRAAWFEVGTLL 314
>gi|294638021|ref|ZP_06716281.1| methionyl-tRNA formyltransferase [Edwardsiella tarda ATCC 23685]
gi|291088813|gb|EFE21374.1| methionyl-tRNA formyltransferase [Edwardsiella tarda ATCC 23685]
Length = 315
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 176/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+ S H IV V+TQP RPAG RG K S V A++ +LP
Sbjct: 4 SLRIIFAGTPDFAARHLAALLGSEHQIVGVFTQPDRPAG-RGNKLTPSPVKALAEQHALP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E +Q ++ DV VVVAYGL++PQ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPASLRPAENQQLVADLQADVMVVVAYGLILPQAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ IM+MD LDTG + PI+ +A L +L+ L ++
Sbjct: 123 PIQRALWAGDAETGVTIMQMDAGLDTGAMLLKLACPITQEDTSATLYDKLAELGPQGLLT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L Q + YAEK+SK E R+++ AE + +RA +P+P ++ +
Sbjct: 183 TLAQLADGRAQAQQQDDALACYAEKLSKEEARLDWQLPAEQLARCVRAFNPWPVSFFMLE 242
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ + ++ E + +PG ++ +A +QG + + +LQ AG + +
Sbjct: 243 G----QPVKVWGANVLHQESDAQPGTIVGADKQGIAVATAQGILLLTQLQPAGKKSMAAR 298
Query: 296 DFLLGCP--VIIGCIV 309
D L + G ++
Sbjct: 299 DLLNSRKESFLAGTLL 314
>gi|307264800|ref|ZP_07546362.1| methionyl-tRNA formyltransferase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306920058|gb|EFN50270.1| methionyl-tRNA formyltransferase [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 310
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 106/313 (33%), Positives = 170/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L++VFMGT +FAV +LQ L + + +V TQP + G RG+K S V + A + +
Sbjct: 2 LKIVFMGTPDFAVPSLQKLFEEGYDVAAVVTQPDKQKG-RGMKLSFSPVKEVALQKGVEI 60
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K+ N DV VV AYG ++P+ +L K G N HASLLP++RGAA
Sbjct: 61 LQPEKIKNNPEFLNRLKEINPDVIVVAAYGKILPEEVLTLPKYGCINVHASLLPKYRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ ETGI M MDK LDTG + + +PI + L +LS L A ++E
Sbjct: 121 PINWAIINGEKETGITTMLMDKGLDTGDMLIKKSIPILDKDDAETLHYKLSRLGAEVLIE 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ LEQ L Q E +Y+ ++K +++ ++AE + N IR + P+PG +
Sbjct: 181 TLKALEQGTLLPVKQREEEASYSPILTKEMGHIDWNKTAEEIRNLIRGMKPWPGCYTFYG 240
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ + ++VE G + G V+ + + C + A++I+ +Q+ G + + I +
Sbjct: 241 D----KMLKIWKGEIVEYNGNEENGTVLKSKGDLIVKCGKDALKIVEIQQEGSKKMGISE 296
Query: 297 FLLGCPVIIGCIV 309
+L+G + G I
Sbjct: 297 YLIGHNIPEGTIF 309
>gi|85060225|ref|YP_455927.1| methionyl-tRNA formyltransferase [Sodalis glossinidius str.
'morsitans']
gi|123766384|sp|Q2NQQ3|FMT_SODGM RecName: Full=Methionyl-tRNA formyltransferase
gi|84780745|dbj|BAE75522.1| methionyl-tRNA formyltransferase [Sodalis glossinidius str.
'morsitans']
Length = 316
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 109/317 (34%), Positives = 167/317 (52%), Gaps = 14/317 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+ + +V V+TQP RPAG RG + S V + A+ LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALIDAKQQVVGVFTQPDRPAG-RGNRLTPSPVKELAERHDLP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E NAD+ VVVAYGL++PQ +L+ LG N H SLLPRWRGAA
Sbjct: 63 VFQPASLRKPEGQRSVAELNADIMVVVAYGLILPQAVLDLPLLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD+ TG+ IM+MD LDTG + I + +A L +L+ + +A++
Sbjct: 123 PIQRALWAGDDRTGVTIMQMDAGLDTGAMLHKAVCAIQHDDTSASLYDKLAQIGPNALLS 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ Q TYA+K+SK E R+++ A + IRA +P+P ++ +
Sbjct: 183 TLTQIAAGRAVAESQDNALATYADKLSKEEARLDWRLPAAQLERCIRAFNPWPISYFSLA 242
Query: 241 IGNKHERIKLLESQLVEG---EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ IK+ + + +G PG ++ IA G + + +LQ AG + + +
Sbjct: 243 E----QPIKVWAAGVDDGQTSSHAPGTILAADKAGIHIATGAGVLTLTQLQPAGKKAMSV 298
Query: 295 GDFLLGCP--VIIGCIV 309
D L I G ++
Sbjct: 299 QDLLNSRRESFIPGTVL 315
>gi|269967000|ref|ZP_06181070.1| methionyl-tRNA formyltransferase [Vibrio alginolyticus 40B]
gi|269828394|gb|EEZ82658.1| methionyl-tRNA formyltransferase [Vibrio alginolyticus 40B]
Length = 315
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 109/316 (34%), Positives = 176/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H +++VYT P RPAG RG K V + A + ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEVIAVYTNPDRPAG-RGKKLAAPPVKQLALKHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYG+++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPESFKSDEAKQELADLNADLMVVVAYGMLLPQAVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI + +A + ++L+ L A+++
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYEKLAELGPEALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K+SK E R+N+ A ++ +RA +P+P + E
Sbjct: 183 CLVDIAAGKAVPVKQDDELANYAKKLSKEEARINWNDDAAHIERCVRAFNPWPMSHFEAA 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S++ E + G ++ +A G + + +LQ G + + +
Sbjct: 243 ENS----IKVWQSRVAEQTSDKPAGTIVQADKTGIYVATGNGVLVLEQLQVPGKKAMSVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G ++
Sbjct: 299 DILNSRAAWFEVGTLL 314
>gi|120596856|ref|YP_961430.1| methionyl-tRNA formyltransferase [Shewanella sp. W3-18-1]
gi|166215514|sp|A1RDX6|FMT_SHESW RecName: Full=Methionyl-tRNA formyltransferase
gi|120556949|gb|ABM22876.1| methionyl-tRNA formyltransferase [Shewanella sp. W3-18-1]
Length = 318
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 177/306 (57%), Gaps = 12/306 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQAL++S H+++ VYTQP RPAG RG K S V + A +
Sbjct: 1 MKSLNIIFAGTPDFAARHLQALLNSQHNVIGVYTQPDRPAG-RGKKLTASPVKELAVANN 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P + + + NAD+ VVVAYGL++P+ +L+ +LG N H S+LPRWRG
Sbjct: 60 IPVYQPGSLRKEPAQQALAALNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQRA+ AGD ETG+ +M+MD LDTG + +PI + +A L ++L+ A+
Sbjct: 120 AAPIQRALWAGDKETGVTVMQMDVGLDTGDMLLKTYLPIEDSDTSASLYEKLAEQGPVAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++A+ L L Q E YAEK+SK E R+++ +SA+ + +RA +P+P ++ E
Sbjct: 180 LQALKGLANGTLAAEKQDEALANYAEKLSKEEARLDWNKSAKQLWQEVRAFNPWPVSYFE 239
Query: 239 MMIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
++ IK+ ++ + E PG +I +A + G + ++ +Q G + L+
Sbjct: 240 ----HQGNTIKVWQAHVSETISTAAPGTIISASKRGIEVATADGVLTLLSMQLPGKKPLN 295
Query: 294 IGDFLL 299
+ D L
Sbjct: 296 VADILN 301
>gi|146276208|ref|YP_001166367.1| methionyl-tRNA formyltransferase [Rhodobacter sphaeroides ATCC
17025]
gi|166215505|sp|A4WNU8|FMT_RHOS5 RecName: Full=Methionyl-tRNA formyltransferase
gi|145554449|gb|ABP69062.1| methionyl-tRNA formyltransferase [Rhodobacter sphaeroides ATCC
17025]
Length = 302
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 142/306 (46%), Positives = 184/306 (60%), Gaps = 10/306 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMG+ +F+V L+AL + H +V VY QPPRPAG RG K + V +A+E LP
Sbjct: 1 MRVVFMGSPDFSVPVLEALH-AHHEVVCVYCQPPRPAG-RGKKDRPTPVQARAEELGLPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E F + A+VAVVVAYGL++PQ IL+A G N HASLLPRWRGAAP
Sbjct: 59 RHPKSLRTPEVQADFAALGAEVAVVVAYGLILPQPILDAPDRGCLNIHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAI+AGD+ETGI IM+M+ LDTGPV K I + L LS + A ++ A
Sbjct: 119 IHRAILAGDDETGICIMQMEAGLDTGPVLMCEKTHIGAEDTVQDLHDRLSGMGARLILGA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ L+ PQ E G+TYAEKI+K E +++ R A + IR LSPFPGAW +
Sbjct: 179 IEALDDLVPQ--PQPEEGVTYAEKIAKAEAGIDWSRPAAEIDRQIRGLSPFPGAWTMLGG 236
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KLL +L EG+G PGE++ IAC GAV I QR G R ++ +FL G
Sbjct: 237 ----ERVKLLRCRLAEGQGAPGELL-EGLVIACGSGAVEITLAQREGKRPMERDEFLRGF 291
Query: 302 PVIIGC 307
+ G
Sbjct: 292 ALPRGS 297
>gi|163803317|ref|ZP_02197195.1| methionyl-tRNA formyltransferase [Vibrio sp. AND4]
gi|159172887|gb|EDP57726.1| methionyl-tRNA formyltransferase [Vibrio sp. AND4]
Length = 315
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 112/316 (35%), Positives = 174/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E +P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKTIALEHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + +Q L+ D+ VVVAYGL++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDHAKQELADLNADIMVVVAYGLLLPQVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI ++ +A + ++L+ L A++E
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEASDTSASMYEKLAGLGPDALIE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K+SK E R+N+ A ++ +RA +P+P + E
Sbjct: 183 CLADIATGKAEPVKQDDEQANYAKKLSKEEARINWNDDAAHIERCVRAFNPWPMSHFETA 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S++ E + G ++ + G + + +LQ G + + +
Sbjct: 243 ENS----IKVWQSRVEEQTSDKPAGTILQADKTGIYVVTGNGVLVLEQLQVPGKKAMSVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G +
Sbjct: 299 DILNSRASWFEVGTQL 314
>gi|30021954|ref|NP_833585.1| methionyl-tRNA formyltransferase [Bacillus cereus ATCC 14579]
gi|33516849|sp|Q819U1|FMT_BACCR RecName: Full=Methionyl-tRNA formyltransferase
gi|29897510|gb|AAP10786.1| Methionyl-tRNA formyltransferase [Bacillus cereus ATCC 14579]
Length = 314
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 105/313 (33%), Positives = 161/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F V L+ L+ + +V V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFTVPVLRRLIEDGYEVVGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E + + G ++ F +A S V+I LQ +G + + F
Sbjct: 240 -GQVVKVWWGEKVPITEPAEAGTIVAIEEDGFVVATSNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|110832991|ref|YP_691850.1| methionyl-tRNA formyltransferase [Alcanivorax borkumensis SK2]
gi|122959727|sp|Q0VTE2|FMT_ALCBS RecName: Full=Methionyl-tRNA formyltransferase
gi|110646102|emb|CAL15578.1| methionyl-tRNA formyltransferase [Alcanivorax borkumensis SK2]
Length = 330
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 121/315 (38%), Positives = 171/315 (54%), Gaps = 7/315 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+ F GT +FA A+LQA++ + H +V+V TQP R AG RG K S V + A +
Sbjct: 3 PLRLAFAGTPDFAAASLQAVLDNGHQVVAVLTQPDRAAG-RGKKLQQSPVKQLAHSQGIT 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P G+ ++Q N D VVVAYGL+IPQ +L+ +LG N H SLLPRWRGAA
Sbjct: 62 VLQPENLKGEAIHQQLRDLNLDALVVVAYGLIIPQAVLDMPRLGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG IM+M+ LDTGP+ +PI + L L+ A +V
Sbjct: 122 PIQRAITAGDTETGNTIMQMEAGLDTGPMLLSESLPIGDSETGGELHDRLAAQGARLLVT 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ LE+ +PQ + GITYA K+SK E R++F ++N IRA +PFP +W+ +
Sbjct: 182 VLQDLEKYLANATPQPDEGITYAHKLSKAEARLDFRLPTGALYNRIRAFNPFPVSWVPLN 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
Q + +PG ++ + +A G++ + LQ G R + + D
Sbjct: 242 GQPMRIWRASESPQPAQANDEPGYILSVDDQGIHVATGDGSLILEELQLPGKRRMAVSDL 301
Query: 298 LLGCP--VIIGCIVG 310
L G P +G +G
Sbjct: 302 LRGNPTLFSVGEPLG 316
>gi|160880623|ref|YP_001559591.1| methionyl-tRNA formyltransferase [Clostridium phytofermentans ISDg]
gi|160429289|gb|ABX42852.1| methionyl-tRNA formyltransferase [Clostridium phytofermentans ISDg]
Length = 319
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 91/320 (28%), Positives = 162/320 (50%), Gaps = 17/320 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V+MGT E A L+ L+SS I+ V TQP +P G RG + V + A + +P
Sbjct: 1 MKAVYMGTPEIAATILETLLSSDIEIIGVVTQPDKPKG-RGKEMAFPPVKEVALKHQIPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ + E+ + L D+ +V A+G ++ + IL G N HASLLP++RG+AP
Sbjct: 60 YQPRRVKEPEFVEQLKALAPDIILVAAFGQILSKDILELPPFGCINVHASLLPKYRGSAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ I+ G+ +TG+ IMKMD DTG + +++ I+ L +L+V+ A++E
Sbjct: 120 IQWVILNGEEKTGVTIMKMDVGCDTGDMILKKEIDITKEETGGSLHDKLAVIGGDALLEG 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ ++ + Q ++ TY + +SK +++F + A+++ IR L+P+P A+
Sbjct: 180 IELIKNGTATYTKQDDSNSTYIKMLSKEMGKIDFSKDADSIERMIRGLNPWPSAYTYYKG 239
Query: 242 GNKHERIKLLESQLVEGE-----------GKPGEVINPNFTIACSQGAVRIMRLQRAGGR 290
+ +KL +++ G V + ++I LQ G +
Sbjct: 240 ----KTLKLWSAEVSHDPDIIKDAEEAEFGSIVRVTKEAIFVKTGDKLLKINELQLEGKK 295
Query: 291 VLDIGDFLLGCPVIIGCIVG 310
+ G+FL G + G I+G
Sbjct: 296 KMLAGEFLRGYQINAGDILG 315
>gi|254291094|ref|ZP_04961891.1| methionyl-tRNA formyltransferase [Vibrio cholerae AM-19226]
gi|150422939|gb|EDN14889.1| methionyl-tRNA formyltransferase [Vibrio cholerae AM-19226]
Length = 315
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 118/314 (37%), Positives = 176/314 (56%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAG-RGKKLTASPVKTLALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ IM+MD LDTG + + +PI ++ +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ + Q Q + YA K+SK E R+N+ A ++ IRA +P+P + E+
Sbjct: 183 CLEDIAQGTAVAVKQDDALANYAHKLSKEEARINWNDEAAHIERCIRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E+Q V PG ++ +A QG + + LQ G + L + D
Sbjct: 243 ENSIKVWQARVETQAV--TQAPGTIVQADKSGIYVATGQGVLVLESLQIPGKKALPVQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNARADWFSVGSQL 314
>gi|297617046|ref|YP_003702205.1| methionyl-tRNA formyltransferase [Syntrophothermus lipocalidus DSM
12680]
gi|297144883|gb|ADI01640.1| methionyl-tRNA formyltransferase [Syntrophothermus lipocalidus DSM
12680]
Length = 315
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 114/315 (36%), Positives = 173/315 (54%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT+EFAV +L L+ + H + V TQP RP G RG + S V A+EF +
Sbjct: 1 MRIVFMGTAEFAVPSLYRLIMAGHDVALVVTQPDRPRG-RGKRVASSPVKLLAEEFGVRL 59
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ EE + S + D+ VVVAYG ++P ++L G N H SLLPR+RGAAP
Sbjct: 60 FQPERIKDEESIKTIKSCDPDLIVVVAYGQILPSKLLYHPPFGCVNLHGSLLPRYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAG+ G+ M M++ +D G + + V IS + + QELS + ++E
Sbjct: 120 IQRAIMAGERVVGVTTMYMNESMDGGDIILQKSVEISDDATFGEVYQELSEIGGDLLLET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D++ P PQ ++ TYA I + +++ R A + N IRAL+P PGA +
Sbjct: 180 VDQIGWGTAPRIPQDDSRATYAPVIRAEDEVIDWRREAREISNQIRALNPQPGASTTL-- 237
Query: 242 GNKHERIKLLESQLVEGEGK--PGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
R+K S+++E E PG+V+ F + +G + I+ +QR G + L
Sbjct: 238 --DGVRLKFFRSRVLEDEADALPGQVVQVIDEEGFIVQTGKGQLVILEVQREGKKRLPAS 295
Query: 296 DFLLGCPVIIGCIVG 310
+F+ G V G I+G
Sbjct: 296 EFIKGYRVTPGLILG 310
>gi|164687802|ref|ZP_02211830.1| hypothetical protein CLOBAR_01446 [Clostridium bartlettii DSM
16795]
gi|164603077|gb|EDQ96542.1| hypothetical protein CLOBAR_01446 [Clostridium bartlettii DSM
16795]
Length = 304
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 94/308 (30%), Positives = 161/308 (52%), Gaps = 11/308 (3%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT + A LQ L+ + I+ V TQP + G RG K V S V + A E +LP P K
Sbjct: 1 MGTPDIASGCLQELIDKKYDIIGVVTQPDKQVG-RGKKIVFSPVKQVAIENNLPVYQPIK 59
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
+ + N DV VVVAYG ++ + L K G N H SLLP++RGAAPI I
Sbjct: 60 AKEESFVNEIKELNPDVIVVVAYGQILSKEFLEIPKQGCINVHVSLLPKYRGAAPINWVI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ G+ +TG++ M MD+ LDTG V + + I L +++V A + E +D ++
Sbjct: 120 INGEEKTGVSTMFMDEGLDTGDVILQSEFALDDEITAGELHDKMTVEGAKVLCETLDLIK 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ P +PQ + TYA + K V+F ++A VHN +R ++P+P A+ M +
Sbjct: 180 EGKAPRTPQNHDEFTYAPIMDKNLGHVDFSKTAREVHNLVRGVNPWPSAYTMYMD----K 235
Query: 247 RIKLLESQLVEGEG--KPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
++K+ +++++ + +PG ++ +A + I +Q + +++ +F+ G
Sbjct: 236 KMKVWKTKVLNEKSSKEPGTILKVDQEGIKVATKDNVILISEIQMPNKKRMEVKEFIKGN 295
Query: 302 PVIIGCIV 309
+ +G ++
Sbjct: 296 TLEVGNVL 303
>gi|332653343|ref|ZP_08419088.1| methionyl-tRNA formyltransferase [Ruminococcaceae bacterium D16]
gi|332518489|gb|EGJ48092.1| methionyl-tRNA formyltransferase [Ruminococcaceae bacterium D16]
Length = 307
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 103/309 (33%), Positives = 160/309 (51%), Gaps = 7/309 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV +L+ALV++ H + V+ QP +P GR K AV AQ +P
Sbjct: 1 MRIVFMGTPDFAVPSLEALVAAGHEVCGVFCQPDKPVGRHQNKLQPPAVKVCAQSHDIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
PTK Q N ++ VV AYG ++P IL G N H+SLLP++RGAAP
Sbjct: 61 FQPTKLRDGTALAQLQELNPELIVVAAYGRILPDDILALPPKGCINVHSSLLPKYRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ GD ETG+ IM M LD G + K PI + N + L+ L +V+
Sbjct: 121 INWAVVNGDKETGVTIMHMATELDAGDIIDQVKTPIDPDENVEAVHDRLAQLGGELLVKV 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + +PQ + T A +S+ + +++ RSA+ +HN +R L+P+P +++
Sbjct: 181 VADIAAGTAKRTPQDHSQATLAPMLSRALSPIDWSRSAKEIHNQVRGLTPWPATSTDIL- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDF 297
++ +E +E PG VI +AC G +R+ +Q G R + ++
Sbjct: 240 -GDTIKVFAVEEPGIETGKAPGTVIAANKAGIDVACGDGKVIRLTEIQAPGSRRMSAANY 298
Query: 298 LLGCPVIIG 306
L G PV +G
Sbjct: 299 LAGHPVTVG 307
>gi|217971246|ref|YP_002355997.1| methionyl-tRNA formyltransferase [Shewanella baltica OS223]
gi|254789369|sp|B8E3S3|FMT_SHEB2 RecName: Full=Methionyl-tRNA formyltransferase
gi|217496381|gb|ACK44574.1| methionyl-tRNA formyltransferase [Shewanella baltica OS223]
Length = 318
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 180/304 (59%), Gaps = 11/304 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL++S H+++ VYTQP RPAG RG K S V + A ++P
Sbjct: 3 PLNIIFAGTPDFAARHLQALLNSHHNVIGVYTQPDRPAG-RGKKLTASPVKELAVANNIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q L+ D+ VVVAYGL++P+ +L+ +LG N H S+LPRWRGAA
Sbjct: 62 VYQPGSLRKEPAQQELAALNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ +M+MD LDTG + +PI + +A L ++L+ A+++
Sbjct: 122 PIQRALWAGDKETGVTVMQMDVGLDTGDMLLKTYLPIEDSDTSASLYEKLAEQGPVALLQ 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ L L Q E YAEK+SK E R+++ +SA+ + +RA +P+P ++ E
Sbjct: 182 ALEGLANGTLAAEKQDEALANYAEKLSKEEARLDWNKSAKQLWQEVRAFNPWPVSYFE-- 239
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++ IK+ ++Q+ E PG +I +A + G + ++ +Q G + L++
Sbjct: 240 --HQGNTIKVWQTQVSETTSTAAPGTIISASKKGIEVATADGVLTLLSMQLPGKKPLNVA 297
Query: 296 DFLL 299
D L
Sbjct: 298 DILN 301
>gi|24371631|ref|NP_715673.1| methionyl-tRNA formyltransferase [Shewanella oneidensis MR-1]
gi|33516867|sp|Q8EKQ9|FMT_SHEON RecName: Full=Methionyl-tRNA formyltransferase
gi|24345387|gb|AAN53118.1|AE015454_12 methionyl-tRNA formyltransferase [Shewanella oneidensis MR-1]
Length = 318
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 111/302 (36%), Positives = 172/302 (56%), Gaps = 7/302 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL++S H++++VYTQP RPAG RG K S V + A S+P
Sbjct: 3 PLNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAG-RGKKLTASPVKELALSHSIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q L+ D+ VVVAYGL++P+ +L+ +LG N H S+LPRWRGAA
Sbjct: 62 VYQPGSLRKEPAQQELASLNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ IM+MD LDTG + +PI + +A L ++L++ A+++
Sbjct: 122 PIQRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSASLYEKLALQGPDALLQ 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ L L Q E YAEK+SK E R+++ +SA + +RA +P+P ++ E
Sbjct: 182 ALEGLANGTLAAEKQDETLANYAEKLSKEEARLDWTKSATQLWQEVRAFNPWPVSYFE-- 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ + PG +I ++ G + ++ +Q G + L + D
Sbjct: 240 HQGNTIKVWQTQVSTTSSTAAPGTIINASKKGIDVSTGDGVLTLLSMQLPGKKPLSVADI 299
Query: 298 LL 299
L
Sbjct: 300 LN 301
>gi|320451482|ref|YP_004203578.1| methionyl-tRNA formyltransferase [Thermus scotoductus SA-01]
gi|320151651|gb|ADW23029.1| methionyl-tRNA formyltransferase [Thermus scotoductus SA-01]
Length = 304
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 103/312 (33%), Positives = 157/312 (50%), Gaps = 14/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV F GT +AV L AL + H +V V TQP +P G RGLK S V + A LP
Sbjct: 1 MRVAFFGTPAWAVPVLDAL-NRHHQVVLVVTQPDKPKG-RGLKPAPSPVAEYALAHGLPL 58
Query: 63 LVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P +L F + +VAV AYG ++P+ +L LGF N H SLLP++RG A
Sbjct: 59 LKPERLKGNREFLEAFKAVAPEVAVTAAYGKILPKEVLEVPPLGFLNLHPSLLPKYRGPA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ A++ G+ ETG+AIMK ++ LDTGP+ + + I + L + L ++
Sbjct: 119 PVPWALIRGERETGVAIMKTEEGLDTGPLYALWRTEIGPEEDAVALSERLRDKGIELLLW 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D L PQ A + K E R+ F SA+ ++N R + P+PG++
Sbjct: 179 VLDNLPHLTPT--PQEGEPSY-APLLIKEEGRIRFADSAQAIYNRHRGVQPWPGSYFF-- 233
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R+K+L + G G+PG V+ + +GA+R++ +Q G R + D+
Sbjct: 234 --HGGRRVKVLRMRPEPGAGEPGVVLGVDREGVLVGTGEGAIRLLEVQPEGKRPMPAADW 291
Query: 298 LLGCPVIIGCIV 309
G V G +
Sbjct: 292 ARGYGVGPGTRL 303
>gi|187935454|ref|YP_001885414.1| methionyl-tRNA formyltransferase [Clostridium botulinum B str.
Eklund 17B]
gi|238691599|sp|B2THS2|FMT_CLOBB RecName: Full=Methionyl-tRNA formyltransferase
gi|187723607|gb|ACD24828.1| methionyl-tRNA formyltransferase [Clostridium botulinum B str.
Eklund 17B]
Length = 309
Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats.
Identities = 92/315 (29%), Positives = 161/315 (51%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV + + L+ H + +V TQP +P G RG K S V ++A + +P
Sbjct: 1 MKIVFMGTPDFAVPSFKKLIE-EHEVKAVLTQPDKPKG-RGKKLAYSPVKEEALKHDIPV 58
Query: 63 LVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
PTK +E E+ N D +VVA+G ++ + +L+ K G N HASLLP +RGAA
Sbjct: 59 YQPTKLKDDKEIIEKLKEINPDFIIVVAFGQILTKEVLDIPKYGCINLHASLLPMYRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ I+ G+ ++G M MD LDTG + +V I ++ + L L + +++
Sbjct: 119 PLNWVIIKGEKKSGNTTMLMDVGLDTGDMLLKEEVEIHEDMTSGELHDILMISGGELLLK 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L ++ Q + +N+ A ++HN +R L+P+P A+ E
Sbjct: 179 TIEGLYNGSIKPIKQEGETFYAKMLDKELAH-INWNDDAYDIHNLVRGLNPWPIAYTEYK 237
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
ER+KL ++++++ KPG +I + C + + I ++Q G+ L I
Sbjct: 238 G----ERMKLYKTKVLDKEVSNKPGTIIEVNKDGVKVVCGKNVLIIEKVQFPNGKPLTIE 293
Query: 296 DFLLGCPVIIGCIVG 310
++ G + I+G
Sbjct: 294 QYINGHSIDKDIILG 308
>gi|229086419|ref|ZP_04218595.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock3-44]
gi|228696935|gb|EEL49744.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock3-44]
Length = 314
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 103/313 (32%), Positives = 162/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +F+V L+ L+ + ++ V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVG-RKKVMTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I +IM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYSIMQGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLVQGKLEPIKQNEAEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E V + + G ++ F +A V+I LQ +G + + F
Sbjct: 240 -GQVVKVWWGEKVPVTMQAEAGSIVVIEEDGFVVATGNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|125718646|ref|YP_001035779.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK36]
gi|166215520|sp|A3CPX4|FMT_STRSV RecName: Full=Methionyl-tRNA formyltransferase
gi|125498563|gb|ABN45229.1| Methionyl-tRNA formyltransferase, putative [Streptococcus sanguinis
SK36]
Length = 311
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 87/314 (27%), Positives = 158/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +F+ L+ L+ S + +++V TQP R G R + ++ V + A E+ LP
Sbjct: 2 MKIIFMGTPDFSATVLKGLLDSGQYEVLAVVTQPDRAVG-RKREIRMTPVKELALEYKLP 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL + + L +V A L + N HASLLP++RG AP
Sbjct: 61 VYQPEKLAKSSDLEELMNLEADGIVTAAFGQFLPSCLLDSVDFAVNVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ GD + G+ IM+M K +D G + + PI N L ++L+++ +++
Sbjct: 121 IHYALINGDEQAGVTIMEMVKEMDAGDMIASKATPIEETDNVGTLFEKLALIGRDLLLDV 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + PQ + +T++ IS E R+++ ++ + N IR + P+P A +
Sbjct: 181 LPAYRAGQIIPQPQDPSQVTFSPNISPEEERIDWSKTNRQIFNQIRGMYPWPVAHTLLQG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R K+ E+ ++ G G+PG+++ +A +GA+ + +Q AG + I DFL
Sbjct: 241 ----QRFKIYEADMMAGSGQPGQILSISKKELVVAAGKGALSLKTVQPAGKPKMAIVDFL 296
Query: 299 L--GCPVIIGCIVG 310
G + +G G
Sbjct: 297 NGLGRSLSLGDTFG 310
>gi|119773184|ref|YP_925924.1| methionyl-tRNA formyltransferase [Shewanella amazonensis SB2B]
gi|166215508|sp|A1S1J8|FMT_SHEAM RecName: Full=Methionyl-tRNA formyltransferase
gi|119765684|gb|ABL98254.1| methionyl-tRNA formyltransferase [Shewanella amazonensis SB2B]
Length = 320
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 114/314 (36%), Positives = 176/314 (56%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+++F GT +FA LQAL++S H +++VYTQP RPAG RG K S V A E +P
Sbjct: 3 PLKIIFAGTPDFAARHLQALLTSEHEVIAVYTQPDRPAG-RGQKLTPSPVKSLALEHQIP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E ++ + AD+ VVVAYGL++P+ +L+ +LG N H S+LPRWRGAA
Sbjct: 62 VYQPKSLRKEEAQQELAALGADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ IM+MD LDTG + +PI + +A L ++L+ A+++
Sbjct: 122 PIQRALWAGDTETGVTIMQMDVGLDTGDMLLKTHLPIEDDDTSASLYEKLAGQGPAALLD 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L + L Q E YAEK+SK E R++F + A+N+ +RA +P+P ++ E
Sbjct: 182 ALAALSEGTLSAEKQDEALANYAEKLSKEEARLDFAKPAKNLWQEVRAFNPWPVSYFEHQ 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ ++ G ++ IA + G +RI ++Q G + +D+ D
Sbjct: 242 GQTIKVWQTSVLAEPSTKAS--GTIVAAGKQGIDIATADGMLRIHKMQLPGKKPMDVADI 299
Query: 298 LL--GCPVIIGCIV 309
L G G ++
Sbjct: 300 LNSRGDWFTPGTLL 313
>gi|146291134|ref|YP_001181558.1| methionyl-tRNA formyltransferase [Shewanella putrefaciens CN-32]
gi|166215512|sp|A4Y1C6|FMT_SHEPC RecName: Full=Methionyl-tRNA formyltransferase
gi|145562824|gb|ABP73759.1| methionyl-tRNA formyltransferase [Shewanella putrefaciens CN-32]
Length = 318
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 116/306 (37%), Positives = 179/306 (58%), Gaps = 12/306 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQAL++S H+++ VYTQP RPAG RG K S V + A +
Sbjct: 1 MKSLNIIFAGTPDFAARHLQALLNSQHNVIGVYTQPDRPAG-RGKKLTASPVKELAIANN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P L +E +Q L+ D+ VVVAYGL++P+ +L+ +LG N H S+LPRWRG
Sbjct: 60 IPVFQPGSLRKEPAQQELAALNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQRA+ AGD ETG+ IM+MD LDTG + +PI N +A L ++L+ A+
Sbjct: 120 AAPIQRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDNDTSASLYEKLAEQGPIAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++A++ L L Q E YAEK+SK E R+++ +SA+ + +RA +P+P ++ E
Sbjct: 180 LQALEGLTNGTLAAEKQDEALANYAEKLSKEEARLDWNKSAKQLWQEVRAFNPWPVSYFE 239
Query: 239 MMIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
++ IK+ ++ + E PG +I +A + G + ++ +Q G L+
Sbjct: 240 ----HQGNTIKVWQAHVSETISTAAPGTIISASKKGIEVATADGVLTLLSMQLPGKNPLN 295
Query: 294 IGDFLL 299
+ D L
Sbjct: 296 VADILN 301
>gi|315178588|gb|ADT85502.1| methionyl-tRNA formyltransferase [Vibrio furnissii NCTC 11218]
Length = 315
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 115/316 (36%), Positives = 178/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKHLALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDEAKQALASLNADIMVVVAYGLLLPKAVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + K+PI ++ ++ + +L+ L A+V+
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDVGLDTGDMLKIAKLPIDASDTSSSMYDKLAELGPQALVD 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q Q + YA+K+SK E ++++ SA+ + +RA +P+P + +
Sbjct: 183 CLSDIAQGTAVAVKQDDALANYAQKLSKEEAKIDWTLSAQEIERCVRAFNPWPMSHFSVA 242
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
IK+ +S++ G PG +I +A +G + + LQ G + L +
Sbjct: 243 ENQ----IKVWQSRVETGNSTHTPGTIIQADKTGIYVATGEGILVLESLQIPGKKALPVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G +
Sbjct: 299 DILNARASWFEVGTQL 314
>gi|297544785|ref|YP_003677087.1| methionyl-tRNA formyltransferase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842560|gb|ADH61076.1| methionyl-tRNA formyltransferase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 310
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 111/313 (35%), Positives = 175/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L++VFMGT +FAV +LQ L +++ SV TQP + G RG+K S V + A + +
Sbjct: 2 LKIVFMGTPDFAVPSLQKLFEEGYNVASVVTQPDKQKG-RGMKLRFSPVKEVALQKGVEI 60
Query: 63 LVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K+ + + N DV VV AYG ++P+ IL K G N HASLLP++RGAA
Sbjct: 61 LQPEKIKNNKEFLERLKEINPDVIVVAAYGKILPEEILALPKYGCINVHASLLPKYRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ ETGI M MDK LDTG + + +PI + L +LS L A ++E
Sbjct: 121 PINWAIINGEKETGITTMLMDKGLDTGDILIKKSIPILEEDDAETLHDKLSRLGAEVLIE 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +LE+ L Q E +YA ++K VN+ ++AE + N IR + P+PG +
Sbjct: 181 TLKRLEKGTLTPVKQNEEEASYAPILTKEMGHVNWNKTAEEIRNLIRGMKPWPGCYTFYK 240
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ + ++VE GK G V+ + + C + A++I+ +Q+ G + + I +
Sbjct: 241 D----KMLKIWKGEIVEYNGKEENGTVLKSKGDLIVKCDKDALKIVEIQQEGSKKMSIRE 296
Query: 297 FLLGCPVIIGCIV 309
+L+G + G I+
Sbjct: 297 YLIGHNIPEGTIL 309
>gi|326389545|ref|ZP_08211112.1| methionyl-tRNA formyltransferase [Thermoanaerobacter ethanolicus JW
200]
gi|325994550|gb|EGD52975.1| methionyl-tRNA formyltransferase [Thermoanaerobacter ethanolicus JW
200]
Length = 310
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 106/313 (33%), Positives = 170/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L++VFMGT +FAV +LQ L + + +V TQP + G RG+K S V + A + +
Sbjct: 2 LKIVFMGTPDFAVPSLQKLFEEGYDVAAVVTQPDKQKG-RGMKLSFSPVKEVALQKGVEI 60
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K+ N DV VV AYG ++P+ +L K G N HASLLP++RGAA
Sbjct: 61 LQPEKIKNNPEFLNRLKEINPDVIVVAAYGKILPEEVLTLPKYGCINVHASLLPKYRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ ETGI M MDK LDTG + + +PI + L +LS L A ++E
Sbjct: 121 PINWAIINGEKETGITTMLMDKGLDTGDMLIKKSIPILDKDDAETLHDKLSRLGAEVLIE 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ LEQ L Q E +Y+ ++K +++ ++AE + N IR + P+PG +
Sbjct: 181 TLKALEQGTLIPVKQREEEASYSPILTKEMGHIDWNKTAEEIRNLIRGMKPWPGCYTFYG 240
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ + ++VE G + G V+ + + C + A++I+ +Q+ G + + I +
Sbjct: 241 D----KMLKIWKGEIVEYNGNEENGTVLKSKGDLIVKCGKDALKIVEIQQEGSKKMGIRE 296
Query: 297 FLLGCPVIIGCIV 309
+L+G + G I
Sbjct: 297 YLIGHNIPEGTIF 309
>gi|322377783|ref|ZP_08052272.1| methionyl-tRNA formyltransferase [Streptococcus sp. M334]
gi|321281206|gb|EFX58217.1| methionyl-tRNA formyltransferase [Streptococcus sp. M334]
Length = 311
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 91/316 (28%), Positives = 155/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + +V A L + N HASLLP+ RG
Sbjct: 59 LPIYQPEKLSGSPEMEAIMQLGADGIVTAAFGQFLPSKLLDSMNFAVNVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI N L ++ +++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPIMDEDNVGTLFEKSALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ + +T++ I E ++++ +S + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGEIQPEPQDPSQVTFSPNIKPEEEKLDWNKSNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSISKKELLVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|167621967|ref|YP_001672261.1| methionyl-tRNA formyltransferase [Shewanella halifaxensis HAW-EB4]
gi|189044559|sp|B0TLC9|FMT_SHEHH RecName: Full=Methionyl-tRNA formyltransferase
gi|167351989|gb|ABZ74602.1| methionyl-tRNA formyltransferase [Shewanella halifaxensis HAW-EB4]
Length = 321
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 182/316 (57%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L V+F GT +FA LQAL+ S H++++VYTQP RPAG RG K S V A E +
Sbjct: 3 PLNVIFAGTPDFAARHLQALIDSEHNVIAVYTQPDRPAG-RGKKLQASPVKALALENGIA 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ + + NAD+ VVVAYGL++P+ +L+ +LG N H S+LPRWRGAA
Sbjct: 62 VFQPKSLRDEDAQAELTALNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD+ETG+ IM+MD LDTG + ++ I + +A L ++L+ A++E
Sbjct: 122 PIQRALWAGDSETGVTIMQMDIGLDTGDMLLKTQLKIEDSDTSATLYEKLAEQGPSALIE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ + Q++LP Q E+ YAEK+SK E R+++ +SA + IRA +P+P + E
Sbjct: 182 ALAGIAQDSLPAEKQDESLANYAEKLSKEEARLDWSKSATALWREIRAFNPWPVSHYE-- 239
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++ IK+ +S + + PG ++ +IA +G + I ++Q G + L +
Sbjct: 240 --HEGNTIKVWQSHVSDETSSKLPGTILSADKNGISIATGEGVLIITQMQLPGKKPLSVA 297
Query: 296 DFLLGCP--VIIGCIV 309
D L G ++
Sbjct: 298 DILNSRADWFTPGTVL 313
>gi|228960082|ref|ZP_04121746.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228799598|gb|EEM46551.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 314
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 105/313 (33%), Positives = 161/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT F+V L+ L+ + +V V TQP RP G R + V +A++ +P
Sbjct: 2 IKVVFMGTPGFSVPVLRRLIEDGYEVVGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 60
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 61 LQPLKIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G +TGI IM M + LD G + +V I T L +LS AH + +
Sbjct: 121 IHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 181 VPLLIQGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E + + G ++ F +A S V+I LQ +G + + F
Sbjct: 240 -GQVVKVWWGEKVPITEPAEAGTIVAIEEDGFVVATSNETGVKITELQPSGKKRMSCSQF 298
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 299 LRGTKPEIGTKLG 311
>gi|262166813|ref|ZP_06034550.1| methionyl-tRNA formyltransferase [Vibrio mimicus VM223]
gi|262026529|gb|EEY45197.1| methionyl-tRNA formyltransferase [Vibrio mimicus VM223]
Length = 315
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 119/314 (37%), Positives = 177/314 (56%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAG-RGKKLTASPVKTLALEHNIP 62
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P EE +Q ++ NAD+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSEESKQQLVALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ IM+MD LDTG + + +PI ++ +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDSETGVTIMQMDVGLDTGDMLKITTLPIEASDTSASMYDKLAELGPQALLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ + Q Q + YA K+SK E R+N+ A ++ IRA +P+P + E+
Sbjct: 183 CLEDIAQGTAVAIKQDDAQANYAHKLSKEEARINWNDEAAHIERCIRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E++ V PG +I +A Q + + LQ G + L + D
Sbjct: 243 ENSIKVWQARVETRAVND--TPGTIIQADKSGIYVATGQDVLVLESLQIPGKKALPVQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNARADWFSVGSQL 314
>gi|259909967|ref|YP_002650323.1| methionyl-tRNA formyltransferase [Erwinia pyrifoliae Ep1/96]
gi|224965589|emb|CAX57121.1| methionyl-tRNA formyltransferase [Erwinia pyrifoliae Ep1/96]
gi|283480067|emb|CAY75983.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)N-formyltransferase
[Erwinia pyrifoliae DSM 12163]
Length = 315
Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 114/316 (36%), Positives = 178/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+L ++F GT +FA L AL+SS H +V V+TQP RPAG RG K S V + A++ ++
Sbjct: 4 SLNIIFAGTPDFAARHLDALLSSGHRVVGVFTQPDRPAG-RGNKVTASPVKQLAEQHNIA 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L EE +Q ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPASLRSEENQQLVAALNADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + PI + +A L +L+ L ++
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDIGLDTGDMLHKLACPIDAADTSATLYDKLADLGPAGLLT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +L + Q E+ ++YAEK+SK E R+++ SAE + IRA +P+P ++ +
Sbjct: 183 TLAQLAGGSARPQVQDESLVSYAEKLSKEEARLDWSLSAEQLGRCIRAFNPWPVSYFVI- 241
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++ ++ +PGE++ + + G + I LQ AG + +
Sbjct: 242 ---DEQPVKVWKASVLPAVNGHQPGEILQADKQGIQVVTADGVLNIEELQPAGKKAMKAQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L G I+
Sbjct: 299 DLLNSRREWFTPGNII 314
>gi|254455875|ref|ZP_05069304.1| methionyl-tRNA formyltransferase [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082877|gb|EDZ60303.1| methionyl-tRNA formyltransferase [Candidatus Pelagibacter sp.
HTCC7211]
Length = 307
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 123/311 (39%), Positives = 186/311 (59%), Gaps = 8/311 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M ++VFMGT FAV L++L + + I +VYTQPP+ + +RG + S + A+ +L
Sbjct: 1 MPKKIVFMGTPMFAVPILKSLYQNGYPISNVYTQPPQKS-QRGQRINKSPIQGIAETLNL 59
Query: 61 PALVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
P K EEYE F AD+ VVVAYG +IP+ L+ +K GF N HAS+LPRWRG
Sbjct: 60 DFKTPKSLKDNNEEYESFKKIEADLVVVVAYGQIIPKEFLSLSKKGFINIHASILPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQR+IM D ETG++IMK+ + LDTGPV K+ + +N+N + ++LS+L A +
Sbjct: 120 AAPIQRSIMNLDKETGVSIMKIAEKLDTGPVCNTYKIDLDNNLNAQDIGEKLSLLAAEKI 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ +D + + Q + +TYA KI K E +++ SA+N+ I L P PGA+
Sbjct: 180 LDNIDDILDDKATFIEQDHSKVTYASKIQKSEGEIDWTESAKNIIGKINGLYPTPGAFFI 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDF 297
ER K+L++++ G G PGEVI+ I C + +++I +QR G + +IG+F
Sbjct: 240 Y----NGERYKILKAEIGNGIGNPGEVISDYLEIVCGKNQSIKITEIQRQGKKPQNIGEF 295
Query: 298 LLGCPVIIGCI 308
+LG + G
Sbjct: 296 ILGSQIKKGSK 306
>gi|83814411|ref|YP_446276.1| methionyl-tRNA formyltransferase [Salinibacter ruber DSM 13855]
gi|294508207|ref|YP_003572265.1| methionyl-tRNA formyltransferase [Salinibacter ruber M8]
gi|83755805|gb|ABC43918.1| methionyl-tRNA formyltransferase [Salinibacter ruber DSM 13855]
gi|294344535|emb|CBH25313.1| methionyl-tRNA formyltransferase [Salinibacter ruber M8]
Length = 307
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 105/311 (33%), Positives = 167/311 (53%), Gaps = 8/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP- 61
+RVVFMGT EFAV +L ALV + + V+V T P RP G RG + + V + AQ +
Sbjct: 1 MRVVFMGTPEFAVPSLTALVDAGYPPVAVATGPDRPRG-RGQEVTPTPVKETAQAAGIDR 59
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + + ++ + V ++P + A G +N H +LLP++RGAAP
Sbjct: 60 ILQPEDVTDPSFAAAVAELEPDVIAVVAYKILPPEVFAAASEGAFNLHGALLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A+MAG++ TG+ ++ +DTG + +++ I N + ++ L A A+VE
Sbjct: 120 INHAVMAGESTTGVTTFFLEPSVDTGDIILQKEMSIGPNETAGEVHDRMAELGAEAVVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +++ + PQ + T A KI + + + SAE VHNH+R LSP+PGAW
Sbjct: 180 VRQIDAGTVETRPQDDEKATPAPKIHDEDGEIPWDASAEAVHNHVRGLSPYPGAWT---- 235
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPN--FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ R+K+ ++ EG G PG V++ + +AC GAV ++ LQ+ G + LD DFL
Sbjct: 236 LHDDTRLKIYRTRRAEGTGAPGTVLDADGRLLVACGTGAVEVVVLQQPGRQRLDAADFLN 295
Query: 300 GCPVIIGCIVG 310
G + G +G
Sbjct: 296 GYALSEGDRLG 306
>gi|307706105|ref|ZP_07642924.1| methionyl-tRNA formyltransferase [Streptococcus mitis SK321]
gi|307618505|gb|EFN97653.1| methionyl-tRNA formyltransferase [Streptococcus mitis SK321]
Length = 311
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 158/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + +V A L + N HASLLP+ RG
Sbjct: 59 LPIYQPEKLSGSPEMEAIMQLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRCSIPITDEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ + +T++ I E ++++ +S + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGDIKPEPQDPSQVTFSPNIKPEEEKLDWNKSNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ LVEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALLVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|257868126|ref|ZP_05647779.1| methionyl-tRNA formyltransferase [Enterococcus casseliflavus EC30]
gi|257874599|ref|ZP_05654252.1| methionyl-tRNA formyltransferase [Enterococcus casseliflavus EC10]
gi|257802240|gb|EEV31112.1| methionyl-tRNA formyltransferase [Enterococcus casseliflavus EC30]
gi|257808763|gb|EEV37585.1| methionyl-tRNA formyltransferase [Enterococcus casseliflavus EC10]
Length = 317
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 163/319 (51%), Gaps = 15/319 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L+ L+ + + + +V TQP RP G R + V + A + L
Sbjct: 1 MT-KIVFMGTPAFSVPILEGLLEAGYEVAAVVTQPDRPVG-RKKTITPTPVKEAAMKHGL 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E EQ + D+ + A+G +P +L K G N HASLLP++RG
Sbjct: 59 LVLQPEKISGSPEMEQIQALAPDLLITAAFGQFLPSALLEVPKHGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ AIM G+ ETG+ IM+M K +D G + ++PI++ + + +LS+L ++
Sbjct: 119 APVHYAIMKGEQETGVTIMEMIKKMDAGGIFAQARLPITAQDDVGTMFDKLSLLGKDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + K+ L PQ E +T++ IS+ + +++ ++A + +R + P+P A+
Sbjct: 179 ETVPKILSGELQPVPQEEAKVTFSPNISREQEAIDWQKTAVQIDAQVRGMRPWPIAFTT- 237
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
R KL + +E +PG +I IAC +G + I LQ AG D
Sbjct: 238 ---QNGNRWKLWQVTPLEQTTTAQPGTIIERTKKTLLIACGEGTVLAIDELQPAGKGRQD 294
Query: 294 IGDFLLGC--PVIIGCIVG 310
I FL G + G VG
Sbjct: 295 IAAFLNGSGQQIQKGDQVG 313
>gi|160933493|ref|ZP_02080881.1| hypothetical protein CLOLEP_02339 [Clostridium leptum DSM 753]
gi|156867370|gb|EDO60742.1| hypothetical protein CLOLEP_02339 [Clostridium leptum DSM 753]
Length = 306
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 163/305 (53%), Gaps = 8/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV L L+ + H + V+TQP +P G R + V + A E LP
Sbjct: 1 MRIVFMGTPDFAVPCLAGLLEAGHQVCGVFTQPDKPKG-RKMVLTPPPVKELALEKGLPV 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ E ++ VVVAYG ++P+ IL G N H SLLP++RGAAP
Sbjct: 60 YQPAKMRDGEALGILQELRPELIVVVAYGKILPKEILTLPPKGCVNVHGSLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ +++ G+ ETG+ M MD+ LDTG + V I N L L+ + A +++
Sbjct: 120 IQWSVINGEKETGVTTMLMDEGLDTGDMLLRETVKIGENETAGELFDRLAPIGAQLLLKT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ LEQ ++ Q + TYA + K + VN+ +S+ VHN IR L+P+P A+ +
Sbjct: 180 LEGLEQGSIAPQKQNDQESTYASMLDKNLSAVNWNKSSREVHNLIRGLTPWPTAYTVLEG 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN-PNFTIACSQGA-VRIMRLQRAGGRVLDIGDFLL 299
+++KL S + +G GE+++ F + C G VRI ++Q G + + +F
Sbjct: 240 ----KKLKLFGSSVSAAKGGAGEIVSLNPFLVGCGDGVCVRIDQVQLEGKKRMGAAEFFR 295
Query: 300 GCPVI 304
G PV
Sbjct: 296 GHPVP 300
>gi|157692253|ref|YP_001486715.1| methionyl-tRNA formyltransferase [Bacillus pumilus SAFR-032]
gi|166988362|sp|A8FD38|FMT_BACP2 RecName: Full=Methionyl-tRNA formyltransferase
gi|157681011|gb|ABV62155.1| methionyl-tRNA formyltransferase [Bacillus pumilus SAFR-032]
Length = 317
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 100/317 (31%), Positives = 165/317 (52%), Gaps = 13/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R+VFMGT +F+V LQ L++ + +V V TQP RP G R V +A + +
Sbjct: 1 MA-RIVFMGTPDFSVPVLQTLITEGYEVVGVVTQPDRPKG-RKRVLTPPPVKVEALKHGI 58
Query: 61 PALVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P K+ +E + + D+ V A+G ++P+R+L+ + G N HASLLP RG
Sbjct: 59 PVLQPEKVRLDEEIDKVLALKPDLIVTAAFGQILPKRLLDEPQFGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G +TG+ IM M + LD G + +V I N L +LSV A +
Sbjct: 119 APIHYAILQGKKKTGVTIMYMVERLDAGDMISKVEVEIDELDNVGTLHDKLSVAGAALLK 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + ++ PQ E+ TYA I + + R+++ ++ E ++N +R L+P+P A+ E
Sbjct: 179 DTVPNVLSGSISPIPQNEDAATYAPNIKREQERLDWTKTGEELYNQVRGLNPWPVAYTEW 238
Query: 240 MIGNKHERIKLLESQ--LVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLD 293
+ +K+ E++ +E + + G+VI I + + +Q AG + +
Sbjct: 239 NGAH----LKVWEAKKVPLEVQEEAGKVIELQKEGPVIGTGNKQGLLLTGVQPAGKKKMS 294
Query: 294 IGDFLLGCPVIIGCIVG 310
DFL G + IG +G
Sbjct: 295 GEDFLRGANIEIGQKLG 311
>gi|315612652|ref|ZP_07887564.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis ATCC
49296]
gi|315315239|gb|EFU63279.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis ATCC
49296]
Length = 311
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 91/316 (28%), Positives = 158/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E +
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLSDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAN 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + +V A L + N HASLLP+ RG
Sbjct: 59 LPIYQPEKLSGSPEMEAIMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLAIVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPGYIAGEIKPVPQDPSQVTFSPNIKPEEEKLDWTKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGAPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|257877735|ref|ZP_05657388.1| methionyl-tRNA formyltransferase [Enterococcus casseliflavus EC20]
gi|257811901|gb|EEV40721.1| methionyl-tRNA formyltransferase [Enterococcus casseliflavus EC20]
Length = 317
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 163/319 (51%), Gaps = 15/319 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L+ L+ + + + +V TQP RP G R + V + A + L
Sbjct: 1 MT-KIVFMGTPAFSVPILEGLLEAGYEVAAVVTQPDRPVG-RKKTITPTPVKEAAMKHGL 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E EQ + D+ + A+G +P +L K G N HASLLP++RG
Sbjct: 59 LVLQPEKISGSPEMEQIQALAPDLLITAAFGQFLPSALLEVPKHGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ AIM G+ ETG+ IM+M K +D G + ++PI++ + + +LS+L ++
Sbjct: 119 APVHYAIMEGEQETGVTIMEMIKKMDAGGIFAQARLPITAQDDVGTMFDKLSLLGKDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + K+ L PQ E +T++ IS+ + +++ ++A + +R + P+P A+
Sbjct: 179 ETVPKILSGELQPVPQEEAKVTFSPNISREQEAIDWQKTAVQIDAQVRGMRPWPIAFTT- 237
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
R KL + +E +PG +I IAC +G + I LQ AG D
Sbjct: 238 ---QNGNRWKLWQVTPLEQTTTAQPGTIIERTKKTLLIACGEGTVLAIDELQPAGKGRQD 294
Query: 294 IGDFLLGC--PVIIGCIVG 310
I FL G + G VG
Sbjct: 295 IAAFLNGSGQQIQKGDQVG 313
>gi|91762407|ref|ZP_01264372.1| Methionyl-tRNA formyltransferase [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718209|gb|EAS84859.1| Methionyl-tRNA formyltransferase [Candidatus Pelagibacter ubique
HTCC1002]
Length = 310
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 118/312 (37%), Positives = 186/312 (59%), Gaps = 8/312 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT FAV L++L ++ I +VYTQPP+ + +RG K S + A+++++
Sbjct: 1 MTKKIVFMGTPFFAVPILKSLYEKNYIIPAVYTQPPKKS-QRGQKINKSPIQIVAEDYNI 59
Query: 61 PALVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
P K +EEYE + D+ +VVAYG +IP+ LN K GF N HASLLP+WRG
Sbjct: 60 DCRTPDTLKANKEEYEYLKQLDLDLVIVVAYGQIIPKEYLNLAKKGFINIHASLLPKWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQR+IM + ETGI+IMK+ + LDTGPV ++ I + N + +LS+L + +
Sbjct: 120 AAPIQRSIMNLEKETGISIMKIGEKLDTGPVGNSYRIKIKDSDNAETISTKLSILASEKI 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+E ++ + ++ L Q E TYA KI K E + + +AE++ I L P PGA+
Sbjct: 180 IENVENIFEDKLTFKEQDETSATYASKIEKSEGEIKWNDNAESIIGKINGLYPSPGAFFI 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDF 297
ER K+L+++L G+ GEV++ + I+C +++I+ +QR G + +I +F
Sbjct: 240 FKD----ERYKILKAELGNKSGEIGEVMSNDLEISCGNQRSIKIIEIQRQGKKPQNINEF 295
Query: 298 LLGCPVIIGCIV 309
+LG + G +
Sbjct: 296 VLGSQITKGSRI 307
>gi|332366360|gb|EGJ44111.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK355]
Length = 311
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 157/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +F+ L+ L+ + + +++V TQP R G R + ++ V + A E+ LP
Sbjct: 2 MKIIFMGTQDFSATVLKGLLDNGQYQVLAVVTQPDRAVG-RKREIRMTPVKELALEYKLP 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL Q + L +V A L + N HASLLP++RG AP
Sbjct: 61 VYQPEKLAQSSDLEELMNLEADGIVTAAFGQFLPSCLLDSVDFAVNVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ GD + G+ IM+M K +D G + + PI N L ++L+++ +++
Sbjct: 121 IHYALINGDEQAGVTIMEMVKEMDAGDMIASKATPIEETDNVGTLFEKLALIGRDLLLDV 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + PQ + +T++ IS E R+++ ++ + N IR + P+P A +
Sbjct: 181 LPAYRAGQITPQPQDPSQVTFSPNISPEEERIDWSKTNRQIFNQIRGMYPWPVAHTLLQG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R K+ E+ + G G+PG+++ +A QGA+ + +Q AG + I DFL
Sbjct: 241 ----QRFKIYEADMAAGSGQPGQILSISKKELVVAAGQGALSLKTVQPAGKPKMAIVDFL 296
Query: 299 L--GCPVIIGCIVG 310
G + IG G
Sbjct: 297 NGLGRSLSIGDTFG 310
>gi|325688780|gb|EGD30789.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK115]
Length = 313
Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats.
Identities = 89/317 (28%), Positives = 158/317 (49%), Gaps = 12/317 (3%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M + +++FMGT +F+ L+ L+ S + +++V TQP R G R + ++ V + A E+
Sbjct: 1 MKMMKIIFMGTPDFSATVLKGLLDSGQYEVLAVVTQPDRAVG-RKREICMTPVKELALEY 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
L P KL Q + L +V A L + N HASLLP++RG
Sbjct: 60 GLQVYQPEKLAQSSDLEELMNLEADGIVTAAFGQFLPSRLLDSVDFAVNVHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API A++ GD + G+ IM+M K +D G + + PI N L ++L+++ +
Sbjct: 120 GAPIHYALINGDEQAGVTIMEMVKEMDAGDMIASKATPIEETDNVGTLFEKLALIGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + + PQ + +T++ IS E R+++ ++ + N IR + P+P A
Sbjct: 180 LDVLPAYRAGQIIPQPQDPSQVTFSPNISPEEERIDWSKTNRQIFNQIRGMYPWPVAHTL 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +R K+ E+ + G+G+PG+++ +A QGA+ + +Q AG + I
Sbjct: 240 LQG----QRFKIYEADMASGDGQPGQILSISKKELVVAAGQGALSLKTVQPAGKPKMAIV 295
Query: 296 DFLL--GCPVIIGCIVG 310
DFL G + +G G
Sbjct: 296 DFLNGLGRSLSLGDTFG 312
>gi|218529892|ref|YP_002420708.1| methionyl-tRNA formyltransferase [Methylobacterium chloromethanicum
CM4]
gi|218522195|gb|ACK82780.1| methionyl-tRNA formyltransferase [Methylobacterium chloromethanicum
CM4]
Length = 309
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 144/310 (46%), Positives = 195/310 (62%), Gaps = 3/310 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV TL L + H+I +VYT+ P AG RG+ LS VH +A+ LP
Sbjct: 1 MRIVFMGTPDFAVPTLDRLHADGHTIAAVYTRAPARAG-RGMALKLSPVHARAEALGLPV 59
Query: 63 LVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L PT L EE + + ++VAVVVAYG+++PQRIL+ + G N H SLLPRWRGAAP
Sbjct: 60 LTPTTLKSEEAAETFAGHGSEVAVVVAYGMLLPQRILDLPRFGCLNLHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+MAGD E+G+ +M+M+ LDTGPVA +VPIS +N L L L A M A
Sbjct: 120 IQRAVMAGDAESGVGVMRMEAGLDTGPVAMEARVPISEGMNAGELHDALMPLGADLMGRA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE++ L +PQ E G+ YA KI+ E R+++ R A V HI LSPFPGA++E +
Sbjct: 180 IRALERDGLTFTPQAEAGVVYAHKITNDEARIDWSRPAAEVARHINGLSPFPGAYVEADL 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGG-RVLDIGDFLLG 300
G ER+K+L + EG G PG +++ T+AC GAVR++ L+RAG FL G
Sbjct: 240 GKGLERVKVLRAVTAEGSGAPGTLLDAAGTVACGTGAVRLLELRRAGKGGTASGEAFLRG 299
Query: 301 CPVIIGCIVG 310
+ G +G
Sbjct: 300 ARLAAGARLG 309
>gi|296877029|ref|ZP_06901071.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis ATCC
15912]
gi|296431973|gb|EFH17778.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis ATCC
15912]
Length = 322
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 98/316 (31%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 2 TL-RVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
+ +++FMGT +F+ L+ L+ S + I++V TQP R G R + ++ V + A E
Sbjct: 11 KMTKLIFMGTPDFSATVLKGLLADSRYEILAVVTQPDRKVG-RKKEIRMTPVKQVALEHQ 69
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP L P KL + L +V A L N HASLLP++RG
Sbjct: 70 LPVLQPEKLSGSPEMETLLSLDADGIVTAAFGQFLPTKLLENFQFAVNVHASLLPKYRGG 129
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI N L ++L+VL ++
Sbjct: 130 APIHYALINGDEEAGVTIMEMVKEMDAGDMIAARSLPILDEDNVGTLFEKLAVLGRDLLL 189
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + SPQ N +T++ I E +++ ++ V N IR ++P+P A +
Sbjct: 190 DTLPAYLAGEIKSSPQDPNLVTFSPNILPEEEVLDWTKTNRQVFNQIRGMNPWPVAHTLL 249
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E++L EG G PGEVI +A +G++ + +Q AG + I D
Sbjct: 250 ----NGQRFKVYEAELCEGNGNPGEVIGLSKKELLVAAGEGSLSLKVVQPAGKPKMSITD 305
Query: 297 FLLGC--PVIIGCIVG 310
FL G + +G G
Sbjct: 306 FLNGAGRQLKLGDRFG 321
>gi|324994073|gb|EGC25987.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK678]
gi|327459279|gb|EGF05625.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK1]
gi|327472705|gb|EGF18132.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK408]
gi|327490497|gb|EGF22278.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK1058]
Length = 311
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 157/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +F+ L+ L+ S + +++V TQP R G R + ++ V + A E+ L
Sbjct: 2 MKIIFMGTPDFSATVLKGLLDSGQYEVLAVVTQPDRAVG-RKREIRMTPVKELALEYGLQ 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL Q + L +V A L + N HASLLP++RG AP
Sbjct: 61 VYQPEKLAQSSDLEELMNLEADGIVTAAFGQFLPSRLLDSVDFAVNVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ GD + G+ IM+M K +D G + + PI N L ++L+++ +++
Sbjct: 121 IHYALINGDEQAGVTIMEMVKEMDAGDMIASKATPIEETDNVGTLFEKLAIIGRDLLLDV 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + PQ + +T++ IS E R+++ ++ + N IR + P+P A +
Sbjct: 181 LPAYRAGQIIPQPQDPSQVTFSPNISPEEERIDWSKTNRQIFNQIRGMYPWPVAHTLLQG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R K+ E+ +V G G+PG+++ +A QGA+ + +Q AG + I DFL
Sbjct: 241 ----QRFKIYEADMVAGSGQPGQILSISKKELVVAAGQGALSLKTVQPAGKPKMAIVDFL 296
Query: 299 L--GCPVIIGCIVG 310
G + +G G
Sbjct: 297 NGLGRSLSLGDTFG 310
>gi|15895000|ref|NP_348349.1| methionyl-tRNA formyltransferase [Clostridium acetobutylicum ATCC
824]
gi|18266727|sp|O05101|FMT_CLOAB RecName: Full=Methionyl-tRNA formyltransferase
gi|15024689|gb|AAK79689.1|AE007681_10 Methionyl-tRNA formyltransferase [Clostridium acetobutylicum ATCC
824]
gi|325509137|gb|ADZ20773.1| methionyl-tRNA formyltransferase [Clostridium acetobutylicum EA
2018]
Length = 310
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 98/314 (31%), Positives = 169/314 (53%), Gaps = 13/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L++VFMGT EF+V +L+ L+ + + + +V TQP +P G RG K +S V + A + ++P
Sbjct: 2 LKIVFMGTPEFSVPSLEKLIEN-YDVRAVLTQPDKPKG-RGKKLAMSEVKEVAVKNNIPV 59
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + D VVVA+G ++ + +L+ K N HASLLP +RGAA
Sbjct: 60 FQPVKLKNDIEVINKLKEIAPDFIVVVAFGQILSKEVLDIPKYACINLHASLLPNYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ +TG M M + LDTG + +V I ++ L L A +V+
Sbjct: 120 PINWAIINGETKTGNTTMIMAEGLDTGDMLLKDEVDIKRDMTAGELHDILMNRGADLLVK 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D+ + N+ Q E YA +SK ++N+ +E ++N IR L+P+P A+
Sbjct: 180 TIDEFSKGNIKPEKQGEPETDYAAMLSKDTGKINWNDKSERIYNLIRGLNPWPLAYSSY- 238
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ E+++++ EG+PG + N + S G + I ++Q G + +++G
Sbjct: 239 ---NDKVMKIHEAKILDAAPEGEPGLITNVDNNGIEVNSSDGKILITKIQFPGKKSMNVG 295
Query: 296 DFLLGCPVIIGCIV 309
+++ G + G I+
Sbjct: 296 EYIRGNNIDKGVIL 309
>gi|260771087|ref|ZP_05880015.1| methionyl-tRNA formyltransferase [Vibrio furnissii CIP 102972]
gi|260613976|gb|EEX39167.1| methionyl-tRNA formyltransferase [Vibrio furnissii CIP 102972]
Length = 315
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 114/316 (36%), Positives = 177/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKHLALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDEAKQALASLNADIMVVVAYGLLLPKAVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI ++ ++ + +L+ L A+V+
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDVGLDTGDMLKIATLPIDASDTSSSMYDKLAELGPQALVD 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q Q + YA+K+SK E ++++ SA+ + +RA +P+P + +
Sbjct: 183 CLSDIAQGTAVAVKQDDALANYAQKLSKEEAKIDWTLSAQAIERCVRAFNPWPMSHFSVA 242
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
IK+ +S++ G PG +I +A +G + + LQ G + L +
Sbjct: 243 ENQ----IKVWQSRVETGNSTHAPGTIIQADKTGIYVATGEGILVLESLQIPGKKALPVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G +
Sbjct: 299 DILNARASWFQVGTQL 314
>gi|224369792|ref|YP_002603956.1| Fmt [Desulfobacterium autotrophicum HRM2]
gi|223692509|gb|ACN15792.1| Fmt [Desulfobacterium autotrophicum HRM2]
Length = 314
Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats.
Identities = 113/317 (35%), Positives = 166/317 (52%), Gaps = 13/317 (4%)
Query: 1 MTL--RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M ++VFMGT +F+V L AL + H I+ V TQP RP G RG K V V AQE
Sbjct: 1 MKKPFKIVFMGTPDFSVPPLLALAKAGHEILLVITQPDRPKG-RGKKMVPPPVKVAAQEL 59
Query: 59 SLPALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
L + P K+G ++ L+ D+ VVVA+G + Q IL+ + N HASLLP R
Sbjct: 60 GLRVIQPEKMGTPGIKETLLALKPDLFVVVAFGHKLSQDILDIPAINPINIHASLLPAHR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
G++PIQ A++ D ETG+ M MDK+LDTG + PI + L LS + A
Sbjct: 120 GSSPIQAALLNQDQETGVTTMFMDKNLDTGDMLLRSVTPIQVSDTAQDLHDRLSAMGADL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+V+ +D L + L PQ T+A + K + R+++ S E + H+RA++P+PGA+
Sbjct: 180 IVKTLDALADDQLTPIPQDHALATHAPMLKKSDGRIDWTLSPEKISAHVRAMTPWPGAFT 239
Query: 238 EMMIGNKHERIKLLES--QLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+ +R+K+ +PG V+ + +A G V I+ LQ A G+ L
Sbjct: 240 HL----NGQRLKIFRVTCHTTPTRAEPGTVLDCDDQGILVAAGNGTVSIVELQGASGKRL 295
Query: 293 DIGDFLLGCPVIIGCIV 309
DFL G PV G ++
Sbjct: 296 TAADFLRGKPVKPGVVL 312
>gi|331266905|ref|YP_004326535.1| methionyl-tRNA formyltransferase [Streptococcus oralis Uo5]
gi|326683577|emb|CBZ01195.1| methionyl-tRNA formyltransferase [Streptococcus oralis Uo5]
Length = 311
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 90/316 (28%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLSDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + ++ A L + N HASLLP+ RG
Sbjct: 59 LPIYQPEKLSGSPEMEDIMKLGADGIITAAFGQFLPSKLLDSMDFAVNVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLAIVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPGYITGEIKPEPQDSSQVTFSPNIKPEEEKLDWTKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGSPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|218710999|ref|YP_002418620.1| methionyl-tRNA formyltransferase [Vibrio splendidus LGP32]
gi|254789380|sp|B7VMX2|FMT_VIBSL RecName: Full=Methionyl-tRNA formyltransferase
gi|218324018|emb|CAV20380.1| Methionyl-tRNA formyltransferase [Vibrio splendidus LGP32]
Length = 321
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 114/318 (35%), Positives = 178/318 (55%), Gaps = 11/318 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKNIALENNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++PQ +L+ +LG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDEAKQELANLNADIMVVVAYGLLLPQAVLDTPRLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI S +A + ++L+ L A+VE
Sbjct: 123 PIQRSIWAGDKETGVTIMQMDIGLDTGDMLSIATLPIESTDTSASMYEKLAGLGPDALVE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K+SK E ++++ SAE++ +RA +P+P + ++
Sbjct: 183 CLADIASGKAVAEKQDDELANYAKKLSKEEAKIDWNDSAEHIERCVRAFNPWPMSHFAIV 242
Query: 241 I--GNKHERIKLLESQLVE--GEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGRVLD 293
N + IK+ ++++ E G +I +A + + +LQ G + +
Sbjct: 243 DSSSNDEKSIKVWQTRVDEESTSAPAGSIIKADKTGIYVATGDKVLVLEQLQVPGKKAMS 302
Query: 294 IGDFLLGCP--VIIGCIV 309
+ D L +G +
Sbjct: 303 VQDILNSRASWFEVGTQL 320
>gi|71083163|ref|YP_265882.1| methionyl-tRNA formyltransferase [Candidatus Pelagibacter ubique
HTCC1062]
gi|123734384|sp|Q4FNG0|FMT_PELUB RecName: Full=Methionyl-tRNA formyltransferase
gi|71062276|gb|AAZ21279.1| Methionyl-tRNA formyltransferase [Candidatus Pelagibacter ubique
HTCC1062]
Length = 310
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 118/312 (37%), Positives = 188/312 (60%), Gaps = 8/312 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT FAV L++L ++ I +VYTQPP+ + +RG K S + A+++++
Sbjct: 1 MTKKIVFMGTPFFAVPILKSLYEKNYIIPAVYTQPPKKS-QRGQKINKSPIQIVAEDYNI 59
Query: 61 PALVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
P K +EEYE + D+ +VVAYG +IP+ LN K GF N HASLLP+WRG
Sbjct: 60 DCRTPDTLKTNKEEYEYLKQLDLDLVIVVAYGQIIPKEYLNLAKKGFINIHASLLPKWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQR+IM + ETGI+IMK+ + LDTGPV + ++ I + N + +LS+L + +
Sbjct: 120 AAPIQRSIMNLEKETGISIMKIGEKLDTGPVGNIYRIKIKDSDNAETISTKLSILASEKI 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+E ++ + ++ L Q + TYA KI K E + + +AE++ I L P PGA+
Sbjct: 180 IENVENIFEDKLTFKEQDDTSATYASKIEKSEGEIKWNDNAESIIGKINGLYPSPGAFFI 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQ-GAVRIMRLQRAGGRVLDIGDF 297
ER K+L+++L G+ GEV++ + I+C +++I+ +QR G + +I +F
Sbjct: 240 FKD----ERYKILKAELGNKSGEIGEVMSNDLEISCGNQKSIKIIEIQRQGKKPQNINEF 295
Query: 298 LLGCPVIIGCIV 309
+LG +I G +
Sbjct: 296 VLGSQIIKGSRI 307
>gi|322391002|ref|ZP_08064507.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis ATCC
903]
gi|321142306|gb|EFX37779.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis ATCC
903]
Length = 311
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 100/316 (31%), Positives = 158/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ S + I++V TQP R G R + ++ V + A E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLADSRYEILAVVTQPDRKVG-RKKEIRMTPVKQVALEHR 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP L P KL + L +V A L N HASLLP++RG
Sbjct: 59 LPVLQPEKLSGSPEMETLLSLDADGIVTAAFGQFLPTKLLENFQFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI N L ++L+VL ++
Sbjct: 119 APIHYALINGDEEAGVTIMEMVKEMDAGDMIAARSLPILDEDNVGTLFEKLAVLGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + SPQ + +T++ I E +++ ++ V N IR ++P+P A +
Sbjct: 179 DTLPAYLAGEIKPSPQDPSLVTFSPNILPEEEVLDWTKTNRQVFNQIRGMNPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E++L EG G PGEVI +A +GA+ + +Q AG + I D
Sbjct: 239 ----NGQRFKVYEAELCEGNGNPGEVIALTKKELLVAAGEGALSLKVVQPAGKPKMSITD 294
Query: 297 FLLGC--PVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGAGRQLKVGDHFG 310
>gi|253575777|ref|ZP_04853112.1| methionyl-tRNA formyltransferase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844820|gb|EES72833.1| methionyl-tRNA formyltransferase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 328
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 96/320 (30%), Positives = 160/320 (50%), Gaps = 13/320 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ +VFMGT FAV +L+ L+ +++V V TQP RP G R + V + A LP
Sbjct: 9 PMNIVFMGTPAFAVPSLEGLLREGYNVVGVVTQPDRPQG-RKKVLTPTPVKEAALRHGLP 67
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P ++ E ++ D+ V AYG ++P+ +L+ K G N H SLLP++RG A
Sbjct: 68 VLQPARMRAPEAVAEVAALQPDLIVTAAYGQILPKGVLDLPKYGCLNVHGSLLPKYRGGA 127
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAIM G+ ETGI +M M + LDTG + VPI + L ++LS A ++E
Sbjct: 128 PIQRAIMGGEKETGITLMYMAEGLDTGDMIAKTVVPIDDEDTSGTLFEKLSEAGARLLLE 187
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + PQ + TYA +++ + R+++ ++ +++ +R L PF G +
Sbjct: 188 QLPLILEGKAERIPQNDAEATYAPNLTREDERIDWSATSRQIYDRVRGLVPFAGGFTTWN 247
Query: 241 IGNKHERIKLLESQLVEGEG--------KPGEVI---NPNFTIACSQGAVRIMRLQRAGG 289
++ G PG V+ + + GAV + R+Q AG
Sbjct: 248 GEVFKVWAVAKPAEAGTSAGGAASTSEPAPGTVLELSSQGIKVKTGDGAVWLTRVQPAGK 307
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ ++ DF+ G + +G ++
Sbjct: 308 KAMEASDFIRGGVMQVGTVL 327
>gi|325686918|gb|EGD28942.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK72]
gi|328945031|gb|EGG39187.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK1087]
Length = 311
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 88/314 (28%), Positives = 158/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +F+ L+ L+ S + +++V TQP R G R + ++ V + A E+ LP
Sbjct: 2 MKIIFMGTPDFSATVLKGLLDSGQYEVLAVVTQPDRAVG-RKREIRMTPVKELALEYKLP 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL Q + L +V A L + N HASLLP++RG AP
Sbjct: 61 VYQPEKLAQSSDLEELMNLEADGIVTAAFGQFLPSRLLDSVDFAVNVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ GD + G+ IM+M K +D G + + PI N L ++L+++ +++
Sbjct: 121 IHYALINGDEQAGVTIMEMVKEMDAGDMIASKATPIEETDNVGTLFEKLALIGRDLLLDV 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + PQ + +T++ IS E R+++ ++ + N IR + P+P A +
Sbjct: 181 LPAYRAGQIIPQPQDPSQVTFSPNISPEEERIDWSKTNRQIFNQIRGMYPWPVAHTLLQG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R K+ E+ ++ G G+PG+++ +A +GA+ + +Q AG + I DFL
Sbjct: 241 ----QRFKIYEADMMAGSGQPGQILSISKKELVVAAGKGALSLKTVQPAGKPKMAIVDFL 296
Query: 299 L--GCPVIIGCIVG 310
G + +G G
Sbjct: 297 NGLGRSLSLGDTFG 310
>gi|332876990|ref|ZP_08444743.1| methionyl-tRNA formyltransferase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332685098|gb|EGJ57942.1| methionyl-tRNA formyltransferase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 312
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 87/306 (28%), Positives = 147/306 (48%), Gaps = 6/306 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FA+A+L++LV +++++V V T +PAG RG K S V + A+ +P
Sbjct: 1 MRIVFMGTPDFALASLKSLVENNYNVVGVVTVADKPAG-RGQKLHASPVKQYAESKGIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E++ L +V ++P+ + K G +N HASLLP +RGAAPI
Sbjct: 60 LQPVKLKDEDFLNQLRALKPDLQIVVAFRMLPEVVWRLPKYGTFNLHASLLPNYRGAAPI 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ +TG+ +D+ +DTG + PI ++ L +L A +++ +
Sbjct: 120 NWAIINGEKQTGVTTFFIDEKIDTGAIIQQAVTPIEAHETAGSLHDKLMEQGAALVLQTV 179
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETR-VNFCRSAENVHNHIRALSPFPGAWLEMMI 241
D + + Q + ET VN+ + IR +SP+P AW +
Sbjct: 180 DSIVAGTYSIQAQNKEVTYAEAPKIYKETCLVNWQAEGIAIERLIRGMSPYPTAWGNLQQ 239
Query: 242 GNKHERIKLLES--QLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ IK+ ++ + G+VI +A G + ++ LQ + + D
Sbjct: 240 QGETIAIKIYDALYKPAVHNEAIGKVIVEKKQLLVAVKDGFIELLELQLPAKKRMKTTDL 299
Query: 298 LLGCPV 303
L G
Sbjct: 300 LNGFSF 305
>gi|188588955|ref|YP_001920561.1| methionyl-tRNA formyltransferase [Clostridium botulinum E3 str.
Alaska E43]
gi|251778015|ref|ZP_04820935.1| methionyl-tRNA formyltransferase [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|238689670|sp|B2V4B2|FMT_CLOBA RecName: Full=Methionyl-tRNA formyltransferase
gi|188499236|gb|ACD52372.1| methionyl-tRNA formyltransferase [Clostridium botulinum E3 str.
Alaska E43]
gi|243082330|gb|EES48220.1| methionyl-tRNA formyltransferase [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 309
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 95/315 (30%), Positives = 163/315 (51%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV + + L+ H + +V TQP +P G RG K S V ++A ++ +P
Sbjct: 1 MKIVFMGTPDFAVPSFRKLIE-EHEVKAVLTQPDKPKG-RGKKLAYSPVKEEALKYDIPV 58
Query: 63 LVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
PTK +E E+ N D +VVA+G ++ + +L+ K G N HASLLP +RGAA
Sbjct: 59 YQPTKLKDDKEIIEKLKEINPDFIIVVAFGQILTKEVLDIPKYGCINLHASLLPMYRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ I+ G+ ++G M MD LDTG + +V I ++ T L L + +++
Sbjct: 119 PLNWVIIKGEKKSGNTTMLMDVGLDTGDMLLKEEVEIHEDMTTGELHDILMISGGELLLK 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L ++ Q + +N+ A ++HN +R L+P+P A+ E
Sbjct: 179 TIEGLCSGSIKPVKQEGETFYAKMLDKELAH-INWTEDAYDIHNLVRGLNPWPIAYTEYK 237
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
ER+KL +++++ E KPG +I +AC + + I ++Q G+ L I
Sbjct: 238 G----ERMKLYKTKVLYKEVSNKPGTIIEVNKEGVKVACGKNVLIIEKVQFPNGKPLTIE 293
Query: 296 DFLLGCPVIIGCIVG 310
++ G + I+G
Sbjct: 294 QYINGHSIEKDIILG 308
>gi|169333676|ref|ZP_02860869.1| hypothetical protein ANASTE_00060 [Anaerofustis stercorihominis DSM
17244]
gi|169259670|gb|EDS73636.1| hypothetical protein ANASTE_00060 [Anaerofustis stercorihominis DSM
17244]
Length = 312
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 99/313 (31%), Positives = 171/313 (54%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VV+MGT +FAV L++++ S H + V +QP + RRG K V S V + A + +
Sbjct: 1 MKVVYMGTPDFAVGPLKSIIESGHEVKLVVSQPDKKNSRRGNKIVYSPVKQCALDNEIEV 60
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ +E +++ DV VV AYG ++ ILN K G N HASLLP RGAAP
Sbjct: 61 FQPNRVSDDESYEYIKSLKPDVIVVCAYGQIVKSNILNLVKFGCINIHASLLPHLRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I R+I+ GD TG+ M+M++ LDTG + ++ I ++ L ++ ++ + +VE
Sbjct: 121 IHRSIINGDKVTGVTTMQMNEGLDTGDMLLKEEIEIGDDMTVGELHDKMEIIGSKLIVET 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++KLE+ + Q +N TYA KI+K + ++F + ++++N IR L+PFP +++ +
Sbjct: 181 LNKLEKGEINPKKQDDNLSTYANKITKEDCHIDFSENVKDIYNKIRGLNPFPLSYVNLDE 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI-----NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
N +++++L K G ++ + +A G + I L+ G + +D
Sbjct: 241 KNIKIYESIIKNELSNE--KCGTILSYNKKDKALLVAAKDGIIGIKELKMQGKKKMDAAS 298
Query: 297 FLLGCPVIIGCIV 309
F G IIG +
Sbjct: 299 FYNGNRDIIGKVF 311
>gi|149910329|ref|ZP_01898972.1| methionyl-tRNA formyltransferase [Moritella sp. PE36]
gi|149806577|gb|EDM66545.1| methionyl-tRNA formyltransferase [Moritella sp. PE36]
Length = 317
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 113/316 (35%), Positives = 176/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT +FA L AL++S H +++VY+QP RPAG RG K S V + A +P
Sbjct: 4 PLRIIFAGTPDFAAKHLSALINSEHEVIAVYSQPDRPAG-RGKKLKPSDVKQLAVSHDIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E + + NAD+ VVVAYGL++PQ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPISLRNEEAQQALSALNADLMVVVAYGLILPQIVLDTPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG + PI+ + +A L +L+ L ++E
Sbjct: 123 PIQRAIWAGDAETGVTIMQMDLGLDTGAMLHKVTCPIADDETSASLYDKLAALGPQGLLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + N Q + YA K+SK E +++ +SA + +RA +P+P ++ ++
Sbjct: 183 TLAHISNNTAVAEVQDDELSNYASKLSKEEANIDWTQSAVEIERQVRAFNPWPVSYTQIA 242
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
N +K+ ++ + E E +PG VI +A G + ++ +Q AG + + +
Sbjct: 243 EQN----VKIWQTSVSEATTEAQPGTVIAATKHGIQVATGNGVLTLLNMQLAGKKAMPVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G ++
Sbjct: 299 DILNARKEWFTVGQLL 314
>gi|325290450|ref|YP_004266631.1| methionyl-tRNA formyltransferase [Syntrophobotulus glycolicus DSM
8271]
gi|324965851|gb|ADY56630.1| methionyl-tRNA formyltransferase [Syntrophobotulus glycolicus DSM
8271]
Length = 328
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 101/329 (30%), Positives = 159/329 (48%), Gaps = 23/329 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV TL+ L + + I V+TQP +PAG RG K V + A + L
Sbjct: 1 MRIVFMGTPDFAVPTLEILHRTGYEITGVFTQPDKPAG-RGNKLKAGPVKEAAMKLGLSV 59
Query: 63 LVPTKLGQEEYEQ-FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ E D VVVA+G ++ IL+ G N HASLLP++RGAAP
Sbjct: 60 FQPVRIKAPEAVALLRELRPDCIVVVAFGQILSAEILHIPPFGCINVHASLLPQYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RA++ GD TGI M MD+ LDTG + ++PI N + + +L+ A +++
Sbjct: 120 IHRAVLNGDKMTGITTMFMDEGLDTGDILLQAEIPIEQNDSVGVVHDQLAQTGAQLLLDT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM-- 239
+ K+++ L +PQ ++ + E +++ A +HN IR L+P+PGA
Sbjct: 180 LKKIKEKTLRRTPQSQDFTYAPMLTKEDE-YLDWKGEATQIHNQIRGLNPWPGACTSFRG 238
Query: 240 --MIGNKHERIKLLESQLVEGEGK-------------PGEVI---NPNFTIACSQGAVRI 281
+ E + +L E K PG ++ F + +G + I
Sbjct: 239 EKVKIWSSEIVGEWRPELAEQTAKEEALKENRAEATIPGTILAMTAKGFICSTGRGYIEI 298
Query: 282 MRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ +Q AG + DF+ G + G G
Sbjct: 299 LEIQPAGKTRMKARDFINGRRISPGEFFG 327
>gi|302671347|ref|YP_003831307.1| methionyl-tRNA formyltransferase Fmt [Butyrivibrio proteoclasticus
B316]
gi|302395820|gb|ADL34725.1| methionyl-tRNA formyltransferase Fmt [Butyrivibrio proteoclasticus
B316]
Length = 331
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 108/331 (32%), Positives = 174/331 (52%), Gaps = 24/331 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FA A L+ ++ + H +V V TQP +P GR G + +S V + A LP
Sbjct: 1 MKIVFMGTPDFARAALEKIIEAGHEVVLVVTQPDKPKGRSG-ELQVSDVKECALLHGLPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ E ++AD+ VV A+G ++ Q IL+ +LG N HASLLP +RGAAP
Sbjct: 60 FQPVRIKLPENVAELRKYDADIYVVAAFGQILSQEILDIPRLGCVNIHASLLPEYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ+AI+ G ETG+ IM+M +DTG + R +PI+ + GL +LS L A +VE
Sbjct: 120 IQQAILDGRKETGVTIMQMAAGMDTGDILTQRTIPIAEDETGGGLFDKLSALGAELIVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ KLE+ + PQ E+ T K+SK R+ + A+ + N +R L+P+P A+ +
Sbjct: 180 LPKLERGEITPVPQDEDRATKCGKLSKDMGRIQWSDDADKLRNLVRGLNPWPSAYTSLNK 239
Query: 242 GNK-HERIKLL---------------------ESQLVEGEGKPGEVINPNFTIACSQGAV 279
+ R K L ++ + G V+ +F + G +
Sbjct: 240 KSFKIWRAKALMELEFRQMAKELGDDKDGVRAKALDDKAYGTVMAVLRDSFVVLTGDGYL 299
Query: 280 RIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+I +Q G + + + DFL+G + +G +G
Sbjct: 300 QIFEVQLEGKKRMPVKDFLMGYKLEVGAKLG 330
>gi|293364892|ref|ZP_06611609.1| methionyl-tRNA formyltransferase [Streptococcus oralis ATCC 35037]
gi|307703145|ref|ZP_07640091.1| methionyl-tRNA formyltransferase [Streptococcus oralis ATCC 35037]
gi|291316342|gb|EFE56778.1| methionyl-tRNA formyltransferase [Streptococcus oralis ATCC 35037]
gi|307623220|gb|EFO02211.1| methionyl-tRNA formyltransferase [Streptococcus oralis ATCC 35037]
Length = 311
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + +V A L + N HASLLP+ RG
Sbjct: 59 LPIYQPEKLSGSPEMEAIMKLGADGIVTAAFGQFLPSKLLDSMDFAINVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLAIVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPGYIAGEIKPVPQDPSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + IG G
Sbjct: 295 FLNGVGRTLTIGERFG 310
>gi|270293273|ref|ZP_06199484.1| methionyl-tRNA formyltransferase [Streptococcus sp. M143]
gi|270279252|gb|EFA25098.1| methionyl-tRNA formyltransferase [Streptococcus sp. M143]
Length = 311
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 91/316 (28%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT EF+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPEFSATVLKGLLSDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + ++ A L + N HASLLP+ RG
Sbjct: 59 LPIYQPEKLSGSPEMEAIMKLGADGIITAAFGQFLPSKLLDSMDFAVNVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLAIVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPGYIAGEIKPEPQDPSQVTFSPNIKPEEEKLDWTKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|126738018|ref|ZP_01753739.1| methionyl-tRNA formyltransferase [Roseobacter sp. SK209-2-6]
gi|126720515|gb|EBA17220.1| methionyl-tRNA formyltransferase [Roseobacter sp. SK209-2-6]
Length = 302
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 154/309 (49%), Positives = 191/309 (61%), Gaps = 9/309 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT EF+V L ALV + H I +VY QPPRPAG RG K S VH +A L
Sbjct: 1 MRIVFMGTPEFSVPILDALVQAGHEIAAVYCQPPRPAG-RGKKERPSPVHARAAALGLKV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G+EE +F + ADVAVVVAYGL++PQ +L+A K G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKGEEEQAEFAALEADVAVVVAYGLILPQAVLDAPKQGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD ETGI IM+M+ LDTGPV I TAGL LS + A +V A
Sbjct: 120 IHRAIMAGDAETGICIMQMEAGLDTGPVLLREGTEIEDAETTAGLHDRLSEMGASLIVTA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE + Q E G+TYA KI K E ++++ AE V IRALSPFPGAW+E+
Sbjct: 180 LRHLEGLCPEV--QPEEGVTYAAKIDKSEAQIDWSAPAEEVDRKIRALSPFPGAWVEV-- 235
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN-PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+R+KLL S+L G+GKPG V++ +AC GAV ++RLQRAG D F G
Sbjct: 236 --DGQRVKLLASRLTTGQGKPGTVLDAERLIVACGSGAVELLRLQRAGKGAQDREVFQRG 293
Query: 301 CPVIIGCIV 309
P+ G +
Sbjct: 294 FPLAQGRQL 302
>gi|84393440|ref|ZP_00992197.1| methionyl-tRNA formyltransferase [Vibrio splendidus 12B01]
gi|84375956|gb|EAP92846.1| methionyl-tRNA formyltransferase [Vibrio splendidus 12B01]
Length = 321
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 113/318 (35%), Positives = 178/318 (55%), Gaps = 11/318 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKNIALENNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++PQ +L+ +LG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDEAKQELADLNADIMVVVAYGLLLPQAVLDTPRLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI + +A + ++L+ L A+VE
Sbjct: 123 PIQRSIWAGDKETGVTIMQMDIGLDTGDMLSIATLPIEATDTSASMYEKLAGLGPDALVE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K+SK E ++++ SAE++ +RA +P+P + ++
Sbjct: 183 CLADIASGKAVAEKQDDELANYAKKLSKEEAKIDWNDSAEHIERCVRAFNPWPMSHFAIV 242
Query: 241 I--GNKHERIKLLESQLVE--GEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGRVLD 293
N + IK+ ++++ E G +I +A + + +LQ G + +
Sbjct: 243 DSSSNDEKSIKVWQTRVDEESTSAPAGSIIKADKTGIYVATGDKVLVLEQLQVPGKKAMS 302
Query: 294 IGDFLLGCP--VIIGCIV 309
+ D L +G +
Sbjct: 303 VQDILNSRASWFEVGTQL 320
>gi|149190436|ref|ZP_01868707.1| methionyl-tRNA formyltransferase [Vibrio shilonii AK1]
gi|148835690|gb|EDL52656.1| methionyl-tRNA formyltransferase [Vibrio shilonii AK1]
Length = 315
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 174/304 (57%), Gaps = 11/304 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E +P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKNIALEHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L D+ VVVAYGL++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPVNFKSDEAKQELKDLNADIMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD +TG+ IM+MD LDTG + + +PI + +A + +L+ L A+VE
Sbjct: 123 PIQRSIWAGDAQTGVTIMQMDIGLDTGDMLKIATLPIEATDTSATMYDKLAELGPQALVE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + N Q ++ YA K+SK E ++++ + AE + +RA +P+P ++ +
Sbjct: 183 CLADIASGNAAPEKQNDDEANYASKLSKDEAKIDWNQPAEFIERCVRAFNPWPMSFFSVE 242
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVINP---NFTIACSQGAVRIMRLQRAGGRVLDIG 295
N IK+ +S++ + + G ++ +A QG + + ++Q G + + +
Sbjct: 243 ENN----IKVWQSRVEDNATESVAGTILKADKTGIYVATGQGTLVLEQIQIPGKKAMPVS 298
Query: 296 DFLL 299
D L
Sbjct: 299 DVLN 302
>gi|21910908|ref|NP_665176.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes MGAS315]
gi|28895402|ref|NP_801752.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes SSI-1]
gi|25452943|sp|Q8K6E8|FMT_STRP3 RecName: Full=Methionyl-tRNA formyltransferase
gi|21905114|gb|AAM79979.1| putative methionyl tRNA formyltransferase [Streptococcus pyogenes
MGAS315]
gi|28810648|dbj|BAC63585.1| putative methionyl tRNA formyltransferase [Streptococcus pyogenes
SSI-1]
Length = 311
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 160/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +F+ L+ L+ + + I+ V TQP R G R ++ V + A E +
Sbjct: 2 IKLLFMGTPQFSATVLKGLLDNPAYEILGVVTQPDRAVG-RKKDIKVTPVKQLALEHGIS 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL + + ++ A IL + N HASLLP++RG AP
Sbjct: 61 IYQPEKLSGSQELIEIMGLGADGIITAAFGQFLPTILLDSVSFAINVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM GD E G+ IM+M K +D G + PI N L ++L+++ ++++
Sbjct: 121 IHYAIMNGDKEAGVTIMEMIKEMDAGDMVAKASTPILETDNVGTLFEKLAIIGRDLLLDS 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L PQ + T++ IS + ++++ + V NHIR ++P+P A +
Sbjct: 181 LPAYLSGELKPIPQDHSQATFSPNISPEQEKLDWTMFNQEVFNHIRGMNPWPVAHTFLEG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R+K+ E+QL EGEG PG+VI + IA QGA+ ++ +Q AG + I DFL
Sbjct: 241 ----QRLKIYEAQLAEGEGLPGQVIVKTKKSLVIATGQGALSLIVVQPAGKPKMSIIDFL 296
Query: 299 L--GCPVIIGCIVG 310
G + +G I+G
Sbjct: 297 NGIGRKLEVGDIIG 310
>gi|302389591|ref|YP_003825412.1| methionyl-tRNA formyltransferase [Thermosediminibacter oceani DSM
16646]
gi|302200219|gb|ADL07789.1| methionyl-tRNA formyltransferase [Thermosediminibacter oceani DSM
16646]
Length = 313
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 103/312 (33%), Positives = 170/312 (54%), Gaps = 8/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT EFA+ +L ALV H++ +V TQP RP G R V AQ+ +
Sbjct: 1 MKIVFMGTPEFALPSLNALVERGHNVTAVVTQPDRPKG-RKRIPTPPPVKLMAQKHGIRV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ + + L N D+ VVVAYG ++P +L+ +G N HASLLP++RGAAP
Sbjct: 60 YQPEKVKDKTFVNQLKALNPDLIVVVAYGQILPASVLSIPAIGCINVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ AI+ G+++TG+ M MD+ +DTG + +++ I+ + L + L+ L +VE
Sbjct: 120 IQWAIIKGESKTGVTTMWMDEGMDTGDIFLQKEIEINPEWTSVELSEVLARLGGELLVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+DK++ NL PQ TYA + K + R+++ E+++N IR + P+PGA+ +
Sbjct: 180 LDKIKSKNLIRIPQNHAEATYAPMLRKEDGRIDWRSKTEDIYNLIRGVQPWPGAYT--VR 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+I + ++ +G PG+++ + G + I LQ AG R + +F
Sbjct: 238 SGVEVKIWGAKIHSIDRKGDPGKILGIDKTRGILVGTGDGILMITELQEAGRRRMKATEF 297
Query: 298 LLGCPVIIGCIV 309
L+G + G +
Sbjct: 298 LVGHVLNEGELF 309
>gi|209559768|ref|YP_002286240.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes NZ131]
gi|238066640|sp|B5XMI3|FMT_STRPZ RecName: Full=Methionyl-tRNA formyltransferase
gi|209540969|gb|ACI61545.1| Methionyl-tRNA formyltransferase [Streptococcus pyogenes NZ131]
Length = 311
Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats.
Identities = 98/314 (31%), Positives = 160/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +F+ L+ L+ + + I+ V TQP R G R ++ V + A E +
Sbjct: 2 IKLLFMGTPQFSATVLKGLLDNPAYEILGVVTQPDRAVG-RKKDIKVTPVKQLALEHGIS 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL + + ++ A IL + N HASLLP++RG AP
Sbjct: 61 IYQPEKLSGSQELIEIMGLGADGIITAAFGQFLPTILLDSVSFAINVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM GD E G+ IM+M K +D G + PI N L ++L+++ ++++
Sbjct: 121 IHYAIMNGDKEAGVTIMEMIKEMDAGDMVAKASTPILETDNVGTLFEKLAIIGRDLLLDS 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L PQ + T++ IS ++++ S + V NHIR ++P+P A +
Sbjct: 181 LPAYLSGELKPIPQDHSQATFSPNISPEHEKLDWTMSNQEVFNHIRGMNPWPVAHTFLEG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R+K+ E+QL EGEG PG+VI + IA QGA+ ++ +Q AG + I DFL
Sbjct: 241 ----QRLKIYEAQLAEGEGLPGQVIVKTKKSLVIATGQGALSLIVVQPAGKPKMSIIDFL 296
Query: 299 L--GCPVIIGCIVG 310
G + +G I+G
Sbjct: 297 NGIGRKLEVGDIIG 310
>gi|290968495|ref|ZP_06560034.1| methionyl-tRNA formyltransferase [Megasphaera genomosp. type_1 str.
28L]
gi|290781491|gb|EFD94080.1| methionyl-tRNA formyltransferase [Megasphaera genomosp. type_1 str.
28L]
Length = 312
Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 105/312 (33%), Positives = 165/312 (52%), Gaps = 11/312 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R+VFMGT +F+V +L+AL + H I +V+TQP + G RG K V K A+ + +P
Sbjct: 5 RIVFMGTPDFSVPSLKALKEAGHEIAAVFTQPDKERG-RGKKVTAGPVKKTAEMYDIPVF 63
Query: 64 VPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
PT E Q DV +V+AYG ++P I++ G N HASLLP++RGAAPI
Sbjct: 64 QPTNLRTAEVEAQLRQLAPDVIIVIAYGKILPPSIVHLPMYGCLNVHASLLPKYRGAAPI 123
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI GD ++G+ IM++D+ LDTG + ++ + + T L +L+ L A + +
Sbjct: 124 QYAIKEGDTKSGVTIMRLDEGLDTGKILKQAELSLDAEETTGSLFTKLATLGARTLTTVL 183
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
L Q E TY KI+K +++ + A + IR L P PGA+ +
Sbjct: 184 ADLPAYEAGAVAQEEAHATYTAKITKDMAALDWRQEAIVLERWIRTLDPSPGAYTQYAG- 242
Query: 243 NKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+R+K+ +Q+V PG VI +FT+ GA+R++ +Q + + G F
Sbjct: 243 ---KRLKIWSAQVVPHTSSCSPGTVIAVDKAHFTVQTGNGALRVLEVQPESRKRMKTGQF 299
Query: 298 LLGCPVIIGCIV 309
L G P+ +G ++
Sbjct: 300 LQGTPLRVGEVL 311
>gi|260775014|ref|ZP_05883914.1| methionyl-tRNA formyltransferase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609104|gb|EEX35263.1| methionyl-tRNA formyltransferase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 315
Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 111/314 (35%), Positives = 170/314 (54%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E +P
Sbjct: 4 PLKIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKNIALEHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ +Q L+ D+ VVVAYGL++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDDAKQELADLNADLMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI + +A + ++L+ L A+VE
Sbjct: 123 PIQRSIWAGDQETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYEKLAGLGPQALVE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K+SK E R+N+ AE++ +RA +P+P + E
Sbjct: 183 CLADIADGKASPEKQDDELANYAKKLSKEEARINWNDDAEHIERCVRAFNPWPMSHFE-- 240
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ ++ + PG ++ IA + + + +LQ G + + + D
Sbjct: 241 AADNSIKVWQSRVDVQTTTEAPGTILQADKTGIYIATGKHVLVLEQLQVPGKKAMPVQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNSRASWFEVGTQL 314
>gi|291541041|emb|CBL14152.1| methionyl-tRNA formyltransferase [Roseburia intestinalis XB6B4]
Length = 306
Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 88/308 (28%), Positives = 157/308 (50%), Gaps = 11/308 (3%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +F+V TL+ ++ + H +V V +QP + G R + V + A + P +
Sbjct: 1 MGTPDFSVGTLEEIIKAGHEVVLVVSQPDKAVG-RSKALKYTPVKECAIAHGIEVYQPER 59
Query: 68 LGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
+ ++L D+ +VVA+G +IP+ +L+ K G N HASLLP++RGAAPIQ A+
Sbjct: 60 VRDSACIEYLKSFHADIMIVVAFGQIIPKAVLDMPKYGCVNVHASLLPKYRGAAPIQWAV 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ GD TG++ +MD+ +DTG + KV I + L L+ + A V+ ++ +E
Sbjct: 120 INGDPYTGVSTQRMDEGVDTGDIILEEKVEIRPDETGGSLFDRLAEVGAELCVKTIEAIE 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+PQ + T+ KI K +++ +SA+ + IR L+P+P A+ + +
Sbjct: 180 NGTAVYTPQDNSKATHTAKIHKELGSIDWTKSAKEIECLIRGLNPWPSAYTRL----DGK 235
Query: 247 RIKLLESQLV--EGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+K+ + ++ E + PG +I +F + G + ++ +Q G + + FL G
Sbjct: 236 TLKIWRANVLPDEKKAAPGCIIKAEKGSFLVQTGDGVLELLEVQLEGKKRMTTDAFLNGY 295
Query: 302 PVIIGCIV 309
V G
Sbjct: 296 TVEEGTYF 303
>gi|319947547|ref|ZP_08021777.1| methionyl-tRNA formyltransferase [Streptococcus australis ATCC
700641]
gi|319746235|gb|EFV98498.1| methionyl-tRNA formyltransferase [Streptococcus australis ATCC
700641]
Length = 311
Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 158/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R AG R + ++ V + A E
Sbjct: 1 MT-KILFMGTPDFSATVLKGLISDERYEILAVVTQPDRAAG-RKKEIRMTPVKEAALEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + L +V A L N HASLLP++RG
Sbjct: 59 LPIYQPEKLSGSQELEDLLALGADGIVTAAFGQFLPSRLLEAMKFSVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AIM GD E G+ IM+M + +D G + R +PI N L ++L+++ ++
Sbjct: 119 APIHYAIMNGDKEAGVTIMEMVREMDAGDMISSRAIPILEEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + L PQ +T++ I E R+++ R+ + N +R + P+P A
Sbjct: 179 ETLPAYLGGELKPQPQDPQQVTFSPNIKPEEERLDWTRTNRELFNQVRGMYPWPVAHT-- 236
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
K ER K+ +++ EG+G+PGE++ +A +GA+ + +Q AG + +GD
Sbjct: 237 --LWKGERFKIYQAKPCEGQGEPGEILALHKNEIVVATGEGALALTLVQPAGKPKMAVGD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGLGRQLQVGDQFG 310
>gi|281417282|ref|ZP_06248302.1| methionyl-tRNA formyltransferase [Clostridium thermocellum JW20]
gi|281408684|gb|EFB38942.1| methionyl-tRNA formyltransferase [Clostridium thermocellum JW20]
Length = 306
Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 95/310 (30%), Positives = 157/310 (50%), Gaps = 12/310 (3%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP-T 66
MGT EFA+ +L+ LV + + +V TQP +P G RG K+ + V + A + ++ L P
Sbjct: 1 MGTPEFAIPSLEMLVREGYEVAAVVTQPDKPKG-RGKKTAMPPVKEFAIKNNIEVLQPSK 59
Query: 67 KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
E D+ V AYG ++PQ +L+ G N H SLLP++RGAAPI AI
Sbjct: 60 VKTPEFVSTIRELRPDLLVTAAYGKILPQEVLDIPPYGCVNVHGSLLPKYRGAAPINWAI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ G+ TGI M D +DTG + ++ IS ++ L +L+ L A + E + K+E
Sbjct: 120 INGEKVTGITTMYTDAGMDTGDMLLKAEIEISDDMTAGELHDKLACLGAEVLRETLKKIE 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ L PQ TYA + K +N+ +SA +VHN +R +P+P A+ +
Sbjct: 180 DSTLQRIPQPHEQATYAPMLDKTVGCINWSKSARDVHNLVRGTNPWPVAFTYYKG----Q 235
Query: 247 RIKLLESQLVE---GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
++K+ + +++ PG ++ +AC G V I +Q R + + +++ G
Sbjct: 236 KMKVWMTSVLDEENHNFTPGTILKVGKDGLVVACGVGKVVIKEVQFDSSRRMTVEEYICG 295
Query: 301 CPVIIGCIVG 310
V G ++G
Sbjct: 296 HKVGEGEVLG 305
>gi|126172287|ref|YP_001048436.1| methionyl-tRNA formyltransferase [Shewanella baltica OS155]
gi|166215509|sp|A3CYK4|FMT_SHEB5 RecName: Full=Methionyl-tRNA formyltransferase
gi|125995492|gb|ABN59567.1| methionyl-tRNA formyltransferase [Shewanella baltica OS155]
Length = 318
Score = 182 bits (461), Expect = 7e-44, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 180/304 (59%), Gaps = 11/304 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL++S H+++ VYTQP RPAG RG K S V + A ++P
Sbjct: 3 PLNIIFAGTPDFAARHLQALLNSHHNVIGVYTQPDRPAG-RGKKLTASPVKELAVANNIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q L+ D+ VVVAYGL++P+ +L+ +LG N H S+LPRWRGAA
Sbjct: 62 VYQPGSLRKEPAQQELAALNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ +M+MD LDTG + +PI + +A L ++L+ A+++
Sbjct: 122 PIQRALWAGDKETGVTVMQMDVGLDTGDMLLKTTLPIEDSDTSASLYEKLAEQGPVALLQ 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ L L Q E YAEK+SK E R+++ +SA+ + +RA +P+P ++ E
Sbjct: 182 ALEGLANGTLAAEKQDEALANYAEKLSKEEARLDWNKSAQQLWQEVRAFNPWPVSYFE-- 239
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++ IK+ ++Q+ E PG +I +A + G + ++ +Q G + L++
Sbjct: 240 --HQGNTIKVWQTQVSETTSTAAPGTIISASKKGIEVATADGVLTLLNMQLPGKKPLNVA 297
Query: 296 DFLL 299
D L
Sbjct: 298 DILN 301
>gi|306826943|ref|ZP_07460243.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes ATCC
10782]
gi|304430961|gb|EFM33970.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes ATCC
10782]
Length = 311
Score = 182 bits (460), Expect = 7e-44, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 160/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +F+ L+ L+ + + I+ V TQP R G R ++ V + A E +
Sbjct: 2 IKLLFMGTPQFSATVLKGLLDNPAYEILGVVTQPDRAVG-RKKDIKVTPVKQLALEHGIS 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL + + ++ A +L + N HASLLP++RG AP
Sbjct: 61 IYQPEKLSGSQELIEIMGLGADGIITAAFGQFLPTLLLDSVSFAINVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM GD E G+ IM+M K +D G + PI N L ++L+++ ++++
Sbjct: 121 IHYAIMNGDKEAGVTIMEMIKEMDAGDMVAKASTPILETDNVGTLFEKLAIIGRDLLLDS 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L PQ + T++ IS ++++ S + V NHIR ++P+P A +
Sbjct: 181 LPAYLSGELKPIPQDHSQATFSPNISPEHEKLDWTMSNQEVFNHIRGMNPWPVAHTFLEG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R+K+ E+QL EGEG PG+VI + IA QGA+ ++ +Q AG + I DFL
Sbjct: 241 ----QRLKIYEAQLAEGEGLPGQVIVKTKKSLVIATGQGALSLIVVQPAGKPKMSIIDFL 296
Query: 299 L--GCPVIIGCIVG 310
G + +G I+G
Sbjct: 297 NGIGRKLEVGDIIG 310
>gi|194014601|ref|ZP_03053218.1| methionyl-tRNA formyltransferase [Bacillus pumilus ATCC 7061]
gi|194013627|gb|EDW23192.1| methionyl-tRNA formyltransferase [Bacillus pumilus ATCC 7061]
Length = 317
Score = 182 bits (460), Expect = 7e-44, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 164/317 (51%), Gaps = 13/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R+VFMGT +F+V LQ L++ + +V V TQP RP G R V +A + +
Sbjct: 1 MA-RIVFMGTPDFSVPVLQTLITEGYEVVGVVTQPDRPKG-RKRVLTPPPVKVEALKHGI 58
Query: 61 PALVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ +E + + D+ V A+G ++P+R+L+ + G N HASLLP RG
Sbjct: 59 TVLQPEKVRLDEEIDKVLALKPDLIVTAAFGQILPKRLLDEPQFGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G +TG+ IM M + LD G + +V I N L +LSV A +
Sbjct: 119 APIHYAILQGKKKTGVTIMYMVERLDAGDMISKVEVEIDELDNVGTLHDKLSVAGAALLK 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + ++ PQ E TYA I + + R+++ ++ E ++N +R L+P+P A+ E
Sbjct: 179 DTVPNVLNGSISPIPQNEEAATYAPNIKREQERIDWAKTGEELYNQVRGLNPWPVAYTEW 238
Query: 240 MIGNKHERIKLLESQ--LVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLD 293
+ +K+ E++ +E + +PG+VI I + + +Q AG + +
Sbjct: 239 NGAH----LKVWEAKKVPLEAQEEPGKVIELQKEGPVIGTGNKQGLLLTGVQPAGKKKMS 294
Query: 294 IGDFLLGCPVIIGCIVG 310
DFL G + +G +G
Sbjct: 295 GEDFLRGANIEMGQKLG 311
>gi|160873156|ref|YP_001552472.1| methionyl-tRNA formyltransferase [Shewanella baltica OS195]
gi|189044560|sp|A9KUA1|FMT_SHEB9 RecName: Full=Methionyl-tRNA formyltransferase
gi|160858678|gb|ABX47212.1| methionyl-tRNA formyltransferase [Shewanella baltica OS195]
gi|315265381|gb|ADT92234.1| methionyl-tRNA formyltransferase [Shewanella baltica OS678]
Length = 318
Score = 182 bits (460), Expect = 7e-44, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 180/304 (59%), Gaps = 11/304 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL++S H+++ VYTQP RPAG RG K S V + A ++P
Sbjct: 3 PLNIIFAGTPDFAARHLQALLNSHHNVIGVYTQPDRPAG-RGKKLTASPVKELAVANNIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q L+ D+ VVVAYGL++P+ +L+ +LG N H S+LPRWRGAA
Sbjct: 62 VYQPGSLRKEPAQQELAALNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ +M+MD LDTG + +PI + +A L ++L+ A+++
Sbjct: 122 PIQRALWAGDKETGVTVMQMDVGLDTGDMLLKTTLPIEDSDTSASLYEKLAEQGPVALLQ 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ L L Q E YAEK+SK E R+++ +SA+ + +RA +P+P ++ E
Sbjct: 182 ALEGLVNGTLAAEKQDEALANYAEKLSKEEARLDWNKSAQQLWQEVRAFNPWPVSYFE-- 239
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++ IK+ ++Q+ E PG +I +A + G + ++ +Q G + L++
Sbjct: 240 --HQGNTIKVWQTQVSETTSTAAPGTIISASKKGIEVATADGVLTLLNMQLPGKKPLNVA 297
Query: 296 DFLL 299
D L
Sbjct: 298 DILN 301
>gi|310642739|ref|YP_003947497.1| methionyl-tRNA formyltransferase [Paenibacillus polymyxa SC2]
gi|309247689|gb|ADO57256.1| Methionyl-tRNA formyltransferase [Paenibacillus polymyxa SC2]
Length = 319
Score = 182 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 102/320 (31%), Positives = 167/320 (52%), Gaps = 11/320 (3%)
Query: 1 MT--LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M+ +R++FMGT EFAV +L L+ + +++V V TQP +P G R + V + A++
Sbjct: 1 MSQDIRIIFMGTPEFAVPSLNMLLDNGYNVVGVITQPDKPQG-RKKILTPTPVKEAAEKR 59
Query: 59 SLPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L PT+ E Q D+ V AYG ++P+ +L+ + G N H SLLPR+R
Sbjct: 60 GLPVLQPTRLRQPEAVAQVAELRPDLIVTAAYGQILPKSVLDLPRFGCLNVHGSLLPRYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
G APIQRAI+ G+ TG+ +M M + LDTG + +V I + + ++LSV+ A
Sbjct: 120 GGAPIQRAIINGETVTGVTLMYMAEGLDTGDMISRVEVAIEPEDTSGTIFEKLSVVGARL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ + + KL +PQ E+ TYA +++ + R+ + +A+ ++N IR L PF GA+
Sbjct: 180 LQDELPKLLAGQSDRTPQNEDEATYAPNLNRDDERITWSDNAQQIYNRIRGLVPFSGAFT 239
Query: 238 EMMIGNKHERIKLLESQLVEGEG----KPGEVIN---PNFTIACSQGAVRIMRLQRAGGR 290
S E G PG V+ + +G + + ++Q AG +
Sbjct: 240 LWENNVFKIWAAEQPSINNEASGSNAPAPGTVLQLTARGIEVQTGKGTLWLTQVQPAGKK 299
Query: 291 VLDIGDFLLGCPVIIGCIVG 310
V++ G F G + G ++G
Sbjct: 300 VMEAGTFARGGQMKPGTVLG 319
>gi|84685503|ref|ZP_01013401.1| methionyl-tRNA formyltransferase [Maritimibacter alkaliphilus
HTCC2654]
gi|84666660|gb|EAQ13132.1| methionyl-tRNA formyltransferase [Rhodobacterales bacterium
HTCC2654]
Length = 299
Score = 182 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 152/304 (50%), Positives = 191/304 (62%), Gaps = 9/304 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMG+ +F+V L ALV++ H +V VY QPPRPAG RG K + V +A+ LP
Sbjct: 1 MKVIFMGSPDFSVPVLDALVAAGHEVVCVYCQPPRPAG-RGKKDRPTPVQVRAEALGLPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G+ E +F + ADVAVVVAYGL++PQ +L+A G N HASLLPRWRGAAP
Sbjct: 60 RHPISLKGEVEQAEFAALGADVAVVVAYGLILPQAVLDAPAKGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD ETG+ IM+M+ LDTGPV R V I + T L LS L A +VEA
Sbjct: 120 IHRAIMAGDAETGVCIMQMEAGLDTGPVLIRRAVEIGAEETTGELHDRLSALGAETIVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + Q E+G+TYAEKI K E RV++ R A + IR LSPFPGAW EM
Sbjct: 180 L--AALDGMTPEVQPEDGVTYAEKIDKAEARVDWTRPAAEIDRLIRGLSPFPGAWCEM-- 235
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
R+KLL S+LV G G PG VI P T+AC GAV I R Q+ GGR +D G+FL G
Sbjct: 236 --DGVRVKLLGSRLVAGSGAPGAVIGP-LTVACGDGAVEITRAQKPGGRGMDAGEFLRGF 292
Query: 302 PVII 305
+
Sbjct: 293 QIPE 296
>gi|319744302|gb|EFV96666.1| methionyl-tRNA formyltransferase [Streptococcus agalactiae ATCC
13813]
Length = 311
Score = 182 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 93/316 (29%), Positives = 158/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ +++ + +++V TQP R G R + ++ V + A E +
Sbjct: 1 MT-KLLFMGTPDFSATVLKGILADGKYDVLAVVTQPDRAVG-RKKEIKMTPVKEVALENN 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P KL + L +V A L + N HASLLP++RG
Sbjct: 59 IPVYQPEKLSGSPELEQLMPLGADGIVTAAFGQFLPTKLLESVGFAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G+ E G+ IM+M +D G + V I+ N + L+V+ ++
Sbjct: 119 APIHYAIINGEKEAGVTIMEMVAKMDAGDMVSKASVEITDEDNVGTMFDRLAVVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ E ++++ IS E R+++ +S+ ++ NH+R + P+P A +
Sbjct: 179 DTLPGYLSGDIKPIPQNEEEVSFSPNISPDEERIDWNKSSRDIFNHVRGMYPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R KL E + EG+G PG+VI + T+A GA+ + +Q AG +DI
Sbjct: 239 EGN----RFKLYEVTMSEGKGSPGQVIAKTKNSLTVATGDGAIELKSVQPAGKPRMDIKA 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + IG G
Sbjct: 295 FLNGVGRNLEIGDKFG 310
>gi|299531892|ref|ZP_07045292.1| methionyl-tRNA formyltransferase [Comamonas testosteroni S44]
gi|298720067|gb|EFI61024.1| methionyl-tRNA formyltransferase [Comamonas testosteroni S44]
Length = 321
Score = 182 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 126/320 (39%), Positives = 182/320 (56%), Gaps = 17/320 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT EFA L++L+++ + V TQP RPAG RG+K S V + A E +
Sbjct: 1 MKVIFAGTPEFARVALESLLAAGFEVPLVLTQPDRPAG-RGMKLQASPVKQCALEHGIAV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ + ADV VV AYGL++PQ +L+ +LG N HASLL
Sbjct: 60 AQPLSLRLDGKYPEDAAAAKAAIDAAQADVMVVAAYGLILPQWVLDTPRLGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RAI AGD ETG+ IM+MD LDTG + + ++PI++ TA LQ +L+ L
Sbjct: 120 PRWRGAAPIHRAIEAGDAETGVTIMQMDAGLDTGDMCVIERLPIAAGDTTASLQDKLAAL 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+VEA++ L +PQ +G++YA KI K E+ +++ SAE + +RA +PFP
Sbjct: 180 GGRLIVEALEMAACGGLSRTPQPADGVSYAHKIEKAESLIDWNESAEVIARRLRAFNPFP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGR 290
G + E IK+ E++ +G G PG V++ +AC G + + LQRAGG+
Sbjct: 240 GGATSLGG----EAIKVWEAEAQQGSGAPGSVLSADVRGVRVACGSGVLNMTLLQRAGGK 295
Query: 291 VLDIGDFLLGCPVIIGCIVG 310
L GDFL G + G +G
Sbjct: 296 RLAAGDFLRGFELPAGAQLG 315
>gi|229530169|ref|ZP_04419558.1| methionyl-tRNA formyltransferase [Vibrio cholerae 12129(1)]
gi|229332302|gb|EEN97789.1| methionyl-tRNA formyltransferase [Vibrio cholerae 12129(1)]
gi|327482956|gb|AEA77363.1| Methionyl-tRNA formyltransferase [Vibrio cholerae LMA3894-4]
Length = 315
Score = 182 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 117/316 (37%), Positives = 178/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAG-RGKKLTASPVKTLALEHNVP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ IM+MD LDTG + + +PI ++ +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q Q + YA K+SK E R+N+ +A ++ IRA +P+P + E+
Sbjct: 183 CLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ ++++ PG ++ +A QG + + LQ G + L +
Sbjct: 243 ENS----IKVWQARVETHAVTQAPGTIVQADKSGIYVATGQGVLVLESLQIPGKKALPVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G +
Sbjct: 299 DILNARADWFSVGSQL 314
>gi|220933383|ref|YP_002512282.1| methionyl-tRNA formyltransferase [Thioalkalivibrio sp. HL-EbGR7]
gi|219994693|gb|ACL71295.1| methionyl-tRNA formyltransferase [Thioalkalivibrio sp. HL-EbGR7]
Length = 318
Score = 182 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 119/315 (37%), Positives = 170/315 (53%), Gaps = 12/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+V+ GT EFAV LQAL+ S H +V+VYTQP RPAG RG K S + A E +P
Sbjct: 6 KLRIVYAGTPEFAVPALQALIDSPHDVVAVYTQPDRPAG-RGRKLTPSPIKHLALEHGIP 64
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E + ++ DV VV AYGL++P+ +L K G N HASLLPRWRGAA
Sbjct: 65 VEQPERLKPPEVQARLRAYAPDVMVVAAYGLILPRAVLEIPKHGCLNIHASLLPRWRGAA 124
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI+AGD ETG+ +M+M LDTG + PI L L+ A +++
Sbjct: 125 PIQRAILAGDAETGVTLMQMAAGLDTGDMLLKAVTPIGPGDTAQELHDRLAEQGAQLLLD 184
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L+ L PQ E TYAEK+SK E +++ SA + +RA +P+P A+ +
Sbjct: 185 CLEDLQAGRLRPEPQDEALATYAEKLSKAEAELDWFLSAAALDRQVRAFNPWPVAFTHL- 243
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINP---NFTIACSQGAVRIMRLQRAGGRVLDIG 295
E +++ + V PG V+ +A +G +R+ R+Q GGR L
Sbjct: 244 ---DGETLRIWAAAPVASTVTATPGTVVAEGPQGIDVATGEGLLRLTRIQFPGGRPLTAE 300
Query: 296 DFLLGCPVIIGCIVG 310
+ G ++ G +G
Sbjct: 301 QVVAGRSLL-GKRLG 314
>gi|322388305|ref|ZP_08061909.1| methionyl-tRNA formyltransferase [Streptococcus infantis ATCC
700779]
gi|321140977|gb|EFX36478.1| methionyl-tRNA formyltransferase [Streptococcus infantis ATCC
700779]
Length = 311
Score = 182 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 156/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT F+ L+ L+ + IV+V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPNFSATVLKGLLSDDRYEIVAVVTQPDRAVG-RKKVIQGTPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + +V A L + N HASLLP+ RG
Sbjct: 59 LPIYQPEKLSGSPEMEAIINLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDKEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLAIVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + Q + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGEIQPQSQDPSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
ER K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KG----ERFKIYEALPVEGQGTPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRSLAVGERFG 310
>gi|156972727|ref|YP_001443634.1| methionyl-tRNA formyltransferase [Vibrio harveyi ATCC BAA-1116]
gi|166215597|sp|A7N122|FMT_VIBHB RecName: Full=Methionyl-tRNA formyltransferase
gi|156524321|gb|ABU69407.1| hypothetical protein VIBHAR_00392 [Vibrio harveyi ATCC BAA-1116]
Length = 315
Score = 182 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 111/316 (35%), Positives = 175/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E +P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKTIALEHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDEAKQELADLNADIMVVVAYGLLLPQVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI ++ +A + ++L+ L A+++
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEASDTSASMYEKLAGLGPDALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K+SK E R+++ A ++ +RA +P+P + E
Sbjct: 183 CLADIAAGKAKPVKQDDELANYAKKLSKEEARIDWNDDAAHIERCVRAFNPWPMSHFEAA 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S++ E + G ++ + G + + +LQ G + + +
Sbjct: 243 ENS----IKVWQSRVEEQTSDKPAGTILQADKTGIYVVTGNGVLVLEQLQVPGKKAMSVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G +
Sbjct: 299 DILNSRASWFEVGTQL 314
>gi|264680863|ref|YP_003280773.1| methionyl-tRNA formyltransferase [Comamonas testosteroni CNB-2]
gi|262211379|gb|ACY35477.1| methionyl-tRNA formyltransferase [Comamonas testosteroni CNB-2]
Length = 321
Score = 182 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 126/320 (39%), Positives = 182/320 (56%), Gaps = 17/320 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT EFA L++L+++ + V TQP RPAG RG+K S V + A E +
Sbjct: 1 MKVIFAGTPEFARVALESLLAAGFEVPLVLTQPDRPAG-RGMKLQASPVKQCALEHGIAV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ + ADV VV AYGL++PQ +L+ +LG N HASLL
Sbjct: 60 AQPLSLRLDGKYPEDAAAAKAAIDAAQADVMVVAAYGLILPQWVLDTPRLGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RAI AGD ETG+ IM+MD LDTG + + ++PI++ TA LQ +L+ L
Sbjct: 120 PRWRGAAPIHRAIEAGDAETGVTIMQMDAGLDTGDMCVIERLPIAAGDTTASLQDKLAAL 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+VEA++ L +PQ +G++YA KI K E+ +++ SAE + +RA +PFP
Sbjct: 180 GGRLIVEALEMAACGGLSRTPQPADGVSYAHKIEKAESLIDWSESAEVIARRLRAFNPFP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGR 290
G + E IK+ E++ +G G PG V++ +AC G + + LQRAGG+
Sbjct: 240 GGATSLGG----EAIKVWEAEAQQGSGAPGSVLSADARGVRVACGSGVLNMTLLQRAGGK 295
Query: 291 VLDIGDFLLGCPVIIGCIVG 310
L GDFL G + G +G
Sbjct: 296 RLAAGDFLRGFELPAGAQLG 315
>gi|323350302|ref|ZP_08085967.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis VMC66]
gi|322123487|gb|EFX95158.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis VMC66]
Length = 313
Score = 182 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 89/317 (28%), Positives = 157/317 (49%), Gaps = 12/317 (3%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M + +++FMGT +F+ L+ L+ + +++V TQP R G R + ++ V + A E+
Sbjct: 1 MKMMKIIFMGTPDFSATVLKGLLDCGQYQVLAVVTQPDRAVG-RKREIRMTPVKELALEY 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
L P KL Q + L +V A L + N HASLLP++RG
Sbjct: 60 GLQVYQPEKLAQSSDLEELMNLEADGIVTAAFGQFLPSRLLDSVDFAVNVHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API A++ GD + G+ IM+M K +D G + + PI N L ++L+++ +
Sbjct: 120 GAPIHYALINGDEQAGVTIMEMVKEMDAGDMIASKATPIEETDNVGTLFEKLAIIGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + + PQ + +T++ IS E R+++ ++ + N IR + P+P A
Sbjct: 180 LDVLPAYRAGQIIPQPQDPSQVTFSPNISPEEERIDWSKTNRQIFNQIRGMYPWPVAHTL 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +R K+ E+ +V G G+PG+++ +A +GA+ + +Q AG + I
Sbjct: 240 LQG----QRFKIYEADMVAGSGQPGQILSISKKELVVAAGKGALSLKTVQPAGKPKMAIV 295
Query: 296 DFLL--GCPVIIGCIVG 310
DFL G + IG G
Sbjct: 296 DFLNGLGRSLSIGDTFG 312
>gi|114770093|ref|ZP_01447631.1| methionyl-tRNA formyltransferase [alpha proteobacterium HTCC2255]
gi|114548930|gb|EAU51813.1| methionyl-tRNA formyltransferase [alpha proteobacterium HTCC2255]
Length = 300
Score = 182 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 138/303 (45%), Positives = 192/303 (63%), Gaps = 9/303 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMG+ EF+V L +++S+ H +V+VY QPPRPAG RG K L+ VH A E L
Sbjct: 1 MRIIFMGSPEFSVPILSSIISAGHDVVAVYCQPPRPAG-RGKKERLTPVHSHALELGLDV 59
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P +E F + AD+AVVVAYGL++PQ IL++ G N HASLLPRWRGAAP
Sbjct: 60 RHPVNFKSKEAVSDFAALKADIAVVVAYGLILPQEILDSVDKGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAI++GD TGI IM+MD LDTG V + ++ I + TA L L+ + + +V+
Sbjct: 120 IHRAIISGDASTGICIMQMDAGLDTGDVLYHKETEILPSDTTAVLHDRLAHIGSQCIVDV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ K L PQ + GI YA KI K E+++++ +SA + IR LSPFPGAW
Sbjct: 180 LKKYA--FLEAVPQSDIGIIYASKIDKNESKIDWNKSAIEIDRQIRGLSPFPGAWF---- 233
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+ +R+K+L S++VEG G PGE+++ TIAC GA+++ RLQRAG +DI +FLLG
Sbjct: 234 DDGEQRVKVLMSEVVEGSGFPGEILDHA-TIACQSGALKLTRLQRAGKGAMDIKNFLLGY 292
Query: 302 PVI 304
Sbjct: 293 NFP 295
>gi|15675504|ref|NP_269678.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes M1 GAS]
gi|71911151|ref|YP_282701.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes MGAS5005]
gi|21542055|sp|Q99YM7|FMT_STRP1 RecName: Full=Methionyl-tRNA formyltransferase
gi|13622701|gb|AAK34399.1| putative methionyl tRNA formyltransferase [Streptococcus pyogenes
M1 GAS]
gi|71853933|gb|AAZ51956.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes MGAS5005]
Length = 311
Score = 182 bits (460), Expect = 9e-44, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 160/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +F+ L+ L+ + + I+ V TQP R G R ++ V + A E +
Sbjct: 2 IKLLFMGTPQFSATVLKGLLDNPAYEILGVVTQPDRAVG-RKKDIKVTPVKQLALEHGIS 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL + + ++ A IL + N HASLLP++RG AP
Sbjct: 61 IYQPEKLSGSQELIEIMGLGADGIITAAFGQFLPTILLDSVSFAINVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM GD E G+ IM+M K +D G + PI N L ++L+++ ++++
Sbjct: 121 IHYAIMNGDKEAGVTIMEMIKEMDAGDMVAKASTPILETDNVGTLFEKLAIIGRDLLLDS 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L PQ + T++ IS ++++ S + V NHIR ++P+P A +
Sbjct: 181 LPAYLSGELKPIPQDHSQATFSPNISPEHEKLDWTMSNQEVFNHIRGMNPWPVAHTFLEG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R+K+ E+QL EGEG PG+V+ + IA QGA+ ++ +Q AG + I DFL
Sbjct: 241 ----QRLKIYEAQLAEGEGLPGQVVVKTKKSLVIATGQGALSLIVVQPAGKPKMSIIDFL 296
Query: 299 L--GCPVIIGCIVG 310
G + +G I+G
Sbjct: 297 NGIGRKLEVGDIIG 310
>gi|304412734|ref|ZP_07394337.1| methionyl-tRNA formyltransferase [Shewanella baltica OS183]
gi|307305801|ref|ZP_07585547.1| methionyl-tRNA formyltransferase [Shewanella baltica BA175]
gi|304348944|gb|EFM13359.1| methionyl-tRNA formyltransferase [Shewanella baltica OS183]
gi|306911294|gb|EFN41720.1| methionyl-tRNA formyltransferase [Shewanella baltica BA175]
Length = 318
Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats.
Identities = 113/304 (37%), Positives = 179/304 (58%), Gaps = 11/304 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL++S H+++ VYTQP RPAG RG K S V + A ++P
Sbjct: 3 PLNIIFAGTPDFAARHLQALLNSHHNVIGVYTQPDRPAG-RGKKLTASPVKELAVANNIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q L+ D+ VVVAYGL++P+ +L+ +LG N H S+LPRWRGAA
Sbjct: 62 VYQPGSLRKEPAQQELAALNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ +M+MD LDTG + + I + +A L ++L+ A+++
Sbjct: 122 PIQRALWAGDKETGVTVMQMDVGLDTGDMLLKTYLSIEDSDTSASLYEKLAEQGPVALLQ 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ L L Q E YAEK+SK E R+++ +SA+ + +RA +P+P ++ E
Sbjct: 182 ALEGLANGTLAAEKQDEALANYAEKLSKEEARLDWNKSAKQLWQEVRAFNPWPVSYFE-- 239
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++ IK+ ++Q+ E PG +I +A + G + ++ +Q G + L++
Sbjct: 240 --HQGNTIKVWQTQVSETTSTAAPGTIISASKKGIEVATADGVLTLLSMQLPGKKPLNVA 297
Query: 296 DFLL 299
D L
Sbjct: 298 DILN 301
>gi|94988963|ref|YP_597064.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes MGAS9429]
gi|94992856|ref|YP_600955.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes MGAS2096]
gi|139473324|ref|YP_001128039.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes str.
Manfredo]
gi|123080380|sp|Q1JKP9|FMT_STRPC RecName: Full=Methionyl-tRNA formyltransferase
gi|123382271|sp|Q1JAJ7|FMT_STRPB RecName: Full=Methionyl-tRNA formyltransferase
gi|166215518|sp|A2RD70|FMT_STRPG RecName: Full=Methionyl-tRNA formyltransferase
gi|94542471|gb|ABF32520.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes MGAS9429]
gi|94546364|gb|ABF36411.1| Methionyl-tRNA formyltransferase [Streptococcus pyogenes MGAS2096]
gi|134271570|emb|CAM29795.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes str.
Manfredo]
Length = 311
Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 161/314 (51%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +F+ L+ L+ + + I+ V TQP R G R ++ V + A E +
Sbjct: 2 IKLLFMGTPQFSATVLKGLLDNPAYEILGVVTQPDRAVG-RKKDIKVTPVKQLALEHGIS 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL + + ++ A +L + N HASLLP++RG AP
Sbjct: 61 IYQPEKLSGSQELIEIMGLGADGIITAAFGQFLPTLLLDSVSFAINVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM GD E G+ IM+M K +D G + PI N L ++L+++ ++++
Sbjct: 121 IHYAIMNGDKEAGVTIMEMIKEMDAGDMVAKASTPILETDNVGTLFEKLAIIGRDLLLDS 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L PQ + T++ IS + ++++ S + V NHIR ++P+P A +
Sbjct: 181 LPAYLSGELKPIPQDHSQATFSPNISPEQEKLDWTMSNQEVFNHIRGMNPWPVAHTFLEG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R+K+ E+QL EGEG PG+VI + IA QGA+ ++ +Q AG + I DFL
Sbjct: 241 ----QRLKIYEAQLAEGEGLPGQVIVKTKKSLVIATGQGALSLIVVQPAGKPKMSIIDFL 296
Query: 299 L--GCPVIIGCIVG 310
G + +G I+G
Sbjct: 297 NGIGRKLEVGDIIG 310
>gi|86147130|ref|ZP_01065446.1| methionyl-tRNA formyltransferase [Vibrio sp. MED222]
gi|85835014|gb|EAQ53156.1| methionyl-tRNA formyltransferase [Vibrio sp. MED222]
Length = 321
Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats.
Identities = 112/318 (35%), Positives = 178/318 (55%), Gaps = 11/318 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKNIALENNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++PQ +L+ +LG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDEAKQELADLNADIMVVVAYGLLLPQAVLDTPRLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI + +A + ++L+ L A+VE
Sbjct: 123 PIQRSIWAGDKETGVTIMQMDIGLDTGDMLSIATLPIEATDTSASMYEKLAGLGPDALVE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K+SK E ++++ SAE++ +RA +P+P + ++
Sbjct: 183 CLADIASGKAVAEKQDDELANYAKKLSKEEAKIDWNDSAEHIERCVRAFNPWPMSHFAIV 242
Query: 241 I--GNKHERIKLLESQLVE--GEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGRVLD 293
+ + IK+ ++++ E G +I +A + + +LQ G + +
Sbjct: 243 DSSSSDEKSIKVWQTRVDEESTSAPAGSIIKADKTGIYVATGDKVLVLEQLQVPGKKAMS 302
Query: 294 IGDFLLGCP--VIIGCIV 309
+ D L +G +
Sbjct: 303 VQDILNSRASWFEVGTQL 320
>gi|312867817|ref|ZP_07728022.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis
F0405]
gi|311096572|gb|EFQ54811.1| methionyl-tRNA formyltransferase [Streptococcus parasanguinis
F0405]
Length = 311
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 100/316 (31%), Positives = 158/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ S + I++V TQP R G R + ++ V + A E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLADSRYKILAVVTQPDRKVG-RKKEIRMTPVKQVALEHQ 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP L P KL + L +V A L N HASLLP++RG
Sbjct: 59 LPVLQPEKLSGSPEMETLLSLDADGIVTAAFGQFLPTKLLENFQFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI N L ++L+VL ++
Sbjct: 119 APIHYALINGDEEAGVTIMEMVKEMDAGDMIAARSLPILDEDNVGTLFEKLAVLGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + SPQ + +T++ I E +++ ++ V N IR ++P+P A +
Sbjct: 179 DTLPAYLAGEIKPSPQDPSLVTFSPNILPEEEVLDWTKTNRQVFNQIRGMNPWPAAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E++L EG G PGEVI +A +GA+ + +Q AG + I D
Sbjct: 239 ----NGQRFKVYEAELCEGNGNPGEVIALTKKELVVAAGEGALSLKVVQPAGKPKMSITD 294
Query: 297 FLLGC--PVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGAGRQLKVGDHFG 310
>gi|307708279|ref|ZP_07644746.1| methionyl-tRNA formyltransferase [Streptococcus mitis NCTC 12261]
gi|307615725|gb|EFN94931.1| methionyl-tRNA formyltransferase [Streptococcus mitis NCTC 12261]
Length = 311
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 91/316 (28%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + +V A L + N HASLLP+ RG
Sbjct: 59 LPIYQPEKLSGSPEMEAIMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGEIKPEPQDPSQVTFSLNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSTGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|307710616|ref|ZP_07647050.1| methionyl-tRNA formyltransferase [Streptococcus mitis SK564]
gi|307618661|gb|EFN97803.1| methionyl-tRNA formyltransferase [Streptococcus mitis SK564]
Length = 311
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 91/316 (28%), Positives = 158/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ ++ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGILTDERYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + +V A L + N HASLLP+ RG
Sbjct: 59 LPIYQPEKLSGSPEMETIMQLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ + +T++ I E ++++ +S + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGDIKPEPQDPSQVTFSPNIKPEEEKLDWNKSNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|258622989|ref|ZP_05718004.1| methionyl-tRNA formyltransferase [Vibrio mimicus VM573]
gi|258584772|gb|EEW09506.1| methionyl-tRNA formyltransferase [Vibrio mimicus VM573]
Length = 315
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 119/314 (37%), Positives = 173/314 (55%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAG-RGKKLTASPVKTLALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P EE +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSEESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ IM+MD LDTG + + +PI S+ +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIESSDTSASMYDKLAELGPQALLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q Q + YA K+SK E R+N+ A ++ IRA +P+P + E
Sbjct: 183 CLQDIAQGTAVAVKQDDALANYAHKLSKEEARINWNDEAVHIERCIRAFNPWPMSHFEAA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E++ V PG +I +A Q + + LQ G + L + D
Sbjct: 243 ENSIKVWQARVETRAVND--TPGTIIQADKSGIYVATGQDVLVLESLQIPGKKALPVQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNARADWFSVGSQL 314
>gi|332707357|ref|ZP_08427407.1| methionyl-tRNA formyltransferase [Lyngbya majuscula 3L]
gi|332353848|gb|EGJ33338.1| methionyl-tRNA formyltransferase [Lyngbya majuscula 3L]
Length = 333
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 106/332 (31%), Positives = 153/332 (46%), Gaps = 25/332 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+RVVF GT +FA+ L+ L++ +V V TQP + G RG + + S V A LP
Sbjct: 1 MRVVFFGTPQFALPCLEGLLNHPEFEVVGVVTQPDKRRG-RGNQLIPSPVKSIALAHKLP 59
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P +L + Q AD VVVAYG ++ Q IL+ G N H S+LP++RGA
Sbjct: 60 VWQPQRLKKHRETLTQLRQVKADAFVVVAYGQILSQEILDMPTAGCINVHGSILPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ + G+ +TGI M MD +DTG + PI N L Q LS L A ++
Sbjct: 120 APIQWCLYNGEAQTGITTMLMDAGMDTGAMLLKAYTPIRLLDNAQDLAQTLSNLGADLLI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + K E + PQ ++ TYA I K + +++ RS +HN IR P
Sbjct: 180 ETLLKQELQEIQPIPQDDSLATYAPLIQKSDYGLDWSRSNLELHNQIRGFFPNCVTSFRG 239
Query: 240 MIGNKHERIKLLESQLVE-----------------GEGKPGEVINP----NFTIACSQGA 278
+ L + L E G G+PGEV+ I +G
Sbjct: 240 KSLKISATVPLDSAYLSELPSQLKMRSQEWSTLDVGSGRPGEVVKIAKTIGPIIQTGKGM 299
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ + ++Q AG R DF G + +G ++G
Sbjct: 300 LLLQQVQLAGKRAQSAWDFANGMRLEVGEVLG 331
>gi|323489536|ref|ZP_08094763.1| methionyl-tRNA formyltransferase [Planococcus donghaensis MPA1U2]
gi|323396667|gb|EGA89486.1| methionyl-tRNA formyltransferase [Planococcus donghaensis MPA1U2]
Length = 310
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 98/313 (31%), Positives = 159/313 (50%), Gaps = 8/313 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT F+ L+ LV + ++SV TQP RP G R + V ++A L
Sbjct: 1 MT-KIIFMGTPAFSAPILRMLVEEGYEVISVVTQPDRPVG-RKKVMTATPVKEEALRLGL 58
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K ++E + L AD+ V A+G ++P +L A LG N HASLLP +RG
Sbjct: 59 PIYQPEKLKNKDELQHVLDMGADLIVTAAFGQILPSELLEAPSLGAINVHASLLPEYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API ++I+ G ++TG+ IM M LD G + VPI +T + ++LS+ +
Sbjct: 119 APIHQSIIDGQDKTGVTIMYMVDRLDAGDIISQVTVPIEEQDHTGSMFEKLSIAGRDLLK 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + PQ E +TYA IS+ + R+++ +SA ++N +R L P+P A+ +
Sbjct: 179 STLPSIIAGTNKRIPQDEQLVTYARNISREQERIDWSQSATAIYNQVRGLHPWPVAYTSV 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+I E +G+ GEV+ + +G + I LQ AG + + D
Sbjct: 239 --NGATIKIWWTEKTASSAKGQTGEVVELTEDAILVQTGEGVLAITELQPAGKKRMTAKD 296
Query: 297 FLLGCPVIIGCIV 309
+L G + +G +
Sbjct: 297 YLKGPKIQVGDLF 309
>gi|307294616|ref|ZP_07574458.1| methionyl-tRNA formyltransferase [Sphingobium chlorophenolicum L-1]
gi|306879090|gb|EFN10308.1| methionyl-tRNA formyltransferase [Sphingobium chlorophenolicum L-1]
Length = 302
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 133/307 (43%), Positives = 176/307 (57%), Gaps = 9/307 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+V+MGT +FAV L AL + H IV+ Y+QPPRPAG RG S VH KA+E +
Sbjct: 1 MRIVYMGTPDFAVPALVALAKAGHEIVAAYSQPPRPAG-RGKALRPSPVHAKAEEMGVEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + F + NADVAVV AYGL++PQ IL+A + G N HASLLPRWRGAAP
Sbjct: 60 RTPVSLKDADVQAAFAALNADVAVVAAYGLILPQPILDAPRFGCMNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+AGDN TG+ IM M+ LDTGP+ PI A Q+ +
Sbjct: 120 IQRAILAGDNVTGVTIMDMEAGLDTGPMRAKHVTPIEGKTAGALTQELADAGAELMVEVL 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
D + P PQ E G+TYA KI K E+R++F A V H+RA +PFPGA+ E
Sbjct: 180 DDIGQH---PPVPQPEEGVTYASKIDKAESRIHFGYDAHQVERHVRAFNPFPGAFFEY-- 234
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+ ER ++L + + E EG GE+++ + I C GA+R +QRAG + G+ L G
Sbjct: 235 --RGERFRILAAHVEEHEGPAGELLDNSLLIGCGHGAIRPTLIQRAGKGAMSAGELLRGY 292
Query: 302 PVIIGCI 308
+ G
Sbjct: 293 DMPAGSR 299
>gi|239617142|ref|YP_002940464.1| methionyl-tRNA formyltransferase [Kosmotoga olearia TBF 19.5.1]
gi|259646038|sp|C5CG19|FMT_KOSOT RecName: Full=Methionyl-tRNA formyltransferase
gi|239505973|gb|ACR79460.1| methionyl-tRNA formyltransferase [Kosmotoga olearia TBF 19.5.1]
Length = 311
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 109/315 (34%), Positives = 181/315 (57%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FA L+ LV +++V V++QP +P G RG K + + V + A+E+ +P
Sbjct: 1 MKIVFMGTPDFAAEHLRKLVEKKYNVVGVFSQPDKPKG-RGKKLIPTPVKQVAREYGIPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + E + L D+ + VAYG ++ Q++ LG YN HASLLP++RGAAP
Sbjct: 60 FQPKSVNKGEGFEALKELKPDIIITVAYGKLLKQQVFELPPLGCYNVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+ G+ ETGI I K+D+ +D+GP+A ++ ISS+ N L+++L L ++E
Sbjct: 120 IQRALENGEKETGITIFKIDEGMDSGPIALQERIEISSDDNFGTLKKKLCNLGKKLLIEF 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ K+ + L+PQ + TYA KI+K +T + + E V N IRA P PG +
Sbjct: 180 LKKISAGEIKLTPQDHSQATYAPKITKEDTILIEFDNGERVFNKIRAYDPEPGVTTRLGE 239
Query: 242 GNKHERIKLLESQLVEG---EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
R+KL + + + + +PG++I + +AC +GAV+I ++Q G +V+ +
Sbjct: 240 ----LRVKLFGAGICDNCCVDAEPGQIISISKDSMVVACKKGAVKISKIQFPGKKVITVW 295
Query: 296 DFLLGCPVIIGCIVG 310
G + G +G
Sbjct: 296 QAKSGRLIEEGIKLG 310
>gi|332523518|ref|ZP_08399770.1| methionyl-tRNA formyltransferase [Streptococcus porcinus str.
Jelinkova 176]
gi|332314782|gb|EGJ27767.1| methionyl-tRNA formyltransferase [Streptococcus porcinus str.
Jelinkova 176]
Length = 310
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 91/316 (28%), Positives = 158/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ ++S + I++V TQP R G R + ++ V + A ++
Sbjct: 1 MT-KIIFMGTPQFSATVLEGIISEGSYEILAVVTQPDRAVG-RKKEIRMTPVKELALKYD 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP + P KL + + + ++ A L N HASLLP++RG
Sbjct: 59 LPLIQPEKLSGSQELEEMIALCADGIITAAFGQFLPSKLLNAVDFALNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AIM G+ E G+ IM+M K +D G + PI N L ++L+++ ++
Sbjct: 119 APIHYAIMNGEKEAGVTIMEMVKEMDAGDMVAKASTPILDTDNVGTLFEKLAIVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + L PQ + T++ I+ + +++ + A + N +R ++P+P A +
Sbjct: 179 KTLPQYLSGALKPIPQDHSQATFSPNITAEQEKIDLSQPARQIFNQVRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ + LVEG+G PG++I N IA GA+ + +Q AG + I D
Sbjct: 239 KG----QRFKIYDVSLVEGQGHPGQIIEKTKKNLVIATGDGALSLHIVQPAGKPKMAIAD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRDLKVGDYFG 310
>gi|288553114|ref|YP_003425049.1| methionyl-tRNA formyltransferase [Bacillus pseudofirmus OF4]
gi|288544274|gb|ADC48157.1| methionyl-tRNA formyltransferase [Bacillus pseudofirmus OF4]
Length = 316
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 168/317 (52%), Gaps = 14/317 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +F+V L+ LV ++I + TQP RP G R V +A + +P
Sbjct: 1 MKIVFMGTPDFSVPVLRQLVMDGYNIAACITQPDRPVG-RKKVMTPPPVKVEAMKHGIPV 59
Query: 63 LVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++ +E + + + D+ V AYG ++P IL G N HASLLP++RG AP
Sbjct: 60 LQPERIRNQEEIERVLGYEPDLVVTAAYGQILPNDILEKPAYGCINVHASLLPKYRGGAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I ++I+ G+ ETGI IM M + LD G + +VPI + + +LS A + E
Sbjct: 120 IHQSIIDGEKETGITIMYMVEKLDAGDILTQVRVPILEEDHVGSMHDKLSAAGAKLLSET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L + + Q E +T+A I++ ++++ ++ E+++N +R L+P+P A+ +
Sbjct: 180 IPALIKGEITPQKQDETKVTFARNITREMEKMDWSKTGEDLYNQVRGLNPWPVAFTTL-- 237
Query: 242 GNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIG 295
+ + +K+ ++ V E + G VI + +F +A A+ IM LQ +G + +
Sbjct: 238 --QQKPLKVWRAKKVNVATEHESGTVIEIRDDSFVVATGNQTALEIMELQPSGKKRMTAE 295
Query: 296 DFLLGC--PVIIGCIVG 310
DFL G + G +G
Sbjct: 296 DFLRGAGSSLKTGMKLG 312
>gi|221069825|ref|ZP_03545930.1| methionyl-tRNA formyltransferase [Comamonas testosteroni KF-1]
gi|220714848|gb|EED70216.1| methionyl-tRNA formyltransferase [Comamonas testosteroni KF-1]
Length = 321
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 128/320 (40%), Positives = 184/320 (57%), Gaps = 17/320 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT EFA L++L+++ + V TQP RPAG RG+K SAV + A E +
Sbjct: 1 MKVIFAGTPEFARVALESLLAAGFEVPLVLTQPDRPAG-RGMKLQASAVKQCALEQGIAV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ + ADV VV AYGL++PQ +L+ +LG N HASLL
Sbjct: 60 AQPLSLRLDGKYPEDAAAAKAAIEAAQADVMVVAAYGLILPQWVLDTPRLGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RAI AGD ETG+ IM+MD LDTG + + ++PI+++ TA L +L+ L
Sbjct: 120 PRWRGAAPIHRAIEAGDAETGVTIMQMDAGLDTGDMCVIERLPIAAHDTTASLHDKLATL 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+VEA++ LP +PQ G+TYA KI K E+ +++ SA+ + +RA +PFP
Sbjct: 180 GGRLIVEALELAACGGLPRTPQPAAGVTYAHKIEKAESLIDWSESADVIARRLRAFNPFP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGR 290
G + E IK+ E++ EG G PG V++ +AC G + + LQRAGG+
Sbjct: 240 GGATSLGG----EAIKVWEARAEEGSGAPGMVLSADAQGVRVACGSGVLNMTLLQRAGGK 295
Query: 291 VLDIGDFLLGCPVIIGCIVG 310
L GDFL G + G ++G
Sbjct: 296 RLAAGDFLRGFELPAGALLG 315
>gi|94495735|ref|ZP_01302315.1| methionyl-tRNA formyltransferase [Sphingomonas sp. SKA58]
gi|94425123|gb|EAT10144.1| methionyl-tRNA formyltransferase [Sphingomonas sp. SKA58]
Length = 302
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 125/307 (40%), Positives = 171/307 (55%), Gaps = 9/307 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+++MGT EFAV L ALV++ H I +VY+QPPRPAG RG S VH++A+ L
Sbjct: 1 MRIIYMGTPEFAVPALDALVAAGHEIAAVYSQPPRPAG-RGKGLRASPVHQRAEALGLEV 59
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + F + ADVAVV AYGL++P IL A + G N HASLLPRWRGAAP
Sbjct: 60 RTPLSLKDGDTQAAFAALEADVAVVAAYGLILPPAILAAPRQGCMNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+AGDN TG+ IM M+ LDTGP+ PI A Q+ +
Sbjct: 120 IQRAILAGDNVTGVTIMDMEAGLDTGPMRAKHVTPIEDKTAGALTQELAQAGADLMVEVL 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
D P PQ + G+TYA KI K E+R++F + A + +RA +PFPGA+
Sbjct: 180 DDLSL---HPPVPQPDEGVTYAAKIDKAESRIDFTQDAHAIERQVRAFNPFPGAFFAYQG 236
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER ++L + + G PGE+++ + I C A+R +QRAG + G+ L G
Sbjct: 237 ----ERFRILAAHVEHHAGAPGELLDDSLLIGCGHDAIRPTLIQRAGKGAMSPGELLRGY 292
Query: 302 PVIIGCI 308
+ G
Sbjct: 293 DMPAGSR 299
>gi|119383394|ref|YP_914450.1| methionyl-tRNA formyltransferase [Paracoccus denitrificans PD1222]
gi|166215494|sp|A1AZR0|FMT_PARDP RecName: Full=Methionyl-tRNA formyltransferase
gi|119373161|gb|ABL68754.1| methionyl-tRNA formyltransferase [Paracoccus denitrificans PD1222]
Length = 297
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 144/308 (46%), Positives = 191/308 (62%), Gaps = 13/308 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT +F+V L+A +++ H +V+VY+QPPR AG RG K S VH+ A+E LP
Sbjct: 1 MRVIFMGTPDFSVPALRA-IAARHQVVAVYSQPPRAAG-RGQKPRPSPVHRAAEELGLPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + ++ F + ADVAVVVAYGL++PQ +L A LG N HASLLPRWRGAAP
Sbjct: 59 RTPERLKSPQDQGDFAALQADVAVVVAYGLILPQPVLEAPWLGCLNIHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD ETG+AIM+M+ LDTGPV + I + TA L L+ + A +VE
Sbjct: 119 IHRAIMAGDAETGVAIMQMEAGLDTGPVLAEARTTIGAEDTTADLHDRLAEMGAALIVET 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L P PQ G+TYA+KI K E R+++ R A V IR LSPFPGAW +
Sbjct: 179 LHRLPL---PAEPQPAEGVTYAQKIDKAEARIDWGRPAAQVDRQIRGLSPFPGAWCLIGG 235
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KLL S+L G G PG V++ FTIAC +GAV ++ QR G R + + L G
Sbjct: 236 ----ERVKLLRSRLAAGSGAPGRVLS-GFTIACGEGAVEVLEAQREGKRPMPAAEILRGM 290
Query: 302 PVIIGCIV 309
+ +
Sbjct: 291 ALP--DRL 296
>gi|256004590|ref|ZP_05429568.1| methionyl-tRNA formyltransferase [Clostridium thermocellum DSM
2360]
gi|255991462|gb|EEU01566.1| methionyl-tRNA formyltransferase [Clostridium thermocellum DSM
2360]
Length = 306
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 95/310 (30%), Positives = 157/310 (50%), Gaps = 12/310 (3%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP-T 66
MGT EFA+ +L+ LV + + +V TQP +P G RG K+ + V + A + ++ L P
Sbjct: 1 MGTPEFAIPSLEMLVREGYEVAAVVTQPDKPKG-RGKKTAMPPVKEFAIKNNIEVLQPSK 59
Query: 67 KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
E D+ V AYG ++PQ +L+ G N H SLLP++RGAAPI AI
Sbjct: 60 VKTPEFVSTIRELRPDLLVTAAYGKILPQEVLDIPPYGCVNVHGSLLPKYRGAAPINWAI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ G+ TGI M D +DTG + ++ IS ++ L +L+ L A + E + K+E
Sbjct: 120 INGEKVTGITTMYTDAGMDTGDMLLKAEIEISDDMTAGELHDKLACLGAEVLRETLKKIE 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ L PQ TYA + K +N+ +SA +VHN +R +P+P A+ +
Sbjct: 180 DSTLQRIPQPHEQATYAPMLDKTVGCINWSKSARDVHNLVRGTNPWPVAFTYYKG----Q 235
Query: 247 RIKLLESQLVE---GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
++K+ + +++ PG ++ +AC G V I +Q R + + +++ G
Sbjct: 236 KMKVWVTSVLDEENHNFTPGTILKVGKDGLVVACGVGKVVIKEVQFDSSRRMTVEEYICG 295
Query: 301 CPVIIGCIVG 310
V G ++G
Sbjct: 296 HKVGEGEVLG 305
>gi|319939672|ref|ZP_08014031.1| methionyl-tRNA formyltransferase [Streptococcus anginosus 1_2_62CV]
gi|319811261|gb|EFW07567.1| methionyl-tRNA formyltransferase [Streptococcus anginosus 1_2_62CV]
Length = 311
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 160/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT ++FMGT +F+ L+ L+ S + I++V TQP R G R + ++ V + A ++
Sbjct: 1 MT-NIIFMGTPDFSATVLKGLLESKQYEILAVVTQPDRAVG-RKKEIRMTPVKELALDYG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + L +V A L + N HASLLP++RG
Sbjct: 59 LPIYQPEKLSKSAELDSLMNLNADGIVTAAFGQFLPSKLLDSVNFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ GD E G+ IM+M K +D G + R +PI N + ++L+++ ++
Sbjct: 119 APIHYAIINGDKEAGVTIMEMVKEMDAGDMIARRAIPIEETDNVGTMFEKLALVGCDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E++ +L PQ +N +T++ IS E R+++ ++ + N IR + P+P A +
Sbjct: 179 ESLPSYLAGDLKSVPQDKNQVTFSPNISPEEERIDWTKTNRQLFNQIRGMYPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
ER K+ E+ VEG G+PGE++ +A + A+ + +Q AG + I D
Sbjct: 239 ----NGERFKIYEATPVEGAGQPGEILAIGKKELIVAAGESALSLKTVQPAGKSKMTIVD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGLGRQLSVGDFFG 310
>gi|19746553|ref|NP_607689.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes MGAS8232]
gi|94994843|ref|YP_602941.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes MGAS10750]
gi|23821553|sp|Q8P003|FMT_STRP8 RecName: Full=Methionyl-tRNA formyltransferase
gi|123257533|sp|Q1J5I9|FMT_STRPF RecName: Full=Methionyl-tRNA formyltransferase
gi|19748765|gb|AAL98188.1| putative methionyl tRNA formyltransferase [Streptococcus pyogenes
MGAS8232]
gi|94548351|gb|ABF38397.1| Methionyl-tRNA formyltransferase [Streptococcus pyogenes MGAS10750]
Length = 311
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 96/314 (30%), Positives = 161/314 (51%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +F+ L+ L+ + + I+ V TQP R G R ++ V + A E +
Sbjct: 2 IKLLFMGTPQFSATVLKGLLDNPAYEILGVVTQPDRAVG-RKKDIKVTPVKQLALEHGIS 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL + + ++ A +L + N HASLLP++RG AP
Sbjct: 61 IYQPEKLSGSQELIEIMGLGADGIITAAFGQFLPTLLLDSVSFAINVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM GD E G+ IM+M K +D G + PI N L ++L+++ ++++
Sbjct: 121 IHYAIMNGDKEAGVTIMEMIKEMDAGDMVAKASTPILETDNVGTLFEKLAIIGRDLLLDS 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L PQ + T++ IS + ++++ S + V +HIR ++P+P A +
Sbjct: 181 LPAYLSGELKPIPQDHSQATFSPNISPEQEKLDWTMSNQEVFSHIRGMNPWPVAHTFLEG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R+K+ E+QL EGEG PG+VI + IA QGA+ ++ +Q AG + I DFL
Sbjct: 241 ----QRLKIYEAQLAEGEGLPGQVIVKTKKSLVIATGQGALSLIVVQPAGKPKMSIIDFL 296
Query: 299 L--GCPVIIGCIVG 310
G + +G I+G
Sbjct: 297 NGIGRKLEVGDIIG 310
>gi|55821414|ref|YP_139856.1| methionyl-tRNA formyltransferase [Streptococcus thermophilus LMG
18311]
gi|55823339|ref|YP_141780.1| methionyl-tRNA formyltransferase [Streptococcus thermophilus
CNRZ1066]
gi|73919419|sp|Q5LYX4|FMT_STRT1 RecName: Full=Methionyl-tRNA formyltransferase
gi|73919420|sp|Q5M3I7|FMT_STRT2 RecName: Full=Methionyl-tRNA formyltransferase
gi|55737399|gb|AAV61041.1| methionyl tRNA formyltransferase [Streptococcus thermophilus LMG
18311]
gi|55739324|gb|AAV62965.1| methionyl-tRNA formyltransferase [Streptococcus thermophilus
CNRZ1066]
Length = 311
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 98/316 (31%), Positives = 156/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT F+ L+ L+ + IV+V TQP R G R + ++ V + A
Sbjct: 1 MT-KIIFMGTPAFSATVLEGLLTDERYDIVAVVTQPDRAVG-RKKEIRMTPVKELALAHE 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL E L +V A L + N HASLLP++RG
Sbjct: 59 LPIYQPEKLSGSEEMAQLISLGADGIVTAAYGQFLPSKLLDSMDFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ GD E G+ IM+M K +D G + + +PI N + ++L+VL ++
Sbjct: 119 APIHYAIINGDAEAGVTIMEMVKEMDAGDMVSQKALPILDQDNVGTMFEKLAVLGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + PQ + +T++ IS E R+++ +S ++ N IR + P+P A +
Sbjct: 179 ETLPAYIAGEIKPVPQDASQVTFSPNISPEEERLDWNKSGRDIFNQIRGMYPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E LVEG+G+ G +I + +A QGA+ + +Q G + I D
Sbjct: 239 ----NGKRFKIYEGDLVEGQGQAGHIIEKTKKSLVVATGQGAISLKSVQPEGKPRMAIAD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G + G
Sbjct: 295 FLNGVGRNLEVGDVFG 310
>gi|158522243|ref|YP_001530113.1| methionyl-tRNA formyltransferase [Desulfococcus oleovorans Hxd3]
gi|158511069|gb|ABW68036.1| methionyl-tRNA formyltransferase [Desulfococcus oleovorans Hxd3]
Length = 313
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 163/313 (52%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT ++AV L+AL + + + V TQP +P G RG K V A+ L
Sbjct: 5 LRIVFMGTPDYAVPCLKALADNGYDVPLVVTQPDKPKG-RGRKMAPPPVKVAAEALGLAV 63
Query: 63 LVPTKLGQEEYEQFLSFN-ADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + +++ + L D+ VVVAYG ++P+ +L LG N H SLLPR+RG +P
Sbjct: 64 AQPASVRTDDFIRTLKNIAPDLLVVVAYGKILPRAVLELPALGAVNIHPSLLPRYRGPSP 123
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ AI + ETG+ + MD+ +D+G + + PIS A L L+VL A +++
Sbjct: 124 IQWAIAGMEAETGVTSIFMDEGMDSGDMILSARAPISDEDTAADLHDRLAVLGADVLIDT 183
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++E PQ +T+A + K R+++ + + + I A++P+PGA+ E
Sbjct: 184 LARIESGTATPVPQDPEAVTFAPLLKKTHGRIDWNQPSARLRRFINAMTPWPGAFTETGT 243
Query: 242 GNKHERIKLLESQLV--EGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+L ++ V E + PG V+ +A + G + + R+Q G+ +D+ D
Sbjct: 244 R----RYKILAARPVTLEKKASPGTVVTRFPDELVVATADGGLVVTRIQGEAGKPMDVAD 299
Query: 297 FLLGCPVIIGCIV 309
FL G + G
Sbjct: 300 FLRGHAIAEGTRF 312
>gi|229520216|ref|ZP_04409643.1| methionyl-tRNA formyltransferase [Vibrio cholerae TM 11079-80]
gi|229342810|gb|EEO07801.1| methionyl-tRNA formyltransferase [Vibrio cholerae TM 11079-80]
Length = 315
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 118/314 (37%), Positives = 176/314 (56%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAG-RGKKLTASPVKTLALEHNVP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ IM+MD LDTG + + +PI ++ +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q Q + YA K+SK E R+N+ +A ++ IRA +P+P + E+
Sbjct: 183 CLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E+Q V PG ++ +A QG + + LQ G + L + D
Sbjct: 243 ENSIKVWQARVETQAV--SQAPGTIVQADKSGIYVATGQGVLVLESLQIPGKKALPVQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNARADWFSVGSQL 314
>gi|117619312|ref|YP_854785.1| methionyl-tRNA formyltransferase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|171855189|sp|A0KEW9|FMT_AERHH RecName: Full=Methionyl-tRNA formyltransferase
gi|117560719|gb|ABK37667.1| methionyl-tRNA formyltransferase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 314
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 113/316 (35%), Positives = 176/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+++F GT +FA L AL+SS H +V+VYTQP +PAG RG K S V + A +LP
Sbjct: 3 KLKLIFAGTPDFAARHLAALLSSDHEVVAVYTQPDKPAG-RGQKLTASPVKELALAHNLP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E + + AD+ VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 62 VYQPASLRKEEAQAELAALGADLMVVVAYGLILPKAVLDTPRLGCINVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + PI+++ +A L +L+ L A+V+
Sbjct: 122 PIQRSIWAGDAETGVTIMQMDVGLDTGAMIRKVSCPIAADETSASLYDKLAGLGPQALVD 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ + N Q + YAEK+SK E R+++ A + RA +P+P +W E+
Sbjct: 182 TVNAMAAGNTAAEAQDDAQANYAEKLSKEEARIDWSMEAVAIERCTRAFNPWPISWFEVA 241
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVINP---NFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++++V + G ++ IA +G +R++ LQ G + + +
Sbjct: 242 G----QTVKVWQAEVVAQDHGQAAGTLLKADKQGIDIATGKGVLRLLTLQPPGKKAMSVT 297
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 298 DLLNSRRDWFEPGTQL 313
>gi|260062639|ref|YP_003195719.1| methionyl-tRNA formyltransferase [Robiginitalea biformata HTCC2501]
gi|88784206|gb|EAR15376.1| methionyl-tRNA formyltransferase [Robiginitalea biformata HTCC2501]
Length = 315
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 100/315 (31%), Positives = 154/315 (48%), Gaps = 7/315 (2%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L + FMGT EFAVA+L AL+ + I V T P RPAG RG K SAV A E
Sbjct: 1 MKDLNIAFMGTPEFAVASLDALIRADFKIAVVITAPDRPAG-RGRKLRASAVKSYAVEKG 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP L PT L ++ + L+ VV ++P+++ + G +N HASLLP +RGA
Sbjct: 60 LPVLQPTNLKDPDFVEQLASFGVNLQVVVAFRMLPRQVWEFPEHGTFNLHASLLPDYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ G+ TG +D+ +DTG V + I N L L L A +V
Sbjct: 120 APINWAVINGERTTGATTFFIDEQIDTGHVILQESLEIGPRENAGQLHDRLMALGAGLVV 179
Query: 180 EAMDKLEQNNLPLSPQI-ENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
E + +++ + PQ A K+ + + R+++ A + N IR LSP+P AW +
Sbjct: 180 ETVRQIQAGTVTTHPQPEPEPDKIAPKLFRDDCRIDWKAPAAQIDNLIRGLSPYPTAWTQ 239
Query: 239 MMIGNKHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ G+ K+ ++ + G PG++ + + S + I+ LQ G R + +
Sbjct: 240 LETGSGTTTCKIYAARPADTPSNGSPGDLHGMDRKLFVDTSDSQLEILELQPEGKRRMPV 299
Query: 295 GDFLLGCPVIIGCIV 309
D+L G +
Sbjct: 300 SDWLNGTELKKNDRF 314
>gi|56459129|ref|YP_154410.1| methionyl-tRNA formyltransferase [Idiomarina loihiensis L2TR]
gi|73919397|sp|Q5QXI6|FMT_IDILO RecName: Full=Methionyl-tRNA formyltransferase
gi|56178139|gb|AAV80861.1| Methionyl-tRNA formyltransferase [Idiomarina loihiensis L2TR]
Length = 316
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 118/306 (38%), Positives = 169/306 (55%), Gaps = 8/306 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT +FA LQ L+ SH +V VYTQP RPAG RG K SAV K A E LP
Sbjct: 1 MRIVFAGTPDFAAQHLQQLLDESHQVVGVYTQPDRPAG-RGKKPQPSAVKKLALEHQLPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L EE + L+ DV VVVAYGL++PQ +L+ G N H SLLPRWRGAAP
Sbjct: 60 YQPESLKSEEDQAALADLKPDVMVVVAYGLLLPQAVLDIPTKGCLNVHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD E+G+ IM+M+ LDTGPV + IS + +A L +L L A+ +
Sbjct: 120 IQRAIWAGDLESGVCIMQMEAGLDTGPVLHEERCAISPDETSASLYHKLESLGPEALTKV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM-M 240
+ L+ PQ + TYA+K++K E ++++ + A + +RA +P+P +W +
Sbjct: 180 LKDLDGYQSQAKPQSDANATYAKKLTKQEGKIDWTQPAAFIERCVRAFNPWPMSWCQSEH 239
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++L++G PG +IN + G +RI + Q G +
Sbjct: 240 LKAGQNTVKIHAAELIQGASNKGPGTIINSTHEGIDVVTGDGILRITQAQMPGKKAQPAS 299
Query: 296 DFLLGC 301
+ G
Sbjct: 300 TLVNGY 305
>gi|300914476|ref|ZP_07131792.1| methionyl-tRNA formyltransferase [Thermoanaerobacter sp. X561]
gi|307724288|ref|YP_003904039.1| methionyl-tRNA formyltransferase [Thermoanaerobacter sp. X513]
gi|300889411|gb|EFK84557.1| methionyl-tRNA formyltransferase [Thermoanaerobacter sp. X561]
gi|307581349|gb|ADN54748.1| methionyl-tRNA formyltransferase [Thermoanaerobacter sp. X513]
Length = 309
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 106/313 (33%), Positives = 171/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT EFAV +LQ L + + +V TQP + G RG+K S V + A + +
Sbjct: 1 MKIVFMGTPEFAVPSLQKLFEEGYDVAAVVTQPDKQKG-RGMKFSFSPVKEVALQKGVEI 59
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K+ N D VVVAYG ++P+ IL K G N HASLLP++RGAA
Sbjct: 60 LQPEKIKNNPEFLNRLEEINPDAIVVVAYGKILPEEILTLPKYGCINVHASLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ ETGI M MDK LDTG + + +PI + L +LS L A ++E
Sbjct: 120 PINWAIINGEKETGITTMLMDKGLDTGDMLIKKSIPILEEDDAETLHDKLSRLGAEVLIE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ LE+ +L Q E +Y+ ++K +++ ++AE + N IR + P+PG +
Sbjct: 180 TLKGLEKGSLTPVKQREEEASYSPILTKEMGHIDWNKTAEEIRNLIRGMKPWPGCYTFYG 239
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ + ++VE G + G V+ + + C + A++I+ +Q+ G + + I +
Sbjct: 240 D----KMLKIWKGEIVEYNGNEENGTVLKSKGDLIVKCDKDALKIVEIQQEGSKKMGIRE 295
Query: 297 FLLGCPVIIGCIV 309
+L+G + G I
Sbjct: 296 YLIGHNIPEGTIF 308
>gi|153834315|ref|ZP_01986982.1| methionyl-tRNA formyltransferase [Vibrio harveyi HY01]
gi|148869323|gb|EDL68337.1| methionyl-tRNA formyltransferase [Vibrio harveyi HY01]
Length = 315
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 111/316 (35%), Positives = 175/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E +P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKTIALEHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++PQ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDEAKQELADLNADIMVVVAYGLLLPQVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI ++ +A + ++L+ L A+++
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEASDTSASMYEKLAGLGPDALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + YA+K+SK E R+++ A ++ +RA +P+P + E
Sbjct: 183 CLADIAAGKAEPVKQDDELANYAKKLSKEEARIDWNDDAAHIERCVRAFNPWPMSHFEAA 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S++ E + G ++ + G + + +LQ G + + +
Sbjct: 243 ENS----IKVWQSRVEEQTSDKPAGTIVQADKTGIYVVTGNGVLVLEQLQVPGKKAMSVQ 298
Query: 296 DFLLGCP--VIIGCIV 309
D L +G +
Sbjct: 299 DILNSRASWFEVGTQL 314
>gi|94499927|ref|ZP_01306463.1| methionyl-tRNA formyltransferase [Oceanobacter sp. RED65]
gi|94428128|gb|EAT13102.1| methionyl-tRNA formyltransferase [Oceanobacter sp. RED65]
Length = 313
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 115/306 (37%), Positives = 173/306 (56%), Gaps = 11/306 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVF GT +FA + LQAL+++ +V+VYTQP RPAG RG K S V + A E +P
Sbjct: 1 MKVVFAGTPDFAASHLQALLNNHVDVVAVYTQPDRPAG-RGKKLTPSPVKRLALENQIPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P Q+E LS D+ VVVAYGL++PQ +L+ K G N HASLLPRWRGAAP
Sbjct: 60 YQPENFKQQEDRDALSALQPDLMVVVAYGLLLPQAVLDIPKHGCINSHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD+ +G+ +M+M+ LDTGP+ + PI + L L + + A+V+
Sbjct: 120 IQRAIEAGDSVSGVTVMQMEAGLDTGPMIKKVETPIMPSDTGGSLHDRLMEMGSQAVVDV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + Q ++ YA+K++K E V++ SAE V IRA +PFP + +
Sbjct: 180 VAQFANGQVVAEVQDDSLSCYAKKLTKDEALVDWRSSAEEVARKIRAFNPFPCCYTLLGD 239
Query: 242 GNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
RI+LL++Q+ PG ++ +AC + AV + ++Q + +++ D
Sbjct: 240 H----RIRLLQAQIFPQNHNALPGTIMSINKQGIMVACGEFAVVLEKIQLPSKKPMNVAD 295
Query: 297 FLLGCP 302
L G
Sbjct: 296 VLNGKH 301
>gi|153830119|ref|ZP_01982786.1| methionyl-tRNA formyltransferase [Vibrio cholerae 623-39]
gi|148874383|gb|EDL72518.1| methionyl-tRNA formyltransferase [Vibrio cholerae 623-39]
Length = 315
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 119/314 (37%), Positives = 176/314 (56%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAG-RGKKLTASPVKTLALEHNVP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGDNETG+ IM+MD LDTG + + +PI ++ +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDNETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q Q + YA K+SK E R+N+ +A ++ IRA +P+P + E+
Sbjct: 183 CLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E+Q V PG ++ +A QG + + LQ G + L + D
Sbjct: 243 ENSIKVWQARVETQAV--TQAPGTIVQADKSGIYVATGQGVLVLESLQIPGKKALPVQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNARADWFSVGSQL 314
>gi|310815111|ref|YP_003963075.1| methionyl-tRNA formyltransferase [Ketogulonicigenium vulgare Y25]
gi|308753846|gb|ADO41775.1| methionyl-tRNA formyltransferase [Ketogulonicigenium vulgare Y25]
Length = 298
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 143/304 (47%), Positives = 189/304 (62%), Gaps = 9/304 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT +F+V L+ALV++ H I VY QPPRPAG RG K + VH +A+ L
Sbjct: 1 MRVVFMGTPDFSVGVLEALVAAGHEIACVYCQPPRPAG-RGKKDRPTPVHARAESLGLMV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G +E +F + NADVAVVVAYGL++PQ +L+A K G N HASLLPRWRGAAP
Sbjct: 60 RHPKSLRGADEQAEFAALNADVAVVVAYGLILPQVVLDAPKHGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD ETG+ IM+M+ LDTGPV PI + + L Q LS + A +++
Sbjct: 120 IQRAIMAGDAETGVCIMQMEAGLDTGPVLLRAATPIGATDTSGDLHQRLSQMGARMIIDT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+++L + Q E+G+TYA KI K E V++ R A V I LSPFPGAW +
Sbjct: 180 LERLGGLIPQV--QPEDGVTYAAKIDKAEALVDWTRPAPTVARQINGLSPFPGAWCMIGD 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KLL ++ V G G V+ FT+AC GA+R++ +QR G R + + D LLG
Sbjct: 238 ----ERVKLLRAEAVPGTAAAGTVL-DGFTVACGSGALRVLDIQREGKRAMPVADALLGL 292
Query: 302 PVII 305
+
Sbjct: 293 TLPA 296
>gi|300854443|ref|YP_003779427.1| methionyl-tRNA formyltransferase [Clostridium ljungdahlii DSM
13528]
gi|300434558|gb|ADK14325.1| methionyl-tRNA formyltransferase [Clostridium ljungdahlii DSM
13528]
Length = 310
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 94/314 (29%), Positives = 164/314 (52%), Gaps = 13/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT EF+V +L+ L+ ++ +V+TQP +P G RG K S V ++A + +P
Sbjct: 1 MNIVFMGTPEFSVPSLKRLIE-EFNVEAVFTQPDKPKG-RGKKLCFSEVKEEALKHDIPI 58
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + D VVVAYG ++ +++L+ K G N HASLLP++RGAA
Sbjct: 59 YQPLKLKNDAEAISALTKIRPDFIVVVAYGQILTKQVLDIPKYGCINLHASLLPKYRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI I+ G++E+G M MD LDTG + V I+ + L L A +V+
Sbjct: 119 PINWCIINGESESGNTTMFMDTGLDTGDMLLSSNVKITDIMTAGELHDVLMEDGAELLVK 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ LE+ ++ Q E YA ++K ++N+ + +++ N +R L+P+P A+ +
Sbjct: 179 TLKGLEKGDIVRKKQGETTTEYAGMLNKSMAKINWNLNCKDIKNFVRGLNPWPIAYTQYK 238
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
N K+ E + ++ +PG +I +AC G V I ++Q G + +++
Sbjct: 239 NDNM----KIYEVECLDESCGEEPGCIIDVSKNGIKVACGNGTVLIKKIQFPGRKPMNVS 294
Query: 296 DFLLGCPVIIGCIV 309
+++ G + ++
Sbjct: 295 EYIKGHSIEKNIVL 308
>gi|121596337|ref|YP_988233.1| methionyl-tRNA formyltransferase [Acidovorax sp. JS42]
gi|166214868|sp|A1WD32|FMT_ACISJ RecName: Full=Methionyl-tRNA formyltransferase
gi|120608417|gb|ABM44157.1| methionyl-tRNA formyltransferase [Acidovorax sp. JS42]
Length = 323
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 122/321 (38%), Positives = 173/321 (53%), Gaps = 14/321 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT EFA L+ L+++ ++ V TQP RPAG RG+K S V + A + +
Sbjct: 1 MRVIFAGTPEFARVALERLLAAGFTVPLVLTQPDRPAG-RGMKLQASPVKQCALQHGIAV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ + ADV VV AYGL++PQ +LN +LG N HASLL
Sbjct: 60 AQPLSLRLDGKYPEDAAAAKAAIEAAQADVMVVAAYGLILPQWVLNTPRLGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RAI AGD ETG+ IM+MD LDTG + + K IS TA L L+ L
Sbjct: 120 PRWRGAAPIHRAIEAGDAETGVTIMQMDAGLDTGDMLLLEKTAISPADTTATLHDRLAQL 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+VEA++ L +PQ G+TYA KI K E+ +++ + AE + +RA PFP
Sbjct: 180 GGRLIVEALEMAACGGLKPTPQPAEGVTYAHKIDKAESTIDWNQPAEVIARRVRAFDPFP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGA-VRIMRLQRAGG 289
GA + ++S + G++++ +AC G+ +R+ LQRAGG
Sbjct: 240 GAATTLGADAIKVWSCEIDSCSRTLDAACGQILSIDADGIGVACGAGSLLRLTVLQRAGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIVG 310
+ L DFL G P+ G ++G
Sbjct: 300 KRLPAADFLRGFPLAPGMVLG 320
>gi|225024415|ref|ZP_03713607.1| hypothetical protein EIKCOROL_01290 [Eikenella corrodens ATCC
23834]
gi|224942796|gb|EEG24005.1| hypothetical protein EIKCOROL_01290 [Eikenella corrodens ATCC
23834]
Length = 311
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 125/314 (39%), Positives = 172/314 (54%), Gaps = 11/314 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M +V+F GT +FAV L+A+ + I V TQP RP G RG+K S V K A E
Sbjct: 1 MIRKVIFAGTPDFAVDALRAIAEAGFDIPLVLTQPDRPKG-RGMKLQASPVKKTALELGF 59
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L E ++ + AD+ VV AYGL++PQ +L+ + G N HASLLPRWRGA
Sbjct: 60 QVAQPESLKSESAQEMLRAVEADIMVVAAYGLLLPQAVLDIPRHGCLNIHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD+ETGI IM+MD LDTG V PI + N L +L+ + AHA+V
Sbjct: 120 APIQRAIEAGDSETGICIMQMDAGLDTGAVISRHPCPILPSDNAQTLHDKLAEIGAHAIV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + PQ E+GITYA K+SK + ++++ + AE + IRA +P PG W +
Sbjct: 180 ADLQH--HSQRNAQPQPEHGITYAHKLSKADAQIDWTQPAEAIERRIRAFNPVPGVWCDY 237
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +Q+ G G V+ +AC G++ I LQ AG ++
Sbjct: 238 ----HGKPLKIWAAQVSSAGGVAGSVLQADKNGIQVACGSGSLLIQILQPAGSARMEAAA 293
Query: 297 FLLGCPVIIGCIVG 310
FL G PV G G
Sbjct: 294 FLAGHPVAAGSRFG 307
>gi|254459959|ref|ZP_05073375.1| methionyl-tRNA formyltransferase [Rhodobacterales bacterium
HTCC2083]
gi|206676548|gb|EDZ41035.1| methionyl-tRNA formyltransferase [Rhodobacteraceae bacterium
HTCC2083]
Length = 304
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 146/309 (47%), Positives = 187/309 (60%), Gaps = 8/309 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT +F+V L AL + H + +VY QPPRPAG RG K + VH +A E L
Sbjct: 1 MRLIFMGTPDFSVPVLDALCEAGHEVAAVYCQPPRPAG-RGKKERPTPVHARALELGLDV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G +E F NAD+AVVVAYGL++PQ IL+A G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKGVDEQASFAELNADIAVVVAYGLILPQVILDAPAKGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD ETG+ IM+M+ LDTGPV + I + T L LS L A A+ EA
Sbjct: 120 IHRAIMAGDAETGVCIMQMEAGLDTGPVLLRDVLAIGAEETTGTLHDRLSALGARAICEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+++LE + + Q E +TYA KI K E ++++ R A + IR LSPFPGAW +
Sbjct: 180 LERLEDLSPTV--QPEQNVTYASKIDKAEAKIDWSRCAIEIDRQIRGLSPFPGAWTILDG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
R+KLL S+L EGEG G+ ++ TI C GAV+I R Q+AG D +FL G
Sbjct: 238 A----RLKLLTSRLGEGEGPRGQTLDHALTIGCGSGAVQITRAQKAGKGAQDAQEFLHGT 293
Query: 302 PVIIGCIVG 310
PV G G
Sbjct: 294 PVPKGTQFG 302
>gi|170749552|ref|YP_001755812.1| methionyl-tRNA formyltransferase [Methylobacterium radiotolerans
JCM 2831]
gi|170656074|gb|ACB25129.1| methionyl-tRNA formyltransferase [Methylobacterium radiotolerans
JCM 2831]
Length = 313
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 141/314 (44%), Positives = 188/314 (59%), Gaps = 7/314 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT +FAV TL L H I +VYT+ P AG RG+ S VH A +P
Sbjct: 1 MRVVFMGTPDFAVPTLARLAQDGHDIAAVYTRAPARAG-RGMSLRPSPVHALADSLGIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P E E F + ADVAVVVAYG+++PQ IL+A K G N H SLLPRWRGAAP
Sbjct: 60 LTPATLRTPEAAETFAAHRADVAVVVAYGMLLPQAILDAPKHGCLNLHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+MAGD E+G+ +M+M+ LDTGPVA ++PI+ + L L L A M A
Sbjct: 120 IQRAVMAGDAESGVGVMRMEAGLDTGPVALEARLPIAPGMTAGALHDALMPLGADLMARA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L+ L +PQ E+G+ YA KI+ E R+++ R A V N I LSPFPGA+ E+ +
Sbjct: 180 LAALDAGTLTFTPQPEDGVVYAHKITNDEARIDWSRPAAEVANRINGLSPFPGAFFEVDL 239
Query: 242 GNKHERIKLLESQLVE----GEGKPGEVINPNFTIACSQGAVRIMRLQRAGG-RVLDIGD 296
G ER+K+L + L E G G PG +++ T+AC GAVR++ L+RAG +
Sbjct: 240 GKGPERVKVLRAALAESAGSGAGAPGTLLDAEGTVACGDGAVRLVELRRAGKGGSASGAE 299
Query: 297 FLLGCPVIIGCIVG 310
F+ G + G +G
Sbjct: 300 FVRGARLAPGARLG 313
>gi|312278742|gb|ADQ63399.1| Methionyl-tRNA formyltransferase Fmt [Streptococcus thermophilus
ND03]
Length = 311
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 98/316 (31%), Positives = 156/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT F+ L+ L+ + IV+V TQP R G R + ++ V + A
Sbjct: 1 MT-KIIFMGTPAFSATVLEGLLTDEHYDIVAVVTQPDRAVG-RKKEIRMTPVKELALAHE 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL E L +V A L + N HASLLP++RG
Sbjct: 59 LPIYQPEKLSGSEEMAQLISLGADGIVTAAYGQFLPSKLLDSMDFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ GD E G+ IM+M K +D G + + +PI N + ++L+VL ++
Sbjct: 119 APIHYAIINGDAEAGVTIMEMVKEMDAGDMVSQKALPILDQDNVGTMFEKLAVLGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + PQ + +T++ IS E R+++ +S ++ N IR + P+P A +
Sbjct: 179 ETLPAYIAGEIKPVPQDASQVTFSPNISPEEERLDWNKSGRDIFNQIRGMYPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E LVEG+G+ G +I + +A QGA+ + +Q G + I D
Sbjct: 239 ----NGKRFKIYEGDLVEGQGQAGHIIEKTKKSLVVATGQGAISLKSVQLEGKPRMAIAD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G + G
Sbjct: 295 FLNGVGRNLEVGDVFG 310
>gi|152998581|ref|YP_001364262.1| methionyl-tRNA formyltransferase [Shewanella baltica OS185]
gi|166215510|sp|A6WHB0|FMT_SHEB8 RecName: Full=Methionyl-tRNA formyltransferase
gi|151363199|gb|ABS06199.1| methionyl-tRNA formyltransferase [Shewanella baltica OS185]
Length = 318
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 180/304 (59%), Gaps = 11/304 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL++S H+++ VYTQP RPAG RG K S V + A ++P
Sbjct: 3 PLNIIFAGTPDFAARHLQALLNSHHNVIGVYTQPDRPAG-RGKKLTASPVKELAVGNNIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E +Q L+ D+ VVVAYGL++P+ +LN +LG N H S+LPRWRGAA
Sbjct: 62 VYQPGSLRKEPAQQELAALNADIMVVVAYGLILPKVVLNTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ +M+MD LDTG + +PI + +A L ++L+ A+++
Sbjct: 122 PIQRALWAGDKETGVTVMQMDVGLDTGDMLLKTTLPIEDSDTSASLYEKLAEQGPVALLQ 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ L L Q E YAEK+SK E R+++ +SA+ + +RA +P+P ++ E
Sbjct: 182 ALEGLANGTLAAEKQDEALANYAEKLSKEEARLDWNKSAQQLWQEVRAFNPWPVSYFE-- 239
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++ IK+ ++Q+ E PG +I +A + G + ++ +Q G + L++
Sbjct: 240 --HQGNTIKVWQTQVSETTSTAAPGTIISASKKGIEVATADGVLTLLNMQLPGKKPLNVA 297
Query: 296 DFLL 299
D L
Sbjct: 298 DILN 301
>gi|163815236|ref|ZP_02206613.1| hypothetical protein COPEUT_01396 [Coprococcus eutactus ATCC 27759]
gi|158449431|gb|EDP26426.1| hypothetical protein COPEUT_01396 [Coprococcus eutactus ATCC 27759]
Length = 308
Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 105/313 (33%), Positives = 168/313 (53%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+++MGT +FAV L +LV + H +V+ YTQP +P G R + V KA E+ +P
Sbjct: 1 MRIIYMGTPDFAVNALVSLVDAGHEVVACYTQPDKPKG-RSKALQPTPVKVKAFEYGIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K E E+ + D VV AYG ++P+ ILN G N HASLLP++RGAAP
Sbjct: 60 YQPVKLREAENVEKIKQYAPDAIVVAAYGQILPESILNIPAYGCINIHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I+RAI+ G+++TG+ M M K LDTG + V I S+ L +L+ A ++
Sbjct: 120 IERAIIDGESKTGVTTMYMAKGLDTGDIIEQSVVSIMSDDTGETLTDKLAKTGAKLILST 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+DKLE + Q ++ YA +SK ++F + A+ + +R L P+P A+ +
Sbjct: 180 LDKLENGTAERTVQNDDESCYAAMLSKDMGDIDFTKPADEIERLVRGLQPWPCAFTRIKG 239
Query: 242 GNKHERIKLLESQLVEGEG--KPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ + + + +PG++ +F I C +GA++I RLQ G + +D
Sbjct: 240 ----KSVKIYGACVTDAPEGTEPGQITGVTKKSFAIVCGEGALQIKRLQPEGKKPMDAAA 295
Query: 297 FLLGCPVIIGCIV 309
FL G + G +
Sbjct: 296 FLAGNKLCDGERI 308
>gi|262191294|ref|ZP_06049488.1| methionyl-tRNA formyltransferase [Vibrio cholerae CT 5369-93]
gi|262032832|gb|EEY51376.1| methionyl-tRNA formyltransferase [Vibrio cholerae CT 5369-93]
Length = 315
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 118/314 (37%), Positives = 176/314 (56%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAG-RGKKLTASPVKTLALEHNVP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ IM+MD LDTG + + +PI ++ +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q Q + YA K+SK E R+N+ +A ++ IRA +P+P + E+
Sbjct: 183 CLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E+Q V PG ++ +A QG + + LQ G + L + D
Sbjct: 243 ENSIKVWQARVETQAV--TQAPGTIVQADKSGIYVATGQGVLVLESLQIPGKKALPVQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNARADWFSVGSQL 314
>gi|153212950|ref|ZP_01948544.1| methionyl-tRNA formyltransferase [Vibrio cholerae 1587]
gi|153826421|ref|ZP_01979088.1| methionyl-tRNA formyltransferase [Vibrio cholerae MZO-2]
gi|297581921|ref|ZP_06943841.1| methionyl-tRNA formyltransferase [Vibrio cholerae RC385]
gi|124116176|gb|EAY34996.1| methionyl-tRNA formyltransferase [Vibrio cholerae 1587]
gi|149739807|gb|EDM54002.1| methionyl-tRNA formyltransferase [Vibrio cholerae MZO-2]
gi|297533788|gb|EFH72629.1| methionyl-tRNA formyltransferase [Vibrio cholerae RC385]
Length = 315
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 118/314 (37%), Positives = 176/314 (56%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAG-RGKKLTASPVKTLALEHNVP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ IM+MD LDTG + + +PI ++ +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q Q + YA K+SK E R+N+ +A ++ IRA +P+P + E+
Sbjct: 183 CLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E+Q V PG ++ +A QG + + LQ G + L + D
Sbjct: 243 ENSIKVWQARVETQAV--TQAPGTIVQADKSGIYVATGQGVLVLESLQIPGKKALPVQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNARADWFSVGSQL 314
>gi|206890922|ref|YP_002248175.1| methionyl-tRNA formyltransferase [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|229487570|sp|B5YIL6|FMT_THEYD RecName: Full=Methionyl-tRNA formyltransferase
gi|206742860|gb|ACI21917.1| methionyl-tRNA formyltransferase [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 308
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 101/310 (32%), Positives = 171/310 (55%), Gaps = 9/310 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ ++F GT EFAV +L+AL+S I+ V TQP +P G RG + K A + L
Sbjct: 1 MSSGIIFFGTPEFAVPSLKALISRGEKILLVVTQPDKPKG-RGKNLQAPEIKKVALQCGL 59
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K+ + + + L N + A+VVAYG ++P+ IL K G N HASLLP++RGA
Sbjct: 60 PLCQPEKMKDDNFIKKLKSLNPEFAIVVAYGKILPKEILEIPKHGCINLHASLLPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ A++ G+ TG+ M +D+ LDTGP+ +++ I+ N L ++LSV+ A ++
Sbjct: 120 APIQWALINGEKITGVTTMIIDEGLDTGPILLQKEISINDEDNAETLSEKLSVVGAELII 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E +DK+ + + PQ + ++N+ SA + N +R P+P A+ +
Sbjct: 180 ETIDKMRKGIITPKPQTGEITYAPQLKKDDG-KINWNNSARKIFNLVRGTYPWPCAYSFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
ER+K+++++++EG PG +I + +G +RI+ +Q G +++ +F
Sbjct: 239 KD----ERVKIIKTEVLEGNAAPGLIIKAKNELIVGTQEGLLRILLIQPEGKKIMTAKEF 294
Query: 298 LLGCPVIIGC 307
+ G + G
Sbjct: 295 ISGRKINEGM 304
>gi|331007624|ref|ZP_08330766.1| Methionyl-tRNA formyltransferase [gamma proteobacterium IMCC1989]
gi|330418564|gb|EGG93088.1| Methionyl-tRNA formyltransferase [gamma proteobacterium IMCC1989]
Length = 340
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 122/331 (36%), Positives = 174/331 (52%), Gaps = 25/331 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT FA LQAL+ S H +V+VYTQP RP+G RG K S V A E LP
Sbjct: 1 MKIIFAGTPHFAAYHLQALLDSQHDVVAVYTQPDRPSG-RGKKLTPSPVKTLALEHQLPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E+ + +++ADV VVVAYGL++PQ +L+ + G N H SLLPRWRGAAP
Sbjct: 60 EQPLSLKAEDAQATLAAYSADVMVVVAYGLLLPQVVLDTPRYGCLNVHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+ GD ETGI IM+MDK LDTG + + +S +A L +L L A A+ +
Sbjct: 120 IQRAVEMGDKETGITIMQMDKGLDTGDMLYKVVCEVSDTDTSATLHDKLMALGAPALTQV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM-- 239
++++ L PQ YAEKI+K E +++ SAE + IRA +PFP A+ +
Sbjct: 180 LEQVSLQCLQPEPQDNATACYAEKITKEEAAIDWQDSAEKIARKIRAFTPFPIAYGFLGD 239
Query: 240 ---------------MIGNKHERIKLLESQLVEGEG-KPGEVI---NPNFTIACSQGAVR 280
+ + + E+ + GE+I + +ACS G++
Sbjct: 240 DRIKIYDVNIKRAIKRTTKRAIKKTIEETSPEKNTLFTAGEIISVGDKGIEVACSNGSIF 299
Query: 281 IMRLQRAGGRVLDIGDFLLGC--PVIIGCIV 309
I LQ + + I D L G I+G
Sbjct: 300 IRTLQIPNKKAMPIADILNGYTDRFIVGQQF 330
>gi|327441111|dbj|BAK17476.1| methionyl-tRNA formyltransferase [Solibacillus silvestris StLB046]
Length = 313
Score = 181 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 103/318 (32%), Positives = 163/318 (51%), Gaps = 15/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+ L+ L + I +V TQP RP G R V ++A L
Sbjct: 1 MT-KIVFMGTPAFSAPILRMLHEEGYDIAAVVTQPDRPVG-RKKVLTPPPVKEEALRLGL 58
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P K G +E E+ L+ NAD+ V A+G ++P+ +L A +LG N HASLLP +RG
Sbjct: 59 PVIQPEKLRGSQELEEILALNADIVVTAAFGQILPKELLEAPRLGCINVHASLLPAYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G TG+ IM M + LD G + R++ I NT + +LS + +
Sbjct: 119 APIHQAIIDGQASTGVTIMYMAEKLDAGDIISQREIAIEDTDNTGTMFDKLSAVGRELLK 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E M + PQ E+ +T+A IS+ + +++ A ++N +R L P+P A+
Sbjct: 179 ETMPSIIDGTNARIPQDESLVTFARNISREQELIDWNNEARALYNQVRGLHPWPVAYTTF 238
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLD 293
N K+ +++ E PGEV+ +F +A G+ + + +Q AG + +
Sbjct: 239 EGANF----KVWAAKVGETATNAAPGEVVKIEKDHFEVATGDGSTLALYDVQPAGKKRMT 294
Query: 294 IGDFLL--GCPVIIGCIV 309
+FL G + IG
Sbjct: 295 AEEFLRGTGSKLQIGDRF 312
>gi|258626113|ref|ZP_05720964.1| methionyl-tRNA formyltransferase [Vibrio mimicus VM603]
gi|258581639|gb|EEW06537.1| methionyl-tRNA formyltransferase [Vibrio mimicus VM603]
Length = 315
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 118/314 (37%), Positives = 175/314 (55%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAG-RGKKLTASPVKTLALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P EE +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSEESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ IM+MD LDTG + + +PI ++ +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ + Q Q + YA K+SK E R+N+ A ++ IRA +P+P + E+
Sbjct: 183 CLEDIVQGTAVAVKQDDALANYAHKLSKEEARINWNDEAAHIERCIRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E++ V PG +I +A Q + + LQ G + L + D
Sbjct: 243 ENSIKVWQVRVETRAV--TQTPGTIIQADKSGIYVATGQDVLVLESLQIPGKKALPVQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNARADWFSVGSQL 314
>gi|255263286|ref|ZP_05342628.1| methionyl-tRNA formyltransferase [Thalassiobium sp. R2A62]
gi|255105621|gb|EET48295.1| methionyl-tRNA formyltransferase [Thalassiobium sp. R2A62]
Length = 297
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 135/303 (44%), Positives = 182/303 (60%), Gaps = 10/303 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT +F+V L ALV + H +V+ Y QPPRPAG RG K S V +A+ +
Sbjct: 1 MRVIFMGTPDFSVPVLDALVEAGHDVVAAYCQPPRPAG-RGKKDRPSPVQARAEALGIEL 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + F + AD+AVVVAYGL++PQ +L+A K G N HASLLPRWRGAAP
Sbjct: 60 RHPVSIKGPQELADFAALEADIAVVVAYGLILPQAVLDAPKWGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAI+AGD ETG+ IM+M+ LDTGPV + + + L A
Sbjct: 120 IHRAILAGDAETGVCIMQMEAGLDTGPVLSR---ESFAIGDEETTGELHDRLSALGARMI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D L ++++ Q G+TYA KI K E RV++ SA V HIR LSPFPGAW+E+
Sbjct: 177 VDALARDDVMAVSQDAEGVTYAAKIDKAEARVDWNLSAAQVSAHIRGLSPFPGAWIEVAG 236
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KLL +++V+G G G V+ FT+AC +GAV I R QRAG + +D + L G
Sbjct: 237 ----ERVKLLGARVVDGSGAAGAVL-DGFTVACGEGAVEITRAQRAGKKPMDAAEVLKGL 291
Query: 302 PVI 304
+
Sbjct: 292 TLP 294
>gi|28210908|ref|NP_781852.1| methionyl-tRNA formyltransferase [Clostridium tetani E88]
gi|33516860|sp|Q895Q1|FMT_CLOTE RecName: Full=Methionyl-tRNA formyltransferase
gi|28203347|gb|AAO35789.1| methionyl-tRNA formyltransferase [Clostridium tetani E88]
Length = 310
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 90/314 (28%), Positives = 161/314 (51%), Gaps = 13/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT EFAV +L+ L+ + +V+TQP RP G RG K +S + + A ++
Sbjct: 2 MKIVFMGTPEFAVPSLERLIK-EFGVKAVFTQPDRPKG-RGKKLSISPIKEVALRENIKI 59
Query: 63 LVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + +E E + D +VVAYG ++ + IL+ K G N HASLLP++RGAA
Sbjct: 60 LQPQKLRDDREAIEFLKKLSPDFIIVVAYGQILSKEILDIPKYGCINLHASLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ +G M MD LDTG + + I N L +L +V+
Sbjct: 120 PINWAIINGEKFSGNTTMFMDVGLDTGDMLLKDEFKIEDNTTAGELHNKLMESGGELLVK 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L ++++ Q + YA + K ++N+ +E++ N I+ L+P+P A+
Sbjct: 180 TINGLVEDSIEPEKQKDEESCYASMLDKKMAKINWNLESEDIKNLIKGLNPWPLAYTYYK 239
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
K+ E+++++ + PG +I +A G + + ++Q + + +
Sbjct: 240 GTMM----KIYEAEIIDKKEDFSPGFIIDVSKGGIKVATKDGILLLKKIQFPSKKPMYVE 295
Query: 296 DFLLGCPVIIGCIV 309
+++ G + G I+
Sbjct: 296 EYIRGNKIEKGIIL 309
>gi|323705506|ref|ZP_08117081.1| methionyl-tRNA formyltransferase [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323535408|gb|EGB25184.1| methionyl-tRNA formyltransferase [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 313
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 102/313 (32%), Positives = 167/313 (53%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT EFAV +L+ LV H+++ TQP +P G RG K V + A + +
Sbjct: 1 MNIVFMGTPEFAVPSLKKLVEFGHNVMLAITQPDKPKG-RGKKLSFPPVKEFAIKHGIEV 59
Query: 63 LVP--TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K +E +E+ ++ VV AYG ++P+ IL K G N HASLLP++RGAA
Sbjct: 60 YQPLKLKNNEEVFEKIRRLKPELIVVAAYGKILPEEILKIPKFGCVNVHASLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI A++ G+ ETGI IM M+K LDTG + + +PI N + +L++L +++
Sbjct: 120 PINWAVINGEKETGITIMYMEKGLDTGDILLQKSIPILEEDNAETIHDKLAILGGDVLID 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ + L Q ++ TYA + K +N+ + A + N IR L P+PGA+
Sbjct: 180 AINMMCNGTLMSLKQDDSKATYAPMLEKSMGLINWEKDAIEIRNLIRGLRPWPGAYTYYN 239
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+K+ + + G KPG +I + I C + A++++ +Q G R +++ D
Sbjct: 240 GSM----LKIWSADVYHYSGDEKPGTIIESDDTLIIKCGKEALKVIEIQGEGTRKMNVED 295
Query: 297 FLLGCPVIIGCIV 309
+L G + G +
Sbjct: 296 YLRGHLIKKGEQL 308
>gi|87200907|ref|YP_498164.1| methionyl-tRNA formyltransferase [Novosphingobium aromaticivorans
DSM 12444]
gi|123749699|sp|Q2G493|FMT_NOVAD RecName: Full=Methionyl-tRNA formyltransferase
gi|87136588|gb|ABD27330.1| methionyl-tRNA formyltransferase [Novosphingobium aromaticivorans
DSM 12444]
Length = 301
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 128/309 (41%), Positives = 181/309 (58%), Gaps = 9/309 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT +FAV TL+ALV++ H +V+ Y+QPPRPAG RG K S VH A+ +
Sbjct: 1 MRIIFMGTPDFAVPTLEALVAAGHDVVAAYSQPPRPAG-RGKKLQPSPVHLAAEAHGIDV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G +E +F+ADVAVV AYGL++PQ +L+A +LG N H SLLPRWRGAAP
Sbjct: 60 RTPVSLKGADEQTTLAAFDADVAVVAAYGLILPQAVLDAPRLGCLNVHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRAI+AGD TG+ IM+M++ LDTGP+ + P+ + A +
Sbjct: 120 VQRAILAGDEMTGVTIMQMERGLDTGPMLARIETPVDGKTAGDLTAELAVKGAALMVQVL 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
D P Q E G+TYA KI K E+R++F R A +V +RA SP PGA+ E+
Sbjct: 180 ADLAS---YPAVVQPEQGVTYAHKIDKAESRLDFTRDAVDVERQVRAFSPAPGAFFELEG 236
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER ++L ++++ G+PG ++ IAC GA+R +QRAG +D L G
Sbjct: 237 ----ERYRVLAAEVLGVAGEPGVTVDDVLAIACGTGAIRPTLIQRAGRPAMDTASLLRGR 292
Query: 302 PVIIGCIVG 310
+ G +G
Sbjct: 293 AIPGGTRLG 301
>gi|253580145|ref|ZP_04857412.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848664|gb|EES76627.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 324
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 91/313 (29%), Positives = 157/313 (50%), Gaps = 9/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV +L AL + +++ +V TQP +P G RG + + V ++A +P
Sbjct: 10 MKIVFMGTPDFAVPSLHALTEAGYAVAAVVTQPDKPKG-RGKTLLPTPVKEEAVMHDIPV 68
Query: 63 LVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ N ++ VV AYG +IP+ IL K G N HASLLP++RGAA
Sbjct: 69 YQPEKVRNNPEFLEILKEINPEIIVVAAYGQIIPKEILELPKFGCINIHASLLPKYRGAA 128
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ+A++ G+ +G+ I +M + LDTG + +PIS L +L+ A +++
Sbjct: 129 PIQQAVIDGEKVSGVTIQQMGEGLDTGDMISKIVIPISPTETGGSLFGKLAQAGADLLIK 188
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETR-VNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +EQ Q E T + + ++F +SAE + +R L+P+P A+ +
Sbjct: 189 TLPSIEQGTAEFEKQPEESPTPYAAMITKQMGLMDFRKSAEELERLVRGLNPWPSAYTFL 248
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
K ++ + + + PG + AC +G + + +Q G + ++
Sbjct: 249 --NGKTLKVWKCKVSTEKTDAVPGTIFLADKEGIHTACGEGVLILTEVQLEGKKRMETEA 306
Query: 297 FLLGCPVIIGCIV 309
FL G + G +
Sbjct: 307 FLRGYHIENGIVF 319
>gi|86137257|ref|ZP_01055835.1| methionyl-tRNA formyltransferase [Roseobacter sp. MED193]
gi|85826581|gb|EAQ46778.1| methionyl-tRNA formyltransferase [Roseobacter sp. MED193]
Length = 302
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 143/309 (46%), Positives = 191/309 (61%), Gaps = 9/309 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT EF+V L ALV++ H I +VY QPPRPAG RG K + VH +A +
Sbjct: 1 MRIIFMGTPEFSVPVLDALVAAGHEIAAVYCQPPRPAG-RGKKDRPTPVHARALDLGFEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G E +F + AD+AVVVAYGL++PQ IL+A G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKGTAEQAEFAALGADIAVVVAYGLILPQAILDAPAKGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD+ETG+ IM+M+ LDTGPV PI T+ L LS + A +V A
Sbjct: 120 IHRAIMAGDDETGVCIMQMEAGLDTGPVLLREGTPIGEEETTSQLHDRLSEMGASLIVTA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L+ L Q + G+TYA KI K E ++++ + A V IR LSPFPGAW+E+
Sbjct: 180 LRHLD--GLTPDVQPDEGVTYAVKIDKNEAQIDWSQPATEVDRKIRGLSPFPGAWVEI-- 235
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN-PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+R+KLL S+L G+G+PG+V++ +AC +GAV ++RLQRAG D F G
Sbjct: 236 --DGQRVKLLASRLASGDGQPGQVLDGDRLVLACGEGAVELLRLQRAGKAAQDREIFTRG 293
Query: 301 CPVIIGCIV 309
P+ G +
Sbjct: 294 FPLETGRQL 302
>gi|254225569|ref|ZP_04919178.1| methionyl-tRNA formyltransferase [Vibrio cholerae V51]
gi|125621889|gb|EAZ50214.1| methionyl-tRNA formyltransferase [Vibrio cholerae V51]
Length = 315
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 118/314 (37%), Positives = 176/314 (56%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAG-RGKKLTASPVKTLALEHNVP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ IM+MD LDTG + + +PI ++ +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q Q + YA K+SK E R+N+ +A ++ IRA +P+P + E+
Sbjct: 183 CLQDIAQGTAVAVKQDDGLANYAYKLSKEEARINWSDAATHIERCIRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E+Q V PG ++ +A QG + + LQ G + L + D
Sbjct: 243 ENSIKVWQARVETQAV--TQAPGTIVQADKSGIYVATGQGVLVLESLQIPGKKALPVQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNARADWFSVGSQL 314
>gi|50914730|ref|YP_060702.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes MGAS10394]
gi|68051960|sp|Q5XAP4|FMT_STRP6 RecName: Full=Methionyl-tRNA formyltransferase
gi|50903804|gb|AAT87519.1| Methionyl-tRNA formyltransferase [Streptococcus pyogenes MGAS10394]
Length = 311
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 98/314 (31%), Positives = 162/314 (51%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +F+ L+ L+ + + I+ V TQP R G R ++ V + A E +
Sbjct: 2 IKLLFMGTPQFSATVLKGLLDNPAYEILGVVTQPDRAVG-RKKDIKVTPVKQLALEHGIS 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL + ++ ++ A +L + N HASLLP++RG AP
Sbjct: 61 IYQPEKLSGSQELIEITGLGADGIITAAFGQFLPTLLLDSVSFAINVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM GD E G+ IM+M K +D G V PI N L ++L+++ ++++
Sbjct: 121 IHYAIMNGDKEAGVTIMEMIKEMDAGDVVAKASTPILETDNVGTLFEKLAIIGRDLLLDS 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L PQ + T++ IS + ++++ S + V NHIR ++P+P A +
Sbjct: 181 LPAYLSGELKPIPQDHSQATFSPNISPEQEKLDWTMSNQEVFNHIRGMNPWPVAHTFLEG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R+K+ E+QL EGEG PG+VI + IA QGA+ ++ +Q AG + I DFL
Sbjct: 241 ----QRLKIYEAQLAEGEGLPGQVIVKTKKSLVIATGQGALSLIVVQPAGKPKMSIIDFL 296
Query: 299 L--GCPVIIGCIVG 310
G + +G I+G
Sbjct: 297 NGIGRKLEVGDIIG 310
>gi|94990963|ref|YP_599063.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes MGAS10270]
gi|122986995|sp|Q1JFP0|FMT_STRPD RecName: Full=Methionyl-tRNA formyltransferase
gi|94544471|gb|ABF34519.1| Methionyl-tRNA formyltransferase [Streptococcus pyogenes MGAS10270]
Length = 311
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 161/314 (51%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +F+ L+ L+ + + I+ V TQP R G R ++ V + A E +
Sbjct: 2 IKLLFMGTPQFSATVLKGLLDNPAYEILGVVTQPDRAIG-RKKVIKVTPVKQLALEHGIS 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL + + ++ A IL + N HASLLP++RG AP
Sbjct: 61 IYQPEKLSGSQELIEIMGLGADGIITAAFGQFLPTILLDSVSFAINVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM GD + G+ IM+M K +D G + PI N L ++L+++ ++++
Sbjct: 121 IHYAIMNGDKKAGVTIMEMIKEMDAGDMVAKASTPILETDNVGTLFEKLAIIGRDLLLDS 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L PQ + T++ IS + ++++ S + V NHIR ++P+P A +
Sbjct: 181 LPAYLSGELKPIPQDHSQATFSPNISPEQEKLDWTMSNQEVFNHIRGMNPWPVAHTFLEG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R+K+ E+QL EGEG PG+VI + IA QGA+ ++ +Q AG + I DFL
Sbjct: 241 ----QRLKIYEAQLAEGEGLPGQVIVKTKKSLVIATGQGALSLIVVQPAGKPKMSIIDFL 296
Query: 299 L--GCPVIIGCIVG 310
G + +G I+G
Sbjct: 297 NGIGRKLEVGDIIG 310
>gi|157959860|ref|YP_001499894.1| methionyl-tRNA formyltransferase [Shewanella pealeana ATCC 700345]
gi|189044558|sp|A8GYH2|FMT_SHEPA RecName: Full=Methionyl-tRNA formyltransferase
gi|157844860|gb|ABV85359.1| methionyl-tRNA formyltransferase [Shewanella pealeana ATCC 700345]
Length = 321
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 118/316 (37%), Positives = 179/316 (56%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L V+F GT +FA LQAL+ S H++++VYTQP RPAG RG K S V A E +
Sbjct: 3 PLNVIFAGTPDFAARHLQALIDSEHNVIAVYTQPDRPAG-RGKKLQASPVKALALENDIA 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E+ + L+ D+ VVVAYGL++P+ +L+ +LG N H S+LPRWRGAA
Sbjct: 62 VFQPKSLRDEDAQAELAALNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ IM+MD LDTG + +PI N ++ L ++L+ A+VE
Sbjct: 122 PIQRALWAGDTETGVTIMQMDIGLDTGDMLLKTLLPIEDNDTSSTLYEKLAEQGPTALVE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ + + LP Q E+ YAEK+SK E R+++ + A + IRA +P+P + E
Sbjct: 182 ALAGIAEGTLPAEKQDESLANYAEKLSKEEARLDWSKPASALWREIRAFNPWPVSHYE-- 239
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++ IK+ +S + + +PG ++ +IA +G + I ++Q G + L +
Sbjct: 240 --HEGNTIKVWQSSVSDETSSQQPGTILSADKSGISIATGEGVLTITQMQLPGKKPLSVA 297
Query: 296 DFLLGCP--VIIGCIV 309
D L G ++
Sbjct: 298 DILNSRADWFTPGTVL 313
>gi|281424254|ref|ZP_06255167.1| methionyl-tRNA formyltransferase [Prevotella oris F0302]
gi|281401523|gb|EFB32354.1| methionyl-tRNA formyltransferase [Prevotella oris F0302]
Length = 326
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 160/317 (50%), Gaps = 15/317 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+VFMGT EFAVA+L+ LV +++V+V TQP +P GR + S V + A
Sbjct: 1 MKKEELRIVFMGTPEFAVASLRRLVEGGYNVVAVVTQPDKPVGRHQEQLQPSQVKQYAVA 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+P L P K+ + + L VV ++P+ + + G +N HA+LLP++R
Sbjct: 61 HGIPVLQPVKMKDPAFVEELRSYEADLQVVVAFRILPEIVWAMPRFGTFNVHAALLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI AI+ G+ ETG+ +DK +DTG + + I + + L L A
Sbjct: 121 GAAPINWAIINGETETGVTTFFLDKDIDTGKIIMQKHFAIPDEADVEYVYDGLMHLGAEI 180
Query: 178 MVEAMDKLEQNNLP--------LSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL 229
+E +DK+ +NN S E+ + A KI K ++++ A+ V++ +R L
Sbjct: 181 AIETIDKMLENNGNIDSISQGDFSQFSEDELKIAPKIFKETCQIDWTLPAKRVYDFVRGL 240
Query: 230 SPFPGAWLEMMIGNKHERIKLLESQLVE--GEGKPG--EVINPNFTIACSQGAVRIMRLQ 285
SP+PG W + + +K+ ++ G G+ G ++ + + C + ++ LQ
Sbjct: 241 SPYPGTWTHLEENGRQSVLKIFKTAKTSAIGSGETGSIKIDKGHLYVMCGDAWLEVLELQ 300
Query: 286 RAGGRVLDIGDFLLGCP 302
AG + ++ DFL G
Sbjct: 301 MAGKKRMNARDFLNGMR 317
>gi|167648523|ref|YP_001686186.1| methionyl-tRNA formyltransferase [Caulobacter sp. K31]
gi|189044503|sp|B0T1S7|FMT_CAUSK RecName: Full=Methionyl-tRNA formyltransferase
gi|167350953|gb|ABZ73688.1| methionyl-tRNA formyltransferase [Caulobacter sp. K31]
Length = 312
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 134/312 (42%), Positives = 182/312 (58%), Gaps = 6/312 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ F+GT EF+VA L LV++ H I VY+QPP P G RG S VH A+ LP
Sbjct: 1 MRIAFLGTPEFSVACLAELVAAGHEIACVYSQPPAPRG-RGQDLKPSPVHAFAESLGLPV 59
Query: 63 LVPT-KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P EE E F + + D AVVVA+G ++ + +L A +LG +N HASLLPRWRGAAP
Sbjct: 60 RTPVSMKTAEEIEAFRALDLDAAVVVAFGQILVRDVLEAPRLGCFNLHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD TG+ +M+M + LD GPV +V I + L +L+ + + + A
Sbjct: 120 IQRAIMAGDAVTGVQVMRMSEGLDEGPVLMGEQVRIDALETAGTLHDKLAAVGSRMLPVA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ +PQ E G+TYA+KI E R+++ RSA V HIR LSPFPGAW E
Sbjct: 180 LAAIERGGARETPQSEEGVTYAKKIKAAEARIDWTRSAAEVDRHIRGLSPFPGAWFEAPS 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACS----QGAVRIMRLQRAGGRVLDIGDF 297
R+K L S++ +GEG PG ++ IAC GAVR+++ QR G D F
Sbjct: 240 EKGSVRVKALLSRVEDGEGAPGVALDDALLIACGANGEGGAVRLLKAQREGKGAQDAEVF 299
Query: 298 LLGCPVIIGCIV 309
L G P+ G +
Sbjct: 300 LRGFPLAAGTAL 311
>gi|309798768|ref|ZP_07693032.1| methionyl-tRNA formyltransferase [Streptococcus infantis SK1302]
gi|308117585|gb|EFO54997.1| methionyl-tRNA formyltransferase [Streptococcus infantis SK1302]
Length = 311
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 94/316 (29%), Positives = 155/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT EF+ L+ L+ + IV+V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPEFSATVLKGLLTDDRYEIVAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + +V A L + N HASLLP+ RG
Sbjct: 59 LPIYQPEKLSGSPEMEAIMNLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLAIVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGEIQPQPQDLSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
ER K+ E VEG G PGE++ +A ++GA+ ++Q AG +DI
Sbjct: 239 KG----ERFKIYEVLPVEGHGTPGEILSIGKKELIVATAEGALSFKQVQPAGKPKMDITS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLAVGERFG 310
>gi|262282215|ref|ZP_06059984.1| methionyl-tRNA formyltransferase [Streptococcus sp. 2_1_36FAA]
gi|262262669|gb|EEY81366.1| methionyl-tRNA formyltransferase [Streptococcus sp. 2_1_36FAA]
Length = 311
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 91/316 (28%), Positives = 159/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ S + +++V TQP R G R + ++ V + A +
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLESDQYEVLAVVTQPDRAVG-RKKEIRITPVKEVALSYG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + +V A L A+ N HASLLP+ RG
Sbjct: 59 LPIYQPEKLSGSPEMETIMNLGADGIVTAAFGQFLPSKLLASMNFVVNVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD ETG+ IM+ K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDKETGVTIMETVKEMDAGDMISRRSIPITDEDNVGTLFEKLAIVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + Q + ++++ I E R+++ ++ + N IR ++P+P A
Sbjct: 179 DTLPAYLAGEIQPEAQDPSQVSFSPNIRPEEERLDWNKTNRQLFNQIRGMNPWPVAHT-- 236
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER K+ E++L +GEG+PGE++ +A +GA+ +Q AG + I D
Sbjct: 237 --LWQGERFKIYEAELADGEGRPGEILEIGKRQLLVATGEGALAFKTVQPAGKPQMTISD 294
Query: 297 FLLGC--PVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGAGRNLAVGDKFG 310
>gi|328951364|ref|YP_004368699.1| Methionyl-tRNA formyltransferase [Marinithermus hydrothermalis DSM
14884]
gi|328451688|gb|AEB12589.1| Methionyl-tRNA formyltransferase [Marinithermus hydrothermalis DSM
14884]
Length = 311
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 104/315 (33%), Positives = 162/315 (51%), Gaps = 11/315 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R+ F G+ +AV L+AL ++ H +V V TQP +PAG RGL + V + A L
Sbjct: 1 MRRRLAFFGSPAWAVPVLEAL-AAHHEVVLVVTQPDKPAG-RGLALTPAPVAEAAARLGL 58
Query: 61 PALVPTKLGQE--EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
P P +L E+F + D AV AYG ++P +L + GF N H SLLP++RG
Sbjct: 59 PVEKPARLKGNAAFLERFKTLGLDAAVTAAYGKLLPPELLEVPRHGFLNLHPSLLPKYRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+Q A++ G+ ETG+ IM+ D LDTGP+ + PI + L + L +
Sbjct: 119 AAPVQWALIRGERETGVTIMRTDAGLDTGPILLQWRTPIHPDETALELAERLRDKGIQLL 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+EA+++LE P A ++K + R+ + A V++ R + P+PG+W
Sbjct: 179 LEALERLEDLEPRPQPADGTY---APLLTKEDGRIRWTDPARAVYDRHRGVQPWPGSWFM 235
Query: 239 MM-IGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDI 294
G R+K+ EG+G PGEV+ +A +GAVR++ +Q G R +
Sbjct: 236 HARDGGGRVRVKVHALFPAEGQGAPGEVLAVEPEGVRVAVGEGAVRLVEVQPEGKRRMPA 295
Query: 295 GDFLLGCPVIIGCIV 309
D+ G + +G +
Sbjct: 296 ADWARGYGLRVGARL 310
>gi|303228531|ref|ZP_07315359.1| methionyl-tRNA formyltransferase [Veillonella atypica
ACS-134-V-Col7a]
gi|302516778|gb|EFL58692.1| methionyl-tRNA formyltransferase [Veillonella atypica
ACS-134-V-Col7a]
Length = 335
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 100/329 (30%), Positives = 163/329 (49%), Gaps = 29/329 (8%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VFMGT +F+V TL+ALV + HSIV VY QP + G RG + + V + A LP
Sbjct: 6 PLRIVFMGTPDFSVPTLRALVEAGHSIVGVYCQPDKQKG-RGKQIQMPPVKEAALSLDLP 64
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ + DV VV+AYG ++P ++ K G N HAS+LP++RGAA
Sbjct: 65 VYQPITLRDDAVQKELIDLAPDVIVVIAYGKILPPWLIRLPKYGCINIHASILPKYRGAA 124
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ GD +TG+ IM MD LDTG + + ++ I N T L + ++ L A +
Sbjct: 125 PIHYAILNGDTKTGVTIMHMDDGLDTGDIIDIAEIDILPNETTGALFERIAELGARTISP 184
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+DK + + +PQ + ++ KI+K +++ + A + N IR L+P PG + +
Sbjct: 185 VLDKWVKGEITATPQDDALASHTSKITKEMGLIDWHQPAHKIVNLIRGLNPAPGCYSFLQ 244
Query: 241 IGNKHERIKLLESQLVEGE--------------------GKPGEVIN--PNFTIACSQ-G 277
+R+K+ +Q+VE PG +++ ++ G
Sbjct: 245 G----KRLKIWSAQMVEITSVNDKMATIFVNNNEIPVEFAPPGTIVHSAKGLVVSTGDQG 300
Query: 278 AVRIMRLQRAGGRVLDIGDFLLGCPVIIG 306
+ +Q + + DF+ G + G
Sbjct: 301 FTLLTEVQPENKKRISAQDFINGHQIKGG 329
>gi|83642942|ref|YP_431377.1| methionyl-tRNA formyltransferase [Hahella chejuensis KCTC 2396]
gi|123753707|sp|Q2SQX2|FMT_HAHCH RecName: Full=Methionyl-tRNA formyltransferase
gi|83630985|gb|ABC26952.1| methionyl-tRNA formyltransferase [Hahella chejuensis KCTC 2396]
Length = 318
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 118/314 (37%), Positives = 181/314 (57%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+V+F GT +FA + LQAL+ +++ IV+VYTQP RPAG RG K + V + A + ++P
Sbjct: 4 PLKVIFAGTPDFAASALQALLDANYQIVAVYTQPDRPAG-RGNKLLPGPVKQLALKHTIP 62
Query: 62 ALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E+ +Q + ADV VV AYG+++PQ +L+A K G N HASLLPRWRGAA
Sbjct: 63 VEQPLNFKNEEDRQQLRDYEADVMVVAAYGIILPQAVLDAPKRGCLNIHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI+AGD E+GI IM+M+ LDTGP+ PIS++ L L+ + A+V+
Sbjct: 123 PIQRAIIAGDQESGITIMQMEAGLDTGPMLLKTVTPISADDTGRTLHDRLAQMGGEAIVK 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L+++ L Q ++ TYA K+ K E R+++ A + I A +P+P + E
Sbjct: 183 ALALLQEDKLQAERQQDDLATYAHKLQKEEARIDWSEPASLIQRKIAAFNPWPVCFTE-- 240
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ RI + + KPG ++ +AC +G + I LQ GG+ + D
Sbjct: 241 DNGQTIRIWAASASADMSKAKPGTILERSAEAVKVACGEGVLSITSLQLPGGKPISCKDL 300
Query: 298 LLGCP--VIIGCIV 309
+ G + +G ++
Sbjct: 301 INGGKPLMQLGQVL 314
>gi|322374812|ref|ZP_08049326.1| methionyl-tRNA formyltransferase [Streptococcus sp. C300]
gi|321280312|gb|EFX57351.1| methionyl-tRNA formyltransferase [Streptococcus sp. C300]
Length = 311
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 90/316 (28%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E +
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLSDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAN 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + +V A L + N HASLLP+ RG
Sbjct: 59 LPIYQPEKLSGSPEMEAIMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDKEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ + +T++ I E ++++ ++ + N IR ++P+P +
Sbjct: 179 DTLPGYIAGEIKPVPQDPSQVTFSPNIKPEEEKLDWTKTNRQLFNQIRGMNPWPVTHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGAPGEILSIGKKELIVAAAEGALSLKQVQPAGKPKMDISS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|254429224|ref|ZP_05042931.1| methionyl-tRNA formyltransferase [Alcanivorax sp. DG881]
gi|196195393|gb|EDX90352.1| methionyl-tRNA formyltransferase [Alcanivorax sp. DG881]
Length = 330
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 119/315 (37%), Positives = 170/315 (53%), Gaps = 7/315 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+ F GT +FA A+LQA++ S H +V+V TQP R AG RG K S V + A +
Sbjct: 3 PLRLAFAGTPDFAAASLQAVLDSDHQVVAVLTQPDRAAG-RGKKVQQSPVKQLAASQDIA 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P G++ +Q + D VVVAYGL+IPQ +L+ +L N H SLLPRWRGAA
Sbjct: 62 VLQPENLKGEDIRQQLRDLDLDALVVVAYGLIIPQAVLDIPRLSCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI GD ETG IM+M+ LDTGP+ +PI + L L+ A +V
Sbjct: 122 PIQRAITTGDTETGNTIMQMEAGLDTGPMLLSEALPIGESETGGELHDRLATQGARLLVT 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ LE + +PQ + G+TYA K+SK E R++F ++N IRA +PFP +W+ +
Sbjct: 182 VLNDLEHHLANATPQPDEGVTYAHKLSKAEARLDFRLPTRALYNRIRAFNPFPVSWVPLN 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
Q + +PG ++ + +A GA+ + LQ G R + + D
Sbjct: 242 GQPMRIWQASESPQPGQDNDEPGHILAVDDQGIHVATGDGALILEELQLPGKRRMAVSDL 301
Query: 298 LLGCP--VIIGCIVG 310
L G P +G +G
Sbjct: 302 LRGNPALFTVGEPLG 316
>gi|311696634|gb|ADP99507.1| methionyl-tRNA formyltransferase [marine bacterium HP15]
Length = 311
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 117/313 (37%), Positives = 175/313 (55%), Gaps = 9/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT +FA L+AL+++ H+IV VY+QP RPAG RG K S V + A + +
Sbjct: 1 MRLVFAGTPDFAATALRALIAAGHTIVGVYSQPDRPAG-RGRKLQPSPVKQVALDHGIQV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L + ++ L+ N DV +V AYGL++P+ +L+ G N HASLLPRWRGAAP
Sbjct: 60 FQPETLKTPDAQKQLADLNPDVMIVAAYGLILPKAVLDIPTHGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETGI IM+MD+ LDTG + I N L L+ L A+++A
Sbjct: 120 IQRAIAAGDAETGITIMQMDEGLDTGAMLLKSLTTIEDNDTGGSLHDRLAELGGQAIIKA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ L++ L PQ + YA K+SK E +++ A + +RA +P+PG + ++
Sbjct: 180 LELLKKGELTGEPQNDQLACYASKLSKTEGHIDWAADATAIERLVRAFNPWPGTYTDLG- 238
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
++ RI ++ + + PG V+ IAC G +RI RLQ G R + D +
Sbjct: 239 -DQRIRIHEAQALVTASDAFPGTVVQRDRDGIDIACGNGTLRITRLQLPGSRAQSVNDLI 297
Query: 299 LGCP--VIIGCIV 309
G ++ G +
Sbjct: 298 NGGKELLMPGQEL 310
>gi|332364576|gb|EGJ42345.1| methionyl-tRNA formyltransferase [Streptococcus sanguinis SK1059]
Length = 311
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 157/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +F+ L+ L+ S + +++V TQP R G R + ++ V + A E+ L
Sbjct: 2 MKIIFMGTPDFSAIVLKGLLDSGQYEVLAVVTQPDRAVG-RKREIRMTPVKELALEYGLQ 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL Q + L +V A L + N HASLLP++RG AP
Sbjct: 61 VYQPEKLAQSSDLEELMNLEADGIVTAAFGQFLPSRLLDSVDFAVNVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ GD + G+ IM+M K +D G + R V I N L ++L+++ +++
Sbjct: 121 IHYALINGDEQVGVTIMEMVKEMDAGDMIASRAVQIEETDNVGTLFEKLALIGRDLLLDV 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + PQ + +T++ IS E R+++ ++ + N IR + P+P A +
Sbjct: 181 LPAYRAGQIIPQPQDPSQVTFSPNISPEEERIDWSKTNRQIFNQIRGMYPWPVAHTLLQG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R K+ E+ +V G G+PG+++ +A +GA+ + +Q AG + I DFL
Sbjct: 241 ----QRFKIYEADMVAGSGQPGQILSISKKELVVAAGKGALSLKTVQPAGKPKMAIVDFL 296
Query: 299 L--GCPVIIGCIVG 310
G + +G G
Sbjct: 297 NGLGRSLSLGDTFG 310
>gi|322373357|ref|ZP_08047893.1| methionyl-tRNA formyltransferase [Streptococcus sp. C150]
gi|321278399|gb|EFX55468.1| methionyl-tRNA formyltransferase [Streptococcus sp. C150]
Length = 311
Score = 180 bits (456), Expect = 3e-43, Method: Composition-based stats.
Identities = 100/316 (31%), Positives = 158/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT ++VFMGT F+ L+ L+ + IV+V TQP R G R + ++ V + A
Sbjct: 1 MT-KLVFMGTPAFSATVLEGLLTDERYEIVAVVTQPDRAVG-RKKEIRMTPVKEVALAHD 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL E + +V A L + N HASLLP++RG
Sbjct: 59 LPIYQPEKLSGSEEMAQVMALGADGIVTAAYGQFLPSKLLNSMDFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ GD E G+ IM+M K +D G + + +PI N + ++L+VL ++
Sbjct: 119 APIHYAIINGDAEAGVTIMEMVKEMDAGDMVSQKALPILDEDNVGTMFEKLAVLGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + PQ + +T++ IS E R+++ +SA ++ N IR + P+P A +
Sbjct: 179 ETLPAYIAGEVKPVPQDASQVTFSPNISPEEERLDWNKSARDIFNQIRGMYPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E+ LVEG+G+ G +I +A QGA+ + +Q AG + I D
Sbjct: 239 ----DGKRFKIYEADLVEGQGQAGHIIEKTKKRLVVATGQGAISLKTVQPAGKPRMAITD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G + G
Sbjct: 295 FLNGVGRNLEVGDVFG 310
>gi|322412410|gb|EFY03318.1| methionyl-tRNA formyltransferase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 311
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 100/316 (31%), Positives = 163/316 (51%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + ++ I++V TQP R G R + ++ V + A +
Sbjct: 1 MT-KLLFMGTPQFSATVLKGLLENPNYEILAVVTQPDRAVG-RKKEIKMTPVKELALAYD 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + L +V A L N HASLLP++RG
Sbjct: 59 LPVYQPNKLSGSQELAELMTLGADGIVTAAFGQFLPTKLLDAVSFAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AIM G+ E G+ IM+M K +D G + PI N L ++L+++ ++
Sbjct: 119 APIHYAIMNGEKEAGVTIMEMVKEMDAGDMVAKASTPILETDNVGTLFEKLALIGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+++ L PQ + +T++ IS + ++++ + A V NHIR +SP+P A +
Sbjct: 179 DSLPGYLSGELKPIPQDHSQVTFSPNISPEQEQLDWTKPAREVFNHIRGMSPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E+QL EGEG+PGE+I +A QGA+ ++ +Q AG + I D
Sbjct: 239 ----DGQRFKIYEAQLAEGEGQPGEIIAKTKHMLVVAAGQGALSLLVVQPAGKPKMAIAD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G +G
Sbjct: 295 FLNGLGRKLEVGDFIG 310
>gi|260752716|ref|YP_003225609.1| methionyl-tRNA formyltransferase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258552079|gb|ACV75025.1| methionyl-tRNA formyltransferase [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
Length = 308
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 119/308 (38%), Positives = 172/308 (55%), Gaps = 9/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT +FA+ TL ALV + H IV+VY+QP RPAG RG S V K+A+E L
Sbjct: 8 MKIIFMGTPDFALPTLNALVDAGHEIVAVYSQPARPAG-RGKAPRPSPVEKRARELGLNV 66
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E + F ADVAVV AYGL++P+ IL +LG N H SLLP+WRGAAP
Sbjct: 67 YTPVSLKEAETQKIFADHQADVAVVAAYGLLLPKAILEMPRLGCLNVHGSLLPKWRGAAP 126
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+AGD E+G+ IM+MD+ LDTG + + K PI+ A + + +
Sbjct: 127 IQRAILAGDQESGVTIMQMDRGLDTGAMLKIGKTPIADKNAGALSDEIAHIGAKLMVEVL 186
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ P Q E+G +YA KI K E ++F + A IRA +P PGA+
Sbjct: 187 AQPEQ---YPPVKQPESGESYAAKIDKSEALIDFSKGAVQAERQIRAFAPKPGAFFLY-- 241
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ERI++LE+ + G GE ++ + I C +++ + +QRAG + + + D L G
Sbjct: 242 --NEERIRILEAHVQNQAGAVGETLDDHLLIGCGSDSLQPLIVQRAGRKAMKLEDMLRGF 299
Query: 302 PVIIGCIV 309
+ G +
Sbjct: 300 AIPRGTRL 307
>gi|332685779|ref|YP_004455553.1| methionyl-tRNA formyltransferase [Melissococcus plutonius ATCC
35311]
gi|332369788|dbj|BAK20744.1| methionyl-tRNA formyltransferase [Melissococcus plutonius ATCC
35311]
Length = 314
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 95/319 (29%), Positives = 169/319 (52%), Gaps = 15/319 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M +++FMGT F+V L+ L+ + + I +V TQP RP G R + V + A L
Sbjct: 1 MK-KIIFMGTPAFSVPILEGLLQAGYHIQAVVTQPDRPVG-RKKIVTPTPVKEVALRHHL 58
Query: 61 PALVPTKL-GQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P K+ +E E + D+ + A+G +P+++LN G N HASLLP++RG
Sbjct: 59 PILQPEKIANSKEMETIIKGKPDLIITAAFGQFLPEQLLNCATYGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ GD++TGI I+KM K +D G + R++ I+ N + + LS L ++
Sbjct: 119 APVHYALINGDDKTGITIIKMVKKMDAGDILSQRELAITKQDNVGTMFERLSSLGKELLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + K+ +N + PQ E ++++ I++ + ++N+ +++ + N +R + P+P A+
Sbjct: 179 DTLPKILENKINPEPQDEKKVSFSPNITREQEKINWKKASVAIDNQVRGMCPWPIAFTTY 238
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEVINPN---FTIACSQGAVR-IMRLQRAGGRVLD 293
++ KL ++ ++ +PG ++ N IAC + I +Q AG L
Sbjct: 239 ----QNLVWKLWKTTPIDETTTAEPGTIVKKNKKALWIACGDNKLLAIEVVQPAGKGKLS 294
Query: 294 IGDFLLGC--PVIIGCIVG 310
I DFL G + G +G
Sbjct: 295 IQDFLNGFGKSICEGQKLG 313
>gi|308069675|ref|YP_003871280.1| methionyl-tRNA formyltransferase [Paenibacillus polymyxa E681]
gi|305858954|gb|ADM70742.1| Methionyl-tRNA formyltransferase [Paenibacillus polymyxa E681]
Length = 319
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 101/324 (31%), Positives = 170/324 (52%), Gaps = 19/324 (5%)
Query: 1 MT--LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M+ +R++FMGT EFAV +L L+ + +++V V TQP +P G R + V + A++
Sbjct: 1 MSQDIRIIFMGTPEFAVPSLNMLLHNGYNVVGVITQPDKPQG-RKKILTPTPVKEAAEKH 59
Query: 59 SLPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L PT+ E Q D+ V AYG ++P+ +L+ + G N H SLLPR+R
Sbjct: 60 GLPVLQPTRLRQPEAVAQVAELRPDLIVTAAYGQILPKSVLDLPRFGCLNVHGSLLPRYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
G APIQRAI+ G+ TG+ +M M + LDTG + +V I + + ++LSV A
Sbjct: 120 GGAPIQRAIINGETVTGVTLMYMAEGLDTGDMISRVEVAIEPEDTSGTIFEKLSVAGAKL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ + + KL +PQ E+ TYA +++ + R+++ +A+ ++N IR L PF GA+
Sbjct: 180 LQDELPKLLAGQSDRTPQNEDEATYAPNLNRDDERISWNDNAQQIYNRIRGLVPFSGAFT 239
Query: 238 EMMIGNKHERIKLLESQLVEGEGK--------PGEVIN---PNFTIACSQGAVRIMRLQR 286
+ K+ ++ + PG V+ + +G + + ++Q
Sbjct: 240 ----LWEGNVFKIWAAEQPFINNEVSGSNAPVPGTVLQLTARGIEVQTGEGTLWLTQVQP 295
Query: 287 AGGRVLDIGDFLLGCPVIIGCIVG 310
AG +V+D G F G + G ++G
Sbjct: 296 AGKKVMDAGTFARGGQMKQGMVLG 319
>gi|157964274|ref|YP_001499098.1| methionyl-tRNA formyltransferase [Rickettsia massiliae MTU5]
gi|166988369|sp|A8F0W5|FMT_RICM5 RecName: Full=Methionyl-tRNA formyltransferase
gi|157844050|gb|ABV84551.1| Methionyl-tRNA formyltransferase [Rickettsia massiliae MTU5]
Length = 302
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 105/309 (33%), Positives = 170/309 (55%), Gaps = 10/309 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMGT EFAV L+ L+ + H + +V+TQ P+ G RGL S +H+ A E +P
Sbjct: 1 MKVIFMGTPEFAVPALKKLI-THHEVKAVFTQQPKAKG-RGLNLAKSPIHQLAFEHQIPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P+ L + NAD+ VV+AYG ++PQ IL A K G N H S LPR RGAAP+
Sbjct: 59 YTPSTLRNDVINLINKVNADIIVVIAYGFIVPQAILEAKKYGCLNIHPSDLPRHRGAAPL 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QR I+ GD ++ + IM+MD LDTG + + L + + L A +++ +
Sbjct: 119 QRTIIEGDRKSSVCIMRMDTGLDTGDILMKEDFDLEERTTLEELHNKCANLGAELLIKIL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
++ Q +G+TYA K++K E ++N+ SA + IR ++P+PGA+
Sbjct: 179 ANIDNI--VPIKQSSDGVTYAHKLTKEEGKINWHESAYKIDCKIRGMNPWPGAYFSY--- 233
Query: 243 NKHERIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ IK+LE++ + + G VI+ IAC G +R+ +LQ+ + L+I +FL G
Sbjct: 234 -NDKIIKILEAEYLNADHHFTSGTVISDKLEIACGSGILRVKKLQQESKKALNIEEFLRG 292
Query: 301 CPVIIGCIV 309
++ ++
Sbjct: 293 TNILKDTVL 301
>gi|262402049|ref|ZP_06078613.1| methionyl-tRNA formyltransferase [Vibrio sp. RC586]
gi|262351695|gb|EEZ00827.1| methionyl-tRNA formyltransferase [Vibrio sp. RC586]
Length = 315
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 116/314 (36%), Positives = 175/314 (55%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAG-RGKKLTASPVKTHALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD++TG+ IM+MD LDTG + + +PI ++ +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDSDTGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ Q Q + YA K+SK E R+N+ A ++ IRA +P+P + E+
Sbjct: 183 CLQEIAQGTAVAVKQDDTLANYAHKLSKEEARINWNDEAVHIERCIRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E++ V G +I +A QG + + LQ G + L + D
Sbjct: 243 ENSIKVWHARVETRAVTQAS--GTIIQADKSGIYVATGQGILVLESLQIPGKKALPVQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNARADWFSVGSQL 314
>gi|78043011|ref|YP_360315.1| methionyl-tRNA formyltransferase [Carboxydothermus hydrogenoformans
Z-2901]
gi|123743169|sp|Q3AC19|FMT_CARHZ RecName: Full=Methionyl-tRNA formyltransferase
gi|77995126|gb|ABB14025.1| methionyl-tRNA formyltransferase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 308
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 123/312 (39%), Positives = 181/312 (58%), Gaps = 11/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+V+MGT EFAV L L+ S H + V T+P AG RG K + S V AQE L
Sbjct: 1 MRIVYMGTPEFAVKPLAKLI-SHHEVALVVTKPDAAAG-RGKKVISSPVKLFAQENHLRV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ P K +E Y++ L+ +V VV AYG ++P+ ILN G N HASLLP +RGAAPI
Sbjct: 59 ITPLKFNEEVYQEILAVKPEVIVVAAYGKLLPREILNIPPYGCLNIHASLLPFYRGAAPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
+R +MAG+ ETGI IM MD+ LDTG +A KV I+ I L++ L+ + A ++EA+
Sbjct: 119 ERCLMAGEKETGITIMFMDEGLDTGDIALQEKVAINQEITGGELRKILAEIGADLIIEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+L + LP PQ TYA + K + +++ SAE + N IRAL+P PGA+
Sbjct: 179 KRLREGGLPRVPQDHQLATYAPPLKKEDEIIHWADSAEKIRNQIRALNPVPGAYTVF--- 235
Query: 243 NKHERIKLLESQLVEGEGK-PGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ ++IK+ ++++ E GK PGE+I F +A + ++I+ LQ GG+ + F
Sbjct: 236 -RGKKIKIWKAKVGEFSGKKPGEIIFADRKNGFLVATGERGLQILELQPEGGKKMSWESF 294
Query: 298 LLGCPVIIGCIV 309
L G ++G
Sbjct: 295 LNGYRPLVGETF 306
>gi|288818292|ref|YP_003432640.1| methionyl-tRNA formyltransferase [Hydrogenobacter thermophilus
TK-6]
gi|288787692|dbj|BAI69439.1| methionyl-tRNA formyltransferase [Hydrogenobacter thermophilus
TK-6]
gi|308751889|gb|ADO45372.1| methionyl-tRNA formyltransferase [Hydrogenobacter thermophilus
TK-6]
Length = 298
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 165/304 (54%), Gaps = 9/304 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGTS FAV +L+ALV + +V V TQP RPA RG K S V K A E L
Sbjct: 1 MKIVFMGTSSFAVPSLKALVEN-FQVVGVITQPDRPA-HRGQKLTPSPVKKMALELGL-C 57
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L + + E L D VVVAYG ++ + +L G N HASLLP++RGAAPI
Sbjct: 58 LYQPEKKSQIEETVLKLKPDCVVVVAYGRILTKEVLGIPPYGCINLHASLLPKYRGAAPI 117
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QR +MAG+ TG +M MD+ +DTG + VPI N L ++LS A +V +
Sbjct: 118 QRCLMAGEKLTGNTVMLMDEGMDTGDILRQESVPIDEEDNLLSLSEKLSTKGAKLLVSTL 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + +PQ TYA I K E R+ + SA++V + +R L P A+LE
Sbjct: 178 KDWFEGKIAPTPQDHQQATYAPPIWKEEYRICWKASAQSVKDRVRGLYPNCYAFLE---- 233
Query: 243 NKHERIKLLESQLVEGEGKPGE-VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+ ERIK+L+ ++ + G+PGE + F +AC + +V ++ L G+ + DFL G
Sbjct: 234 -EGERIKVLKVRVCQESGEPGELIHQRKFQVACGENSVEVLELINPKGKRVSGEDFLRGY 292
Query: 302 PVII 305
V
Sbjct: 293 QVKK 296
>gi|50086580|ref|YP_048090.1| methionyl-tRNA formyltransferase [Acinetobacter sp. ADP1]
gi|73919370|sp|Q6F6P9|FMT_ACIAD RecName: Full=Methionyl-tRNA formyltransferase
gi|49532554|emb|CAG70268.1| methionyl-tRNA formyltransferase [Acinetobacter sp. ADP1]
Length = 319
Score = 180 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 118/319 (36%), Positives = 174/319 (54%), Gaps = 13/319 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT +FA L AL+ + H IV+VYTQP R AG RG K S V + A E +LP
Sbjct: 1 MKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAG-RGQKLTPSPVKQLALEHNLPV 59
Query: 63 LVPTKLGQEE------YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
L P + +FNADV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 LQPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI AGD ETG+ IMKM LDTG + F PI ++ +A L ++L+ A
Sbjct: 120 RGAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAE 179
Query: 177 AMVEAMDKLEQNNL---PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ ++ +Q Q EN YA K+ K E ++++ + A + +IRA +P+P
Sbjct: 180 AICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGR 290
A++ + N + S+L+ + + G++I +AC G V + LQ GG+
Sbjct: 240 VAFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGVVCLTALQWPGGK 299
Query: 291 VLDIGDFLLGCPVIIGCIV 309
L+ + + IG ++
Sbjct: 300 ALNPVQIIQTQKLNIGQVL 318
>gi|163783696|ref|ZP_02178683.1| methionyl-tRNA formyltransferase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881021|gb|EDP74538.1| methionyl-tRNA formyltransferase [Hydrogenivirga sp. 128-5-R1-1]
Length = 300
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 107/308 (34%), Positives = 162/308 (52%), Gaps = 10/308 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT FAV +L+ L+ ++V V TQP RPAG RG + V + A + +
Sbjct: 1 MRILFMGTPRFAVPSLELLL-REFNVVGVVTQPDRPAG-RGKRLTPPPVKELALKQGIEV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P + D VVVAYG ++P+ IL+ G N HASLLP++RGAAPI
Sbjct: 59 YQPESIKGFIGTI-RELKPDCIVVVAYGKILPKDILSVPPYGVVNLHASLLPKYRGAAPI 117
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAIMAG+ TG +M +++ +D G + + I N L + LSV A +V +
Sbjct: 118 QRAIMAGEERTGNTVMLVNERMDAGDILSQEEETIGDEDNLQSLSERLSVKGAELLVRTL 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + PQ E TYA + + E R+ + A++V + IR L P
Sbjct: 178 KLWFGSKIEPEPQREEEATYAPPVQREEYRLCWKAEADSVRDRIRGLYPSVHTSFR---- 233
Query: 243 NKHERIKLLESQLVEGEGKPGEVIN-PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ERIKLL+ ++VEG G+PGE+++ F ++C GAVR++ L G+ + DF+ G
Sbjct: 234 --GERIKLLKVEVVEGYGEPGEIVDPDRFVVSCGSGAVRVLELISPKGKRMKGEDFVRGY 291
Query: 302 PVIIGCIV 309
G ++
Sbjct: 292 SPEKGELL 299
>gi|154485070|ref|ZP_02027518.1| hypothetical protein EUBVEN_02793 [Eubacterium ventriosum ATCC
27560]
gi|149734023|gb|EDM50142.1| hypothetical protein EUBVEN_02793 [Eubacterium ventriosum ATCC
27560]
Length = 308
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 103/314 (32%), Positives = 169/314 (53%), Gaps = 13/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +F+V L+ L H +V+V TQ RP G RG K + V +KA E ++P
Sbjct: 1 MKIVFMGTPDFSVPALEELAKV-HQVVAVITQQDRPKG-RGHKMQYTPVKEKALELNIPV 58
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ E+ N DV VV+A+G ++ + IL+ K G N HASLLP++RGAAP
Sbjct: 59 YQPEKVKNPEFVDILREINPDVIVVIAFGQILSKEILDLPKYGCINVHASLLPKYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ ETG+ M M + LDTG V + + L +L++ +VE
Sbjct: 119 IQWAVIDGEEETGVTTMYMAEGLDTGDVIDTAVIKLDEKETGGSLFDKLAIEGGKLIVET 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ KLE +PQ + +YA KI+K +++F + A + IR L+P+P A+ +
Sbjct: 179 LSKLENGTATRTPQDDEKSSYAGKITKELGQIDFTKPAVTIERLIRGLNPWPSAYTTL-- 236
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ ++ + EG +PGE++ +A + ++I +Q AG + + +
Sbjct: 237 --DGKAMKVWDATVEEGNVTEQPGEIVEIAKHYIKVATGENYLKINEIQLAGKKRMPMDA 294
Query: 297 FLLGCPVIIGCIVG 310
FL G + I+G
Sbjct: 295 FLNGYTIKE-NILG 307
>gi|320116146|ref|YP_004186305.1| methionyl-tRNA formyltransferase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|319929237|gb|ADV79922.1| methionyl-tRNA formyltransferase [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 309
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 106/313 (33%), Positives = 171/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT EFAV +LQ L + + +V TQP + G RG+K S V + A + +
Sbjct: 1 MKIVFMGTPEFAVPSLQKLFEEGYDVAAVVTQPDKQKG-RGMKFSFSPVKEVALQKGVEI 59
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K+ N D VVVAYG ++P+ IL K G N HASLLP++RGAA
Sbjct: 60 LQPEKIKNNPEFLNRLEVINPDAIVVVAYGKILPEEILTLPKYGCINVHASLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ ETGI M MDK LDTG + + +PI + L +LS L A ++E
Sbjct: 120 PINWAIINGEKETGITTMLMDKGLDTGDMLIKKSIPILEEDDAETLHDKLSRLGAEVLIE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ LE+ +L Q E +Y+ ++K +++ ++AE + N IR + P+PG +
Sbjct: 180 TLKGLEKGSLTPVKQREEEASYSPILTKEMGHIDWNKTAEEIRNLIRGMKPWPGCYTFYG 239
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ + ++VE G + G V+ + + C + A++I+ +Q+ G + + I +
Sbjct: 240 D----KMLKIWKGEIVEYNGNEENGTVLKSKGDLIVKCDKDALKIVEIQQEGSKKMGIRE 295
Query: 297 FLLGCPVIIGCIV 309
+L+G + G I
Sbjct: 296 YLIGHNIPEGTIF 308
>gi|226329515|ref|ZP_03805033.1| hypothetical protein PROPEN_03424 [Proteus penneri ATCC 35198]
gi|225202701|gb|EEG85055.1| hypothetical protein PROPEN_03424 [Proteus penneri ATCC 35198]
Length = 321
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 109/316 (34%), Positives = 175/316 (55%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL+S+ H +V + T P +PAG RG K +S V + A +P
Sbjct: 10 SLRIIFAGTPDFAARHLAALLSTQHRVVGILTPPDKPAG-RGKKLTISPVKELALAHDIP 68
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
PT +E +E ++ AD+ +VVAYG+++P+ +L +LG N H SLLPRWRGAA
Sbjct: 69 VYQPTSLKPEENHEWIVAQQADIMIVVAYGMILPKAVLEIPRLGCLNVHGSLLPRWRGAA 128
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD ETG+ IM+MD LDTG + + PI++ +A L ++L+ L A+
Sbjct: 129 PIQRSLWAGDKETGVTIMQMDIGLDTGDMLYKASCPITNEDTSASLYEKLAELGPKALTT 188
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + + Q +N YA+K+SK E ++++ SAE + IRA +P+P ++ +
Sbjct: 189 TLDLITSGKVKAEKQDDNLANYAQKLSKEEAKIDWALSAEQIERCIRAFNPWPMSFFML- 247
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ ++Q + G ++ IA G + I LQ +G R +
Sbjct: 248 ---DGQPVKVWKAQAIADNTNQLAGTLLKADKTGIYIATGNGILNITELQPSGKRPMASA 304
Query: 296 DFLLGCP--VIIGCIV 309
DFL G ++
Sbjct: 305 DFLNSKRDWFTPGKVI 320
>gi|251783088|ref|YP_002997391.1| methionyl-tRNA formyltransferase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242391718|dbj|BAH82177.1| methionyl-tRNA formyltransferase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 311
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 100/316 (31%), Positives = 162/316 (51%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + ++ I++V TQP R G R + ++ V + A +
Sbjct: 1 MT-KLLFMGTPQFSATVLKGLLENPNYEILAVVTQPDRAVG-RKKEIKMTPVKELALAYD 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + L +V A L N HASLLP++RG
Sbjct: 59 LPVYQPNKLSGSQELAELMSLGADGIVTAAFGQFLPTKLLDAVSFAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AIM G+ E G+ IM+M K +D G + PI N L ++L+++ ++
Sbjct: 119 APIHYAIMNGEKEAGVTIMEMVKEMDAGDMVAKASTPILETDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+++ L PQ + T++ IS + ++++ + A V NHIR +SP+P A +
Sbjct: 179 DSLPGYLSGELKPIPQDHSQATFSPNISPEQEQLDWTKPAREVFNHIRGMSPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E+QL EGEG+PGE+I +A QGA+ ++ +Q AG + I D
Sbjct: 239 ----DGQRFKIYEAQLAEGEGQPGEIIAKTKHMLVVAAGQGALSLLVVQPAGKPKMAIAD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G +G
Sbjct: 295 FLNGLGRKLEVGDFIG 310
>gi|103485744|ref|YP_615305.1| methionyl-tRNA formyltransferase [Sphingopyxis alaskensis RB2256]
gi|123253620|sp|Q1GWK0|FMT_SPHAL RecName: Full=Methionyl-tRNA formyltransferase
gi|98975821|gb|ABF51972.1| methionyl-tRNA formyltransferase [Sphingopyxis alaskensis RB2256]
Length = 306
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 126/313 (40%), Positives = 176/313 (56%), Gaps = 14/313 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ FMGT FAV TL AL ++ H I +VY+QPPRPA +RG K S V A+E LP
Sbjct: 1 MRIAFMGTPPFAVPTLAALHTAGHDIAAVYSQPPRPA-QRGKKLQKSPVQLWAEEHGLPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L +E + + DVAVV AYGL++PQ +L+A + G N H S+LPRWRGAAP
Sbjct: 60 RTPKSLKSDEAQAEFAALDLDVAVVAAYGLILPQAVLDAPREGCLNVHGSILPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRAI+AGD ETG+ IM+MD LDTG + + P++ + +
Sbjct: 120 VQRAILAGDAETGVTIMQMDAGLDTGAMRLIETTPVARKSAGLLTHELAEMGALMMRRVL 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
E + P PQ + G+TYA KI K E R++F SA V +RA +P PGA+ E+
Sbjct: 180 S---ELHAFPPVPQPDEGVTYAAKIDKSEARLDFLVSAVQVERQVRAFNPAPGAFFELEG 236
Query: 242 GNKHERIKLLESQLVEGE-----GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
ER K+L +++V PG I+ IAC+ GA+R+ R+QRAG ++ G+
Sbjct: 237 ----ERYKVLAAEVVHPAETVAGAAPGVTIDDRLAIACNPGAIRVTRIQRAGKPAMEAGE 292
Query: 297 FLLGCPVIIGCIV 309
L G + G +
Sbjct: 293 MLRGRGIAKGTRL 305
>gi|222112561|ref|YP_002554825.1| methionyl-tRNA formyltransferase [Acidovorax ebreus TPSY]
gi|254789351|sp|B9MI87|FMT_DIAST RecName: Full=Methionyl-tRNA formyltransferase
gi|221732005|gb|ACM34825.1| methionyl-tRNA formyltransferase [Acidovorax ebreus TPSY]
Length = 323
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 122/321 (38%), Positives = 173/321 (53%), Gaps = 14/321 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT EFA L+ L+++ ++ V TQP RPAG RG+K S V + A + +
Sbjct: 1 MRVIFAGTPEFARVALERLLTAGFTVPLVLTQPDRPAG-RGMKLQASPVKQCALQHGIAV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ + ADV VV AYGL++PQ +LN +LG N HASLL
Sbjct: 60 AQPLSLRLDGKYPEDAAAAKAAIEAAQADVMVVAAYGLILPQWVLNTPRLGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RAI AGD ETG+ IM+MD LDTG + + K IS TA L L+ L
Sbjct: 120 PRWRGAAPIHRAIEAGDAETGVTIMQMDAGLDTGDMLLLEKTAISPADTTATLHDRLAQL 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+VEA++ L +PQ G+TYA KI K E+ +++ + AE + +RA PFP
Sbjct: 180 GGRLIVEALEMAACGGLKPTPQPAEGVTYAHKIDKAESTIDWNQPAEVIARRVRAFDPFP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGA-VRIMRLQRAGG 289
GA + ++S + G++++ +AC G+ +R+ LQRAGG
Sbjct: 240 GAATTLGADAIKVWSCEIDSCSRTLDAACGQILSIDADGIGVACGAGSLLRLTVLQRAGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIVG 310
+ L DFL G P+ G ++G
Sbjct: 300 KRLPAADFLRGFPLAPGMVLG 320
>gi|228922620|ref|ZP_04085920.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228837049|gb|EEM82390.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 308
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 156/308 (50%), Gaps = 8/308 (2%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP-T 66
MGT +F+V L+ L+ + +V V TQP RP G R + V +A++ +P L P
Sbjct: 1 MGTPDFSVPVLRRLIEDGYEVVGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPVLQPLK 59
Query: 67 KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG API AI
Sbjct: 60 IREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAPIHYAI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
M G +TGI IM M + LD G + +V I T L +LS AH + + + L
Sbjct: 120 MEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTVPLLI 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ + +
Sbjct: 180 QGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA--GQVV 237
Query: 247 RIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFLLGCP 302
++ E V + G ++ F +A V+I LQ +G + + FL G
Sbjct: 238 KVWWGEKVPVTKSAEAGTIVVIEEDGFVVATGNETGVKITELQPSGKKRMSCSQFLRGTK 297
Query: 303 VIIGCIVG 310
IG +G
Sbjct: 298 PEIGTKLG 305
>gi|167630202|ref|YP_001680701.1| methionyl-tRNA formyltransferase [Heliobacterium modesticaldum
Ice1]
gi|238687985|sp|B0TGS9|FMT_HELMI RecName: Full=Methionyl-tRNA formyltransferase
gi|167592942|gb|ABZ84690.1| methionyl-tRNA formyltransferase [Heliobacterium modesticaldum
Ice1]
Length = 316
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 103/321 (32%), Positives = 168/321 (52%), Gaps = 18/321 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV TL+A+V++ H + V T+P RP G RG K S V + A LP
Sbjct: 1 MRLVFMGTPDFAVPTLEAIVAAGHEVALVVTRPDRPRG-RGQKPQPSPVKEAALRLGLPV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P L E ++ + VVVA+G ++P R+L+A + N HASLLP++RGAAPI
Sbjct: 60 DHPACLDNEFVQKLKDLGVEAGVVVAFGRILPPRLLDAFPQRWINVHASLLPKYRGAAPI 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
RA++ G+ ETGI M M + LD G + R + I + T + L+ L A +VE +
Sbjct: 120 HRAVIDGEKETGITTMLMSEGLDEGDMLLKRSLAIGPDDTTGQVHDALAELGARLLVETL 179
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+E L PQ + +YA +++ + +V++ AE VHN +R ++P+PGA+
Sbjct: 180 AAMEAGRLQPQPQDGSQASYAPMLARADEQVDWSAPAEAVHNRVRGMNPWPGAFT----M 235
Query: 243 NKHERIKLLESQL-------------VEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGG 289
++ + +K+L +L G+ +++ +A G + ++ AGG
Sbjct: 236 DEGKILKILRGRLRHEGLPLPDPTGSAAHPGEILQIVGDEVAVATGAGVYWLSEVRPAGG 295
Query: 290 RVLDIGDFLLGCPVIIGCIVG 310
+ + G + G + G G
Sbjct: 296 KTMTAGAYARGRRIGPGFRFG 316
>gi|306829014|ref|ZP_07462205.1| methionyl-tRNA formyltransferase [Streptococcus mitis ATCC 6249]
gi|304428819|gb|EFM31908.1| methionyl-tRNA formyltransferase [Streptococcus mitis ATCC 6249]
Length = 311
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT EF+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPEFSATVLKGLLSDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + +V A L + N HASLLP+ RG
Sbjct: 59 LPIYQPEKLSGSPELEAIMNLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLAIVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPGYLAGEIQPEPQDPSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGDPGEILSIGKKELIVAAAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|261878704|ref|ZP_06005131.1| methionyl-tRNA formyltransferase [Prevotella bergensis DSM 17361]
gi|270334711|gb|EFA45497.1| methionyl-tRNA formyltransferase [Prevotella bergensis DSM 17361]
Length = 326
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 96/313 (30%), Positives = 150/313 (47%), Gaps = 13/313 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT EFAVATL L+ + +V+V TQP +P GR + AV A E +P
Sbjct: 6 LRIVFMGTPEFAVATLSKLIREEYHVVAVVTQPDKPVGRHQNRLQPPAVKTFALEHGIPV 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P K+ ++ Q LS VV ++P+ + + G +N HA+LLP++RGAAPI
Sbjct: 66 LQPAKMKDPDFVQELSAYQADLQVVVAFRMLPEVVWGMPRFGTFNVHAALLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AIM G+ ETG+ +DK +DTG + + PI + + + L L A A E +
Sbjct: 126 NWAIMNGETETGVTTFFLDKDIDTGRIILQKHFPIPDDADAEYVYNGLMELGAEAACETI 185
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKG-------ETRVNFCRSAENVHNHIRALSPFPGA 235
+ + ++ + + R+++ R A++V + IR LSP+P A
Sbjct: 186 NLVIEHEGNVPSTDQAEWENQHATLHPAPKIFKETCRIDWNRPAKSVFDFIRGLSPYPAA 245
Query: 236 WLEMM-IGNKHERIKLLESQ---LVEGEGKPGEVINPN--FTIACSQGAVRIMRLQRAGG 289
W + N+ +K+ ++ PG + IAC + I LQ +G
Sbjct: 246 WTMLQPTDNQPAMLKVYKASKTGKSCHGATPGNIFVDRFQLYIACQDEWLEITELQLSGK 305
Query: 290 RVLDIGDFLLGCP 302
+ + DFL G
Sbjct: 306 KRMPARDFLNGNK 318
>gi|171909788|ref|ZP_02925258.1| methionyl-tRNA formyltransferase [Verrucomicrobium spinosum DSM
4136]
Length = 314
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 101/314 (32%), Positives = 173/314 (55%), Gaps = 8/314 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF+GT + + +L+ L+++ SH +V+V TQP +P G R AV +A E +P
Sbjct: 1 MRIVFLGTGDIGLPSLEHLLTATSHEVVAVVTQPDKPVG-RKQVLTPPAVKVRALEAGIP 59
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + E + ADV VVVAYG ++ +++L+ +L N HAS+LPR RGA+
Sbjct: 60 VLQPQRLRTAENVAALAEYQADVFVVVAYGQILSRQVLDLPRLACLNIHASILPRHRGAS 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI GD E+G+ IM MD+ LDTGP+ ++ + L L+ L ++ +
Sbjct: 120 PIQAAIREGDAESGVTIMWMDEGLDTGPILLQDCFSLNPDETGGSLHDRLAQLAPSSLDK 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ +E P PQ + T+ +K+ + + +++ R E + IRA P+PG + +
Sbjct: 180 ALALIEAGTAPKIPQNNDLSTHCKKLEREDGHLDWQRPVEELERLIRAYQPWPGTFSRLP 239
Query: 241 IGNKHERIKLLESQLVEGEGK---PG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+G+K ++K+L +Q+ + PG ++ ++C GA+ ++ +Q G + + G
Sbjct: 240 VGDKLLQLKVLRAQVADASSTTVDPGALQIAQGRLFVSCGDGALELLGVQLEGRKPMPAG 299
Query: 296 DFLLGCPVIIGCIV 309
DFL G + G I+
Sbjct: 300 DFLRGQGALEGVIL 313
>gi|163795437|ref|ZP_02189404.1| Methionyl-tRNA formyltransferase [alpha proteobacterium BAL199]
gi|159179423|gb|EDP63954.1| Methionyl-tRNA formyltransferase [alpha proteobacterium BAL199]
Length = 318
Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats.
Identities = 138/313 (44%), Positives = 186/313 (59%), Gaps = 9/313 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+ F+G+ +FAV TL+AL+ + H +V VY QPPRPAG RG + VH A+ +
Sbjct: 11 PLRIAFLGSPDFAVPTLRALIDAGHDVVCVYAQPPRPAG-RGKHDRPTPVHSAAESVGIE 69
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + F + + DVAVVVAYGL++P IL A +LG N HASLLPRWRGAA
Sbjct: 70 VRTPRTLRDPDAQAAFAALDLDVAVVVAYGLILPPAILTAPRLGCVNVHASLLPRWRGAA 129
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI+AGD ETG+ IM+MD+ LDTG + VPI + + L LS L A ++V
Sbjct: 130 PIQRAILAGDRETGVTIMQMDEGLDTGAMLLHCPVPIEPDTTASHLHDTLSALGAESIVP 189
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ LE L PQ E G+TYA+K+ + E R++F R A ++ IRA P+PGA+ ++
Sbjct: 190 ALAGLESGTLTPVPQPEMGVTYAKKLERDEGRLDFGRPAADLERQIRAFDPWPGAFFDLG 249
Query: 241 IGNKHERIKLLESQLV---EGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
ER K+L +Q++ PG V++ TIAC A+R R+QRAG +
Sbjct: 250 G----ERFKVLSAQVLTIGALANAPGTVLDHELTIACGVDALRPTRIQRAGKAPMATEAL 305
Query: 298 LLGCPVIIGCIVG 310
L G PV G IVG
Sbjct: 306 LRGFPVAPGVIVG 318
>gi|291543911|emb|CBL17020.1| methionyl-tRNA formyltransferase [Ruminococcus sp. 18P13]
Length = 317
Score = 179 bits (454), Expect = 5e-43, Method: Composition-based stats.
Identities = 114/318 (35%), Positives = 162/318 (50%), Gaps = 19/318 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L +VFMGT +F+V L AL S H + +V+TQP +P G RG K + + V AQ + +P
Sbjct: 4 KLNIVFMGTPDFSVPCLHALAKSGHRVQAVFTQPDKPKG-RGYKLIPTPVKAAAQAYGIP 62
Query: 62 ALVPTKLGQEEYEQF-----LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P L + E + D+ VVVAYG ++P +L G N HASLLP++
Sbjct: 63 VYQPLSLRKGEDAARALETLQALQPDLIVVVAYGQILPVEVLELPAFGCVNIHASLLPKY 122
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQ I+ G+ ETG+ M+M + LDTG + + I + L LS L A
Sbjct: 123 RGAAPIQWCILNGETETGVTSMQMAQGLDTGDMLLAESLSIGEEETSGQLHDRLSELGAK 182
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
++E + + Q L PQ + YA I K +R++F +SA +HN IR ++ F
Sbjct: 183 VLLETVAGICQGTLTPVPQDDALSCYASMIRKDMSRIDFTKSAREIHNLIRGITGF---- 238
Query: 237 LEMMIGNKHERIKLLESQLVEGEGKP---GEVIN-PNFTIACSQG-AVRIMRLQRAGGRV 291
+R KLL S L E P G +++ + TIAC G +RI+ LQ GG+
Sbjct: 239 ----AFLGGKRHKLLRSALSERTVDPALAGTIVDAKDLTIACGDGHCIRILELQAEGGKR 294
Query: 292 LDIGDFLLGCPVIIGCIV 309
L DFL G + G
Sbjct: 295 LKTEDFLRGNSIENGMKF 312
>gi|238019377|ref|ZP_04599803.1| hypothetical protein VEIDISOL_01241 [Veillonella dispar ATCC 17748]
gi|237864076|gb|EEP65366.1| hypothetical protein VEIDISOL_01241 [Veillonella dispar ATCC 17748]
Length = 325
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 93/327 (28%), Positives = 158/327 (48%), Gaps = 29/327 (8%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +F+V TL+AL+ + HSIV VY QP + G RG + + V A + +LP P
Sbjct: 1 MGTPDFSVPTLEALIKAGHSIVGVYCQPDKQKG-RGKQVQMPPVKVAALKHNLPVFQPVT 59
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
++ + + DV VV+AYG ++P ++ + G N HAS+LP++RGAAPI AI
Sbjct: 60 LRDEQVQAELEALQPDVVVVIAYGKILPPWLIRLPQYGCINVHASILPKYRGAAPIHYAI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ GD +TG+ IM MD LDTG + + + I T L + ++VL +V + +
Sbjct: 120 LNGDTKTGVTIMHMDDGLDTGDIIDIVETDILPGETTGQLFERMAVLGGETIVPVLTRWV 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ PQ + T+ KI+K +++ + A + N IR L+P PG + + +
Sbjct: 180 NGEIVAIPQDDTMATHTAKITKEMGHIDWSKPANEIVNLIRGLNPTPGCYTYL----DGK 235
Query: 247 RIKLLESQLVEGEGK--------------------PGEVINP--NFTIACSQG-AVRIMR 283
R+K+ ++V + PG +++ + C G + +
Sbjct: 236 RLKVWSGEVVPSDTTHCLIDVHGKHVPIAISATTVPGTIVSKTAGLGVFCGDGNILLLTE 295
Query: 284 LQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+Q + + DF+ G + G + G
Sbjct: 296 VQPENKKRISATDFINGHQIKEGIVFG 322
>gi|148989396|ref|ZP_01820764.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP6-BS73]
gi|237649148|ref|ZP_04523400.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae CCRI
1974]
gi|237820736|ref|ZP_04596581.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae CCRI
1974M2]
gi|147925146|gb|EDK76226.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP6-BS73]
Length = 311
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL + L +V A L + N HASLLPR RG
Sbjct: 59 LSIYQPEKLSGSPEMEDLMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGCDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGDIKPEPQDTSQVTFSPNIKPKEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|15858852|gb|AAK13241.1| formyltransferase Fmt [Streptococcus pneumoniae]
Length = 311
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL + L +V A L + N HASLLPR RG
Sbjct: 59 LSIYQPEKLSGSPEMEDLMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGCDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGDIKPEPQDTSQVTFSPNIKPKEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSICKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|332139429|ref|YP_004425167.1| methionyl-tRNA formyltransferase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549451|gb|AEA96169.1| methionyl-tRNA formyltransferase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 316
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 119/304 (39%), Positives = 183/304 (60%), Gaps = 13/304 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+V+F GT +FA L AL+ S H +++VYTQP RPAG RG K S V A+E ++P
Sbjct: 4 PLKVIFAGTPDFAAKHLSALLESEHEVIAVYTQPDRPAG-RGKKLTASPVKVLAEENAIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L ++ ++ L+ D+ VVVAYGL++P +LNA KLG N H S+LP+WRGAA
Sbjct: 63 VYQPQSLKAQDAQEELASLNADLMVVVAYGLILPTAVLNAPKLGCINVHGSILPKWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD+ LDTG + + +PI+++ +A + ++L+ L A+V+
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDEGLDTGDMLHIATLPIANDDTSATMYEKLATLGPKALVD 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ E + + Q + TYA K+SK E +++ A+ + +IRA +P+P AW+++
Sbjct: 183 VVNDFE--SYTPTKQDDTQATYANKLSKEEALISWSDDAKQIERNIRAFNPWPVAWMQVE 240
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
N +K+ + +V + KPG VI TIA + A+RI LQ G + L
Sbjct: 241 DQN----VKVWSADVVTLDKNVKPGTVISADKAGITIATGRDALRITSLQIPGKKALPAA 296
Query: 296 DFLL 299
D +
Sbjct: 297 DVIN 300
>gi|182677493|ref|YP_001831639.1| methionyl-tRNA formyltransferase [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633376|gb|ACB94150.1| methionyl-tRNA formyltransferase [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 317
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 136/308 (44%), Positives = 193/308 (62%), Gaps = 6/308 (1%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT F+V L AL+ + H + +VYT+ PRPAGRRGL S VH AQ+ LP P
Sbjct: 1 MGTPVFSVPVLNALIEAGHQVAAVYTRAPRPAGRRGLDLTPSPVHLAAQQHDLPVETPKS 60
Query: 68 LGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
L EE ++ DV VVVAYGL++P+ IL+ G N HASLLPRWRGAAPIQRAI
Sbjct: 61 LRSEEALATLRAYAPDVLVVVAYGLILPKAILDVPPFGALNLHASLLPRWRGAAPIQRAI 120
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
MAGD+++GI +M+M++ LDTGPV + +V I ++ L LS+ A ++E + KLE
Sbjct: 121 MAGDSQSGIELMRMEEGLDTGPVGLVGEVTIGPDMTGGELHDLLSLRAATLIIEGLQKLE 180
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
L +PQ E+G+ YA+KI K E R+++ R A V+N IRALSPFPGA+ E+ +G E
Sbjct: 181 AGTLTFTPQTEDGVIYAKKIEKVEARIDWRRPAHEVYNLIRALSPFPGAFFEVDLGKGLE 240
Query: 247 RIKLLESQLVEG-EGKPGEVINPNFTIACSQ----GAVRIMRLQRAGGRVLDIGDFLLGC 301
RIK+L ++L +PGE+++ +IAC + GA++++ +QR+G + FL G
Sbjct: 241 RIKILRAELTHTPAAQPGEILDAGLSIACGEGEGSGAIKLLDIQRSGKAPMSAEAFLRGT 300
Query: 302 PVIIGCIV 309
+ +
Sbjct: 301 KLPASTRL 308
>gi|169831744|ref|YP_001717726.1| methionyl-tRNA formyltransferase [Candidatus Desulforudis
audaxviator MP104C]
gi|169638588|gb|ACA60094.1| methionyl-tRNA formyltransferase [Candidatus Desulforudis
audaxviator MP104C]
Length = 359
Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats.
Identities = 110/313 (35%), Positives = 165/313 (52%), Gaps = 12/313 (3%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
+VFMGT +FAV +L+ALV S ++ V TQP RP G RG K V A + L L
Sbjct: 9 LVFMGTPDFAVPSLRALVESEFRVLRVVTQPDRPRG-RGNKLAPGPVKAYALKQGLEILQ 67
Query: 65 PTKLGQEEYEQ-FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P + + D VVVA+G ++P +L+ +LG N HASLLPR+RGAAPI
Sbjct: 68 PMNIRDHVFVDLIRELRPDFIVVVAFGRILPGMVLDIPRLGCVNVHASLLPRYRGAAPIH 127
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
A+M G+ ETG+ M MD+ LDTG + K I + N + L+ L A +V +D
Sbjct: 128 WAVMNGEPETGVTTMLMDEGLDTGDILLQEKTAIGPDDNFGVVHDRLAELGAVLLVRTLD 187
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+L L PQ E+ TYA + + +++ R+AE + N +R L P+PGA +
Sbjct: 188 RLTAGELVPRPQDESRATYAPPLRREHEVIDWTRTAEEIKNQVRGLDPWPGAHTMLNGR- 246
Query: 244 KHERIKLLESQLV--EGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+K+ +++ G+PG+V+ ++ GAVR++ +Q AG R + DF
Sbjct: 247 ---VLKVWRAEIAGDRDGGRPGQVLLADPVRGLVVSTGAGAVRLLEVQPAGRRRVRAEDF 303
Query: 298 LLGCPVIIGCIVG 310
L G + G ++G
Sbjct: 304 LRGYRMPAGTLLG 316
>gi|300867029|ref|ZP_07111698.1| Methionyl-tRNA formyltransferase [Oscillatoria sp. PCC 6506]
gi|300334967|emb|CBN56864.1| Methionyl-tRNA formyltransferase [Oscillatoria sp. PCC 6506]
Length = 340
Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 102/332 (30%), Positives = 161/332 (48%), Gaps = 25/332 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT +FAV +L+ L++ +V+V TQP + G RG + + S V A +LP
Sbjct: 1 MKIVFFGTPQFAVPSLENLLNHPDFEVVAVVTQPDKRRG-RGNQLIPSPVKITAVAHNLP 59
Query: 62 ALVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ ++ AD+ +VVAYG ++ Q IL+ +LG N H S+LP++RGA
Sbjct: 60 VWQPQRIKKDTETLSLLKQTEADLFIVVAYGQILSQEILDMPQLGCINAHGSILPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ + G+ ETGI M MD +DTG + I+ N A L + LS L A +V
Sbjct: 120 APIQWCLYHGEKETGITTMLMDAGMDTGAMLLKAFAGITLLDNAATLAERLSELGADLLV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE- 238
E + KL ++ + PQ + TYA I + +++ +SA +HN IR P
Sbjct: 180 ETVLKLGKDEVKAIPQDASEATYAPLIKNPDYVLDWSQSAIALHNQIRGFFPDCVTSFRG 239
Query: 239 ----------------MMIGNKHERIKLLESQLVEGEGKPGEVINP----NFTIACSQGA 278
+ + R++ S L E GK GEV+ + +G
Sbjct: 240 NSAKISATAPLGSEYWLKLPPDLRRLEQDWSSLSELSGKCGEVVKVVKNLGPIVQTGEGL 299
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ + +Q AG +V DF G + +G + G
Sbjct: 300 LLLREVQLAGKKVQSGWDFANGTRLAVGEVFG 331
>gi|119509940|ref|ZP_01629082.1| methionyl-tRNA formyltransferase [Nodularia spumigena CCY9414]
gi|119465406|gb|EAW46301.1| methionyl-tRNA formyltransferase [Nodularia spumigena CCY9414]
Length = 333
Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 106/332 (31%), Positives = 159/332 (47%), Gaps = 25/332 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT +FAV TL+ L++ +++V TQP + RG K + S V A +LP
Sbjct: 1 MKIVFFGTPDFAVPTLEKLLNQPDFQVLAVVTQPDKRR-ERGNKLIPSPVKTVAINHNLP 59
Query: 62 ALVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ ++ Q +ADV VVVAYG ++ IL+ KLG N H S+LP++RGA
Sbjct: 60 VWQPQRIKKDTETLTQLRECDADVFVVVAYGQILSPEILDMPKLGCVNVHGSILPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ + G+ ETGI M MD +DTG + PI+ N L Q L V+ +V
Sbjct: 120 APIQWCLYNGETETGITTMLMDAGMDTGAMLLKATTPIALLDNAQDLAQRLCVIGGDLLV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KLE + PQ E TYA I K +++ +SA +HN IR P A
Sbjct: 180 ETLFKLENREIAPVPQDEAEATYAPLIQKHNYTLDWSKSAIQLHNQIRGFYPNCTATFRD 239
Query: 240 MIGNKHERIKLLES-----------------QLVEGEGKPGEVINPNFTIA----CSQGA 278
+ L ++ +L G PG+V++ I +G
Sbjct: 240 QGIKIIASVPLGDAYGYEPTPELTEIYQKLPELSTISGSPGQVVSIAKGIGAIAQTGEGL 299
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ + +Q AG R DF+ G + +G + G
Sbjct: 300 LLLREVQLAGKRPQSGWDFVNGNRLTVGEVFG 331
>gi|120552985|ref|YP_957336.1| methionyl-tRNA formyltransferase [Marinobacter aquaeolei VT8]
gi|259646041|sp|A1TWN0|FMT_MARAV RecName: Full=Methionyl-tRNA formyltransferase
gi|120322834|gb|ABM17149.1| methionyl-tRNA formyltransferase [Marinobacter aquaeolei VT8]
Length = 311
Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 123/315 (39%), Positives = 181/315 (57%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT +FA L+ L+++ + IV VYTQP RPAG RG K + S V + A + +P
Sbjct: 1 MRIVFAGTPDFAATALKTLLNAGYDIVGVYTQPDRPAG-RGRKLMPSPVKQVALDTGIPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L EE +Q L+ DV +V AYGL++P+ +LN G N HASLLPRWRGAAP
Sbjct: 60 YQPVSLKPEEAQQELASLQPDVMIVAAYGLILPKAVLNIPTHGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETGI IM+MD+ LDTG + PIS++ L L+ + A+V+A
Sbjct: 120 IQRAIAAGDAETGITIMQMDEGLDTGDMLLKLDTPISADDTGGSLHDRLAEMGGKAIVQA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
M++L + +L Q E YA K+SK E +++ RSA+ + IRA +P+PG + ++
Sbjct: 180 MERLAKGDLTGEVQNEAEANYAHKLSKEEGHIDWSRSAQEIERLIRAFNPWPGTFTDLGE 239
Query: 242 GNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+RI++ ++ ++ + PG VI +AC G +RI Q G + I D
Sbjct: 240 ----QRIRIHQASALKQGSDKGPGTVIARERDGVDVACGTGTLRITSAQLPGSKAQSIND 295
Query: 297 FLLGCP--VIIGCIV 309
+ G ++ G +
Sbjct: 296 LINGGKQVLLPGQEL 310
>gi|157373175|ref|YP_001471775.1| methionyl-tRNA formyltransferase [Shewanella sediminis HAW-EB3]
gi|189044557|sp|A8FP74|FMT_SHESH RecName: Full=Methionyl-tRNA formyltransferase
gi|157315549|gb|ABV34647.1| methionyl-tRNA formyltransferase [Shewanella sediminis HAW-EB3]
Length = 329
Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 118/314 (37%), Positives = 173/314 (55%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL+ S H+I+ VY+QP RPAG RG K S V A E +LP
Sbjct: 3 PLNIIFAGTPDFAARHLQALIDSEHNIIGVYSQPDRPAG-RGKKLQASPVKSLAIEHNLP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E+ + L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 62 VFQPKSLRDEQAQAELANLNADIMVVVAYGLILPKVVLDTPKLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ IM+MD LDTG + ++PI N +A L ++L++ A++E
Sbjct: 122 PIQRALWAGDTETGVTIMQMDIGLDTGDMLLKTRLPIEDNDTSASLYEKLALQGPDALIE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L + L Q E+ YAEK+SK E +++ +SA + IRA +P+P +
Sbjct: 182 ALTGLAKGELTAEKQDESLANYAEKLSKEEAELDWSKSALELWREIRAFNPWPISHFTHQ 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R + + G +I IA G + ++ +Q G + L +GD
Sbjct: 242 DASIKVRESA--VSNLSSDAPAGTIISAGKQGIDIATGDGVLTLLNMQLPGKKPLSVGDI 299
Query: 298 LL--GCPVIIGCIV 309
L G G ++
Sbjct: 300 LNSRGEWFTPGTLL 313
>gi|332531651|ref|ZP_08407548.1| methionyl-tRNA formyltransferase [Hylemonella gracilis ATCC 19624]
gi|332039014|gb|EGI75443.1| methionyl-tRNA formyltransferase [Hylemonella gracilis ATCC 19624]
Length = 352
Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 124/349 (35%), Positives = 171/349 (48%), Gaps = 42/349 (12%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV+ GT EFA A LQAL ++ H I V TQP RPAG RG+K S V + A E +
Sbjct: 1 MRVVYAGTPEFARAALQALHAAGHEIALVLTQPDRPAG-RGMKLQASPVKQFALEHGIAV 59
Query: 63 LVPTKLGQEEYEQFLSFN---------------------------ADVAVVVAYGLVIPQ 95
P L + + D++ +
Sbjct: 60 AQPRSLRLDGKFPDDAAAARTALEAAKANVMVVAAYGLILPQWVLDDMSSALEGSEPRSA 119
Query: 96 RILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKV 155
+ K G N HASLLPRWRGAAPI RAI AGD ETG+ IM+MD LDTG + M ++
Sbjct: 120 GSVGGQKFGCLNIHASLLPRWRGAAPIHRAIEAGDRETGVTIMQMDAGLDTGDMLLMDRL 179
Query: 156 PISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNF 215
PI+ + +T L +L+ L +V ++ + L +PQ E G+TYA KI K E +++
Sbjct: 180 PIAQDDSTGTLHDKLAALGGELIVRSLALAQGGELRATPQPEQGVTYAHKIDKAEAHIDW 239
Query: 216 CRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGK-----------PGE 264
+ AE + IRA +P PGA + + E +KL ++Q E PG
Sbjct: 240 SQPAELIARRIRAFNPAPGAQTLLDGEHGGEVLKLWQAQAAEASHATDAPGTSAPSLPGL 299
Query: 265 VI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
V+ T+ C QG + I LQRAGG+ L DFL G P+ IG ++G
Sbjct: 300 VLALGAEGITVQCGQGQLLITELQRAGGKRLAAADFLRGTPLRIGALLG 348
>gi|312863454|ref|ZP_07723692.1| methionyl-tRNA formyltransferase [Streptococcus vestibularis F0396]
gi|311100990|gb|EFQ59195.1| methionyl-tRNA formyltransferase [Streptococcus vestibularis F0396]
Length = 311
Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 101/316 (31%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT ++VFMGT F+ L+ L+ + IV+V TQP R G R + ++ V + A
Sbjct: 1 MT-KIVFMGTPAFSATVLEGLLTDERYDIVAVVTQPDRAVG-RKKEIRMTPVKEVALAHD 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL E L +V A L + N HASLLP++RG
Sbjct: 59 LPIYQPEKLSGSEEMAQLMSLGADGIVTAAYGQFLPSKLLDSMDFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ GD E G+ IM+M K +D G + + +PI N + ++L+VL ++
Sbjct: 119 APIHYAIINGDAEAGVTIMEMVKEMDAGDMVSQKALPILDQDNVGTMFEKLAVLGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + PQ + +T++ IS E R+++ +SA ++ N IR + P+P A +
Sbjct: 179 ETLPAYIAGEIKPVPQDASQVTFSPNISPEEERLDWNKSARDIFNQIRGMYPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E LVEG+G+ G +I + +A QGA+ + +Q AG + I D
Sbjct: 239 ----DGKRFKIYEGDLVEGQGQAGHIIEKTKKSLVVATGQGAISLKSVQPAGKPRMAIAD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRNLEVGDAFG 310
>gi|260911832|ref|ZP_05918399.1| methionyl-tRNA formyltransferase [Prevotella sp. oral taxon 472
str. F0295]
gi|260634043|gb|EEX52166.1| methionyl-tRNA formyltransferase [Prevotella sp. oral taxon 472
str. F0295]
Length = 342
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 93/313 (29%), Positives = 162/313 (51%), Gaps = 14/313 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR++FMGT EFAV +L+ LV +++V+V TQP +P GR G V + A S+P
Sbjct: 21 LRIIFMGTPEFAVPSLKQLVEGGYNVVAVVTQPDKPVGRHGSTLQAPPVKQYALSKSIPV 80
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P ++ E + L VV ++P+++ N G +N HA+LLP++RGAAPI
Sbjct: 81 LQPERMKDESFLSQLHAFNAHLQVVVAFRMLPKQVWNLPPFGTFNVHAALLPQYRGAAPI 140
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ ETG+ +D+ +DTG + +++ I + N + L L A +E +
Sbjct: 141 NWAVINGETETGVTTFFLDEDIDTGRIIDHKRLAIPDDANVEWVYDHLMHLGAELCIETV 200
Query: 183 DKLEQNNLP----LSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
D++ Q + PQ + + +A KI K ++++ + A+ +++ IR LSP+PGAW E
Sbjct: 201 DRILQYDGKVETTEQPQDQ-PLKHAPKIFKETCQIDWNQPAKRIYDFIRGLSPYPGAWTE 259
Query: 239 MM-----IGNKHERIKLLESQL--VEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGG 289
+ NK + +K+ + + +PG + + + + + +Q AG
Sbjct: 260 IQKEGTDADNKPQVLKIFSTTKTQIPANAQPGTFVVEGNRLFVNTADNLLELQEIQLAGK 319
Query: 290 RVLDIGDFLLGCP 302
+ + DFL G
Sbjct: 320 KRMASRDFLNGTR 332
>gi|153802786|ref|ZP_01957372.1| methionyl-tRNA formyltransferase [Vibrio cholerae MZO-3]
gi|124121699|gb|EAY40442.1| methionyl-tRNA formyltransferase [Vibrio cholerae MZO-3]
Length = 315
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 117/314 (37%), Positives = 175/314 (55%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAG-RGKKLTASPVKTLALEHNVP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ IM+MD LDTG + + +PI ++ +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ Q Q + YA K+SK E R+N+ A ++ IRA +P+P + E+
Sbjct: 183 CLQEIAQGTAVAVKQDDALANYAHKLSKEEARINWNDEAAHIERCIRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E++ V PG +I +A Q + + LQ G + L + D
Sbjct: 243 ENSIKVWQARVETRAV--TQTPGTIIQADKSGIYVATGQDVLVLESLQIPGKKALPVQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNARADWFSVGSQL 314
>gi|227080282|ref|YP_002808833.1| methionyl-tRNA formyltransferase [Vibrio cholerae M66-2]
gi|298501228|ref|ZP_07011027.1| methionyl-tRNA formyltransferase [Vibrio cholerae MAK 757]
gi|254789379|sp|C3LPB8|FMT_VIBCM RecName: Full=Methionyl-tRNA formyltransferase
gi|227008170|gb|ACP04382.1| methionyl-tRNA formyltransferase [Vibrio cholerae M66-2]
gi|297540100|gb|EFH76162.1| methionyl-tRNA formyltransferase [Vibrio cholerae MAK 757]
Length = 315
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 117/314 (37%), Positives = 175/314 (55%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAG-RGKKLTASPVKTLALEHNVP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ IM+MD LDTG + + +PI ++ +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ Q Q + YA K+SK E R+N+ A ++ IRA +P+P + E+
Sbjct: 183 CLQEIAQGTAVAVKQDDALANYAHKLSKEEARINWNDEAAHIERCIRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E++ V PG +I +A Q + + LQ G + L + D
Sbjct: 243 ENSIKVWQARVETRAV--TQTPGTIIQADKSGIYVATGQDVLVLESLQIPGKKALPVQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNARADWFSVGSQL 314
>gi|228477335|ref|ZP_04061973.1| methionyl-tRNA formyltransferase [Streptococcus salivarius SK126]
gi|228251354|gb|EEK10525.1| methionyl-tRNA formyltransferase [Streptococcus salivarius SK126]
Length = 311
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 99/316 (31%), Positives = 156/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT ++VFMGT F+ L+ L+ + IV+V TQP R G R + ++ V + A
Sbjct: 1 MT-KLVFMGTPAFSATVLEGLLTDEHYDIVAVVTQPDRAVG-RKKEIRMTPVKEVALAHD 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL E L +V A L + N HASLLP++RG
Sbjct: 59 LPIYQPEKLSGSEEMAQLMALGADGIVTAAYGQFLPSKLLDSMDFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ GD E G+ IM+M K +D G + + +PI N + ++L+VL ++
Sbjct: 119 APIHYAIINGDAEAGVTIMEMVKEMDAGDMVSQKALPILDEDNVGTMFEKLAVLGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + PQ + +T++ IS E R+++ + A ++ N IR + P+P A +
Sbjct: 179 ETLPAYIAGEIKPVPQDASQVTFSPNISPEEERLDWNKPARDIFNQIRGMYPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E+ L EG+G+ G +I + +A QGA+ + +Q AG + I D
Sbjct: 239 ----DGKRFKIYEADLAEGQGQAGHIIEKTKKSLVVATGQGAISLKTVQPAGKPRMAIAD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRNLEVGDAFG 310
>gi|332799421|ref|YP_004460920.1| methionyl-tRNA formyltransferase [Tepidanaerobacter sp. Re1]
gi|332697156|gb|AEE91613.1| Methionyl-tRNA formyltransferase [Tepidanaerobacter sp. Re1]
Length = 312
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 99/314 (31%), Positives = 171/314 (54%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMGT EFAV L+ L+ + ++V+V TQP RP G R + K A ++ +P
Sbjct: 1 MKVIFMGTPEFAVVPLEMLIKENINVVAVVTQPDRPVG-RKRVITPPPIKKLAVQYDIPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ +E + ++ D+ VVA+G ++PQR+L K+G N HASLLP++RGAAP
Sbjct: 60 YQPEKVKEEHFIDTLIALEPDIITVVAFGQILPQRVLKIPKIGCINVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ +I+ G++ TG+ M MD+ LDTG + ++ I ++ + L +ELS L + +++
Sbjct: 120 IQWSIINGESITGVTTMWMDEGLDTGDIFLQEQIAIKNDWTSEDLSRELSYLGGNLLLKT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ NL Q TYA + K + ++N+ ++ ++N IR P+PG++
Sbjct: 180 LSCIKSGNLIRKSQNHEESTYAPLLKKEDGKINWLKNTNEIYNLIRGTYPWPGSYT---- 235
Query: 242 GNKHERIKLLESQLVEG--EGKPGE----VINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
IK+ +++ + PG V N F + G++ I+ LQ AG + L
Sbjct: 236 IRNGREIKIWKAKPYSAGIKSHPGRFMGLVKNEGFLVGTGDGSILILELQEAGKKRLKAT 295
Query: 296 DFLLGCPVIIGCIV 309
++L+G + G
Sbjct: 296 EYLVGHDIKEGEFF 309
>gi|288924801|ref|ZP_06418738.1| methionyl-tRNA formyltransferase [Prevotella buccae D17]
gi|288338588|gb|EFC76937.1| methionyl-tRNA formyltransferase [Prevotella buccae D17]
Length = 322
Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 152/313 (48%), Gaps = 14/313 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR++FMGT EFAV TL+ L ++IV+V TQP RP GR S V K A LP
Sbjct: 6 LRIIFMGTPEFAVGTLKRLYEDGYNIVAVVTQPDRPVGRHQDTLQPSEVKKYALAHGLPI 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P K+ + + L+ +V ++P+ + + + G +N HA+LLP++RGAAPI
Sbjct: 66 LQPEKMKDPTFIEQLASYKADLQIVVAFRMLPEVVWSRPRFGTFNVHAALLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ ETG+ ++K +DTG + R PI + + + L L A VE +
Sbjct: 126 NWAIINGETETGVTTFFLNKDIDTGRIILQRHFPIPDDADVEYVYNGLMELGAQTAVETV 185
Query: 183 DK----------LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
D+ Q + + A KI K R+N+ R A+ V++ +R LSP+
Sbjct: 186 DRLLAGNGTVASTAQAEWLDHNVPTDTLHTAPKIFKETCRINWNRPAKRVYDFVRGLSPY 245
Query: 233 PGAWLEMMIGNKHERIKLLES--QLVEGEGKPGEVINPN--FTIACSQGAVRIMRLQRAG 288
PG+W + + +K+ ++ PG V IAC + I LQ AG
Sbjct: 246 PGSWTDNVSFPTKAPLKIFKTGKTGEATAATPGTVHQEGKRLLIACRDEWLEIFELQMAG 305
Query: 289 GRVLDIGDFLLGC 301
+ + DFL G
Sbjct: 306 KKRMAAKDFLNGF 318
>gi|295100692|emb|CBK98237.1| methionyl-tRNA formyltransferase [Faecalibacterium prausnitzii
L2-6]
Length = 306
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 96/310 (30%), Positives = 161/310 (51%), Gaps = 7/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT + A L+AL + H I VYT+ +P G R V + A P
Sbjct: 1 MRILFMGTPDIAADCLKALYEAGHDICGVYTRRDKPVG-RKQVLTAPPVKEVALAHGTPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E E + ++ VVVAYG ++P+ +L A K G N H SLLP++RG+AP
Sbjct: 60 FQPRTLRDGGEDENIRALAPELIVVVAYGCILPKSVLEAPKYGCINLHVSLLPKYRGSAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A++ GD ETG++IM+MD+ LDTG V ++ I + L ++ + A + E
Sbjct: 120 VQWAVLNGDAETGVSIMQMDEGLDTGDVLACERIAIDPEETSGQLFDRVTAVGARVLCET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + L PQ + A +SK + SA+++HN +R ++P+PGAW +
Sbjct: 180 LPAIAAGTLRAEPQARENASTAPMLSKEMAQFQLTDSADHIHNWVRGMNPWPGAWF---V 236
Query: 242 GNKHERIKLLESQLVEGEGK-PGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
++K++E ++ E G+ G V+ T+AC +GA++++ + G + +D F
Sbjct: 237 TAGGRKVKVMECRVAESHGEAAGTVLATKPLTVACGEGAIQLLHVVPEGKKPMDGTSFAA 296
Query: 300 GCPVIIGCIV 309
G + G +
Sbjct: 297 GLRLKAGDSL 306
>gi|241762298|ref|ZP_04760379.1| methionyl-tRNA formyltransferase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|241373201|gb|EER62831.1| methionyl-tRNA formyltransferase [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 308
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 118/308 (38%), Positives = 172/308 (55%), Gaps = 9/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT +FA+ TL ALV + H IV+VY+QP RPAG RG S V K+A+E L
Sbjct: 8 MKIIFMGTPDFALPTLNALVDAGHEIVAVYSQPARPAG-RGKAPRPSPVEKRARELGLNV 66
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E + F ADVAVV AYGL++P+ IL +LG N H SLLP+WRGAAP
Sbjct: 67 YTPVSLKEAETQKIFADHQADVAVVAAYGLLLPKAILEMPRLGCLNVHGSLLPKWRGAAP 126
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRAI+AGD E+G+ IM+MD+ LDTG + + K PI+ A + + +
Sbjct: 127 VQRAILAGDQESGVTIMQMDRGLDTGAMLKIEKTPIADKNAGALSDEIAHIGAKLMVEVL 186
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ P Q E+G +YA KI K E ++F + A IRA +P PGA+
Sbjct: 187 AQPEQ---YPPVKQPESGESYAAKIDKSEALIDFSKGAVQTERQIRAFAPKPGAFFLY-- 241
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ERI++LE+ + G GE ++ + I C +++ + +QRAG + + + D L G
Sbjct: 242 --NEERIRILEAHVQNQAGAVGETLDDHLLIGCGSDSLQPVIVQRAGRKAMKLEDMLRGF 299
Query: 302 PVIIGCIV 309
+ G +
Sbjct: 300 AIPRGTRL 307
>gi|299141003|ref|ZP_07034141.1| methionyl-tRNA formyltransferase [Prevotella oris C735]
gi|298577969|gb|EFI49837.1| methionyl-tRNA formyltransferase [Prevotella oris C735]
Length = 326
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 159/317 (50%), Gaps = 15/317 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+VFMGT EFAVA+L+ LV +++V+V TQP +P GR + S V + A
Sbjct: 1 MKKEELRIVFMGTPEFAVASLRRLVEGGYNVVAVVTQPDKPVGRHQEQLQPSQVKQYAVA 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+P L P K+ + + L VV ++P+ + + G +N HA+LLP++R
Sbjct: 61 HGIPVLQPVKMKDPAFVEELRSYEADLQVVVAFRILPEIVWAMPRFGTFNVHAALLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI AI+ G+ ETG+ +DK +DTG + + I + + L L A
Sbjct: 121 GAAPINWAIINGETETGVTTFFLDKDIDTGKIIMQKHFAIPDEADVEYVYDGLMHLGAEI 180
Query: 178 MVEAMDKLEQNNLP--------LSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL 229
+E +DK+ +NN S E+ + A KI K ++++ A+ V++ +R L
Sbjct: 181 AIETIDKMLENNGNIDSISQGDFSRFSEDELKTAPKIFKETCQIDWTLPAKRVYDFVRGL 240
Query: 230 SPFPGAWLEMMIGNKHERIKLLESQLVE--GEGKPG--EVINPNFTIACSQGAVRIMRLQ 285
SP+PG W + + +K+ ++ G G G ++ + + C + ++ LQ
Sbjct: 241 SPYPGTWTHLEENGRQSVLKIFKTAKTSATGSGDTGSIKIEKGHLYVMCGDAWLEVLELQ 300
Query: 286 RAGGRVLDIGDFLLGCP 302
AG + ++ DFL G
Sbjct: 301 MAGKKRMNARDFLNGMR 317
>gi|306825762|ref|ZP_07459101.1| methionyl-tRNA formyltransferase [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304432123|gb|EFM35100.1| methionyl-tRNA formyltransferase [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 311
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 90/316 (28%), Positives = 156/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLSDDRYEILAVVTQPDRAVG-RKKVIQETPVKQVAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + ++ A L + N HASLLP+ RG
Sbjct: 59 LPIYQPEKLSGSPEMEAIMNLGADGIITAAFGQFLPSKLLYSMDFAVNVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLAIVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGEIQPEPQDPSQVTFSPNIKPEEEKLDWTKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEVLPVEGQGAPGEILSIGKKELIVAAAEGALSLKQVQPAGKPKMDIVS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|323127838|gb|ADX25135.1| methionyl-tRNA formyltransferase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 311
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 100/316 (31%), Positives = 162/316 (51%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + ++ I++V TQP R G R + ++ V + A +
Sbjct: 1 MT-KLLFMGTPQFSATVLKGLLENPNYEILAVVTQPDRSVG-RKKEIKMTPVKELALAYD 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + L +V A L N HASLLP++RG
Sbjct: 59 LPVYQPNKLSGSQELAELMSLGADGIVTAAFGQFLPTKLLDAVSFAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AIM G+ E G+ IM+M K +D G + PI N L ++L+++ ++
Sbjct: 119 APIHYAIMNGEKEAGVTIMEMVKEMDAGDMVAKASTPILETDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+++ L PQ + T++ IS + ++++ + A V NHIR +SP+P A +
Sbjct: 179 DSLPGYLSGELKPIPQDHSQATFSPNISPEQEQLDWTKPAREVFNHIRGMSPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E+QL EGEG+PGE+I +A QGA+ ++ +Q AG + I D
Sbjct: 239 ----YGQRFKIYEAQLAEGEGQPGEIIAKTKHMLVVAAGQGALSLLVVQPAGKPKMAIAD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G +G
Sbjct: 295 FLNGLGRKLEVGDFIG 310
>gi|168483274|ref|ZP_02708226.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
CDC1873-00]
gi|172043227|gb|EDT51273.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
CDC1873-00]
gi|332199761|gb|EGJ13836.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae GA41317]
Length = 311
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL + L +V A L + N HASLLPR RG
Sbjct: 59 LSIYQPEKLSGSPEMEDLMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGDIKPEPQDTSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSICKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|15901567|ref|NP_346171.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae TIGR4]
gi|148984179|ref|ZP_01817474.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP3-BS71]
gi|168493645|ref|ZP_02717788.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
CDC3059-06]
gi|169833515|ref|YP_001695110.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
Hungary19A-6]
gi|225859488|ref|YP_002740998.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae 70585]
gi|225861557|ref|YP_002743066.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
Taiwan19F-14]
gi|298230281|ref|ZP_06963962.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298254900|ref|ZP_06978486.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|298503481|ref|YP_003725421.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
TCH8431/19A]
gi|21542051|sp|Q97PA6|FMT_STRPN RecName: Full=Methionyl-tRNA formyltransferase
gi|238688300|sp|B1I7J8|FMT_STRPI RecName: Full=Methionyl-tRNA formyltransferase
gi|254789372|sp|C1C8X2|FMT_STRP7 RecName: Full=Methionyl-tRNA formyltransferase
gi|254789377|sp|C1CSZ4|FMT_STRZT RecName: Full=Methionyl-tRNA formyltransferase
gi|14973230|gb|AAK75811.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae TIGR4]
gi|147923468|gb|EDK74581.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP3-BS71]
gi|168996017|gb|ACA36629.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
Hungary19A-6]
gi|183576365|gb|EDT96893.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
CDC3059-06]
gi|225721614|gb|ACO17468.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae 70585]
gi|225728407|gb|ACO24258.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
Taiwan19F-14]
gi|298239076|gb|ADI70207.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
TCH8431/19A]
gi|301800540|emb|CBW33180.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae OXC141]
gi|327389920|gb|EGE88265.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae GA04375]
gi|332074075|gb|EGI84553.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae GA41301]
Length = 311
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL + L +V A L + N HASLLPR RG
Sbjct: 59 LSIYQPEKLSGSPEMEDLMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGDIKPEPQDTSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|229524947|ref|ZP_04414352.1| methionyl-tRNA formyltransferase [Vibrio cholerae bv. albensis
VL426]
gi|229338528|gb|EEO03545.1| methionyl-tRNA formyltransferase [Vibrio cholerae bv. albensis
VL426]
Length = 315
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 117/314 (37%), Positives = 175/314 (55%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAG-RGKKLTASPVKTLALEHNVP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ IM+MD LDTG + + +PI ++ +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q Q + YA K+SK E R+N+ +A ++ IRA +P+P + E+
Sbjct: 183 CLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E++ V PG +I +A Q + + LQ G + L + D
Sbjct: 243 ENSIKVWQARVETRAV--TQTPGTIIQADKSGIYVATGQDVLVLESLQIPGKKALPVQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNARADWFSVGSQL 314
>gi|71904041|ref|YP_280844.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes MGAS6180]
gi|123747759|sp|Q48S21|FMT_STRPM RecName: Full=Methionyl-tRNA formyltransferase
gi|71803136|gb|AAX72489.1| methionyl-tRNA formyltransferase [Streptococcus pyogenes MGAS6180]
Length = 311
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 160/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +F+ L+ L+ + + I+ V TQP R G R ++ V + A E +
Sbjct: 2 IKLLFMGTPQFSATVLKGLLDNPAYEILGVVTQPDRAVG-RKKDIKVTPVKQLALEHGIS 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL + + ++ A IL + N HASLLP++RG AP
Sbjct: 61 IYQPEKLSGSQELIEIMELGADGIITAAFGQFLPTILLDSVSFAINVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM GD E G+ IM+M K +D G + PI N L ++L+++ ++++
Sbjct: 121 IHYAIMNGDKEAGVTIMEMIKEMDAGDMVAKASTPILETDNVGTLFEKLAIIGRDLLLDS 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L PQ + T++ IS + ++++ S + V NHIR ++P+P A +
Sbjct: 181 LPAYLSGELKPIPQDHSQATFSPNISPEQEKLDWTMSDQEVFNHIRGMNPWPVAHTFLEG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R+K+ E+QL EGEG PG+VI + IA QGA+ ++ +Q AG + I DFL
Sbjct: 241 ----QRLKIYEAQLAEGEGLPGQVIVKTKKSLVIAAGQGALSLLVVQPAGKPKMAIADFL 296
Query: 299 L--GCPVIIGCIVG 310
G + +G +G
Sbjct: 297 NGLGRKLEVGDFIG 310
>gi|288927573|ref|ZP_06421420.1| methionyl-tRNA formyltransferase [Prevotella sp. oral taxon 317
str. F0108]
gi|288330407|gb|EFC68991.1| methionyl-tRNA formyltransferase [Prevotella sp. oral taxon 317
str. F0108]
Length = 327
Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats.
Identities = 95/313 (30%), Positives = 165/313 (52%), Gaps = 14/313 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT EFAV +L+ LV +++V+V TQP +P GR G V + A S+P
Sbjct: 6 LRIVFMGTPEFAVPSLKLLVEGGYNVVAVVTQPDKPVGRHGSTLQAPPVKQYALSKSIPV 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P ++ E++ L VV ++P+++ N G +N HA+LLP++RGAAPI
Sbjct: 66 LQPERMKDEDFLCQLRAFDAHLQVVVAFRMLPKQVWNLPPFGTFNVHAALLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ ETG+ +D+ +DTG + +++PI + N + L L A +E +
Sbjct: 126 NWAVINGETETGVTTFFLDEDIDTGRIISHKRLPIPDDANVEWVYNHLMNLGAELCIETV 185
Query: 183 DKLEQNNLP----LSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
D++ Q++ PQ + + +A KI K ++++ + A+ +++ IR LSP+PGAW E
Sbjct: 186 DRILQSDGKVESTEQPQDQ-PLKHAPKIFKETCQIDWNQPAKRIYDFIRGLSPYPGAWTE 244
Query: 239 MMIG-----NKHERIKLLESQL--VEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGG 289
+ NK + +K+ + + +PG + + + + + +Q AG
Sbjct: 245 IQKTGIEGENKPQVLKIFSATKTQIPANAQPGTFVVEGNRLFVNTADSLLELQEIQLAGK 304
Query: 290 RVLDIGDFLLGCP 302
+ + DFL G
Sbjct: 305 KRISSRDFLNGTR 317
>gi|167040392|ref|YP_001663377.1| methionyl-tRNA formyltransferase [Thermoanaerobacter sp. X514]
gi|256752270|ref|ZP_05493133.1| methionyl-tRNA formyltransferase [Thermoanaerobacter ethanolicus
CCSD1]
gi|166854632|gb|ABY93041.1| methionyl-tRNA formyltransferase [Thermoanaerobacter sp. X514]
gi|256748838|gb|EEU61879.1| methionyl-tRNA formyltransferase [Thermoanaerobacter ethanolicus
CCSD1]
Length = 310
Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats.
Identities = 107/313 (34%), Positives = 171/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L++VFMGT EFAV +LQ L + + +V TQP + G RG+K S V + A + +
Sbjct: 2 LKIVFMGTPEFAVPSLQKLFEEGYDVAAVVTQPDKQKG-RGMKFSFSPVKEVALQKGVEI 60
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K+ N D VVVAYG ++P+ IL K G N HASLLP++RGAA
Sbjct: 61 LQPEKIKNNPEFLNRLEEINPDAIVVVAYGKILPEEILTLPKYGCINVHASLLPKYRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ ETGI M MDK LDTG + + +PI + L +LS L A ++E
Sbjct: 121 PINWAIINGEKETGITTMLMDKGLDTGDMLIKKSIPILEEDDAETLHDKLSRLGAEVLIE 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ LE+ +L Q E +Y+ ++K +++ ++AE + N IR + P+PG +
Sbjct: 181 TLKGLEKGSLTPVKQREEEASYSPILTKEMGHIDWNKTAEEIRNLIRGMKPWPGCYTFYG 240
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ + ++VE G + G V+ + + C + A++I+ +Q+ G + + I +
Sbjct: 241 D----KMLKIWKGEIVEYNGNEENGTVLKSKGDLIVKCDKDALKIVEIQQEGSKKMGIRE 296
Query: 297 FLLGCPVIIGCIV 309
+L+G + G I
Sbjct: 297 YLIGHNIPEGTIF 309
>gi|56551707|ref|YP_162546.1| methionyl-tRNA formyltransferase [Zymomonas mobilis subsp. mobilis
ZM4]
gi|73919430|sp|Q5NPC5|FMT_ZYMMO RecName: Full=Methionyl-tRNA formyltransferase
gi|56543281|gb|AAV89435.1| methionyl-tRNA formyltransferase [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 301
Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats.
Identities = 118/308 (38%), Positives = 172/308 (55%), Gaps = 9/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT +FA+ TL ALV + H IV+VY+QP RPAG RG S V K+A+E L
Sbjct: 1 MKIIFMGTPDFALPTLNALVDAGHEIVAVYSQPARPAG-RGKAPRPSPVEKRARELGLNV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E + F ADVAVV AYGL++P+ IL +LG N H SLLP+WRGAAP
Sbjct: 60 YTPVSLKEAETQKIFADHQADVAVVAAYGLLLPKAILEMPRLGCLNVHGSLLPKWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRAI+AGD E+G+ IM+MD+ LDTG + + K PI+ A + + +
Sbjct: 120 VQRAILAGDQESGVTIMQMDRGLDTGAMLKIEKTPIADKNAGALSDEIAHIGAKLMVEVL 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ P Q E+G +YA KI K E ++F + A IRA +P PGA+
Sbjct: 180 AQPEQ---YPPVKQPESGESYAAKIDKSEALIDFSKGAVQAERQIRAFAPKPGAFFLY-- 234
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ERI++LE+ + G GE ++ + I C +++ + +QRAG + + + D L G
Sbjct: 235 --NEERIRILEAHVQNQAGAVGETLDDHLLIGCGSDSLQPVIVQRAGRKAMKLEDMLRGF 292
Query: 302 PVIIGCIV 309
+ G +
Sbjct: 293 AIPRGTRL 300
>gi|317050726|ref|YP_004111842.1| methionyl-tRNA formyltransferase [Desulfurispirillum indicum S5]
gi|316945810|gb|ADU65286.1| methionyl-tRNA formyltransferase [Desulfurispirillum indicum S5]
Length = 312
Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats.
Identities = 123/313 (39%), Positives = 172/313 (54%), Gaps = 12/313 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
RV FMGT EF+V L+AL +S + I V TQP RPAG R L+ SAV KA + +P
Sbjct: 6 AKRVGFMGTPEFSVPALEAL-ASVYEIPIVITQPDRPAG-RTLQLTPSAVKTKALQLGIP 63
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P ++ + Q N D VVVAYG ++PQ L+ G YN HASLLP +RGA
Sbjct: 64 VLTPARVRKNPQFLAQIADLNLDAIVVVAYGQILPQEFLDIPPFGCYNIHASLLPHFRGA 123
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI+ G ETGI I++MD LDTG + + PI + L L+ L A A++
Sbjct: 124 APIQRAILEGCPETGITIIRMDAGLDTGDMVLKKATPIDAMNAAQ-LHDHLAPLGAEAIL 182
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EA+ + Q +PQ + TYA K+ + E + + A + IRA +P+PG
Sbjct: 183 EALAAVFQGTAQFTPQDHSQHTYAPKLRREEGILTWHEDAVTLERRIRAFTPWPGCRCRW 242
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+LE++ +G G PG+V++ IAC QGA+R+ ++Q G RV+D
Sbjct: 243 RDKD----VKILEAEPTQGSGAPGQVLSIDLQGIEIACRQGALRLKKVQPQGKRVIDAHA 298
Query: 297 FLLGCPVIIGCIV 309
F G V +G
Sbjct: 299 FANGYGVQVGNTF 311
>gi|149020817|ref|ZP_01835346.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP23-BS72]
gi|225857348|ref|YP_002738859.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae P1031]
gi|254789376|sp|C1CM71|FMT_STRZP RecName: Full=Methionyl-tRNA formyltransferase
gi|147930458|gb|EDK81441.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP23-BS72]
gi|225724707|gb|ACO20559.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae P1031]
gi|301794710|emb|CBW37161.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae INV104]
Length = 311
Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL + L +V A L + N HASLLPR RG
Sbjct: 59 LSIYQPEKLSGSPEMEELMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGDIKPEPQDTSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|148994054|ref|ZP_01823410.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP9-BS68]
gi|168488546|ref|ZP_02712745.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae SP195]
gi|194398296|ref|YP_002038346.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae G54]
gi|238690850|sp|B5E782|FMT_STRP4 RecName: Full=Methionyl-tRNA formyltransferase
gi|147927521|gb|EDK78549.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP9-BS68]
gi|183572799|gb|EDT93327.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae SP195]
gi|194357963|gb|ACF56411.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae G54]
gi|332072566|gb|EGI83049.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae GA17570]
Length = 311
Score = 178 bits (452), Expect = 8e-43, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL + L +V A L + N HASLLPR RG
Sbjct: 59 LSIYQPEKLSGSPEMEELMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGDIKPEPQDTSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSICKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|15903622|ref|NP_359172.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae R6]
gi|116515769|ref|YP_816998.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae D39]
gi|148997790|ref|ZP_01825354.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP11-BS70]
gi|168575073|ref|ZP_02721036.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae MLV-016]
gi|182684678|ref|YP_001836425.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae CGSP14]
gi|307068360|ref|YP_003877326.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae AP200]
gi|33516864|sp|Q8DNR7|FMT_STRR6 RecName: Full=Methionyl-tRNA formyltransferase
gi|122278156|sp|Q04J40|FMT_STRP2 RecName: Full=Methionyl-tRNA formyltransferase
gi|238691186|sp|B2IS85|FMT_STRPS RecName: Full=Methionyl-tRNA formyltransferase
gi|15459246|gb|AAL00383.1| Methionyl-tRNA formyltransferase [Streptococcus pneumoniae R6]
gi|116076345|gb|ABJ54065.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae D39]
gi|147756289|gb|EDK63331.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP11-BS70]
gi|182630012|gb|ACB90960.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae CGSP14]
gi|183578831|gb|EDT99359.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae MLV-016]
gi|306409897|gb|ADM85324.1| Methionyl-tRNA formyltransferase [Streptococcus pneumoniae AP200]
Length = 311
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 93/316 (29%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL + L +V A L + N HASLLPR RG
Sbjct: 59 LSIYQPEKLSGSPEMEDLMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ + +T++ I E ++N+ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGDIKPEPQDTSQVTFSPNIKSEEEKLNWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|300728247|ref|ZP_07061615.1| methionyl-tRNA formyltransferase [Prevotella bryantii B14]
gi|299774482|gb|EFI71106.1| methionyl-tRNA formyltransferase [Prevotella bryantii B14]
Length = 326
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 97/313 (30%), Positives = 157/313 (50%), Gaps = 13/313 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT EFAV +L+ALV +++V+V TQP +P GR S V + A LP
Sbjct: 6 LRIVFMGTPEFAVESLRALVEGGYNVVAVVTQPDKPVGRHQDVLQASQVKQYALSVGLPV 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P K+ + + L VV ++P+ + +LG +N HA+LLP++RGAAPI
Sbjct: 66 LQPVKMKDPAFVEELRSYKADLQVVVAFRMLPEIVWGMPRLGTFNVHAALLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ ETG+ +D +DTG + + PI + + L L A +E +
Sbjct: 126 NWAVINGETETGVTTFFLDHDIDTGRIIMQKHFPIPDQADVEYVYDGLMHLGADIAIETI 185
Query: 183 DKLEQNN--LPLSPQIENGIT---YAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
D++ N + PQ G +A KI K +N+ + A+ +++ IR LSP+PG W
Sbjct: 186 DQIIACNGEIESMPQPAEGEIELKHAPKIFKETCEINWNQPAKRIYDFIRGLSPYPGTWT 245
Query: 238 EMM-IGNKHERIKLLESQLVEGEGKP-----GEV--INPNFTIACSQGAVRIMRLQRAGG 289
+ + N+ + +L+ +P G + + +A + + I+ LQ G
Sbjct: 246 NLKEVSNEDAKALVLKIFKTAKTDQPVHDPVGTIKVDKSHLYVATADSWLEILELQMPGK 305
Query: 290 RVLDIGDFLLGCP 302
+ + I DFL G
Sbjct: 306 KRMLIKDFLNGNR 318
>gi|307127949|ref|YP_003879980.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae 670-6B]
gi|306485011|gb|ADM91880.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae 670-6B]
Length = 311
Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL + L +V A L + N HASLLPR RG
Sbjct: 59 LSIYQPEKLSGSPEMEDLMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGALFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGDIKPEPQDTSQVTFSPNIKPKEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|282879661|ref|ZP_06288392.1| methionyl-tRNA formyltransferase [Prevotella timonensis CRIS 5C-B1]
gi|281306609|gb|EFA98638.1| methionyl-tRNA formyltransferase [Prevotella timonensis CRIS 5C-B1]
Length = 321
Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats.
Identities = 105/316 (33%), Positives = 164/316 (51%), Gaps = 16/316 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR++FMGT EFAVA+LQALV + +V+V TQP +P GR S V K A +LP
Sbjct: 6 LRIIFMGTPEFAVASLQALVQGGYHVVAVVTQPDKPVGRHQQTLQASEVKKYALSQNLPV 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL ++ L+ VV ++P+ + + + G +N HA+LLP++RGAAPI
Sbjct: 66 LQPAKLKDPDFLTQLADYKADLQVVVAFRMLPEVVWSMPRFGTFNVHAALLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ +TG+ +D ++DTG + +++PI + + + +L VL A ++ +
Sbjct: 126 NWAIIYGETKTGVTTFFLDHNIDTGRIIMQKQLPIPEDADVEYVYDKLMVLGAEICLDTI 185
Query: 183 DKLEQN-------NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
DKL N Q E+ + A KI K +N+ +SA +++N +R LSP+P A
Sbjct: 186 DKLLANDGKIAATPQNQLVQSEHNLLPAPKIFKETCEINWNQSARDIYNFVRGLSPYPAA 245
Query: 236 WLEMMIGNK-----HERIKLLESQLV--EGEGKPGEVINP--NFTIACSQGAVRIMRLQR 286
W I IK+ ++QL KPG + +A + + I LQ
Sbjct: 246 WTTWNISKDDPTSKQVMIKIYKTQLTGEATTEKPGSINTDQRRIYVATTTEWLEITELQM 305
Query: 287 AGGRVLDIGDFLLGCP 302
AG + ++ DFL G
Sbjct: 306 AGKKRMNAKDFLNGWR 321
>gi|108761879|ref|YP_629656.1| methionyl-tRNA formyltransferase [Myxococcus xanthus DK 1622]
gi|123374766|sp|Q1DCG7|FMT_MYXXD RecName: Full=Methionyl-tRNA formyltransferase
gi|108465759|gb|ABF90944.1| methionyl-tRNA formyltransferase [Myxococcus xanthus DK 1622]
Length = 312
Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats.
Identities = 112/309 (36%), Positives = 165/309 (53%), Gaps = 10/309 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R+VFMGT EFAV++L A +V+V TQP +P G RG V + A +P L
Sbjct: 5 RIVFMGTPEFAVSSLAACFELG-DVVAVVTQPDKPKG-RGNTVTAPPVKELALSRGVPVL 62
Query: 64 VPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
PTK E+ + DV VV AYG ++P+ +L G N H SLLPR+RGAAPI
Sbjct: 63 QPTKLRTPPFAEELRQYAPDVCVVTAYGRILPKDLLELPTHGCVNVHGSLLPRFRGAAPI 122
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI GD ETG+++M MD+ LDTGPV M+++ I+ + +A L +L+ L + E +
Sbjct: 123 QWAIAHGDTETGVSLMVMDEGLDTGPVLAMKRMAIAPDETSASLYPKLAALGGEVLREFL 182
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
L PQ G+ A I K + R++F + A + +RA +P+PGA+ +
Sbjct: 183 PAYLSGELKPVPQPSEGMVLAPIIEKDQGRLDFTKPAVELERRLRAFTPWPGAFTTLGG- 241
Query: 243 NKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +K+ +Q G G PG V+ +AC +G++ ++ LQ G RV+ DFL
Sbjct: 242 ---KLLKVHRAQARGGSGAPGTVLASGPDGIEVACGEGSLVLLDLQPEGKRVMRAADFLQ 298
Query: 300 GCPVIIGCI 308
G + G
Sbjct: 299 GHKLAPGSQ 307
>gi|149006596|ref|ZP_01830295.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP18-BS74]
gi|147761894|gb|EDK68857.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP18-BS74]
gi|332072909|gb|EGI83390.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae GA17545]
Length = 311
Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL + L +V A L + N HASLLPR RG
Sbjct: 59 LSIYQPEKLSGSPEMEELMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + F R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMIFRRSIPITDEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGDIKPEPQDTSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VE +G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEDQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|261367359|ref|ZP_05980242.1| methionyl-tRNA formyltransferase [Subdoligranulum variabile DSM
15176]
gi|282570119|gb|EFB75654.1| methionyl-tRNA formyltransferase [Subdoligranulum variabile DSM
15176]
Length = 306
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 98/311 (31%), Positives = 169/311 (54%), Gaps = 9/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT + A +L AL+ + H I +V+T+ +P G R V + A+++ +P
Sbjct: 1 MKILFMGTPDIAAESLAALIDAGHEICAVFTRRDKPVG-RKQILTAPPVKQLAEKYGIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + S D+ VVVAYG +IP ++L+ + G N H SLLP++RG+AP
Sbjct: 60 YQPRTLRDGSSDDLIRSLAPDIVVVVAYGCIIPPQLLHVARYGCINLHVSLLPKYRGSAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ GD TG++IM++D+ LDTG V + V I + L +S A +V A
Sbjct: 120 IQWAVLNGDTRTGVSIMQLDEGLDTGDVLMVEPVDIEPEETSGQLFDRVSATGAKTLVAA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++KL+ L PQ + T A ++K + +F ++A ++HN +R ++P+P AW
Sbjct: 180 LEKLQAGELEPVPQQQELATLAPPLTKDMAKFDFSQTAAHIHNWVRGMNPWPVAWF---- 235
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVIN-PNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+RIK+LE ++ + PG V+ TIA ++GAV ++ + GG+ + +
Sbjct: 236 VQDGKRIKVLECRVAKETACAAPGTVLALKPLTIAAAEGAVELLTVTPEGGKPMPGTAWA 295
Query: 299 LGCPVIIGCIV 309
G + +G +
Sbjct: 296 AGRRLKVGDSL 306
>gi|294138833|ref|YP_003554811.1| methionyl-tRNA formyltransferase [Shewanella violacea DSS12]
gi|293325302|dbj|BAJ00033.1| methionyl-tRNA formyltransferase [Shewanella violacea DSS12]
Length = 319
Score = 178 bits (451), Expect = 1e-42, Method: Composition-based stats.
Identities = 116/316 (36%), Positives = 172/316 (54%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L +VF GT +FA LQAL+ S H+++ VY+QP RPAG RG K S V A E +P
Sbjct: 3 PLNIVFAGTPDFAARHLQALIDSEHNVIGVYSQPDRPAG-RGKKLQASPVKILALEHDIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E +Q LS D+ VVVAYGL++PQ +L+ +LG N H S+LPRWRGAA
Sbjct: 62 VYQPKSLRDEAAQQELSGLNADLMVVVAYGLILPQVVLDTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETGI IM+MD LDTG + ++ I + + L +L++ A+++
Sbjct: 122 PIQRALWAGDKETGITIMQMDIGLDTGDMLLKTQLTIQDDDTSGSLYDKLALQGPDALIQ 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L + L Q E YA+K+SK E +++ + A + IRA +P+P +
Sbjct: 182 ALTGLAKGELQAEKQDETLANYAKKLSKEEAELDWNKPALQLWREIRAFNPWPISHF--- 238
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ ++++ E + G +I IA +G + + +Q G + L +G
Sbjct: 239 -SHNDASIKIRQAKVSESISDAPAGTIISADKNGIEIATGEGVLSLQNMQLPGKKPLSVG 297
Query: 296 DFLL--GCPVIIGCIV 309
D L G G +
Sbjct: 298 DILNSRGDWFTPGTRL 313
>gi|288800031|ref|ZP_06405490.1| methionyl-tRNA formyltransferase [Prevotella sp. oral taxon 299
str. F0039]
gi|288333279|gb|EFC71758.1| methionyl-tRNA formyltransferase [Prevotella sp. oral taxon 299
str. F0039]
Length = 325
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 98/312 (31%), Positives = 156/312 (50%), Gaps = 12/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT EFAVATL L+ ++V+V TQP +P GR G S V A ++P
Sbjct: 6 LRIVFMGTPEFAVATLDNLIKEDFNVVAVVTQPDKPVGRHGSVLQPSPVKTYACSKNIPV 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P K+ E +++ L VV ++P+ + N G +N HASLLP++RGAAPI
Sbjct: 66 LQPMKMKDEAFQEELRSYNADIQVVVAFRMLPESVWNMPSYGTFNVHASLLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ +TG+ +D +DTG + ++ I + + L L A A VE +
Sbjct: 126 NWAIINGEKKTGVTTFFLDHKIDTGRMILQKEFDIPVTADVEYVYDGLMNLGAQAAVETL 185
Query: 183 DKLEQNNLPLS---PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ + + E + A KI K ++N+ +S E ++N +R LSP+PG W +
Sbjct: 186 NAVIEHGKNIPTTVQKEEEVLHSAPKIFKDTCKINWYQSDEKLYNFVRGLSPYPGVWTLL 245
Query: 240 MIGNK-----HERIKLLESQLVEGEGK--PGEVI--NPNFTIACSQGAVRIMRLQRAGGR 290
+ E +K+ ++ K G ++ IA + + I LQ G R
Sbjct: 246 CSKEQADGEKEETLKIFKTTRTSESSKETVGTIVVDEGRILIATTDNYLSIEELQLPGKR 305
Query: 291 VLDIGDFLLGCP 302
++ DFL G
Sbjct: 306 RMNARDFLNGFK 317
>gi|291522864|emb|CBK81157.1| methionyl-tRNA formyltransferase [Coprococcus catus GD/7]
Length = 318
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 95/314 (30%), Positives = 156/314 (49%), Gaps = 13/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ VFMGT +FAV TLQ +V I +V TQP + G RG K + S V + A LP
Sbjct: 1 MKAVFMGTPDFAVPTLQKMVDMGIEITAVVTQPDKAKG-RGKKVIYSPVKECALAHDLPV 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ ++ DV VVVA+G ++P+ +L+ +LG N HASLLP++RGAA
Sbjct: 60 YQPVRIKKDPEFIQTLRDMAPDVIVVVAFGQILPKEVLDIPRLGCVNVHASLLPKFRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI+ G+ TG+ M MD LDTG + +V + + L +L+ +
Sbjct: 120 PIQWAIIDGEGVTGVTTMLMDVGLDTGDMLLKTEVSVDAKETGGSLHDKLAAAGGELLER 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKI-SKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ LE + Q ++ ++ K ++F + A + IR L+P+P A+ +
Sbjct: 180 TLIGLEAGTIVPEKQDDSQAGEYARMLDKELGHIDFNQPAVVIERLIRGLNPWPSAYTYI 239
Query: 240 MIGNKHERIKLLESQLVEGE-----GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +K+ E+++++ G+ EV + I GA+ + +Q G + +DI
Sbjct: 240 ----DGKTLKIWEAEVLDRNYGCEYGEVAEVTRSSLIIQTGVGALSVKSVQLEGKKRMDI 295
Query: 295 GDFLLGCPVIIGCI 308
FL G + G
Sbjct: 296 SAFLNGYTIKKGTR 309
>gi|284006132|emb|CBA71373.1| methionyl-tRNA formyltransferase [Arsenophonus nasoniae]
Length = 323
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 115/321 (35%), Positives = 175/321 (54%), Gaps = 17/321 (5%)
Query: 1 MT--LRVVFMGTSEFAVATLQALV--SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ 56
M+ LR++F GT +FA L AL+ + IV V TQP +PAG RG K S V A+
Sbjct: 1 MSDCLRIIFAGTPDFAAQHLAALLSFKDKYQIVGVLTQPDKPAG-RGRKLASSPVKILAE 59
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ ++ PT L E ++++ DV VVVAYGL++P+ +LN +G N H SLLPR
Sbjct: 60 KANIAVFQPTTLKTAESQRWIENKHADVMVVVAYGLILPEVVLNMLPIGCLNVHGSLLPR 119
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
WRGAAPIQR+I AGD ETGI IM+MD LDTG + + PI +A L Q+L+ +
Sbjct: 120 WRGAAPIQRSIWAGDKETGITIMQMDSGLDTGDMLYKVSCPIELKDTSATLYQKLAKIGP 179
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
A++ +D + Q TYAEK+SK E +++ SAE + IRA +P+P +
Sbjct: 180 TALLHTLDLVASAQAKPEKQNNTFATYAEKLSKDEALIDWTLSAEQIERCIRAFNPWPVS 239
Query: 236 WLEMMIGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGR 290
+ K+ ++++ + PG ++ +A +G + I+++Q AG +
Sbjct: 240 YFIFADNPI----KVWYAEVIYHQIDSSPGTILSADKTGIKVATGKGILNILKIQPAGKK 295
Query: 291 VLDIGDFLLGCP--VIIGCIV 309
++ + DFL I G I+
Sbjct: 296 IMLVCDFLNSRHGLFIPGTII 316
>gi|332200295|gb|EGJ14368.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae GA47368]
Length = 311
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL + L +V A L + N HASLLPR RG
Sbjct: 59 LSIYQPEKLSGSPEMEDLMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLLAYIAGDIKPEPQDTSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|91204616|emb|CAJ70844.1| strongly similar to methionyl-tRNA formyltransferase [Candidatus
Kuenenia stuttgartiensis]
Length = 320
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 105/314 (33%), Positives = 163/314 (51%), Gaps = 13/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ V+FMGT EFAV +L L S +++V+V TQP RP G R K S V KA E
Sbjct: 1 MNVIFMGTPEFAVPSLSFLAKSRYNVVAVVTQPDRPKG-RSKKLCPSPVKIKAMELGWEI 59
Query: 63 LVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + E + L + D VVVA+G ++ RI++ + N H+SLLP++RGAAP
Sbjct: 60 LQPANVNDEPVIKQLKRYAPDFIVVVAFGQLLSSRIIDIPRFKCINIHSSLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ +G+ M M +D G + + ISS+ N L++ LS + A ++E
Sbjct: 120 INWAIIKGETMSGVTSMVMTIKMDAGDIIAQKSASISSDENAGELEKRLSFMGAELLLET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + Q E +T+A K+ K + +++ + +HN IR ++P PGA+
Sbjct: 180 LDSIATETARYKKQDEEKVTFAPKLKKEDGLISWVEKTQEIHNRIRGVTPLPGAYAFYNK 239
Query: 242 GN---KHERIKLLESQLVEGEGK-----PGEVINP---NFTIACSQGAVRIMRLQRAGGR 290
N +RI LL++++ EG PG V+ +A G++ I +LQ G R
Sbjct: 240 NNLPETRKRIILLKTRIHEGCSTQESIIPGTVVETATCGIHVATLDGSICITQLQPEGKR 299
Query: 291 VLDIGDFLLGCPVI 304
+D DF+ G V
Sbjct: 300 AMDAQDFIRGYKVA 313
>gi|229515916|ref|ZP_04405373.1| methionyl-tRNA formyltransferase [Vibrio cholerae TMA 21]
gi|229347016|gb|EEO11978.1| methionyl-tRNA formyltransferase [Vibrio cholerae TMA 21]
Length = 315
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 117/314 (37%), Positives = 175/314 (55%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPDRPAG-RGKKLTASPVKTLALEHNVP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ IM+MD LDTG + + +PI ++ +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q Q + YA K+SK E R+N+ +A ++ IRA +P+P + E+
Sbjct: 183 CLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E+Q V PG ++ +A Q + + LQ G + L + D
Sbjct: 243 ENSIKVWQARVETQAV--TQAPGTIVQADKSGIYVATGQDVLVLESLQIPGKKALPVQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNARADWFSVGSQL 314
>gi|157803422|ref|YP_001491971.1| methionyl-tRNA formyltransferase [Rickettsia canadensis str.
McKiel]
gi|161789009|sp|O33520|FMT_RICCK RecName: Full=Methionyl-tRNA formyltransferase
gi|157784685|gb|ABV73186.1| methionyl-tRNA formyltransferase [Rickettsia canadensis str.
McKiel]
Length = 303
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 107/310 (34%), Positives = 173/310 (55%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMGT EFAV TL+ L+ + H + +V+TQ P+ G RGL S +H+ A E +P
Sbjct: 1 MKVIFMGTPEFAVPTLKKLI-AHHEVTAVFTQQPKAKG-RGLSLAQSPIHQLACEHQIPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P+ + NAD+ VV+AYG ++P+ IL+A K G N H S LPR RGAAP
Sbjct: 59 YTPSTLRNDKTINLINKVNADIIVVIAYGFIVPKAILDAKKYGCLNIHPSDLPRHRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QR I+ GD + + IM+MD LDTG + + L + + L A ++
Sbjct: 119 LQRTIIEGDKTSSVCIMRMDTGLDTGDILMKEDFDLEERTTLKELHNKCANLGAELLINT 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + +N+ Q +GITYA K++K E ++N+ SA ++ IR ++P+PG +
Sbjct: 179 L--VNIDNIVPIKQSSDGITYAHKLTKQEGKINWQDSAYSIDCKIRGMNPWPGVYFSYDD 236
Query: 242 GNKHERIKLLESQL--VEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ IK+LE++ V+ PG VI+ IAC G +++ +LQ+ + L+I +FLL
Sbjct: 237 ----KIIKILEAEYLNVDHHFTPGTVISDKLEIACGSGILQVKKLQQESKKALNIEEFLL 292
Query: 300 GCPVIIGCIV 309
G ++ ++
Sbjct: 293 GTRILKATVL 302
>gi|310819440|ref|YP_003951798.1| methionyl-tRNA formyltransferase [Stigmatella aurantiaca DW4/3-1]
gi|309392512|gb|ADO69971.1| Methionyl-tRNA formyltransferase [Stigmatella aurantiaca DW4/3-1]
Length = 317
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 113/309 (36%), Positives = 171/309 (55%), Gaps = 10/309 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R+VFMGT EFAVA+L A + +V+V TQP +P G RG V A E +P L
Sbjct: 5 RIVFMGTPEFAVASLAACLDIG-EVVAVVTQPDKPKG-RGNALTAPPVKVLALERGVPVL 62
Query: 64 VPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P K E+ DV VV AYG ++P+ +L + G N HASLLPR+RGAAPI
Sbjct: 63 QPPKLRTPPFSEELRKLAPDVCVVTAYGKILPKDVLEVPRRGCVNVHASLLPRFRGAAPI 122
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI GD ETG+++M MD+ LDTGPV M+++PI+ +A L +LS L + E++
Sbjct: 123 QWAIAHGDAETGVSLMCMDEGLDTGPVLEMKRLPIAPEDTSATLHDKLSQLGGGILRESL 182
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ L PQ G+ A I K + +++F R A + +RA +P+PG + +
Sbjct: 183 PAYLRGELKPVPQPTEGVVLAPIIQKEDGQLDFTRPAVELERRLRAFTPWPGVFTGLNGA 242
Query: 243 NKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
R+K+ +++ G+G PG V+ + +AC++G++ ++ +Q G RV+ +FL
Sbjct: 243 ----RLKVHRTKVGAGQGAPGTVLAASSAGIEVACAEGSLVLLDVQPEGRRVMSAHEFLA 298
Query: 300 GCPVIIGCI 308
G + G
Sbjct: 299 GHKLAPGSQ 307
>gi|255038559|ref|YP_003089180.1| methionyl-tRNA formyltransferase [Dyadobacter fermentans DSM 18053]
gi|254951315|gb|ACT96015.1| methionyl-tRNA formyltransferase [Dyadobacter fermentans DSM 18053]
Length = 297
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 160/302 (52%), Gaps = 11/302 (3%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT EFAV +LQ+LV + ++V+V T P +PAG RG K S V A+ +P L P K
Sbjct: 1 MGTPEFAVPSLQSLVENKSNVVAVVTVPDKPAG-RGQKQTSSPVKVYAESQGIPVLQPEK 59
Query: 68 LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127
L + + L VV ++P+ + N G +N H+SLLP++RGAAPI A++
Sbjct: 60 LKNPAFLEELKSYNADLQVVVAFRMLPEVVWNMPAKGTFNLHSSLLPQYRGAAPINWAVI 119
Query: 128 AGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQ 187
G+ ETG+ ++K +DTG + F K PIS + N L + L A +V+ ++ + Q
Sbjct: 120 NGETETGVTTFFIEKDIDTGKIIFQDKEPISPDDNAGTLYERLMRKGADLVVKTVEAIAQ 179
Query: 188 NNLPLSPQI-ENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ P PQ + I A KI + +++ + A ++HN +R LSP+P AW + +
Sbjct: 180 GSYPQEPQDEPHDIKAAPKIFRETCEIDWNKPASDIHNFVRGLSPYPAAWTTLNAFSC-- 237
Query: 247 RIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
K+ ++++V EG +PGE N G + I LQ G + + IGDFL G
Sbjct: 238 --KVFKTKMVDFEGNAQPGEYTTDNKTYLHFRTGDGWLAIEELQIEGKKRMAIGDFLRGY 295
Query: 302 PV 303
+
Sbjct: 296 KL 297
>gi|326803899|ref|YP_004321717.1| methionyl-tRNA formyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650113|gb|AEA00296.1| methionyl-tRNA formyltransferase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 318
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 109/323 (33%), Positives = 171/323 (52%), Gaps = 20/323 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M ++VFMGT EF+V +LQAL+ + + +V TQP RP G R + SAV + AQ
Sbjct: 1 MK-KIVFMGTPEFSVRSLQALIDHPDYEVSAVVTQPDRPVG-RKHRLQASAVKEAAQAAD 58
Query: 60 LPALVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+P P K+ Q++ + D+ V AYG +P+R+LN K G N HASLLP++R
Sbjct: 59 IPVYQPEKISQDQDIDQLLSQGDIDLIVTAAYGQFLPERLLNYPKYGAINVHASLLPKYR 118
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
G AP+ AI G+ ETGI+I++M K +D G + +PI + A + LS L +
Sbjct: 119 GGAPVHYAIWKGEKETGISIIRMVKKMDAGAILKQAAIPIDDQVTVAEMFDRLSELGSQV 178
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
++E + L + +PQ E T++ I++ E RVN+ +A+ +HN +RA + +P A
Sbjct: 179 LLETLPALFDGTVTETPQNEEEATFSPNITREEERVNWDNTAQEIHNQVRAFNSWPVAHT 238
Query: 238 EMMIGNKHERIKLLESQLV---EGEGKPGEVIN-----PNFTIACSQG-AVRIMRLQRAG 288
+R K+ S+++ E + PG VI F +AC G + I +Q AG
Sbjct: 239 FFDD----KRWKIWASEVLEDDETDQAPGTVIAIDKKPARFLVACGSGTVLAITEIQPAG 294
Query: 289 GRVLDIGDFLLG--CPVIIGCIV 309
+ +DI F+ G + +G
Sbjct: 295 KKAMDIRSFINGGAGQIEVGDTF 317
>gi|153206914|ref|ZP_01945732.1| methionyl-tRNA formyltransferase [Coxiella burnetii 'MSU Goat
Q177']
gi|212219504|ref|YP_002306291.1| methionyl-tRNA formyltransferase [Coxiella burnetii CbuK_Q154]
gi|238065947|sp|B6J655|FMT_COXB1 RecName: Full=Methionyl-tRNA formyltransferase
gi|120576987|gb|EAX33611.1| methionyl-tRNA formyltransferase [Coxiella burnetii 'MSU Goat
Q177']
gi|212013766|gb|ACJ21146.1| methionyl-tRNA formyltransferase [Coxiella burnetii CbuK_Q154]
Length = 314
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 133/319 (41%), Positives = 196/319 (61%), Gaps = 14/319 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+L++VF GT +FAV TL+AL+ SSH +++VYTQP RP+G RG K + S V + A++ +
Sbjct: 1 MSLKIVFAGTPQFAVPTLRALIDSSHRVLAVYTQPDRPSG-RGQKIMESPVKEIARQNEI 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P + E E+ ++ NADV VVVAYGL++P++ LNA +LG N HASLLPRWRGA
Sbjct: 60 PIIQPFSLRDEVEQEKLIAMNADVMVVVAYGLILPKKALNAFRLGCVNVHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI+AGD ETGI+IM+M++ LDTG + ISS A L LS++ A ++
Sbjct: 120 APIQRAILAGDRETGISIMQMNEGLDTGDMLAKSACVISSEDTAADLHDRLSLIGADLLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E++ KLE+ ++ L Q E TYA KI K E +N+ +SA + +RA +P P A+
Sbjct: 180 ESLAKLEKGDIKLEKQDEASATYASKIQKQEALINWRKSAVEIARQVRAFNPTPIAFTYF 239
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
++ + +V+ + +PG ++ +IA G +R+ +LQ G RV
Sbjct: 240 EGQPM----RIWRATVVDEKTDFEPGVLVDADKKGISIAAGSGILRLHQLQLPGKRVCSA 295
Query: 295 GDFLL--GCPVIIG-CIVG 310
GDF+ G +I G + G
Sbjct: 296 GDFINAHGDKLIPGKTVFG 314
>gi|315607820|ref|ZP_07882813.1| methionyl-tRNA formyltransferase [Prevotella buccae ATCC 33574]
gi|315250289|gb|EFU30285.1| methionyl-tRNA formyltransferase [Prevotella buccae ATCC 33574]
Length = 322
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 152/313 (48%), Gaps = 14/313 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR++FMGT EFAV TL+ L ++IV+V TQP RP GR S V K A LP
Sbjct: 6 LRIIFMGTPEFAVGTLKRLYEGGYNIVAVVTQPDRPVGRHQDTLQPSEVKKYALAHGLPI 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P K+ + + L+ +V ++P+ + + + G +N HA+LLP++RGAAPI
Sbjct: 66 LQPEKMKDPTFIEQLASYKADLQIVVAFRMLPEVVWSRPRFGTFNVHAALLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ ETG+ ++K +DTG + R PI + + + L L A VE +
Sbjct: 126 NWAIINGETETGVTTFFLNKDIDTGRIILQRHFPIPDDADVEYVYNGLMELGAQTAVETV 185
Query: 183 DK----------LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
D+ Q + + A KI K R+N+ R A+ V++ +R LSP+
Sbjct: 186 DRLLAGNGTVASTAQAEWLDHNVPTDTLHTAPKIFKETCRINWNRPAKRVYDFVRGLSPY 245
Query: 233 PGAWLEMMIGNKHERIKLLES--QLVEGEGKPGEVINPN--FTIACSQGAVRIMRLQRAG 288
PG+W + + +K+ ++ PG V IAC + I LQ AG
Sbjct: 246 PGSWTDNVSFPTKAPLKIFKTGKTGEATAATPGTVHQEGKRLLIACRDEWLEIFELQMAG 305
Query: 289 GRVLDIGDFLLGC 301
+ + DFL G
Sbjct: 306 KKRMAAKDFLNGF 318
>gi|332991528|gb|AEF01583.1| methionyl-tRNA formyltransferase [Alteromonas sp. SN2]
Length = 318
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 123/308 (39%), Positives = 181/308 (58%), Gaps = 14/308 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT +FA L AL+SS+H IV+VYTQP RPAG RG K S V AQE +P
Sbjct: 4 PLRIIFAGTPDFAAQHLSALLSSTHDIVAVYTQPDRPAG-RGKKLTPSPVKVLAQEHEIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E +Q L+ D+ +VVAYGL++P+ +L+A KLG N H S+LP+WRGAA
Sbjct: 63 VYQPASLKNNEAQQTLADINADLMIVVAYGLILPKSVLDAPKLGCLNVHGSILPKWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD+ETG+ IM+MD+ LDTG + + +PIS N +A L ++L+ L A+++
Sbjct: 123 PIQRAIWAGDSETGVTIMQMDEGLDTGDMLHIATLPISENDTSASLYEKLAELGPTALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ ++ L Q ++ TYA+K+SK E +N+ SA + ++RA +P+P AW ++
Sbjct: 183 VVNSID--TLSPVKQDDSEATYAKKLSKEEAFINWHDSAAQIARNVRAFNPWPVAWTKIE 240
Query: 241 IGNKHERIKLLESQLVEG---EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
N IK+ +++G PG +I + A+RI LQ G + L
Sbjct: 241 SQN----IKIWSVDVIDGLPTSDAPGTIIQADKHGIVVTTGSNALRINTLQIPGKKALPA 296
Query: 295 GDFLLGCP 302
D +
Sbjct: 297 ADVVNARK 304
>gi|300776232|ref|ZP_07086091.1| methionyl-tRNA formyltransferase [Chryseobacterium gleum ATCC
35910]
gi|300505365|gb|EFK36504.1| methionyl-tRNA formyltransferase [Chryseobacterium gleum ATCC
35910]
Length = 315
Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 95/315 (30%), Positives = 159/315 (50%), Gaps = 7/315 (2%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L+VVF+GT EFA +L+A+ S H +V V T + +G RG K S V A+E +
Sbjct: 1 MKSLKVVFLGTPEFAKTSLEAIHQSHHQVVGVVTVADKASG-RGQKIHQSPVKIYAEENN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P KL E+ + L VV ++P+ + K+G +N HASLLP +RGA
Sbjct: 60 IPVFQPEKLRNPEFLEELRKLDADVFVVVAFRMMPKVLFEMPKMGTFNLHASLLPDYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ G+ +TG +++ +D G + +++ I + N L L + A +V
Sbjct: 120 APINYAVINGEEKTGATTFFINEKIDEGNILLQQEIEILPDENAGSLHDRLMEMGAGLVV 179
Query: 180 EAMDKLEQNNLPLSPQIE-NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ +D L +N + PQ + A KI K +TR+N+ + ++ +H I +SP+P A+
Sbjct: 180 KTLDGLAENVIQEKPQPQVEHPKNAYKIFKEDTRINWQQPSKTIHQFILGMSPYPAAFTT 239
Query: 239 MMIGNKHERIKLL--ESQLVEGEGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ I N+ + +K+ + +L + G + F I G + LQ G + + +
Sbjct: 240 LKIENEEKGLKIFGGKFELSDHGKPAGTLDISKSGFKIYTQDGIYYPLELQLEGKKRMMV 299
Query: 295 GDFLLGCPVIIGCIV 309
DFL G G +
Sbjct: 300 KDFLNGFRNFDGITL 314
>gi|332525409|ref|ZP_08401569.1| methionyl-tRNA formyltransferase [Rubrivivax benzoatilyticus JA2]
gi|332108678|gb|EGJ09902.1| methionyl-tRNA formyltransferase [Rubrivivax benzoatilyticus JA2]
Length = 316
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 128/323 (39%), Positives = 171/323 (52%), Gaps = 20/323 (6%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M+ LR F GT EFA L A++++ + V TQP RPAG RG+K S V + A
Sbjct: 1 MSRLRAAFAGTPEFARVALDAMLAAGFEVPLVLTQPDRPAG-RGMKLQASPVKQCALAHG 59
Query: 60 LPALV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
LP + DV VV AYGL++PQ +L+ + G N H
Sbjct: 60 LPVAQPRSLRLDGKYPDEAAAGRAALEAAAPDVLVVAAYGLILPQWVLDLPRRGCINIHG 119
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL 170
SLLPRWRGAAPI RAI AGD ETGI IM+MD LDTGP+ + +PI+++ TA L +L
Sbjct: 120 SLLPRWRGAAPIHRAIEAGDAETGITIMQMDAGLDTGPMLLKQALPIAADDTTATLHDKL 179
Query: 171 SVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
+ L A +V+A+ + LP PQ E G YA KI K E V++ A + +RA
Sbjct: 180 AALGARLVVDAL--GRLDALPPLPQPEAGANYAAKIEKAEGAVDWTLPAAVIERRVRAFD 237
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRA 287
PFPG + E KL + +V G G+PG V+ + +AC GA+ + LQR
Sbjct: 238 PFPGCSFTL----DGEAFKLWRAAVVPGAGEPGAVLASGDGGLVVACGDGALELRELQRT 293
Query: 288 GGRVLDIGDFLLGCPVIIGCIVG 310
GGR + +FL G PV G +G
Sbjct: 294 GGRRVPAREFLKGRPVAAGTRLG 316
>gi|221232468|ref|YP_002511621.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae ATCC
700669]
gi|225855166|ref|YP_002736678.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae JJA]
gi|254789373|sp|B8ZMJ8|FMT_STRPJ RecName: Full=Methionyl-tRNA formyltransferase
gi|254789375|sp|C1CFV7|FMT_STRZJ RecName: Full=Methionyl-tRNA formyltransferase
gi|220674929|emb|CAR69505.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae ATCC
700669]
gi|225723088|gb|ACO18941.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae JJA]
Length = 311
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL + L +V A L + N HASLLPR RG
Sbjct: 59 LSIYQPEKLSGSPEMEELMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGDIKPEPQDTSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHAFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|297568345|ref|YP_003689689.1| methionyl-tRNA formyltransferase [Desulfurivibrio alkaliphilus
AHT2]
gi|296924260|gb|ADH85070.1| methionyl-tRNA formyltransferase [Desulfurivibrio alkaliphilus
AHT2]
Length = 318
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 109/315 (34%), Positives = 165/315 (52%), Gaps = 9/315 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
R+++MGT EFAVA LQAL+ + +V QP RP G RG K + A+ +P
Sbjct: 6 PYRIIYMGTPEFAVAPLQALLDHGEEVAAVVCQPDRPKG-RGKKLSPPPTKELAEHKGIP 64
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P+K+ +E+ ++ S+ D+ VV AYG ++P +LN LG N H SLLP +RGAA
Sbjct: 65 VLQPSKIRTDEFLDEIRSYQPDLLVVAAYGRILPGPLLNLPPLGTINIHGSLLPAYRGAA 124
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI+ G+ ETG+ IM+MD+ +DTG + R++PI + + L +S L A+VE
Sbjct: 125 PIQWAIINGEAETGVTIMQMDEGMDTGDILLQRRMPIHDDDTSGSLAARMSALGGQALVE 184
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ L+ + LP Q + T A + K +++ A + IR L P+P A +
Sbjct: 185 ALELLKADQLPPIKQDDTQATMAPLLCKTMADIDWKLPATKISCLIRGLDPWPLARTTLE 244
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI----NPNFT-IACSQGAVRIMRLQRAGGRVLDIG 295
S+ PG + N IA +G + + +QR GG+ L IG
Sbjct: 245 GQILRLFKPATASEPA--GAPPGTITMLQPENNLLGIATGEGCLLVEEIQREGGKRLPIG 302
Query: 296 DFLLGCPVIIGCIVG 310
F G P+ +G +G
Sbjct: 303 AFHRGHPLKLGQKLG 317
>gi|226942186|ref|YP_002797259.1| methionyl-tRNA formyltransferase [Azotobacter vinelandii DJ]
gi|226717113|gb|ACO76284.1| methionyl-tRNA formyltransferase [Azotobacter vinelandii DJ]
Length = 325
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 122/315 (38%), Positives = 174/315 (55%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA LQAL+++ V+VYTQP RPAG RG K + S V + A + +P
Sbjct: 15 PLRLVFAGTPEFAAEHLQALLTAGQRPVAVYTQPDRPAG-RGQKPMASPVKRLALQHGIP 73
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + + D+ +VVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 74 VLQPPTLRDAAAQAELAALEPDLLLVVAYGLILPQAVLDIPRLGCVNSHASLLPRWRGAA 133
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD E+G+ +M+M+ LDTGP+ PI + L L+ L A A+VE
Sbjct: 134 PIQRAIEAGDGESGVTVMRMEAGLDTGPMLLKVATPIRPDDTGGSLHDRLAGLGAQALVE 193
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L L Q + TYA K++K E R+++ R A+ + IRA P+P +
Sbjct: 194 AIGALAAGGLAGETQDDALATYAHKLNKDEARLDWSRPADELERRIRAFDPWPVCHSSLD 253
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+K+ + + +G G PG ++ T+AC GA+R+ RLQ GGR L +
Sbjct: 254 GAP----LKVFAASVEQGGGAPGTILAASRDGLTVACGSGALRLTRLQLPGGRPLAFAEL 309
Query: 298 LLGCP--VIIGCIVG 310
+G ++G
Sbjct: 310 YNSRREQFAVGQVLG 324
>gi|168486404|ref|ZP_02710912.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
CDC1087-00]
gi|183570545|gb|EDT91073.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
CDC1087-00]
Length = 311
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL + L +V A L + N HASLLPR RG
Sbjct: 59 LSIYQPEKLSGSPEMEELIKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGALFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGDIKPEPQDTSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|303254347|ref|ZP_07340455.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae BS455]
gi|303261835|ref|ZP_07347781.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP14-BS292]
gi|303263698|ref|ZP_07349620.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae BS397]
gi|303266638|ref|ZP_07352522.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae BS457]
gi|303268528|ref|ZP_07354321.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae BS458]
gi|301802436|emb|CBW35191.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae INV200]
gi|302598698|gb|EFL65736.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae BS455]
gi|302636918|gb|EFL67407.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP14-BS292]
gi|302641923|gb|EFL72277.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae BS458]
gi|302643800|gb|EFL74063.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae BS457]
gi|302646736|gb|EFL76961.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae BS397]
Length = 311
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 93/316 (29%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL + L +V A L + N HASLLPR RG
Sbjct: 59 LSIYQPEKLSGSPEMEELMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGDIKPEPQDTSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHAFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + IG G
Sbjct: 295 FLNGVGRTLTIGERFG 310
>gi|51244599|ref|YP_064483.1| methionyl-tRNA formyltransferase [Desulfotalea psychrophila LSv54]
gi|73919388|sp|Q6AQ97|FMT_DESPS RecName: Full=Methionyl-tRNA formyltransferase
gi|50875636|emb|CAG35476.1| probable methionyl-tRNA formyltransferase [Desulfotalea
psychrophila LSv54]
Length = 323
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 100/312 (32%), Positives = 171/312 (54%), Gaps = 7/312 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++FMGT +FA + L+AL++ +V+V TQP RP G RG K V A+E LP
Sbjct: 12 SLRIIFMGTPDFASSNLRALLAGPDQVVAVVTQPDRPKG-RGKKLTSPPVKVIAEEAGLP 70
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L PTK+ +E+ E ++ D+ VV AYG ++P+ IL+ LG N H SLLP++RGAA
Sbjct: 71 VLQPTKVRTDEFLEALAAYAPDLIVVTAYGRILPKPILDLAPLGCINVHGSLLPKYRGAA 130
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ GD+E G+ M+MD+ +DTG + + + S + L +L+ L A++E
Sbjct: 131 PIQWAVIQGDDEVGVTTMQMDEGMDTGDILLRKIIIPSPDETAGTLFDKLAELGTSALLE 190
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L++ + Q T A +SK + +++ R+A + + IR + P+P A+ +
Sbjct: 191 TIEGLKKGTIRAEAQDHAQATEAPMLSKNDGLIDWSRTATELESLIRGMDPWPSAFCFLE 250
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
K R+ + E + + +PG V+ IA + + + +Q G + + + F
Sbjct: 251 --GKRLRLFMPEVSYQKTDAQPGAVLRAGRDGLLIATGKNCLLVKEIQPEGKKRMTVEAF 308
Query: 298 LLGCPVIIGCIV 309
L G + ++
Sbjct: 309 LCGAKIGAETVL 320
>gi|163788100|ref|ZP_02182546.1| methionyl-tRNA formyltransferase [Flavobacteriales bacterium ALC-1]
gi|159876420|gb|EDP70478.1| methionyl-tRNA formyltransferase [Flavobacteriales bacterium ALC-1]
Length = 319
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 92/313 (29%), Positives = 163/313 (52%), Gaps = 7/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT +FAVATL+ L+ ++++V V T P R AG RG K SAV + A E +L
Sbjct: 7 LRIVFMGTPDFAVATLKTLLDHNYNVVGVITAPDRKAG-RGQKLRASAVKQFALEHNLNV 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P L E + + L ++ ++P+ + + G +N HASLLP++RGAAPI
Sbjct: 66 LQPKNLKAESFIEELKALNANLQIIVAFRMLPKVVWQMPEYGTFNLHASLLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ +TG+ +D+ +DTG + + I+ L EL + + +++ +
Sbjct: 126 HWAIINGETKTGVTTFFIDEKIDTGAIILSDETSIAEETTVGDLHDELMSIGSQLVIKTV 185
Query: 183 DKLEQNNLPLSPQIENGI-TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+++E +++ Q ++ A K+++ ++++ +S + ++N IR L+PFP AW +
Sbjct: 186 EQIETDSVSTEIQPQSEDLKTAYKLNRDNCKIDWTQSIDTIYNKIRGLNPFPTAWCFLDN 245
Query: 242 GNKH-ERIKLLESQLV--EGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
K IK+ + + + G +I +AC +G + I +Q G R +D+
Sbjct: 246 KEKELLTIKIYAIEKLTEKHNYDAGFIIATKEELKVACKEGYINIKEIQLPGKRKMDVKS 305
Query: 297 FLLGCPVIIGCIV 309
L G +
Sbjct: 306 LLNGFHFSKSAKL 318
>gi|328957298|ref|YP_004374684.1| methionyl-tRNA formyltransferase [Carnobacterium sp. 17-4]
gi|328673622|gb|AEB29668.1| methionyl-tRNA formyltransferase [Carnobacterium sp. 17-4]
Length = 317
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 99/317 (31%), Positives = 163/317 (51%), Gaps = 14/317 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT F+V L+AL+ S + +++V TQP RP G R S V A + LP
Sbjct: 2 IKIVFMGTPAFSVPILEALIDSEYEVIAVVTQPDRPVG-RKKILTASPVKAAAVQHGLPV 60
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ + ++ D+ + A+G +PQ++L+ K G N HASLLP++RG AP
Sbjct: 61 FQPEKISGSPEMEALIALEPDLIITAAFGQFLPQKLLSVPKYGAINVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A+M G+ ETG++IM M+K +D G + + + I+ N + L LS L +++
Sbjct: 121 VHYALMKGEKETGVSIMYMEKKMDAGDILSQKALEITRNDDVGTLFDRLSALGKDLLMDT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ KL ++ Q E +TY+ I + E V++ ++A V +R + P+P A+ +
Sbjct: 181 LPKLLAGDIMPVKQNEEEVTYSPNIKREEELVDWTKTAAEVDYQVRGMRPWPVAYTLLEG 240
Query: 242 GNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIG 295
R+KL + E + PG +I IAC V+I +Q AG + +
Sbjct: 241 N----RLKLWDVTPTEEKTTAVPGTIIRIEKEAIYIACGDQTVVKINEVQPAGKSKMTVM 296
Query: 296 DFLL--GCPVIIGCIVG 310
FL G + +G VG
Sbjct: 297 AFLSGVGSQLKVGEKVG 313
>gi|282878541|ref|ZP_06287322.1| methionyl-tRNA formyltransferase [Prevotella buccalis ATCC 35310]
gi|281299332|gb|EFA91720.1| methionyl-tRNA formyltransferase [Prevotella buccalis ATCC 35310]
Length = 323
Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats.
Identities = 104/312 (33%), Positives = 159/312 (50%), Gaps = 12/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT EFAV +L+ALV +++V+V TQP +P GR S V K A LP
Sbjct: 11 LRIVFMGTPEFAVGSLRALVEGDYNVVAVITQPDKPVGRHHDTLQASEVKKYALAQGLPV 70
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P K+ + + L+ VV ++P+ + LG +N HA+LLP++RGAAPI
Sbjct: 71 LQPQKMKDPAFVEQLAGYKADLQVVVAFRMLPEVVWAMPPLGTFNVHAALLPQYRGAAPI 130
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ TG+ +D +DTG + + +PI + + + L VL A +E +
Sbjct: 131 NWAVINGETTTGVTTFFLDHQIDTGRIILQKTMPIPDDADVEYVYNHLMVLGAQLCLETI 190
Query: 183 DKLEQN--NLPLSPQ-----IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
D+L +N +P +PQ E + A KI K ++N+ + A+ V++ IR LSP+P A
Sbjct: 191 DQLIENGGEIPSTPQEHYAADEAELHQAPKIFKETCQINWHQPAKRVYDFIRGLSPYPAA 250
Query: 236 WLEMMI-GNKHERIKLLESQLVE--GEGKPGE--VINPNFTIACSQGAVRIMRLQRAGGR 290
W K + +K+ +S + PG V N A + I LQ AG +
Sbjct: 251 WTIATDGNGKQQTLKIYKSSKTNLAADETPGTMWVENKKLYFATEDNWLEITELQMAGKK 310
Query: 291 VLDIGDFLLGCP 302
+ DFL G
Sbjct: 311 RMKAKDFLNGWR 322
>gi|187778896|ref|ZP_02995369.1| hypothetical protein CLOSPO_02491 [Clostridium sporogenes ATCC
15579]
gi|187772521|gb|EDU36323.1| hypothetical protein CLOSPO_02491 [Clostridium sporogenes ATCC
15579]
Length = 305
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 89/310 (28%), Positives = 162/310 (52%), Gaps = 13/310 (4%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +FAV +L+ L+ ++ +V+TQP RP G RG K +SAV + A E ++ P K
Sbjct: 1 MGTPDFAVPSLKKLIE-KFNVKAVFTQPDRPKG-RGKKLAMSAVKEVALENNIEVYQPIK 58
Query: 68 --LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
+ ++ N D +VVA+G ++ + +L+ K G N HASLLP++RGAAPI A
Sbjct: 59 LKNDEICIKKLKEINPDFIIVVAFGQILSKEVLDIPKYGCINLHASLLPKYRGAAPINWA 118
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
I+ G+ E+G M MD+ LDTG + V I+ ++ L L + +V + L
Sbjct: 119 IIKGEKESGNTTMFMDEGLDTGDMLLKNTVKIADDMTAGELHDILMESGSELLVTTIKGL 178
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKH 245
++ + Q I YA ++K ++++ ++++ ++ IR L+P P A+ + +
Sbjct: 179 KEGTVKREKQKSENIIYASMLNKQMGKIDWNKTSKEINLLIRGLNPRPVAYTQYK----N 234
Query: 246 ERIKLLESQLVE--GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
E +K+ S +++ PG ++ +A G + I +Q G + + + +++ G
Sbjct: 235 ETMKIYNSSILKESSNKTPGTILKVSKEGIKVATRDGILSITTVQFPGKKPMKVEEYIKG 294
Query: 301 CPVIIGCIVG 310
+ G ++G
Sbjct: 295 HDIEEGLVLG 304
>gi|160881303|ref|YP_001560271.1| methionyl-tRNA formyltransferase [Clostridium phytofermentans ISDg]
gi|160429969|gb|ABX43532.1| methionyl-tRNA formyltransferase [Clostridium phytofermentans ISDg]
Length = 315
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 92/318 (28%), Positives = 164/318 (51%), Gaps = 15/318 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT EFA +L+ L+ + ++ + TQP +P G R + V + A ++P
Sbjct: 1 MKILFMGTPEFARVSLEYLIKNKCEVIGIVTQPDKPVG-RKMTLTPPPVKEYALSENIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E ++ D+ +V AYG +IP+ IL+ + G + H SLLP++RGA+P
Sbjct: 60 YQPQTLKSAEFFDLIKEIAPDIIIVAAYGKLIPKYILDFPQYGCVDVHGSLLPKYRGASP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G+ TGI IM MD+ +DTG + I + L L+ + ++EA
Sbjct: 120 INAAIMNGEKVTGITIMYMDEGIDTGDMILKESTGIGKHETFGELHDRLAEIGGKLLIEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+++++ + Q E+ YA+KI +++ A+ +++ IR LSP P A+ +
Sbjct: 180 INQIQNGTVKREKQPESDTFYAKKIDDDMCEIDWNIPAKVIYDKIRGLSPSPAAFTWL-- 237
Query: 242 GNKHERIKLLESQLVE-------GEGKPGEVIN--PNFTIACSQGAVRIMRLQRAGGRVL 292
+++K+L++ + + K GEVI+ N + + I+ LQ GG+++
Sbjct: 238 --NGKKLKILKAIYSDYKDVSAIKDKKSGEVIDIRNNIEVFAIGYTIIILELQLEGGKIM 295
Query: 293 DIGDFLLGCPVIIGCIVG 310
DF+ G + G I+G
Sbjct: 296 SAKDFVNGRKIEKGMILG 313
>gi|90406715|ref|ZP_01214908.1| Methionyl-tRNA formyltransferase [Psychromonas sp. CNPT3]
gi|90312168|gb|EAS40260.1| Methionyl-tRNA formyltransferase [Psychromonas sp. CNPT3]
Length = 320
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 109/316 (34%), Positives = 177/316 (56%), Gaps = 10/316 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L ++F GT +FA LQAL+ + +V+VYTQP R AG RG K ++SAV + A + +
Sbjct: 1 MKNLNIIFAGTPDFAAKHLQALLDAQCHVVAVYTQPDRRAG-RGKKLMMSAVKQLALDNN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ P QE+ + D+ VVVAYGL++P IL +LG N H SLLPRWRG
Sbjct: 60 IAVYQPENFKQEDVRNEFADLKADLMVVVAYGLILPSAILEMPRLGCLNVHGSLLPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQRAI AGD +TG+ IM+MD LDTG + PI++ ++A L ++L+ L A+
Sbjct: 120 AAPIQRAIWAGDAQTGVTIMQMDVGLDTGAMLSKVICPINAQESSASLYEKLAKLAPPAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+E ++KL + + Q ++ TYA+K+SK E +N+ A+ + +RA +P+P ++ +
Sbjct: 180 IETIEKLAKGEITAEIQDDSLATYAKKLSKDEALINWSDDAKFIERCVRAFNPWPMSYFQ 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ ++ + +E + PG ++ +A +G + + +Q AG + + +
Sbjct: 240 LA--GNAVKVHQVSVLDIETDALPGTILMAYKTGIQVATGKGVLNLEVIQLAGKKAMPVQ 297
Query: 296 DFLLGCP--VIIGCIV 309
D L G ++
Sbjct: 298 DILNSRRELFAPGNVL 313
>gi|225868017|ref|YP_002743965.1| methionyl-tRNA formyltransferase [Streptococcus equi subsp.
zooepidemicus]
gi|259646050|sp|C0MH30|FMT_STRS7 RecName: Full=Methionyl-tRNA formyltransferase
gi|225701293|emb|CAW98292.1| methionyl-tRNA formyltransferase [Streptococcus equi subsp.
zooepidemicus]
Length = 311
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 158/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT R++FMGT +F+ LQ L+ + + I++V TQP R G R ++ V K A
Sbjct: 1 MT-RLIFMGTPQFSATVLQGLLENPAYDILAVVTQPDRAVG-RKKDITMTPVKKLALAHQ 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + +V A +L + N HASLLP++RG
Sbjct: 59 LPVFQPEKLSGSQELADIMALGADGIVTAAFGQFLPTVLLDSVTFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ GD E G+ IM+M K +D G + +PI N + +L++L ++
Sbjct: 119 APIHYAIINGDKEAGVTIMEMVKEMDAGDMISSASLPILDTDNVGTMFDKLAILGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + +L PQ + T++ +S E R+++ + A V NHIR ++P+P A +
Sbjct: 179 KTLPDYLSGDLKPVPQDHSQATFSPNLSAEEERLDWSKPAREVFNHIRGMNPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E++L EG G G++I +A +GA+ + +Q AG + I D
Sbjct: 239 ----DGQRFKIYEAELAEGSGSAGQIIAKTKKALVVAAGEGALSLTLVQPAGKPKMPIVD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G ++G
Sbjct: 295 FLNGIGRSLEVGDVLG 310
>gi|165918163|ref|ZP_02218249.1| methionyl-tRNA formyltransferase [Coxiella burnetii RSA 334]
gi|165918023|gb|EDR36627.1| methionyl-tRNA formyltransferase [Coxiella burnetii RSA 334]
Length = 314
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 134/319 (42%), Positives = 196/319 (61%), Gaps = 14/319 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+L++VF GT +FAV TL+AL+ SSH +++VYTQP RP+G RG K + S V + A++ +
Sbjct: 1 MSLKIVFAGTPQFAVPTLRALIDSSHRVLAVYTQPDRPSG-RGQKIMESPVKEIARQNEI 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P + E E+ ++ NADV VVVAYGL++P++ LNA +LG N HASLLPRWRGA
Sbjct: 60 PIIQPFSLRDEVEQEKLIAMNADVMVVVAYGLILPKKALNAFRLGCVNVHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI+AGD ETGI+IM+M++ LDTG V ISS A L LS++ A ++
Sbjct: 120 APIQRAILAGDRETGISIMQMNEGLDTGDVLAKSACVISSEDTAADLHDRLSLIGADLLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E++ KLE+ ++ L Q E TYA KI K E +N+ +SA + +RA +P P A+
Sbjct: 180 ESLAKLEKGDIKLEKQDEASATYASKIQKQEALINWRKSAVEIARQVRAFNPTPIAFTYF 239
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
++ + +V+ + +PG ++ +IA G +R+ +LQ G RV
Sbjct: 240 EGQPM----RIWRATVVDEKTDFEPGVLVDADKKGISIAAGSGILRLHQLQLPGKRVCSA 295
Query: 295 GDFLL--GCPVIIG-CIVG 310
GDF+ G +I G + G
Sbjct: 296 GDFINAHGDKLIPGKTVFG 314
>gi|289168458|ref|YP_003446727.1| methionyl-tRNA formyltransferase [Streptococcus mitis B6]
gi|288908025|emb|CBJ22865.1| methionyl-tRNA formyltransferase [Streptococcus mitis B6]
Length = 311
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 94/316 (29%), Positives = 159/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I+SV TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILSVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + L +V A L + N HASLLP+ RG
Sbjct: 59 LPIYQPEKLSGSPEMEDLMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ ++ +T++ I E ++++ +S + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGDIKPEPQEQSQVTFSPNIKPEEEKLDWTKSNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALAVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|94266528|ref|ZP_01290216.1| Methionyl-tRNA formyltransferase [delta proteobacterium MLMS-1]
gi|94268713|ref|ZP_01291264.1| Methionyl-tRNA formyltransferase [delta proteobacterium MLMS-1]
gi|93451496|gb|EAT02325.1| Methionyl-tRNA formyltransferase [delta proteobacterium MLMS-1]
gi|93452857|gb|EAT03377.1| Methionyl-tRNA formyltransferase [delta proteobacterium MLMS-1]
Length = 317
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 110/312 (35%), Positives = 163/312 (52%), Gaps = 9/312 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT EFAV L AL++ +V+V TQP +P G R K V + AQ +P
Sbjct: 6 PLRIIFFGTPEFAVPPLTALLAHGEEVVAVVTQPDKPKG-RSKKLCPPPVKELAQSSGIP 64
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K+ E++ D+ VV AYG ++P +LN LG N H SLLP +RGAA
Sbjct: 65 VLQPAKIKGEDFLATIGELKPDLLVVAAYGRILPGALLNLPPLGTINIHGSLLPAYRGAA 124
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI+ G+ ETG+ IM+MD+ +DTG + R++ I+ + T L +++ L A+VE
Sbjct: 125 PMQWAILNGEQETGVTIMQMDEGMDTGAILLQRRLTINDDDTTGSLAAKMAPLGGQALVE 184
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ L+ LP PQ +N T A + K +++ +SA + IRAL P+P A +
Sbjct: 185 ALELLKAGKLPPQPQDDNLATLAPPLCKTMAAIDWRQSAARISCQIRALDPWPLARTTLG 244
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI----NPNFT-IACSQGAVRIMRLQRAGGRVLDIG 295
R+ +PG V N IA QG + + +QR GG+ L +
Sbjct: 245 --EHPVRLFKPRVADEPAGAEPGTVTVANPENNLLGIATGQGCLLVGEIQREGGKRLTVE 302
Query: 296 DFLLGCPVIIGC 307
FL G + G
Sbjct: 303 AFLRGHRIKPGD 314
>gi|261416619|ref|YP_003250302.1| methionyl-tRNA formyltransferase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373075|gb|ACX75820.1| methionyl-tRNA formyltransferase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327071|gb|ADL26272.1| methionyl-tRNA formyltransferase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 307
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 100/309 (32%), Positives = 159/309 (51%), Gaps = 5/309 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT FA L+ LV+S + +++V TQP RPAG RG V + A + +LP
Sbjct: 1 MKIVFMGTPAFAAQFLEHLVASDNEVLAVVTQPDRPAG-RGRVLTPPPVKEAALKHNLPV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L PT L E+E L VV ++P+ IL TK G N H SLLP++RGAAP+
Sbjct: 60 LQPTDLKSPEFEADLRKYDADLYVVVAYSILPKNILGITKFGAVNVHGSLLPKYRGAAPV 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI G NETG+ + ++D+ +D GP+ R V I TA L ++ V A+ +A+
Sbjct: 120 QRAIADGLNETGVTVFRLDEKMDHGPILAQRTVVIDHQDTTASLLDKMVVPGCDALDDAL 179
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
++L+ Q + A KI K E ++F A +H+ IRA +P+PG + ++
Sbjct: 180 NQLKNGCEKDLTQDHAQASGAPKIKKEEGLIDFNLPARTIHDRIRAFNPWPGGYGKLGGR 239
Query: 243 NKHERIKLLESQLVEGEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ R ++ + PG E + + +G + ++ +Q G + + + DF+ G
Sbjct: 240 MVYLRQT--DTPENGPKLAPGVVEFKDNRLFVGTGEGVLEVIEIQAEGKKPMPVADFMRG 297
Query: 301 CPVIIGCIV 309
G
Sbjct: 298 IQKREGLQF 306
>gi|167037731|ref|YP_001665309.1| methionyl-tRNA formyltransferase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|166856565|gb|ABY94973.1| methionyl-tRNA formyltransferase [Thermoanaerobacter
pseudethanolicus ATCC 33223]
Length = 310
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 107/313 (34%), Positives = 171/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L++VFMGT EFAV +LQ L + + +V TQP + G RG+K S V + A + +
Sbjct: 2 LKIVFMGTPEFAVPSLQKLFEEGYDVAAVVTQPDKQKG-RGMKFSFSPVKEVALQKGVEI 60
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K+ N D VVVAYG ++P+ IL K G N HASLLP++RGAA
Sbjct: 61 LQPEKIKNNPEFLNRLEVINPDAIVVVAYGKILPEEILTLPKYGCINVHASLLPKYRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ ETGI M MDK LDTG + + +PI + L +LS L A ++E
Sbjct: 121 PINWAIINGEKETGITTMLMDKGLDTGDMLIKKSIPILEEDDAETLHDKLSRLGAEVLIE 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ LE+ +L Q E +Y+ ++K +++ ++AE + N IR + P+PG +
Sbjct: 181 TLKGLEKGSLTPVKQREEEASYSPILTKEMGHIDWNKTAEEIRNLIRGMKPWPGCYTFYG 240
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ + ++VE G + G V+ + + C + A++I+ +Q+ G + + I +
Sbjct: 241 D----KMLKIWKGEIVEYNGNEENGTVLKSKGDLIVKCDKDALKIVEIQQEGSKKMGIRE 296
Query: 297 FLLGCPVIIGCIV 309
+L+G + G I
Sbjct: 297 YLIGHNIPEGTIF 309
>gi|182420427|ref|ZP_02951646.1| methionyl-tRNA formyltransferase [Clostridium butyricum 5521]
gi|237668344|ref|ZP_04528328.1| methionyl-tRNA formyltransferase [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182375713|gb|EDT73313.1| methionyl-tRNA formyltransferase [Clostridium butyricum 5521]
gi|237656692|gb|EEP54248.1| methionyl-tRNA formyltransferase [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 308
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 91/315 (28%), Positives = 163/315 (51%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT +FAV +L+ L+ H++ ++ TQP +P G RG K SAV ++ + +P
Sbjct: 1 MNIVFMGTPDFAVPSLKRLIE-KHNVTAILTQPDKPKG-RGKKMAYSAVKEEGLKHDIPI 58
Query: 63 LVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL ++ E+ D +VVA+G ++ + +L+ K G N H SLLP +RGAA
Sbjct: 59 YQPVKLKEDRELIEKLKDIKPDFMIVVAFGQILTKEVLDIPKYGCINLHGSLLPMYRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ G+ +G M MD LDTG + +V I ++ L L + +++
Sbjct: 119 PIQWAVIKGEKVSGNTTMLMDVGLDTGDMLMKDEVEIPDDMTAGELYDILKERGSDLLLQ 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + N + Q + +++ ++A+ +HN IR L+P+P A+ +
Sbjct: 179 TIDGVINNTIVPQKQNDETFYAKMLDKNIAV-ISWDKTAKEIHNLIRGLNPWPIAYTDYK 237
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ER+K+ ES++++ + PG +I +AC + I ++Q + L I
Sbjct: 238 ----NERMKIFESEVIDDKTSKCPGTIIEVTKEGMKVACKDSVLLIKKVQFPNKKPLTIA 293
Query: 296 DFLLGCPVIIGCIVG 310
+++ G + I+G
Sbjct: 294 EYINGHEIEENIILG 308
>gi|29655280|ref|NP_820972.1| methionyl-tRNA formyltransferase [Coxiella burnetii RSA 493]
gi|154706101|ref|YP_001425401.1| methionyl-tRNA formyltransferase [Coxiella burnetii Dugway
5J108-111]
gi|161831370|ref|YP_001595981.1| methionyl-tRNA formyltransferase [Coxiella burnetii RSA 331]
gi|212213456|ref|YP_002304392.1| methionyl-tRNA formyltransferase [Coxiella burnetii CbuG_Q212]
gi|33516855|sp|Q83AA8|FMT_COXBU RecName: Full=Methionyl-tRNA formyltransferase
gi|189044506|sp|A9KH14|FMT_COXBN RecName: Full=Methionyl-tRNA formyltransferase
gi|189044507|sp|A9N9H5|FMT_COXBR RecName: Full=Methionyl-tRNA formyltransferase
gi|238065948|sp|B6J3C2|FMT_COXB2 RecName: Full=Methionyl-tRNA formyltransferase
gi|29542552|gb|AAO91486.1| methionyl-tRNA formyltransferase [Coxiella burnetii RSA 493]
gi|154355387|gb|ABS76849.1| methionyl-tRNA formyltransferase [Coxiella burnetii Dugway
5J108-111]
gi|161763237|gb|ABX78879.1| methionyl-tRNA formyltransferase [Coxiella burnetii RSA 331]
gi|212011866|gb|ACJ19247.1| methionyl-tRNA formyltransferase [Coxiella burnetii CbuG_Q212]
Length = 314
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 133/319 (41%), Positives = 196/319 (61%), Gaps = 14/319 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+L++VF GT +FAV TL+AL+ SSH +++VYTQP RP+G RG K + S V + A++ +
Sbjct: 1 MSLKIVFAGTPQFAVPTLRALIDSSHRVLAVYTQPDRPSG-RGQKIMESPVKEIARQNEI 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P + E E+ ++ NADV VVVAYGL++P++ LNA +LG N HASLLPRWRGA
Sbjct: 60 PIIQPFSLRDEVEQEKLIAMNADVMVVVAYGLILPKKALNAFRLGCVNVHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI+AGD ETGI+IM+M++ LDTG V ISS A L LS++ A ++
Sbjct: 120 APIQRAILAGDRETGISIMQMNEGLDTGDVLAKSACVISSEDTAADLHDRLSLIGADLLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E++ KLE+ ++ L Q E TYA KI K E +++ +SA + +RA +P P A+
Sbjct: 180 ESLAKLEKGDIKLEKQDEASATYASKIQKQEALIDWRKSAVEIARQVRAFNPTPIAFTYF 239
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
++ + +V+ + +PG ++ +IA G +R+ +LQ G RV
Sbjct: 240 EGQPM----RIWRATVVDEKTDFEPGVLVDADKKGISIAAGSGILRLHQLQLPGKRVCSA 295
Query: 295 GDFLL--GCPVIIG-CIVG 310
GDF+ G +I G + G
Sbjct: 296 GDFINAHGDKLIPGKTVFG 314
>gi|212632965|ref|YP_002309490.1| methionyl-tRNA formyltransferase [Shewanella piezotolerans WP3]
gi|226704304|sp|B8CHB1|FMT_SHEPW RecName: Full=Methionyl-tRNA formyltransferase
gi|212554449|gb|ACJ26903.1| Methionyl-tRNA formyltransferase [Shewanella piezotolerans WP3]
Length = 321
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 119/316 (37%), Positives = 173/316 (54%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L V+F GT +FA LQAL+ S H +++VYTQP RPAG RG K S V A E +P
Sbjct: 3 PLNVIFAGTPDFAARHLQALIESQHKVIAVYTQPDRPAG-RGKKLQSSPVKALALENDIP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + ++ + NAD+ VVVAYGL++P+ +L+ +LG N H S+LPRWRGAA
Sbjct: 62 VLQPKSLRDETAQQELTALNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ IM+MD LDTG + ++ I +A L ++L+ A+VE
Sbjct: 122 PIQRALWAGDAETGVTIMQMDIGLDTGDMLLKTQLKIEDTDTSATLYEKLADQGPSALVE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ + + LP Q E+ YAEK+SK E ++++ +SAE + IRA +P+P +
Sbjct: 182 ALAGIAADTLPAEKQDESLANYAEKLSKEEAQIDWSKSAEALWREIRAFNPWPVSH---- 237
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S + E G VI +A G + I +Q G + L +
Sbjct: 238 YQHAGNTIKVWQSHVSEKTSTAAAGTVISADKNGIDVATGNGVLTITSMQLPGKKPLSVA 297
Query: 296 DFLLGCP--VIIGCIV 309
D L G +
Sbjct: 298 DILNSRADWFTAGTQL 313
>gi|110801608|ref|YP_699029.1| methionyl-tRNA formyltransferase [Clostridium perfringens SM101]
gi|122956627|sp|Q0SS78|FMT_CLOPS RecName: Full=Methionyl-tRNA formyltransferase
gi|110682109|gb|ABG85479.1| methionyl-tRNA formyltransferase [Clostridium perfringens SM101]
Length = 309
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 92/312 (29%), Positives = 162/312 (51%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV +L++L+ + + +V+TQP RP G RG K +S V + A E ++P
Sbjct: 1 MKIVFMGTPDFAVPSLKSLI-NEFGVEAVFTQPDRPKG-RGKKLGMSPVKEVALEHNIPV 58
Query: 63 LVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E E+ + D +VVA+G ++P+ +L+ K G N HASLLP++RGAA
Sbjct: 59 YQPLRLKNEPETIEELKNMEPDFIIVVAFGQILPKEVLDIPKYGCINLHASLLPKFRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ +I+ G+ TG M MD LDTG + +V I+ N+ L L +V
Sbjct: 119 PLNWSIIKGEKVTGNTTMLMDVGLDTGDMLLKDEVEITDNMTAGELHDILMERGGELLVR 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + N + Q E YA ++K ++++ SA+++HN +R L+P+P A
Sbjct: 179 TIKGILNNEITPEKQNEEETCYAPMLNKEIAKIDWSLSAQDIHNLVRGLNPWPVALTSY- 237
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ ++ + E +PG +I ++ + + I +LQ + L + F
Sbjct: 238 -DDITMKVHQTRVEKGESNKEPGTIIAVDKTGIKVSTGKDILVIEKLQFPNSKQLFVEQF 296
Query: 298 LLGCPVIIGCIV 309
+ G + +G ++
Sbjct: 297 INGNTIEVGKVL 308
>gi|307822765|ref|ZP_07652996.1| methionyl-tRNA formyltransferase [Methylobacter tundripaludum SV96]
gi|307736369|gb|EFO07215.1| methionyl-tRNA formyltransferase [Methylobacter tundripaludum SV96]
Length = 309
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 114/315 (36%), Positives = 176/315 (55%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFAV LQ L+ S H I +VYTQP RPAG RG K S V + A +P
Sbjct: 1 MKIIFAGTPEFAVPCLQMLLDSEHEICAVYTQPDRPAG-RGRKLQPSPVKELALTAGIPV 59
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P T E+ +Q +FNAD+ VVVAYG+++ Q +L+ KLG N HASLLPRWRGAAP
Sbjct: 60 FQPLTMKTSEDLQQISAFNADLMVVVAYGMILTQAVLDVPKLGCINVHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+MAGD +TG+ IM++ + LD G + + I L +L+VL A + +
Sbjct: 120 IQRALMAGDEKTGVTIMQIVRKLDAGDMLHKEECMIGPTDTAVDLHDKLAVLGAIGLAKV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++E + Q E +TYAEK+ K E V++ + A ++ +R L+ +P A
Sbjct: 180 LKQIEAGTVHPERQDEALVTYAEKLEKSEAVVDWTQPAMDIARKVRGLNAWPVAQTLYQG 239
Query: 242 GNKHERIKLLESQLVEGE----GKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+++ +++ VE + + G V + + +A G +R++ +Q GG+ + +
Sbjct: 240 N----VLRIWQAEPVEDDVSLQLESGVVRCADKHMDVATGAGFLRLLEVQLPGGKRMPVQ 295
Query: 296 DFLLGCPVIIGCIVG 310
FL V G +G
Sbjct: 296 AFLSAHDVN-GVKLG 309
>gi|163756384|ref|ZP_02163498.1| methionyl-tRNA formyltransferase [Kordia algicida OT-1]
gi|161323736|gb|EDP95071.1| methionyl-tRNA formyltransferase [Kordia algicida OT-1]
Length = 315
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 100/308 (32%), Positives = 165/308 (53%), Gaps = 6/308 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT +FAVATL+AL+ +++++V V T P +PAG RG K SAV K A +L
Sbjct: 4 LRIVFMGTPDFAVATLKALLDANYNVVGVITAPDKPAG-RGRKMHQSAVKKFALANNLNV 62
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L PT L + + + L +V ++P+ + + G +N HASLLP +RGAAPI
Sbjct: 63 LQPTNLKRTSFVEELKALNANLQIVVAFRMLPKVVWQMPEYGTFNLHASLLPNYRGAAPI 122
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ +TG+ +D+ +DTG + F ++ I N L +L + + +V+ +
Sbjct: 123 NWAIINGETKTGVTTFFIDEKIDTGAMIFQEEIAIEPTENAGSLHDKLMNIGSDLVVKTV 182
Query: 183 DKLEQNNLPLSPQ-IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+E++ + + Q + + A KI K ++++ + +N++N IR LSP+P +W +
Sbjct: 183 QHIEKDEVTTTIQPNSDDVKTAYKIHKETCKIDWTDTIDNIYNKIRGLSPYPASWTTLHN 242
Query: 242 GNKHERIKLLESQLV--EGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
G+ IK+ E + V G V+ IA +G + + LQ G R ++IG
Sbjct: 243 GDDTYNIKIYEVEKVLEAHSHTVGIVLSSKKEVKIAVKEGYIILKILQLPGKRSMEIGAL 302
Query: 298 LLGCPVII 305
L G
Sbjct: 303 LNGFNFEK 310
>gi|322516390|ref|ZP_08069315.1| methionyl-tRNA formyltransferase [Streptococcus vestibularis ATCC
49124]
gi|322125123|gb|EFX96516.1| methionyl-tRNA formyltransferase [Streptococcus vestibularis ATCC
49124]
Length = 311
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 101/316 (31%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT ++VFMGT F+ L+ L+ + IV+V TQP R G R + ++ V + A
Sbjct: 1 MT-KIVFMGTPAFSATVLEGLLTDERYDIVAVVTQPDRAVG-RKKEIRMTPVKEVALAHD 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL E L +V A L + N HASLLP++RG
Sbjct: 59 LPIYQPEKLSGSEEMAQLMSLGADGIVTAAYGQFLPSKLLDSMDFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ GD E G+ IM+M K +D G + + +PI N + ++L+VL ++
Sbjct: 119 APIHYAIINGDAEAGVTIMEMVKEMDAGDMVSQKALPILDQDNVGTMFEKLAVLGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + PQ + +T++ IS E R+++ +SA ++ N IR + P+P A +
Sbjct: 179 ETLPAYIAGEIKPVPQDASQVTFSPNISPEEERLDWNKSARDIFNQIRGMYPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E LVEG+G+ G +I + +A QGA+ + +Q AG + I D
Sbjct: 239 ----DGKRFKIYEGDLVEGQGQAGHIIEKTKKSLVVATGQGAISLKSVQPAGKPRMAIVD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRNLEVGDAFG 310
>gi|150008368|ref|YP_001303111.1| methionyl-tRNA formyltransferase [Parabacteroides distasonis ATCC
8503]
gi|298375016|ref|ZP_06984973.1| methionyl-tRNA formyltransferase [Bacteroides sp. 3_1_19]
gi|166215493|sp|A6LCS5|FMT_PARD8 RecName: Full=Methionyl-tRNA formyltransferase
gi|149936792|gb|ABR43489.1| methionyl-tRNA formyltransferase [Parabacteroides distasonis ATCC
8503]
gi|298267516|gb|EFI09172.1| methionyl-tRNA formyltransferase [Bacteroides sp. 3_1_19]
Length = 324
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 100/316 (31%), Positives = 161/316 (50%), Gaps = 14/316 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV +L+ALV +++V V T P +P GR G SAV + A
Sbjct: 1 MKKEDLRIVYMGTPDFAVESLRALVEGGYNVVGVITMPDKPMGRHGSVLQPSAVKQYAVS 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P KL E + + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 61 VGLPVLQPEKLKDEAFLEELRALRADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETG+ + +DTG + R +PI+ + + L + A
Sbjct: 121 GAAPINWAVINGDTETGVTTFFLTHEIDTGKIIRQRHLPIADTDDVETVHDALMAMGARL 180
Query: 178 MVEAMDKLEQNNLPLSPQ-----IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ E +D L PQ + A KI K +++ + +N+++ +R LSP+
Sbjct: 181 VTETVDLLLDGKTDAIPQEEFYKDAAELRPAPKIFKDTCHIDWNQPVKNIYDFVRGLSPY 240
Query: 233 PGAWLEMMIGN-KHERIKLLESQ--LVEGEGKPGEVINPN---FTIACSQGAVRIMRLQR 286
P AW E++ + K +K+ +++ E G + + +A G +R+ LQ
Sbjct: 241 PAAWTELISEDGKRLALKIYQAEKRPAEHNFPVGSIHTDHKSYIDVAVKDGFLRLRSLQL 300
Query: 287 AGGRVLDIGDFLLGCP 302
AG + ++I DFL G
Sbjct: 301 AGKKRMNITDFLNGFK 316
>gi|332201158|gb|EGJ15229.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae GA47901]
Length = 311
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 91/316 (28%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL + L +V A L + N HASLLPR RG
Sbjct: 59 LSIYQPEKLSGSPEMEDLMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGDIKPEPQDTSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG ++I
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMEIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|284035973|ref|YP_003385903.1| methionyl-tRNA formyltransferase [Spirosoma linguale DSM 74]
gi|283815266|gb|ADB37104.1| methionyl-tRNA formyltransferase [Spirosoma linguale DSM 74]
Length = 312
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 98/310 (31%), Positives = 161/310 (51%), Gaps = 13/310 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++FMGT +FAVA+LQ L+ + +V+V T P RP+G RGL+ S V K A+ +LP
Sbjct: 4 PLRIIFMGTPDFAVASLQRLLGAGLQVVAVVTAPDRPSG-RGLQLTPSPVKKAAEAANLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P KL + + L+ VV ++P+ + +G +N H SLLP++RGAAP
Sbjct: 63 VLQPEKLRDAAFLEQLASYQADLQVVVAFRMLPEVVWAMPTIGTFNLHGSLLPQYRGAAP 122
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ ETG+ ++K +DTG + F PI + + L A+ +V+
Sbjct: 123 INWAIINGETETGVTTFFIEKEIDTGQMIFQDYEPIYPDDTAGTVHDRLMERGANLVVKT 182
Query: 182 MDKLEQNNLPLSPQIE-NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +E + P +PQ + + A K+S+ T +N+ + A + N +R LSP+P AW ++
Sbjct: 183 VHAIEAGDYPRTPQPTADDLRPAPKLSRETTEINWNQPATQIRNFVRGLSPYPTAWTKI- 241
Query: 241 IGNKHERIKLLESQLVEGE----GKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLD 293
+ K+ + +PGE + N + + G ++I LQ G R +
Sbjct: 242 ---NGKVFKIYGVSVANESPFAAEQPGEAYSDNKKIILVRAADGWLQIDALQAEGKRRMT 298
Query: 294 IGDFLLGCPV 303
+FL G +
Sbjct: 299 AEEFLRGNRL 308
>gi|297583986|ref|YP_003699766.1| methionyl-tRNA formyltransferase [Bacillus selenitireducens MLS10]
gi|297142443|gb|ADH99200.1| methionyl-tRNA formyltransferase [Bacillus selenitireducens MLS10]
Length = 317
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 111/317 (35%), Positives = 170/317 (53%), Gaps = 14/317 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMGT +F+V L+ L S + +V V TQP RP G R + V A++ L
Sbjct: 1 MKVIFMGTPDFSVPVLEGLCESGYDVVMVVTQPDRPKG-RKKQLTPPPVKVAAEKRGLSV 59
Query: 63 LVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ + + + + +AD+ V AYG ++P+ IL +T+LG N HASLLP +RG AP
Sbjct: 60 YQPEKIRDPKEAEHVLAADADLLVTAAYGQILPKEILESTRLGCINVHASLLPEYRGGAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I +A++ G N+TGI IM M + LD G + R+ PI+ T + LS + A ++E
Sbjct: 120 IHQAVIDGKNKTGITIMYMVEKLDAGDILTQRETPITDEDTTGTMHDRLSRIGAELLLET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L L Q E +T+A I K + RV+F +SA V NHIR L+P+P A +
Sbjct: 180 IPRLAAGELSPRRQDEEKVTFASNIKKEQERVDFSQSARAVFNHIRGLNPWPVAHTLL-- 237
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQ-GAVRIMRLQRAGGRVLDIG 295
+R+KL +S VE PGE++ +AC +R+ +LQ G + +D
Sbjct: 238 --DGKRLKLWDSVEVEEHTAAAPGEIVALSKSGVDVACGNRSIIRLTKLQPQGKKPMDAA 295
Query: 296 DFLLGC--PVIIGCIVG 310
FL G + G +G
Sbjct: 296 TFLQGAGKNLEPGHRLG 312
>gi|239978383|ref|ZP_04700907.1| methionyl-tRNA formyltransferase [Streptomyces albus J1074]
gi|291450279|ref|ZP_06589669.1| methionyl-tRNA formyltransferase [Streptomyces albus J1074]
gi|291353228|gb|EFE80130.1| methionyl-tRNA formyltransferase [Streptomyces albus J1074]
Length = 314
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 103/314 (32%), Positives = 162/314 (51%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E AV L AL++S H +V+V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MRLVFAGTPEVAVPALDALIASERHEVVAVVTRPDAPAG-RGRRLVASPVAERAEEAGIE 59
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + EE+ D VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 60 VLKPNRPRDEEFLARLREIGPDCCPVVAYGALLPKAALDIPARGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI+AGD TG + +++ LD+GPV + + L L+ + +
Sbjct: 120 PVQHAILAGDQITGASTFLIEEGLDSGPVFGTVTEEVRPTDTSGDLLTRLAFAGSGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ +GI+ A K++ + +V++ A V +R +P PGAW
Sbjct: 180 TMDGIEDGTLQAVPQPADGISLAPKLTVEDAQVDWAAPALRVDRVVRGCTPAPGAWTVF- 238
Query: 241 IGNKHERIKLLESQLVEGEG--KPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+KL+ ++ + GE PG+ V + + AV ++ +Q G + + D
Sbjct: 239 ---RGERLKLVAARPLPGEEGLAPGDLAVGKNHVHVGTGSHAVELLWVQPQGKKPMRAAD 295
Query: 297 FLLGCPVIIGCIVG 310
+ G + G +G
Sbjct: 296 WARGVRIAPGERLG 309
>gi|94264679|ref|ZP_01288461.1| Methionyl-tRNA formyltransferase [delta proteobacterium MLMS-1]
gi|93454910|gb|EAT05154.1| Methionyl-tRNA formyltransferase [delta proteobacterium MLMS-1]
Length = 317
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 110/312 (35%), Positives = 163/312 (52%), Gaps = 9/312 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT EFAV L AL++ +V+V TQP +P G R K V + AQ +P
Sbjct: 6 PLRIIFFGTPEFAVPPLTALLAHGEEVVAVVTQPDKPKG-RSKKLCPPPVKELAQSSGIP 64
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K+ E++ D+ VV AYG ++P +LN LG N H SLLP +RGAA
Sbjct: 65 VLQPAKIKGEDFLATIGELKPDLLVVAAYGRILPGALLNLPPLGTINIHGSLLPAYRGAA 124
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI+ G+ ETG+ IM+MD+ +DTG + R++ I+ + T L +++ L A+VE
Sbjct: 125 PMQWAILNGEQETGVTIMQMDEGMDTGAILLQRRLTINDDDTTGSLAAKMAPLGGEALVE 184
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ L+ LP PQ +N T A + K +++ +SA + IRAL P+P A +
Sbjct: 185 ALELLKAGKLPPQPQDDNLATLAPPLCKTMAAIDWRQSAARISCQIRALDPWPLARTTLG 244
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI----NPNFT-IACSQGAVRIMRLQRAGGRVLDIG 295
R+ +PG V N IA QG + + +QR GG+ L +
Sbjct: 245 --EHPVRLFKPRVADEPAGAEPGTVTVANPENNLLGIATGQGCLLVGEIQREGGKRLTVE 302
Query: 296 DFLLGCPVIIGC 307
FL G + G
Sbjct: 303 AFLRGHRIKPGD 314
>gi|307704311|ref|ZP_07641229.1| methionyl-tRNA formyltransferase [Streptococcus mitis SK597]
gi|307622147|gb|EFO01166.1| methionyl-tRNA formyltransferase [Streptococcus mitis SK597]
Length = 311
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 156/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL + L +V A L + N HASLLP+ RG
Sbjct: 59 LSIYQPEKLSGSPEMEELMKLGADGIVTAAFGQFLPSKLLDSMAFAVNVHASLLPKHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ + +T++ I E ++++ +S + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGEIKPEPQDPSRVTFSPNIKPEEEKLDWTKSNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALAVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|288941788|ref|YP_003444028.1| methionyl-tRNA formyltransferase [Allochromatium vinosum DSM 180]
gi|288897160|gb|ADC62996.1| methionyl-tRNA formyltransferase [Allochromatium vinosum DSM 180]
Length = 315
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 121/314 (38%), Positives = 166/314 (52%), Gaps = 8/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT +FAV L AL+ + H ++ VYTQP RPAG RG K +S V A + L
Sbjct: 3 PLRLLFAGTPDFAVPCLAALLDAGHEVIGVYTQPDRPAG-RGRKLQMSPVKALALDRGLA 61
Query: 62 ALVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K E EQ + AD+ VVVAYGL++P +L A +LG N HASLLPRWRGA
Sbjct: 62 VYQPESLKRDPEAVEQLRALGADLMVVVAYGLLLPVSVLEAPRLGCVNVHASLLPRWRGA 121
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI+AGD ETG+ IM+M+ LDTGPV PI L L+ L A A+V
Sbjct: 122 APIQRAILAGDAETGVCIMRMEAGLDTGPVYHRVATPIDPRETGGTLHDRLAELGARALV 181
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+A+ + + + Q + TYA K+SK E +++ A+ + +RA P+P A +
Sbjct: 182 DALPGIAEGSRAPDAQDDALATYAHKLSKDEATIDWSAPADAIERQVRAFDPWPVAQTTL 241
Query: 240 MIGNKHERIKLLESQLVEGE-GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
ES+ G+ PG VI +A G + + RLQ AG + +
Sbjct: 242 EGATLRIWSAEAESEDAAGDSAAPGTVIGADRTGIRVATGAGRLCVTRLQPAGKKPMSAA 301
Query: 296 DFLLGCPVIIGCIV 309
D+L + G
Sbjct: 302 DYLNARHLD-GARF 314
>gi|222153509|ref|YP_002562686.1| methionyl-tRNA formyltransferase [Streptococcus uberis 0140J]
gi|254789374|sp|B9DV45|FMT_STRU0 RecName: Full=Methionyl-tRNA formyltransferase
gi|222114322|emb|CAR43002.1| methionyl-tRNA formyltransferase [Streptococcus uberis 0140J]
Length = 311
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 89/316 (28%), Positives = 154/316 (48%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + + +++V TQP R G R + +S V + A E
Sbjct: 1 MT-KIIFMGTPDFSATVLKGLIENPSYQLLAVVTQPDRAVG-RKKEIKMSPVKEVALEHH 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P KL + + + +V A L + N HASLLP++RG
Sbjct: 59 IPVYQPEKLSGSQELESIMSLDADGIVTAAFGQFLPTKLLDSVTFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ G+ E G+ IM+M K +D G + PI + N + +L++L ++
Sbjct: 119 APIHYALINGEEEAGVTIMEMVKEMDAGDMIAKASTPILEDDNVGTMFDKLAILGRDLLI 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + L Q T++ I+ + +++F +SA + N +R ++P+P A
Sbjct: 179 KTLPDYLSGQLKPVAQNHAEATFSPNITSEQEKLDFTKSARAIFNQVRGMNPWPIAHTYF 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
ER K+ E +EG+G PG+VI + +A GAV + +Q +G + I D
Sbjct: 239 ----NGERFKIYELLAIEGQGAPGQVIEKTKDSLIVATGSGAVSLRVVQPSGKPKMTIKD 294
Query: 297 FLLGCP--VIIGCIVG 310
+L G + +G G
Sbjct: 295 YLNGLGRDIKVGDYFG 310
>gi|322386006|ref|ZP_08059646.1| methionyl-tRNA formyltransferase [Streptococcus cristatus ATCC
51100]
gi|321269989|gb|EFX52909.1| methionyl-tRNA formyltransferase [Streptococcus cristatus ATCC
51100]
Length = 312
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 11/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT++++FMGT +F+ L+ L+ S + I++V TQP R G R + ++ V + A
Sbjct: 1 MTVKLIFMGTPDFSATVLKGLLESEQYEILAVVTQPDRAVG-RKKEIRMTPVKEVALANG 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + + +V A L + N HASLLP++RG
Sbjct: 60 LPVYQPEKLAKSADLEEIMNLGADGIVTAAFGQFLPSRLLDSVNFAVNVHASLLPKYRGG 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R I + N L ++L+V+ ++
Sbjct: 120 APIHYALINGDQEAGVTIMEMVKEMDAGDMIASRATAIEESDNVGTLFEKLAVIGRDLLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + PQ +T++ IS + R+++ +++ + N +R ++P+P A +
Sbjct: 180 EVLPAYVAGEIQAHPQDPELVTFSPNISPEQERIDWTKTSRQIFNQVRGMNPWPVAHTLL 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E EG G+PGE++ +A QGA+ + +Q G +DI D
Sbjct: 240 AG----QRFKIYEVSQAEGSGRPGEILTISKKELVVAAGQGALSLKTVQPFGKPKMDIKD 295
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 296 FLNGLGRSLAVGDEFG 311
>gi|256839342|ref|ZP_05544851.1| methionyl-tRNA formyltransferase [Parabacteroides sp. D13]
gi|256738272|gb|EEU51597.1| methionyl-tRNA formyltransferase [Parabacteroides sp. D13]
Length = 326
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 101/316 (31%), Positives = 162/316 (51%), Gaps = 14/316 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV +L+ALV +++V V T P +P GR G SAV + A
Sbjct: 3 MKKEDLRIVYMGTPDFAVESLRALVEGGYNVVGVITMPDKPMGRHGSVLQPSAVKQYAVS 62
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P KL E + + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 63 VGLPVLQPEKLKDEAFLEELRALRADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 122
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETG+ + +DTG + R +PI+ + + L V+ A
Sbjct: 123 GAAPINWAVINGDTETGVTTFFLTHEIDTGKIIRQRHLPIADTDDVETVHDALMVMGAGL 182
Query: 178 MVEAMDKLEQNNLPLSPQ-----IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ E +D L PQ + A KI K +++ + +N+++ +R LSP+
Sbjct: 183 VTETVDLLLDGKTDAIPQEEFYKDAAELRPAPKIFKDTCHIDWNQPVKNIYDFVRGLSPY 242
Query: 233 PGAWLEMMIGN-KHERIKLLESQ--LVEGEGKPGEVINPN---FTIACSQGAVRIMRLQR 286
P AW E++ + K +K+ +++ E G + + +A G +R+ LQ
Sbjct: 243 PAAWTELISEDGKRLALKIYQAEKRPAEHNFPVGSIHTDHKSYIDVAVKDGFLRLRSLQL 302
Query: 287 AGGRVLDIGDFLLGCP 302
AG + ++I DFL G
Sbjct: 303 AGKKRMNITDFLNGFK 318
>gi|255015616|ref|ZP_05287742.1| methionyl-tRNA formyltransferase [Bacteroides sp. 2_1_7]
Length = 324
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 101/316 (31%), Positives = 162/316 (51%), Gaps = 14/316 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV +L+ALV +++V V T P +P GR G SAV + A
Sbjct: 1 MKKEDLRIVYMGTPDFAVESLRALVEGGYNVVGVITMPDKPMGRHGSVLQPSAVKQYAVS 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P KL E + + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 61 VGLPVLQPEKLKDEAFLEELRALRADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETG+ + +DTG + R +PI+ + + L V+ A
Sbjct: 121 GAAPINWAVINGDTETGVTTFFLTHEIDTGKIIRQRHLPIADTDDVETVHDALMVMGAGL 180
Query: 178 MVEAMDKLEQNNLPLSPQ-----IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ E +D L PQ + A KI K +++ + +N+++ +R LSP+
Sbjct: 181 VTETVDLLLDGKTDAIPQEEFYKDAAELRPAPKIFKDTCHIDWNQPVKNIYDFVRGLSPY 240
Query: 233 PGAWLEMMIGN-KHERIKLLESQ--LVEGEGKPGEVINPN---FTIACSQGAVRIMRLQR 286
P AW E++ + K +K+ +++ E G + + +A G +R+ LQ
Sbjct: 241 PAAWTELISEDGKRLALKIYQAEKRPAEHNFPVGSIHTDHKSYIDVAVKDGFLRLRSLQL 300
Query: 287 AGGRVLDIGDFLLGCP 302
AG + ++I DFL G
Sbjct: 301 AGKKRMNITDFLNGFK 316
>gi|126726107|ref|ZP_01741949.1| methionyl-tRNA formyl transferase [Rhodobacterales bacterium
HTCC2150]
gi|126705311|gb|EBA04402.1| methionyl-tRNA formyl transferase [Rhodobacterales bacterium
HTCC2150]
Length = 299
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 135/304 (44%), Positives = 182/304 (59%), Gaps = 9/304 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +F+V L ALV + H IV+VY+QP RPAG RG K + V +A+ L
Sbjct: 1 MKIVFMGTPDFSVPALDALVDAEHEIVAVYSQPARPAG-RGKKMRDTPVAARAKILGLNV 59
Query: 63 LVPTKLGQE-EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + +FL+ +ADVAVVVAYGL++PQ IL+ K G N HASLLPRWRGAAP
Sbjct: 60 YTPLNFKSDAAIAEFLAHDADVAVVVAYGLILPQVILDGPKRGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD+ +G+AIM+M+ LDTGPV + + I + T L L+ + A M E
Sbjct: 120 IHRAIMAGDSHSGVAIMQMEAGLDTGPVLMVEETTIGPSETTGDLHDRLAQIGAGLMEEV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L+ Q E G+TYA KI KGE R+++ +SA+ + IR LSPFPGAW E
Sbjct: 180 LLSLDHITPNA--QPELGVTYAHKIDKGEARIDWAKSAQEIDQQIRGLSPFPGAWCE--- 234
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ERIK+L S V+ EG G V + C GA++I+ QR G + + +FL G
Sbjct: 235 -ADGERIKILRSSCVDQEGPIGAVFGD-LIVTCGTGAIQILAAQRPGKKPQNAAEFLNGF 292
Query: 302 PVII 305
+
Sbjct: 293 SIPE 296
>gi|182625882|ref|ZP_02953648.1| methionyl-tRNA formyltransferase [Clostridium perfringens D str.
JGS1721]
gi|177908916|gb|EDT71408.1| methionyl-tRNA formyltransferase [Clostridium perfringens D str.
JGS1721]
Length = 309
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 94/312 (30%), Positives = 162/312 (51%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV +L++L+ + + +V+TQP RP G RG K +S V + A E ++P
Sbjct: 1 MKIVFMGTPDFAVPSLKSLI-NEFGVEAVFTQPDRPKG-RGKKLGMSPVKEVALEHNIPV 58
Query: 63 LVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E E+ + D +VVA+G ++P+ +L+ K G N HASLLP++RGAA
Sbjct: 59 YQPLRLKNEPETIEELKNMEPDFIIVVAFGQILPKEVLDIPKYGCINLHASLLPKFRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ +I+ G+ TG M MD LDTG + +V I+ N+ L L +V
Sbjct: 119 PLNWSIIKGEKVTGNTTMLMDVGLDTGDMLLKDEVEITDNMTAGELHDILMERGGELLVR 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + N + Q E YA ++K ++++ SA+++HN +R L+P+P A
Sbjct: 179 TIKGILNNEITPEKQNEEETCYASMLNKEIAKIDWSLSAQDIHNLVRGLNPWPVALTSY- 237
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ ++ + E +PG +I ++ + + I +LQ + L + F
Sbjct: 238 -DHITMKVHQTRVEKGESNKEPGTIIAVDKTGIKVSTGKDILVIEKLQFPNSKQLFVEQF 296
Query: 298 LLGCPVIIGCIV 309
+ G V IG ++
Sbjct: 297 INGNSVEIGKVL 308
>gi|302035776|ref|YP_003796098.1| methionyl-tRNA formyltransferase [Candidatus Nitrospira defluvii]
gi|300603840|emb|CBK40172.1| Methionyl-tRNA formyltransferase [Candidatus Nitrospira defluvii]
Length = 316
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 103/313 (32%), Positives = 152/313 (48%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV +L+AL+ S H +V V TQP RP G RG + V S V Q +P
Sbjct: 1 MRIVFMGTPDFAVPSLEALLKSEHQVVGVVTQPDRPKG-RGQEVVFSPVKIVCQREGIPV 59
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + + DV V AYG ++P IL G N H SLLP++RGA P
Sbjct: 60 LQPLKMKDPAFLDALRHWTPDVIAVTAYGRILPPAILALPPRGCINVHGSLLPKYRGAGP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ AI+ G+ TGI M M + +DTG + V I S+ L L+ + +VE
Sbjct: 120 IQWAIIRGEQVTGITTMFMAEGMDTGDMLLQETVEIRSDDTAGTLAPRLAEVGGRLLVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +LE L PQ + T A + K + V + A + N +R LSP+PGA+ +
Sbjct: 180 LRRLEAGTLTPQPQDDAQATMAPLLKKEDGMVEWTLPATEIANRVRGLSPWPGAYTYV-- 237
Query: 242 GNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
ER L + E PG V +A +G ++++ +Q + R + +
Sbjct: 238 --NGERWGLWRVAVGEEVSGAAPGTVTKVSKDRVEVATGEGTIQLIDIQPSNSRRMTMAQ 295
Query: 297 FLLGCPVIIGCIV 309
+L G + G +
Sbjct: 296 YLAGHRLTEGLTL 308
>gi|315924511|ref|ZP_07920732.1| methionyl-tRNA formyltransferase [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315622215|gb|EFV02175.1| methionyl-tRNA formyltransferase [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 313
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 95/316 (30%), Positives = 151/316 (47%), Gaps = 11/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M RVV MGT++FAV L L S + +V+V QP RP G RG K + ++A E L
Sbjct: 1 MRSRVVVMGTTDFAVPMLNRLTDSDYEVVAVVCQPDRPNG-RGKKMRALPMKQRALELGL 59
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K+ + S D VV AYG ++ Q +L+ G N H SLLP +RGA
Sbjct: 60 SVYQPEKIRNASAIDYLKSMRPDFFVVAAYGQILSQEVLDIPTYGCLNIHGSLLPEYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G E+G+ IMKMD +DTG + + +PI+ + ++ A ++
Sbjct: 120 APIHHAIIDGKAESGVTIMKMDLGMDTGDMLAQKIIPITDTTTVGKMHDAMAKAGADLIL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
M +++ Q TYAEKI K R+++ +S + I P+PGAW +
Sbjct: 180 NVMAQIQNGTAQGIEQDSAKATYAEKIDKNTGRIDWHQSCFQILRRINGTDPWPGAWTTL 239
Query: 240 --MIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLD 293
++L +++ E PG ++ N + G +++ +Q G R +
Sbjct: 240 DGKTFKCFLPVRLPQAEKTEV---PGCIVAADENQGLVVTAGDGYLQLNEIQMPGKRRMR 296
Query: 294 IGDFLLGCPVIIGCIV 309
D+ G + +G ++
Sbjct: 297 ATDYFRGNAIAVGTVL 312
>gi|312898701|ref|ZP_07758091.1| methionyl-tRNA formyltransferase [Megasphaera micronuciformis
F0359]
gi|310620620|gb|EFQ04190.1| methionyl-tRNA formyltransferase [Megasphaera micronuciformis
F0359]
Length = 311
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 100/314 (31%), Positives = 167/314 (53%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT +F+V +L+A+V++ H +V+V TQP + G RG S V +KA E LP
Sbjct: 1 MKILFMGTPDFSVPSLEAVVAAGHEVVAVVTQPDKQRG-RGKTVSFSPVKEKALELGLPV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYG-LVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + E + L+ +VV ++P +IL A G N HASLLP++RGAAP
Sbjct: 60 LQPESVRDESVIKTLTDLQAQIIVVIAYGKILPSQILTAAPYGCINIHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ GD +GI+IMK+D+ +DTG V K+ ++ + T L ++LS+L +++
Sbjct: 120 IQYAVLNGDEYSGISIMKLDEGMDTGDVLLQEKIRLAPDETTGSLFEKLSLLGKDVLLKV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + Q TY +KI K R+N+ A + +R L P PGA+
Sbjct: 180 LADPDSYEKNAVRQNHKAATYTQKIDKSMARINWQEDAIVIERTVRTLEPSPGAYTF--- 236
Query: 242 GNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R+K+ + V+ + PG VI +FT+ GA+++ +Q + +
Sbjct: 237 -WDKKRLKIHGAHAVQASTDNAPGTVISVSKSDFTVQTGAGALKVTSVQPESRKTMTSAQ 295
Query: 297 FLLGCPVIIGCIVG 310
FL + +G ++G
Sbjct: 296 FLQSHDLQVGAVLG 309
>gi|114566757|ref|YP_753911.1| methionyl-tRNA formyltransferase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|122318217|sp|Q0AXL4|FMT_SYNWW RecName: Full=Methionyl-tRNA formyltransferase
gi|114337692|gb|ABI68540.1| methionyl-tRNA formyltransferase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 314
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 106/311 (34%), Positives = 173/311 (55%), Gaps = 4/311 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGTS FA+ +L+AL++S H I V +QP + G RG K + V + A+++ L
Sbjct: 1 MRIVFMGTSHFAIPSLKALIASEHEIAGVVSQPDKQRG-RGRKVTPTPVKEIAEQYKLEL 59
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L E ++ + ++ +VV+YG +IP IL + G N HASLLPR+RGAAP
Sbjct: 60 LQTANIKTPESIKRIKQWKPELIIVVSYGQIIPLSILEYPRHGCINVHASLLPRYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRA+M G +GI IM MD+ LDTG + + + NIN L++ L+ + A +++
Sbjct: 120 VQRALMDGIKSSGITIMFMDEGLDTGDIIMQEAIAVDDNINHGELEKILADMGADLLLQV 179
Query: 182 MDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D+L Q P Q ++ +YA +ISK + +N+ A +HN IRAL+P PGA+ +
Sbjct: 180 VDRLVQGEKLPRVVQDDSQASYAARISKEDEIINWSEPAYAIHNRIRALNPQPGAYSYIN 239
Query: 241 IGNKHERIKLLESQLVEG-EGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ S+ G + EV F + +G + ++ +Q+AG + + +FL
Sbjct: 240 GTKVKIFASKVRSEAGSGVIAEVIEVDKNTFQVQTGEGILEVLEIQKAGKKRMPTSEFLK 299
Query: 300 GCPVIIGCIVG 310
G + G ++G
Sbjct: 300 GFTLHPGVLLG 310
>gi|320355331|ref|YP_004196670.1| methionyl-tRNA formyltransferase [Desulfobulbus propionicus DSM
2032]
gi|320123833|gb|ADW19379.1| methionyl-tRNA formyltransferase [Desulfobulbus propionicus DSM
2032]
Length = 313
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 103/312 (33%), Positives = 153/312 (49%), Gaps = 7/312 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VFMGT +FAV +LQAL+ +V+V QP R G RG V A+ LP
Sbjct: 4 PLRIVFMGTPDFAVPSLQALIDGPEQVVAVVCQPDRQRG-RGKVLSPPPVKVLAERHGLP 62
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + E + Q D+ VVVAYG ++ + +L +LG N H SLLP++RGAA
Sbjct: 63 ILQPDSVRTEVFLTQMRELAPDLVVVVAYGKILSESLLQLPRLGAINVHGSLLPQYRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ G+ ETG+ IM+MD +DTG + + PI L LS L A+V
Sbjct: 123 PIQWAVINGEAETGVTIMQMDAGMDTGDILLIVPTPIGPQETAGELFDRLSQLGGAALVT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+++L+Q LP PQ + A + K +++ A +H IR L P+P A+ +
Sbjct: 183 AVEQLKQGQLPPRPQNHALASMAPMLRKEMGHLDWNLPAARLHCLIRGLDPWPSAYGFI- 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGE---VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
R E V PG V + IA + + + +Q G + + +
Sbjct: 242 -DGTRYRFFSPEIVPVRPADPPGTLCRVDSQGLLIATGEDCLLLRDIQPEGKKRMPVAAC 300
Query: 298 LLGCPVIIGCIV 309
L G + G ++
Sbjct: 301 LHGIRLQPGMVI 312
>gi|255536291|ref|YP_003096662.1| Methionyl-tRNA formyltransferase [Flavobacteriaceae bacterium
3519-10]
gi|255342487|gb|ACU08600.1| Methionyl-tRNA formyltransferase [Flavobacteriaceae bacterium
3519-10]
Length = 318
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 98/308 (31%), Positives = 154/308 (50%), Gaps = 7/308 (2%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L++VF GT EFA +L A+ +S H +V V T + +G RG K S V A E
Sbjct: 1 MKSLKIVFFGTPEFAKTSLAAIHNSHHEVVGVVTVADKASG-RGQKIQQSPVKVFATEND 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL E+ + VV ++P+ + + G +N HASLLP +RGA
Sbjct: 60 LPVFQPEKLKDPEFLDSIRQLNADIFVVVAFRMMPKILFEMPEKGTFNLHASLLPDYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G+ +TG +++ +D G + ++ I N N L L + A ++
Sbjct: 120 APINYAIINGEKKTGATTFFINEKIDKGNILLQDEIEIFPNENAGELHDRLMEMGAQLVI 179
Query: 180 EAMDKLEQNNLPLSPQIE-NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ +D L +N++ PQ E A KI K + R+N+ + VHN IR +SP+P A+
Sbjct: 180 KTLDGLAENSINEMPQPEVANPKNAFKIFKDDLRINWKQDGAKVHNFIRGMSPYPCAFTV 239
Query: 239 MMIGNKHERIKLLESQLVEGEG--KPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ IG + + +K+ + + E E G ++ F I S GA +Q G + +++
Sbjct: 240 LKIGEEQKSLKIFKGKFGEDEHSETAGSLKIDKNTFKIFTSDGAYFPEEIQLEGKKRMNV 299
Query: 295 GDFLLGCP 302
DFL G
Sbjct: 300 KDFLNGFR 307
>gi|311747351|ref|ZP_07721136.1| methionyl-tRNA formyltransferase [Algoriphagus sp. PR1]
gi|311302641|gb|EAZ83233.2| methionyl-tRNA formyltransferase [Algoriphagus sp. PR1]
Length = 309
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 86/308 (27%), Positives = 157/308 (50%), Gaps = 11/308 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L++++MGT EFAV L+ LV+ +++V T P +P G RG K + S V + A + +
Sbjct: 5 LKIIYMGTPEFAVPALENLVNHGWDVIAVITAPDKPKG-RGQKMIFSPVKEAALKHDIKV 63
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L PT L ++++ L +V ++P+ + + +G +N HASLLP +RGAAPI
Sbjct: 64 LQPTNLKSPDFQEELKSLKADLQIVVAFRMLPESVWSMPPMGTFNLHASLLPNYRGAAPI 123
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ ETG+ + +DTG + + KV I + + +L + +++ +
Sbjct: 124 NWAIINGEKETGVTTFFLKHEIDTGSIIYQEKVSILEEDDLGSVYSKLMTKGSELVLKTV 183
Query: 183 DKLEQNNLPLSPQIENG-ITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + ++ + PQ E I +A KI K ++++ SA +HN +R LSP+P AW +
Sbjct: 184 ESIAKDEVTPLPQDETKAIHHAPKIFKETGKIDWNDSAVKIHNLVRGLSPYPAAWFILDD 243
Query: 242 GNKHERIKLLESQLVEGEGK--PGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ K+ +++ + PG+ + G + ++ +Q G + + I D
Sbjct: 244 ----KICKVFKTKYSTDKSPLSPGQYESDGKTYLKFQTGDGVLELIEIQLEGKKRMGIED 299
Query: 297 FLLGCPVI 304
FL G +
Sbjct: 300 FLRGYKLA 307
>gi|163751681|ref|ZP_02158900.1| methionyl-tRNA formyltransferase [Shewanella benthica KT99]
gi|161328420|gb|EDP99576.1| methionyl-tRNA formyltransferase [Shewanella benthica KT99]
Length = 319
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 115/314 (36%), Positives = 166/314 (52%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L +VF GT +FA LQAL+ S H ++ VY+QP RPAG RG K S V A E ++P
Sbjct: 3 PLNIVFAGTPDFAARHLQALIDSEHHVIGVYSQPDRPAG-RGKKLQASPVKTLALEHNIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E +Q LS D+ VVVAYGL++PQ +L+ +LG N H S+LPRWRGAA
Sbjct: 62 IYQPKSLRDEAAQQELSGLNADLMVVVAYGLILPQVVLDTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETGI IM+MD LDTG + ++ I + + L +L++ A+++
Sbjct: 122 PIQRALWAGDKETGITIMQMDLGLDTGDMLLKTQLTIEDDDTSGSLYDKLALQGPDALIQ 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L L Q E YA+K+SK E +++ +SA + IRA +P+P +
Sbjct: 182 ALAGLANGELKAEKQDETLANYAKKLSKEEAELDWNKSALQLWREIRAFNPWPISHFSHN 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R + + G +I IA +G + + +Q G + L +GD
Sbjct: 242 DASIKVRQ--AKVSESISDAPAGTIISADKNGIEIATGEGVLSLQNMQLPGKKPLSVGDI 299
Query: 298 LL--GCPVIIGCIV 309
L G G +
Sbjct: 300 LNSRGDWFTPGTRL 313
>gi|144898455|emb|CAM75319.1| Methionyl-tRNA formyltransferase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 302
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 136/308 (44%), Positives = 196/308 (63%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ FMGT +F+VA L AL+ + H +V VY QPPRPAG RG K L+ VH A + +
Sbjct: 1 MRLAFMGTPDFSVAILSALLDAGHDVVCVYAQPPRPAG-RGHKEQLTPVHAFAAQHGIEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+P + E + F + + D AVV AYGL++PQ IL+A + G N HASLLPRWRGAAP
Sbjct: 60 RIPKSLKSEAEQQAFRALDLDAAVVAAYGLILPQAILDAPRRGCLNVHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+AGD ETG+ IM+MD LDTG + + +PI+++ N A L L+VL A +V+A
Sbjct: 120 IQRAILAGDAETGVTIMQMDAGLDTGAMLLVESLPITADTNAASLHDALAVLGARLIVDA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + LP Q E+G+TYA K++K E R+++ R A + +R L+P+PG W ++
Sbjct: 180 L--ARHDALPRVKQPEDGVTYAHKLAKDEGRLDWNRPAVELERQVRGLTPWPGVWCQVGE 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+K+L + L EG G PG V++ + +AC GA+R++R QRAG ++ D L G
Sbjct: 238 ----ERLKVLAAGLAEGAGAPGTVLDDSLLVACGSGALRLLRXQRAGKGPMEAADLLRGF 293
Query: 302 PVIIGCIV 309
+ G I+
Sbjct: 294 AIPRGSIL 301
>gi|310828896|ref|YP_003961253.1| hypothetical protein ELI_3328 [Eubacterium limosum KIST612]
gi|308740630|gb|ADO38290.1| hypothetical protein ELI_3328 [Eubacterium limosum KIST612]
Length = 313
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 99/315 (31%), Positives = 160/315 (50%), Gaps = 12/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+V MGT++FAV L LV + H + +V QP RP +RG K V ++A E +P
Sbjct: 3 KLRIVLMGTTDFAVPALNKLVEAGHDVAAVVAQPDRP-NQRGKKIKFLPVKQRALELGIP 61
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P ++ E + + ADV VV AYG ++ + IL LG N H SLLP++RGAA
Sbjct: 62 VLQPERIKVPEVVEELRALKADVFVVAAYGQILSEEILFMPPLGSVNIHGSLLPKYRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ AI+ G+ E+G+ IMKMD +DTG + VPI + L L+ A +++
Sbjct: 122 PVHHAIIDGETESGVTIMKMDIGMDTGDMLSKVSVPIDAKTTVGYLHDLLAEKGAELLLD 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L + Q EN TYA+K+ K ++++ +++ + I PFPGA+ E+
Sbjct: 182 TLESLSNGSAIPEKQDENMATYADKVEKTTGKLDWNQTSFKILRRINGTDPFPGAYTEL- 240
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
E+IK + ++ G+ PG V+ + GA+ + +Q G + +
Sbjct: 241 ---NGEKIKCFAPESLDYSGEELPGTVLQADTKHGLVVKTGDGALAVGEIQMPGKKRMLS 297
Query: 295 GDFLLGCPVIIGCIV 309
+ G + +G
Sbjct: 298 KVYFNGNSIALGSRF 312
>gi|229111337|ref|ZP_04240890.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock1-15]
gi|228672113|gb|EEL27404.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock1-15]
Length = 308
Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 157/308 (50%), Gaps = 8/308 (2%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP-T 66
MGT +F+V L+ L+ + +V V TQP RP G R + V +A++ +P L P
Sbjct: 1 MGTPDFSVPVLRRLIEDGYEVVGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPVLQPLK 59
Query: 67 KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG API AI
Sbjct: 60 IREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAPIHYAI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
M G +TGI IM M + LD G + +V I T L +LS AH + + + L
Sbjct: 120 MEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTVPLLI 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ + +
Sbjct: 180 QGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA--GQVV 237
Query: 247 RIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFLLGCP 302
++ E + + G ++ F +A S V+I LQ +G + + FL G
Sbjct: 238 KVWWGEKVPITEPAEAGTIVAIEEDGFVVATSNETGVKITELQPSGKKRMSCSQFLRGTK 297
Query: 303 VIIGCIVG 310
IG +G
Sbjct: 298 PEIGTKLG 305
>gi|228902370|ref|ZP_04066526.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis IBL 4222]
gi|228966816|ref|ZP_04127860.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|229180142|ref|ZP_04307486.1| Methionyl-tRNA formyltransferase [Bacillus cereus 172560W]
gi|228603351|gb|EEK60828.1| Methionyl-tRNA formyltransferase [Bacillus cereus 172560W]
gi|228792915|gb|EEM40473.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228857268|gb|EEN01772.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis IBL 4222]
Length = 308
Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 157/308 (50%), Gaps = 8/308 (2%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP-T 66
MGT +F+V L+ L+ + +V V TQP RP G R + V +A++ +P L P
Sbjct: 1 MGTPDFSVPVLRRLIEDGYEVVGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPVLQPLK 59
Query: 67 KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG API AI
Sbjct: 60 IREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAPIHYAI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
M G +TGI IM M + LD G + +V I T L +LS AH + + + L
Sbjct: 120 MEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTVPLLI 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ + +
Sbjct: 180 QGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA--GQVV 237
Query: 247 RIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFLLGCP 302
++ E V + G ++ F +A S V+I LQ +G + + FL G
Sbjct: 238 KVWWGEKVPVTEPAEAGTIVAIEEDGFVVATSNETGVKITELQPSGKKRMSCSQFLRGTK 297
Query: 303 VIIGCIVG 310
IG +G
Sbjct: 298 PEIGTKLG 305
>gi|85858798|ref|YP_461000.1| methionyl-tRNA formyltransferase [Syntrophus aciditrophicus SB]
gi|123766242|sp|Q2LRX4|FMT_SYNAS RecName: Full=Methionyl-tRNA formyltransferase
gi|85721889|gb|ABC76832.1| methionyl-tRNA formyltransferase [Syntrophus aciditrophicus SB]
Length = 312
Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats.
Identities = 102/315 (32%), Positives = 164/315 (52%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ ++FMGT EFA+ +L+ LV + + I +V TQP RP G RG + V V A + +P
Sbjct: 3 KISILFMGTPEFALPSLEILVRNGYPIAAVVTQPDRPKG-RGKQLVAPPVKIAATSYQIP 61
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + + E + D+ VV A+G ++P+ +L+ LG N H SLLPR+RGAA
Sbjct: 62 VLQPPGIKDPAFLEILEKISPDLIVVAAFGQILPKTVLDFPPLGCINVHPSLLPRYRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI ++ G+ TG+ IM MD+ LDTG + + PI N L LS L A ++
Sbjct: 122 PINWTLIHGETRTGVTIMYMDEGLDTGDILLQEETPIPPEENFGILHDRLSNLGADLLLR 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ LE + P +PQ ++ +YA + K + + + + N IR LSP PGA+ +
Sbjct: 182 AVRLLEAHQAPRNPQEDSLSSYAPMLKKEDGLIRWSEEVSTIANRIRGLSPAPGAYTFL- 240
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ + +E G+PGEV + + G V + +Q + +++
Sbjct: 241 ---NGKTLKIFAAAGIEQSVPGQPGEVGKLTDQGLQVTAGNGYVVLQDVQMENRKRMNVS 297
Query: 296 DFLLGCPVIIGCIVG 310
DFL G + G ++G
Sbjct: 298 DFLRGHKLSTGTVLG 312
>gi|239993909|ref|ZP_04714433.1| methionyl-tRNA formyltransferase [Alteromonas macleodii ATCC 27126]
Length = 316
Score = 176 bits (446), Expect = 4e-42, Method: Composition-based stats.
Identities = 121/304 (39%), Positives = 181/304 (59%), Gaps = 13/304 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+V+F GT +FA L AL+ S H +++VYTQP RPAG RG K S V A+E ++P
Sbjct: 4 PLKVIFAGTPDFAAKHLSALLESEHEVIAVYTQPDRPAG-RGKKLTASPVKVLAEENAIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L ++ ++ L+ D+ VVVAYGL++P +LNA KLG N H S+LP+WRGAA
Sbjct: 63 VYQPQSLKAQDAQEELASLNADLMVVVAYGLILPTAVLNAPKLGCINVHGSILPKWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD+ LDTG + + +PI+S +A L ++L+ L A+VE
Sbjct: 123 PIQRSIWAGDAETGVTIMQMDEGLDTGDMLHIATLPITSEDTSATLYEKLAELGPQALVE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ E + + Q ++ TYA+K+SK E +N+ AE + +IRA +P+P AW+++
Sbjct: 183 VVN--EFDRYTPTKQDDSQATYAKKLSKEEALINWADDAEQIERNIRAFNPWPVAWMQVE 240
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
N +K+ + +V PG V+ TIA + A+ I LQ G + L
Sbjct: 241 DQN----VKVWSASVVPLNKGATPGTVVSANKEGITIATGRDALCITTLQIPGKKALPAS 296
Query: 296 DFLL 299
D +
Sbjct: 297 DVIN 300
>gi|18310725|ref|NP_562659.1| methionyl-tRNA formyltransferase [Clostridium perfringens str. 13]
gi|21542041|sp|Q8XJL3|FMT_CLOPE RecName: Full=Methionyl-tRNA formyltransferase
gi|18145406|dbj|BAB81449.1| methionyl-tRNA formyltransferase [Clostridium perfringens str. 13]
Length = 309
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 93/312 (29%), Positives = 162/312 (51%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV +L++L+ + + +V+TQP RP G RG K +S V + A E ++P
Sbjct: 1 MKIVFMGTPDFAVPSLKSLI-NEFGVEAVFTQPDRPKG-RGKKLGMSPVKEVALEHNIPV 58
Query: 63 LVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E E+ + D +VVA+G ++P+ +L+ K G N HASLLP++RGAA
Sbjct: 59 YQPLRLKNEPETIEELKNMEPDFIIVVAFGQILPKEVLDIPKYGCINLHASLLPKFRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ +I+ G+ TG M MD LDTG + +V I+ N+ L L +V
Sbjct: 119 PLNWSIIKGEKVTGNTTMLMDVGLDTGDMLLKDEVEITDNMTAGELHDILMERGGELLVR 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + N + Q E YA ++K ++++ SA+++HN +R L+P+P A
Sbjct: 179 TIKGILNNEITPEKQNEEETCYAPMLNKEIAKIDWSLSAQDIHNLVRGLNPWPVALTSY- 237
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ ++ + + +PG +I ++ + + I +LQ + L + F
Sbjct: 238 -DDITMKVHQTRVEKGDSNKEPGTIISVDKTGIKVSTGKDILVIEKLQFPNSKQLFVEQF 296
Query: 298 LLGCPVIIGCIV 309
+ G V IG ++
Sbjct: 297 INGNSVEIGKVL 308
>gi|153953995|ref|YP_001394760.1| methionyl-tRNA formyltransferase [Clostridium kluyveri DSM 555]
gi|219854609|ref|YP_002471731.1| hypothetical protein CKR_1266 [Clostridium kluyveri NBRC 12016]
gi|146346876|gb|EDK33412.1| Hypothetical protein CKL_1370 [Clostridium kluyveri DSM 555]
gi|219568333|dbj|BAH06317.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 310
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 92/314 (29%), Positives = 163/314 (51%), Gaps = 13/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT +F+V +L+ LV + +V TQP +P G RG K S V ++A ++++P
Sbjct: 1 MDIVFMGTPDFSVPSLRRLVE-EFQVRAVVTQPDKPKG-RGRKMTFSPVKEEALKYNIPV 58
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
PTKL + + VV+AYG ++ + IL+ K+G N HASLLP++RGAA
Sbjct: 59 YQPTKLKDDREVIDALKKIKPEFIVVIAYGQLLTKEILDIPKIGCINLHASLLPKYRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI I+ G+ +G M MD LDTG V I N+ L L A +V+
Sbjct: 119 PINWCIIEGEERSGNTTMFMDTGLDTGDVLLSSTFEIEENMTAGQLHDILMENGAELLVD 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L++ + Q E+ YA+ +SK ++N+ S++ + +R L+P+P A+
Sbjct: 179 TLKGLKEGTVKRKKQGESPTAYAKMLSKDMAKINWNLSSKKIKCFVRGLNPWPIAYTPYK 238
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
N K+ E +++ + + G ++ +AC +G + I ++Q GG+ +++
Sbjct: 239 QKNM----KVYEVAVLDEISKKEAGYILDVGKEGIKVACGEGVILIKKIQFPGGKPMEVK 294
Query: 296 DFLLGCPVIIGCIV 309
+++ G + ++
Sbjct: 295 EYIKGHSIEKDIVL 308
>gi|229146437|ref|ZP_04274808.1| Methionyl-tRNA formyltransferase [Bacillus cereus BDRD-ST24]
gi|228637070|gb|EEK93529.1| Methionyl-tRNA formyltransferase [Bacillus cereus BDRD-ST24]
Length = 308
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 158/308 (51%), Gaps = 8/308 (2%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP-T 66
MGT +F+V L+ L+ + +V V TQP RP G R + V +A++ +P L P
Sbjct: 1 MGTPDFSVPVLRRLIEDGYEVVGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPVLQPLK 59
Query: 67 KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
++EYE+ L+ +D+ V A+G ++P IL A K G N HASLLP RG API AI
Sbjct: 60 IREKDEYEKVLALESDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAPIHYAI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
M G +TGI IM M + LD G + +V I T L +LS AH + + + L
Sbjct: 120 MEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKTVPLLI 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ + +
Sbjct: 180 QGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA--GQVV 237
Query: 247 RIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFLLGCP 302
++ E + + G ++ F +A S V+I LQ +G + + FL G
Sbjct: 238 KVWWGEKVPITEPAEAGTIVAIEEDGFVVATSNETGVKITELQPSGKKRMSCSQFLRGTK 297
Query: 303 VIIGCIVG 310
IG +G
Sbjct: 298 PEIGTKLG 305
>gi|110800829|ref|YP_696429.1| methionyl-tRNA formyltransferase [Clostridium perfringens ATCC
13124]
gi|110675476|gb|ABG84463.1| methionyl-tRNA formyltransferase [Clostridium perfringens ATCC
13124]
Length = 309
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 94/312 (30%), Positives = 162/312 (51%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV +L++L+ + + +V+TQP RP G RG K +S V + A E ++P
Sbjct: 1 MKIVFMGTPDFAVPSLKSLI-NEFGVEAVFTQPDRPKG-RGKKLGMSPVKEVALEHNIPV 58
Query: 63 LVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E E+ S D +VVA+G ++P+ +L+ K G N HASLLP++RGAA
Sbjct: 59 YQPLRLKNEPETIEELKSMEPDFIIVVAFGQILPKEVLDIPKYGCINLHASLLPKFRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ +I+ G+ TG M MD LDTG + +V I+ N+ L L +V
Sbjct: 119 PLNWSIIKGEKVTGNTTMLMDVGLDTGDMLLKDEVEITDNMTAGELHDILMERGGELLVR 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + N + Q E YA ++K ++++ SA+++HN +R L+P+P A
Sbjct: 179 TIKGILNNEITPEKQNEEETCYASMLNKEIAKIDWSLSAQDIHNLVRGLNPWPVALTSY- 237
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ ++ + + +PG +I ++ + + I +LQ + L + F
Sbjct: 238 -DDITMKVHQTRVEKGDSNKEPGTIIAVDKTGIKVSTGKDILVIEKLQFPNSKQLFVEQF 296
Query: 298 LLGCPVIIGCIV 309
+ G V IG ++
Sbjct: 297 INGNSVEIGKVL 308
>gi|168210624|ref|ZP_02636249.1| methionyl-tRNA formyltransferase [Clostridium perfringens B str.
ATCC 3626]
gi|170711312|gb|EDT23494.1| methionyl-tRNA formyltransferase [Clostridium perfringens B str.
ATCC 3626]
Length = 309
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 94/312 (30%), Positives = 162/312 (51%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV +L++L+ + + +V+TQP RP G RG K +S V + A E ++P
Sbjct: 1 MKIVFMGTPDFAVPSLKSLI-NEFGVEAVFTQPDRPKG-RGKKLGMSPVKEVALEHNIPV 58
Query: 63 LVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E E+ + D +VVA+G ++P+ +L+ K G N HASLLP++RGAA
Sbjct: 59 YQPLRLKNEPETIEELKNMEPDFIIVVAFGQILPKEVLDIPKYGCINLHASLLPKFRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ +I+ G+ TG M MD LDTG + +V I+ N+ L L +V
Sbjct: 119 PLNWSIIKGEKVTGNTTMLMDVGLDTGDMLLKDEVEITDNMTAGELHDILMERGGELLVR 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + N + Q E YA ++K ++++ SA+++HN +R L+P+P A
Sbjct: 179 TIKGILNNEITPEKQNEEETCYASMLNKEIAKIDWSLSAQDIHNLVRGLNPWPVALTSY- 237
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ ++ + E +PG +I ++ + + I +LQ + L + F
Sbjct: 238 -DDIIMKVHQTRVEKGESNKEPGTIISVDKTGIKVSTGKDILVIEKLQFPNSKQLFVEQF 296
Query: 298 LLGCPVIIGCIV 309
+ G V IG ++
Sbjct: 297 INGNSVEIGKVL 308
>gi|168214220|ref|ZP_02639845.1| methionyl-tRNA formyltransferase [Clostridium perfringens CPE str.
F4969]
gi|168217030|ref|ZP_02642655.1| methionyl-tRNA formyltransferase [Clostridium perfringens NCTC
8239]
gi|170714297|gb|EDT26479.1| methionyl-tRNA formyltransferase [Clostridium perfringens CPE str.
F4969]
gi|182380966|gb|EDT78445.1| methionyl-tRNA formyltransferase [Clostridium perfringens NCTC
8239]
Length = 309
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 94/312 (30%), Positives = 162/312 (51%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV +L++L+ + + +V+TQP RP G RG K +S V + A E ++P
Sbjct: 1 MKIVFMGTPDFAVPSLKSLI-NEFGVEAVFTQPDRPKG-RGKKLGMSPVKEVALEHNIPV 58
Query: 63 LVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E E+ + D +VVA+G ++P+ +L+ K G N HASLLP++RGAA
Sbjct: 59 YQPLRLKNEPETIEELKNMEPDFIIVVAFGQILPKEVLDIPKYGCINLHASLLPKFRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ +I+ G+ TG M MD LDTG + +V I+ N+ L L +V
Sbjct: 119 PLNWSIIKGEKVTGNTTMLMDVGLDTGDMLLKDEVEITDNMTAGELHDILMERGGELLVR 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + N + Q E YA ++K ++++ SA+++HN +R L+P+P A
Sbjct: 179 TIKGILNNEITPEKQNEEETCYASMLNKEIAKIDWSLSAQDIHNLVRGLNPWPVALTSY- 237
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ ++ + E +PG +I ++ + + I +LQ + L + F
Sbjct: 238 -DDITMKVHQTRVEKGESNKEPGTIIAVDKTGIKVSTGKDILVIEKLQFPNSKQLFVEQF 296
Query: 298 LLGCPVIIGCIV 309
+ G V IG ++
Sbjct: 297 INGNSVEIGKVL 308
>gi|225871065|ref|YP_002747012.1| methionyl-tRNA formyltransferase [Streptococcus equi subsp. equi
4047]
gi|254789371|sp|C0M780|FMT_STRE4 RecName: Full=Methionyl-tRNA formyltransferase
gi|225700469|emb|CAW94890.1| methionyl-tRNA formyltransferase [Streptococcus equi subsp. equi
4047]
Length = 311
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 157/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT R++FMGT +F+ LQ L+ + I++V TQP R G R ++ V K A
Sbjct: 1 MT-RLIFMGTPQFSATVLQGLLEKPAYDILAVVTQPDRAVG-RKKDITMTPVKKLALAHQ 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + +V A +L + N HASLLP++RG
Sbjct: 59 LPVFQPEKLSGSQELADIMALGADGIVTAAFGQFLPTVLLDSVTFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ GD E G+ IM+M K +D G + +PI N + +L++L ++
Sbjct: 119 APIHYAIINGDKEAGVTIMEMVKEMDAGDMISSASLPILDTDNVGTMFDKLAILGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + +L PQ + T++ +S E R+++ + A V NHIR ++P+P A +
Sbjct: 179 KTLPDYLSGDLKPVPQDHSQATFSPNLSAEEERLDWSKPAREVFNHIRGMNPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E++L EG G G++I +A +GA+ + +Q AG + I D
Sbjct: 239 ----DGQRFKIYEAELAEGSGSAGQIIAKTKKALVVAAGEGALSLTLVQPAGKPKMPIVD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G ++G
Sbjct: 295 FLNGIGRSLEVGDVLG 310
>gi|168491382|ref|ZP_02715525.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
CDC0288-04]
gi|183574132|gb|EDT94660.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
CDC0288-04]
Length = 311
Score = 176 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 91/316 (28%), Positives = 156/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL + L +V A L + N HASLLPR RG
Sbjct: 59 LSIYQPEKLSGSPEMEDLMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ Q + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 179 DTLPAYIAGDIKPELQDTSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHTFL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 KGD----RFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIAS 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRTLTVGERFG 310
>gi|262172811|ref|ZP_06040489.1| methionyl-tRNA formyltransferase [Vibrio mimicus MB-451]
gi|261893887|gb|EEY39873.1| methionyl-tRNA formyltransferase [Vibrio mimicus MB-451]
Length = 315
Score = 176 bits (445), Expect = 5e-42, Method: Composition-based stats.
Identities = 117/314 (37%), Positives = 171/314 (54%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF G +FA L AL+SS H I++VYT+P RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGNPDFAARHLAALLSSEHEIIAVYTKPDRPAG-RGQKLTASPVKTLALEHNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P EE +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSEESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ IM+MD LDTG + + +PI S +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIESIDTSASMYDKLAELGPQALLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q Q + YA K+SK E R+N+ A ++ IRA +P+P + E
Sbjct: 183 CLQDIAQGTAVAVKQDDALANYAHKLSKEEARINWNDEAVHIERCIRAFNPWPMSHFEAA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E++ V PG +I +A Q + + LQ G + L + D
Sbjct: 243 ENSIKVWQARVETRAV--SQTPGTIIQADKSGIYVATGQDVLVLESLQIPGKKALPVQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNARADWFSVGSQL 314
>gi|163790823|ref|ZP_02185248.1| methionyl-tRNA formyltransferase [Carnobacterium sp. AT7]
gi|159873891|gb|EDP67970.1| methionyl-tRNA formyltransferase [Carnobacterium sp. AT7]
Length = 317
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 94/317 (29%), Positives = 164/317 (51%), Gaps = 14/317 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT F+V L+AL+ S + +++V +QP RP G R S V A + LP
Sbjct: 2 IKIIFMGTPAFSVPILEALIDSEYEVIAVVSQPDRPVG-RKKVLTASPVKAAAVKHGLPI 60
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ ++ D+ V A+G +PQ++L+ K G N HASLLP++RG AP
Sbjct: 61 FQPEKISGSPEMDALIALEPDLIVTAAFGQFLPQKLLSVPKYGAINVHASLLPKYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A+M G+ ETG++IM M+K +D G + + + I+ + + L LS+L +++
Sbjct: 121 VHYALMQGEKETGVSIMYMEKKMDAGDILSQKSLEITRDDDVGTLFDRLSLLGKELLMDT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ KL ++ Q E +T++ I + E +++ ++A V +R + P+P A+ E+
Sbjct: 181 LPKLLAGDITPVKQDEAKVTFSPNIKREEEMIDWNKTATEVDFQVRGMRPWPVAYTELEG 240
Query: 242 GNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIG 295
R+KL + E PG +I +AC ++I +Q AG + +
Sbjct: 241 N----RLKLWDVTPTEEVTTAAPGTIIRIEKEAIYLACGNQTVLKINEVQPAGKSKMTVM 296
Query: 296 DFLL--GCPVIIGCIVG 310
FL G + +G +VG
Sbjct: 297 AFLSGVGNQLKVGEMVG 313
>gi|165932854|ref|YP_001649643.1| methionyl-tRNA formyltransferase [Rickettsia rickettsii str. Iowa]
gi|189044565|sp|B0BWL1|FMT_RICRO RecName: Full=Methionyl-tRNA formyltransferase
gi|165907941|gb|ABY72237.1| methionyl-tRNA formyltransferase [Rickettsia rickettsii str. Iowa]
Length = 303
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 104/310 (33%), Positives = 168/310 (54%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMGT EFAV L+ L+ + H + +V+TQ P+ G RGL S +H+ A E +P
Sbjct: 1 MKVIFMGTPEFAVPALKKLI-THHEVKAVFTQQPKAKG-RGLNLAKSPIHQLAFEHQIPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P+ E NAD+ VV+AYG ++P+ IL A K G N H S LPR RGAAP
Sbjct: 59 YTPSTLRNDEIINLINKVNADIIVVIAYGFIVPKAILEAKKYGCLNIHPSDLPRHRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QR I+ GD ++ + IM+MD LDTG + + I L + + L A +++
Sbjct: 119 LQRTIIEGDRKSSVCIMRMDTGLDTGDILMKEDFDLEERITLEELHNKCANLGAELLIKT 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ Q +G+TYA K++K E ++N+ SA + IR ++P+PG +
Sbjct: 179 LANIDNIVPIT--QPSDGVTYAHKLTKAEGKINWHESAYKIDCKIRGMNPWPGVYFSY-- 234
Query: 242 GNKHERIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ IK+LE++ + + G VI+ IAC G +R+ +LQ+ + L I +FL
Sbjct: 235 --NDKIIKILEAEYLNADHHFTSGTVISDKLEIACGSGILRVKKLQQESKKALSIEEFLR 292
Query: 300 GCPVIIGCIV 309
G ++ ++
Sbjct: 293 GTNILKDTVL 302
>gi|217977313|ref|YP_002361460.1| methionyl-tRNA formyltransferase [Methylocella silvestris BL2]
gi|217502689|gb|ACK50098.1| methionyl-tRNA formyltransferase [Methylocella silvestris BL2]
Length = 312
Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats.
Identities = 134/303 (44%), Positives = 186/303 (61%), Gaps = 1/303 (0%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +FAV L ++ H + +VY++ P+P GRRGL+ LS VH A F L P
Sbjct: 1 MGTPDFAVPVLTEIIGQGHDVAAVYSRAPKPGGRRGLEPTLSPVHAAAMRFGLKVETPAS 60
Query: 68 LGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
L +E SF A+ A+VVAYGL++P+ L+ G N HASLLPRWRGAAPIQRAI
Sbjct: 61 LKSDEAIATLASFEAEAAIVVAYGLILPKAALDLFPRGCLNLHASLLPRWRGAAPIQRAI 120
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
MAGD ETG+ +M M++ LDTGPVA ++ I N + L+++ A M A+ L
Sbjct: 121 MAGDAETGVMVMGMEEGLDTGPVALAERIEIGPEANAGEVHDRLALIGADLMARALAALA 180
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ +L +PQ +G+TYA KI K E R+++ A VH+ IRAL+PFPGA+ E +G E
Sbjct: 181 RGSLRFTPQPADGVTYAAKIEKSEARIDWSEPARRVHDKIRALAPFPGAFFEADLGKGPE 240
Query: 247 RIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIG 306
RIK+L ++L G G PG +++ TIAC +GA+ I+ QRAG + +FL G + G
Sbjct: 241 RIKILRAKLAPGAGAPGTLLDDRLTIACGEGAIAILDAQRAGRTPMSAAEFLRGASLAAG 300
Query: 307 CIV 309
I+
Sbjct: 301 VIL 303
>gi|325288077|ref|YP_004263867.1| Methionyl-tRNA formyltransferase [Cellulophaga lytica DSM 7489]
gi|324323531|gb|ADY30996.1| Methionyl-tRNA formyltransferase [Cellulophaga lytica DSM 7489]
Length = 315
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 98/311 (31%), Positives = 163/311 (52%), Gaps = 7/311 (2%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M+ LR+VFMGT +FAV L +L+ +++V V T P +PAG RG K SAV + A++ +
Sbjct: 1 MSNLRIVFMGTPDFAVTILNSLIQHKYNVVGVITAPDKPAG-RGRKIHTSAVKQYAEKNN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L L PT L + + L +V ++P+ + K G +N HASLLP++RGA
Sbjct: 60 LTILQPTNLKAPAFIEELKALEANLQIVVAFRMLPKVVWQMPKYGTFNLHASLLPQYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G+ ETG+ +D +DTG +K IS+ N L +L L A ++
Sbjct: 120 APINWAIINGETETGVTTFFIDDKIDTGETILHKKTNISATENAGALHDKLMHLGAELVI 179
Query: 180 EAMDKLEQNNLPLSPQ-IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
E ++ +E+ + Q + + A KI K ++++ A +N IR LSP+P AW
Sbjct: 180 ETVELIEKEEVTTKKQEENSNLKLAYKIHKDTCKIDWTADATKTYNLIRGLSPYPAAWTT 239
Query: 239 MMIGNKHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ + +K+ ++L+E PG+++ +A G ++++ +Q +G R +
Sbjct: 240 LYNNHSKIDLKIYTTELIEETHNLNPGKLVFDKKTIKVAVPNGYIKLLEIQLSGKRRMKT 299
Query: 295 GDFLLGCPVII 305
D L G +
Sbjct: 300 SDVLNGLQLKE 310
>gi|217968556|ref|YP_002353790.1| methionyl-tRNA formyltransferase [Thauera sp. MZ1T]
gi|217505883|gb|ACK52894.1| methionyl-tRNA formyltransferase [Thauera sp. MZ1T]
Length = 320
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 130/311 (41%), Positives = 181/311 (58%), Gaps = 9/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LRV F GT EFA L A++ +++++ V TQP RPAG RG+K SAV + A +
Sbjct: 11 LRVAFAGTPEFAAQALDAILKAAYAVPLVLTQPDRPAG-RGMKLSPSAVKQLALAHGIEV 69
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K +E+ + ++ DV VV AYGL++P +L +LG N HASLLPRWRGAAP
Sbjct: 70 DQPEKLRTEEQRARLVACAPDVLVVAAYGLILPPAVLALPRLGCINIHASLLPRWRGAAP 129
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAI AGD ETGI IM+MD+ LDTGP+ R +PI+++ TA L L+ L +VEA
Sbjct: 130 IHRAIEAGDAETGITIMQMDEGLDTGPMLLRRALPIAADDTTASLHDRLAALGGACIVEA 189
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L L +PQ G+TYA KI + E +++ R A + +RA PFPGA +
Sbjct: 190 LAALAAGALVATPQPAEGVTYAAKIGRAEADIDWSRPAAEIERAMRAFDPFPGAVSSLRD 249
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+K ++++V GEG+PG V+ +AC + A+R LQR G + L G+FL
Sbjct: 250 TA----VKCWKARVVAGEGEPGRVLAVDADGIVVACGRDALRCTVLQRPGSKRLPAGEFL 305
Query: 299 LGCPVIIGCIV 309
G PV +G
Sbjct: 306 RGFPVSVGERF 316
>gi|56807938|ref|ZP_00365758.1| COG0223: Methionyl-tRNA formyltransferase [Streptococcus pyogenes
M49 591]
Length = 305
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 11/309 (3%)
Query: 8 MGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MGT +F+ L+ L+ + + I+ V TQP R G R ++ V + A E + P
Sbjct: 1 MGTPQFSATVLKGLLDNPAYEILGVVTQPDRAVG-RKKDIKVTPVKQLALEHGISIYQPE 59
Query: 67 KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
KL + + ++ A IL + N HASLLP++RG API AI
Sbjct: 60 KLSGSQELIEIMGLGADGIITAAFGQFLPTILLDSVSFAINVHASLLPKYRGGAPIHYAI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
M GD E G+ IM+M K +D G + PI N L ++L+++ +++++
Sbjct: 120 MNGDKEAGVTIMEMIKEMDAGDMVAKASTPILETDNVGTLFEKLAIIGRDLLLDSLPAYL 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
L PQ + T++ IS ++++ S + V NHIR ++P+P A + +
Sbjct: 180 SGELKPIPQDHSQATFSPNISPEHEKLDWTMSNQEVFNHIRGMNPWPVAHTFLEG----Q 235
Query: 247 RIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL--GC 301
R+K+ E+QL EGEG PG+VI + IA QGA+ ++ +Q AG + I DFL G
Sbjct: 236 RLKIYEAQLAEGEGLPGQVIVKTKKSLVIATGQGALSLIVVQPAGKPKMSIIDFLNGIGR 295
Query: 302 PVIIGCIVG 310
+ +G I+G
Sbjct: 296 KLEVGDIIG 304
>gi|15640077|ref|NP_229704.1| methionyl-tRNA formyltransferase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121587248|ref|ZP_01677021.1| methionyl-tRNA formyltransferase [Vibrio cholerae 2740-80]
gi|121727877|ref|ZP_01680936.1| methionyl-tRNA formyltransferase [Vibrio cholerae V52]
gi|147673280|ref|YP_001218367.1| methionyl-tRNA formyltransferase [Vibrio cholerae O395]
gi|153817572|ref|ZP_01970239.1| methionyl-tRNA formyltransferase [Vibrio cholerae NCTC 8457]
gi|153821938|ref|ZP_01974605.1| methionyl-tRNA formyltransferase [Vibrio cholerae B33]
gi|229508330|ref|ZP_04397834.1| methionyl-tRNA formyltransferase [Vibrio cholerae BX 330286]
gi|229508831|ref|ZP_04398322.1| methionyl-tRNA formyltransferase [Vibrio cholerae B33]
gi|229517102|ref|ZP_04406548.1| methionyl-tRNA formyltransferase [Vibrio cholerae RC9]
gi|229606605|ref|YP_002877253.1| methionyl-tRNA formyltransferase [Vibrio cholerae MJ-1236]
gi|254851610|ref|ZP_05240960.1| methionyl-tRNA formyltransferase [Vibrio cholerae MO10]
gi|255746773|ref|ZP_05420719.1| methionyl-tRNA formyltransferase [Vibrio cholera CIRS 101]
gi|262155854|ref|ZP_06028976.1| methionyl-tRNA formyltransferase [Vibrio cholerae INDRE 91/1]
gi|262166897|ref|ZP_06034618.1| methionyl-tRNA formyltransferase [Vibrio cholerae RC27]
gi|14548058|sp|Q9KVU4|FMT_VIBCH RecName: Full=Methionyl-tRNA formyltransferase
gi|172047502|sp|A5F4B4|FMT_VIBC3 RecName: Full=Methionyl-tRNA formyltransferase
gi|9654438|gb|AAF93223.1| methionyl-tRNA formyltransferase [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548494|gb|EAX58550.1| methionyl-tRNA formyltransferase [Vibrio cholerae 2740-80]
gi|121629821|gb|EAX62236.1| methionyl-tRNA formyltransferase [Vibrio cholerae V52]
gi|126511840|gb|EAZ74434.1| methionyl-tRNA formyltransferase [Vibrio cholerae NCTC 8457]
gi|126520558|gb|EAZ77781.1| methionyl-tRNA formyltransferase [Vibrio cholerae B33]
gi|146315163|gb|ABQ19702.1| methionyl-tRNA formyltransferase [Vibrio cholerae O395]
gi|227011952|gb|ACP08162.1| methionyl-tRNA formyltransferase [Vibrio cholerae O395]
gi|229346165|gb|EEO11137.1| methionyl-tRNA formyltransferase [Vibrio cholerae RC9]
gi|229354106|gb|EEO19038.1| methionyl-tRNA formyltransferase [Vibrio cholerae B33]
gi|229354603|gb|EEO19525.1| methionyl-tRNA formyltransferase [Vibrio cholerae BX 330286]
gi|229369260|gb|ACQ59683.1| methionyl-tRNA formyltransferase [Vibrio cholerae MJ-1236]
gi|254847315|gb|EET25729.1| methionyl-tRNA formyltransferase [Vibrio cholerae MO10]
gi|255735530|gb|EET90929.1| methionyl-tRNA formyltransferase [Vibrio cholera CIRS 101]
gi|262024668|gb|EEY43348.1| methionyl-tRNA formyltransferase [Vibrio cholerae RC27]
gi|262030306|gb|EEY48948.1| methionyl-tRNA formyltransferase [Vibrio cholerae INDRE 91/1]
Length = 315
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 117/314 (37%), Positives = 175/314 (55%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPERPAG-RGKKLTASPVKTLALEHNVP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ IM+MD LDTG + + +PI ++ +A + +L+ L A++E
Sbjct: 123 PIQRSIWAGDSETGVTIMQMDVGLDTGDMLKIATLPIEASDTSASMYDKLAELGPQALLE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q Q + YA K+SK E R+N+ +A ++ IRA +P+P + E+
Sbjct: 183 CLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPMSHFEVA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E++ V PG +I +A Q + + LQ G + L + D
Sbjct: 243 ENSIKVWQARVETRAV--TQTPGTIIQADKSGIYVATGQDVLVLESLQIPGKKALPVQDI 300
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 301 LNARADWFSVGSQL 314
>gi|169342702|ref|ZP_02863743.1| methionyl-tRNA formyltransferase [Clostridium perfringens C str.
JGS1495]
gi|169299208|gb|EDS81278.1| methionyl-tRNA formyltransferase [Clostridium perfringens C str.
JGS1495]
Length = 309
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 93/312 (29%), Positives = 162/312 (51%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV +L++L+ + + +V+TQP RP G RG K +S V + A E ++P
Sbjct: 1 MKIVFMGTPDFAVPSLKSLI-NEFGVEAVFTQPDRPKG-RGKKLGMSPVKEVALEHNIPV 58
Query: 63 LVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E E+ + D +VVA+G ++P+ +L+ K G N HASLLP++RGAA
Sbjct: 59 YQPLRLKNEPETIEELKNMEPDFIIVVAFGQILPKEVLDIPKYGCINLHASLLPKFRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ +I+ G+ TG M MD LDTG + +V I+ N+ L L +V
Sbjct: 119 PLNWSIIKGEKVTGNTTMLMDVGLDTGDMLLKDEVEITDNMTAGELHDILMERGGELLVR 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + N + Q E YA ++K ++++ SA+++HN +R L+P+P A
Sbjct: 179 TIKGILNNEITPEKQNEEETCYASMLNKEIAKIDWSLSAQDIHNLVRGLNPWPVALTSY- 237
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ ++ + + +PG +I ++ + + I +LQ + L + F
Sbjct: 238 -DDLTMKVHQTRVEKGDSNKEPGTIIAVDKTGIKVSTGKDILVIEKLQFPNSKQLFVEQF 296
Query: 298 LLGCPVIIGCIV 309
+ G V IG ++
Sbjct: 297 INGNSVEIGKVL 308
>gi|15892202|ref|NP_359916.1| methionyl-tRNA formyltransferase [Rickettsia conorii str. Malish 7]
gi|229586452|ref|YP_002844953.1| methionyl-tRNA formyltransferase [Rickettsia africae ESF-5]
gi|14916985|sp|O33519|FMT_RICCN RecName: Full=Methionyl-tRNA formyltransferase
gi|259646048|sp|C3PMQ0|FMT_RICAE RecName: Full=Methionyl-tRNA formyltransferase
gi|15619335|gb|AAL02817.1| methionyl-tRNA formyltransferase [Rickettsia conorii str. Malish 7]
gi|228021502|gb|ACP53210.1| Methionyl-tRNA formyltransferase [Rickettsia africae ESF-5]
Length = 303
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 105/310 (33%), Positives = 170/310 (54%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMGT EFAV L+ L+ + H + +V+TQ P+ G RGL S +H+ A E +P
Sbjct: 1 MKVIFMGTPEFAVPALKKLI-THHEVKAVFTQQPKAKG-RGLNLAKSPIHQLAFEHQIPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P+ E NAD+ VV+AYG ++P+ IL A K G N H S LPR RGAAP
Sbjct: 59 YTPSTLRNDEIINLINKVNADIIVVIAYGFIVPKAILEAKKYGCLNIHPSDLPRHRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QR I+ GD ++ + IM+MD LDTG + + I L + + L A +++
Sbjct: 119 LQRTIIEGDRKSSVCIMRMDTGLDTGDILMKEDFDLEERITLEELHNKCANLGAELLIKT 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ Q +G+TYA K++K E ++N+ SA + IR ++P+PGA+
Sbjct: 179 LANIDNIVPIT--QPSDGVTYAHKLTKEEGKINWHESAYKIDCKIRGMNPWPGAYFSY-- 234
Query: 242 GNKHERIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ IK+LE++ + + G VI+ IAC G +R+ +LQ+ + L+I +FL
Sbjct: 235 --NDKIIKILEAEYLNADHHFTSGTVISDKLEIACGSGILRVKKLQQESKKALNIEEFLR 292
Query: 300 GCPVIIGCIV 309
G ++ ++
Sbjct: 293 GTNILKDTVL 302
>gi|56964083|ref|YP_175814.1| methionyl-tRNA formyltransferase [Bacillus clausii KSM-K16]
gi|73919377|sp|Q5WFK7|FMT_BACSK RecName: Full=Methionyl-tRNA formyltransferase
gi|56910326|dbj|BAD64853.1| methionyl-tRNA formyltransferase [Bacillus clausii KSM-K16]
Length = 312
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 101/315 (32%), Positives = 176/315 (55%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT F+V L+ L+ +H++++V TQP RP G R S V ++AQ+ +P
Sbjct: 1 MKIVFMGTPAFSVPILKRLID-THTVLAVVTQPDRPVG-RKRLLTPSPVKEEAQKHGIPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P K+ + ++E L+F ++ V AYG ++P+ +L+A G N HASLLP++RG API
Sbjct: 59 LQPEKIRE-QHEDILAFAPELIVTAAYGQIVPKAVLDAPPYGCINVHASLLPKYRGGAPI 117
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
+AI+ G+ +TGI+IM M + LD G V + V I+ + + +LS + A + + +
Sbjct: 118 HQAIIDGEKQTGISIMYMAEKLDAGAVLSQQAVAITDEDDVQTMHDKLSAVGADLLEKTI 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
LEQ + Q E+ T+A I + + +++ + A + N +R + P+P A+ +
Sbjct: 178 VALEQGTIEAVAQDEDKATFAPNIKREQEVLDWQKPARALFNQVRGMRPWPVAYTLVNGN 237
Query: 243 NKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAV-RIMRLQRAGGRVLDIGD 296
R+K+ E++ + GE +PGE++ +AC G + R+ +Q AG + +
Sbjct: 238 ----RLKVWEAKEIAGEHECEPGEILATTKQGIDVACGNGTILRLTVVQPAGKKAVLANQ 293
Query: 297 FLLG-CPVIIGCIVG 310
L G P +G +G
Sbjct: 294 LLQGAHPFQVGKRLG 308
>gi|294628320|ref|ZP_06706880.1| methionyl-tRNA formyltransferase [Streptomyces sp. e14]
gi|292831653|gb|EFF90002.1| methionyl-tRNA formyltransferase [Streptomyces sp. e14]
Length = 310
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 103/314 (32%), Positives = 161/314 (51%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MKLVFAGTPEVAVPALDALIASGRHEVAAVVTRPDAPAG-RGRRLVASPVAERAEEAGIE 59
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K E+++ D VVAYG ++P+ L+ + G+ N H SLLP WRGAA
Sbjct: 60 VLKPAKPRDPEFQERLREIAPDCCPVVAYGALLPRTALDIPRHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q ++MAGD TG + +++ LD+GPV I + L L++ A +
Sbjct: 120 PVQHSLMAGDEITGASTFLIEEGLDSGPVYGTITEEIRPTDTSGDLLTRLALAGAGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ G+T A KI+ + RV++ A V +R +P PGAW
Sbjct: 180 TMDGIEDGTLKAVPQPAEGVTLAPKITVEDARVDWKAPALRVDRVVRGCTPAPGAWTTF- 238
Query: 241 IGNKHERIKLLESQLVEG--EGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+KL++ V + PG V + + AV ++ +Q G + + D
Sbjct: 239 ---RGERLKLIQVAPVPARTDLAPGALAVGKNSVHVGTGSYAVELLWVQAQGKKPMRAAD 295
Query: 297 FLLGCPVIIGCIVG 310
+ G + G ++G
Sbjct: 296 WARGVRIADGEVLG 309
>gi|311894798|dbj|BAJ27206.1| putative methionyl-tRNA formyltransferase [Kitasatospora setae
KM-6054]
Length = 310
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 97/310 (31%), Positives = 146/310 (47%), Gaps = 5/310 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT E AV L AL++S H +V+V T+P PAG RG K V S V ++A+E +
Sbjct: 1 MRLVFAGTPEVAVPALDALLASRHEVVAVVTRPDAPAG-RGRKLVASPVAQRAEEAGIEV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + G+ E+ D VVAYG +I L G+ N H SLLP WRGAAP
Sbjct: 60 LKPVRPGEPEFMARLAEIAPDCCPVVAYGALIRPGALEIPVHGWVNLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A+MAGD TG + ++++ LD+GPV + + + L L+ A +V
Sbjct: 120 VQHALMAGDEVTGASTFRIEEGLDSGPVYGVLTETVKPADTSGDLLGRLAHAGADLLVRT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
MD +E PQ G++ A K++ + R+ + A V +R +P PGAW
Sbjct: 180 MDAIEDGQARPEPQPLAGVSLAPKLTVEDARIEWTHPALRVDRVVRGCAPAPGAWTTFRG 239
Query: 242 GNKHERIKLLESQLVEGEGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ E PGE V + + V + ++ G + + D+
Sbjct: 240 ERLKVTGPV-RLLPGETALAPGELAVAKNSVRVGTGSHEVELGEVRPQGKKAMPAADWAR 298
Query: 300 GCPVIIGCIV 309
G + G
Sbjct: 299 GARIESGERF 308
>gi|189218178|ref|YP_001938820.1| methionyl-tRNA formyltransferase [Methylacidiphilum infernorum V4]
gi|238692087|sp|B3DXI7|FMT_METI4 RecName: Full=Methionyl-tRNA formyltransferase
gi|189185036|gb|ACD82221.1| Methionyl-tRNA formyltransferase [Methylacidiphilum infernorum V4]
Length = 320
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 91/315 (28%), Positives = 164/315 (52%), Gaps = 8/315 (2%)
Query: 3 LRVVFMGTSEFAVATLQAL-VSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+RVVF+GT +F V +L+A+ + ++I +V TQ +P G R + + S + + A + +
Sbjct: 2 MRVVFIGTGDFGVPSLEAIALDGRYTIPAVVTQADKPLG-RQKEVIPSPIKRTALKHHIW 60
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + Q + F D+ VV YG ++ + +L +G N H SLLP++RGA+
Sbjct: 61 VFQPENINSAGSIQQIQFLKPDLLVVCDYGQILSKAVLEIPSIGALNIHGSLLPKYRGAS 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AIM D ETG+ ++ MD+ +DTG + K+ + S L L+ L A +++
Sbjct: 121 PIQAAIMNRDKETGVTVIWMDEGIDTGDILMSDKLLVRSTDTAETLHHRLAELGARLIIQ 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+++ + P PQ +YA+KI K + +++ + + IRA +P+P A+ +
Sbjct: 181 SLEAIRAGKAPRIPQNNALASYAKKIKKEQALIDWTKDRHEIDAMIRAFNPWPVAFTTVW 240
Query: 241 IGNKHERIKLLESQLVE-GEGKPGEVIN---PNFTIACS-QGAVRIMRLQRAGGRVLDIG 295
IG + + +K+ + + +G PGEV+ +A G + + +Q G + +
Sbjct: 241 IGGEKKILKIFKVIISHRAKGMPGEVVRIDRHGILVAAGRSGGLLLREVQLEGRKRMHAA 300
Query: 296 DFLLGCPVIIGCIVG 310
DF G + IG ++G
Sbjct: 301 DFARGARLAIGTVLG 315
>gi|161610766|ref|YP_067164.2| methionyl-tRNA formyltransferase [Rickettsia typhi str. Wilmington]
gi|55584142|sp|O33582|FMT_RICTY RecName: Full=Methionyl-tRNA formyltransferase
Length = 303
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 108/310 (34%), Positives = 170/310 (54%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMGT EFAV TL+ L+ H + +V+TQ P+ G RGL S +H+ A E +P
Sbjct: 1 MKVIFMGTPEFAVPTLKKLI-IHHEVKAVFTQQPKAKG-RGLYLAKSPIHQLAFEHQIPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P+ E +AD+ VV+AYG ++P+ IL A K G N H S LPR RGAAP
Sbjct: 59 YSPSTLRNDETINLINKVDADIIVVIAYGFIVPKAILEAKKYGCLNIHPSDLPRHRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QR I+ GD ++ + IM+MD LDTG + + + I L + L A +++
Sbjct: 119 LQRTIIEGDLKSSVCIMRMDSGLDTGDILLKEDLNLEKRITLDELSNRCAHLGAELLIQT 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ Q NG+TYA K++K E ++N+ SA ++ IR ++P+PGA+
Sbjct: 179 LANIDNIVPV--KQSSNGVTYAHKLTKAEGKINWYESAYSIDCKIRGMNPWPGAYFSY-- 234
Query: 242 GNKHERIKLLESQLVEGEGK--PGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ IK+LE++ + PG VI+ IAC G +R+ +LQ+ + L+I FL
Sbjct: 235 --NDKIIKILEAEYLNYNHHFIPGTVISNKLEIACGSGILRVTKLQQESKKALNIEAFLR 292
Query: 300 GCPVIIGCIV 309
G ++ I+
Sbjct: 293 GTNILKDTIL 302
>gi|320105841|ref|YP_004181431.1| methionyl-tRNA formyltransferase [Terriglobus saanensis SP1PR4]
gi|319924362|gb|ADV81437.1| methionyl-tRNA formyltransferase [Terriglobus saanensis SP1PR4]
Length = 310
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 101/312 (32%), Positives = 163/312 (52%), Gaps = 8/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT +FAV TL+A++++ H + V +QP RP GR G + + + + A +L
Sbjct: 1 MKLIFCGTPQFAVPTLEAVLAAGHEVALVLSQPDRPVGRSG-EVQPTPIKQTALAHNLRV 59
Query: 63 LVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P KL EQ D ++VAYG +IPQ +L+ + G N H SLLPRWRGAA
Sbjct: 60 VQPEKLKSNAELREQIEGIAPDAILIVAYGRIIPQWMLDVPRFGNINLHGSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A+ AGD +TG+ M++D LDTG + R+VPI + + L EL+ + A V+
Sbjct: 120 PIQWAVAAGDEKTGVTTMRIDAGLDTGDMLLKREVPIGPHTTSPELFTELASIGAILTVQ 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ LE N+ Q + T A +++ + R+NF ++A+ ++N R P+PG + +
Sbjct: 180 TLQCLEAGNITPIKQNDAEATLAPILTREDGRINFAQTAQTIYNRFRGFQPWPGVFTSLR 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGE--VINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDF 297
S + PG V + +AC+ A+ + LQ G R + +F
Sbjct: 240 GKKLILHAMRPSSHPTQH--PPGTLFVEETHLLVACANQTAIFLEELQLEGKRRMPAEEF 297
Query: 298 LLGCPVIIGCIV 309
L G + G +
Sbjct: 298 LRGFQIKEGEQL 309
>gi|197103843|ref|YP_002129220.1| methionyl-tRNA formyltransferase [Phenylobacterium zucineum HLK1]
gi|229487505|sp|B4RDU2|FMT_PHEZH RecName: Full=Methionyl-tRNA formyltransferase
gi|196477263|gb|ACG76791.1| methionyl-tRNA formyltransferase [Phenylobacterium zucineum HLK1]
Length = 308
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 126/308 (40%), Positives = 172/308 (55%), Gaps = 2/308 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ F+GT +FAV L +V + H + VY+QPP P G RG + S VH A+ +P
Sbjct: 1 MRLAFLGTPDFAVQALAEIVEAGHEVACVYSQPPAPRG-RGHELRPSPVHAYAESRGIPV 59
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + E E F + D AVVVA+G ++P+ +L A +LG +N HASLLPRWRGAAP
Sbjct: 60 RTPASMRDPAEIEAFRALGLDAAVVVAFGQILPREVLEAPRLGSFNVHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIMAGD TG+ +M+M + LD GPV V I + A L L+ A +VE
Sbjct: 120 IQRAIMAGDAVTGVQVMRMTEGLDEGPVLSTATVRIDALETAATLHDRLAAAGAGLIVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ +PQ E G+TYA+KI E R+++ R V IR LSPFPGAW E+
Sbjct: 180 LAQIAAGRAVETPQAEAGVTYAKKIRPKEARIDWTRPGPEVDRKIRGLSPFPGAWFELPT 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
R+K L S + EG GE ++ + GAVR++R+QR G D FL G
Sbjct: 240 EKGPVRVKALLSAFEDAEGPAGETLDDRLLVGTGHGAVRLLRVQREGRGPQDAEAFLRGT 299
Query: 302 PVIIGCIV 309
V G +
Sbjct: 300 AVPAGVKL 307
>gi|317129259|ref|YP_004095541.1| methionyl-tRNA formyltransferase [Bacillus cellulosilyticus DSM
2522]
gi|315474207|gb|ADU30810.1| methionyl-tRNA formyltransferase [Bacillus cellulosilyticus DSM
2522]
Length = 318
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 99/315 (31%), Positives = 166/315 (52%), Gaps = 10/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT +FAV L LV + + + V TQP RP G R + V A+E +
Sbjct: 1 MKVVFMGTPDFAVPILNQLVENGYDVQLVVTQPDRPKG-RKQQLTAPPVKVAAEEHGIKV 59
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P +E++ + D+ + A+G ++P+ +L LG N HASLLP++RG AP
Sbjct: 60 FQPKKIKMEEQWRKVEEVQPDIIITAAFGQILPKGLLEIPPLGCINVHASLLPKYRGGAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I ++I+ G+ ETGI IM M + LD G + + +PI N T + +LS L A ++E
Sbjct: 120 IHQSIIDGERETGITIMYMVEKLDAGDILSQKAIPIEENDTTGSMHDKLSKLGATLLLET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +++ + Q E+ +TYA ISK + ++++ ++A ++N +R L+P+P A+ +
Sbjct: 180 LPEIQSGTIVAEEQAEDEVTYAPNISKEQEKIDWNKTAREIYNQVRGLAPWPVAYTTI-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
++ E + PG +IN IAC G+ + + LQ +G + +D+ F
Sbjct: 238 NGNRLKVWWTEETDETTKETPGTIINVEEGRILIACGNGSVLSMRELQPSGKKRMDVKTF 297
Query: 298 LLGCPV--IIGCIVG 310
LLG G +G
Sbjct: 298 LLGAGKDWSKGMKLG 312
>gi|119943872|ref|YP_941552.1| methionyl-tRNA formyltransferase [Psychromonas ingrahamii 37]
gi|166215503|sp|A1SR38|FMT_PSYIN RecName: Full=Methionyl-tRNA formyltransferase
gi|119862476|gb|ABM01953.1| methionyl-tRNA formyltransferase [Psychromonas ingrahamii 37]
Length = 316
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 111/314 (35%), Positives = 170/314 (54%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA L AL++S H++++VYTQP RPAG RG + SAV + A E +P
Sbjct: 3 KLNIIFAGTPDFAAKHLSALINSEHNVIAVYTQPDRPAG-RGKRLTASAVKELAMEQQIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + + L+ D+ +VVAYGL++PQ +L +LG N H SLLPRWRGAA
Sbjct: 62 VYQPANFKEVDSTKQLAALNADLMIVVAYGLLLPQLVLGIPRLGCLNVHGSLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD+ LDTG + PI + +A L ++L++ +V+
Sbjct: 122 PIQRAIWAGDTETGVTIMQMDEGLDTGDMLAKVSCPIERDETSASLYEKLALQAPDVLVD 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++KL + L Q YA+K+SK E +++ + A + IRA +P+P ++ +
Sbjct: 182 TINKLVKGELKAEKQDPQLACYAKKLSKSEALIDWSKDAVFIERCIRAFNPWPVSYFVLD 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
R L + E G +I +A +G + + LQ AG + L + D
Sbjct: 242 DKVIKVRQAGLLATKSEQTA--GTIITASKNGIQVATGEGIINLEVLQLAGKKALPVQDI 299
Query: 298 LLGCP--VIIGCIV 309
L G ++
Sbjct: 300 LNSRRELFAQGTLL 313
>gi|220931833|ref|YP_002508741.1| methionyl-tRNA formyltransferase [Halothermothrix orenii H 168]
gi|254789357|sp|B8CWS7|FMT_HALOH RecName: Full=Methionyl-tRNA formyltransferase
gi|219993143|gb|ACL69746.1| methionyl-tRNA formyltransferase [Halothermothrix orenii H 168]
Length = 316
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 163/317 (51%), Gaps = 10/317 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ +VFMG+ +FAV L+ L + +I +V TQP R G RG K + V + A + L
Sbjct: 1 MNIVFMGSPDFAVPGLEKLYNEPGITIKAVVTQPDRKKG-RGHKLRPTPVKQMAHKLGLK 59
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L + +EE+ + + VVVA+G + +++L G N HASLLPR+RGA+
Sbjct: 60 VLQTDNINREEFITNLRDLSPEAIVVVAFGQKLGKKVLELPSYGCINLHASLLPRYRGAS 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI RAI+ GD TG+ M MD+ DTG + + ++V I+ L +L+ + +V+
Sbjct: 120 PIHRAIINGDKVTGVTTMYMDEGWDTGDIIYKKEVKINREDTAGTLHDKLASIGGDLLVK 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ +E+ P Q E+ +YA KI + +++ RS+E++ N +R ++P+PGA+
Sbjct: 180 TLNDIEKGVAPREKQSEDKASYAYKIDRKIGELDWSRSSEDIFNLVRGVNPWPGAYTTWK 239
Query: 241 ---IGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ L + + + GEVI + AV+I+ LQ AG + +
Sbjct: 240 GKLLKIWWVEPLKLTVTENDKKMEAGEVITASQEDGIIVKTGDDAVKIIELQLAGRKKIT 299
Query: 294 IGDFLLGCPVIIGCIVG 310
F+LG + G +G
Sbjct: 300 ADKFVLGYNIKEGDKLG 316
>gi|238650435|ref|YP_002916287.1| methionyl-tRNA formyltransferase [Rickettsia peacockii str. Rustic]
gi|259646049|sp|C4K0Y8|FMT_RICPU RecName: Full=Methionyl-tRNA formyltransferase
gi|238624533|gb|ACR47239.1| methionyl-tRNA formyltransferase [Rickettsia peacockii str. Rustic]
Length = 303
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 104/310 (33%), Positives = 169/310 (54%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMGT EFAV L+ L+ + H + +V+TQ P+ G RGL S +H+ A E +P
Sbjct: 1 MKVIFMGTPEFAVPALKKLI-THHEVKAVFTQQPKAKG-RGLNLAKSPIHQLAFEHQIPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P+ E NAD+ VV+AYG ++P+ IL A K G N H S LPR RGAAP
Sbjct: 59 YTPSTLRNDEIINLINKVNADIIVVIAYGFIVPKAILEAKKYGCLNIHPSDLPRHRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QR I+ GD ++ + IM+MD LDTG + + I L + + L A +++
Sbjct: 119 LQRTIIEGDRKSSVCIMRMDTGLDTGDILMKEDFDLEERITLEELHNKCANLGAELLIKT 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ Q +G+TYA K++K E ++N+ SA + IR ++P+PG +
Sbjct: 179 LANIDNIVPIT--QPSDGVTYAHKLTKAEGKINWHESAYKIDCKIRGMNPWPGVYFSY-- 234
Query: 242 GNKHERIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ IK+LE++ + + G VI+ IAC G +R+ +LQ+ + L+I +FL
Sbjct: 235 --NDKIIKILEAEYLNADHHFTSGTVISDKLEIACGSGILRVKKLQQESKKALNIEEFLR 292
Query: 300 GCPVIIGCIV 309
G ++ ++
Sbjct: 293 GTNILKDTVL 302
>gi|297564645|ref|YP_003683617.1| methionyl-tRNA formyltransferase [Meiothermus silvanus DSM 9946]
gi|296849094|gb|ADH62109.1| methionyl-tRNA formyltransferase [Meiothermus silvanus DSM 9946]
Length = 313
Score = 175 bits (443), Expect = 9e-42, Method: Composition-based stats.
Identities = 96/313 (30%), Positives = 156/313 (49%), Gaps = 16/313 (5%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R+ F G+ +AV L+AL H +V V TQP +PAG RGL V ++A++ LP +
Sbjct: 9 RIAFFGSPAWAVPVLEALHD-HHQVVLVVTQPDKPAG-RGLLLTPPPVAQRARQLGLPVV 66
Query: 64 VPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + E EQ + N D AV AYG ++P +L + GF N H S LP++RG AP
Sbjct: 67 QPQKLRNNAEFVEQIKALNLDAAVTAAYGKILPAELLEVPRYGFLNLHPSDLPKYRGPAP 126
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q ++ GD ET + IM+ D +DTGPV + + + + L L ++EA
Sbjct: 127 VQWTLINGDPETAVCIMQTDPGMDTGPVVARWRTKVEPDEDAVQLANRLRDRGTQLLLEA 186
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE PQ G + V + +A+ +++ R + P+PG+W E
Sbjct: 187 LRNLEHL--TPEPQPPQGTHAPMLKKEDGR-VRWADAAQAIYDRHRGVQPWPGSWFE--- 240
Query: 242 GNKHERIKLLESQLVEGEG--KPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
++ +R+K++ + EG G G V+ + +A +GAV ++ +Q G R + D
Sbjct: 241 -HEGKRVKVISLRPWEGRGSAAAGAVLEVAPDSLIVAAGEGAVALLEVQPEGKRPMRAAD 299
Query: 297 FLLGCPVIIGCIV 309
+ G V +G +
Sbjct: 300 WARGYGVKVGTHL 312
>gi|6685123|gb|AAF23794.1|AF213822_9 methionyl-tRNA formyltransferase [Zymomonas mobilis subsp. mobilis
ZM4]
Length = 300
Score = 175 bits (443), Expect = 9e-42, Method: Composition-based stats.
Identities = 105/308 (34%), Positives = 156/308 (50%), Gaps = 10/308 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT +FA+ TL ALV + H IV+VY+QP RPAG RG S V K+A+E L
Sbjct: 1 MKIIFMGTPDFALPTLNALVDAGHEIVAVYSQPARPAG-RGKAPRPSPVEKRARELGLNV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E + F ADVAVV AYG P+ LNA F S P P
Sbjct: 60 YTPVSLKEAETQKIFADHQADVAVVAAYGCYYPRPFLNAAPWLFKCAWLS-SPEMAWRTP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRAI+AGD E+G+ IM+MD+ LDTG + + K PI+ A + + +
Sbjct: 119 VQRAILAGDQESGVTIMQMDRGLDTGAMLKIEKTPIADKNAGALSDEIAHIGAKLMVEVL 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ P Q E+G +YA KI K E ++F + ++ L P PGA+
Sbjct: 179 AQPEQ---YPPVKQPESGESYAAKIDKSEALIDFSKRCRELNGKFALLPPKPGAFFLY-- 233
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ERI++LE+ + G G+ +N + I C +++ + +QRAG + + + D L G
Sbjct: 234 --NEERIRILEAHVQNQAGAVGKTLNDHLLIGCGSNSLQPVIVQRAGRKAMKLEDNLRGF 291
Query: 302 PVIIGCIV 309
+ G +
Sbjct: 292 AIPRGTRL 299
>gi|257871147|ref|ZP_05650800.1| methionyl-tRNA formyltransferase [Enterococcus gallinarum EG2]
gi|257805311|gb|EEV34133.1| methionyl-tRNA formyltransferase [Enterococcus gallinarum EG2]
Length = 317
Score = 175 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 163/319 (51%), Gaps = 15/319 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +VVFMGT F+V L+ L++ + I +V TQP RP G R + V + A + L
Sbjct: 1 MT-KVVFMGTPAFSVPILEGLLAEGYEIAAVVTQPDRPVG-RKRVITPTPVKEAALKHQL 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E D+ V A+G +P+++L K G N HASLLP++RG
Sbjct: 59 LVLQPEKISGSPEMEMIKELAPDILVTAAFGQFLPEKLLQVPKFGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ AIM G+ ETG+ IM+M K +D G + K+PI++ + + ++LS+L ++
Sbjct: 119 APVHYAIMEGEPETGVTIMEMIKKMDAGGIFSQAKLPITNQDDVGTMFEKLSLLGKELLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + K+ L PQ E T++ I++ + +++ ++A+ + N +R + P+P A+
Sbjct: 179 KTLPKILSGELKPMPQAEEQATFSPNITQEQEAIDWTKTAQEIDNQVRGMRPWPIAFTTY 238
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEV---INPNFTIACSQG-AVRIMRLQRAGGRVLD 293
R K+ +V+ + PG + IAC Q + + LQ AG
Sbjct: 239 QGS----RWKIWSVAVVDETTDAAPGTIMQRTKKALWIACGQQTVLALEELQPAGKGRQS 294
Query: 294 IGDFLLGC--PVIIGCIVG 310
I FL G + +G VG
Sbjct: 295 IAAFLNGTGQHIQLGDKVG 313
>gi|284032218|ref|YP_003382149.1| methionyl-tRNA formyltransferase [Kribbella flavida DSM 17836]
gi|283811511|gb|ADB33350.1| methionyl-tRNA formyltransferase [Kribbella flavida DSM 17836]
Length = 308
Score = 175 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 8/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT E +V L+A+V+S H +V+V T+P PAG RG K V S V + A++ +
Sbjct: 1 MRLVFAGTPEVSVTALEAIVASGHDLVAVVTRPDAPAG-RGRKLVASPVAEYAEKLGVEV 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K ++ + D VVAYG ++PQ L+ G+ N H S+LP WRGAAP
Sbjct: 60 LKPVKPSDPDFLARLREIAPDCCPVVAYGGLLPQAALDIPPHGWINLHFSVLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q +I+AGD+ TG + ++ K LD GPV + PI N L L+ A +V+
Sbjct: 120 VQHSIIAGDDVTGASTFRIVKALDAGPVYGVLTEPIGPNDTAGDLLGRLASSGAKLLVDT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D +E L Q G++ A K++ + ++ A+ V +R +P PGAW
Sbjct: 180 LDGIEAGILEAREQPAEGVSIAPKLTVEDAEIDLSAPAQRVDRLVRGCNPSPGAWTTF-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ ER+K+L + L + E PG + T+ A++++ +Q G + + D+
Sbjct: 238 --RGERLKVLATALTDEELPPGAIRSTKAAVTVGTGSKAIQLVTVQPQGKKPMAAADWAR 295
Query: 300 GCPVIIGCIVG 310
G + +G
Sbjct: 296 GVRITDDDRLG 306
>gi|313890023|ref|ZP_07823659.1| methionyl-tRNA formyltransferase [Streptococcus pseudoporcinus SPIN
20026]
gi|313121614|gb|EFR44717.1| methionyl-tRNA formyltransferase [Streptococcus pseudoporcinus SPIN
20026]
Length = 310
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 161/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ ++S + +++V TQP R G R + ++ V + A ++
Sbjct: 1 MT-KIIFMGTPQFSATVLEGILSEGSYEVLAVVTQPDRAVG-RKKEIRMTPVKELALRYN 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L + P KL + + + ++ A L N HASLLP++RG
Sbjct: 59 LSLIQPEKLSGSQELEEIIALGADGIITAAFGQFLPSKLLNAVDFALNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AIM G+ E G+ IM+M K +D G + +PI N L ++L+V+ ++
Sbjct: 119 APIHYAIMNGEKEAGVTIMEMVKEMDAGDMVAKASIPILDTDNVGTLFEKLAVIGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+++ + NL PQ + T++ I+ + ++N + A + N +R ++P+P A +
Sbjct: 179 KSLPQYLSGNLKPIPQDHSQATFSPNITAEQEKLNLSQPARQIFNQVRGMNPWPVAHTIL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ E+ LVEG+G+PG++I IA GA+ + +Q AG + I D
Sbjct: 239 KG----QRFKIYEASLVEGQGQPGQIIEKTKKTLVIATGDGALSLQTVQPAGKPKMAITD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGVGRDLKVGDYFG 310
>gi|302345634|ref|YP_003813987.1| methionyl-tRNA formyltransferase [Prevotella melaninogenica ATCC
25845]
gi|302149786|gb|ADK96048.1| methionyl-tRNA formyltransferase [Prevotella melaninogenica ATCC
25845]
Length = 340
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 96/330 (29%), Positives = 159/330 (48%), Gaps = 28/330 (8%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M +R+VFMGT EFAV +L+ALV + +++V+V TQP +P GR + S V A E
Sbjct: 1 MKKENIRIVFMGTPEFAVESLKALVENGYNVVAVVTQPDKPVGRHQEQLQPSPVKLYALE 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+LP L P K+ ++ L VV ++P+ + + +LG +N HA+LLP++R
Sbjct: 61 HNLPVLQPVKMKDADFIDELRSYKADMQVVVAFRMLPEIVWSMPRLGTFNVHAALLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ G+ ETG+ +DK +DTG + + I + + L L A
Sbjct: 121 GAAPINWAVINGETETGVTTFFLDKDIDTGRIILQKPFAIPDTADVEYVYDGLMYLGAKI 180
Query: 178 MVEAMDKLEQNNLPLS---------------PQIENGI--TYAEKISKGETRVNFCRSAE 220
+E +D + S PQ+ +A KI K +N+ +SA+
Sbjct: 181 AMETIDLIASKLPKDSLDNVDFSAVLDGISAPQVCEDAELHHAPKIFKETCEINWNQSAK 240
Query: 221 NVHNHIRALSPFPGAWLEMMIGNKH----ERIKLLESQLVEGE--GKPGE--VINPNFTI 272
V++ +R LSP+PG W + + +K+ ++ + G PG V +
Sbjct: 241 KVYDFVRGLSPYPGTWSTLCSIEDNGVKPLVMKVYKTAKSDRTSVGTPGTLVVEKTRLYV 300
Query: 273 ACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
S + ++ +Q G + +D+ FL G
Sbjct: 301 NTSDNLLELLDIQLTGKKRMDVRSFLNGFK 330
>gi|329666301|pdb|3RFO|A Chain A, Crystal Structure Of Methyionyl-Trna Formyltransferase
From Bacillus Anthracis
gi|329666302|pdb|3RFO|B Chain B, Crystal Structure Of Methyionyl-Trna Formyltransferase
From Bacillus Anthracis
gi|329666303|pdb|3RFO|C Chain C, Crystal Structure Of Methyionyl-Trna Formyltransferase
From Bacillus Anthracis
gi|329666304|pdb|3RFO|D Chain D, Crystal Structure Of Methyionyl-Trna Formyltransferase
From Bacillus Anthracis
Length = 317
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 156/313 (49%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVF GT +F+V L+ L+ + ++ V TQP RP G R + V +A++ +P
Sbjct: 5 IKVVFXGTPDFSVPVLRRLIEDGYDVIGVVTQPDRPVG-RKKVLTPTPVKVEAEKHGIPV 63
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++EYE+ L+ D+ V A+G ++P IL A K G N HASLLP RG AP
Sbjct: 64 LQPLRIREKDEYEKVLALEPDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAP 123
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI G +TGI I + LD G + +V I T L +LS AH + +
Sbjct: 124 IHYAIXEGKEKTGITIXYXVEKLDAGDILTQVEVEIEERETTGSLFDKLSEAGAHLLSKT 183
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L Q L Q E +T+A I + + ++++ ++ E V+NHIR L+P+P A+ +
Sbjct: 184 VPLLIQGKLEPIKQNEEEVTFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA- 242
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ ++ E V + G ++ F +A V+I LQ +G + F
Sbjct: 243 -GQVVKVWWGEKVPVTKSAEAGTIVAIEEDGFVVATGNETGVKITELQPSGKKRXSCSQF 301
Query: 298 LLGCPVIIGCIVG 310
L G IG +G
Sbjct: 302 LRGTKPEIGTKLG 314
>gi|168207270|ref|ZP_02633275.1| methionyl-tRNA formyltransferase [Clostridium perfringens E str.
JGS1987]
gi|170661359|gb|EDT14042.1| methionyl-tRNA formyltransferase [Clostridium perfringens E str.
JGS1987]
Length = 309
Score = 175 bits (442), Expect = 1e-41, Method: Composition-based stats.
Identities = 94/312 (30%), Positives = 162/312 (51%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV +L++L+ + + +V+TQP RP G RG K +S V + A E ++P
Sbjct: 1 MKIVFMGTPDFAVPSLKSLI-NEFGVEAVFTQPDRPKG-RGKKLGMSPVKEVALEHNIPV 58
Query: 63 LVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E E+ S D +VVA+G ++P+ +L+ K G N HASLLP++RGAA
Sbjct: 59 YQPLRLKNEPETIEELKSMEPDFIIVVAFGQILPKEVLDIPKYGCINLHASLLPKFRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ +I+ G+ TG M MD LDTG + +V I+ N+ L L +V
Sbjct: 119 PLNWSIIKGEKVTGNTTMLMDVGLDTGDMLLKDEVEITDNMTAGELHDILMERGGELLVR 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + N + Q E YA ++K ++++ SA+++HN +R L+P+P A
Sbjct: 179 TIRGILNNEITPEKQNEEETCYASMLNKEIAKIDWSLSAQDIHNLVRGLNPWPVALTSY- 237
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ ++ + + +PG +I ++ + + I +LQ + L + F
Sbjct: 238 -DDLTMKVHQTRVEKGDSNKEPGTIIAVDKTGIKVSTGKDILVIEKLQFPNSKQLFVEQF 296
Query: 298 LLGCPVIIGCIV 309
+ G V IG ++
Sbjct: 297 INGNSVEIGKVL 308
>gi|313157796|gb|EFR57207.1| methionyl-tRNA formyltransferase [Alistipes sp. HGB5]
Length = 323
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 101/315 (32%), Positives = 158/315 (50%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT EFAV +L+ALV+ +++V+V T P +PAG RG K S V A E LP
Sbjct: 6 LRIVFMGTPEFAVPSLRALVAGGYNVVAVVTTPDKPAG-RGQKLHQSEVKLAALELGLPV 64
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E+ + + +V ++P+ I +LG +N HASLLP++RGAAPI
Sbjct: 65 LQPEKLKAPEFVEAMQALKPDLGIVIAFRMLPEVIWAMPRLGTFNLHASLLPQYRGAAPI 124
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ ETG+ ++ +D G + +VPI N + L + E +
Sbjct: 125 NWAVINGETETGVTTFLLNHEIDKGAIIAQVRVPILPKDNVGTMYDRLMHTGTALVTETV 184
Query: 183 DKLEQNNLPLSPQ---IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
D++ ++ Q E+ + A KI K + R+++ + N +R LSP+P AW EM
Sbjct: 185 DRIAAGDIQPMEQTGIDESRLHPAPKIFKEDCRIDWSWEGRRIVNFVRGLSPYPAAWTEM 244
Query: 240 MIGNKH--ERIKLLES--QLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVL 292
+ K+ + + G V + +AC+ G + + LQ AG + L
Sbjct: 245 RKEGETASLTAKIYAAAFEGAAHNKAAGTVESDGRTFIRVACADGWITLGELQIAGKKRL 304
Query: 293 DIGDFLLGCPVIIGC 307
+ + LLG IG
Sbjct: 305 PVRELLLGLR-DIGQ 318
>gi|149002038|ref|ZP_01826992.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP14-BS69]
gi|147759847|gb|EDK66837.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP14-BS69]
Length = 312
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 92/317 (29%), Positives = 157/317 (49%), Gaps = 13/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ + I++V TQP R G R + V + A+E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL + L +V A L + N HASLLPR RG
Sbjct: 59 LSIYQPEKLSGSPEMEDLMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ ++
Sbjct: 119 APIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGCDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNF-CRSAENVHNHIRALSPFPGAWLE 238
+ + ++ PQ + +T++ I E ++++ ++ + N IR ++P+P A
Sbjct: 179 DTLPAYIAGDIKPEPQDTSQVTFSPNIKPKEEKLDWKNKTNRQLFNQIRGMNPWPVAHTF 238
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI
Sbjct: 239 LKGD----RFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIA 294
Query: 296 DFLL--GCPVIIGCIVG 310
FL G + +G G
Sbjct: 295 SFLNGVGRTLTVGERFG 311
>gi|239939912|ref|ZP_04691849.1| methionyl-tRNA formyltransferase [Streptomyces roseosporus NRRL
15998]
gi|239986398|ref|ZP_04707062.1| methionyl-tRNA formyltransferase [Streptomyces roseosporus NRRL
11379]
gi|291443344|ref|ZP_06582734.1| methionyl-tRNA formyltransferase [Streptomyces roseosporus NRRL
15998]
gi|291346291|gb|EFE73195.1| methionyl-tRNA formyltransferase [Streptomyces roseosporus NRRL
15998]
Length = 310
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 105/314 (33%), Positives = 162/314 (51%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MKLVFAGTPEVAVPALDALIASDRHEVAAVVTRPDAPAG-RGRRLVASPVAERAEEAGIE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K EE+ + D VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 60 VLKPVKPRDEEFLARLREIAPDCCPVVAYGALLPKVALDVPARGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q ++MAGD TG + +++ LD+GPV + I + L L+ A +
Sbjct: 120 PVQHSLMAGDEVTGASTFLIEEGLDSGPVYGVLTEEIRPTDTSGDLLTRLAFAGAGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E + L PQ G+T A KI+ + +V + A V IR +P PGAW
Sbjct: 180 TMDGIEDDTLHAVPQPHEGVTLAPKITVEDAQVQWSAPALRVDRVIRGCTPAPGAWTLF- 238
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+KL+++ V + PGE+ N + AV ++ +Q G + + D
Sbjct: 239 ---RGERLKLIQATPVLDRTDLAPGELSAAKNNVHVGTGSHAVELLWVQPQGKKPMRAAD 295
Query: 297 FLLGCPVIIGCIVG 310
+ G + G ++G
Sbjct: 296 WARGVRIAHGELLG 309
>gi|218295866|ref|ZP_03496646.1| methionyl-tRNA formyltransferase [Thermus aquaticus Y51MC23]
gi|218243604|gb|EED10132.1| methionyl-tRNA formyltransferase [Thermus aquaticus Y51MC23]
Length = 304
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 103/312 (33%), Positives = 161/312 (51%), Gaps = 14/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV F GT +AV L AL + H +V V TQP +P G RGLK S V + A E LP
Sbjct: 1 MRVAFFGTPSWAVPVLDAL-NRYHQVVLVVTQPDKPKG-RGLKPAPSPVAQYALEHGLPL 58
Query: 63 LVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P +L E F + + +VAV AYG ++P+ +L GF N H SLLP++RG A
Sbjct: 59 LKPERLKGNEEFLETFRAASPEVAVTAAYGKILPKEVLEVPPYGFLNLHPSLLPKYRGPA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ A++ G+ ETG+AIMK ++ LDTGP+ + + I + L + L +++
Sbjct: 119 PVPWALIRGEKETGVAIMKTEEGLDTGPLYALWRTEILPEEDAVALSERLRDKGIELLLK 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L PQ A ++K E R+ F SAE ++N R + P+PG+
Sbjct: 179 VLQDLPHLTPT--PQEGEASY-APLLTKEEGRIRFGESAEAIYNRHRGVQPWPGSHFF-- 233
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ R+K+L+ + G+G+PG V + +G +R++ +Q G R + D+
Sbjct: 234 --HEGRRVKVLKMRPEPGQGEPGVVQAVGREGVLVGTGEGLIRLLEVQPEGRRPMPAADW 291
Query: 298 LLGCPVIIGCIV 309
G V+ G +
Sbjct: 292 ARGYGVLPGTRL 303
>gi|239932442|ref|ZP_04689395.1| methionyl-tRNA formyltransferase [Streptomyces ghanaensis ATCC
14672]
gi|291440808|ref|ZP_06580198.1| methionyl-tRNA formyltransferase [Streptomyces ghanaensis ATCC
14672]
gi|291343703|gb|EFE70659.1| methionyl-tRNA formyltransferase [Streptomyces ghanaensis ATCC
14672]
Length = 310
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 107/314 (34%), Positives = 161/314 (51%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MKLVFAGTPEVAVPALDALLASGRHEVAAVVTRPDAPAG-RGRRLVASPVAERAEEAGIE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + E+ E+ D VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 60 VLKPVRPRDPEFLERLKEIEPDCCPVVAYGALLPRAALDIPARGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AIMAGD TG + +++ LD+GPV I + L L+ A +
Sbjct: 120 PVQHAIMAGDEITGASTFLIEEGLDSGPVYGTVTEEIRPTDTSGDLLTRLAFAGAGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ G+T A K++ + RV+F A V +R +P PGAW
Sbjct: 180 TMDGIEDGTLQAVPQPAEGVTLAPKVAVEDARVDFTAPALRVDRVVRGCTPAPGAWTTF- 238
Query: 241 IGNKHERIKLLESQLVEG--EGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+K++++ V G + +PG V N + AV ++ +Q G + + D
Sbjct: 239 ---RGERLKIVQAAPVPGRTDLEPGRLAVGKNNVYVGTGSYAVELLWVQAQGKKPMRAAD 295
Query: 297 FLLGCPVIIGCIVG 310
+ G + G VG
Sbjct: 296 WARGARIAAGESVG 309
>gi|109896354|ref|YP_659609.1| methionyl-tRNA formyltransferase [Pseudoalteromonas atlantica T6c]
gi|123065190|sp|Q15ZY3|FMT_PSEA6 RecName: Full=Methionyl-tRNA formyltransferase
gi|109698635|gb|ABG38555.1| methionyl-tRNA formyltransferase [Pseudoalteromonas atlantica T6c]
Length = 315
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 124/317 (39%), Positives = 172/317 (54%), Gaps = 11/317 (3%)
Query: 1 MT--LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M L++VF GT EFA L AL+ S H +++ YTQP RPAG RG K SAV + AQ+
Sbjct: 1 MKSGLKIVFAGTPEFAANHLSALIESEHQVIAAYTQPDRPAG-RGKKLHASAVKQLAQQH 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+P P L EE +Q L+ DV VVVAYGL++PQ IL+ K G N H SLLP+WR
Sbjct: 60 DIPVYQPASLKSEEAQQQLAALNADVMVVVAYGLILPQIILDTPKYGCLNVHGSLLPKWR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPIQRAI AGD ETG+ IM+MDK LDTG V ++ I+ +A L +L+ L
Sbjct: 120 GAAPIQRAIWAGDAETGVTIMQMDKGLDTGAVLSELRLAITPIDTSATLYTKLAELGPKG 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
++E + +L Q TYAEK+SK E ++++ +A + ++RA P+P A+
Sbjct: 180 LLETL--ASLGDLTPQAQDNTLATYAEKLSKQEAKIDWTMTAAQLERNVRAFDPWPVAYF 237
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
E R ++ + KPG++I + G + I LQ G + L
Sbjct: 238 EANGAAIKVRSAEVQQTPICDNAKPGQIIQADKHAIGVQTGDGVLLIKTLQLPGKKPLAT 297
Query: 295 GDFLLGCP--VIIGCIV 309
D L G +G I+
Sbjct: 298 QDILNGHSDWFSVGTIL 314
>gi|24378966|ref|NP_720921.1| methionyl-tRNA formyltransferase [Streptococcus mutans UA159]
gi|24376855|gb|AAN58227.1|AE014894_4 putative methionyl-tRNA formyltransferase [Streptococcus mutans
UA159]
Length = 315
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 89/316 (28%), Positives = 156/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ S + +++V TQP R G R + ++ V + A E
Sbjct: 5 MT-KLIFMGTPDFSATVLKGLLEDSHYHVLAVVTQPDRAVG-RKKEIKMTPVKQLALEHG 62
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL L +V A IL + N HASLLP++RG
Sbjct: 63 LKVYQPEKLSGSSEMVELMNLGADGIVTAAFGQFLPMILINSVDFAVNVHASLLPKYRGG 122
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ GD + G+ IM+M K +D G + PI+ + + ++L+++ ++
Sbjct: 123 APIHYAIINGDKKAGVTIMEMVKEMDAGDMIAKASTPITDADDVGTMFEKLAIIGRDLLL 182
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + Q ++ T++ IS E ++++ +SA ++ N +R ++P+P A +
Sbjct: 183 QTLPGYLSGKIEPQAQDDSQATFSPNISSQEEKIDWSKSARDIFNQVRGMNPWPVAHTLL 242
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ ++V G G PGE+I +A +Q A+ + +Q AG + I D
Sbjct: 243 ----DGKRFKIYAVEVVNGAGNPGEIIEKTKKALIVAANQDALSLKLVQPAGKPKMSITD 298
Query: 297 FLLGC--PVIIGCIVG 310
FL G + +G G
Sbjct: 299 FLNGLGQKLKVGDYFG 314
>gi|33516865|sp|Q8DVK4|FMT_STRMU RecName: Full=Methionyl-tRNA formyltransferase
Length = 311
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 89/316 (28%), Positives = 156/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ S + +++V TQP R G R + ++ V + A E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLEDSHYHVLAVVTQPDRAVG-RKKEIKMTPVKQLALEHG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL L +V A IL + N HASLLP++RG
Sbjct: 59 LKVYQPEKLSGSSEMVELMNLGADGIVTAAFGQFLPMILINSVDFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ GD + G+ IM+M K +D G + PI+ + + ++L+++ ++
Sbjct: 119 APIHYAIINGDKKAGVTIMEMVKEMDAGDMIAKASTPITDADDVGTMFEKLAIIGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + Q ++ T++ IS E ++++ +SA ++ N +R ++P+P A +
Sbjct: 179 QTLPGYLSGKIEPQAQDDSQATFSPNISSQEEKIDWSKSARDIFNQVRGMNPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ ++V G G PGE+I +A +Q A+ + +Q AG + I D
Sbjct: 239 ----DGKRFKIYAVEVVNGAGNPGEIIEKTKKALIVAANQDALSLKLVQPAGKPKMSITD 294
Query: 297 FLLGC--PVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGLGQKLKVGDYFG 310
>gi|71905664|ref|YP_283251.1| methionyl-tRNA formyltransferase [Dechloromonas aromatica RCB]
gi|123747051|sp|Q47K50|FMT_DECAR RecName: Full=Methionyl-tRNA formyltransferase
gi|71845285|gb|AAZ44781.1| methionyl-tRNA formyltransferase [Dechloromonas aromatica RCB]
Length = 307
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 125/311 (40%), Positives = 182/311 (58%), Gaps = 12/311 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA LQ +V++ H + V TQP RPAG RG+ SAV K A +
Sbjct: 1 MKLIFAGTPEFAAQALQGIVNAGHEVALVLTQPDRPAG-RGMALQPSAVKKVALTHGIEV 59
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P T E + + A++ VV AYGL++PQ +L+ + G N H SLLPRWRGAAP
Sbjct: 60 FQPLTLKDAEAQARIAAVGAEIMVVAAYGLILPQVVLDMPRFGCINIHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA++AGD ETG+ IM+M+ LDTGPV PI++ TA L L+ L A +
Sbjct: 120 IQRALLAGDAETGVCIMQMEAGLDTGPVLLRGAFPIAATDTTATLHDRLAELGARLV--- 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ L + LP PQ +G+TYA+KI K E +++ +SA + HIRA +PFPGA
Sbjct: 177 VEALGKLPLPAEPQPADGVTYAQKIEKAEAMIDWSKSAAELDRHIRAFNPFPGAQALF-- 234
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ + +KL ++ V G G+ G ++ + IAC +GA+ + LQ+AGG+ L + FL
Sbjct: 235 --RGQTVKLWQASPVAGRGETGAILAVDKNSIIIACGEGALAVTELQKAGGKRLPVQQFL 292
Query: 299 LGCPVIIGCIV 309
G P+ +G
Sbjct: 293 AGHPLAVGDRF 303
>gi|94971254|ref|YP_593302.1| methionyl-tRNA formyltransferase [Candidatus Koribacter versatilis
Ellin345]
gi|123256132|sp|Q1IIS2|FMT_ACIBL RecName: Full=Methionyl-tRNA formyltransferase
gi|94553304|gb|ABF43228.1| methionyl-tRNA formyltransferase [Candidatus Koribacter versatilis
Ellin345]
Length = 312
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 159/313 (50%), Gaps = 10/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VF GT FAV +L+ +V + H + V TQP RP G RG+ S V A +LP
Sbjct: 1 MILVFCGTPRFAVPSLEHIVRAGHDVRLVVTQPDRPKG-RGMGLAFSPVKDAALALNLPV 59
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ E + + D +VV YG +IPQ +++ LG N HASLLP++RGAA
Sbjct: 60 TQPEKIKNNEEFRAQLSAIAPDAIIVVGYGRIIPQWMIDLPPLGNINVHASLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI G+ TG+ MK+D LDTG + ++PI+ + L L+ L A +VE
Sbjct: 120 PIQWAIAMGEAVTGVTTMKIDAGLDTGDMLLQAEMPIAPEDTSESLAPRLAELGAELLVE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +LE + PQ T A + K + +++F RSA+ + N +R +P+PGA+ +
Sbjct: 180 TLARLEGGVIAAVPQNHAEHTLAPILKKEDGQIDFHRSAQEILNRLRGFTPWPGAFTQFR 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGE--VINPNFTIACS-QGAVRIMRLQRAGGRVLDIGDF 297
+ +++ V +PGE + N + A+ ++ +Q G + + DF
Sbjct: 240 GKGFF----IHQARAVAATLEPGELRIEGENLLVGAGHNTALELLEIQLEGKKRMPARDF 295
Query: 298 LLGCPVIIGCIVG 310
+ G +G
Sbjct: 296 INGYRPNSADKLG 308
>gi|290581016|ref|YP_003485408.1| putative methionyl-tRNA formyltransferase [Streptococcus mutans
NN2025]
gi|254997915|dbj|BAH88516.1| putative methionyl-tRNA formyltransferase [Streptococcus mutans
NN2025]
Length = 311
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 88/316 (27%), Positives = 156/316 (49%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ L+ L+ S + +++V TQP R G R + ++ V + A E
Sbjct: 1 MT-KLIFMGTPDFSATVLKGLLEDSHYHVLAVVTQPDRAVG-RKKEIKMTPVKQLALEHG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P KL L +V A +L + N HASLLP++RG
Sbjct: 59 LKVYQPEKLSGSSEMVELMNLGADGIVTAAFGQFLPMVLINSVDFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ GD + G+ IM+M K +D G + PI+ + + ++L+++ ++
Sbjct: 119 APIHYAIINGDKKAGVTIMEMVKEMDAGDMIAKASTPITDADDVGTMFEKLAIIGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + Q ++ T++ IS E ++++ +SA ++ N +R ++P+P A +
Sbjct: 179 QTLPGYLSGKIEPQAQDDSQATFSPNISSQEEKIDWSKSARDIFNQVRGMNPWPVAHTLL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R K+ ++V G G PGE+I +A +Q A+ + +Q AG + I D
Sbjct: 239 ----DGKRFKIYAVEVVNGAGNPGEIIEKTKKALIVAANQDALSLKLVQPAGKPKMSITD 294
Query: 297 FLLGC--PVIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGLGQKLKVGDYFG 310
>gi|21219975|ref|NP_625754.1| methionyl-tRNA formyltransferase [Streptomyces coelicolor A3(2)]
gi|23821562|sp|Q9L0Y6|FMT_STRCO RecName: Full=Methionyl-tRNA formyltransferase
gi|7209233|emb|CAB76895.1| methionyl-tRNA formyltransferase [Streptomyces coelicolor A3(2)]
Length = 310
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 103/314 (32%), Positives = 161/314 (51%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MKLVFAGTPEVAVPALDALIASGRHEVAAVVTRPDAPAG-RGRRLVASPVAERAEEAGIE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K ++ E+ D VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 60 VLKPAKPRDPDFLERLREIAPDCCPVVAYGALLPRVALDVPARGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A+MAGD TG + +++ LD+GPV + + L L+ A +
Sbjct: 120 PVQHALMAGDEITGASTFLIEEGLDSGPVYGTVTETVRPTDTSGDLLTRLAFAGAGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E +L PQ G+T A KI+ + RV++ A V +R +P PGAW
Sbjct: 180 TMDGIEDGSLEAVPQPAEGVTLAPKITVEDARVDWTAPALRVDRVVRGCTPAPGAWTTF- 238
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+KL+++ + + PG++ N + AV ++ +Q G + + D
Sbjct: 239 ---RGERLKLVQAVPLPDRSDLAPGQLAAGKNNVYVGTGSHAVELLWVQAQGKKPMRAAD 295
Query: 297 FLLGCPVIIGCIVG 310
+ G + G VG
Sbjct: 296 WARGARITEGERVG 309
>gi|256788926|ref|ZP_05527357.1| methionyl-tRNA formyltransferase [Streptomyces lividans TK24]
Length = 310
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 103/314 (32%), Positives = 160/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MKLVFAGTPEVAVPALDALIASGRHEVAAVVTRPDAPAG-RGRRLVASPVAERAEEAGIE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K + E+ D VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 60 VLKPAKPRDPGFLERLREIAPDCCPVVAYGALLPRVALDVPARGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A+MAGD TG + +++ LD+GPV + + L L+ A +
Sbjct: 120 PVQHALMAGDEITGTSTFLIEEGLDSGPVYGTVTETVRPTDTSGDLLTRLAFAGAGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E +L PQ G+T A KI+ + RV++ A V +R +P PGAW
Sbjct: 180 TMDGIEDGSLEAVPQPAEGVTLAPKITVEDARVDWTAPALRVDRVVRGCTPAPGAWTTF- 238
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+KL+++ + + PG++ N + AV ++ +Q G + + D
Sbjct: 239 ---RGERLKLVQAVPLPDRSDLAPGQLAAGKNNVYVGTGSHAVELLWVQAQGKKPMRAAD 295
Query: 297 FLLGCPVIIGCIVG 310
+ G + G VG
Sbjct: 296 WARGARITEGERVG 309
>gi|302561750|ref|ZP_07314092.1| methionyl-tRNA formyltransferase [Streptomyces griseoflavus Tu4000]
gi|302479368|gb|EFL42461.1| methionyl-tRNA formyltransferase [Streptomyces griseoflavus Tu4000]
Length = 330
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 104/315 (33%), Positives = 160/315 (50%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+R+VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 20 PMRLVFAGTPEVAVPALDALLASGRHEVAAVVTRPDAPAG-RGRRLVASPVAERAEEAGI 78
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P + E+ E+ D VVAYG ++P+ L+ G+ N H SLLP WRGA
Sbjct: 79 EVLKPARPRDPEFLERLTEIAPDCCPVVAYGALLPRAALDIPARGWVNLHFSLLPAWRGA 138
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+Q AIMAGD TG A +++ LD+GPV I + L L+ + +
Sbjct: 139 APVQHAIMAGDEITGAATFLIEEGLDSGPVYGTVTEEIRPTDTSGDLLTRLAFAGSGLLA 198
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
MD +E L PQ +GI+ A K++ + V++ A V +R +P PGAW
Sbjct: 199 ATMDGIEDGTLKAVPQPADGISLAPKVTVEDAHVDWNTPALRVDRVVRGCTPAPGAWTTF 258
Query: 240 MIGNKHERIKLLESQLVEG--EGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ ER+K++++ V + PG++ N + AV ++ +Q G + +
Sbjct: 259 ----RGERLKIVQAATVPSLTDLAPGQLSAGKNNVYVGTGSYAVELLWVQAQGKKPMRAA 314
Query: 296 DFLLGCPVIIGCIVG 310
D+ G + G VG
Sbjct: 315 DWARGARITAGESVG 329
>gi|289772814|ref|ZP_06532192.1| methionyl-tRNA formyltransferase [Streptomyces lividans TK24]
gi|289703013|gb|EFD70442.1| methionyl-tRNA formyltransferase [Streptomyces lividans TK24]
Length = 342
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 103/314 (32%), Positives = 160/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 33 MKLVFAGTPEVAVPALDALIASGRHEVAAVVTRPDAPAG-RGRRLVASPVAERAEEAGIE 91
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K + E+ D VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 92 VLKPAKPRDPGFLERLREIAPDCCPVVAYGALLPRVALDVPARGWVNLHFSLLPAWRGAA 151
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A+MAGD TG + +++ LD+GPV + + L L+ A +
Sbjct: 152 PVQHALMAGDEITGTSTFLIEEGLDSGPVYGTVTETVRPTDTSGDLLTRLAFAGAGLLAA 211
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E +L PQ G+T A KI+ + RV++ A V +R +P PGAW
Sbjct: 212 TMDGIEDGSLEAVPQPAEGVTLAPKITVEDARVDWTAPALRVDRVVRGCTPAPGAWTTF- 270
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+KL+++ + + PG++ N + AV ++ +Q G + + D
Sbjct: 271 ---RGERLKLVQAVPLPDRSDLAPGQLAAGKNNVYVGTGSHAVELLWVQAQGKKPMRAAD 327
Query: 297 FLLGCPVIIGCIVG 310
+ G + G VG
Sbjct: 328 WARGARITEGERVG 341
>gi|262384495|ref|ZP_06077629.1| methionyl-tRNA formyltransferase [Bacteroides sp. 2_1_33B]
gi|301309116|ref|ZP_07215060.1| methionyl-tRNA formyltransferase [Bacteroides sp. 20_3]
gi|262293788|gb|EEY81722.1| methionyl-tRNA formyltransferase [Bacteroides sp. 2_1_33B]
gi|300832798|gb|EFK63424.1| methionyl-tRNA formyltransferase [Bacteroides sp. 20_3]
Length = 324
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 96/316 (30%), Positives = 156/316 (49%), Gaps = 14/316 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV +L+ALV +++V V T P +P GR G SAV + A
Sbjct: 1 MKKEDLRIVYMGTPDFAVESLRALVEGGYNVVGVITMPDKPMGRHGSVLQPSAVKQYAVS 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P KL E + + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 61 VGLPVLQPEKLKDEAFLEELRALRADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETG+ + +DTG + + +PI+ + + L + A
Sbjct: 121 GAAPINWAVINGDTETGVTTFFLTHEIDTGKIIRQKHLPIADTDDVETVHDALMAMGAGL 180
Query: 178 MVEAMDKLEQNNLPLSPQ-----IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ E +D L PQ + A KI K +++ + + +++ +R LSP+
Sbjct: 181 VTETVDLLLDGKTDAIPQEEFYKDAAELRPAPKIFKDTCHIDWNQPVKKIYDFVRGLSPY 240
Query: 233 PGAWLEMMIGN---KHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQR 286
P AW E++ + ++ E + G + + +A G +R+ LQ
Sbjct: 241 PAAWTELISADGKRMVLKVYQTEKRPATHNFPVGSIHTDHKSYIDVAVKDGFLRLHSLQL 300
Query: 287 AGGRVLDIGDFLLGCP 302
AG + ++I DFL G
Sbjct: 301 AGKKRMNITDFLNGFK 316
>gi|326800937|ref|YP_004318756.1| methionyl-tRNA formyltransferase [Sphingobacterium sp. 21]
gi|326551701|gb|ADZ80086.1| Methionyl-tRNA formyltransferase [Sphingobacterium sp. 21]
Length = 308
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 94/309 (30%), Positives = 152/309 (49%), Gaps = 8/309 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT EFAVA+L AL+ + ++V+V T +PAG RG K SAV K A +P
Sbjct: 1 MRIIFMGTPEFAVASLSALLEAGENVVAVVTVADKPAG-RGQKVQESAVKKFALSKGIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL ++ L+ VV ++P+ + N G N HASLLP++RGAAPI
Sbjct: 60 LQPDKLKDPDFINALAAYQADLQVVVAFRMLPEVVWNMPPKGTVNLHASLLPQYRGAAPI 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A+M G+ ETG+ + +DTG + +V I ++ + +L + A +V+ +
Sbjct: 120 NHAVMNGERETGVTTFFLQHEIDTGNILLSERVSIEADDTAGDIHDKLMYVGAELLVKTV 179
Query: 183 DKLEQNNLPLSPQ----IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + PQ E + +A KI K + ++ + R E V+N IR LSP+P A+
Sbjct: 180 QLIKADKHHEIPQASIADERKLKHAPKIFKDDCKIQWERPVEEVYNFIRGLSPYPAAFTV 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIG 295
V E +PG ++ G + +++LQ G + + +
Sbjct: 240 FQGKTLKIFACRPLKGPVPSEKEPGSIVTDGKHYLRFTTRDGYLDVLQLQLEGKKKMSVE 299
Query: 296 DFLLGCPVI 304
+FL G
Sbjct: 300 EFLRGARFE 308
>gi|323345670|ref|ZP_08085893.1| methionyl-tRNA formyltransferase [Prevotella oralis ATCC 33269]
gi|323093784|gb|EFZ36362.1| methionyl-tRNA formyltransferase [Prevotella oralis ATCC 33269]
Length = 336
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 94/308 (30%), Positives = 162/308 (52%), Gaps = 10/308 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR++FMGT EFAV +L+ LV + +++V+V TQP +P GR SAV A E +P
Sbjct: 19 LRIIFMGTPEFAVGSLKKLVENGYNVVAVVTQPDKPVGRHHYTLHPSAVKVFATEHGIPV 78
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P K+ + + + L +V ++P+ + + G +N HA+LLP++RGAAPI
Sbjct: 79 LQPVKMKDQSFVEELQSYHADLQIVVAFRMLPEVVWAMPRFGTFNVHAALLPQYRGAAPI 138
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ TG+ +D+++DTG + ++ PI + + A + L L + +E +
Sbjct: 139 NWAVINGETLTGVTTFFLDRNIDTGRIIMKKEFPIPDDADAAYVYDGLMRLGSELCIETV 198
Query: 183 DKLE--QNNLPLSPQIENGIT--YAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
D++ N+P PQ + +A KI K +++ R A+NV++ +R LSP P AW
Sbjct: 199 DRIIATDGNVPSVPQPDMEGNLKFAPKIFKETCEIDWHRRAKNVYDFVRGLSPIPAAWTT 258
Query: 239 MM--IGNKHERIKLLES----QLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVL 292
++ + K +K+ + + E +V + +A + + I LQ AG + +
Sbjct: 259 LVNDVNGKSIVLKIYRTVKTYRPCTAEAGILQVDKTHLYMATADNWLEITELQPAGKKRM 318
Query: 293 DIGDFLLG 300
DFL G
Sbjct: 319 TAKDFLNG 326
>gi|332304408|ref|YP_004432259.1| methionyl-tRNA formyltransferase [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332171737|gb|AEE20991.1| methionyl-tRNA formyltransferase [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 315
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 121/317 (38%), Positives = 171/317 (53%), Gaps = 11/317 (3%)
Query: 1 MT--LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M L +VF GT EFA L AL+ S H +V+ YTQP RPAG RG K SAV + A++
Sbjct: 1 MKSGLNIVFAGTPEFAATHLAALLQSEHQVVAAYTQPDRPAG-RGKKLQASAVKQLAEQH 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+P P L EE +Q L+ DV VVVAYGL++PQ IL+ K G N H SLLP+WR
Sbjct: 60 DIPVYQPASLKSEEAQQQLAALNADVMVVVAYGLILPQTILDTPKHGCLNVHGSLLPKWR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPIQRAI AGD ETG+ IM+MDK LDTG + ++ I +A L +L+ L
Sbjct: 120 GAAPIQRAIWAGDAETGVTIMQMDKGLDTGDMLHELRITIEPTDTSATLYSKLAELGPKG 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
++E + L Q TYAEK+SK E ++++ +A + ++RA P+P A+
Sbjct: 180 LIETLASLSDITPKA--QDNQLATYAEKLSKQEAKIDWNMTAAQLERNVRAFDPWPVAFF 237
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
E R +++ + PG+++ + +G + I LQ G + L+
Sbjct: 238 ETNNAAVKVRSAQVQATSAQSAAVPGQIVQADKHAIGVQTGEGILLINTLQLPGKKPLET 297
Query: 295 GDFLLGCP--VIIGCIV 309
D L G +G I+
Sbjct: 298 QDILNGHSDWFSVGTIL 314
>gi|297195545|ref|ZP_06912943.1| methionyl-tRNA formyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297152838|gb|EDY65274.2| methionyl-tRNA formyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 330
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 103/315 (32%), Positives = 162/315 (51%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A + +
Sbjct: 16 PMKLVFAGTPEVAVPALDALIASDRHEVAAVVTRPDAPAG-RGRRLVASPVAQRAADAGI 74
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P + E++ + D VVAYG ++P+ L+ G+ N H SLLP WRGA
Sbjct: 75 EVLKPARPRDEDFLARLREIGPDCCPVVAYGALLPKAALDVPVHGWVNLHFSLLPAWRGA 134
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+Q AI+AGD TG A ++++ LDTGPV + P+ + L L+ A +
Sbjct: 135 APVQHAILAGDEMTGAATFRIEEGLDTGPVYGVITEPVRPTDTSGDLLTRLAFAGAGLLA 194
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
MD +E L PQ +G++ A KI+ + V++ A V +R +P PGAW
Sbjct: 195 ATMDGIEDGTLRPVPQSADGVSLAPKITVEDAHVDWTAPALRVDRVVRGCTPAPGAWTAF 254
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ ER+KL++ L+ + PGE+ + + AV ++ +Q G + +
Sbjct: 255 ----RGERLKLVQVALLPDRKDLAPGELDAGKNHVHVGTGSHAVELLWVQPQGKKPMRAA 310
Query: 296 DFLLGCPVIIGCIVG 310
D+ G + G VG
Sbjct: 311 DWARGVRIAPGERVG 325
>gi|113475441|ref|YP_721502.1| methionyl-tRNA formyltransferase [Trichodesmium erythraeum IMS101]
gi|123352416|sp|Q114P5|FMT_TRIEI RecName: Full=Methionyl-tRNA formyltransferase
gi|110166489|gb|ABG51029.1| methionyl-tRNA formyltransferase [Trichodesmium erythraeum IMS101]
Length = 336
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 101/330 (30%), Positives = 155/330 (46%), Gaps = 25/330 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++F GT FAV TL+ L+ + + +V TQP + G RG K + S V A ++P
Sbjct: 2 MKIIFFGTPLFAVPTLKKLLDNPKIEVTAVVTQPDKRRG-RGNKLIPSPVKSVAVAHNIP 60
Query: 62 ALVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ + ADV VVVAYG ++ IL KLG N H S+LP++RGA
Sbjct: 61 VWQPRRVKKNPETLNLLREAQADVFVVVAYGQILSTEILEMPKLGCVNVHGSILPKYRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ +I G+ ETG M MD +DTGP+ +PI N + + L+ A ++
Sbjct: 121 APIQWSIYHGEAETGNTTMLMDVGMDTGPMLLKSIIPIGLLDNAVSIAEILAKDGADLLL 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL-- 237
E + +LE + PQ + TYA I + +++ RSA ++HN IR P
Sbjct: 181 ETLLRLEDKEIEPIPQDNSLATYAPLIQNSDYEIDWSRSALDIHNQIRGFFPNCFTSFRG 240
Query: 238 -------------EMMIGNKHERIKLLESQLVEGE--GKPGEVIN--PNF--TIACSQGA 278
E E KL + E E G GEV+ + G
Sbjct: 241 QSLKVMATIPVGTEYWSELPPELQKLEKVWSSESEVVGNIGEVVKVIKGLGPVVQTGSGW 300
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCI 308
+ + ++Q AG +V+ DF G +++G +
Sbjct: 301 LLLWQVQLAGKKVVSGWDFANGTRLLVGEV 330
>gi|15604082|ref|NP_220597.1| methionyl-tRNA formyltransferase [Rickettsia prowazekii str. Madrid
E]
gi|6226613|sp|P50932|FMT_RICPR RecName: Full=Methionyl-tRNA formyltransferase
gi|3860773|emb|CAA14674.1| METHIONYL-TRNA FORMYLTRANSFERASE (fmt) [Rickettsia prowazekii]
gi|292571806|gb|ADE29721.1| Methionyl-tRNA formyltransferase [Rickettsia prowazekii Rp22]
Length = 303
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 109/310 (35%), Positives = 170/310 (54%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMGT EFAV TL+ L+ H + +V+TQ P+ G RGL S +H+ A E +P
Sbjct: 1 MKVIFMGTPEFAVPTLKKLI-IHHEVKAVFTQQPKAKG-RGLHLAKSPIHQLAFEHQIPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P+ E +AD+ VV+AYG ++P+ IL A K G N H S LPR RGAAP
Sbjct: 59 YSPSTLRNDETINLIKKIDADIIVVIAYGFIVPKAILEAKKYGCLNIHPSDLPRHRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QR I+ GD ++ + IM+MD LDTG + + + I L + + L A +++
Sbjct: 119 LQRTIIEGDRKSSVCIMRMDSGLDTGDILLKEDLNLERRITLDELSNKCAHLGAELLIKT 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ Q NGITYA K++K E ++N+ SA ++ IR ++P+PGA+
Sbjct: 179 LANIDNI--VPIKQSSNGITYAHKLTKAEGKINWYESAYSIDCKIRGMNPWPGAYFSY-- 234
Query: 242 GNKHERIKLLESQLVEGEGK--PGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ IK+L ++ PG VIN IAC G +R+ +LQ+ + L+I +FL
Sbjct: 235 --NDKIIKILRAEYFNYNHHFIPGTVINNKLEIACGSGILRVKKLQQESKKALNIEEFLR 292
Query: 300 GCPVIIGCIV 309
G ++ I+
Sbjct: 293 GTNILKDTIL 302
>gi|114561211|ref|YP_748724.1| methionyl-tRNA formyltransferase [Shewanella frigidimarina NCIMB
400]
gi|122301206|sp|Q08A29|FMT_SHEFN RecName: Full=Methionyl-tRNA formyltransferase
gi|114332504|gb|ABI69886.1| methionyl-tRNA formyltransferase [Shewanella frigidimarina NCIMB
400]
Length = 318
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 114/302 (37%), Positives = 170/302 (56%), Gaps = 7/302 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+++F GT +FA LQAL+ S H +++ YTQP RPAG RG K S V A E ++P
Sbjct: 3 PLKIIFAGTPDFAARHLQALIDSEHDVIATYTQPDRPAG-RGKKLTASPVKALALEHAIP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E + + NAD+ +VVAYGL++P+ +L+ +LG N H S+LPRWRGAA
Sbjct: 62 VFQPASLRNEEAQAELAALNADIMIVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ IM+MD LDTG + +PI + +A L ++L+ A+V+
Sbjct: 122 PIQRALWAGDTETGVTIMQMDIGLDTGDMLLKTHLPIEATDTSASLYEKLAEQGPKALVQ 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L +L Q E YAEK+SK E R+++ +SA+ + IRA +P+P ++ E
Sbjct: 182 ALIGLSDGSLKAQKQDETLANYAEKLSKEEARLDWNKSAKQLWQDIRAFNPWPVSYFEHQ 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++L PG +I IA ++G + I +Q + LD+ D
Sbjct: 242 QSVIKVWQADYSAELC--SQAPGTIIAATKQGIEIATAEGKLMIKTMQLPNKKPLDVADI 299
Query: 298 LL 299
L
Sbjct: 300 LN 301
>gi|126658839|ref|ZP_01729983.1| methionyl-tRNA formyltransferase [Cyanothece sp. CCY0110]
gi|126619937|gb|EAZ90662.1| methionyl-tRNA formyltransferase [Cyanothece sp. CCY0110]
Length = 331
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 107/333 (32%), Positives = 171/333 (51%), Gaps = 27/333 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++V+F GT +FAV TLQ L++ +++ V TQP + G RG K + SAV K A + ++
Sbjct: 1 MQVIFFGTPQFAVPTLQKLLNHPQFNVIGVVTQPDKRRG-RGKKIIPSAVKKVALDHNIT 59
Query: 62 ALVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ +++ Q + ADV VVVAYG ++ IL KLG N H S+LP++RGA
Sbjct: 60 VWQPKRIKKDQDTLIQLRNSEADVFVVVAYGQILSSEILQMPKLGCVNVHGSILPQYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ + GD +TGI M MD+ +DTG + I+ N + ++L+ A ++
Sbjct: 120 APIQWCLYNGDRKTGITTMLMDEGMDTGDMLLKAYTDINLFDNAHEIAEKLANQGADLLI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG----- 234
E ++KL+ N + PQ ++ TYA I+K + +++ +SA +HN IR P
Sbjct: 180 ETLEKLDNNQMKPIPQNDDEATYASLINKDDFIIDWNKSAIAIHNQIRGFYPNCFTSFRD 239
Query: 235 -------------AWLEMMIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQG 277
+L+ + N K +ES L + G PGEVI I +G
Sbjct: 240 NKLKITATIPINDNYLQALDDNFDGLKKHIES-LDKMTGNPGEVISLIKKFGPVIQTGEG 298
Query: 278 AVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ + +Q +G R D + G + +G I+G
Sbjct: 299 LLLLSNVQPSGKRPQSGWDLVNGSHLKVGEILG 331
>gi|330752076|emb|CBL80586.1| methionyl-tRNA formyltransferase [uncultured Leeuwenhoekiella sp.]
Length = 319
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 103/311 (33%), Positives = 163/311 (52%), Gaps = 11/311 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M+ LR+VFMGT +FAVA LQ LV + ++IV V T P RPAG RG K SAV AQ +
Sbjct: 1 MSDLRIVFMGTPDFAVAGLQKLVENKYNIVGVITAPDRPAG-RGQKLQQSAVKNYAQSQN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L L PT L + + L +V ++P+ + +LG +N HASLLP +RGA
Sbjct: 60 LKVLQPTNLKDASFIEELKSLNANLQIVVAFRMLPEVVWKMPELGTFNLHASLLPDYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G+ ETG++ +D+ +DTG + +K+ IS N L L ++ ++
Sbjct: 120 APINWAIIKGETETGVSTFFIDEKIDTGAIILQKKLSISPEENAGSLHDRLMHTGSNLIL 179
Query: 180 EAMDKLEQNNLPLSPQI-ENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
E + +E+ + Q + I A K+ + TR+++ R E +HN IR LSP+P A+
Sbjct: 180 ETVKLIEKGPVETRIQPKQEQIHTAYKLDRTNTRIDWNRPIEEIHNLIRGLSPYPVAYTH 239
Query: 239 MMIGNKHERI-KLLESQLV-----EGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGR 290
+ + E K+ + + G G++I +A G + ++ +Q +G +
Sbjct: 240 FVNEDDKEHQLKVYAASKASNIDLDSNGTIGKIITKENKLFVAGIDGWIELLEIQLSGKK 299
Query: 291 VLDIGDFLLGC 301
+ + D L G
Sbjct: 300 KMQVKDLLNGF 310
>gi|154492888|ref|ZP_02032514.1| hypothetical protein PARMER_02527 [Parabacteroides merdae ATCC
43184]
gi|154087193|gb|EDN86238.1| hypothetical protein PARMER_02527 [Parabacteroides merdae ATCC
43184]
Length = 324
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 101/321 (31%), Positives = 159/321 (49%), Gaps = 15/321 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV +L+ALV ++IV V T P +P GR G S V + A
Sbjct: 1 MKKEDLRIVYMGTPDFAVESLRALVEGGYNIVGVITMPDKPVGRHGSVLQASPVKQYALS 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P KL E + L +V ++P+ + + +LG +N HASLLP++R
Sbjct: 61 KGLPVLQPEKLKDEAFLSELRALKADLQIVVAFRMLPEVVWDMPRLGTFNLHASLLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETG + +DTG + + +PI+ + + L + A
Sbjct: 121 GAAPINWAVINGDTETGATTFFLTHEIDTGKIIRQKHLPIADTDDVGIVHDGLMTMGAGL 180
Query: 178 MVEAMDKLEQNNLPLSPQ-----IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
++E +D L + PQ + + A KI K R+++ + + V++ IR LSP+
Sbjct: 181 VLETVDLLLEGKTDAVPQEEFYKDPSELRPAPKIFKETCRIDWLQPVKRVYDFIRGLSPY 240
Query: 233 PGAWLEMMIGNKHERI-KLLESQ--LVEGEGKPGEVINPN---FTIACSQGAVRIMRLQR 286
P AW E++ K+ +++ E G + IA G +R++ +Q
Sbjct: 241 PAAWTEIVSPEGVRTALKIYQAEKRPAAHELPVGTIRTDRKSYIDIAVEDGYLRLLSVQL 300
Query: 287 AGGRVLDIGDFLLGCPVIIGC 307
AG + L + DFL G IG
Sbjct: 301 AGKKRLPVTDFLNGFK-QIGE 320
>gi|262089742|gb|ACY24836.1| Fmt methionyl-tRNA formyltransferase [uncultured organism]
Length = 328
Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats.
Identities = 109/316 (34%), Positives = 168/316 (53%), Gaps = 9/316 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT EFA L+AL+ S H +++VY+QP RPAG RG K S V + A +P
Sbjct: 5 PLNIIFAGTPEFAAEHLKALIGSRHKVIAVYSQPDRPAG-RGKKLTASPVKEVALAHDIP 63
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E + L+ D+ VVVAYGL++P+ +L+ +LG N HAS+LPRWRGAA
Sbjct: 64 VYQPLNFKSDEAKAELAALNADLMVVVAYGLILPKAVLDTPRLGCINVHASILPRWRGAA 123
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD+ETG+ IM+MD LDTG + PI + L L + A A+++
Sbjct: 124 PIQRAIEAGDSETGVTIMQMDVGLDTGNMLIKAFCPILATDTGGILHDRLLTIGAPALLQ 183
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+++++ Q ++ YA K+ K E +N+ A + +RA +PFP A +
Sbjct: 184 ALEQIQSGQTTPIKQDDSLSNYAPKLHKEEAALNWQLPAIELERKVRAFNPFPVAHTKPA 243
Query: 241 IGNKHERIKLLESQLVEGE-----GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
RI++ + E G ++ + +AC G + I +Q + L++
Sbjct: 244 GAGDDARIRVWAAIATEKASNAPLGSITQIDSRGIWVACKHGQLIIENIQLPSKKALNVV 303
Query: 296 DFLLGCP--VIIGCIV 309
+ L G P +G +
Sbjct: 304 EILRGHPDLFKVGELF 319
>gi|282866195|ref|ZP_06275242.1| methionyl-tRNA formyltransferase [Streptomyces sp. ACTE]
gi|282558979|gb|EFB64534.1| methionyl-tRNA formyltransferase [Streptomyces sp. ACTE]
Length = 310
Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats.
Identities = 102/314 (32%), Positives = 160/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MKLVFAGTPEVAVPALDALIASERHEVAAVVTRPDAPAG-RGRRLVASPVAERAEEAGIE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + E++ + D VVAYG ++P+ L G+ N H SLLP WRGAA
Sbjct: 60 ILKPARPRDEDFLARLREIAPDCCPVVAYGALLPKSALEVPARGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q ++MAGD TG + +++ LD+GPV + + + L L+ A +
Sbjct: 120 PVQHSVMAGDEVTGASTFLIEEGLDSGPVYGVLTEEVRPTDTSGDLLTRLAFAGAGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ GIT A KI+ + +V + A V +R +P PGAW
Sbjct: 180 TMDGIEDGTLHAVPQPAEGITLAPKITVEDAQVRWAEPALRVDRVVRGCTPAPGAWTLF- 238
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+KL+++ V + PGE+ N + AV ++ +Q G + + D
Sbjct: 239 ---RGERLKLVQAVPVPDRTDLAPGELSAGKNNVYVGTGSYAVELLWVQPQGKKPMRAAD 295
Query: 297 FLLGCPVIIGCIVG 310
+ G + G ++G
Sbjct: 296 WARGVRIAHGELLG 309
>gi|91791392|ref|YP_561043.1| methionyl-tRNA formyltransferase [Shewanella denitrificans OS217]
gi|123061400|sp|Q12TA6|FMT_SHEDO RecName: Full=Methionyl-tRNA formyltransferase
gi|91713394|gb|ABE53320.1| methionyl-tRNA formyltransferase [Shewanella denitrificans OS217]
Length = 319
Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 114/304 (37%), Positives = 172/304 (56%), Gaps = 11/304 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT +FA LQAL+ S H++++VY+QP RPAG RG K S V + A +P
Sbjct: 3 PLNIIFAGTPDFAARHLQALLDSEHNVIAVYSQPDRPAG-RGKKLSASPVKELALSHDIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E + L+ D+ VVVAYGL++PQ +L+ +LG N H S+LPRWRGAA
Sbjct: 62 VFQPASLRAVEAQAELATLNADIMVVVAYGLILPQIVLDTPRLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD ETG+ IM+MD LDTG + +PI +A L ++L+V A++E
Sbjct: 122 PIQRALWAGDTETGVTIMQMDLGLDTGDMLLKTSLPIEDADTSASLYEKLAVQGPQALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+D L L PQ YAEK+SK E R+++ +SA+ + IRA +P+P ++ E
Sbjct: 182 ALDGLNAGKLKGEPQDPALANYAEKLSKEEARLDWNKSAKQLWQEIRAFNPWPVSYFEYQ 241
Query: 241 IGNKHERIKLLESQ--LVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIG 295
IK+ ++ G +I + +A ++G++++ +Q + L +
Sbjct: 242 DS----TIKVWQASYNPQPNSALAGSIIKADKHSIEVATAEGSLQLEIIQLPNKKPLAVA 297
Query: 296 DFLL 299
D L
Sbjct: 298 DILN 301
>gi|42524170|ref|NP_969550.1| hypothetical protein Bd2757 [Bdellovibrio bacteriovorus HD100]
gi|73919380|sp|Q6MJL7|FMT_BDEBA RecName: Full=Methionyl-tRNA formyltransferase
gi|39576378|emb|CAE80543.1| fmt [Bdellovibrio bacteriovorus HD100]
Length = 318
Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 112/322 (34%), Positives = 175/322 (54%), Gaps = 17/322 (5%)
Query: 1 MTL-RVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M+ RV F+GT EFAV +L+AL+ +V V TQP RPAG R L+ S V AQ
Sbjct: 1 MSKVRVCFLGTPEFAVTSLKALLSDEHFEVVGVVTQPDRPAG-RKLQLTPSPVKALAQAH 59
Query: 59 SLPALVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+L L P K ++ ++ A+VAVVVA+G ++ Q L++ + G N H S+LPRW
Sbjct: 60 NLKVLAPESLKANPLMLQEIKTWGAEVAVVVAFGQILTQEFLDSFRFGCVNVHGSVLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI AGD E+G+ + KM K LD G + +R+V I+ ++N L L+ L A
Sbjct: 120 RGAAPIQRAIEAGDVESGVTLQKMVKKLDAGDIIGIRRVKITPDMNALQLHDVLAQLGAE 179
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+ + + NL +PQ E+ +T A+KI K E+++++ SA+ + IR PG +
Sbjct: 180 LLQVELMDYVRGNLAPTPQDESKVTLAKKIEKMESQIDWSTSAKAIDGKIRGFVYGPGTY 239
Query: 237 LEMMIGNKHERIKLLESQLVE-----GEGKPGEV---INPNFTIACSQGAVRIMRLQRAG 288
+ +++KL + + G KPG + + ++A G +++ +Q
Sbjct: 240 TFLQG----KKLKLHRATVTRDGGSIGSAKPGTITAVHEDHISVATGDGVLQLFEVQPES 295
Query: 289 GRVLDIGDFLLGCPVIIGCIVG 310
+ I DFL G + +G +G
Sbjct: 296 RNRMAIADFLKGHALKVGDQLG 317
>gi|313206122|ref|YP_004045299.1| methionyl-tRNA formyltransferase [Riemerella anatipestifer DSM
15868]
gi|312445438|gb|ADQ81793.1| methionyl-tRNA formyltransferase [Riemerella anatipestifer DSM
15868]
gi|315022929|gb|EFT35952.1| Methionyl-tRNA formyltransferase [Riemerella anatipestifer RA-YM]
gi|325336433|gb|ADZ12707.1| Methionyl-tRNA formyltransferase [Riemerella anatipestifer RA-GD]
Length = 317
Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 95/306 (31%), Positives = 155/306 (50%), Gaps = 6/306 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+VVF GT +FA +L+A+ S H +V V T + +G RG K S V + A E LP
Sbjct: 4 PLKVVFFGTPDFAKHSLEAIHHSQHQVVGVVTVADKASG-RGQKITASPVKEYALEQGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL ++ + + VV ++P+ + +LG +N HASLLP +RGAAP
Sbjct: 63 IYQPEKLRNPDFLEAMKQLEADVFVVVAFRMMPKVLFEIPRLGTFNLHASLLPDYRGAAP 122
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ TG+ +++ +D G + +++ I+ + + L L + +VE
Sbjct: 123 INFAIINGETTTGVTTFFINEKIDEGNILLQKELSIAPDEDAGSLHDRLMTIGGELIVET 182
Query: 182 MDKLEQNNLPLSPQIE-NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D L N++ PQ A KI K +T++N+ + N+HN +R LSP+P A+ +
Sbjct: 183 LDGLSANSITEQPQPIVAEPKNAFKIFKEDTKINWNDTGVNLHNFVRGLSPYPTAFTNIK 242
Query: 241 IGNKHERIKLLES--QLVEGEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
IG + + +K+ + Q E + G E+ +F I G LQ G + + + D
Sbjct: 243 IGEEEKSLKIYKGYFQPSEHSHQAGEIEITKNSFKIYTKDGIYFPEELQLQGKKRMPVKD 302
Query: 297 FLLGCP 302
FL G
Sbjct: 303 FLNGFR 308
>gi|300773586|ref|ZP_07083455.1| methionyl-tRNA formyltransferase [Sphingobacterium spiritivorum
ATCC 33861]
gi|300759757|gb|EFK56584.1| methionyl-tRNA formyltransferase [Sphingobacterium spiritivorum
ATCC 33861]
Length = 325
Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 96/311 (30%), Positives = 160/311 (51%), Gaps = 14/311 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT +FAVA+L+AL+ S ++V+V T P +PAG RG K SAV K A E +P
Sbjct: 18 MRIIFMGTPDFAVASLKALLDSGENVVAVVTVPDKPAG-RGQKLHESAVKKFAVEHQIPV 76
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P +L E+ + L VV ++P+ + + G N H SLLP++RGAAPI
Sbjct: 77 LQPVRLKDPEFLKELKAFNADLQVVVAFRMLPELVWDMPAKGTINVHGSLLPQYRGAAPI 136
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ +TG+ + +DTG + F +VPI+ N N + +L A +++ +
Sbjct: 137 NHAIINGEEKTGVTTFLLQHEIDTGNILFKGEVPITENDNAGTIHDKLMHKGAEVLLQTI 196
Query: 183 DKLEQNNLPLSPQIE----NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ ++L PQ + +A KI K + +N+ +S V N IR LSP+P A+
Sbjct: 197 KAMKADSLTPVPQDTLIEGTTLKHAPKIFKEDCLINWDKSTATVFNLIRGLSPYPAAFTY 256
Query: 239 MMIGNKHERIKLLES--QLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLD 293
+ + +K+ E ++ + + + G + A G + + LQ G + +
Sbjct: 257 L----DGKVLKIYEVQKEIAKPDIQAGRYVTDGKTYLKYATQDGYIHLKALQIEGKKRML 312
Query: 294 IGDFLLGCPVI 304
+FL G
Sbjct: 313 TDEFLRGYRFA 323
>gi|221135271|ref|ZP_03561574.1| methionyl-tRNA formyltransferase [Glaciecola sp. HTCC2999]
Length = 329
Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 120/306 (39%), Positives = 174/306 (56%), Gaps = 11/306 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+L +VF GT EFA L AL+++ H+IV VYTQP RPAG RG K SAV A E +LP
Sbjct: 4 SLNIVFAGTPEFAADHLAALLNTDHNIVGVYTQPDRPAG-RGKKLTPSAVKCLAIEHNLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E + L+ D+ VVVAYGL++PQ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPASFRDESTQSELAALNADLMVVVAYGLLLPQIVLDTPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ AGD+ TG+ IM+MD LDTG + + +PI ++ +A L Q+L+ A+V
Sbjct: 123 PIQRALWAGDSVTGVTIMQMDIGLDTGAMLYKTNLPILASDTSASLYQKLAKQGPEALVH 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + Q ++ YA+K+SK E +N+ AE + ++RA +P+P A+ +
Sbjct: 183 VLS--DFSAFTPEAQNDDAANYAKKLSKDEAHINWYVPAEQLERNVRAFNPWPMAFFTVE 240
Query: 241 I-GNKHERIKLLESQL---VEGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGRVLD 293
K + +K+ + + + PG +I IA SQGA+ I + Q G + L
Sbjct: 241 DEQGKQQNVKVWTAHVDTTLSSAHSPGTIIKADKTGLYIATSQGALVITQCQIPGKKALP 300
Query: 294 IGDFLL 299
I D L
Sbjct: 301 ISDILN 306
>gi|320011938|gb|ADW06788.1| methionyl-tRNA formyltransferase [Streptomyces flavogriseus ATCC
33331]
Length = 310
Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 102/314 (32%), Positives = 161/314 (51%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MKLVFAGTPEVAVPALDALIASGRHEVAAVVTRPDAPAG-RGRRLVASPVAERAEEAGIE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K EE+ + + VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 60 VLKPAKPRDEEFLARLREIAPECCPVVAYGALLPKVALDIPARGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q ++MAGD TG + +++ LD+GPV + + + L L+ A +
Sbjct: 120 PVQHSVMAGDEVTGASTFLIEEGLDSGPVYGVLTEEVRPTDTSGDLLTRLAFAGAGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ G+T A KI+ + +V + A V +R +P PGAW
Sbjct: 180 TMDGIEDGTLHAVPQPAEGVTLAPKITVEDAQVQWSAPALRVDRVVRGCTPAPGAWTLF- 238
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+KL+++ V + PGE+ N + AV ++ +Q G + + D
Sbjct: 239 ---RGERLKLVQAAPVLDRTDLAPGELSAGKNNVYVGTGSHAVELLWVQPQGKKPMRAAD 295
Query: 297 FLLGCPVIIGCIVG 310
+ G + G ++G
Sbjct: 296 WARGVRIAHGELLG 309
>gi|119483419|ref|ZP_01618833.1| methionyl-tRNA formyltransferase [Lyngbya sp. PCC 8106]
gi|119458186|gb|EAW39308.1| methionyl-tRNA formyltransferase [Lyngbya sp. PCC 8106]
Length = 327
Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 96/327 (29%), Positives = 155/327 (47%), Gaps = 21/327 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++F GT FAV +L+ L+ +++V TQP + G RG K S V A E +P
Sbjct: 1 MKIIFFGTPLFAVPSLEKLLHHPEFEVLAVVTQPDKRRG-RGSKLTPSPVKSLAVEHQIP 59
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ + + AD VVVAYG ++ IL +LG NGH S+LP +RGA
Sbjct: 60 VWQPKRIKKHPETLSRLKQAQADAFVVVAYGQILSPEILQMPRLGCINGHGSILPEYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ + G+ TGI M MD +DTGP+ + PI + L + LS + A +V
Sbjct: 120 APIQWCLYNGEKSTGITTMLMDAGMDTGPMLLKQSTPIGLFDHAINLAERLSSITADLLV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE- 238
E + K + + +PQ ++ TYA I + R+++ +SA +HN +R P
Sbjct: 180 ETLIKFNRGEIQPTPQDDSQATYASLIKPEDYRLDWSKSALALHNQVRGFFPNCVTSFRE 239
Query: 239 ------------MMIGNKHERIKLLESQLVEGEGKPGEVINP----NFTIACSQGAVRIM 282
+ + ++ + ++ L GKPGE+++ I G + +
Sbjct: 240 QALKISGTIPLGIKLPSELQELEQQWPTLSPLSGKPGEILHIVKRFGPVIQTGDGLLLLQ 299
Query: 283 RLQRAGGRVLDIGDFLLGCPVIIGCIV 309
++ AG R DF G + G I+
Sbjct: 300 DVKLAGKRTQSGWDFANGTRLASGEIL 326
>gi|326780518|ref|ZP_08239783.1| methionyl-tRNA formyltransferase [Streptomyces cf. griseus
XylebKG-1]
gi|326660851|gb|EGE45697.1| methionyl-tRNA formyltransferase [Streptomyces cf. griseus
XylebKG-1]
Length = 310
Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 104/314 (33%), Positives = 161/314 (51%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MKLVFAGTPEVAVPALDALIASDRHEVAAVVTRPDAPAG-RGRRLVASPVAERAEEAGIE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K EE+ + D VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 60 VLKPAKPRDEEFLARLREIAPDCCPVVAYGALLPKVALDVPARGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A+MAGD TG + +++ LD+GPV + + + L L+ A +
Sbjct: 120 PVQHAVMAGDEVTGASTFLIEEGLDSGPVYGVLTEEVRPTDTSGDLLTRLAFAGAGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ G+T A KI+ + +V + A V +R +P PGAW
Sbjct: 180 TMDGIEDGTLHAVPQPHEGVTLAPKITVEDAQVQWSAPALRVDRVVRGCTPAPGAWTVF- 238
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+KL+++ V + PGE+ N + AV ++ +Q G + + D
Sbjct: 239 ---RGERLKLIQATPVLDRTDLAPGELSAAKNNVYVGTGSHAVELLWVQPQGKKPMRGAD 295
Query: 297 FLLGCPVIIGCIVG 310
+ G + G ++G
Sbjct: 296 WARGVRIAHGELLG 309
>gi|302550114|ref|ZP_07302456.1| methionyl-tRNA formyltransferase [Streptomyces viridochromogenes
DSM 40736]
gi|302467732|gb|EFL30825.1| methionyl-tRNA formyltransferase [Streptomyces viridochromogenes
DSM 40736]
Length = 310
Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 101/314 (32%), Positives = 159/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MKLVFAGTPEVAVPALDALLASRRHEVAAVVTRPDAPAG-RGRRLVASPVAERAEEAGIE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + E+ E+ D VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 60 VLKPARPKDPEFLERLREIGPDCCPVVAYGALLPRVALDVPAHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AIMAGD TG + +++ LD+GPV I + + L L+ A +
Sbjct: 120 PVQHAIMAGDEITGASTFLIEEGLDSGPVYGTVTEEIRATDTSGDLLTRLAFAGAGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ +G+T A K++ + +++ A V +R +P PGAW
Sbjct: 180 TMDGIEDGTLKAVPQPADGVTLAPKVNVEDAHLDWNAPALRVDRVVRGCTPAPGAWTLF- 238
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+KL++ V + PG++ N + V ++ +Q G + + D
Sbjct: 239 ---RGERLKLVQVAPVPDRTDLAPGQISARKNNVYVGTGSYGVELLWVQAQGKKPMRAAD 295
Query: 297 FLLGCPVIIGCIVG 310
+ G + G +G
Sbjct: 296 WARGVRIAEGERLG 309
>gi|295397806|ref|ZP_06807871.1| methionyl-tRNA formyltransferase [Aerococcus viridans ATCC 11563]
gi|294973941|gb|EFG49703.1| methionyl-tRNA formyltransferase [Aerococcus viridans ATCC 11563]
Length = 327
Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats.
Identities = 104/323 (32%), Positives = 167/323 (51%), Gaps = 20/323 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALV--SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M R+VFMGT F+V L ALV + +V+V TQP RP G R K S V + A +
Sbjct: 1 MK-RIVFMGTPAFSVNILDALVAQDDQYEVVAVVTQPDRPVG-RKRKLTPSPVKEAALKH 58
Query: 59 SLPALVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+P P K+G+++ + L + + D+ V A+G +P IL A K G N HASLLP++R
Sbjct: 59 DIPVYQPEKIGRDQEIKDLLAEDIDLIVTAAFGQFLPTSILEAPKYGAVNVHASLLPKYR 118
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
G AP+ AI GD ETG+ IM+M K +D G + VPI S+ A + +LSV
Sbjct: 119 GGAPVHYAIWNGDKETGVTIMRMVKKMDAGDILTQVVVPIESDDTVATMFDKLSVAGTDL 178
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
++E + KL + Q+E T++ I+ + ++++ + A+ + N +RA + +P A
Sbjct: 179 LIETLPKLFAGEIEPQAQVEEEATFSPNITSQQEQIDWRKEAQQIDNQVRAFNAWPVAHT 238
Query: 238 EMMIGNKHERIKLLESQLVEGEG---KPGEVIN-----PNFTIACSQG-AVRIMRLQRAG 288
++ +R K+ + V+ E KPG +I +A + I +LQ AG
Sbjct: 239 KV----DGQRWKIWQVAPVKEESTDEKPGTIIKIQKKPAQLWVATGNKTVLAIEQLQPAG 294
Query: 289 GRVLDIGDFLLG--CPVIIGCIV 309
+ +D+ F+ G + +G
Sbjct: 295 KKKMDVAAFINGGAGNLAVGDSF 317
>gi|258515527|ref|YP_003191749.1| methionyl-tRNA formyltransferase [Desulfotomaculum acetoxidans DSM
771]
gi|257779232|gb|ACV63126.1| methionyl-tRNA formyltransferase [Desulfotomaculum acetoxidans DSM
771]
Length = 312
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 96/312 (30%), Positives = 150/312 (48%), Gaps = 5/312 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ VFMG+ +FAV +L+ L I V TQP RP G RG K + + V AQ L
Sbjct: 1 MKTVFMGSPDFAVPSLEKLYKMGFDIAGVVTQPDRPKG-RGKKLLPTPVKIFAQSAGLKI 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYG-LVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ E+ + L + +VV ++ +L + G N HASLLP++RGAAP
Sbjct: 60 FQPEKIKTPEFIRLLRNLSPQVIVVVAFGQLLSPELLQIPQFGCINVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RA++ G+ TG+ M MD+ LDTG + +++P+ + L+VL A +
Sbjct: 120 IHRAVINGEKVTGVTTMYMDEGLDTGDMILSQELPVEKQDTVGMVHDRLAVLGAEVLERT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ P Q ++ TYA ++K + +N+ SA + NHIR ++P+PG +
Sbjct: 180 LQLVDDGEAPRQKQQDSSATYAPLLTKADEIINWHSSAREICNHIRGMNPWPGTCTYLDG 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+LV+ G PG+V I Q V I LQ + + DFL
Sbjct: 240 QVIKIWQATYGKRLVDAIGLPGQVMASDAGGIIIQAGQDQVCIKELQLQCCKRMMTADFL 299
Query: 299 LGCPVIIGCIVG 310
G + G +G
Sbjct: 300 RGKQIPEGRCLG 311
>gi|291288642|ref|YP_003505458.1| methionyl-tRNA formyltransferase [Denitrovibrio acetiphilus DSM
12809]
gi|290885802|gb|ADD69502.1| methionyl-tRNA formyltransferase [Denitrovibrio acetiphilus DSM
12809]
Length = 307
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 100/314 (31%), Positives = 156/314 (49%), Gaps = 15/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMGT E AV TL+ LV + + V TQ +P G RG + V + A E L
Sbjct: 1 MKVVFMGTPEMAVPTLRELVDNDIDVALVITQTDKPKG-RGKQMQAPPVKEFALEQGLDV 59
Query: 63 LVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P K E EQ S D VV AYG ++PQ +L+ K N H SLLP++RGAA
Sbjct: 60 IQPISLKNNDEVLEQLKSIAPDFLVVAAYGKILPQAVLDVPKYAPVNVHFSLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ A++ G+ ETG+A M MD LDTG + + K PI ++ +
Sbjct: 120 PVNWAVINGEKETGVATMLMDAGLDTGDILQVLKTPIEKKTAVDIAEELSETGARLLIKT 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
E N+ Q+E +TYA + K + +++ +SAE + IR P+P A+ +
Sbjct: 180 LN---EFENIKPVKQVEEDMTYAPMMKKDDGHIDWSKSAEKIECMIRGFVPWPTAYSRL- 235
Query: 241 IGNKHERIKLLESQLVEGE--GKPGE---VINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +KL +++V+ + G V +F+I C +G ++++ LQ G + + +G
Sbjct: 236 ---NGKTVKLFSAEVVKANEELEAGTVYDVTKKSFSIKCGEGGLKVVELQPEGKKRMPVG 292
Query: 296 DFLLGCPVIIGCIV 309
FL G + G
Sbjct: 293 SFLAGAQLKGGEKF 306
>gi|256425437|ref|YP_003126090.1| methionyl-tRNA formyltransferase [Chitinophaga pinensis DSM 2588]
gi|256040345|gb|ACU63889.1| methionyl-tRNA formyltransferase [Chitinophaga pinensis DSM 2588]
Length = 315
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 13/309 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT +FAVA+L LV + +++V+V T P +PAG RGL+ SAV + A ++P
Sbjct: 11 MRIIFMGTPDFAVASLDILVQNGYNVVAVITAPDKPAG-RGLQLQQSAVKQYAVSRNIPV 69
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL ++ L VV ++P+ + + LG N HASLLP +RGAAPI
Sbjct: 70 LQPEKLKNPDFLTELRALKADLQVVVAFRMLPEVVWDMPPLGTINVHASLLPNYRGAAPI 129
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ E+G+ K+ +DTG + F + V I + L +L A +++ +
Sbjct: 130 NWAIINGEKESGVTTFKLQHEIDTGDILFSQSVVIRDDETAGELHDDLMATGAGLLLKTV 189
Query: 183 DKLEQNNLPLSPQ---IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
L +PQ I +A KI K + ++ + + E ++N +R +SP+P AW +
Sbjct: 190 QALGSGTAAGTPQAHIKAEEIKHAPKIFKEDCQIKWEQPVEQIYNLVRGMSPYPTAWTML 249
Query: 240 MIGNKHERIKLLES--QLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDI 294
+ +K+ ++ + + PGE I+ N IA G + + +Q G + +DI
Sbjct: 250 AG----KSVKIFKATREHAQPSVAPGEAISDNKTYLKIAAPDGYLSLQEIQMEGKKRMDI 305
Query: 295 GDFLLGCPV 303
FL G V
Sbjct: 306 EAFLRGNKV 314
>gi|304415448|ref|ZP_07396097.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Candidatus Regiella insecticola
LSR1]
gi|304282712|gb|EFL91226.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Candidatus Regiella insecticola
LSR1]
Length = 319
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 116/320 (36%), Positives = 170/320 (53%), Gaps = 17/320 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L L+ S H +V V TQP RPAG RG S V AQ+ +P
Sbjct: 4 SLRIIFAGTPDFAAYHLNRLLFSQHQVVGVLTQPDRPAG-RGNNFTASPVKILAQQHEIP 62
Query: 62 ALVP-----TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P + + AD+ VVVAYGL++P +LN +LG N H SLLPRW
Sbjct: 63 VYQPVSLRSEENQHIVMDLVTDKQADIMVVVAYGLILPATVLNMPRLGCINVHGSLLPRW 122
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRA+ AGD E+GI+IM+MD LDTG V I + + L ELSV+ +
Sbjct: 123 RGAAPIQRALWAGDQESGISIMQMDVGLDTGDVLHKSVYAIQPDDTSVTLYNELSVIGSE 182
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
A++ + + N + Q E TYAEK++K E ++++ SA + IRA +P+P ++
Sbjct: 183 ALLLTLQQFVDNKVRAEIQDEQQATYAEKLTKKEAKLDWSLSALQLERCIRAFNPWPVSY 242
Query: 237 LEMMIGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRV 291
+ IK+ ++Q++ KPG +I +A ++G + I +LQ AG +
Sbjct: 243 FIVDQHL----IKVWQAQVLTSTDNVKPGTIIQADKKGIQVATAEGVLNITKLQIAGKKA 298
Query: 292 LDIGDFLLGCP--VIIGCIV 309
+ D L IG +
Sbjct: 299 MSAADVLNARREWFAIGRKL 318
>gi|294673009|ref|YP_003573625.1| methionyl-tRNA formyltransferase [Prevotella ruminicola 23]
gi|294474124|gb|ADE83513.1| methionyl-tRNA formyltransferase [Prevotella ruminicola 23]
Length = 324
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 99/311 (31%), Positives = 164/311 (52%), Gaps = 11/311 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT EFAV TLQALV + +++V+V TQP +P GR + S V K A + +LP
Sbjct: 6 LRIVFMGTPEFAVPTLQALVENDYNVVAVVTQPDKPVGRHQTEMQPSEVKKYALDHNLPV 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P K+ E+ + L VV ++P+ + + G +N HA+LLP++RGAAPI
Sbjct: 66 LQPVKMKDPEFVEQLRSYQANLQVVVAFRMLPEVVWDMPAYGTFNVHAALLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ +TG+ +D +DTG + + I + + L L A +E +
Sbjct: 126 NWAVIHGETQTGVTTFFLDHDIDTGRIIMQKPFAIPDTADVEYVYDGLMNLGAEICLETL 185
Query: 183 DKLE--QNNLPLSPQIE-----NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
+K+ + PQ + + + A KI K ++N+ + A+ V++ IR LSP+PGA
Sbjct: 186 EKIIAADGHPESIPQEQMIPVGSELHAAPKIFKETCQINWNQPAKQVYDFIRGLSPYPGA 245
Query: 236 WLEMMIGNKHERI-KLLES-QLVEGEGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRV 291
W ++ + E + K+ ++ + G+ G +I+ I + + I LQ AG +
Sbjct: 246 WTTLVSPDGKETVLKIFKTNKTGNTTGELGHTAIIDRKPCIKAADELLMIEELQLAGKKR 305
Query: 292 LDIGDFLLGCP 302
++ DFL G
Sbjct: 306 MNGKDFLNGIK 316
>gi|254515963|ref|ZP_05128023.1| methionyl-tRNA formyltransferase [gamma proteobacterium NOR5-3]
gi|219675685|gb|EED32051.1| methionyl-tRNA formyltransferase [gamma proteobacterium NOR5-3]
Length = 319
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 112/319 (35%), Positives = 166/319 (52%), Gaps = 14/319 (4%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M LR+ F GT +FA L L++SSH +V+V TQP RPAG RG K S V A+
Sbjct: 1 MPALRLAFAGTPDFAAVHLAGLINSSHELVAVLTQPDRPAG-RGKKDRPSPVKVLAENHQ 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P + D +VVAYGL++PQ +L+ + G N H SLLPRWRG
Sbjct: 60 IPVLQPQSLRNPQALAAIAELQLDALIVVAYGLILPQNVLDLPRYGCLNVHGSLLPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQRA+ AGD E+G+ IM MD LDTGP+ I++ ++ L +L+ + +
Sbjct: 120 AAPIQRAVEAGDKESGVTIMLMDAGLDTGPMLAHGPCAITAQTSSGDLYGQLATIGPGLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ ++ L + Q + +YA KISK E +++ A + IRA +P PG +
Sbjct: 180 LQVLEDLPARLATATVQDDAQASYAAKISKEEALIDWAEPAAVIARRIRAFNPAPGCYSF 239
Query: 239 MMIGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ +R+K+ +Q VE + PGE+I + ++ C G + + LQ AG R +
Sbjct: 240 LEG----QRLKIWAAQSVEHGAERLPGEIIASDDSGISVCCGDGVILLKTLQMAGSRAMQ 295
Query: 294 IGDFLLGCP--VIIGCIVG 310
+ L G G G
Sbjct: 296 ASELLRGHSELFAPGKRFG 314
>gi|282891953|ref|ZP_06300432.1| hypothetical protein pah_c200o122 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498213|gb|EFB40553.1| hypothetical protein pah_c200o122 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 319
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 108/310 (34%), Positives = 177/310 (57%), Gaps = 9/310 (2%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M ++VVF GT +FA L L++S +V+V T+P R G R + V + V + A +
Sbjct: 1 MPVMKVVFFGTPQFAANVLSDLLNSHIDVVAVITKPDRAQG-RSKQLVPTPVKQVALMQA 59
Query: 60 LPALVPTKL---GQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + +F D+ VVVAYG +I Q +L+ K+G N HASLLP++
Sbjct: 60 TPIPCFQPELVSAPEFADTLAAFKPDLFVVVAYGEIIKQHLLDMPKMGCINLHASLLPKY 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAIM G++E G+ IM M K +D G + + + N + ++Q L + +H
Sbjct: 120 RGAAPIQRAIMNGESEIGVTIMHMVKKMDAGDMIKKASIVVDENQSFPEIEQALCRIGSH 179
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
A++E + ++E PQ + +TYA KI + +++ RSA ++H+ +RA++P PGAW
Sbjct: 180 ALLEVLREIEAGASMRQPQNHDEVTYAPKIELEDCYIDWNRSASDLHHLVRAVTPEPGAW 239
Query: 237 LEMMIGNKHERIKLLESQ-LVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+ + + +R+++L+SQ + G G+PGE++ +AC +G++RI+ LQ G +
Sbjct: 240 CYVEVKQQKKRLRILKSQMMTSGSGQPGEILGYGKEGLIVACGEGSLRIVTLQLEGKNAM 299
Query: 293 DIGDFLLGCP 302
D + G P
Sbjct: 300 SAEDLMRGIP 309
>gi|322434766|ref|YP_004216978.1| methionyl-tRNA formyltransferase [Acidobacterium sp. MP5ACTX9]
gi|321162493|gb|ADW68198.1| methionyl-tRNA formyltransferase [Acidobacterium sp. MP5ACTX9]
Length = 313
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 96/317 (30%), Positives = 156/317 (49%), Gaps = 14/317 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VF GT EFAV TL+A++ + H + V +QP R AG RG+ + AV A LP
Sbjct: 1 MKLVFCGTPEFAVGTLEAVIEAGHQVALVVSQPDRAAG-RGMTLQVGAVKAAALRLGLPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA-------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ P K+ + D +VVAYG +IP +L K G N H SLLP+
Sbjct: 60 VQPEKIKNNLELRERLEAIAAEPGGLDAILVVAYGRIIPDWMLALPKHGCINLHGSLLPK 119
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+RGAAPIQ A+ G+ TG+ M++D LDTGP+ + PI+ L + L+ + +
Sbjct: 120 YRGAAPIQWAVAKGETLTGVTTMRLDAGLDTGPMLLAQVEPIAPEETAEDLFESLAEVGS 179
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+ + LE ++ Q T A + + + R++ A+ + R P+PGA
Sbjct: 180 KLMVKTLAGLEDGSIDPVEQDHTAATLAPILKREDGRIDLTLGAKVCVDRWRGFQPWPGA 239
Query: 236 WLEMMIGNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLD 293
W + + +++ + + EG GEV + + C + + ++ +Q G + +
Sbjct: 240 WTSL----RGKKLIVQRMCVGEGACVAGEVRVVGDRMFVGCGESEIELLEVQMEGKKKMA 295
Query: 294 IGDFLLGCPVIIGCIVG 310
+FL G V G VG
Sbjct: 296 AAEFLRGFQVKTGERVG 312
>gi|255970685|ref|ZP_05421271.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T1]
gi|255961703|gb|EET94179.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T1]
Length = 314
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 100/307 (32%), Positives = 167/307 (54%), Gaps = 12/307 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M ++VFMGT F+V L++L+ + + + +V TQP RP G R + V + A + ++
Sbjct: 1 MMTKIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVG-RKKVITPTPVKEAALKHNI 59
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + D+ V A+G +P++IL A KLG N HASLLP++RG
Sbjct: 60 LVLQPEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGG 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ +I+ G+ ETG+ IM+M K +D G + R +PI+ + + ++LS+L ++
Sbjct: 120 APVHYSIIEGEKETGVTIMEMVKKMDAGAILAQRAIPITKQDDVGTMFEKLSILGKELLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + PQ+E T++ I++ + R+++ ++AE + N +R + P+P A+
Sbjct: 180 ETLPKLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWPTAFTTY 239
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N K+ + PG +I IAC +G ++I RLQ AG L
Sbjct: 240 QGTNW----KIWAVTPLTETTTSAPGTIIQRSKKALWIACGEGTVLQIDRLQPAGKGQLT 295
Query: 294 IGDFLLG 300
I +FL G
Sbjct: 296 IQEFLNG 302
>gi|292493780|ref|YP_003529219.1| methionyl-tRNA formyltransferase [Nitrosococcus halophilus Nc4]
gi|291582375|gb|ADE16832.1| methionyl-tRNA formyltransferase [Nitrosococcus halophilus Nc4]
Length = 322
Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats.
Identities = 112/312 (35%), Positives = 174/312 (55%), Gaps = 7/312 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT EFA L+ LV + +SI +VYTQP RP+G RG + S V A LP
Sbjct: 4 PLQIVFAGTPEFAAVVLRRLVETEYSIKAVYTQPDRPSG-RGRQLTPSPVKAIATAHQLP 62
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P+ L + + L+ D+ VVVAYGL++P +L LG N HASLLPRWRGAA
Sbjct: 63 VYQPSSLKDKTSQAQLAALAPDLMVVVAYGLLLPTAVLQIPPLGCINIHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+MAGD ETG++IM+M+ LDTGPV + P+ + A + L+ L A A+++
Sbjct: 123 PIQRALMAGDQETGVSIMQMEAGLDTGPVLHTVRYPLQPDDTAATVHDRLAELGAEALLQ 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + + Q EN YA KI K E +++ + A + +RA +P+P A ++
Sbjct: 183 CLPAIAEGTATPTLQDENQACYAPKIHKEEAWLDWSQPATFLERQVRAFNPWPVAQTQIK 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ R+ + E PG ++ +A +G +R++++Q AG R + + +
Sbjct: 243 --DQILRVWSATALATETAASPGTLLAANKTGIDVATGKGVLRLLKVQPAGKRAMAVQAY 300
Query: 298 LLGCPVIIGCIV 309
L P+ G ++
Sbjct: 301 LNAHPLTPGSVL 312
>gi|160901541|ref|YP_001567122.1| methionyl-tRNA formyltransferase [Petrotoga mobilis SJ95]
gi|160359185|gb|ABX30799.1| methionyl-tRNA formyltransferase [Petrotoga mobilis SJ95]
Length = 319
Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats.
Identities = 105/311 (33%), Positives = 167/311 (53%), Gaps = 17/311 (5%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
++VFMGT +F L+ L+ ++ ++V V++QP +P G RG K AV + A ++++P
Sbjct: 8 KIVFMGTPDFGAQVLEELIKNNFNVVGVFSQPDKPKG-RGKKFQPPAVKEVALKYNVPVF 66
Query: 64 VPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P + + E FL N D+ + A+G ++ +L G +N HASLLP++RGAAPI
Sbjct: 67 QPKSVNKGEGFDFLKELNPDIIITAAFGKILKTNVLKLPPKGCWNVHASLLPKYRGAAPI 126
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QR I G+ ETGI+I KM + LD G +A + VPI N N + ++L L ++E +
Sbjct: 127 QRVIENGEKETGISIFKMVEALDAGDIAIQKSVPIEINDNYGIVYEKLLSLAKETVLEFL 186
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + L PQ E +YAEKI+K + V+F A VHN IRA P+PG +
Sbjct: 187 NSFDHLTLK--PQNEEEASYAEKITKEDLIVDFNNDAIKVHNKIRAYDPYPG----VRSV 240
Query: 243 NKHERIKLLESQL------VEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ E +K+ S+ +E + +PG +I + C GAV+I +Q G + +
Sbjct: 241 YEKEEVKIFGSEFSDDLFTIENKEEPGTIIRIEKDGILVKCRDGAVKIKEIQFPGKKRIS 300
Query: 294 IGDFLLGCPVI 304
D + G +
Sbjct: 301 TIDAINGKKLK 311
>gi|34499719|ref|NP_903934.1| methionyl-tRNA formyltransferase [Chromobacterium violaceum ATCC
12472]
gi|39931209|sp|Q7NQ76|FMT_CHRVO RecName: Full=Methionyl-tRNA formyltransferase
gi|34105570|gb|AAQ61924.1| methionyl-tRNA formyltransferase [Chromobacterium violaceum ATCC
12472]
Length = 307
Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats.
Identities = 128/313 (40%), Positives = 179/313 (57%), Gaps = 12/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA A L+ L+++ H I V TQP RPAG RG+K S V + A L
Sbjct: 1 MKLIFAGTPEFAAAALRELIAAGHEIALVLTQPDRPAG-RGMKLKPSPVKEVALAHGLRV 59
Query: 63 LVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + + ADV VV AYGL++PQ +L+ G N HASLLPRWRGAA
Sbjct: 60 EQPEKLRGNQEAQQMLRDIQADVMVVAAYGLILPQDVLDIPARGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI+AGD+ETGI IM+MD LDTG + + V I+++ A L +L+ A A+VE
Sbjct: 120 PIQRAILAGDDETGITIMQMDVGLDTGDMLSIHPVAIAADETAATLHDKLAACGAQAIVE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + Q E+G+TYA+K+SK E V++ AE V IRA +P PGA+ ++
Sbjct: 180 TL--GRLDRIVPRKQPEDGVTYAQKLSKAEAEVDWALPAEQVARAIRAYNPAPGAFTQLG 237
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E +KL + G +PG V++ + QG VR+ LQ AGG+ L DF
Sbjct: 238 G----EPLKLWMASAEPGSAEPGAVVSADADGVLVGAGQGLVRVSVLQAAGGKRLAARDF 293
Query: 298 LLGCPVIIGCIVG 310
+ G + G +G
Sbjct: 294 VAGKSLPAGTRLG 306
>gi|288803649|ref|ZP_06409079.1| methionyl-tRNA formyltransferase [Prevotella melaninogenica D18]
gi|288333889|gb|EFC72334.1| methionyl-tRNA formyltransferase [Prevotella melaninogenica D18]
Length = 340
Score = 172 bits (436), Expect = 6e-41, Method: Composition-based stats.
Identities = 95/330 (28%), Positives = 158/330 (47%), Gaps = 28/330 (8%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M +R+VFMGT EFAV +L+ LV + +++V+V TQP +P GR + S V A E
Sbjct: 1 MKKENIRIVFMGTPEFAVESLKTLVQNGYNVVAVVTQPDKPVGRHQEQLQPSPVKLYALE 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+LP L P K+ ++ L VV ++P+ + + +LG +N HA+LLP++R
Sbjct: 61 HNLPVLQPVKMKDADFIDELRSYKADMQVVVAFRMLPEMVWSMPRLGTFNVHAALLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ G+ ETG+ +DK +DTG + + I + + L L A
Sbjct: 121 GAAPINWAVINGETETGVTTFFLDKDIDTGRIILQKPFAIPDTADVEYVYDGLMYLGAKI 180
Query: 178 MVEAMDKLEQNNLPLS---------------PQIENGI--TYAEKISKGETRVNFCRSAE 220
+E +D + S PQ+ +A KI K +N+ +SA+
Sbjct: 181 AMETIDLIASKLPEDSLDNVDFSAVLDGISAPQVCEDAELHHAPKIFKETCEINWNQSAK 240
Query: 221 NVHNHIRALSPFPGAWLEMMIGNKH----ERIKLLESQLVEGE--GKPGE--VINPNFTI 272
V++ +R LSP+PG W + + +K+ ++ + G PG V +
Sbjct: 241 KVYDFVRGLSPYPGTWSTLCSIEDNGVKPLVMKVYKTAKSDRTSVGTPGTLVVEKTRLYV 300
Query: 273 ACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
S + ++ +Q G + +D+ FL G
Sbjct: 301 NTSDNLLELLDIQLTGKKRMDVRSFLNGFK 330
>gi|323135725|ref|ZP_08070808.1| methionyl-tRNA formyltransferase [Methylocystis sp. ATCC 49242]
gi|322398816|gb|EFY01335.1| methionyl-tRNA formyltransferase [Methylocystis sp. ATCC 49242]
Length = 303
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 139/303 (45%), Positives = 196/303 (64%), Gaps = 2/303 (0%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +FA A L+ + + H + +VYTQPPRPAG RG+ S+VH+ A+ L P
Sbjct: 1 MGTPDFATALLREICARGHDVAAVYTQPPRPAG-RGMSEKKSSVHQFAESRGLAVRTPRS 59
Query: 68 LGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
L E + + +DVAVV AYGL++PQ IL+A K G N H SLLPRWRGAAPIQRAI
Sbjct: 60 LRSAEEAEAFAALGSDVAVVAAYGLLLPQPILDAPKHGCLNLHGSLLPRWRGAAPIQRAI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
MAGD E+G+ +MKMD LDTGPVA + PI ++ L +L+ L A M +A+D L
Sbjct: 120 MAGDAESGVMVMKMDAGLDTGPVALTARTPIGPDMTAGELHDKLAELGAPLMADALDLLA 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ L +PQ + G YA+KI K E R+++ RSA ++HNH+R L+PFPGA+ E +G+ E
Sbjct: 180 KGELRFTPQTQEGACYAQKIDKAEGRIDWRRSARDLHNHVRGLAPFPGAFFESDLGHGVE 239
Query: 247 RIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIG 306
R+K+L +++ +G G PG ++ IAC +GA+R++R+QRAG + I +FL G + G
Sbjct: 240 RVKVLRTRVEDGRGAPGAALDDAGLIACGEGALRLLRVQRAGKGEMGIEEFLRGRKLTRG 299
Query: 307 CIV 309
+
Sbjct: 300 VTL 302
>gi|114777102|ref|ZP_01452122.1| methionyl-tRNA formyltransferase [Mariprofundus ferrooxydans PV-1]
gi|114552623|gb|EAU55083.1| methionyl-tRNA formyltransferase [Mariprofundus ferrooxydans PV-1]
Length = 326
Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats.
Identities = 113/313 (36%), Positives = 167/313 (53%), Gaps = 10/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT F+V LQAL++ +V V +QP R +G RG+K SAV + A + +
Sbjct: 16 MKIVFAGTPGFSVPCLQALIACRDVDVVGVVSQPDRKSG-RGMKLQPSAVKQAALDAGID 74
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P +L S AD+ VVVA+G+++P+ L A K+ N HASLLPRWRGA
Sbjct: 75 VITPERLRDNTEALAWLESKQADMLVVVAFGMILPKSWLEAVKIAAVNVHASLLPRWRGA 134
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API+RA++AGDN+TG+ IM+M++ LDTG V R +PI + L L+ L A +V
Sbjct: 135 APIERALLAGDNQTGVCIMQMEEGLDTGGVYACRTLPIDETTTGSELWFALAPLGAQLLV 194
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + P PQ GITYA K+S E V++ + A +V +R SP PGA +
Sbjct: 195 ETLPAIAAGLQPE-PQPAEGITYAAKLSNDERVVDWSQPAASVARVVRCFSPQPGARTQ- 252
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAV-RIMRLQRAGGRVLDIGD 296
K ++ + G V + I C GA+ RI LQ G + + D
Sbjct: 253 -AQGKWLKLIVGSVTDQRSTMAAGSVAGTDGALDIVCGDGALYRIESLQPEGKKAMSAAD 311
Query: 297 FLLGCPVIIGCIV 309
+L G + +G +
Sbjct: 312 YLRGASLKVGDAL 324
>gi|323524424|ref|YP_004226577.1| methionyl-tRNA formyltransferase [Burkholderia sp. CCGE1001]
gi|323381426|gb|ADX53517.1| methionyl-tRNA formyltransferase [Burkholderia sp. CCGE1001]
Length = 328
Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats.
Identities = 123/321 (38%), Positives = 171/321 (53%), Gaps = 15/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRVVF GT EFA A L A+ + + V TQP RPAG RG+K S V + A E L
Sbjct: 4 SLRVVFAGTPEFASAALAAIHGAGFPVPLVLTQPDRPAG-RGMKLQASPVKRYAVEHGLA 62
Query: 62 ALVPTKLGQEEYE---------QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + Q + DV VV AYGL++PQ +L+ G N HASL
Sbjct: 63 VAQPPSLRRAGKYPGEAAAAIEQLRATPHDVMVVAAYGLILPQEVLDIAPFGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETGI +M+MD LDTG + + PIS++ TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGITLMQMDAGLDTGAMISETRTPISADDTTASLHDRLAQ 182
Query: 173 LCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A + ++ L +PQ +G+TYAEKI K E +++ R A + +RA P
Sbjct: 183 DGARLIVEALVELERSGKLSATPQPADGVTYAEKIGKHEAALDWRRPAAALARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + +I +++V+ PG +I+ +AC +GA+R+ +LQ+ G
Sbjct: 243 FPGGVATLED-GTAIKIWAASAEVVKSTAAPGTLISVSPEGVLVACGEGALRLTQLQKPG 301
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L + +FL G + G
Sbjct: 302 GKRLPVREFLAGFALAPGQRF 322
>gi|114327355|ref|YP_744512.1| methionyl-tRNA formyltransferase [Granulibacter bethesdensis
CGDNIH1]
gi|122327669|sp|Q0BUB3|FMT_GRABC RecName: Full=Methionyl-tRNA formyltransferase
gi|114315529|gb|ABI61589.1| methionyl-tRNA formyltransferase [Granulibacter bethesdensis
CGDNIH1]
Length = 310
Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats.
Identities = 117/311 (37%), Positives = 172/311 (55%), Gaps = 19/311 (6%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
+ FMG+ +F+V L AL + H I +VYTQPPRPAG RG + VH+ A+ L
Sbjct: 7 LAFMGSPDFSVPALHALHQAGHHIAAVYTQPPRPAG-RGHRLTPCPVHRAAEALGLEVRH 65
Query: 65 PT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P K +E+E F + N D AVV AYGL++P+ +L+ + G N HASLLPRWRGA+PI
Sbjct: 66 PALLKNAADEHEAFRALNLDAAVVAAYGLILPRVMLDTPQRGCLNIHASLLPRWRGASPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+AGD E+G+ IM+M++ LDTGP+ R VPI+ T L L A A EA+
Sbjct: 126 QNAILAGDTESGVTIMRMEEGLDTGPMLLKRAVPITETTTTPELHDAL----ATAGAEAI 181
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + Q + YA K+S+ + +++ + A + +RAL+P+PG + +
Sbjct: 182 LHVLETQPDGENQDDALACYAPKLSRADGLLDWSQPAALLARRVRALNPWPGTFSGSL-- 239
Query: 243 NKHERIKLLESQ-LVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
K+L + + E G PG VI + IAC GA+ + ++Q+ G LD FL
Sbjct: 240 ------KILAAHAVTEASGIPGTVIGIGDDTLLIACGDGALCLDKVQKPGRPALDAAAFL 293
Query: 299 LGCPVIIGCIV 309
G + G +
Sbjct: 294 RGHKLPAGTRL 304
>gi|182439854|ref|YP_001827573.1| methionyl-tRNA formyltransferase [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|229487566|sp|B1W473|FMT_STRGG RecName: Full=Methionyl-tRNA formyltransferase
gi|178468370|dbj|BAG22890.1| putative methionyl-tRNA formyltransferase [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 310
Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats.
Identities = 105/314 (33%), Positives = 161/314 (51%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++AQE +
Sbjct: 1 MKLVFAGTPEVAVPALDALIASDRHEVAAVVTRPDAPAG-RGRRLVASPVAERAQEAGIE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K EE+ + D VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 60 VLKPAKPRDEEFLARLREIAPDCCPVVAYGALLPKVALDVPARGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A+MAGD TG + +++ LD+GPV + + + L L+ A +
Sbjct: 120 PVQHAVMAGDEVTGASTFLIEEGLDSGPVYGVLTEEVRPTDTSGDLLTRLAFAGAGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ G+T A KI+ + +V + A V +R +P PGAW
Sbjct: 180 TMDGIEDGTLHAVPQPHEGVTLAPKITVEDAQVQWSAPALRVDRVVRGCTPAPGAWTVF- 238
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+KL+++ V + PGE+ N + AV ++ +Q G + + D
Sbjct: 239 ---RGERLKLIQATPVLDRTDLAPGELSAAKNNVYVGTGSHAVELLWVQPQGKKPMRGAD 295
Query: 297 FLLGCPVIIGCIVG 310
+ G + G ++G
Sbjct: 296 WARGVRIAHGELLG 309
>gi|156743168|ref|YP_001433297.1| methionyl-tRNA formyltransferase [Roseiflexus castenholzii DSM
13941]
gi|189044564|sp|A7NNY4|FMT_ROSCS RecName: Full=Methionyl-tRNA formyltransferase
gi|156234496|gb|ABU59279.1| methionyl-tRNA formyltransferase [Roseiflexus castenholzii DSM
13941]
Length = 313
Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats.
Identities = 99/314 (31%), Positives = 154/314 (49%), Gaps = 6/314 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M+LR+VF+G+ FAV L+ LV S + +V V TQP RPAG RG V + V + A
Sbjct: 1 MSLRIVFLGSPTFAVLPLERLVADSRYQVVGVVTQPDRPAG-RGKMPVATPVKQAALRLG 59
Query: 60 LPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP L P L L+ DV VV AYG ++ + +L LG+ N H SLLP +RG
Sbjct: 60 LPVLTPETLRDPAAVADLADLRPDVGVVAAYGEILRRDVLAIPPLGYVNIHPSLLPLYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
+P+ AI+ GD ETG+ IM ++ +D GP+ R VP+ + T L +EL + A +
Sbjct: 120 PSPVAGAILNGDAETGVTIMVIEAKMDAGPILAQRVVPLPPDARTGSLTRELFAIGADML 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+E +D + PQ T+ + +S+ + +++ + A + RA P+PGA
Sbjct: 180 LETLDAYATGAITPHPQDHARATFTKLLSREDGIIDWSQPALRIERMTRAYDPWPGATTT 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVIN--PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ S + PG +++ +A G + + +Q AG R L D
Sbjct: 240 WRGAPLKIIAARVRSDRH-SDAPPGTLLDTAEGLAVATGDGLLVLETVQPAGKRPLPAAD 298
Query: 297 FLLGCPVIIGCIVG 310
+ G + G +G
Sbjct: 299 WRRGVRLTGGERLG 312
>gi|306840228|ref|ZP_07473003.1| methionyl-tRNA formyltransferase [Brucella sp. BO2]
gi|306289833|gb|EFM61012.1| methionyl-tRNA formyltransferase [Brucella sp. BO2]
Length = 294
Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats.
Identities = 157/291 (53%), Positives = 200/291 (68%), Gaps = 1/291 (0%)
Query: 16 ATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK-LGQEEYE 74
L A++ + +V+ YTQPPRPAGRRGL+ S VH+KA++F +P P G EE +
Sbjct: 2 PILTAIIGHGYEVVAAYTQPPRPAGRRGLELTRSPVHEKAEQFGIPVFTPKSLKGAEEQD 61
Query: 75 QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETG 134
F S ADVA+VVAYGL++P+ IL+A +LG YNGHASLLPRWRGAAPIQRAIMAGD ETG
Sbjct: 62 VFASLEADVAIVVAYGLLLPKAILDAPRLGCYNGHASLLPRWRGAAPIQRAIMAGDAETG 121
Query: 135 IAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSP 194
+ IMKMD+ LDTGPVA KV I+ ++ L LS++ A M+ A+ LE+ +L L P
Sbjct: 122 MMIMKMDEGLDTGPVAMAEKVAITPDMTAGELHDRLSMIGADLMIRALGALERESLALQP 181
Query: 195 QIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQ 254
Q E G+TYA KI K E R+++ + A++VHN IR LSPFPGAW EM I ER+KL S
Sbjct: 182 QAEEGVTYAAKIDKAEARIDWSKPAKDVHNSIRGLSPFPGAWCEMEINGAVERVKLQRST 241
Query: 255 LVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVII 305
L EG G PG V++ TIAC +GAVR+ LQR+GG+ L +FL G V
Sbjct: 242 LGEGSGAPGTVLDDRLTIACGEGAVRLATLQRSGGKPLPAQEFLRGQRVTK 292
>gi|67458717|ref|YP_246341.1| methionyl-tRNA formyltransferase [Rickettsia felis URRWXCal2]
gi|71153519|sp|O33523|FMT_RICFE RecName: Full=Methionyl-tRNA formyltransferase
gi|67004250|gb|AAY61176.1| Methionyl-tRNA formyltransferase [Rickettsia felis URRWXCal2]
Length = 303
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 104/310 (33%), Positives = 167/310 (53%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMGT EFAV L+ L+ + H + +V+ Q P+ G RGL S +H+ A E +P
Sbjct: 1 MKVIFMGTPEFAVPALKKLI-THHEVKAVFAQQPKAKG-RGLNLAKSPIHQLAFEHQIPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P+ + NAD+ VV+AYG ++P+ IL A K G N H S LPR RGAAP
Sbjct: 59 YTPSTLRNDKTINLINKINADIIVVIAYGFIVPKAILEAKKYGCLNIHPSDLPRHRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QR I+ GD ++ + IM+MD LDTG + + L + + L A +++
Sbjct: 119 LQRTIIEGDRKSSVCIMRMDAGLDTGDILMKEDFDLEERTTLEELHNKCANLGAELLIKT 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ Q +G+TYA K++K E ++N+ SA + IR ++P+PGA+
Sbjct: 179 LANIDNI--VPIKQSSDGVTYAHKLTKEEGKINWYESAYKIDCKIRGMNPWPGAYFSY-- 234
Query: 242 GNKHERIKLLESQL--VEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ IK+LE++ E G VI+ IAC G +R+ +LQ+ + L+I +FL
Sbjct: 235 --NDKIIKILEAEYLNAEHHFTSGTVISDKLEIACGSGILRVKKLQQESKKALNIEEFLR 292
Query: 300 GCPVIIGCIV 309
G ++ I+
Sbjct: 293 GTNILKDTIL 302
>gi|255020223|ref|ZP_05292292.1| Methionyl-tRNA formyltransferase [Acidithiobacillus caldus ATCC
51756]
gi|254970365|gb|EET27858.1| Methionyl-tRNA formyltransferase [Acidithiobacillus caldus ATCC
51756]
Length = 311
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 118/311 (37%), Positives = 178/311 (57%), Gaps = 9/311 (2%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R+VF GT EFA L L+S +V V+TQP RPAG RG K S V A+ L
Sbjct: 6 RIVFAGTPEFARVVLAGLLSGPEPVVGVFTQPDRPAG-RGRKLQSSPVKALAEAHGLAIF 64
Query: 64 VPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P E + AD+ +VVAYG ++P+ +L+A +LG N HASLLP WRGAAPI
Sbjct: 65 QPESCRDPEVPGILRALQADLLIVVAYGQILPETVLHAPRLGSINVHASLLPAWRGAAPI 124
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
RA+ AGD+ETGI+IM+M+ LD+GPV + R +PI ++ A L L+ L A A+ EA+
Sbjct: 125 ARALAAGDSETGISIMQMEAGLDSGPVLWRRSLPIRADDTAASLHDRLAELGAVALREAL 184
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D+L L PQ ++YA K+ K E +++ ++A + +RA +PFP A
Sbjct: 185 DRLWCGTLTPEPQDPALVSYARKLRKAEGLLDWQQAATLLERLVRAFNPFPVAH----SQ 240
Query: 243 NKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ + +++ +++ G G+PG ++ +AC +G++ + R+Q +G L GDFL
Sbjct: 241 WRGQIVRVWSARIGVGCGEPGRILALHPDGPEVACGEGSLILTRVQPSGKSALSGGDFLR 300
Query: 300 GCPVIIGCIVG 310
G + +G +G
Sbjct: 301 GYRLAVGEALG 311
>gi|114330412|ref|YP_746634.1| methionyl-tRNA formyltransferase [Nitrosomonas eutropha C91]
gi|122314566|sp|Q0AJ02|FMT_NITEC RecName: Full=Methionyl-tRNA formyltransferase
gi|114307426|gb|ABI58669.1| methionyl-tRNA formyltransferase [Nitrosomonas eutropha C91]
Length = 316
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 118/313 (37%), Positives = 174/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT FA L+A+ S I+ V TQP RPAG RG+K S V AQ++++P
Sbjct: 1 MKIIFAGTPVFAAKALEAVQKSGFDILLVLTQPDRPAG-RGMKLQASPVKILAQQYNIPL 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P L + + L DV +V AYGL++P+ +L + G N HASLLPRWRGAAP
Sbjct: 60 LQPETLKSPDIQTQLETLKPDVMIVAAYGLILPEAVLRIPRHGCINIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA++ GD ETGI+IM+MD+ LDTG V R I + A L +L+ L +VE
Sbjct: 120 IQRALLEGDAETGISIMQMDQGLDTGAVLLKRAFLIEPHDTAATLHDKLADLGGKCIVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L+Q+ L + Q YA KI K E +++ R + ++ IR +P+PGA+ +
Sbjct: 180 LTLLDQDKLTPTLQDNASACYAAKIRKSEAEIDWTRDSTHIDRMIRTFNPYPGAFTSL-- 237
Query: 242 GNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
IKL ++ ++ + GE+I + +AC + A+ I LQ+AGG+ L
Sbjct: 238 --HGSMIKLWQANIINRSDTRQAGEIIAADHNGIIVACGRDALSINILQKAGGKKLTAAQ 295
Query: 297 FLLGCPVIIGCIV 309
FL G P+ G
Sbjct: 296 FLAGHPLQPGEHF 308
>gi|315640286|ref|ZP_07895403.1| methionyl-tRNA formyltransferase [Enterococcus italicus DSM 15952]
gi|315483948|gb|EFU74427.1| methionyl-tRNA formyltransferase [Enterococcus italicus DSM 15952]
Length = 316
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 102/320 (31%), Positives = 166/320 (51%), Gaps = 15/320 (4%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M + +++FMGT F+V L+ L IV+V TQP RP G R + V + A +
Sbjct: 1 MNMTKLIFMGTPAFSVPILEGLSEQGSEIVAVVTQPDRPVG-RKKIVQPTPVKEAALKLG 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P K G +E EQ ++ D+ V AYG +P+R+L A G N HASLLP++RG
Sbjct: 60 IPVLQPEKLSGSQELEQLIALAPDLLVTAAYGQFLPERLLQAPTHGAINVHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP+ AI+ G+ ETG+ IM+M K +D G + +PI+S + + +LS+L +
Sbjct: 120 GAPVHYAIIEGEQETGVTIMEMIKKMDAGGIYAQESLPITSTDDVGTMFDKLSLLGKELL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + L L PQ E +T++ I++ + +++ ++A + +R + P+P A+
Sbjct: 180 LRTLPTLLSGALQPIPQNEEEVTFSPNITREQEAIDWQKTAHQIDCQVRGMRPWPVAFTT 239
Query: 239 MMIGNKHERIKLLES--QLVEGEGKPGEVINPN---FTIACSQGAVR-IMRLQRAGGRVL 292
R K+++ Q+ + PG +I IAC +G V ++RL+ AG
Sbjct: 240 YEGA----RWKIVDVQPQVKKTTATPGTIIEKTKTILAIACGEGTVLHLLRLKPAGKGEQ 295
Query: 293 DIGDFLLGC--PVIIGCIVG 310
I FL G V +G +G
Sbjct: 296 TIASFLNGSGQSVQVGERLG 315
>gi|126649675|ref|ZP_01721911.1| methionyl-tRNA formyltransferase [Bacillus sp. B14905]
gi|126593394|gb|EAZ87339.1| methionyl-tRNA formyltransferase [Bacillus sp. B14905]
Length = 313
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 96/312 (30%), Positives = 161/312 (51%), Gaps = 10/312 (3%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
++FMGT +F+ L+ L + I +V TQP RP G R V A E LP +
Sbjct: 4 IIFMGTPDFSAPILRMLHEEGYDIKAVVTQPDRPVG-RKRVLTPPPVKAAALELGLPIIQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G E +Q L+ D+ + A+G ++P+ +L+A LG N HASLLP++RG API
Sbjct: 63 PEKLRGSNELQQILALQPDIVITAAFGQILPKELLDAPALGCINVHASLLPKYRGGAPIH 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+AIM G+ ETG+ IM M + LD G + R +PI + +T G ++LS++ + + +
Sbjct: 123 QAIMDGEKETGVTIMYMAEKLDAGDIISQRAIPIEQDDHTGGFFEKLSIVGRDLLKDTLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ + Q E +T+A IS+ + R+++ + A ++N +R L P+P A+ GN
Sbjct: 183 SIINGTNSRTVQDETQVTFASNISREQERIDWTKDATTLYNQVRGLHPWPVAYTTFEDGN 242
Query: 244 KHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLL 299
++ + + PG V+ +F +A G + + +Q AG + + ++L
Sbjct: 243 FKVWWAIIG--NSKHDTIPGTVVAIAKDHFEVAAGNGTTLALFDVQPAGKKRMTAEEYLR 300
Query: 300 --GCPVIIGCIV 309
G + IG
Sbjct: 301 GTGSKLQIGDQF 312
>gi|307326809|ref|ZP_07606001.1| methionyl-tRNA formyltransferase [Streptomyces violaceusniger Tu
4113]
gi|306887572|gb|EFN18566.1| methionyl-tRNA formyltransferase [Streptomyces violaceusniger Tu
4113]
Length = 384
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 98/315 (31%), Positives = 160/315 (50%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+R+VF GT E A+ L AL++S H +V+V T+P PAG RG + V S V ++A+E +
Sbjct: 74 PMRLVFAGTPEVALPALDALIASEKHEVVAVVTRPDAPAG-RGRRMVASPVAERAEEAGI 132
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K E+ D VVAYG ++P+ L G+ N H SLLP WRGA
Sbjct: 133 EVLKPAKPRDPEFLARLGEIAPDCCPVVAYGALLPKAALEIPAHGWVNLHFSLLPAWRGA 192
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+Q +++AGD TG + ++++ LD+GPV + + + + L L+ A +
Sbjct: 193 APVQHSVLAGDEMTGASTFQIEEGLDSGPVFGVVTEEVRATDTSGDLLTRLAFAGAGLLE 252
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
MD +E L PQ GI+ A KI+ + ++++ A V +RA +P PGAW
Sbjct: 253 ATMDGIENGTLLPVPQPAEGISLAPKITVEDAKIDWTAPALRVDRLVRACTPAPGAWTTF 312
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ ER+K++ ++ V + +PG + + AV + ++ G + +
Sbjct: 313 ----REERLKVVSARPVADRTDLEPGRLAATKKAVYVGTGSHAVELAWVRPQGKKPMLAA 368
Query: 296 DFLLGCPVIIGCIVG 310
D+ G + G +G
Sbjct: 369 DWARGVRIAEGERLG 383
>gi|294678911|ref|YP_003579526.1| methionyl-tRNA formyltransferase [Rhodobacter capsulatus SB 1003]
gi|294477731|gb|ADE87119.1| methionyl-tRNA formyltransferase [Rhodobacter capsulatus SB 1003]
Length = 297
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 135/304 (44%), Positives = 183/304 (60%), Gaps = 10/304 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT EF+V L+AL + H +V+VY+QPPRPAG RG S V +A+ L
Sbjct: 1 MRVIFMGTPEFSVPVLEAL-AVRHQVVAVYSQPPRPAG-RGKALRPSPVQARAEALGLSV 58
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E+ E F + NAD+AVVVAYGL++PQ IL+A + G N HASLLPRWRGAAP
Sbjct: 59 RHPLNFKAPEDREAFAALNADIAVVVAYGLILPQAILDAPRRGCLNIHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAI++GD ETGI IM+M+ LDTGPV + I + T L LS + A + E
Sbjct: 119 IHRAILSGDAETGICIMQMEAGLDTGPVLLREALTIGATETTGELHDRLSAMGARMICET 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+++L+ Q E G+TYA KI K E ++++ R A + + LSPFPGAW E+
Sbjct: 179 LERLDDL--TPEAQSEAGVTYAAKIDKAEAKIDWTRPAAELVRLVNGLSPFPGAWCEVAG 236
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KLL ++ EG G PG V+ F IAC GA+R++ QR G + + + L G
Sbjct: 237 ----ERVKLLRAEPAEGCGDPGTVL-HGFDIACGTGALRVLEAQREGKKPMPSAEILKGL 291
Query: 302 PVII 305
+
Sbjct: 292 ALPA 295
>gi|169827063|ref|YP_001697221.1| methionyl-tRNA formyltransferase [Lysinibacillus sphaericus C3-41]
gi|238688172|sp|B1HQE4|FMT_LYSSC RecName: Full=Methionyl-tRNA formyltransferase
gi|168991551|gb|ACA39091.1| Methionyl-tRNA formyltransferase [Lysinibacillus sphaericus C3-41]
Length = 313
Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 162/314 (51%), Gaps = 14/314 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
++FMGT +F+ L+ L + I +V TQP RP G R V A E LP +
Sbjct: 4 IIFMGTPDFSAPILRMLHEEGYDIKAVVTQPDRPVG-RKRILTPPPVKAAALELGLPIIQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G EE +Q LS D+ + A+G ++P+ +L+A LG N HASLLP++RG API
Sbjct: 63 PEKLRGSEELQQILSLQPDIVITAAFGQILPKELLDAPSLGCINVHASLLPKYRGGAPIH 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+AI+ G+ ETG+ IM M + LD G + R +PI + +T + +LS++ + + +
Sbjct: 123 QAIIDGEKETGVTIMYMAEKLDAGDIISQRAIPIELDDHTGRVFDKLSMVGRDLLKDTLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ + Q E +T+A IS+ + R+++ A ++N +R L P+P A+ GN
Sbjct: 183 SIINRTNNRTVQDETQVTFASNISREQERIDWTNDATTLYNQVRGLHPWPVAYTTFEDGN 242
Query: 244 KHERIKLLESQL--VEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDF 297
K+ + + + + PG V+ +F +A G + + +Q AG + + ++
Sbjct: 243 F----KVWWATIGKSKHDTIPGTVVAIAKDHFEVAAGNGTTLALYDVQPAGKKRMTAEEY 298
Query: 298 LL--GCPVIIGCIV 309
L G + IG
Sbjct: 299 LRGTGSKLQIGDQF 312
>gi|121999100|ref|YP_001003887.1| methionyl-tRNA formyltransferase [Halorhodospira halophila SL1]
gi|226704301|sp|A1WZH3|FMT_HALHL RecName: Full=Methionyl-tRNA formyltransferase
gi|121590505|gb|ABM63085.1| methionyl-tRNA formyltransferase [Halorhodospira halophila SL1]
Length = 310
Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats.
Identities = 115/310 (37%), Positives = 174/310 (56%), Gaps = 6/310 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R+VF GT +FAV L ALV + V+V+TQP RPAG RG + V + A+ L
Sbjct: 1 MAARIVFAGTPDFAVPGLDALVEAGVRPVAVFTQPDRPAG-RGRRLTPPPVKRAAERHGL 59
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +LG EE EQ + D+ VVVAYG ++ + +L+ + G N HASLLPRWRGAA
Sbjct: 60 GVHQPERLGAEEAEQIRALAPDLMVVVAYGQILRRNVLDVPRFGCVNVHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA++AGD +TG+ +M+MD+ LDTGP+ + PIS++ L L+ + A +V
Sbjct: 120 PIQRALLAGDEQTGVTLMQMDEGLDTGPMLARKATPISADETAGSLHDRLARIGADLLVA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ + PQ ++G+TYA K++ E+ ++ AE + +RAL+P PG +
Sbjct: 180 HLPEILAGAITPEPQPDDGVTYAAKLTNDESWLDPTEPAEQLERRVRALAPVPG--ARLQ 237
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+G R+ + E + G V + +A +G + I RL+ AGGR D+
Sbjct: 238 LGETPVRVLAARACAGRPEDRAGTVAAVGSGGIEVATGEGRLEITRLKPAGGREQTAADY 297
Query: 298 LLGCPVIIGC 307
L G ++ G
Sbjct: 298 LNGRRLVPGE 307
>gi|89891488|ref|ZP_01202993.1| methionyl-tRNA formyltransferase [Flavobacteria bacterium BBFL7]
gi|89516262|gb|EAS18924.1| methionyl-tRNA formyltransferase [Flavobacteria bacterium BBFL7]
Length = 319
Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats.
Identities = 87/313 (27%), Positives = 149/313 (47%), Gaps = 7/313 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+L++VF GT EFA L+ L +S+H IV+V T +PAG RG K S V + A + ++P
Sbjct: 4 SLKIVFFGTPEFATGVLETLYNSNHQIVAVVTAVDKPAG-RGRKINESHVKQFALKNNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P+ L E+ L V+ ++P+ + + +G +N HASLLP +RGAAP
Sbjct: 63 VLQPSNLKSSEFIDELRSYNADLQVIVAFRMLPKVVWSMPAMGTFNLHASLLPEYRGAAP 122
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ + ++G+ +D+ +DTG + + I L ++L L + +E
Sbjct: 123 INWAIINQEKKSGVTTFFIDEKIDTGAIIDQQSCDIEEYETVGTLYKKLMDLGSTLSLET 182
Query: 182 MDKLEQNNLPLSPQIENGITYAEKI-SKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ + N+ Q + + T +N+ V +R L PFP A ++
Sbjct: 183 VNNIAAGNITTQTQPMSKELKEAPKLNATNTTINWHMKTAAVDAMVRGLYPFPVAKA-VL 241
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVINPN--FTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K E IK+ + ++ E PG ++ F +ACS G + I +Q + +D+
Sbjct: 242 VQDKAETIKIYRTSILLENHEMIPGSIVIDGDIFKVACSDGFLIIDEMQLPNKKRMDVKS 301
Query: 297 FLLGCPVIIGCIV 309
L G
Sbjct: 302 LLNGYKFSADARF 314
>gi|146297086|ref|YP_001180857.1| methionyl-tRNA formyltransferase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|166214884|sp|A4XL81|FMT_CALS8 RecName: Full=Methionyl-tRNA formyltransferase
gi|145410662|gb|ABP67666.1| methionyl-tRNA formyltransferase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 311
Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats.
Identities = 105/317 (33%), Positives = 157/317 (49%), Gaps = 17/317 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ +VFMGT +FA LQ L+ +I V TQP +P G R V + A +F+L
Sbjct: 1 MDIVFMGTPDFAANILQKLIEEPQFNIKLVVTQPDKPVG-RKQILTPPPVKEFALKFNLN 59
Query: 62 ALVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P +L E N +V VVVAYG ++P+ IL K G N HASLLP +RGA
Sbjct: 60 VVQPDRLKGNEEFFEVLKKINPEVIVVVAYGKILPKEILQIPKYGCINVHASLLPEYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQR +M G N TGI IMKMD+ LDTG + + I N + L ++LS L A ++
Sbjct: 120 APIQRVLMDGKNYTGITIMKMDEGLDTGDILLQEGIEIEQNDDVITLSKKLSELGAKLLI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + Q TYA I K E ++++ SA ++N RAL +PG +
Sbjct: 180 ETLKNISNIVPV--KQDATKATYAPPIDKKEGQISWDMSAVQIYNRFRALKIWPGIFTIY 237
Query: 240 MIGNKHERIKLLESQLVE----GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+ +K+ E ++ + + G ++ + G +++ LQ GGR +
Sbjct: 238 KG----KLLKIHEMEIAKLDNLENVQNGTILGINETGILVKVKDGVIKLKELQLEGGRKM 293
Query: 293 DIGDFLLGCPVIIGCIV 309
DF+ G + G I+
Sbjct: 294 SARDFVNGYKIKKGDIL 310
>gi|255531128|ref|YP_003091500.1| methionyl-tRNA formyltransferase [Pedobacter heparinus DSM 2366]
gi|255344112|gb|ACU03438.1| methionyl-tRNA formyltransferase [Pedobacter heparinus DSM 2366]
Length = 304
Score = 171 bits (434), Expect = 9e-41, Method: Composition-based stats.
Identities = 96/309 (31%), Positives = 152/309 (49%), Gaps = 13/309 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAVA L ALV + + V T +PAG RG K SAV + A L
Sbjct: 1 MRLVFMGTPDFAVAALDALVKAGFEVAGVVTAADKPAG-RGQKLQESAVKQYAVAHGLKV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL + L VV ++P+ + N G N HASLLP++RGAAPI
Sbjct: 60 LQPLKLKDPLFLSDLKALNADLQVVVAFRMLPEVVWNMPPKGTINLHASLLPQYRGAAPI 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ E+G+ + +DTG V F KV I+ L +L A +V +
Sbjct: 120 NHAIINGEKESGVTTFFLKHEIDTGDVIFSEKVEITDEDTAGDLHDKLMHTGADLLVRTV 179
Query: 183 DKLEQNNLPLSPQI---ENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+E + PQ + + +A KI K +++ + ++N++N IR LSP+P A+ +
Sbjct: 180 KAIEAGDYKEQPQPDAAQEELKHAPKIFKEHCLIDWNQPSKNIYNLIRGLSPYPTAFTRL 239
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDI 294
+ +K+ +++L E E G ++ A G +++ LQ G + + +
Sbjct: 240 ----NDKVLKIFKAELEEKETGLAAGAFLSDGKSYLKFAAKDGFIKLTDLQYEGKKRMTV 295
Query: 295 GDFLLGCPV 303
+FL G +
Sbjct: 296 DEFLRGMRL 304
>gi|146318080|ref|YP_001197792.1| methionyl-tRNA formyltransferase [Streptococcus suis 05ZYH33]
gi|146320259|ref|YP_001199970.1| methionyl-tRNA formyltransferase [Streptococcus suis 98HAH33]
gi|253751273|ref|YP_003024414.1| methionyl-tRNA formyltransferase [Streptococcus suis SC84]
gi|253753174|ref|YP_003026314.1| methionyl-tRNA formyltransferase [Streptococcus suis P1/7]
gi|253754997|ref|YP_003028137.1| methionyl-tRNA formyltransferase [Streptococcus suis BM407]
gi|166215519|sp|A4VZN1|FMT_STRS2 RecName: Full=Methionyl-tRNA formyltransferase
gi|166215521|sp|A4VTF3|FMT_STRSY RecName: Full=Methionyl-tRNA formyltransferase
gi|145688886|gb|ABP89392.1| Methionyl-tRNA formyltransferase [Streptococcus suis 05ZYH33]
gi|145691065|gb|ABP91570.1| Methionyl-tRNA formyltransferase [Streptococcus suis 98HAH33]
gi|251815562|emb|CAZ51145.1| methionyl-tRNA formyltransferase [Streptococcus suis SC84]
gi|251817461|emb|CAZ55202.1| methionyl-tRNA formyltransferase [Streptococcus suis BM407]
gi|251819419|emb|CAR44890.1| methionyl-tRNA formyltransferase [Streptococcus suis P1/7]
gi|292557842|gb|ADE30843.1| Methionyl-tRNA formyltransferase [Streptococcus suis GZ1]
gi|319757553|gb|ADV69495.1| methionyl-tRNA formyltransferase [Streptococcus suis JS14]
Length = 312
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 94/316 (29%), Positives = 152/316 (48%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT F+ L+ L++ ++I++V TQP R G R ++ V + A E++
Sbjct: 1 MT-KLIFMGTPAFSATVLRGLLADGNYNILAVVTQPDRAVG-RKKVIQMTPVKEVALEYN 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + L +V A L + N HASLLP++RG
Sbjct: 59 LPVYQPEKLSGSQEMDELMNLGADGIVTAAFGQFLPTKLLNSVDFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD G+ IM+M K +D G + + I + N L ++L+V+ ++
Sbjct: 119 APIHYALINGDERAGVTIMEMVKEMDAGDMISSDSIAIEESDNVGTLFEKLAVVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + +L Q +T++ I E +++ ++A + N IR + P+P A
Sbjct: 179 QTLPAYIAGDLKPVAQNPEQVTFSPNIQPEEEVLDWNKTARQLFNQIRGMYPWPVAHT-- 236
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER K+ E+ EGEG G VI IA QGA+ + +Q AG + I D
Sbjct: 237 --YWQGERFKIQEAVEAEGEGSVGRVIARSKKELIIATGQGALSLKTVQPAGKPKMTIAD 294
Query: 297 FLLGCP--VIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGAGRDIAVGDQFG 310
>gi|312882738|ref|ZP_07742473.1| methionyl-tRNA formyltransferase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369596|gb|EFP97113.1| methionyl-tRNA formyltransferase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 315
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 107/304 (35%), Positives = 167/304 (54%), Gaps = 11/304 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT +FA L AL+SS H I++ YT+P PAG RG K S V + A E ++
Sbjct: 4 PLRIVFAGTPDFAACHLAALLSSEHEIIAAYTKPDSPAG-RGKKLTESPVKQMALEHNIA 62
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E Q NAD+ VVVAYGL++PQ +L+ +LG N H S+LPRWRGAA
Sbjct: 63 VFQPQNFKSEHTIQELTDLNADIMVVVAYGLLLPQSVLDTPRLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + PI S +A + ++L+ L A+++
Sbjct: 123 PIQRSIWAGDKETGVTIMQMDIGLDTGDMLEIATTPIESQDTSASMYEKLAGLGPQALID 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q Q + YA+K+SK E ++N+ +A ++ +RA +P+P + +
Sbjct: 183 CLSNIAQGKAIPQRQDDKLANYAQKLSKEEAKINWSDAAVHIERCVRAFNPWPISHFFIA 242
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ IK+ +S++ + +PG +I + + + +Q G + + +
Sbjct: 243 D----KPIKVWKSRVEKQNVDHQPGHIIRADKTGIYVTTGDQVLVLEHIQLPGKKAMPVA 298
Query: 296 DFLL 299
D L
Sbjct: 299 DVLN 302
>gi|121606765|ref|YP_984094.1| methionyl-tRNA formyltransferase [Polaromonas naphthalenivorans
CJ2]
gi|166215496|sp|A1VU45|FMT_POLNA RecName: Full=Methionyl-tRNA formyltransferase
gi|120595734|gb|ABM39173.1| methionyl-tRNA formyltransferase [Polaromonas naphthalenivorans
CJ2]
Length = 323
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 120/323 (37%), Positives = 171/323 (52%), Gaps = 21/323 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT EFA L L + I V TQP RPAG RG+K SAV + A+ ++
Sbjct: 1 MRVIFAGTPEFARVALAQLHGAGFEIPLVLTQPDRPAG-RGMKLQASAVKQWAESHAIAV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ + ADV VV AYGL++PQ +L+ +LG N HASLL
Sbjct: 60 AQPRSLRLDGKYPEDAAAARAAIEAAQADVMVVAAYGLILPQWVLDMPRLGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RAI AGD +TG+ IM+MD LDTG + + K+ I + TA L +L+ L
Sbjct: 120 PRWRGAAPIHRAIQAGDPQTGVTIMQMDAGLDTGDMLLVEKLAIQATDTTATLHDKLAAL 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+V+A++ L Q G+TYA KI K E V++ + ++ HIRA++PFP
Sbjct: 180 GGQMIVQALELAAAGQLEPVRQPAEGVTYAHKIEKSEAAVDWTQPVASIDRHIRAMTPFP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKP----GEVIN---PNFTIACSQGAVRIMRLQR 286
GA ++ +KL S++ P G +++ +AC G +++ LQR
Sbjct: 240 GASAQIGSD----TVKLWSSEIDSCSCPPDMRKGLILSANSDGVRVACGDGVLKVTELQR 295
Query: 287 AGGRVLDIGDFLLGCPVIIGCIV 309
AGG+ L DFL G + G +
Sbjct: 296 AGGKRLPAADFLRGFDLQAGQLF 318
>gi|284051858|ref|ZP_06382068.1| methionyl-tRNA formyltransferase [Arthrospira platensis str.
Paraca]
Length = 327
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 102/327 (31%), Positives = 154/327 (47%), Gaps = 21/327 (6%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT EFAV +LQ L+ +V V TQP + G RG K+ S V A LP
Sbjct: 1 MRLVFFGTPEFAVPSLQRLLTDEQFQVVGVVTQPDKRRG-RGSKTSPSPVKAIAMGAGLP 59
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ ++ ADV VVVAYG ++ +L KLG N H S+LP++RGA
Sbjct: 60 VWQPRRIKKDPQTLANLREVEADVFVVVAYGQILSLELLQIPKLGCVNAHGSILPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ + G+ ETGI M MD+ +DTGP+ PIS A L + L+ + A +
Sbjct: 120 APIQWCLYHGETETGITTMLMDEGMDTGPMLLKSYTPISWEDQAANLAERLAHMAAELLT 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL-- 237
E + ++ + PQ + A I + ++++ +SA +HN IRA P
Sbjct: 180 ETLLQMRSQTIQAIPQDHTQSSAAPLIKPQDYQLDWSKSAPALHNQIRAFYPHCVTNFRG 239
Query: 238 -EMMIGNKHERIKLLESQLVE----------GEGKPGEVI----NPNFTIACSQGAVRIM 282
+ I + +++L GK GE++ + G + I
Sbjct: 240 ETLKISGSVPLGYVPQTELPPPLARLSTADINPGKIGEIVAIAKRFGPIVQTGSGYLLIS 299
Query: 283 RLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+++ G RV DF+ G V IG I+
Sbjct: 300 QVKLPGKRVQSGWDFVNGTRVAIGEIL 326
>gi|325297460|ref|YP_004257377.1| Methionyl-tRNA formyltransferase [Bacteroides salanitronis DSM
18170]
gi|324317013|gb|ADY34904.1| Methionyl-tRNA formyltransferase [Bacteroides salanitronis DSM
18170]
Length = 323
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 98/310 (31%), Positives = 160/310 (51%), Gaps = 10/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+V+MGT EFAV +L+ LV +++V V T P +P GR G S V + A L
Sbjct: 6 LRIVYMGTPEFAVESLKRLVEGGYNVVGVITMPDKPMGRHGSVLQPSPVKEYAVSQGLKI 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E + + L +V ++P+ + +LG +N HASLLP++RGAAPI
Sbjct: 66 LQPEKLKDERFLEELRALQADLQIVVAFRMLPEVVWRMPRLGTFNLHASLLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ ETGI + +DTG + +VPI+ N + L +L +++ +
Sbjct: 126 NWAVINGETETGITTFFLKHEIDTGEIIDQVRVPIADTDNVGVVYDRLMMLGGDLVLKTV 185
Query: 183 DKLEQNNLPLSPQIE----NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
D + N+ PQ + A KI K R+++ + + V++ IR LSP+P AW E
Sbjct: 186 DAILAGNVRTIPQETLSSAGVLHPAPKIFKDMCRIDWTKGVKPVYDFIRGLSPYPAAWTE 245
Query: 239 MMIGNK-HERIKLLES--QLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVL 292
+ + +K+ E+ + E PG ++ F +A + G V ++ +Q AG + +
Sbjct: 246 LCEPDSAPVVMKIYETGKEFAEHALAPGTIVTDKKTYFKVASTDGFVHLLSIQFAGKKRM 305
Query: 293 DIGDFLLGCP 302
++ DFL G
Sbjct: 306 NVADFLRGYR 315
>gi|282860062|ref|ZP_06269143.1| methionyl-tRNA formyltransferase [Prevotella bivia JCVIHMP010]
gi|282587150|gb|EFB92374.1| methionyl-tRNA formyltransferase [Prevotella bivia JCVIHMP010]
Length = 337
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 92/324 (28%), Positives = 161/324 (49%), Gaps = 24/324 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT EFAV +L+ALV +++++V+V TQP +P GR + V + A +LP
Sbjct: 6 LRIVFMGTPEFAVESLKALVENNYNVVAVITQPDKPVGRHQEQLQAPPVKQYALAHNLPV 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P K+ E+ L+ VV ++P+ + + + G +N HA+LLP++RGAAPI
Sbjct: 66 LQPEKMKNPEFHAALAAYKADLQVVVAFRMLPKVVWDMPRFGTFNVHAALLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ +TG+ +DK +DTG + + PI + + + L L A ++ +
Sbjct: 126 NWAIINGETKTGVTTFFLDKDIDTGKIILQHEFPIPDDADVEYVYDGLMCLGADLAMKTI 185
Query: 183 DKLEQNNLPLS------------PQIE-NGITYAEKISKGETRVNFCRSAENVHNHIRAL 229
D + + Q E T A KI K +N+ + A+ V++ +R L
Sbjct: 186 DLICETIPDSDTDFKTVLDKISIEQNEAEATTQAPKIFKETCEINWNQPAKKVYDFVRGL 245
Query: 230 SPFPGAWLEMMI-------GNKHERIKLLESQLVEGEGK--PGE--VINPNFTIACSQGA 278
SP+PG W +M + + +K+ + E + PG V + + +
Sbjct: 246 SPYPGTWTKMQLIDTTAAQPKQPMIMKVFRTHKTEIKATRVPGSLVVEKSHLYVNTADFM 305
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCP 302
+ ++ +Q +G + +++ FL G
Sbjct: 306 LELLDVQISGKKRMEVKAFLNGFQ 329
>gi|261206662|ref|ZP_05921360.1| methionyl-tRNA formyltransferase [Enterococcus faecium TC 6]
gi|289565023|ref|ZP_06445477.1| methionyl-tRNA formyltransferase [Enterococcus faecium D344SRF]
gi|260079155|gb|EEW66848.1| methionyl-tRNA formyltransferase [Enterococcus faecium TC 6]
gi|289163230|gb|EFD11076.1| methionyl-tRNA formyltransferase [Enterococcus faecium D344SRF]
Length = 312
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 164/308 (53%), Gaps = 14/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L+ L+ S + I +V TQP RP G R + V + A + +
Sbjct: 1 MT-KLVFMGTPAFSVPILEGLIESGYEIQAVVTQPDRPVG-RKRVITPTPVKEAALKHGI 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + DV V A+G +P+++L KLG N HASLLP++RG
Sbjct: 59 RVLQPEKISGSPEMEEIIELAPDVIVTAAFGQFLPEKLLQVPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ AIM G+ ETG+ IM+M K +D G + +PI+ + + ++LS+L ++
Sbjct: 119 APVHYAIMNGEKETGVTIMEMIKKMDVGGIYAQESIPITKQDDVGTMFEKLSLLGRKLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ E+ T++ I++ + +++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPNIL-DGQKPVPQDESEATFSPNITREQEAIDWHKTAEEIDNQVRGMRPWPIAFTTY 237
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLD 293
R KLL +++E + PG +I N IAC Q + I LQ AG
Sbjct: 238 EG----IRWKLLSVEVLEETTDKAPGTIIRKDKKNLWIACGKQTVLAINELQPAGKGKQA 293
Query: 294 IGDFLLGC 301
+ DFL G
Sbjct: 294 VHDFLNGS 301
>gi|218261697|ref|ZP_03476432.1| hypothetical protein PRABACTJOHN_02100 [Parabacteroides johnsonii
DSM 18315]
gi|218223850|gb|EEC96500.1| hypothetical protein PRABACTJOHN_02100 [Parabacteroides johnsonii
DSM 18315]
Length = 324
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 102/321 (31%), Positives = 161/321 (50%), Gaps = 15/321 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV +L+ALV ++IV V T P +P GR G S V + A
Sbjct: 1 MKKEDLRIVYMGTPDFAVESLRALVEGGYNIVGVITMPDKPVGRHGSVLQASPVKQYAVS 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P KL E + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 61 KELPVLQPEKLKDEAFLSELRALKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETG + +DTG + + +PI+ + + L + A
Sbjct: 121 GAAPINWAVINGDTETGATTFFLTHEIDTGKIIRQKHLPIADTDDVGIVHDSLMTMGAGL 180
Query: 178 MVEAMDKLEQNNLPLSPQ-----IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
++E +D L + PQ + + A KI K R+++ + + +++ IR LSP+
Sbjct: 181 VLETVDLLLEGKADAVPQEEFYKDPSELRPAPKIFKETCRIDWHQPVKRIYDFIRGLSPY 240
Query: 233 PGAWLEMMIG-NKHERIKLLESQL--VEGEGKPGEVINPN---FTIACSQGAVRIMRLQR 286
P AW E++ +K+ +++ V E G V +A G +R++ +Q
Sbjct: 241 PAAWTEIVSPEGVRTTLKIYQAEKLFVAHELPVGTVRTDRKSYIDVAVEDGYLRLLSIQL 300
Query: 287 AGGRVLDIGDFLLGCPVIIGC 307
AG + L + DFL G IG
Sbjct: 301 AGKKRLPVADFLNGFK-QIGE 320
>gi|293553675|ref|ZP_06674299.1| methionyl-tRNA formyltransferase [Enterococcus faecium E1039]
gi|294614917|ref|ZP_06694808.1| methionyl-tRNA formyltransferase [Enterococcus faecium E1636]
gi|291592203|gb|EFF23821.1| methionyl-tRNA formyltransferase [Enterococcus faecium E1636]
gi|291602250|gb|EFF32478.1| methionyl-tRNA formyltransferase [Enterococcus faecium E1039]
Length = 312
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 164/308 (53%), Gaps = 14/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L+ L+ S + I +V TQP RP G R + V + A + +
Sbjct: 1 MT-KLVFMGTPAFSVPILEGLIESGYEIQAVVTQPDRPVG-RKRVITPTPVKEAALKHGI 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + DV V A+G +P+++L KLG N HASLLP++RG
Sbjct: 59 RVLQPEKISGSPEMEEIIELAPDVIVTAAFGQFLPEKLLQVPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ AIM G+ ETG+ IM+M K +D G + +PI+ + + ++LS+L ++
Sbjct: 119 APVHYAIMNGEKETGVTIMEMIKKMDAGGIYAQESIPITKQDDVGTMFEKLSLLGRKLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ E+ T++ I++ + +++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPNIL-DGQKPVPQDESEATFSPNITREQEAIDWHKTAEEIDNQVRGMRPWPIAFTTY 237
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLD 293
R KLL +++E + PG +I N IAC Q + I LQ AG
Sbjct: 238 EG----IRWKLLSVEVLEETTDKAPGTIIRKDKKNLWIACGKQTVLAINELQPAGKGKQA 293
Query: 294 IGDFLLGC 301
+ DFL G
Sbjct: 294 VHDFLNGS 301
>gi|315583678|pdb|3Q0I|A Chain A, Methionyl-Trna Formyltransferase From Vibrio Cholerae
Length = 318
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 115/314 (36%), Positives = 171/314 (54%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H I++VYTQP RPAG RG K S V A E ++P
Sbjct: 7 SLRIVFAGTPDFAARHLAALLSSEHEIIAVYTQPERPAG-RGKKLTASPVKTLALEHNVP 65
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 66 VYQPENFKSDESKQQLAALNADLXVVVAYGLLLPKVVLDTPKLGCINVHGSILPRWRGAA 125
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD+ETG+ I + D LDTG + +PI ++ +A +L+ L A++E
Sbjct: 126 PIQRSIWAGDSETGVTIXQXDVGLDTGDXLKIATLPIEASDTSASXYDKLAELGPQALLE 185
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q Q + YA K+SK E R+N+ +A ++ IRA +P+P + E+
Sbjct: 186 CLQDIAQGTAVAVKQDDGLANYAHKLSKEEARINWSDAATHIERCIRAFNPWPXSHFEVA 245
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +E++ V PG +I +A Q + + LQ G + L + D
Sbjct: 246 ENSIKVWQARVETRAV--TQTPGTIIQADKSGIYVATGQDVLVLESLQIPGKKALPVQDI 303
Query: 298 LLGCP--VIIGCIV 309
L +G +
Sbjct: 304 LNARADWFSVGSQL 317
>gi|260574967|ref|ZP_05842969.1| methionyl-tRNA formyltransferase [Rhodobacter sp. SW2]
gi|259022972|gb|EEW26266.1| methionyl-tRNA formyltransferase [Rhodobacter sp. SW2]
Length = 302
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 138/303 (45%), Positives = 185/303 (61%), Gaps = 6/303 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT EF+V L+AL S+ H +V VYTQPPRPAG RG + S V +A+ LP
Sbjct: 1 MKIVFMGTPEFSVPVLEALASA-HQVVCVYTQPPRPAG-RGQQPRPSPVQARAESLGLPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E +F + +AD+AVVVAYGL++PQ +L+A +LG N HASLLPRWRGAAP
Sbjct: 59 RHPVSLRNAEAQAEFAALDADIAVVVAYGLILPQAVLDAPRLGCLNIHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RA++AGD ETG+ IM+M+ LDTGPV + PI T L L+ L A +++A
Sbjct: 119 IHRAVLAGDGETGVCIMQMEAGLDTGPVLLRQATPIGPEDTTGALHDRLAALGAKLILQA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + +NLP PQ ++G+TYA KI K E R+++ A V HIR LSPFPGAW E+
Sbjct: 179 L--ADLSNLPPQPQPDDGVTYAAKIDKAEARIDWTLPAAEVDRHIRGLSPFPGAWCEVAG 236
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
L + G+G PG+V+ FT+AC GAV I + QR G R + L G
Sbjct: 237 ERIKLLGSRLAPRPAAGQGTPGQVL-GGFTVACGSGAVEITQAQRPGKRASAAAEILRGL 295
Query: 302 PVI 304
+
Sbjct: 296 ALP 298
>gi|167752152|ref|ZP_02424279.1| hypothetical protein ALIPUT_00394 [Alistipes putredinis DSM 17216]
gi|167660393|gb|EDS04523.1| hypothetical protein ALIPUT_00394 [Alistipes putredinis DSM 17216]
Length = 320
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 96/308 (31%), Positives = 159/308 (51%), Gaps = 9/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT EFAV +L+ALV S +++V V T P +PAG RG K S V A+E LP
Sbjct: 6 LRIVFMGTPEFAVPSLRALVRSGYNVVGVVTTPDKPAG-RGQKLHESDVKIAARELGLPI 64
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL + + +V ++P+ + +LG +N HASLLP++RGAAPI
Sbjct: 65 LQPEKLRDPAFVSTMEELRPDLGIVIAFRMLPEVVWAMPRLGTFNLHASLLPQYRGAAPI 124
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+++TG+ ++ +D G + ++PI N L L + A +V+ +
Sbjct: 125 NWAIINGESKTGVTTFLLNHEIDKGAILGQVEMPIQPEDNVGTLYDRLMTVGADLVVQTV 184
Query: 183 DKLEQNNLPLSPQIENGI--TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+++ + Q + A KI K + +++ +S + + + IR LSP+P AW ++
Sbjct: 185 ERIAAGEITPVVQSDEDTSLRPAPKIFKNDCLIDWTQSGKRIIDFIRGLSPYPAAWTRLL 244
Query: 241 IGNKHERI-KLLESQLVEG--EGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDI 294
+ K+ E++ G E G + N I C+ G + ++ LQ +G + +
Sbjct: 245 REEQEANSAKIFEARFEAGGPEAPCGTIDTDNRKYLRIRCADGWIDVLSLQLSGKKRMAA 304
Query: 295 GDFLLGCP 302
+ LLG
Sbjct: 305 QELLLGFR 312
>gi|291567194|dbj|BAI89466.1| methionyl-tRNA formyltransferase [Arthrospira platensis NIES-39]
Length = 327
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 102/327 (31%), Positives = 153/327 (46%), Gaps = 21/327 (6%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT EFAV +LQ L+ +V V TQP + G RG K+ S V A LP
Sbjct: 1 MRLVFFGTPEFAVPSLQRLLTDEQFQVVGVVTQPDKRRG-RGSKTSPSPVKAIAMGAGLP 59
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ ++ ADV VVVAYG ++ +L KLG N H S+LP++RGA
Sbjct: 60 VWQPRRIKKDPQTLANLREVEADVFVVVAYGQILSLELLQIPKLGCVNAHGSILPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ + G+ ETGI M MD+ +DTGP+ PIS A L + L+ + A +
Sbjct: 120 APIQWCLYHGETETGITTMLMDEGMDTGPMLLKSYTPISWEDQAANLAERLAHMAAELLT 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE- 238
E + ++ + PQ T A I + ++++ +SA +HN IRA P
Sbjct: 180 ETLLQMRSQTIQPIPQDHTQATLAPLIKPEDYQLDWSKSAPALHNQIRAFYPHCVTTFRG 239
Query: 239 --MMIGNKHERIKLLESQLVE----------GEGKPGEVI----NPNFTIACSQGAVRIM 282
+ I + +++L GK GE++ + G + +
Sbjct: 240 QSLKISGSVPLGSVPQTELPPPLARLSTADINPGKIGEIVAIAKRFGPIVQTGSGYLLVS 299
Query: 283 RLQRAGGRVLDIGDFLLGCPVIIGCIV 309
++ G RV DF+ G V IG I+
Sbjct: 300 EVKLPGKRVQSGWDFVNGTRVAIGEIL 326
>gi|110800003|ref|YP_695451.1| methionyl-tRNA formyltransferase [Clostridium perfringens ATCC
13124]
gi|110674650|gb|ABG83637.1| methionyl-tRNA formyltransferase [Clostridium perfringens ATCC
13124]
Length = 317
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 92/318 (28%), Positives = 161/318 (50%), Gaps = 13/318 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV +L+ ++ ++ ++ TQP +P+G RG K +S + + +P
Sbjct: 1 MKIVFMGTPDFAVPSLKKMIE-KFNVSAIITQPDKPSG-RGKKLTISPIKEVGLSNEIPI 58
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ + D +VVAYG ++ + IL+ +LG HASLLP +RG+A
Sbjct: 59 FQPEKIRTDSVIINKLKELKPDFIIVVAYGQILTKEILDIPRLGCICLHASLLPMYRGSA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI ++ G+ +TG + MD +DTG + +V IS ++ L L + A + E
Sbjct: 119 PINWCLINGEIKTGNTTILMDTSIDTGDMLMRSEVEISESMTAGELYNLLKINGAELLEE 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA----W 236
++ + + Q +G +Y + ++K +N+ S+ N+HN IR LS +P W
Sbjct: 179 TINGIIAGKICGIKQPNDGSSYVKMLNKQMANINWNDSSTNIHNLIRGLSSWPYKNINSW 238
Query: 237 LEMMIGNKHERIKLLESQLVEGE--GKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRV 291
K +K+ +S+ +E PG +I+ +A G + I LQ GG+
Sbjct: 239 PTAYTYYKDIPVKIFKSKSLEANIIDPPGYIIDANDEGIKVATKNGILIIEILQFPGGKP 298
Query: 292 LDIGDFLLGCPVIIGCIV 309
L++ +FL G + G I+
Sbjct: 299 LEVKEFLKGNKIEKGIIL 316
>gi|120613321|ref|YP_972999.1| methionyl-tRNA formyltransferase [Acidovorax citrulli AAC00-1]
gi|166214865|sp|A1TW87|FMT_ACIAC RecName: Full=Methionyl-tRNA formyltransferase
gi|120591785|gb|ABM35225.1| methionyl-tRNA formyltransferase [Acidovorax citrulli AAC00-1]
Length = 329
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 122/329 (37%), Positives = 174/329 (52%), Gaps = 26/329 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L+ L+++ + V TQP RPAG RG+K S V + A +
Sbjct: 1 MKIIFAGTPEFARVALERLLAAGAEVPLVLTQPDRPAG-RGMKLQASPVKQCALAHGIAV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ + AD VV AYGL++PQ +L+ +LG N HASLL
Sbjct: 60 AQPRGLRLDGRYAEDAAAARAALEAAGADAMVVAAYGLILPQWVLDLPRLGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RAI AGD ETG+ IM+MD LDTG + + K I+ TA L L+ L
Sbjct: 120 PRWRGAAPIHRAIEAGDAETGVTIMQMDAGLDTGAMLLIEKTAIAPRETTATLHDRLADL 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+VEAM+ L +PQ G+TYA KI K E+ +++ A + +RA PFP
Sbjct: 180 GGRLIVEAMELAACGGLAATPQPAEGVTYAHKIEKAESAIDWKLPAAAIDRRVRAFDPFP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVE----GEGKPGEVI---NPNFTIACSQ-----GAVRI 281
GA + E IK+ + ++ +PGE++ + +AC G +R+
Sbjct: 240 GASTQ----CSAETIKVWGCEPLQVPPPEGAQPGEILQVDDAGVDVACGGPDGAAGVLRL 295
Query: 282 MRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
LQRAGG+ L +GDFL G P+ G ++G
Sbjct: 296 TVLQRAGGKRLPVGDFLRGHPLAPGMVLG 324
>gi|294012441|ref|YP_003545901.1| methionyl-tRNA formyltransferase [Sphingobium japonicum UT26S]
gi|292675771|dbj|BAI97289.1| methionyl-tRNA formyltransferase [Sphingobium japonicum UT26S]
Length = 302
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 128/307 (41%), Positives = 172/307 (56%), Gaps = 9/307 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+V+MGT +FAV L AL + H IV+ Y+QPPRPAG RG S VH KA+E +
Sbjct: 1 MRIVYMGTPDFAVPALVALAKAGHGIVAAYSQPPRPAG-RGKALRPSPVHAKAEEMGIEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + F + NADVAVV AYGL++P+ IL A +LG N HASLLPRWRGAAP
Sbjct: 60 RTPVSLKDADVQAAFAALNADVAVVAAYGLILPRPILYAPRLGCMNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+AGDN TG+ IM M+ LDTGP+ PI A ++ +
Sbjct: 120 IQRAILAGDNVTGVTIMDMEAGLDTGPMRAKHVTPIEDKTAGALTRELADAGAELMVEVL 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
D P Q E G+TYA KI K E+R++F R A V +RA +P PGA+ E
Sbjct: 180 DDIALH---PPVAQPEEGVTYASKIEKAESRIDFGRDAHQVERQVRAFNPVPGAFFEY-- 234
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+ ER ++L + + EG GE+++ + I C G++R +QRAG + G+ L G
Sbjct: 235 --RGERFRILAAHVEGDEGPAGELLDNSLLIGCGHGSIRPTLIQRAGKGAMSAGELLRGY 292
Query: 302 PVIIGCI 308
+ G
Sbjct: 293 EMPAGSR 299
>gi|255974265|ref|ZP_05424851.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T2]
gi|255967137|gb|EET97759.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T2]
Length = 314
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 101/307 (32%), Positives = 167/307 (54%), Gaps = 12/307 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M ++VFMGT F+V L++L+ + + + +V TQP RP G R + V + A + +L
Sbjct: 1 MMTKIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVG-RKKVITPTPVKEAALKHNL 59
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + D+ V A+G +P++IL A KLG N HASLLP++RG
Sbjct: 60 LVLQPEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGG 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ +I+ G+ ETG+ IM+M K +D G + R +PI+ + + ++LS+L ++
Sbjct: 120 APVHYSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + PQ+E T++ I++ + R+++ ++AE + N +R + P+P A+
Sbjct: 180 ETLPKLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWPTAFTTY 239
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N K+ + PG +I IAC +G ++I RLQ AG L
Sbjct: 240 QGTNW----KIWAVTPLTETTTSAPGTIIQRSKKALWIACGEGTVLQIDRLQPAGKGQLT 295
Query: 294 IGDFLLG 300
I +FL G
Sbjct: 296 IQEFLNG 302
>gi|328881117|emb|CCA54356.1| Methionyl-tRNA formyltransferase [Streptomyces venezuelae ATCC
10712]
Length = 310
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 103/314 (32%), Positives = 159/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MKLVFAGTPEVAVPALDALLASGRHEVAAVVTRPDAPAG-RGRRLVASPVAQRAEEAGIE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + E++ + D VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 60 VLKPARPRDEDFLARLREIAPDCCPVVAYGALLPKVALDIPARGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q ++MAGD TG + +++ LD+GPV + I + L L+ A +
Sbjct: 120 PVQHSLMAGDQVTGASTFLIEEGLDSGPVYGVVTEDIRPTDTSGDLLTRLAFAGAGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ GIT A KI + +V+F A V +R +P PGAW
Sbjct: 180 TMDGIEDGTLKAVPQPIEGITLAPKIQVEDAQVDFAAPALRVDRVVRGCTPAPGAWTLF- 238
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+KL++ + + PGE+ N AV ++ +Q G + + D
Sbjct: 239 ---RGERLKLIQVTPLPDRTDLAPGELAAGKNNVYAGTGSYAVELLWVQPQGKKPMKAAD 295
Query: 297 FLLGCPVIIGCIVG 310
+ G + G ++G
Sbjct: 296 WARGVRIAPGELLG 309
>gi|312953218|ref|ZP_07772064.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0102]
gi|310628835|gb|EFQ12118.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0102]
gi|315152787|gb|EFT96803.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0031]
gi|315159378|gb|EFU03395.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0312]
Length = 313
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 101/307 (32%), Positives = 168/307 (54%), Gaps = 13/307 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L++L+ + + + +V TQP RP G R + V + A + ++
Sbjct: 1 MT-KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVG-RKKVITPTPVKEAALKHNI 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + D+ V A+G +P++IL A KLG N HASLLP++RG
Sbjct: 59 LVLQPEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ +I+ G+ ETG+ IM+M K +D G + R +PI+ + + ++LS+L ++
Sbjct: 119 APVHYSIIEGEKETGVTIMEMVKKMDAGAILAQRAIPITKQDDVGTMFEKLSILGKELLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + PQ+E T++ I++ + R+++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPKLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWPTAFTTY 238
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N K+ + PG +I IAC +G ++I RLQ AG L
Sbjct: 239 QGTNW----KIWAVTPLTETTTSAPGTIIQRSKKALWIACGEGTVLQIDRLQPAGKGQLT 294
Query: 294 IGDFLLG 300
I +FL G
Sbjct: 295 IQEFLNG 301
>gi|84619222|emb|CAJ42346.1| putative methionyl-tRNA formyltransferase [Streptomyces
steffisburgensis]
Length = 310
Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats.
Identities = 96/312 (30%), Positives = 153/312 (49%), Gaps = 7/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MKLVFAGTPEVAVPALDALLASGRHEVAAVVTRPDAPAG-RGRRLVASPVAERAEEAGIE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K E+ E+ D VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 60 VLKPAKPKDPEFLERLREIGPDCCPVVAYGALLPRVALDVPAHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AIMAGD TG + +++ LD+GPV I + + L L+ A +
Sbjct: 120 PVQHAIMAGDQITGASTFLIEEGLDSGPVYGTVTEEIRATDTSGDLLTRLAFAGAGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ G++ A K++ + V++ A V +R +P PGAW
Sbjct: 180 TMDGIEDGTLKAVPQPAEGVSLAPKVNVEDAHVDWNAPALRVDRLVRGCTPAPGAWTTF- 238
Query: 241 IGNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ ++ + + + PG++ N + V ++ +Q G + + D+
Sbjct: 239 -RGERLKLIQVAAVPDRTDLAPGQIAAQKNNVYVGTGSYGVELLWVQAQGKKPMRAADWA 297
Query: 299 LGCPVIIGCIVG 310
G + +G
Sbjct: 298 RGVRIAEEERLG 309
>gi|326319404|ref|YP_004237076.1| methionyl-tRNA formyltransferase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376240|gb|ADX48509.1| methionyl-tRNA formyltransferase [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 329
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 121/325 (37%), Positives = 172/325 (52%), Gaps = 18/325 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L+ L+++ + V TQP RPAG RG+K S V + A +
Sbjct: 1 MKIIFAGTPEFARVALERLLAAGAEVPLVLTQPDRPAG-RGMKLQASPVKQCALAHGVAV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ + AD VV AYGL++PQ +L+ +LG N HASLL
Sbjct: 60 AQPRGLRLDGKYAEDAAAARAALEAAGADAMVVAAYGLILPQWVLDLPRLGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RAI AGD ETG+ IM+MD LDTG + + + PI++ TA L L+ L
Sbjct: 120 PRWRGAAPIHRAIEAGDAETGVTIMQMDAGLDTGAMLLVERTPIAARETTATLHDRLAEL 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+VEAM+ LP +PQ G+TYA KI K E+ +++ SA + +RA PFP
Sbjct: 180 GGRLIVEAMELAACGGLPATPQPAEGVTYAHKIEKAESAIDWKLSAAAIDRRVRAFDPFP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACS-----QGAVRIMRLQ 285
GA + + +PGE++ +AC G +R+ LQ
Sbjct: 240 GASTQCGAETIKVWGCEPLQAVAPDGARPGEILQVDEAGVAVACGGPGAADGVLRLTVLQ 299
Query: 286 RAGGRVLDIGDFLLGCPVIIGCIVG 310
RAGG+ L +GDFL G P++ G ++G
Sbjct: 300 RAGGKRLPVGDFLRGHPLVPGMVLG 324
>gi|254504234|ref|ZP_05116385.1| methionyl-tRNA formyltransferase [Labrenzia alexandrii DFL-11]
gi|222440305|gb|EEE46984.1| methionyl-tRNA formyltransferase [Labrenzia alexandrii DFL-11]
Length = 305
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 148/302 (49%), Positives = 195/302 (64%), Gaps = 4/302 (1%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +F+V TL +V H +V+ Y+QPPRPAG RG+ S VH+ A+ F +P PT
Sbjct: 1 MGTPDFSVPTLMEIVGQGHEVVACYSQPPRPAG-RGMDLKKSPVHEAAESFGIPVFTPTS 59
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
E+ QF + +ADVAVVVAYGL++P+ IL A + G N HAS+LPRWRGAAPI RAI
Sbjct: 60 LKSPEDQAQFAALDADVAVVVAYGLLLPKAILEAPEQGCLNLHASMLPRWRGAAPINRAI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
MAGD ET + +M+M++ LDTGPV + IS N+ L +LS L MV A+ L
Sbjct: 120 MAGDKETAVQVMRMEEGLDTGPVCMSETLAISENMTAGELHDQLSSLGGDLMVRALAALS 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
++ L Q E G+TYA K+SK ETR+ + SAENVHNHIR LSPFPGAW EM +G K E
Sbjct: 180 RSALGEQLQSEEGVTYAAKLSKQETRIEWSLSAENVHNHIRGLSPFPGAWCEMELGGKTE 239
Query: 247 RIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVI 304
R+K+L S L +G G G V+ + +AC AVR+ ++QRAG + + DFL G +
Sbjct: 240 RVKILRSSLADGNGDAGSVLAVDGAPVVACGANAVRLDQVQRAGKKPMTGEDFLRGAALS 299
Query: 305 IG 306
+G
Sbjct: 300 VG 301
>gi|323479051|gb|ADX78490.1| methionyl-tRNA formyltransferase [Enterococcus faecalis 62]
Length = 313
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 101/307 (32%), Positives = 168/307 (54%), Gaps = 13/307 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L++L+ + + + +V TQP RP G R + V + A + ++
Sbjct: 1 MT-KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVG-RKKVITPTPVKEAALKHNI 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + D+ V A+G +P++IL A KLG N HASLLP++RG
Sbjct: 59 LVLQPEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ +I+ G+ ETG+ IM+M K +D G + R +PI+ + + ++LS+L ++
Sbjct: 119 APVHYSIIEGEKETGVTIMEMVKKMDAGAILAQRAIPITKQDDVGTMFEKLSILGKELLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + PQ+E T++ I++ + R+++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPKLIAGEITPIPQVEEEATFSPNITREQERIDWKKTAEAIDNQVRGMRPWPTAFTTY 238
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N K+ + PG +I IAC +G ++I RLQ AG L
Sbjct: 239 QGTNW----KIWAVTPLTETTTSAPGTIIQRSKKALWIACGEGTVLQIDRLQPAGKGQLT 294
Query: 294 IGDFLLG 300
I +FL G
Sbjct: 295 IQEFLNG 301
>gi|29833419|ref|NP_828053.1| methionyl-tRNA formyltransferase [Streptomyces avermitilis MA-4680]
gi|33516852|sp|Q827P7|FMT_STRAW RecName: Full=Methionyl-tRNA formyltransferase
gi|29610542|dbj|BAC74588.1| putative methionyl-tRNA formyltransferase [Streptomyces avermitilis
MA-4680]
Length = 310
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 106/314 (33%), Positives = 158/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MKLVFAGTPEVAVPALDALIASGRHEVAAVVTRPDAPAG-RGRRLVASPVAQRAEEAGIE 59
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K EE+ D VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 60 VLKPVKPRDEEFLARLREIAPDCCPVVAYGALLPRVALDIPAHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q +IMAGD TG + +++ LD+GPV I + L L+ + +V
Sbjct: 120 PVQHSIMAGDEITGASTFLIEEGLDSGPVFGTVTEEIRPTDTSGDLLTRLAFAGSGLLVA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E+ L PQ +GIT A KI+ V++ A V +R +P PGAW
Sbjct: 180 TMDGVEEGKLKAVPQPADGITLAPKITVENAHVDWSTPALRVDRVVRGCTPAPGAWTVF- 238
Query: 241 IGNKHERIKLLESQLVE--GEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+KL++ V + PG V N + AV ++ +Q G + + D
Sbjct: 239 ---RGERLKLIQVVPVPERTDLAPGALSVGKNNVYVGTGSYAVELLWVQAQGKKPMRAAD 295
Query: 297 FLLGCPVIIGCIVG 310
+ G + G +G
Sbjct: 296 WARGVRITDGEPLG 309
>gi|329736319|gb|EGG72591.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis
VCU028]
gi|329736654|gb|EGG72920.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis
VCU045]
Length = 312
Score = 171 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 110/317 (34%), Positives = 173/317 (54%), Gaps = 14/317 (4%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT+ +++FMGT +F+ L+ L+ + H +++V TQP RP G R V + A +
Sbjct: 1 MTMSKIIFMGTPDFSTKILEMLI-AEHEVIAVVTQPDRPVG-RKKVMTPPPVKRVATKHQ 58
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P K +E E LS +D+ V A+G ++P+ +LNA KLG N HASLLP++RG
Sbjct: 59 IPVYQPEKLKDSQELESLLSLESDLIVTAAFGQLLPESLLNAPKLGAINVHASLLPKYRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API +AI+ G+ ETGI IM M K LD G + + + I N + +LS L A +
Sbjct: 119 GAPIHQAIIDGEEETGITIMYMVKKLDAGNIISQQSIRIEEEDNVGTMHDKLSFLGAELL 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + + N PQ + T+A I + + RV++ SA+ +HNHIR LSP+P A+
Sbjct: 179 KKTLPSIIDNTNDSIPQDDALATFASNIRREDERVDWNMSAQAIHNHIRGLSPWPVAYTT 238
Query: 239 MMIGNKHERIKLLESQLVEGE-GKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLD 293
M N +KL + +V+G+ G PG +I IA A+ + +Q AG + +
Sbjct: 239 MNEKN----LKLFSAFIVKGKKGNPGTIIETTKHELIIATGSDDAIALTEIQPAGKKRMK 294
Query: 294 IGDFLLGCPVI-IGCIV 309
+ D+L G +G ++
Sbjct: 295 VTDYLSGVQESLVGKVL 311
>gi|257899949|ref|ZP_05679602.1| methionyl-tRNA formyltransferase [Enterococcus faecium Com15]
gi|293572653|ref|ZP_06683621.1| methionyl-tRNA formyltransferase [Enterococcus faecium E980]
gi|257837861|gb|EEV62935.1| methionyl-tRNA formyltransferase [Enterococcus faecium Com15]
gi|291607239|gb|EFF36593.1| methionyl-tRNA formyltransferase [Enterococcus faecium E980]
Length = 312
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 163/308 (52%), Gaps = 14/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L+ L+ S + I +V TQP RP G R + V + A + +
Sbjct: 1 MT-KLVFMGTPAFSVPILEGLIESGYEIQAVVTQPDRPVG-RKRVITPTPVKEAALKHGI 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + D+ V A+G +P+++L KLG N HASLLP++RG
Sbjct: 59 RVLQPEKISGSPEMEEIIELAPDLIVTAAFGQFLPEKLLQVPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ AIM G+ ETG+ IM+M K +D G + +PI+ + + ++LS+L ++
Sbjct: 119 APVHYAIMNGEKETGVTIMEMIKKMDAGGIYAQESMPITKQDDVGTMFEKLSLLGRKLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + N PQ E+ T++ I++ + V++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPNIL-NGQKPVPQDESKATFSPNITREQEAVDWHKTAEEIDNQVRGMRPWPIAFTTY 237
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLD 293
R KLL +++ + PG +I N IAC Q + I LQ AG
Sbjct: 238 EGT----RWKLLSVEVLAESTDEAPGTIIRKDKKNLWIACGKQTVLAINELQPAGKGKQA 293
Query: 294 IGDFLLGC 301
+ DFL G
Sbjct: 294 VHDFLNGS 301
>gi|257888655|ref|ZP_05668308.1| methionyl-tRNA formyltransferase [Enterococcus faecium 1,141,733]
gi|257897389|ref|ZP_05677042.1| methionyl-tRNA formyltransferase [Enterococcus faecium Com12]
gi|293378851|ref|ZP_06625006.1| methionyl-tRNA formyltransferase [Enterococcus faecium PC4.1]
gi|257824709|gb|EEV51641.1| methionyl-tRNA formyltransferase [Enterococcus faecium 1,141,733]
gi|257833954|gb|EEV60375.1| methionyl-tRNA formyltransferase [Enterococcus faecium Com12]
gi|292642392|gb|EFF60547.1| methionyl-tRNA formyltransferase [Enterococcus faecium PC4.1]
Length = 312
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 163/308 (52%), Gaps = 14/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L+ L+ S + I +V TQP RP G R + V + A + +
Sbjct: 1 MT-KLVFMGTPAFSVPILEGLIESGYEIQAVVTQPDRPVG-RKRVITPTPVKEAALKHGI 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + D+ V A+G +P+++L KLG N HASLLP++RG
Sbjct: 59 RVLQPEKISGSPEMEEIIELAPDLIVTAAFGQFLPEKLLQVPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ AIM G+ ETG+ IM+M K +D G + +PI+ + + ++LS+L ++
Sbjct: 119 APVHYAIMNGEEETGVTIMEMIKKMDAGGIYAQESMPITKQDDVGTMFEKLSLLGRKLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + N PQ E+ T++ I++ + V++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPNIL-NGQKPVPQDESKATFSPNITREQEAVDWHKTAEEIDNQVRGMRPWPIAFTTY 237
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLD 293
R KLL +++ + PG +I N IAC Q + I LQ AG
Sbjct: 238 EGT----RWKLLSVEVLAESTDEAPGTIIRKDKKNLWIACGKQTVLAINELQPAGKGKQA 293
Query: 294 IGDFLLGC 301
+ DFL G
Sbjct: 294 VHDFLNGS 301
>gi|170724407|ref|YP_001758433.1| methionyl-tRNA formyltransferase [Shewanella woodyi ATCC 51908]
gi|238688634|sp|B1KCW3|FMT_SHEWM RecName: Full=Methionyl-tRNA formyltransferase
gi|169809754|gb|ACA84338.1| methionyl-tRNA formyltransferase [Shewanella woodyi ATCC 51908]
Length = 320
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 112/314 (35%), Positives = 170/314 (54%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L V+F GT +FA LQAL++S H++++VY++ +PAG RG K S V A E +P
Sbjct: 3 PLNVIFAGTPDFAARHLQALINSEHNVIAVYSRADKPAG-RGKKLQASPVKMLALENEIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
PT L E+ + L+ D+ VVVAYGL++P+ +L+ KLG N H S+LPRWRGAA
Sbjct: 62 VYQPTSLRDEQAQAELASLNADIMVVVAYGLILPKVVLDTPKLGCINVHGSILPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ +GD ETG+ IM+MD LDTG + ++PI + +A L ++L+ A+VE
Sbjct: 122 PIQRALWSGDTETGVTIMQMDIGLDTGDMLLKTQLPIEDSDTSASLYEKLAEQGPEALVE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L + L Q E YAEK+SK E +++ +SA + IRA +P+P +
Sbjct: 182 ALTGLAKGELAAEKQDEALANYAEKLSKEEAELDWNKSAAQLWREIRAFNPWPISHFSHQ 241
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R + + G +I IA G + ++ +Q G + L + D
Sbjct: 242 DASIKVRE--AHVSQSKSQAPAGTIISAGKEGIEIATGDGVLTLLNMQLPGKKPLSVADI 299
Query: 298 LLGCP--VIIGCIV 309
L G ++
Sbjct: 300 LNSRSEWFTPGTVL 313
>gi|330832247|ref|YP_004401072.1| methionyl-tRNA formyltransferase [Streptococcus suis ST3]
gi|329306470|gb|AEB80886.1| methionyl-tRNA formyltransferase [Streptococcus suis ST3]
Length = 312
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 95/316 (30%), Positives = 153/316 (48%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT F+ L+ L++ ++I++V TQP R G R ++ V + A E++
Sbjct: 1 MT-KLIFMGTPAFSAMVLRGLLADGNYNILAVVTQPDRAVG-RKKVIQMTPVKEVALEYN 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + L +V A L + N HASLLP++RG
Sbjct: 59 LPVYQPEKLSGSQEMDELMNLGADGIVTAAFGQFLPTKLLNSVDFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD G+ IM+M K +D G + + I + N L ++L+V+ ++
Sbjct: 119 APIHYALINGDKRAGVTIMEMVKEMDAGDMISSDSIAIEESDNVGTLFEKLAVVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + +L Q +T++ I E +++ ++A + NHIR + P+P A
Sbjct: 179 QTLPAYIAGDLKPVAQNPEQVTFSPNIQPEEEVLDWNKTARQLFNHIRGMYPWPVAHT-- 236
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER K+ E+ EGEG G VI IA QGA+ + +Q AG + I D
Sbjct: 237 --YWQGERFKIQEAVEAEGEGPVGRVIARSKKELIIATGQGALSLKTVQPAGKPKMTIAD 294
Query: 297 FLLGCP--VIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGAGRDIAVGDQFG 310
>gi|302023429|ref|ZP_07248640.1| methionyl-tRNA formyltransferase [Streptococcus suis 05HAS68]
Length = 312
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 95/316 (30%), Positives = 153/316 (48%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT F+ L+ L++ ++I++V TQP R G R ++ V + A E++
Sbjct: 1 MT-KLIFMGTPAFSAMVLRGLLADGNYNILAVVTQPDRAVG-RKKVIQMTPVKEVALEYN 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + L +V A L + N HASLLP++RG
Sbjct: 59 LPVYQPEKLSGSQEMDELMNLGADGIVTAAFGQFLPTKLLNSVDFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD G+ IM+M K +D G + + I + N L ++L+V+ ++
Sbjct: 119 APIHYALINGDERAGVTIMEMVKEMDAGDMISSDSIAIEESDNVGTLFEKLAVVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + +L Q +T++ I E +++ ++A + NHIR + P+P A
Sbjct: 179 QTLPAYIAGDLKPVAQNPEQVTFSPNIQPEEEVLDWNKTARQLFNHIRGMYPWPVAHT-- 236
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER K+ E+ EGEG G VI IA QGA+ + +Q AG + I D
Sbjct: 237 --YWQGERFKIQEAVEAEGEGPVGRVIARSKKELIIATGQGALSLKTVQPAGKPKMTIAD 294
Query: 297 FLLGCP--VIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGAGRDIAVGDQFG 310
>gi|304320577|ref|YP_003854220.1| methionyl-tRNA formyltransferase [Parvularcula bermudensis
HTCC2503]
gi|303299479|gb|ADM09078.1| methionyl-tRNA formyltransferase [Parvularcula bermudensis
HTCC2503]
Length = 319
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 130/319 (40%), Positives = 189/319 (59%), Gaps = 13/319 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT FAV L +L+++ H +++VY+QPPR +G RG + + VH+ A+ +
Sbjct: 1 MRIVFMGTPAFAVPALASLLAAGHEVIAVYSQPPRKSG-RGHRVQKTPVHQFAEPHGIEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + G E ++F+ NAD+ +VVAYGL++P L A + G N HASLLPRWRGAAP
Sbjct: 60 RTPDRLKGPTETQRFVDLNADLGIVVAYGLILPTAFLEAPRHGCLNLHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRAIMAGD TG+ +M+M+K LDTGP+ VPI ++ L L+ A + A
Sbjct: 120 VQRAIMAGDAMTGVQVMQMEKGLDTGPILLSETVPIGADQTAGQLTDILAQTGAELLPRA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L++ L +PQ ++G+TYAEKIS E V++ SA + HIR LSPFPGAW+ +
Sbjct: 180 LAALDRGGLQATPQSKSGVTYAEKISAAEAAVDWSGSARVLDRHIRGLSPFPGAWVMVHR 239
Query: 242 GNKHERIKLLESQLVE--------GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGR 290
G + R+KLL+S+LVE PG ++ +A QGA+ ++ LQR G
Sbjct: 240 GGEPIRLKLLDSRLVEGEGADGGAVGAAPGTILPAPEDRVRVATGQGALDLLLLQRPGKA 299
Query: 291 VLDIGDFLLGCPVIIGCIV 309
D F G + G +
Sbjct: 300 PQDAAAFRRGFALAPGDRL 318
>gi|298208490|ref|YP_003716669.1| methionyl-tRNA formyltransferase [Croceibacter atlanticus HTCC2559]
gi|83848413|gb|EAP86282.1| methionyl-tRNA formyltransferase [Croceibacter atlanticus HTCC2559]
Length = 315
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 97/308 (31%), Positives = 160/308 (51%), Gaps = 6/308 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR++FMGT EFA L +++ +++V V T P +PAG RG K S V A + L
Sbjct: 4 LRILFMGTPEFATTILDHVINEDYNVVGVVTAPDKPAG-RGRKIHESHVKGYAVKKGLKV 62
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L PT L EE+ + L+ ++V ++P+++ + G +N HASLLP++RGAAPI
Sbjct: 63 LQPTNLKSEEFSEQLNELDPNVIIVVAFRMLPKQVWQYPEYGTFNLHASLLPQYRGAAPI 122
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ TG++ +D+ +DTG + ++ I+ + L +L L + E +
Sbjct: 123 HWAIINGETTTGVSTFFIDEKIDTGEMILQKETTITPDETVGDLHDKLMNLGCSTVTETL 182
Query: 183 DKLEQNNLPLSPQIENGI-TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ + +PQ +N A K++ TRV++ V+N IR L+PFP A+ +
Sbjct: 183 KLISEDTVTTTPQPQNITLKTAYKLNNDNTRVDWSLPVNEVYNKIRGLNPFPVAYTILYQ 242
Query: 242 GNKHERIKLLESQL--VEGEGKPGEV-INPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
N+ R+KL + ++ E PG + I + IA G + + LQ G R + I D
Sbjct: 243 DNEELRMKLYKVRMRQEEHSKSPGTINIEDSTLKIAAKDGFILVEELQLPGKRKMAIKDL 302
Query: 298 LLGCPVII 305
L G
Sbjct: 303 LNGFSFKE 310
>gi|319892210|ref|YP_004149085.1| Methionyl-tRNA formyltransferase [Staphylococcus pseudintermedius
HKU10-03]
gi|317161906|gb|ADV05449.1| Methionyl-tRNA formyltransferase [Staphylococcus pseudintermedius
HKU10-03]
Length = 310
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 160/308 (51%), Gaps = 13/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ +++FMGT +F+ A L+ L+ + +++V TQP RP G R V K A +
Sbjct: 1 MS-KIIFMGTPDFSTAILEMLIDTE-EVIAVVTQPDRPVG-RKRVLTPPPVKKVAVAHDI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G E E L D+ V A+G ++P+ +L K G N HASLLP++RG
Sbjct: 58 PVYQPEKLSGSAELETLLQMECDLIVTAAFGQLLPESLLEHPKFGAVNVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETG+ IM M K LD G + + +PI N + +LS L +
Sbjct: 118 APIHQAIIDGEAETGVTIMYMVKKLDAGDIISQQAIPIEDKDNVGTMHDKLSRLGTELLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + +PQ E +++A I + + R+++ + A + NHIR LSP+P A+
Sbjct: 178 ETLPSIINGTNDRTPQDEALVSFASNIQREDERIDWTQDARTIFNHIRGLSPWPVAYTTF 237
Query: 240 MIGNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLDI 294
N KL E+Q V+G G+PGE+I + I A+ + +Q AG + + +
Sbjct: 238 EDKNM----KLYEAQFVKGQSGRPGEIIDVTKKHIIIGTGSDDAIALTEIQLAGKKRMSV 293
Query: 295 GDFLLGCP 302
FL G
Sbjct: 294 AQFLSGFQ 301
>gi|325955264|ref|YP_004238924.1| methionyl-tRNA formyltransferase [Weeksella virosa DSM 16922]
gi|323437882|gb|ADX68346.1| Methionyl-tRNA formyltransferase [Weeksella virosa DSM 16922]
Length = 311
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 105/303 (34%), Positives = 156/303 (51%), Gaps = 4/303 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+RVVFMGT EFA A+LQ + +S H IV V T P +PAG RG K SAV + A+E LP
Sbjct: 1 MRVVFMGTPEFAKASLQEIHENSLHEIVGVVTVPDKPAG-RGQKIQQSAVKQYAEEKKLP 59
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P KL + + + L VV ++P + + G +N H SLLP++RGAAP
Sbjct: 60 LLQPEKLRDKNFIEALKKLDADVFVVVAFRMLPHVVWSIPPKGTFNLHGSLLPQYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AIM G+ ETG+ +D+ +DTG + KV I + N + EL L +VE
Sbjct: 120 INWAIMNGEKETGVTTFLIDEKIDTGKILLTDKVAIGVDDNVGKIHDELMNLGKKLVVET 179
Query: 182 MDKLEQNNLPLSPQIENGI-TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D LE++++ PQ +A K+ K + R+++ E +HNH+R LSP+P AW +
Sbjct: 180 LDALEKDSITSYPQPLEKDLHHAPKLYKDDCRIDWSWKLEKIHNHVRGLSPYPAAWTMIN 239
Query: 241 IGN-KHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ K K+ + + + N + G I+ +Q G R + DF+
Sbjct: 240 GKSAKILAGKIAQDFPEDLSKNVLHLTKKNLFVRVENGVYEILEIQPQGKRKMSAKDFIN 299
Query: 300 GCP 302
G
Sbjct: 300 GNQ 302
>gi|257420430|ref|ZP_05597420.1| methionyl-tRNA formyltransferase [Enterococcus faecalis X98]
gi|257162254|gb|EEU92214.1| methionyl-tRNA formyltransferase [Enterococcus faecalis X98]
gi|315154708|gb|EFT98724.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0043]
Length = 313
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 101/307 (32%), Positives = 167/307 (54%), Gaps = 13/307 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L++L+ + + + +V TQP RP G R + V + A + +L
Sbjct: 1 MT-KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVG-RKKVITPTPVKEAALKHNL 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + D+ V A+G +P++IL A KLG N HASLLP++RG
Sbjct: 59 LVLQPEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ +I+ G+ ETG+ IM+M K +D G + R +PI+ + + ++LS+L ++
Sbjct: 119 APVHYSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + L + PQ+E T++ I++ + R+++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPMLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWPTAFTTY 238
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N K+ + PG +I IAC +G ++I RLQ AG L
Sbjct: 239 QGTNW----KIWAVTPLTETTTSAPGTIIQRSKKALWIACGEGTVLQIDRLQPAGKGQLT 294
Query: 294 IGDFLLG 300
I +FL G
Sbjct: 295 IQEFLNG 301
>gi|329894841|ref|ZP_08270641.1| Methionyl-tRNA formyltransferase [gamma proteobacterium IMCC3088]
gi|328922735|gb|EGG30069.1| Methionyl-tRNA formyltransferase [gamma proteobacterium IMCC3088]
Length = 322
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 123/319 (38%), Positives = 175/319 (54%), Gaps = 15/319 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLRV F GT EFA LQAL+ + V TQP RPAG RG K + S A+ ++P
Sbjct: 5 TLRVGFAGTPEFAAKHLQALLQHGFDVPLVLTQPDRPAG-RGKKLMPSPTKIVAEAANIP 63
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
PT L + ++ L+ DV VVVAYG+++PQ +L+ + G N HASLLPRWRGAA
Sbjct: 64 VWQPTSLKDDPIQKNLADQNLDVLVVVAYGMLLPQAVLDIPRYGCLNVHASLLPRWRGAA 123
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRA+ AGD ETG+ IM+M+ LDTGPV ++ PI+S L EL L A ++
Sbjct: 124 PVQRAVEAGDTETGVCIMQMEAGLDTGPVLAVQTCPITSRTTAGSLFSELETLGAKTLIT 183
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L+ PQ + TYA KI K E ++F +SA V IRA PFPGA+
Sbjct: 184 TLQDLKNLQGQAEPQDHDKSTYAHKIVKAEAFIDFSQSALTVDRKIRAFYPFPGAFT--- 240
Query: 241 IGNKHERIKLLESQLVE----GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLD 293
+ER+++LE+ +++ E G ++ + C G + + ++Q GG+ L
Sbjct: 241 -SANNERLRILEAAVLDDTSQSEHPAGTILEADGKGIQVQCGAGILSLTQVQLPGGKALA 299
Query: 294 IGDFLLGCP--VIIGCIVG 310
+ D L +G I+G
Sbjct: 300 VKDVLNSNKNPFAVGAILG 318
>gi|111657688|ref|ZP_01408416.1| hypothetical protein SpneT_02001122 [Streptococcus pneumoniae
TIGR4]
Length = 305
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 89/309 (28%), Positives = 151/309 (48%), Gaps = 11/309 (3%)
Query: 8 MGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MGT +F+ L+ L+ + I++V TQP R G R + V + A+E L P
Sbjct: 1 MGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVG-RKKVIQETPVKQAAKEAGLSIYQPE 59
Query: 67 KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
KL + L +V A L + N HASLLPR RG API A+
Sbjct: 60 KLSGSPEMEDLMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGGAPIHYAL 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ GD E G+ IM+M K +D G + R +PI+ N L ++L+++ +++ +
Sbjct: 120 IQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLLDTLPAYI 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
++ PQ + +T++ I E ++++ ++ + N IR ++P+P A +
Sbjct: 180 AGDIKPEPQDTSQVTFSPNIKPEEEKLDWNKTNRQLFNQIRGMNPWPVAHTFLKGD---- 235
Query: 247 RIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL--GC 301
R K+ E+ VEG+G PGE++ +A ++GA+ + ++Q AG +DI FL G
Sbjct: 236 RFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIASFLNGVGR 295
Query: 302 PVIIGCIVG 310
+ +G G
Sbjct: 296 TLTVGERFG 304
>gi|148658018|ref|YP_001278223.1| methionyl-tRNA formyltransferase [Roseiflexus sp. RS-1]
gi|166215506|sp|A5V070|FMT_ROSS1 RecName: Full=Methionyl-tRNA formyltransferase
gi|148570128|gb|ABQ92273.1| methionyl-tRNA formyltransferase [Roseiflexus sp. RS-1]
Length = 325
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 100/317 (31%), Positives = 164/317 (51%), Gaps = 12/317 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M LR+VF+G+ FAVA L+ LV + + +V V TQP RPAG RG SV + V + A
Sbjct: 1 MPLRIVFLGSPAFAVAPLERLVADARYQVVGVVTQPDRPAG-RGRASVATPVKQAALRLG 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P + + DV VV AYG ++ + +L LG+ N H SLLP +RG
Sbjct: 60 VPVLTPETLRDPAAVAELAALRPDVGVVAAYGEILRRDVLAIPPLGYVNIHPSLLPLYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
+P+ AI+ GD ETG+ IM +D +D+GP+ R VP+ + T L QEL + A +
Sbjct: 120 PSPVAGAILNGDAETGVTIMLIDAKMDSGPILAQRTVPLPPDARTGPLTQELFTIGADVL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
VE +D + + PQ T+ + +++ + +++ + A + RA P+PGA
Sbjct: 180 VETLDAYARGAITPQPQDHARATFTKLLTRDDGIIDWTQPAVRIERMTRAYDPWPGATT- 238
Query: 239 MMIGNKHERIKLLESQLVE---GEGKPGEVIN--PNFTIACSQGAVRIMRLQRAGGRVLD 293
+ +K++ ++++ + PG +I+ +A G + ++ +Q AG R L
Sbjct: 239 ---MWRGAPLKIIAARVIADRCADVPPGTLIDTADGPAVATGNGLLALITVQPAGKRPLP 295
Query: 294 IGDFLLGCPVIIGCIVG 310
D+ G + G +G
Sbjct: 296 AADWRRGLRLSGGERLG 312
>gi|228472839|ref|ZP_04057597.1| methionyl-tRNA formyltransferase [Capnocytophaga gingivalis ATCC
33624]
gi|228275890|gb|EEK14656.1| methionyl-tRNA formyltransferase [Capnocytophaga gingivalis ATCC
33624]
Length = 315
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 90/315 (28%), Positives = 145/315 (46%), Gaps = 7/315 (2%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M LR++FMGT +FA LQ +V +V+V T +PAG RG K S+V K A
Sbjct: 1 MKDLRIIFMGTPDFATGVLQRMVEEGLQVVAVVTVADKPAG-RGQKLQESSVKKYALSQQ 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P L P L E + L VV ++P+ + G +N HASLLP +RGA
Sbjct: 60 IPVLQPISLRDEAFLATLKEFQADVQVVVAFRMLPKVVWQMPSKGTFNLHASLLPDYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G+ TG+ +D +DTG + ++V I+ L +L + A +V
Sbjct: 120 APINWAIINGETTTGVTTFLIDDQIDTGAILLKKEVTIAPRETAGTLHDKLMTVGADLVV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYA-EKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + + PQ + + KI K +R+ + +S + +R ++P+P AW
Sbjct: 180 QTLALIASGQAVAKPQPKEVMPKEAPKIHKETSRIPWEKSLCEIDRFVRGMAPYPTAWAW 239
Query: 239 MMIGNKHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ + IK+ E+ V+ K G + + +A G ++I LQ + +
Sbjct: 240 LHHQGEEYAIKIYEATPVDEPHTLKIGSIRLQHKKIEVAVRGGFLQIEILQFPSKKRMTA 299
Query: 295 GDFLLGCPVIIGCIV 309
+FL G G
Sbjct: 300 QEFLNGFHFTEGDFF 314
>gi|329116865|ref|ZP_08245582.1| methionyl-tRNA formyltransferase [Streptococcus parauberis NCFD
2020]
gi|326907270|gb|EGE54184.1| methionyl-tRNA formyltransferase [Streptococcus parauberis NCFD
2020]
Length = 311
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 160/316 (50%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT +F+ LQ ++ + I++V TQP R G R + ++ V + A
Sbjct: 1 MT-KILFMGTPQFSATVLQGILDDGKYDILAVVTQPDRAVG-RKKEIKMTPVKEVALANQ 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + + + ++ A L + N HASLLP++RG
Sbjct: 59 LPIYQPEKLSGSKELEDIMALGADGIITAAFGQFLPSKLLNSVDFALNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G+ E G+ IM+M K +D G + PI+ N + ++L+V+ ++
Sbjct: 119 APIHYAIINGEKEAGVTIMEMVKEMDAGDMVSKASTPITETDNVGTMFEKLAVIGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + L + Q + T++ IS E ++++ ++A +V N +R ++P+P A +
Sbjct: 179 ETLPAYLSGELKPTTQDHSQATFSPNISSEEEKIDWSKTARDVFNQVRGMNPWPIAHTYL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R KL E ++V+G+G+PG++I + +A + AV + +Q AG + I D
Sbjct: 239 SG----QRFKLYEVEVVDGQGQPGQIIAKNKKSLVVAAGKQAVALKLVQPAGKPKMGIAD 294
Query: 297 FLL--GCPVIIGCIVG 310
FL G + IG G
Sbjct: 295 FLNGVGRELEIGDRFG 310
>gi|257088234|ref|ZP_05582595.1| methionyl-tRNA formyltransferase [Enterococcus faecalis D6]
gi|256996264|gb|EEU83566.1| methionyl-tRNA formyltransferase [Enterococcus faecalis D6]
gi|315026430|gb|EFT38362.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX2137]
Length = 313
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 102/307 (33%), Positives = 168/307 (54%), Gaps = 13/307 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L++L+ + + + +V TQP RP G R + V + A + +L
Sbjct: 1 MT-KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVG-RKKVITPTPVKEAALKHNL 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + D+ V A+G +P++IL A KLG N HASLLP++RG
Sbjct: 59 LVLQPEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEQILKAPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ +I+ G+ ETG+ IM+M K +D G + R +PI+ + + ++LS+L ++
Sbjct: 119 APVHYSIIEGEKETGVTIMEMVKKMDAGAILAQRAIPITKQDDVGTMFEKLSILGKELLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + PQ+E T++ I++ + R+++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPKLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWPTAFTTY 238
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N K+ + PG +I IAC +G ++I RLQ AG L
Sbjct: 239 QGTNW----KIWAVTPLTETTTSAPGTIIQRSKKALWIACGEGTVLQIDRLQPAGKGQLT 294
Query: 294 IGDFLLG 300
I +FL G
Sbjct: 295 IQEFLNG 301
>gi|239948083|ref|ZP_04699836.1| methionyl-tRNA formyltransferase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239922359|gb|EER22383.1| methionyl-tRNA formyltransferase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 303
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 103/310 (33%), Positives = 168/310 (54%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMGT EFAV + L+ + H + +V+TQ + G RGL S +H+ A E +P
Sbjct: 1 MKVIFMGTPEFAVPAFKKLI-THHEVRAVFTQQSKAKG-RGLNLAKSPIHQLAFEHQIPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P+ E + NAD+ VV+AYG ++P+ IL A K G N H S LPR RGAAP
Sbjct: 59 YTPSTLRNDEIINRINKVNADIIVVIAYGFIVPKAILEAKKYGCLNIHPSDLPRHRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QR I+ GD ++ + IM+MD LDTG + + L + + L A +++
Sbjct: 119 LQRTIIEGDRKSSVCIMRMDAGLDTGDILMKEDFNLEERTTLEELYNKCANLGAELLIKT 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ Q +GITYA K++K E ++N+ SA + IR ++P+PGA+
Sbjct: 179 LANIDNI--VPIKQSSDGITYAHKLTKEEGKINWHESAYKIDCKIRGMNPWPGAYFSY-- 234
Query: 242 GNKHERIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ IK+LE++ + + G VI+ IAC G +R+ +LQ+ + L+I +FL
Sbjct: 235 --NDKIIKILEAEYLNTDHHFTSGTVISDKLEIACGSGILRVKKLQQESKKALNIEEFLR 292
Query: 300 GCPVIIGCIV 309
G ++ ++
Sbjct: 293 GTNILKDTVL 302
>gi|86609442|ref|YP_478204.1| methionyl-tRNA formyltransferase [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|123751673|sp|Q2JK54|FMT_SYNJB RecName: Full=Methionyl-tRNA formyltransferase
gi|86557984|gb|ABD02941.1| methionyl-tRNA formyltransferase [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 322
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 109/317 (34%), Positives = 156/317 (49%), Gaps = 11/317 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVS--SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+RVVF GT EFA+ +LQ L+ S +V + QP RP G RG K + AQ +
Sbjct: 1 MRVVFFGTPEFALPSLQILLQPQSPFEVVGLVCQPDRPQG-RGQKVLPPPTKVLAQAHGI 59
Query: 61 PALVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
P P + + + ADV VVVAYG ++P +L KLG N H SLLP +RG
Sbjct: 60 PVWQPVRLRRDPQVLAALEALAADVFVVVAYGQILPLTVLQMPKLGCVNVHGSLLPAYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQ AI G+ ETG+ M MD+ +DTG + K+PI + L +L+ L A +
Sbjct: 120 AAPIQWAIANGETETGVTTMLMDEGMDTGAILLQAKLPIGPEQTSLELAPQLAQLGAELL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
VE + KLE+ L PQ + TYA + K + +++ R A+ +HN IRA SP +E
Sbjct: 180 VETLLKLEKGELTPIPQDGSRATYAPLLKKQDFHLDWQRPAQALHNQIRAFSPNCFTGIE 239
Query: 239 MMIGNKHER--IKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVL 292
+L +G PGEV+ +A +G++ I R Q G +
Sbjct: 240 GQRIKIVRSASPQLHSPPPEIPQGSPGEVVGLARGEGIYVATGEGSLLIRRAQLPGKKEQ 299
Query: 293 DIGDFLLGCPVIIGCIV 309
D + G + +G
Sbjct: 300 SAWDLVNGGQLKVGMRF 316
>gi|260592174|ref|ZP_05857632.1| methionyl-tRNA formyltransferase [Prevotella veroralis F0319]
gi|260535808|gb|EEX18425.1| methionyl-tRNA formyltransferase [Prevotella veroralis F0319]
Length = 337
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 89/325 (27%), Positives = 154/325 (47%), Gaps = 24/325 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT EFAV +L+ALV + +++V+V TQP +P GR K SAV + A E LP
Sbjct: 6 IRIIFMGTPEFAVESLKALVENDYNVVAVVTQPDKPVGRHQEKLQPSAVKQYALEKGLPV 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P K+ E+ + L VV ++P+ + +LG +N HA+LLP++RGAAPI
Sbjct: 66 LQPVKMKDPEFIEELRSYHADLQVVVAFRMLPEIVWAMPRLGTFNVHAALLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV---------- 172
A++ G+ +TG+ +DK +DTG + + I + + L
Sbjct: 126 NWAVINGETQTGVTTFFLDKDIDTGRIIMQKPFDIPDTADVEYVYDGLMHLGATIAIDTI 185
Query: 173 ------LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
L + + Q + A KI K +N+ + A+ +++ I
Sbjct: 186 NLIASKLPEDNLDVDFSHVLDEISVPQEQENIELKSAPKIFKETCEINWSQPAKTIYDFI 245
Query: 227 RALSPFPGAWLEMMIGNKHE----RIKLLESQLVE--GEGKPGE--VINPNFTIACSQGA 278
R LSP+PGAW +++ + + +K+ ++ G G V + + +
Sbjct: 246 RGLSPYPGAWGSLVLNDGSKSKSLVMKIYKTSKTNRAATGTVGSLVVEKNHLYVNTTDNL 305
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPV 303
+ ++ +Q +G + + FL G V
Sbjct: 306 LELLDIQLSGKKRMGAPSFLNGFKV 330
>gi|168212409|ref|ZP_02638034.1| methionyl-tRNA formyltransferase [Clostridium perfringens CPE str.
F4969]
gi|170716001|gb|EDT28183.1| methionyl-tRNA formyltransferase [Clostridium perfringens CPE str.
F4969]
Length = 317
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 91/318 (28%), Positives = 162/318 (50%), Gaps = 13/318 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +F+V +L+ ++ +++ ++ TQP +P+G RG K +S + + +P
Sbjct: 1 MKIVFMGTPDFSVPSLKKMIE-KYNVSAIVTQPDKPSG-RGKKVSISPIKEVGLSNEIPI 58
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ + D +VVAYG ++ + IL+ +LG HASLLP +RG+A
Sbjct: 59 FQPEKIRTDSVIINKLKEIEPDFIIVVAYGQILTKEILDIPRLGCICLHASLLPMYRGSA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI ++ G+ +TG + MD +DTG + +V IS ++ L L + A + E
Sbjct: 119 PINWCLINGETKTGNTTILMDTGIDTGDMLMRSEVEISESMTAGELYNLLKINGAELLEE 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA----W 236
++ + + Q +G +Y + ++K ++N+ S+ N+HN IR LS +P W
Sbjct: 179 TINGIITGKICGVKQPNDGSSYVKMLNKQMAKINWNDSSTNIHNLIRGLSSWPYKNINSW 238
Query: 237 LEMMIGNKHERIKLLESQLVEGE--GKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRV 291
K K+ +S+ +E PG +I+ +A G + I LQ GG+
Sbjct: 239 PTAYTYYKDIPFKIFKSKSLEANIIDPPGYIIDANDEGIKVATKNGILIIEILQFPGGKP 298
Query: 292 LDIGDFLLGCPVIIGCIV 309
L++ +FL G + G I+
Sbjct: 299 LEVKEFLKGNKIEKGIIL 316
>gi|189461483|ref|ZP_03010268.1| hypothetical protein BACCOP_02142 [Bacteroides coprocola DSM 17136]
gi|189431817|gb|EDV00802.1| hypothetical protein BACCOP_02142 [Bacteroides coprocola DSM 17136]
Length = 323
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 103/310 (33%), Positives = 162/310 (52%), Gaps = 10/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+V+MGT EFAV +L+ LV ++IV V T P +P GR G S V + A L
Sbjct: 6 LRIVYMGTPEFAVESLKRLVEGGYNIVGVITMPDKPMGRHGSVLQPSPVKQYAVSQGLKV 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL EE+ L +V ++P+ + + +LG +N HASLLP++RGAAPI
Sbjct: 66 LQPEKLKNEEFVAELRSLNADLQIVVAFRMLPEVVWSMPRLGTFNLHASLLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ GD ETGI + +DTG + +VPI+ N + + L L +++ +
Sbjct: 126 NWAVINGDTETGITTFFLKHEIDTGEIIDQVRVPIADTDNVEVVYERLMRLGGDLVLKTV 185
Query: 183 DKLEQNNLPLSPQIE----NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
D + + ++ PQ E + A KI K R+++ + +++ +R LSP+P AW E
Sbjct: 186 DAILEGSVKTIPQEELAQVGELRPAPKIFKETCRIDWTIGVKRIYDFVRGLSPYPAAWTE 245
Query: 239 MMIGN-KHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+ +K+ E++ + E PG ++ F IA S G V ++ LQ AG + +
Sbjct: 246 LYQEGTDPVMLKIFETEKLFCEHSLAPGTIVTDCKTYFKIASSDGYVNVLSLQLAGKKRM 305
Query: 293 DIGDFLLGCP 302
+I DFL G
Sbjct: 306 EINDFLRGYR 315
>gi|308272080|emb|CBX28688.1| Methionyl-tRNA formyltransferase [uncultured Desulfobacterium sp.]
Length = 325
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 109/313 (34%), Positives = 172/313 (54%), Gaps = 11/313 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R++FMGT +FAV +L AL +V V TQP RP G RG K V S V + A E
Sbjct: 18 RIIFMGTPDFAVPSLTALNKMGCEVVLVVTQPDRPKG-RGRKVVYSPVKQTALELGYSIA 76
Query: 64 VPTKLGQEEYEQ-FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P + E+ S D+ VV+A+G ++P+ IL K G N HASLLP++RG API
Sbjct: 77 QPASVKTSEFFDLINSCTPDLFVVIAFGHILPKNILAIPKQGAINLHASLLPKYRGPAPI 136
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q A++ +N+TGI M MD+ LDTG + ++ ISS ++ L L++ + +++ +
Sbjct: 137 QWAVINRENKTGITAMLMDQGLDTGDILMTSEIDISSKDTSSLLHDRLALAASDLLIKTL 196
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
LE N L PQ + TYA + K + R+++ +SAE++ IR ++P+PGA+
Sbjct: 197 SGLEANTLTPVPQDNSLATYAPLLKKKDGRIDWSKSAEDIEAFIRGINPWPGAFT----M 252
Query: 243 NKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
N +R+K+ + ++ K PG V+ + +A + + I +Q G+ +I D+
Sbjct: 253 NGEKRLKIFAADVIASSIKQPPGTVVGETREHLFVATGKDLLSIKEIQEESGKRHNIKDY 312
Query: 298 LLGCPVIIGCIVG 310
L GC + G I+G
Sbjct: 313 LCGCNIRPGTILG 325
>gi|290961865|ref|YP_003493047.1| methionyl-tRNA formyltransferase [Streptomyces scabiei 87.22]
gi|260651391|emb|CBG74513.1| methionyl-tRNA formyltransferase [Streptomyces scabiei 87.22]
Length = 310
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 103/314 (32%), Positives = 159/314 (50%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++AQE +
Sbjct: 1 MKLVFAGTPEVAVPALDALIASGRHEVAAVVTRPDAPAG-RGRRLVASPVAQRAQEAGIE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + E++ + D VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 60 VLKPARPRDEDFLARLREIAPDCCPVVAYGALLPRIALDVPAHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q +IMAGD TG + +++ LD+GPV I + L L+ + +
Sbjct: 120 PVQHSIMAGDEITGASTFLIEEGLDSGPVYGTVTEEIRPTDTSGDLLTRLAFAGSGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ +GIT+A KI+ + R+++ A V +R +P PGAW
Sbjct: 180 TMDGIEDGTLKAVPQPADGITHAPKITVEDARIDWAAPALRVDRVVRGCTPAPGAWTTF- 238
Query: 241 IGNKHERIKLLESQLVEGE--GKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+KL+ V PG ++ + + AV ++ +Q G + + D
Sbjct: 239 ---RGERLKLVHVTPVPERTGLAPGALDIGKNSVHVGTGSYAVELLWVQAQGKKPMRAAD 295
Query: 297 FLLGCPVIIGCIVG 310
+ G + G VG
Sbjct: 296 WARGARIDAGETVG 309
>gi|94676461|ref|YP_588857.1| methionyl-tRNA formyltransferase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|123260543|sp|Q1LT57|FMT_BAUCH RecName: Full=Methionyl-tRNA formyltransferase
gi|94219611|gb|ABF13770.1| methionyl-tRNA formyltransferase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 311
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 111/315 (35%), Positives = 175/315 (55%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT FA L L++S + +V V TQP R AG RG SAV + A + +LP
Sbjct: 1 MRILFAGTPSFAAHYLSVLINSPYKVVGVLTQPDRAAG-RGNYLATSAVKQLAIKHNLPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L + + + + D+ VVVAYG++IPQ +L KLG N H SLLPRWRGAAP
Sbjct: 60 FQPEYLHENNGKHIIEHISVDILVVVAYGMIIPQDMLMFPKLGGINIHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+ AGD +TGI I++MD LDTGP+ + I + L +L+ + + A++
Sbjct: 120 IQRALWAGDIKTGITIIQMDDGLDTGPILYQVACKILPVDTSTTLYAKLAKIGSTALLAT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ + + PQ TYA K++K E R+++ +A + IRA +P+P ++ ++
Sbjct: 180 LKQIITGSQVIEPQNNKFATYARKLNKKEARIDWQLTANQLERCIRAFNPWPISFFKIRD 239
Query: 242 GNKHERIKLLESQL--VEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
IK+ +Q+ + PG +++ IA +GA+ I ++Q AG + + + D
Sbjct: 240 T----IIKVWGAQIDDINYHHIPGTILSVDPVGIKIATGKGAIIITQIQLAGTKQMPVKD 295
Query: 297 FLLGCP--VIIGCIV 309
FL P I G I+
Sbjct: 296 FLNSRPTWFIPGNIL 310
>gi|303234026|ref|ZP_07320675.1| methionyl-tRNA formyltransferase [Finegoldia magna BVS033A4]
gi|302494951|gb|EFL54708.1| methionyl-tRNA formyltransferase [Finegoldia magna BVS033A4]
Length = 310
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 94/312 (30%), Positives = 161/312 (51%), Gaps = 5/312 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M ++VF G+ +FAV +LQ L + ++ I V +Q + R K +AV K+A E
Sbjct: 1 MKNKIVFAGSPDFAVESLQRLYDNPNNEIQLVISQEDKKRNR--NKFSPTAVKKRAMELG 58
Query: 60 LPALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ + P + EE N D VVVAYG +I +RIL+ K N HAS+LP++RG
Sbjct: 59 IDVITPKNINDEEVFDLLDKLNPDFIVVVAYGQLIKKRILDRFKNKILNVHASILPKYRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+PI +++ GD E+G++IM +++ LDTG V + K+ + + I L +L ++ A +
Sbjct: 119 ASPINYSLLNGDKESGVSIMLVEQGLDTGDVLAVDKIELDNEIMLEELHDKLMIMGADLI 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ +D ++ Q EN + KI K ++NF ++ ++N R L+P+PG + +
Sbjct: 179 NKVIDDYQKYFDSRKKQNENEASVVGKIHKSMGQINFNEKSDVIYNKFRGLTPWPGLFFK 238
Query: 239 MMIGNKH-ERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ I +++ G+ +V +AC G + I RLQ + L+I ++
Sbjct: 239 LEDKIIKVHNINIIKQYNDNKNGEVVKVDKNGIKVACEDGFIIITRLQLPNKKPLNISEY 298
Query: 298 LLGCPVIIGCIV 309
L G G I+
Sbjct: 299 LNGNSFEEGIIL 310
>gi|254491134|ref|ZP_05104315.1| methionyl-tRNA formyltransferase [Methylophaga thiooxidans DMS010]
gi|224463647|gb|EEF79915.1| methionyl-tRNA formyltransferase [Methylophaga thiooxydans DMS010]
Length = 309
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 121/312 (38%), Positives = 177/312 (56%), Gaps = 7/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT FA TL AL++S H I +VY+QP RPAG RG K S V + A E ++P
Sbjct: 1 MRIIFAGTPAFAAETLAALLASEHEICAVYSQPDRPAG-RGRKLTASPVKQLALEHNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P QE Q L+ D+ +VVAYGL++PQR+L+ KLG N HASLLPRWRGAAP
Sbjct: 60 EQPLNFKQENSIQTLADYQADLMIVVAYGLLLPQRVLDTPKLGCINVHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+AGD+++G+ IM+M+ LDTGPV + ISSN + L L+ L A +++
Sbjct: 120 IQRAILAGDSQSGVCIMQMEAGLDTGPVLLEARCDISSNDTSQNLHDRLAKLGAQTLLDC 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + PQ + YAEK+ K E +++ + A + I A +P+P A
Sbjct: 180 LDDFDTFQEAAKPQDDTHSCYAEKLQKQEAVIDWQQPAGTLSRQINAFNPWPVAQTVW-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
RI E ++ + G++I +A ++G +RI +LQ G R + + DFL
Sbjct: 238 RGDTFRIWQAEHIDIKSDASAGDIIAVSKTGIDVATAKGVIRIKQLQVPGKRAMPVTDFL 297
Query: 299 LGCPVIIGCIVG 310
+ +G +G
Sbjct: 298 NANSIEVGEHLG 309
>gi|307288888|ref|ZP_07568861.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0109]
gi|306500160|gb|EFM69504.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0109]
gi|315164415|gb|EFU08432.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1302]
Length = 313
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 103/307 (33%), Positives = 168/307 (54%), Gaps = 13/307 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L++L+ + + + +V TQP RP G R + V + A + +L
Sbjct: 1 MT-KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVG-RKKVITPTPVKEAALKHNL 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + DV V A+G +P++IL A KLG N HASLLP++RG
Sbjct: 59 LVLQPEKISGSPEMEKVIDLAPDVIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ +I+ G+ ETG+ IM+M K +D G + R +PI+ + + ++LS+L ++
Sbjct: 119 APVHYSIIEGEKETGVTIMEMVKKMDAGAILAQRAIPITKQDDVGTMFEKLSILGKELLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + PQ+E T++ I++ + R+++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPKLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWPTAFTTY 238
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N K+ + PG +I IAC +G ++I RLQ AG L
Sbjct: 239 QGTNW----KIWAVTPLTETTTSAPGTIIQRSKKALWIACGEGTVLQIDRLQPAGKGQLT 294
Query: 294 IGDFLLG 300
I +FL G
Sbjct: 295 IQEFLNG 301
>gi|149176746|ref|ZP_01855357.1| methionyl-tRNA formyltransferase [Planctomyces maris DSM 8797]
gi|148844387|gb|EDL58739.1| methionyl-tRNA formyltransferase [Planctomyces maris DSM 8797]
Length = 333
Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 106/328 (32%), Positives = 172/328 (52%), Gaps = 20/328 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M L+VV MGT FA+ QAL+ S H ++ +YTQP R RG + + + A E +
Sbjct: 1 MALKVVMMGTGTFAIPAFQALIDSQHEVLGLYTQPDRTG--RGHHRHKNPMKELALEHGI 58
Query: 61 PALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K+ E + LS DV +V AYG ++ Q++L+ +LG +N HASLLP +RGA
Sbjct: 59 PVFQPAKINTPESLKELSQLKADVLLVAAYGQILSQKLLDLPRLGAFNLHASLLPAYRGA 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI G+ TG+++ ++++ LD+GPVA M + PI T LQ L+ L A +
Sbjct: 119 APILYAIRNGETMTGVSLFRIERALDSGPVAAMVETPIDPKETTGMLQDRLAELAAPLAM 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +D++EQ L +PQ T+A + K E +++ ++AE + H+RA+ P+P + +
Sbjct: 179 DVLDQIEQGTLVETPQDHAAATFAPTLDKQEGAIDWNQTAEQIACHVRAMQPWPSPFSFL 238
Query: 240 MIGNK-HERIKLLESQLVEGEG-------------KPGEVI---NPNFTIACSQGAVRIM 282
+ R+ +L+ + + E PG V+ + G + I
Sbjct: 239 LQSGHEPLRLLILDVEKLSKEALESLEIEPQSREFTPGTVVFSSTKRVVLCTGDGLLEIR 298
Query: 283 RLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
++Q G R ++I FL G + G + G
Sbjct: 299 QIQPQGKRAMEISQFLCGKQIRPGDVFG 326
>gi|256960469|ref|ZP_05564640.1| methionyl-tRNA formyltransferase [Enterococcus faecalis Merz96]
gi|257080478|ref|ZP_05574839.1| methionyl-tRNA formyltransferase [Enterococcus faecalis E1Sol]
gi|293385127|ref|ZP_06630953.1| methionyl-tRNA formyltransferase [Enterococcus faecalis R712]
gi|293389100|ref|ZP_06633572.1| methionyl-tRNA formyltransferase [Enterococcus faecalis S613]
gi|307276656|ref|ZP_07557774.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX2134]
gi|312902127|ref|ZP_07761387.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0470]
gi|312906689|ref|ZP_07765689.1| methionyl-tRNA formyltransferase [Enterococcus faecalis DAPTO 512]
gi|312910849|ref|ZP_07769685.1| methionyl-tRNA formyltransferase [Enterococcus faecalis DAPTO 516]
gi|256950965|gb|EEU67597.1| methionyl-tRNA formyltransferase [Enterococcus faecalis Merz96]
gi|256988508|gb|EEU75810.1| methionyl-tRNA formyltransferase [Enterococcus faecalis E1Sol]
gi|291077604|gb|EFE14968.1| methionyl-tRNA formyltransferase [Enterococcus faecalis R712]
gi|291081568|gb|EFE18531.1| methionyl-tRNA formyltransferase [Enterococcus faecalis S613]
gi|306506766|gb|EFM75918.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX2134]
gi|310627337|gb|EFQ10620.1| methionyl-tRNA formyltransferase [Enterococcus faecalis DAPTO 512]
gi|311288872|gb|EFQ67428.1| methionyl-tRNA formyltransferase [Enterococcus faecalis DAPTO 516]
gi|311290791|gb|EFQ69347.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0470]
Length = 313
Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 102/307 (33%), Positives = 168/307 (54%), Gaps = 13/307 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L++L+ + + + +V TQP RP G R + V + A + +L
Sbjct: 1 MT-KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVG-RKKVITPTPVKEAALKHNL 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + D+ V A+G +P++IL A KLG N HASLLP++RG
Sbjct: 59 LVLQPEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ +I+ G+ ETG+ IM+M K +D G + R +PI+ + + ++LS+L ++
Sbjct: 119 APVHYSIIEGEKETGVTIMEMVKKMDAGAILAQRAIPITKQDDVGTMFEKLSILGKELLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + PQ+E T++ I++ + R+++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPKLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWPTAFTTY 238
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N K+ + PG +I IAC +G ++I RLQ AG L
Sbjct: 239 QGTNW----KIWAVTPLTETTTSAPGTIIQRSKKALWIACGEGTVLQIDRLQPAGKGQLT 294
Query: 294 IGDFLLG 300
I +FL G
Sbjct: 295 IQEFLNG 301
>gi|302392196|ref|YP_003828016.1| methionyl-tRNA formyltransferase [Acetohalobium arabaticum DSM
5501]
gi|302204273|gb|ADL12951.1| methionyl-tRNA formyltransferase [Acetohalobium arabaticum DSM
5501]
Length = 321
Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 107/317 (33%), Positives = 169/317 (53%), Gaps = 15/317 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ V+FMGT +FAV TL+ L+ ++ V TQP RP G RG K S V K+A + L
Sbjct: 1 MDVIFMGTPDFAVPTLKRLIKEEFTDLIGVVTQPDRPRG-RGQKLHPSPVKKEALKEDLT 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + + L N DV VV+AYG V+ IL KLG N HASLLP++RG+
Sbjct: 60 LLQPEDINSSDSVAKLKELNPDVIVVIAYGQVLDNEILELPKLGCINVHASLLPKYRGSG 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ R ++ G+ +TGI + M++ LDTG + +V I+S L L+VL A ++E
Sbjct: 120 PLHRVLINGEEKTGITTIYMEEGLDTGDMILQEEVEITSEETVGQLHDRLAVLGADVLIE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ ++ PQ + TYA+KI+K E R+++ SA + N IR ++P+PGA+
Sbjct: 180 TLELIKSGEAERIPQDDRKATYAQKINKEEGRIDWTASAYEIKNLIRGMNPWPGAYTFYN 239
Query: 241 IGNKHERIKLLESQLVEGEGKP----GEVIN----PNFTIACSQGAVRIMRLQRAGGRVL 292
R+K+ S++ + + KP G V++ F + +G + I +Q + +
Sbjct: 240 DN----RLKVWGSKIYDSKTKPSVIPGTVVDIEAESGFIVQSGEGQLLINEVQPENKQRM 295
Query: 293 DIGDFLLGCPVIIGCIV 309
DFL G + G ++
Sbjct: 296 SANDFLRGYDLQEGTLL 312
>gi|302380754|ref|ZP_07269219.1| methionyl-tRNA formyltransferase [Finegoldia magna ACS-171-V-Col3]
gi|302311697|gb|EFK93713.1| methionyl-tRNA formyltransferase [Finegoldia magna ACS-171-V-Col3]
Length = 310
Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 93/312 (29%), Positives = 161/312 (51%), Gaps = 5/312 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M ++VF G+ +FAV +LQ L + ++ I V +Q + R K +AV K+A E
Sbjct: 1 MKNKIVFAGSPDFAVESLQRLYDNPNNEIQLVISQEDKKRNR--NKFSPTAVKKRAMELG 58
Query: 60 LPALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ + P + EE N D VVVAYG +I +RIL+ K N HAS+LP++RG
Sbjct: 59 IDVITPKNINDEEVFDLLDKLNPDFIVVVAYGQLIKKRILDRFKNKILNVHASILPKYRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+PI +++ GD E+G++IM +++ LD+G V + K+ + + I L +L ++ A +
Sbjct: 119 ASPINYSLLNGDKESGVSIMLVEQGLDSGDVLAVDKIELDNEIMLEELHDKLMIMGADLI 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ +D ++ Q EN + KI K ++NF ++ ++N R L+P+PG + +
Sbjct: 179 NKVIDDYQKYFDSRKEQNENEASIVGKIHKSMGQINFNEKSDVIYNKFRGLTPWPGLFFK 238
Query: 239 MMIGNKH-ERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ I +++ G+ +V +AC G + I RLQ + L+I ++
Sbjct: 239 LEDKIIKVHNINIIKQYNDNKNGEVVKVDKNGIKVACEDGFIIITRLQLPNKKPLNISEY 298
Query: 298 LLGCPVIIGCIV 309
L G G I+
Sbjct: 299 LNGNSFEEGIIL 310
>gi|116628136|ref|YP_820755.1| methionyl-tRNA formyltransferase [Streptococcus thermophilus LMD-9]
gi|116101413|gb|ABJ66559.1| methionyl-tRNA formyltransferase [Streptococcus thermophilus LMD-9]
Length = 305
Score = 170 bits (430), Expect = 3e-40, Method: Composition-based stats.
Identities = 95/309 (30%), Positives = 150/309 (48%), Gaps = 11/309 (3%)
Query: 8 MGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MGT F+ L+ L+ + IV+V TQP R G R + ++ V + A LP P
Sbjct: 1 MGTPAFSATVLEGLLTDEHYDIVAVVTQPDRAVG-RKKEIRMTPVKELALAHELPIYQPE 59
Query: 67 KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
KL E L +V A L + N HASLLP++RG API AI
Sbjct: 60 KLSGSEEMAQLISLGADGIVTAAYGQFLPSKLLDSMDFAVNVHASLLPKYRGGAPIHYAI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ GD E G+ IM+M K +D G + + +PI N + ++L+VL ++E +
Sbjct: 120 INGDAEAGVTIMEMVKEMDAGDMVSQKALPILDQDNVGTMFEKLAVLGRDLLLETLPAYI 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ PQ + +T++ IS E R+++ +S ++ N IR + P+P A + +
Sbjct: 180 AGEIKPVPQDASQVTFSPNISPEEERLDWNKSGRDIFNQIRGMYPWPVAHTLL----NGK 235
Query: 247 RIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL--GC 301
R K+ E LVEG+G+ G +I + +A QGA+ + +Q G + I DFL G
Sbjct: 236 RFKIYEGDLVEGQGQAGHIIEKTKKSLVVATGQGAISLKSVQLEGKPRMAIADFLNGVGR 295
Query: 302 PVIIGCIVG 310
+ +G + G
Sbjct: 296 NLEVGDVFG 304
>gi|251797739|ref|YP_003012470.1| methionyl-tRNA formyltransferase [Paenibacillus sp. JDR-2]
gi|247545365|gb|ACT02384.1| methionyl-tRNA formyltransferase [Paenibacillus sp. JDR-2]
Length = 316
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 96/313 (30%), Positives = 157/313 (50%), Gaps = 6/313 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT EFAV +L+ L+ + +V+ +QP RP G R + + A F LP
Sbjct: 1 MRIVFMGTPEFAVPSLRLLIEQGYDVVAAVSQPDRPKG-RKRVLTPPPLKEAALAFGLPV 59
Query: 63 LVPTKLGQ-EEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++ E D+ V AYG ++P+ +L+ +LG N H SLLPR+RG AP
Sbjct: 60 LQPERMRSAEAVAAIAELQPDLIVTAAYGQILPKALLDIPRLGCINVHGSLLPRYRGGAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQR+I+ G+ TG+ IM M + LDTG + +VPI+ + L ++LS A +
Sbjct: 120 IQRSIINGETVTGVTIMYMAEGLDTGDMISKIEVPITDEDTSGTLFEKLSAAGAELLGRT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L L PQ TYA +++ + R+++ + A ++ N +R LSP GA+ +
Sbjct: 180 LPALLAGELQAEPQDNELATYAPNLTREDERIDWSKPARSIFNQVRGLSPMAGAFTYLNG 239
Query: 242 GNKHERIKL-LESQLVEGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + PG V+ + G +R++ +Q +G RV+ + D+
Sbjct: 240 EVFKVWACAKPDGKAGNESAAPGTVVAASTSGIDVQTGDGLLRLLEVQPSGKRVMTVADW 299
Query: 298 LLGCPVIIGCIVG 310
L G + + G
Sbjct: 300 LPGARLSSDAVFG 312
>gi|223932609|ref|ZP_03624609.1| methionyl-tRNA formyltransferase [Streptococcus suis 89/1591]
gi|223898719|gb|EEF65080.1| methionyl-tRNA formyltransferase [Streptococcus suis 89/1591]
Length = 312
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 96/316 (30%), Positives = 153/316 (48%), Gaps = 12/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMGT F+ L+ L++ ++I++V TQP R G R ++ V + A E++
Sbjct: 1 MT-KLIFMGTPAFSATVLRGLLADGNYNILAVVTQPDRAVG-RKKVIQMTPVKEVALEYN 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + L +V A L + N HASLLP++RG
Sbjct: 59 LPVYQPEKLSGSQEMDELMNLGADGIVTAAFGQFLPTELLNSVDFAVNVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ GD G+ IM+M K +D G + + I + N L ++L+V+ ++
Sbjct: 119 APIHYALINGDERAGVTIMEMVKEMDAGDMISSDSIAIEESDNVGTLFEKLAVVGRDLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+A+ +L Q +T++ I E +++ +SA + N IR + P+P A
Sbjct: 179 QALPAYIAGDLKPVAQNPEQVTFSPNIQPEEEVLDWKKSARQLFNQIRGMYPWPVAHT-- 236
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER K+ E+ VE EG G VI IA QGA+ + +Q AG + I D
Sbjct: 237 --YWQGERFKIQEAVEVEVEGPVGRVITRSKKELIIATGQGALSLKTVQPAGKPKMTIAD 294
Query: 297 FLLGCP--VIIGCIVG 310
FL G + +G G
Sbjct: 295 FLNGAGRDIAVGDQFG 310
>gi|254497985|ref|ZP_05110748.1| methionyl tRNA formyltransferase [Legionella drancourtii LLAP12]
gi|254352762|gb|EET11534.1| methionyl tRNA formyltransferase [Legionella drancourtii LLAP12]
Length = 313
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 109/316 (34%), Positives = 168/316 (53%), Gaps = 10/316 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M+ L +VF GT F + L AL S+H I ++YTQP RPAG RG K SA+ + A
Sbjct: 1 MSGLNIVFAGTPAFGLPCLDALAQSAHHIQAIYTQPDRPAG-RGRKLQASAIKEWALAHD 59
Query: 60 LPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P E L+ DV +V+AYGL++P+ +L +LG N HASLLPRWRG
Sbjct: 60 IPVYQPLNFKNPETVAELATLKPDVLIVIAYGLILPKSVLEIPRLGCVNVHASLLPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+PIQ AI+ GD E+G+ IM+MD +DTG + PI++ L +L+ + A +
Sbjct: 120 ASPIQHAILHGDAESGVTIMQMDIGMDTGDMLLKVSCPITTTDTATTLHDKLAQISAQPL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + +L N Q + TYA KI+K + +N+ ++A + IRA +P+P A+
Sbjct: 180 LKTLTELANNTARPEVQNNDLATYAGKINKEDALINWQQTAAEIDQKIRAFNPWPIAYT- 238
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++ + RI E PG V+ IA + + + ++Q GG+V+ I
Sbjct: 239 -LLNEEVLRIHQAHVVTTESTQTPGTVLHIDKKGMLIATGRQGILVEKIQLPGGKVITIA 297
Query: 296 DFLLGCP--VIIGCIV 309
D+L + +G I
Sbjct: 298 DWLNSSKSQIHVGLIF 313
>gi|229547452|ref|ZP_04436177.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1322]
gi|256854794|ref|ZP_05560158.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T8]
gi|229307484|gb|EEN73471.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1322]
gi|256710354|gb|EEU25398.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T8]
gi|315028354|gb|EFT40286.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX4000]
Length = 313
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 102/307 (33%), Positives = 168/307 (54%), Gaps = 13/307 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L++L+ + + + +V TQP RP G R + V + A + +L
Sbjct: 1 MT-KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVG-RKKVITPTPVKEAALKHNL 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + D+ V A+G +P++IL A KLG N HASLLP++RG
Sbjct: 59 LVLQPEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ +I+ G+ ETG+ IM+M K +D G + R +PI+ + + ++LS+L ++
Sbjct: 119 APVHYSIIEGEKETGVTIMEMVKKMDAGAILAQRAIPITKQDDVGTMFEKLSILGKELLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + PQ+E T++ I++ + R+++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPKLIAGEITPIPQVEEEATFSPNIAREQERIDWQKTAEAIDNQVRGMRPWPTAFTTY 238
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N K+ + PG +I IAC +G ++I RLQ AG L
Sbjct: 239 QGTNW----KIWAVTPLTETTTSAPGTIIQRSKKALWIACGEGTVLQIDRLQPAGKGQLT 294
Query: 294 IGDFLLG 300
I +FL G
Sbjct: 295 IQEFLNG 301
>gi|257886038|ref|ZP_05665691.1| methionyl-tRNA formyltransferase [Enterococcus faecium 1,231,501]
gi|294618611|ref|ZP_06698150.1| methionyl-tRNA formyltransferase [Enterococcus faecium E1679]
gi|257821894|gb|EEV49024.1| methionyl-tRNA formyltransferase [Enterococcus faecium 1,231,501]
gi|291595130|gb|EFF26468.1| methionyl-tRNA formyltransferase [Enterococcus faecium E1679]
Length = 312
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 101/308 (32%), Positives = 163/308 (52%), Gaps = 14/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L+ L+ S + I +V TQP RP G R + V + A + +
Sbjct: 1 MT-KLVFMGTPAFSVPILEGLIESGYEIQAVVTQPDRPVG-RKRVITPTPVKEAALKHGI 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + DV V A+G +P+++L KLG N HASLLP++RG
Sbjct: 59 RVLQPEKISGSPEMEEIIELAPDVIVTAAFGQFLPEKLLQVPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ AIM G+ ETG+ IM+M K +D G + +PI+ + + ++LS+L ++
Sbjct: 119 APVHYAIMNGEKETGVTIMEMIKKMDAGGIYAQESIPITKQDDVGTMFEKLSLLGRKLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ E+ T++ I++ + +++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPNIL-DGQKPVPQDESEATFSPNITREQEAIDWHKTAEEIDNQVRGMRPWPIAFTTY 237
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLD 293
R KLL +++ + PG +I N IAC Q + I LQ AG
Sbjct: 238 EG----IRWKLLSVEVLAETTDKAPGTIIRKDKKNLWIACGKQTVLAINELQPAGKGKQA 293
Query: 294 IGDFLLGC 301
+ DFL G
Sbjct: 294 VHDFLNGS 301
>gi|69245427|ref|ZP_00603422.1| Methionyl-tRNA formyltransferase [Enterococcus faecium DO]
gi|257879838|ref|ZP_05659491.1| methionyl-tRNA formyltransferase [Enterococcus faecium 1,230,933]
gi|257891679|ref|ZP_05671332.1| methionyl-tRNA formyltransferase [Enterococcus faecium 1,231,410]
gi|257894154|ref|ZP_05673807.1| methionyl-tRNA formyltransferase [Enterococcus faecium 1,231,408]
gi|260559511|ref|ZP_05831692.1| methionyl-tRNA formyltransferase [Enterococcus faecium C68]
gi|293563685|ref|ZP_06678126.1| methionyl-tRNA formyltransferase [Enterococcus faecium E1162]
gi|293570097|ref|ZP_06681177.1| methionyl-tRNA formyltransferase [Enterococcus faecium E1071]
gi|314938231|ref|ZP_07845531.1| methionyl-tRNA formyltransferase [Enterococcus faecium TX0133a04]
gi|314943128|ref|ZP_07849926.1| methionyl-tRNA formyltransferase [Enterococcus faecium TX0133C]
gi|314949325|ref|ZP_07852667.1| methionyl-tRNA formyltransferase [Enterococcus faecium TX0082]
gi|314952259|ref|ZP_07855273.1| methionyl-tRNA formyltransferase [Enterococcus faecium TX0133A]
gi|314992115|ref|ZP_07857565.1| methionyl-tRNA formyltransferase [Enterococcus faecium TX0133B]
gi|314996297|ref|ZP_07861353.1| methionyl-tRNA formyltransferase [Enterococcus faecium TX0133a01]
gi|68195809|gb|EAN10245.1| Methionyl-tRNA formyltransferase [Enterococcus faecium DO]
gi|257814066|gb|EEV42824.1| methionyl-tRNA formyltransferase [Enterococcus faecium 1,230,933]
gi|257828039|gb|EEV54665.1| methionyl-tRNA formyltransferase [Enterococcus faecium 1,231,410]
gi|257830533|gb|EEV57140.1| methionyl-tRNA formyltransferase [Enterococcus faecium 1,231,408]
gi|260074610|gb|EEW62931.1| methionyl-tRNA formyltransferase [Enterococcus faecium C68]
gi|291587469|gb|EFF19353.1| methionyl-tRNA formyltransferase [Enterococcus faecium E1071]
gi|291604369|gb|EFF33862.1| methionyl-tRNA formyltransferase [Enterococcus faecium E1162]
gi|313589541|gb|EFR68386.1| methionyl-tRNA formyltransferase [Enterococcus faecium TX0133a01]
gi|313593329|gb|EFR72174.1| methionyl-tRNA formyltransferase [Enterococcus faecium TX0133B]
gi|313595601|gb|EFR74446.1| methionyl-tRNA formyltransferase [Enterococcus faecium TX0133A]
gi|313598136|gb|EFR76981.1| methionyl-tRNA formyltransferase [Enterococcus faecium TX0133C]
gi|313642427|gb|EFS07007.1| methionyl-tRNA formyltransferase [Enterococcus faecium TX0133a04]
gi|313644274|gb|EFS08854.1| methionyl-tRNA formyltransferase [Enterococcus faecium TX0082]
Length = 312
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 101/308 (32%), Positives = 163/308 (52%), Gaps = 14/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L+ L+ S + I +V TQP RP G R + V + A + +
Sbjct: 1 MT-KLVFMGTPAFSVPILEGLIESGYEIQAVVTQPDRPVG-RKRVITPTPVKEAALKHGI 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + DV V A+G +P+++L KLG N HASLLP++RG
Sbjct: 59 RVLQPEKISGSPEMEEIIELVPDVIVTAAFGQFLPEKLLQVPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ AIM G+ ETG+ IM+M K +D G + +PI+ + + ++LS+L ++
Sbjct: 119 APVHYAIMNGEKETGVTIMEMIKKMDAGGIYAQESIPITKQDDVGTMFEKLSLLGRKLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ E+ T++ I++ + +++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPNIL-DGQKPVPQDESEATFSPNITREQEAIDWHKTAEEIDNQVRGMRPWPIAFTTY 237
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLD 293
R KLL +++ + PG +I N IAC Q + I LQ AG
Sbjct: 238 EG----IRWKLLSVEVLAETTDKAPGTIIRKDKKNLWIACGKQTVLAINELQPAGKGKQA 293
Query: 294 IGDFLLGC 301
+ DFL G
Sbjct: 294 VHDFLNGS 301
>gi|323464692|gb|ADX76845.1| methionyl-tRNA formyltransferase [Staphylococcus pseudintermedius
ED99]
Length = 310
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 160/308 (51%), Gaps = 13/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ +++FMGT +F+ A L+ L+ + +++V TQP RP G R V K A +
Sbjct: 1 MS-KIIFMGTPDFSTAILEMLIDTE-EVIAVVTQPDRPVG-RKRVLTPPPVKKVAVAHDI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G E E L D+ V A+G ++P+ +L K G N HASLLP++RG
Sbjct: 58 PVYQPEKLSGSAELETLLQTECDLIVTAAFGQLLPESLLEHPKFGAVNVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETG+ IM M K LD G + + +PI N + +LS L +
Sbjct: 118 APIHQAIIDGEAETGVTIMYMVKKLDAGDIISQQAIPIEDKDNVGTMHDKLSRLGTELLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + +PQ E +++A I + + R+++ + A + NHIR LSP+P A+
Sbjct: 178 ETLPSIINGTNDRTPQDEALVSFASNIQREDERIDWTQDARTIFNHIRGLSPWPVAYTTF 237
Query: 240 MIGNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLDI 294
N KL E+Q V+G G+PGE+I + + A+ + +Q AG + + +
Sbjct: 238 EDKNM----KLYEAQFVKGQSGRPGEIIDVTKKHIIVGTGSDDAIALTEIQLAGKKRMSV 293
Query: 295 GDFLLGCP 302
FL G
Sbjct: 294 AQFLSGFQ 301
>gi|227517270|ref|ZP_03947319.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0104]
gi|227075277|gb|EEI13240.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0104]
gi|315167223|gb|EFU11240.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1341]
Length = 313
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 103/307 (33%), Positives = 168/307 (54%), Gaps = 13/307 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L++L+ + + + +V TQP RP G R + V + A + +L
Sbjct: 1 MT-KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVG-RKKVITPTPVKEAALKHNL 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + DV V A+G +P++IL A KLG N HASLLP++RG
Sbjct: 59 LVLQPEKISGSPEMEKVIDLAPDVIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ +I+ G+ ETG+ IM+M K +D G + R +PI+ + + ++LS+L ++
Sbjct: 119 APVHYSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + PQ+E T++ I++ + R+++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPKLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWPTAFTTY 238
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N K+ + PG +I IAC +G ++I RLQ AG L
Sbjct: 239 QGTNW----KIWAVTPLTETTTSAPGTIIQRSKKALWIACGEGTVLQIDRLQPAGKGQLT 294
Query: 294 IGDFLLG 300
I +FL G
Sbjct: 295 IQEFLNG 301
>gi|299535920|ref|ZP_07049240.1| methionyl-tRNA formyltransferase [Lysinibacillus fusiformis ZC1]
gi|298728672|gb|EFI69227.1| methionyl-tRNA formyltransferase [Lysinibacillus fusiformis ZC1]
Length = 313
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 100/314 (31%), Positives = 164/314 (52%), Gaps = 14/314 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
+VFMGT +F+ L+ L ++I +V TQP RP G R V A E LP +
Sbjct: 4 IVFMGTPDFSAPILRMLHDEGYAIKAVVTQPDRPVG-RKRVLTPPPVKATALELGLPIIQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G EE +Q L+ D+ + A+G ++P+ +L+A LG N HASLLP++RG API
Sbjct: 63 PEKLRGSEELQQILALQPDLVITAAFGQILPKELLDAPALGCINVHASLLPKYRGGAPIH 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+A+M G+ ETG+ IM M + LD G + + +PI + +T GL +LS++ + E +
Sbjct: 123 QAVMDGEKETGVTIMYMAEKLDAGDIISQKAIPIEEDDHTGGLFDKLSMVGCELLKETLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ + Q E +T+A IS+ + R+++ A ++N +R L P+P A+ GN
Sbjct: 183 SIINGTNNRTVQDEEQVTFASNISREQERIDWTNDAITLYNQVRGLHPWPVAYTTFEDGN 242
Query: 244 KHERIKLLESQL--VEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDF 297
K+ + + + E PG V+ +F +A G + + +Q AG + + ++
Sbjct: 243 F----KIWWATIGKSKHEANPGTVVAIDKDHFEVAAGNGTTLALYDVQPAGKKRMTTEEY 298
Query: 298 LL--GCPVIIGCIV 309
L G + IG
Sbjct: 299 LRGTGSKLQIGDQF 312
>gi|198276893|ref|ZP_03209424.1| hypothetical protein BACPLE_03098 [Bacteroides plebeius DSM 17135]
gi|198270418|gb|EDY94688.1| hypothetical protein BACPLE_03098 [Bacteroides plebeius DSM 17135]
Length = 323
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 103/310 (33%), Positives = 163/310 (52%), Gaps = 10/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+V+MGT EFAV +L+ LV + +V V T P +P GR G S V + A L
Sbjct: 6 LRIVYMGTPEFAVESLKRLVEGGYQVVGVITMPDKPMGRHGSVLQPSPVKQYAVSQGLKV 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E + L +V ++P+ + N +LG +N HASLLP++RGAAPI
Sbjct: 66 LQPEKLKDENFLAELRDLKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ ETGI + +DTG + +VPI+ N + +L L +V+ +
Sbjct: 126 NWAVINGETETGITTFFLKHEIDTGEIIDQVRVPIADTDNVEIVYDKLMHLGGDLVVKTV 185
Query: 183 DKLEQNNLPLSPQIE----NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
D + + N+ PQ + + A KI K R+++ + V++ +R LSP+P AW E
Sbjct: 186 DAILEGNVKTIPQEQLAAATELRPAPKIFKETCRIDWQAGVKKVYDFVRGLSPYPAAWTE 245
Query: 239 MMIGN-KHERIKLLESQL--VEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVL 292
+ G+ +K+ E++ V KPG ++ F IA + G V+++ LQ AG + +
Sbjct: 246 LHQGDAAPLALKIFETEKVFVAHSLKPGSIVTDKKTYFQIASTDGFVKVLSLQLAGKKRM 305
Query: 293 DIGDFLLGCP 302
++ DFL G
Sbjct: 306 EVADFLRGYR 315
>gi|29377579|ref|NP_816733.1| methionyl-tRNA formyltransferase [Enterococcus faecalis V583]
gi|227554543|ref|ZP_03984590.1| methionyl-tRNA formyltransferase [Enterococcus faecalis HH22]
gi|256618122|ref|ZP_05474968.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ATCC 4200]
gi|256958400|ref|ZP_05562571.1| methionyl-tRNA formyltransferase [Enterococcus faecalis DS5]
gi|256962962|ref|ZP_05567133.1| methionyl-tRNA formyltransferase [Enterococcus faecalis HIP11704]
gi|257078289|ref|ZP_05572650.1| methionyl-tRNA formyltransferase [Enterococcus faecalis JH1]
gi|257417967|ref|ZP_05594961.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T11]
gi|294779980|ref|ZP_06745360.1| methionyl-tRNA formyltransferase [Enterococcus faecalis PC1.1]
gi|300861569|ref|ZP_07107653.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TUSoD Ef11]
gi|307270562|ref|ZP_07551860.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX4248]
gi|307273622|ref|ZP_07554850.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0855]
gi|307284852|ref|ZP_07565008.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0860]
gi|307292140|ref|ZP_07572006.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0411]
gi|33516854|sp|Q82ZD8|FMT_ENTFA RecName: Full=Methionyl-tRNA formyltransferase
gi|29345046|gb|AAO82803.1| methionyl-tRNA formyltransferase [Enterococcus faecalis V583]
gi|227176341|gb|EEI57313.1| methionyl-tRNA formyltransferase [Enterococcus faecalis HH22]
gi|256597649|gb|EEU16825.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ATCC 4200]
gi|256948896|gb|EEU65528.1| methionyl-tRNA formyltransferase [Enterococcus faecalis DS5]
gi|256953458|gb|EEU70090.1| methionyl-tRNA formyltransferase [Enterococcus faecalis HIP11704]
gi|256986319|gb|EEU73621.1| methionyl-tRNA formyltransferase [Enterococcus faecalis JH1]
gi|257159795|gb|EEU89755.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T11]
gi|294452961|gb|EFG21383.1| methionyl-tRNA formyltransferase [Enterococcus faecalis PC1.1]
gi|295114432|emb|CBL33069.1| methionyl-tRNA formyltransferase [Enterococcus sp. 7L76]
gi|300849030|gb|EFK76783.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TUSoD Ef11]
gi|306496793|gb|EFM66344.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0411]
gi|306503111|gb|EFM72368.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0860]
gi|306509635|gb|EFM78677.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0855]
gi|306513143|gb|EFM81777.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX4248]
gi|315031808|gb|EFT43740.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0017]
gi|315034824|gb|EFT46756.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0027]
gi|315144146|gb|EFT88162.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX2141]
gi|315146583|gb|EFT90599.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX4244]
gi|315150900|gb|EFT94916.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0012]
gi|315171199|gb|EFU15216.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1342]
gi|315172962|gb|EFU16979.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1346]
gi|315573271|gb|EFU85462.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0309B]
gi|315581155|gb|EFU93346.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0309A]
gi|327536240|gb|AEA95074.1| methionyl-tRNA formyltransferase [Enterococcus faecalis OG1RF]
gi|329576775|gb|EGG58268.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX1467]
Length = 313
Score = 170 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 102/307 (33%), Positives = 168/307 (54%), Gaps = 13/307 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L++L+ + + + +V TQP RP G R + V + A + +L
Sbjct: 1 MT-KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVG-RKKVITPTPVKEAALKHNL 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + D+ V A+G +P++IL A KLG N HASLLP++RG
Sbjct: 59 LVLQPEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ +I+ G+ ETG+ IM+M K +D G + R +PI+ + + ++LS+L ++
Sbjct: 119 APVHYSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + PQ+E T++ I++ + R+++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPKLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWPTAFTTY 238
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N K+ + PG +I IAC +G ++I RLQ AG L
Sbjct: 239 QGTNW----KIWAVTPLTETTTSAPGTIIQRSKKALWIACGEGTVLQIDRLQPAGKGQLT 294
Query: 294 IGDFLLG 300
I +FL G
Sbjct: 295 IQEFLNG 301
>gi|317062853|ref|ZP_07927338.1| methionyl-tRNA formyltransferase [Fusobacterium ulcerans ATCC
49185]
gi|313688529|gb|EFS25364.1| methionyl-tRNA formyltransferase [Fusobacterium ulcerans ATCC
49185]
Length = 311
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 86/312 (27%), Positives = 155/312 (49%), Gaps = 8/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT EFAV L +S + I+ +T+ +P RG K + V + A E ++P
Sbjct: 2 MRILFMGTPEFAVPCFDVL-NSEYEIIGAFTKVDKP-NMRGKKIKFTPVKEYALEHNIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P +E N D+ VVVAYG ++P+ I++ K G N H+SLLP++RGAAP
Sbjct: 60 YQPNSLKTEETQNIIKELNPDLIVVVAYGKILPKEIIDMPKYGVINVHSSLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G+ E+G+ IM + + LD G + I N L L L A A+++A
Sbjct: 120 INAALIHGEKESGVTIMYIAEELDAGDMILSVSTEIKDEDNFLTLHDRLKDLGAEALLKA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ P Q + T+ + K + ++++ ++ + N +R ++PFP A+ +
Sbjct: 180 VKLIEKEEAPRVQQNHSEATFVKPFKKEDCKIDWNKTEREIFNFVRGMNPFPSAYTTL-D 238
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + E+ EG GE+++ + G+V + ++ ++L D
Sbjct: 239 DKIFKIYGVKENFKSYEEGTAGEIVDIKKGAGVIVKTGNGSVILTEVKPENKKLLSGADI 298
Query: 298 LLGCPVIIGCIV 309
+ G + G +
Sbjct: 299 INGNVLKKGDKL 310
>gi|295696041|ref|YP_003589279.1| methionyl-tRNA formyltransferase [Bacillus tusciae DSM 2912]
gi|295411643|gb|ADG06135.1| methionyl-tRNA formyltransferase [Bacillus tusciae DSM 2912]
Length = 312
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 169/317 (53%), Gaps = 13/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT V+FMGT EFAV +L+ALV + + +V T+P RP GRR AV + A+E L
Sbjct: 1 MT-NVLFMGTPEFAVPSLKALVKAGWKVGAVVTRPDRPVGRR-QVPSPPAVKRAAEELGL 58
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P ++ E+ ++ +VAV AYG ++PQ +L+ G N HASLLPR+RGA
Sbjct: 59 PVWQPERVKDGEFLQRVRDLAPEVAVTAAYGRILPQELLDLPPRGCLNIHASLLPRYRGA 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQR +M G + TGI IMKM + LD GP+ ++ + + L + L+ L A +V
Sbjct: 119 APIQRCLMDGQDRTGITIMKMVQALDAGPIVAQEELAVGEEDDAGTLTERLAELGARLLV 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + + Q E+ TYA + + + ++++ ++A +HN IRAL P+ G +
Sbjct: 179 DVLPRWLAGEIEPREQDESLATYAPPLRREDEKIDWSQAALAIHNRIRALRPWAGGYT-- 236
Query: 240 MIGNKHERIKLLESQLVEGE---GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
++ + +K+ + + E G PGE++ +A GA+ + ++Q ++
Sbjct: 237 --LHRGKVLKIWRTTVEERTGSFGAPGEILVVERSGVLVAAGAGALWLHQVQPESKNRME 294
Query: 294 IGDFLLGCPVIIGCIVG 310
+ G + G +G
Sbjct: 295 AEAWARGRRIETGEALG 311
>gi|257468597|ref|ZP_05632691.1| methionyl-tRNA formyltransferase [Fusobacterium ulcerans ATCC
49185]
Length = 310
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 86/312 (27%), Positives = 155/312 (49%), Gaps = 8/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT EFAV L +S + I+ +T+ +P RG K + V + A E ++P
Sbjct: 1 MRILFMGTPEFAVPCFDVL-NSEYEIIGAFTKVDKP-NMRGKKIKFTPVKEYALEHNIPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P +E N D+ VVVAYG ++P+ I++ K G N H+SLLP++RGAAP
Sbjct: 59 YQPNSLKTEETQNIIKELNPDLIVVVAYGKILPKEIIDMPKYGVINVHSSLLPKYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G+ E+G+ IM + + LD G + I N L L L A A+++A
Sbjct: 119 INAALIHGEKESGVTIMYIAEELDAGDMILSVSTEIKDEDNFLTLHDRLKDLGAEALLKA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ P Q + T+ + K + ++++ ++ + N +R ++PFP A+ +
Sbjct: 179 VKLIEKEEAPRVQQNHSEATFVKPFKKEDCKIDWNKTEREIFNFVRGMNPFPSAYTTL-D 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + E+ EG GE+++ + G+V + ++ ++L D
Sbjct: 238 DKIFKIYGVKENFKSYEEGTAGEIVDIKKGAGVIVKTGNGSVILTEVKPENKKLLSGADI 297
Query: 298 LLGCPVIIGCIV 309
+ G + G +
Sbjct: 298 INGNVLKKGDKL 309
>gi|188995832|ref|YP_001930084.1| methionyl-tRNA formyltransferase [Porphyromonas gingivalis ATCC
33277]
gi|229487506|sp|B2RM92|FMT_PORG3 RecName: Full=Methionyl-tRNA formyltransferase
gi|188595512|dbj|BAG34487.1| putative methionyl-tRNA formyltransferase [Porphyromonas gingivalis
ATCC 33277]
Length = 323
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 104/318 (32%), Positives = 158/318 (49%), Gaps = 15/318 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR++FMGT++FAV L+ALV + + + +V T P +P G RG K S V AQE
Sbjct: 1 MKKEELRLIFMGTADFAVPALRALVENGYQVKAVVTMPDKPMG-RGHKVSPSMVKLYAQE 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P L +E + L +V ++P+ + +G N H SLLP +R
Sbjct: 60 LGLPILQPDNLNEESFLDELRTYQPHLQIVVAFRMLPRSVWQMPPMGTINLHGSLLPMYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI AI GD ETG+ ++ +DTG V K+PI L + ++ L A
Sbjct: 120 GAAPINHAIRHGDTETGVTTFRLRHEIDTGEVLLQEKLPIGHEETFGELYERMATLGASV 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGIT----YAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+V +D + PQ + A KI K + R+++ + AE VHN IR++SP P
Sbjct: 180 LVHTVDLFLEGEPVSIPQEQLPGYVGARPAPKIFKDDCRIDWDKPAEEVHNFIRSISPAP 239
Query: 234 GAWLEMMIGNKHERI-KLLESQLVE----GEGKPGEVI--NPNFTIACSQGAVRIMRLQR 286
AW ++ + K+ +Q++E G+ G +I N + +G +RI+ LQ
Sbjct: 240 TAWTKLHRPGMESIVLKIYRTQVIEREPRHRGRFGSIIWDKKNLDVMTRKGVIRILSLQM 299
Query: 287 AGGRVLDIGDFLLGCPVI 304
G + +D FL G +
Sbjct: 300 PGKKQMDAASFLNGFALS 317
>gi|86141625|ref|ZP_01060171.1| methionyl-tRNA formyltransferase [Leeuwenhoekiella blandensis
MED217]
gi|85832184|gb|EAQ50639.1| methionyl-tRNA formyltransferase [Leeuwenhoekiella blandensis
MED217]
Length = 321
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 105/310 (33%), Positives = 165/310 (53%), Gaps = 12/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT +FAVA LQ LV + ++V V T P RPAG RG K SAV K A LP
Sbjct: 4 LRIVFMGTPDFAVAGLQKLVENKLNVVGVITAPDRPAG-RGQKIQQSAVKKFALAHDLPV 62
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L PT L EE+ L +V ++PQ++ + G +N HASLLP +RGAAPI
Sbjct: 63 LQPTNLKAEEFLSELKALNANLQIVVAFRMLPQQVWQMPEFGTFNLHASLLPDYRGAAPI 122
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G ETG+ +D+ +DTG + F K+ I+ + N L L L + +++ +
Sbjct: 123 NWAIIKGAQETGVTTFFIDEKIDTGAIIFQEKLKIAPDENAGSLHDRLMHLGSDLILKTV 182
Query: 183 DKLEQNNLPLSPQI-ENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+EQ + + Q + + A K+++ T++++ + E ++NHIR LSP+P AW
Sbjct: 183 KAIEQGEVATTVQPKQEQLHTAYKLTRENTKIDWSKPVEAIYNHIRGLSPYPVAWTHFTN 242
Query: 242 GNKHERI-KLLESQLVE-------GEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRV 291
G+ E+ K+ ++ + G+ G +V N +A +R+ +Q +G +
Sbjct: 243 GDAKEQQLKVYKATITSAEQSQELGKEPIGKLKVFNDQLFVATENNWLRLDEIQLSGKKR 302
Query: 292 LDIGDFLLGC 301
+ + D L G
Sbjct: 303 MPVKDLLNGF 312
>gi|255067831|ref|ZP_05319686.1| methionyl-tRNA formyltransferase [Neisseria sicca ATCC 29256]
gi|255047922|gb|EET43386.1| methionyl-tRNA formyltransferase [Neisseria sicca ATCC 29256]
Length = 308
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 120/313 (38%), Positives = 173/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ S V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKG-RGMQLAPSPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ + G N H SLLPRWRGAA
Sbjct: 60 AQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDTPRHGCLNIHTSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L L A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMNLGAEAIVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ + Q E G+TYA+K+SK E R+N+ SA + IRA +P P AW+E
Sbjct: 180 DLQQLKTEDRLKSVKQPEEGVTYAQKLSKEEARINWSESAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ ++ V +GK GEV++ +AC + A++I LQ +G + + I
Sbjct: 240 QG----KPMKIWRAEAVAQQGKAGEVLSCSADGLVVACGENALKITELQPSGSKRMPIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G + +G ++
Sbjct: 296 FAAGHKIEVGTVL 308
>gi|312143912|ref|YP_003995358.1| methionyl-tRNA formyltransferase [Halanaerobium sp. 'sapolanicus']
gi|311904563|gb|ADQ15004.1| methionyl-tRNA formyltransferase [Halanaerobium sp. 'sapolanicus']
Length = 310
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 95/314 (30%), Positives = 165/314 (52%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT +FAV +L+ + S I +V TQP R G RG K SAV K A + LP
Sbjct: 1 MKIIFMGTPDFAVPSLRRIASDPEIEIAAVVTQPDRERG-RGQKVQFSAVKKTALDLELP 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L + +E + ++ +F D VVVA+G + + +L+ K G N HASLLP +RG++
Sbjct: 60 VLQSDNVNKEAFLDKLRAFQVDFVVVVAFGQKLSEELLDLPKEGCINLHASLLPEYRGSS 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI RAI+ G TG M M D G + + +++ I + L L+ + +++
Sbjct: 120 PIHRAIIDGRKITGNTTMYMGPGWDDGDIIYQQEIKIKRDDTVGDLHDRLAEEGSELLIK 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +++ P Q E+ T+A KI K +++ SAE+++N +R ++P+PGA+ +
Sbjct: 180 TLKDIKKGTAPRISQDEDKATFAYKIDKSLGEIDWSNSAEDIYNLVRGVNPWPGAYTHLK 239
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
RIK+ + ++ + + + G ++ + +G + I +LQ AG + L +
Sbjct: 240 GD----RIKIWQVEISDQQSDKEAGLILKADNNKILVQSGEGVIAIKKLQPAGAKKLSVS 295
Query: 296 DFLLGCPVIIGCIV 309
DFL G + G
Sbjct: 296 DFLNGYDLEPGQKF 309
>gi|186683788|ref|YP_001866984.1| methionyl-tRNA formyltransferase [Nostoc punctiforme PCC 73102]
gi|186466240|gb|ACC82041.1| methionyl-tRNA formyltransferase [Nostoc punctiforme PCC 73102]
Length = 343
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 105/341 (30%), Positives = 156/341 (45%), Gaps = 34/341 (9%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT +FAV TL+ L++ S +++V TQP + RG K S V A +L
Sbjct: 1 MKIVFFGTPQFAVPTLEKLLNHSKFDVLAVVTQPDKRRE-RGNKLTPSPVKAIATAHNLA 59
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ ++ + NADV VVVAYG ++ +IL KLG N H S+LP++RGA
Sbjct: 60 VWQPERVKKDTEILTKLKELNADVFVVVAYGQILSSKILKMPKLGCINVHGSILPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ + G+ ETGI M MD +DTGP+ + PI NT L + L+ + +V
Sbjct: 120 APIQWCLYNGEKETGITTMLMDVGMDTGPMLEIATTPIGLLDNTQDLAERLAAIGGDLLV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE- 238
E + KLE+ + PQ TYA I K +++ +SA +HN IR P A
Sbjct: 180 ETLLKLERQEIQPIPQDNLSATYAPLIQKENYGLDWSKSAMQLHNQIRGFYPNCTATFRN 239
Query: 239 ----------MMIGNKHERIKLLE---------------SQLVEGEGKPGEVIN--PNF- 270
+ R L KPG V+N
Sbjct: 240 NLLKIIASVPLASVGDVWRQAAPRLGNFPPELQELIDKLPDLSNVSNKPGVVVNITKGIG 299
Query: 271 -TIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ +G + + +Q AG R DF+ G + +G + G
Sbjct: 300 AIVQTGEGLLLLREVQLAGKRPQSGWDFVNGTRLTVGEVFG 340
>gi|295839958|ref|ZP_06826891.1| methionyl-tRNA formyltransferase [Streptomyces sp. SPB74]
gi|295827722|gb|EFG65556.1| methionyl-tRNA formyltransferase [Streptomyces sp. SPB74]
Length = 328
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 93/314 (29%), Positives = 150/314 (47%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E AV L AL++S H +V+V T+P PAG RG + V S V ++A+E +
Sbjct: 19 MRLVFAGTPEVAVPALDALIASEHHEVVAVVTRPDAPAG-RGRRLVASPVAQRAEEAGIE 77
Query: 62 A-LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ ++ D VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 78 ILRPAKPREESFLDRLREIAPDCCPVVAYGALLPRVALDVPAHGWVNLHFSLLPAWRGAA 137
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A++AGD TG + +++ LD+GPV + + L L+ + +
Sbjct: 138 PVQHAVLAGDEITGASTFLIEEGLDSGPVYGTVTETVRPTDTSGDLLTRLAFAGSGLLAA 197
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD + +L PQ G++ A K++ + RV++ A V +R +P PG W
Sbjct: 198 TMDGIADGSLKPVPQPAEGVSLAPKLTVEDARVDWAAPALRVDRVVRGCTPAPGPWTLF- 256
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+KL+ PGE+ + + V + +Q G + + D
Sbjct: 257 ---RGERLKLVSLTPAPEAPHLAPGEIRAGKNSVHVGTGSHPVELGWVQPQGKKPMRAAD 313
Query: 297 FLLGCPVIIGCIVG 310
+ G + G +G
Sbjct: 314 WARGTRLAPGETLG 327
>gi|84496643|ref|ZP_00995497.1| methionyl-tRNA formyltransferase [Janibacter sp. HTCC2649]
gi|84383411|gb|EAP99292.1| methionyl-tRNA formyltransferase [Janibacter sp. HTCC2649]
Length = 322
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 100/317 (31%), Positives = 151/317 (47%), Gaps = 10/317 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT E AV L+AL++S H +V+V T+P AG RG S V A E +
Sbjct: 1 MRLVFAGTPETAVPALEALLASPHEVVAVLTRPDARAG-RGRTLHPSPVKALAVERGIEV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P E+++ D VVAYG ++P +L+ G+ N H S+LP WRGAAP
Sbjct: 60 LTPVSPRDPEFQERLREIAPDACPVVAYGALLPPDVLDIPVHGWINLHFSVLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRAIMAGD TG ++ LDTGPV + I + + L L+ A +V
Sbjct: 120 VQRAIMAGDEATGATTFVIEAGLDTGPVLGLMTETIRPDDTSGVLLDRLAHAGAGLLVAT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
MD LE +L PQ G+++A K++ + + + A V H+R +P PGAW
Sbjct: 180 MDGLESGDLHAVPQPAEGVSHAAKLTTADAEITWTTPAYAVSRHVRGCTPAPGAWTTFRG 239
Query: 242 GNKHERIKL------LESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ LE++ PGEV + + G V + ++ G + +
Sbjct: 240 ERLGIGPFVVAGADALEARESSEPLSPGEVHVTKKAVHVGTASGVVTLGEVRPQGKKPMA 299
Query: 294 IGDFLLGCPVIIGCIVG 310
D+ G + ++G
Sbjct: 300 AADWARGVRIDAREVLG 316
>gi|241895668|ref|ZP_04782964.1| methionyl-tRNA formyltransferase [Weissella paramesenteroides ATCC
33313]
gi|241871035|gb|EER74786.1| methionyl-tRNA formyltransferase [Weissella paramesenteroides ATCC
33313]
Length = 331
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 106/313 (33%), Positives = 167/313 (53%), Gaps = 14/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+VFMGT +F+ LQ+L+ + + +V+V TQP RP G R + V + A + ++P L
Sbjct: 19 IVFMGTPDFSAPILQSLIDNPAYDVVAVLTQPDRPVG-RKHTLKPTPVKEVAVKANIPVL 77
Query: 64 VPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P K G +E +Q +S D + AYG +P ++L A K+G N HASLLP++RG API
Sbjct: 78 QPNKLSGSDEMKQIISLAPDFIITAAYGQFLPTKLLAAAKMGAINVHASLLPKYRGGAPI 137
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ GD +TG+ IM M K +D G + +++PI S NT L +LS+L ++ +
Sbjct: 138 HYAVLNGDEKTGVTIMYMVKEMDAGDIIAQKELPILSEDNTGTLFDKLSLLGRDLLLSTL 197
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
KL ++ PQ + ++++ I E ++F + A+ VHNH+R L PFP A +
Sbjct: 198 PKLISGDITPIPQNIDQVSFSPNIQPNEEVLDFTQPAQVVHNHVRGLFPFPIAHTTIKGT 257
Query: 243 NKHERIKLLESQLVE--GEGKPGEVINPN---FTIACSQG-AVRIMRLQRAGGRVLDIGD 296
R K+ ++ LV+ + PG V+ +A G + I LQ AG + I D
Sbjct: 258 ----RTKIQKTHLVDEKTDALPGTVVKKGKHELWLATGDGQVIAIDELQPAGKPKMTITD 313
Query: 297 FLLGC-PVIIGCI 308
+L G G
Sbjct: 314 YLNGHANFAEGDQ 326
>gi|256761052|ref|ZP_05501632.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T3]
gi|256682303|gb|EEU21998.1| methionyl-tRNA formyltransferase [Enterococcus faecalis T3]
Length = 314
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 101/307 (32%), Positives = 167/307 (54%), Gaps = 12/307 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M ++VFMGT F+V L++L+ + + + +V TQP RP G R + V + A + +L
Sbjct: 1 MMTKIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVG-RKKVITPTPVKEAALKHNL 59
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + D+ V A+G +P++IL A KLG N HASLLP++RG
Sbjct: 60 LVLQPEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGG 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ +I+ G+ ETG+ IM+M K +D G + R +PI+ + + ++LS+L ++
Sbjct: 120 APVHYSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + PQ+E T++ I++ + R+++ ++AE + N +R + P+P A+
Sbjct: 180 ETLPKLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWPTAFTTY 239
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N K+ + PG +I IAC +G ++I RLQ AG L
Sbjct: 240 QGTNW----KIWAVTPLTETTTSAPGTIIQRSKKVLWIACGEGTVLQIDRLQPAGKGQLT 295
Query: 294 IGDFLLG 300
I +FL G
Sbjct: 296 IQEFLNG 302
>gi|257882564|ref|ZP_05662217.1| methionyl-tRNA formyltransferase [Enterococcus faecium 1,231,502]
gi|294623687|ref|ZP_06702520.1| methionyl-tRNA formyltransferase [Enterococcus faecium U0317]
gi|257818222|gb|EEV45550.1| methionyl-tRNA formyltransferase [Enterococcus faecium 1,231,502]
gi|291596902|gb|EFF28120.1| methionyl-tRNA formyltransferase [Enterococcus faecium U0317]
Length = 312
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 163/308 (52%), Gaps = 14/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L+ L+ S + I +V TQP RP G R + V K A + +
Sbjct: 1 MT-KLVFMGTPAFSVPILEGLIESGYEIQAVVTQPDRPVG-RKRVITPTPVKKAALKHGI 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + DV V A+G +P+++L KLG N HASLLP++RG
Sbjct: 59 RVLQPEKISGSPEMEEIIELVPDVIVTAAFGQFLPEKLLQVPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ AIM G+ ETG+ IM+M K +D G + +PI+ + + ++LS+L ++
Sbjct: 119 APVHYAIMNGEKETGVTIMEMIKKMDAGGIYAQESIPITKQDDVGTMFEKLSLLGRKLLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ E+ T++ I++ + +++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPNIL-DGQKPVPQDESEATFSPNITREQEAIDWHKTAEEIDNQVRGMRPWPIAFTTY 237
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLD 293
R KLL +++ + PG +I N IAC Q + I LQ AG
Sbjct: 238 EG----IRWKLLSVEVLAETTDKAPGTIIRKDKKNLWIACGKQTVLAINELQPAGKGKQA 293
Query: 294 IGDFLLGC 301
+ DFL G
Sbjct: 294 VHDFLNGS 301
>gi|75909687|ref|YP_323983.1| methionyl-tRNA formyltransferase [Anabaena variabilis ATCC 29413]
gi|123731412|sp|Q3M7E8|FMT_ANAVT RecName: Full=Methionyl-tRNA formyltransferase
gi|75703412|gb|ABA23088.1| methionyl-tRNA formyltransferase [Anabaena variabilis ATCC 29413]
Length = 334
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 105/332 (31%), Positives = 159/332 (47%), Gaps = 25/332 (7%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT EFAV TL+ L+ + +++V TQP + RG K S V A LP
Sbjct: 1 MKIVFFGTPEFAVPTLEKLLLNQEFEVLAVVTQPDKRRE-RGNKLTPSPVKNMAIAHDLP 59
Query: 62 ALVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ ++ + +AD VVVAYG ++ Q+IL+ KLG N H S+LP++RGA
Sbjct: 60 VWQPERIKKDTETLNKLKQLDADAFVVVAYGQILSQKILDMPKLGCVNVHGSILPQYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ + G+ ETGI M MD +DTG + PI N + Q LSV+ ++
Sbjct: 120 APIQWCLYNGETETGITTMLMDAGMDTGAMLLKATTPIGLLDNADDVAQRLSVIGGDLLI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE- 238
E + KL+Q + PQ TYA I K + +++ RSA +HN IR P
Sbjct: 180 ETLYKLQQQEIQPIPQDNAAATYASLIQKQDYGLDWSRSALQLHNQIRGFYPNCTTTFRN 239
Query: 239 --------------MMIGNKHERIKLLE--SQLVEGEGKPGEVINPNFTIA----CSQGA 278
E K+L+ L + G PGEV++ + +G
Sbjct: 240 QPLKITASFPLGAAYNDELPPELQKMLQKLPDLSQISGSPGEVVSITKGVGAIAQTGEGL 299
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ + +Q G R DF+ G + +G ++G
Sbjct: 300 LLLREVQLPGKRPQSGWDFVNGTRLTVGEVLG 331
>gi|330720124|gb|EGG98528.1| Methionyl-tRNA formyltransferase [gamma proteobacterium IMCC2047]
Length = 317
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 115/304 (37%), Positives = 177/304 (58%), Gaps = 11/304 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT +FA ++L AL++S+H +V VYTQP RPAG RG K S V + A E +P
Sbjct: 6 PLRIVFAGTPDFAASSLAALLNSTHQLVGVYTQPDRPAG-RGRKLSASPVKQLALEHGIP 64
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L ++ + L D+ VVVAYGL++P+ IL KLG N HASLLPRWRGAA
Sbjct: 65 VYQPLSLKEDTEQDILKSLNADLMVVVAYGLILPKAILEIPKLGCINVHASLLPRWRGAA 124
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA++AGD E+G+ IM+MD LDTG + + PI+ + + L L+ L A ++E
Sbjct: 125 PIQRAVLAGDAESGVTIMQMDIGLDTGDMLLTKSCPINDDDTGSSLHDRLAKLGAECLLE 184
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L +PQ +N YA+K+ K + R+N+ +SA + +RA +P A+ E+
Sbjct: 185 ALIDLPTLQQQATPQDDNLANYADKLDKSQARINWQQSAVKIDRLVRAFDSWPVAFSEL- 243
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+R+++ ++ + +PG ++ + + IAC G +++ +Q G + L +
Sbjct: 244 ---DGQRVRIWQATASQQTHNTEPGTILCSNSESVDIACGSGVLKLQTVQLPGAKALPVS 300
Query: 296 DFLL 299
L
Sbjct: 301 AVLN 304
>gi|255011313|ref|ZP_05283439.1| methionyl-tRNA formyltransferase [Bacteroides fragilis 3_1_12]
gi|313149123|ref|ZP_07811316.1| methionyl-tRNA formyltransferase [Bacteroides fragilis 3_1_12]
gi|313137890|gb|EFR55250.1| methionyl-tRNA formyltransferase [Bacteroides fragilis 3_1_12]
Length = 324
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 109/318 (34%), Positives = 163/318 (51%), Gaps = 14/318 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A +
Sbjct: 1 MKKEDLRIVYMGTPDFAVEALRCLVEGGYNVVGVITMPDKPAG-RGHKIQYSPVKQYALD 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P KL E+ Q L +V ++P+ + N + G +N HASLLP++R
Sbjct: 60 HQLPLLQPEKLKDAEFVQALREWKADLQIVVAFRMLPEVVWNMPRFGTFNLHASLLPQYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V +VPI+ N + +L L
Sbjct: 120 GAAPINWAVINGDTETGITTFFLKHEIDTGEVIQQVRVPIADTDNVEVVHDKLMQLGGRL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
++E +D + + N+ PQ E + A KI K R+N+ + + V++ IR LSP+P
Sbjct: 180 VIETVDAILEGNVKAIPQEEMAVVGELRPAPKIFKETCRINWNQPVKRVYDFIRGLSPYP 239
Query: 234 GAWLEMMIG-NKHERIKLLESQLVE--GEGKPGEVINPN---FTIACSQGAVRIMRLQRA 287
AW E++ + +K+ ES+ E PG +I +A S G V I+ LQ
Sbjct: 240 AAWSELLNPEGEAVVVKIFESEKEEKVHALTPGSIITDGKHFLKVAVSDGFVNILSLQLP 299
Query: 288 GGRVLDIGDFLLGCPVII 305
G + L + L G +
Sbjct: 300 GKKRLKTDELLRGFHLTE 317
>gi|170694014|ref|ZP_02885170.1| methionyl-tRNA formyltransferase [Burkholderia graminis C4D1M]
gi|170141086|gb|EDT09258.1| methionyl-tRNA formyltransferase [Burkholderia graminis C4D1M]
Length = 328
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 121/321 (37%), Positives = 166/321 (51%), Gaps = 15/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRVVF GT EFA A L A+ + ++ V TQP RPAG RG+K S V + A E +
Sbjct: 4 SLRVVFAGTPEFASAALAAIHGAGFAVPLVLTQPDRPAG-RGMKLQASPVKRYAVEHGIA 62
Query: 62 ALVPTKLGQEEYE---------QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + Q + DV VV AYGL++PQ +L+ G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAAAAIEQLRATPHDVMVVAAYGLILPQEVLDIATHGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETGI +M+MD LDTG + + PIS++ TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGITLMQMDAGLDTGAMISEIRTPISADDTTATLHDRLAQ 182
Query: 173 LCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A + ++ L +PQ +G+TYAEKI K E +++ R A + +RA P
Sbjct: 183 AGAKLIVEALVELERSGKLASTPQPADGVTYAEKIGKHEAALDWRRPAAVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + +I +Q PG + +AC +GA+R+ +LQ+ G
Sbjct: 243 FPGGVATLED-GTAIKIWAAAAQDSTNNAAPGTITGVSPEGVVVACGEGALRLTQLQKPG 301
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G + G
Sbjct: 302 GKRLPAREFLAGFGLAAGQRF 322
>gi|116328326|ref|YP_798046.1| methionyl-tRNA formyltransferase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116331052|ref|YP_800770.1| methionyl-tRNA formyltransferase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|122281198|sp|Q04SV8|FMT_LEPBJ RecName: Full=Methionyl-tRNA formyltransferase
gi|122283885|sp|Q050Y2|FMT_LEPBL RecName: Full=Methionyl-tRNA formyltransferase
gi|116121070|gb|ABJ79113.1| Methionyl-tRNA formyltransferase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116124741|gb|ABJ76012.1| Methionyl-tRNA formyltransferase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 315
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 89/316 (28%), Positives = 142/316 (44%), Gaps = 9/316 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++ + GT E + L+AL+ S+ ++ V T P RP G R K+ V K A E +P
Sbjct: 1 MKIGYFGTPEHSAKLLKALIDSTLAEVLFVVTNPDRPKG-RNKKTEAGPVKKTALEHHIP 59
Query: 62 ALVPTKLGQEEYE---QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ +E+ + F SF AD+ VV AYG ++P+ + L N H SLLP RG
Sbjct: 60 VFQYESIKREKEKALSDFGSFPADLYVVFAYGSILPKEVYECPPLSSINLHGSLLPDLRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+P+Q A+ G + +GI I + + +D G + +K+ I NT L +++ ++
Sbjct: 120 ASPVQTALWKGYSASGITIQYIGEKMDEGDILLSQKIDIIPEDNTETLMNKITDAGTESI 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + + P PQ TY KI + +++ AE +HN IRAL P A
Sbjct: 180 LRLLKAYDGKPFPAIPQNHAKATYCGKIKSEDRILDWSLGAEELHNRIRALYPDAIATTR 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEV---INPNFTIACSQG-AVRIMRLQRAGGRVLDI 294
L S +E +PG++ C G + I+ LQ +
Sbjct: 240 FREKRIGILKTKLSSLSIESNPEPGKLKRLDKKGLLTQCGDGRFLEILELQPENKNRMSA 299
Query: 295 GDFLLGCPVIIGCIVG 310
DFL G + G G
Sbjct: 300 SDFLNGFRIQEGETFG 315
>gi|34541612|ref|NP_906091.1| methionyl-tRNA formyltransferase [Porphyromonas gingivalis W83]
gi|39931197|sp|Q7MTE3|FMT_PORGI RecName: Full=Methionyl-tRNA formyltransferase
gi|34397930|gb|AAQ66990.1| methionyl-tRNA formyltransferase [Porphyromonas gingivalis W83]
Length = 323
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 104/318 (32%), Positives = 158/318 (49%), Gaps = 15/318 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR++FMGT++FAV L+ALV + + + +V T P +P G RG K S V AQE
Sbjct: 1 MKKEELRLIFMGTADFAVPALRALVENGYQVKAVVTMPDKPMG-RGHKVSPSMVKLYAQE 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P L +E + L +V ++P+ + +G N H SLLP +R
Sbjct: 60 LGLPILQPDNLNEESFLDELRTYQPHLQIVVAFRMLPRSVWQMPPMGTINLHGSLLPMYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI AI GD ETG+ ++ +DTG V K+PI L + ++ L A
Sbjct: 120 GAAPINHAIRHGDTETGVTTFRLRHEIDTGEVLLQEKLPIGHEETFGELYERMATLGASV 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGIT----YAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+V +D + PQ + A KI K + R+++ + AE VHN IR++SP P
Sbjct: 180 LVHTVDLFLEGEPVSIPQEQLPGYVDARPAPKIFKDDCRIDWDKPAEEVHNFIRSISPAP 239
Query: 234 GAWLEMMIGNKHERI-KLLESQLVE----GEGKPGEVI--NPNFTIACSQGAVRIMRLQR 286
AW ++ + K+ +Q++E G+ G +I N + +G +RI+ LQ
Sbjct: 240 TAWTKLHRPRMESIVLKIYRTQVIEREPRHRGRFGSIIWDKKNLDVMTRKGVIRILSLQM 299
Query: 287 AGGRVLDIGDFLLGCPVI 304
G + +D FL G +
Sbjct: 300 PGKKQMDAASFLNGFALS 317
>gi|332520713|ref|ZP_08397175.1| methionyl-tRNA formyltransferase [Lacinutrix algicola 5H-3-7-4]
gi|332044066|gb|EGI80261.1| methionyl-tRNA formyltransferase [Lacinutrix algicola 5H-3-7-4]
Length = 318
Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats.
Identities = 96/310 (30%), Positives = 167/310 (53%), Gaps = 10/310 (3%)
Query: 1 MT----LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ 56
M+ LR+VFMGT +FAV L L+ ++IV V T P +PAG RG K SAV + A+
Sbjct: 1 MSNNKELRIVFMGTPDFAVTILSKLLEHDYNIVGVITAPDKPAG-RGRKLNKSAVKEFAE 59
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+L L PT L E + + L +V ++P+ + K G +N HASLLP +
Sbjct: 60 TKNLNILQPTNLKSEAFTKTLKILNANLQIVVAFRMLPKVVWQMPKYGTFNLHASLLPNY 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPI AI+ G+ +TG++ +D+ +DTG + +V I S+ N L +L + +
Sbjct: 120 RGAAPINWAIINGETKTGVSTFFIDEKIDTGAMILQEEVKIESDENAGSLHDKLMHIGSD 179
Query: 177 AMVEAMDKLEQNNLPLSPQIEN-GITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
+++ ++ +E + +PQ E+ A K++K ++N+ + ++N IR LSP+P A
Sbjct: 180 LVIKTVNHIENGTVETTPQPEDAISKTAYKLNKDNCKINWEDNINTIYNKIRGLSPYPAA 239
Query: 236 WLEMMIGNKHERIKLLES--QLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRV 291
W ++ G+ +K+ + ++ E + G +I +A +G ++I+ ++ G R
Sbjct: 240 WSKLHNGDDLLDVKIYRAEKEIAIHEFETGLIISTKKEVKVAVKEGYIKILDIKLPGKRT 299
Query: 292 LDIGDFLLGC 301
+++ L G
Sbjct: 300 MEVKSLLNGY 309
>gi|291167034|gb|EFE29080.1| methionyl-tRNA formyltransferase [Filifactor alocis ATCC 35896]
Length = 317
Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 101/316 (31%), Positives = 164/316 (51%), Gaps = 14/316 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT EFAVA+L+ L +V V +Q +P G RG K V + V +KA E+
Sbjct: 1 MRVIFMGTPEFAVASLEVLHDRKDDVVLVVSQQDKPKG-RGKKLVPTPVKQKALEYGYEV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ E L DV VV AYG ++ Q +L+ K G N HASLLP++RGAAP
Sbjct: 60 YQPEKVKDAESIALLKSLEPDVIVVTAYGQILSQELLDIPKYGCINVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ +TGI M MD LDTG + +V ++ + + L ++L A+ +
Sbjct: 120 IQFALLHGEQKTGITTMMMDVGLDTGDMLVKEEVELTEDDTLSTLSKKLMDAGQIALHKT 179
Query: 182 MDKLEQN--NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+++LEQ +P Q + YA +++ +++ ++A + N IRA+ +P A
Sbjct: 180 LEQLEQYGREIPREKQNDEDSCYASMLTREMGYIDWSKTAREIKNQIRAVEGWPSAVTFY 239
Query: 240 MIGNKHERIKLLESQLVEGEGK---PGEV---INPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ E++KL + ++ E K PG + +A V+I +Q + ++
Sbjct: 240 ----RREKVKLFQVEITPEESKEIVPGTITEVTKKYLKVATGDVFVKIFEVQFPNKKRME 295
Query: 294 IGDFLLGCPVIIGCIV 309
+ +LLG + G I
Sbjct: 296 VSAYLLGNTIEEGEIF 311
>gi|323142779|ref|ZP_08077492.1| methionyl-tRNA formyltransferase [Succinatimonas hippei YIT 12066]
gi|322417424|gb|EFY08045.1| methionyl-tRNA formyltransferase [Succinatimonas hippei YIT 12066]
Length = 312
Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 113/317 (35%), Positives = 182/317 (57%), Gaps = 14/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ +++F GT +FA L+AL+ + +VYTQP RPAG RG K S V + A ++
Sbjct: 1 MS-KIIFAGTPDFAAVHLKALIDAGIIPCAVYTQPDRPAG-RGHKLTPSPVKELALLHNI 58
Query: 61 PALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P +E+ ++FLSFNAD+A+VVAYG+++P I++ KLG N H SLLP +RGA
Sbjct: 59 EVLTPENFKNKEDVDKFLSFNADLAIVVAYGVILPDSIVHGPKLGCINVHGSLLPAYRGA 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRA++ G++ TG+ IMK+ K LD G + ++PIS++ + L +L+ L A +V
Sbjct: 119 APIQRALLDGNDRTGVTIMKIVKELDAGDMLIKAEIPISADDTSGSLFDKLASLGAKTLV 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + + Q + TYA+KI+K E R+NF SAEN + IR L+P+P A +
Sbjct: 179 DNLPDILAEKITAKKQDPSLATYAKKITKEEARLNFNDSAENCNLKIRGLNPWPIANASI 238
Query: 240 MIGNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ K+ +++++ +PG +I ++AC++GAV + +Q G ++
Sbjct: 239 ----DNIVFKIFKAKVLNDNQGKEPGTIISVDKKGISVACAEGAVCLEIIQAPGKGRVNA 294
Query: 295 GDFLLGCP--VIIGCIV 309
DF +G
Sbjct: 295 ADFARSRSDIFSVGKKF 311
>gi|237712467|ref|ZP_04542948.1| methionyl-tRNA formyltransferase [Bacteroides sp. 9_1_42FAA]
gi|237726658|ref|ZP_04557139.1| methionyl-tRNA formyltransferase [Bacteroides sp. D4]
gi|229435184|gb|EEO45261.1| methionyl-tRNA formyltransferase [Bacteroides dorei 5_1_36/D4]
gi|229453788|gb|EEO59509.1| methionyl-tRNA formyltransferase [Bacteroides sp. 9_1_42FAA]
Length = 324
Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 98/311 (31%), Positives = 162/311 (52%), Gaps = 11/311 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+V+MGT +FAV +L+ LV +++V V T P +P GR G S V + A L
Sbjct: 6 LRIVYMGTPDFAVESLKRLVEGGYNVVGVITMPDKPMGRHGSVLQPSPVKEYAVSQGLRV 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E + + L +V ++P+ + N +LG +N HASLLP++RGAAPI
Sbjct: 66 LQPEKLKDEAFVEELRSLQADLQIVVAFRMLPEIVWNMPRLGTFNLHASLLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ GD ETGI + +DTG + +VPI+ N + +L L ++E +
Sbjct: 126 NWAVINGDTETGITTFFLKHEIDTGEIIQQVRVPIADTDNVEIVHDKLMYLGGDLVLETV 185
Query: 183 DKLEQNNLPLSPQIE-----NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
D + ++ PQ + A KI K R+++ + + +++ IR LSP+P AW
Sbjct: 186 DAILDGSVKPVPQENLIRQETELRPAPKIFKETCRIDWNKGVKQIYDFIRGLSPYPAAWT 245
Query: 238 EMMI-GNKHERIKLLESQL--VEGEGKPGEV---INPNFTIACSQGAVRIMRLQRAGGRV 291
E+ + + +K+ E++ V E G++ + F +A G + ++ LQ AG +
Sbjct: 246 ELCVADGTRQVLKIYETEKVFVSHEMNIGDIRTDMKTYFQVAVKDGFINVLTLQLAGKKR 305
Query: 292 LDIGDFLLGCP 302
+++ DFL G
Sbjct: 306 MNVADFLRGYR 316
>gi|257083203|ref|ZP_05577564.1| methionyl-tRNA formyltransferase [Enterococcus faecalis Fly1]
gi|256991233|gb|EEU78535.1| methionyl-tRNA formyltransferase [Enterococcus faecalis Fly1]
Length = 313
Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 102/307 (33%), Positives = 168/307 (54%), Gaps = 13/307 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L++L+ + + + +V TQP RP G R + V + A + +L
Sbjct: 1 MT-KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVG-RKKVITPTPVKEAALKHNL 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + D+ V A+G +P++IL A KLG N HASLLP++RG
Sbjct: 59 LVLQPEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ +I+ G+ ETG+ IM+M K +D G + R +PI+ + + ++LS+L ++
Sbjct: 119 APVHYSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + PQ+E T++ I++ + R+++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPKLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWPTAFTTY 238
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N K+ + PG +I IAC +G ++I RLQ AG L
Sbjct: 239 QGTNW----KIWAVTPLTETTTSDPGTIIQRSKKALWIACGEGTVLQIDRLQPAGKGQLT 294
Query: 294 IGDFLLG 300
I +FL G
Sbjct: 295 IQEFLNG 301
>gi|86132757|ref|ZP_01051349.1| Methionyl-tRNA formyltransferase [Dokdonia donghaensis MED134]
gi|85816711|gb|EAQ37897.1| Methionyl-tRNA formyltransferase [Dokdonia donghaensis MED134]
Length = 316
Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 96/309 (31%), Positives = 156/309 (50%), Gaps = 7/309 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT EFAV L L+ +++V V T P RPAG RG K S V A+ +L
Sbjct: 4 LRIVFMGTPEFAVTILHGLLDEGYNVVGVITAPDRPAG-RGQKIRESDVKAFAKARNLNI 62
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L PT L E + + L +V ++P+ + G +N HASLLP++RGAAPI
Sbjct: 63 LQPTNLKSESFLEELEALKANLQIVVAFRMLPEAVWKMPAYGTFNLHASLLPQYRGAAPI 122
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ ETG+ +D+ +DTG + + I N L L + +++ +
Sbjct: 123 NWAIINGETETGVTTFFIDEKIDTGEIILQESLAIDDKENAGHLHDRLMIAGKELVIKTV 182
Query: 183 DKLEQNNLPLSPQIENGI-TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+E++ + Q + A K+ TR+N+ + ++NHIR LSP+P A+ +
Sbjct: 183 KAIERDEVKTHIQDSSKELKTAYKLHSENTRINWDAPLQEIYNHIRGLSPYPAAYTILEN 242
Query: 242 GNKHERIKLLE--SQLVEGEGKP-GEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
G K +R+K+ ++ + P G V ++ + IA +G + I +Q +G + + + D
Sbjct: 243 GGKEQRVKIYSAFAKADKEMLIPSGAVTQVDDHLAIATPEGYICITEMQLSGKKKMAVKD 302
Query: 297 FLLGCPVII 305
L G
Sbjct: 303 LLNGYKFDK 311
>gi|209526861|ref|ZP_03275381.1| methionyl-tRNA formyltransferase [Arthrospira maxima CS-328]
gi|209492732|gb|EDZ93067.1| methionyl-tRNA formyltransferase [Arthrospira maxima CS-328]
Length = 327
Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats.
Identities = 101/327 (30%), Positives = 150/327 (45%), Gaps = 21/327 (6%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT EFAV +LQ L+ +V V TQP + G RG K+ S V A LP
Sbjct: 1 MRLVFFGTPEFAVPSLQRLLTDEQFQVVGVVTQPDKRRG-RGSKTSPSPVKAIALCAGLP 59
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P +L ++ ADV VVVAYG ++ +L KLG N H S+LP++RGA
Sbjct: 60 VWQPRRLKKDPQTLANLREVEADVFVVVAYGQILSPELLQIPKLGCVNAHGSILPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ + G+ ETGI M M++ +DTGP+ PIS A L + L+ + A +
Sbjct: 120 APIQWCLYHGETETGITTMLMNEGMDTGPMLLKSYTPISWEDQAANLAERLANMAAELLT 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + ++ + PQ + T A I + ++++ +SA +HN IRA P
Sbjct: 180 ETLLQMRSQTIQPIPQDDTQATLAPLIQPEDYQLDWSKSAVALHNQIRAFYPHCVTTFRG 239
Query: 240 MIGNKHERIKLLESQLVE-------------GEGKPGEVI----NPNFTIACSQGAVRIM 282
+ L +E G GE++ + G + +
Sbjct: 240 QSLKISGSVPLGSVPQIELPPPLARLSTADLNPGNIGEIVAIAKRFGPIVQTGSGYLLVS 299
Query: 283 RLQRAGGRVLDIGDFLLGCPVIIGCIV 309
++ G RV DF+ G V IG I+
Sbjct: 300 EVKLPGKRVQSGWDFVNGTRVAIGEIL 326
>gi|206901652|ref|YP_002251153.1| methionyl-tRNA formyltransferase [Dictyoglomus thermophilum H-6-12]
gi|238065949|sp|B5YF45|FMT_DICT6 RecName: Full=Methionyl-tRNA formyltransferase
gi|206740755|gb|ACI19813.1| methionyl-tRNA formyltransferase [Dictyoglomus thermophilum H-6-12]
Length = 312
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 161/313 (51%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV++ GT EF+ L+ + +I+ + TQP +P G RG K + S V + A +
Sbjct: 1 MRVIYFGTPEFSRIILEKIYD-HLNIIGIVTQPDKPKG-RGKKILPSPVKQFAINKGITV 58
Query: 63 LVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K E + D +V +YG +IP+ ILN G N HAS+LP++RGAA
Sbjct: 59 YQPEKLKGNIEFFNIIKDLKPDALIVASYGKIIPEDILNIPPYGGINVHASILPKYRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI+RA+M + ETG++IMKM+K LDTGPV ++K+PI + + L +L+ L A ++E
Sbjct: 119 PIERALMNCEKETGVSIMKMEKGLDTGPVYAIKKIPILPDDDKGTLSIKLANLGADLLLE 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +++ L PQ E+ +YA K++K E +N+ E + IRALSP PGA
Sbjct: 179 VLPLIKEGKLIPVPQDESLASYAPKLTKEEEIINWNMDGEKICCQIRALSPEPGAMTFFR 238
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
E + + + G +I + G + ++ LQ G + ++ +
Sbjct: 239 GKILKVFKANFEKRFFDEDVINGTIIEQDRKKGIGVKVENGILWLLELQPEGKKKMNFLE 298
Query: 297 FLLGCPVIIGCIV 309
F+ G + IG
Sbjct: 299 FMNGYRLNIGERF 311
>gi|258648511|ref|ZP_05735980.1| methionyl-tRNA formyltransferase [Prevotella tannerae ATCC 51259]
gi|260851277|gb|EEX71146.1| methionyl-tRNA formyltransferase [Prevotella tannerae ATCC 51259]
Length = 322
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 9/310 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLR+V+ GT EFAV +L+ LV ++IV V T P +P GR SAV A+ LP
Sbjct: 5 TLRIVYFGTPEFAVESLKRLVDGGYNIVGVVTMPDKPIGRHQSILSKSAVKIFAEAHGLP 64
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P L ++ L VV ++P+ + + G +N HA+LLP++RGAAP
Sbjct: 65 LLQPASLKDPDFLTQLKAWQADVQVVVAFRMLPEVVWAMPRFGTFNLHAALLPQYRGAAP 124
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ ETGI + +DTG V +VPIS + L +L ++E
Sbjct: 125 INWAIINGERETGITTFFLQHEIDTGNVIQQVRVPISDTDTAGDIHDRLMLLGGDLVIET 184
Query: 182 MDKLEQNNLPLSP----QIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
++KL + ++ P Q + + A K+ K ++++ + ++HIR LSP+P AW
Sbjct: 185 INKLIEGDIEAIPQAEMQTDEPLKPAPKLFKDNCKIDWSAGVKRCYDHIRGLSPYPAAWT 244
Query: 238 EMMIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+ G K + +K++ S+ G +I + +A S G + + +Q AG + L
Sbjct: 245 TFVSGEKQQALKIISSEKEFCTPAAPVGTIIIADKADLKVALSDGYLHLKEIQPAGKKRL 304
Query: 293 DIGDFLLGCP 302
+ DFL G
Sbjct: 305 PVADFLRGFR 314
>gi|307566306|ref|ZP_07628748.1| methionyl-tRNA formyltransferase [Prevotella amnii CRIS 21A-A]
gi|307345000|gb|EFN90395.1| methionyl-tRNA formyltransferase [Prevotella amnii CRIS 21A-A]
Length = 340
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 90/328 (27%), Positives = 160/328 (48%), Gaps = 27/328 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT EFAV +L++LV ++ ++V+V TQP +P GR S V + A +LP
Sbjct: 6 LRIVFMGTPEFAVESLKSLVENNFNVVAVVTQPDKPVGRHQDHLQSSPVKQYALAHNLPV 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L KL +E++ L +V ++P+ + +LG +N HA+LLP++RGAAPI
Sbjct: 66 LQAEKLKEEQFLSTLRAYKADIQIVVAFRMLPEVVWAMPRLGTFNVHAALLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ +TG+ +DK++DTG + R+ PI + + L L A ++ +
Sbjct: 126 NWAIINGEKKTGVTTFFLDKNIDTGRMILQREFPIPDEADVEYVYNGLMRLGAEIAIDTV 185
Query: 183 DKLEQNNLPLS---------------PQ-IENGITYAEKISKGETRVNFCRSAENVHNHI 226
+ + PQ E + A KI K R+ + A+ +++ +
Sbjct: 186 SYILKQLPDNCLEGINFSKVLDKISTPQVNEESLHKAPKIFKETCRICWNAEAKKIYDFV 245
Query: 227 RALSPFPGAWL-------EMMIGNKHERIKLLESQLV--EGEGKPGEVI--NPNFTIACS 275
R LSP+PG W + + +K+ ++ E +PG ++ + + +
Sbjct: 246 RGLSPYPGTWTTMLLLDDTLKTSKNNIVLKVFKTAKTMRIAESEPGTLLVEKGHLYVNTT 305
Query: 276 QGAVRIMRLQRAGGRVLDIGDFLLGCPV 303
+ ++ +Q G + +D+ FL G +
Sbjct: 306 DYLLELLDMQLPGKKRMDVKSFLNGFKM 333
>gi|168211477|ref|ZP_02637102.1| methionyl-tRNA formyltransferase [Clostridium perfringens B str.
ATCC 3626]
gi|170710513|gb|EDT22695.1| methionyl-tRNA formyltransferase [Clostridium perfringens B str.
ATCC 3626]
Length = 317
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 93/318 (29%), Positives = 161/318 (50%), Gaps = 13/318 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV +L+ ++ ++ ++ TQP +P+G RG K +S + K +P
Sbjct: 1 MKIVFMGTPDFAVPSLKKMIE-KFNVSAIVTQPDKPSG-RGKKVSISPIKKVGLSNEIPI 58
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ + D +VVAYG ++ + IL+ +LG HASLLP +RG+A
Sbjct: 59 FQPEKIRTDSVIINKLKELKPDFIIVVAYGQILTKEILDIPRLGCICLHASLLPMYRGSA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI ++ G+ +TG + MD +DTG + +V IS ++ L L + A + E
Sbjct: 119 PINWCLINGETKTGNTTILMDTGIDTGDMLMRSEVEISESMTAGELYNLLKINGAELLEE 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA----W 236
++ + + Q +G +Y + ++K ++N+ S+ N+HN IR LS +P W
Sbjct: 179 TINGIITGKICGVKQPNDGSSYVKMLNKQMAKINWNDSSTNIHNLIRGLSSWPYKNINSW 238
Query: 237 LEMMIGNKHERIKLLESQLVEGE--GKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRV 291
K K+ +S+ +E PG +I+ +A G + I LQ GG+
Sbjct: 239 PTAYTYYKDIPFKIFKSKSLEANIIDPPGCIIDANDEGIKVATKNGILIIEILQFPGGKP 298
Query: 292 LDIGDFLLGCPVIIGCIV 309
L++ +FL G + G I+
Sbjct: 299 LEVKEFLKGNKIEKGIIL 316
>gi|254519242|ref|ZP_05131298.1| methionyl-tRNA formyltransferase [Clostridium sp. 7_2_43FAA]
gi|226912991|gb|EEH98192.1| methionyl-tRNA formyltransferase [Clostridium sp. 7_2_43FAA]
Length = 308
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 94/310 (30%), Positives = 156/310 (50%), Gaps = 14/310 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT EFAV +L+ ++ ++ + SV+TQP +P G RG K S V A E ++
Sbjct: 1 MKIVFMGTPEFAVPSLKKIIE-TYGVESVFTQPDKPKG-RGKKMAYSPVKDVALENNIKV 58
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL ++ E D +VVA+G ++ + +L+ K G N HASLLP +RGAA
Sbjct: 59 FQPVKLKEDTEALEYLKELKPDFIIVVAFGQILTKEVLDIPKYGCINLHASLLPMYRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ A++ G+ ++G M MD LDTG + +V I+ N+ L L A ++
Sbjct: 119 PLNWAVIKGEKKSGNTTMLMDVGLDTGDMLLKDEVEITDNMTAGELHDVLMDRGAELLIN 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D L ++ Q E R+N+ SA+++HN IR L+P+P A
Sbjct: 179 TIDGLYNGSIIPEKQSEETFYAKMLNK-ELGRINWNNSAKDIHNLIRGLNPWPIAHTTYD 237
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ K+ ES+++ +PG +I ++ G + I ++Q G+ L I
Sbjct: 238 DKSM----KIYESEVLCENSNKEPGTIINVSKEGMKVSTGSGVLLIKKIQFPNGKPLTIE 293
Query: 296 DFLLGCPVII 305
++ G + I
Sbjct: 294 QYINGNELEI 303
>gi|254424539|ref|ZP_05038257.1| methionyl-tRNA formyltransferase [Synechococcus sp. PCC 7335]
gi|196192028|gb|EDX86992.1| methionyl-tRNA formyltransferase [Synechococcus sp. PCC 7335]
Length = 333
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 100/333 (30%), Positives = 154/333 (46%), Gaps = 26/333 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT +FAV +L L++ S +V++ TQP + G RG K S V A P
Sbjct: 1 MRIVFFGTPQFAVPSLTRLLNHSDFEVVAIVTQPDKRRG-RGGKVSPSPVKAAALRAECP 59
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ ++ + + NAD VV+AYG ++ Q IL+ LG N H S+LP +RGA
Sbjct: 60 IWQPGRIKKDTETLARLNALNADAFVVIAYGQILSQEILDMPSLGCINAHGSILPAYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ + G+ ETG+ M MD +DTGP+ +PI N L Q+LS L A +V
Sbjct: 120 APIQWCLHNGEIETGVTTMLMDAGMDTGPMLLKETLPIELTDNAWQLAQKLSELSADLLV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ KL Q + + Q TYA I K + +++ SA+ +H+ +R P
Sbjct: 180 STLQKLNQQLIRPTAQDGGRATYAPLIKKEDYLLDWSASAKAIHDKVRGFYPNCTTQFRE 239
Query: 240 MIGNKH------------------ERIKLLESQLVEGEGKPGEVINP----NFTIACSQG 277
L ES ++ PG VI+ + G
Sbjct: 240 NDLKVMTTLPLGSAYQSQFPAELSRIHSLYESNAIKENAAPGTVISILKNYGPVVQTGSG 299
Query: 278 AVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ ++ ++ G + L DF G + IG ++G
Sbjct: 300 PLLLLEVKPVGKKALAGRDFANGSRIEIGEVLG 332
>gi|195978661|ref|YP_002123905.1| methionyl-tRNA formyltransferase [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195975366|gb|ACG62892.1| methionyl-tRNA formyltransferase Fmt [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 305
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 93/309 (30%), Positives = 152/309 (49%), Gaps = 11/309 (3%)
Query: 8 MGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MGT +F+ LQ L+ + + I++V TQP R G R ++ V K A LP P
Sbjct: 1 MGTPQFSATVLQGLLENPAYDILAVVTQPDRAVG-RKKDITMTPVKKLALAHQLPVFQPE 59
Query: 67 KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
KL + + +V A +L + N HASLLP++RG API AI
Sbjct: 60 KLSGSQELADIMALGADGIVTAAFGQFLPTVLLDSVTFAVNVHASLLPKYRGGAPIHYAI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ GD E G+ IM+M K +D G + +PI N + +L++L +++ +
Sbjct: 120 INGDKEAGVTIMEMVKEMDAGDMISSASLPILDTDNVGTMFDKLAILGRDLLLKTLPDYL 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+L PQ + T++ +S E R+++ + A V NHIR ++P+P A + +
Sbjct: 180 SGDLKPVPQDHSQATFSPNLSAEEERLDWSKPAREVFNHIRGMNPWPVAHTLL----DGQ 235
Query: 247 RIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL--GC 301
R K+ E++L EG G G++I +A +GA+ + +Q AG + I DFL G
Sbjct: 236 RFKIYEAELAEGSGSAGQIISKTKKALVVAAGEGALSLTLVQPAGKPKMPIVDFLNGVGR 295
Query: 302 PVIIGCIVG 310
+ +G ++G
Sbjct: 296 GLEVGDVLG 304
>gi|67925158|ref|ZP_00518530.1| Methionyl-tRNA formyltransferase [Crocosphaera watsonii WH 8501]
gi|67853005|gb|EAM48392.1| Methionyl-tRNA formyltransferase [Crocosphaera watsonii WH 8501]
Length = 331
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 107/331 (32%), Positives = 166/331 (50%), Gaps = 25/331 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++V+F GT +FAV TLQ L+ S +++ V TQP + G RG + + SAV K A ++P
Sbjct: 1 MQVIFFGTPQFAVPTLQKLLDHSRFNVIGVVTQPDKRRG-RGKQLIPSAVKKIALNHNIP 59
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ +++ Q + AD VVVAYG ++ IL K+G N H S+LP++RGA
Sbjct: 60 IWQPKRIKKDQDTLSQLKNSQADAFVVVAYGQILSLEILQMPKVGAINVHGSILPQYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ + GD +TGI M MD+ +DTG + I+ N + ++L+ A ++
Sbjct: 120 APIQWCLYNGDRQTGITTMLMDEGMDTGDMLLKAYTDINLFENAYQIAEKLANQGADLLI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE- 238
E ++KLE N + PQ TYA I+K + V++ +SA +HN IR P
Sbjct: 180 ETLEKLESNEIQAVPQNNEEATYASLINKDDFIVDWNKSAIAIHNQIRGFYPNCFTSFRD 239
Query: 239 -------MMIGNKHERIKLLES---------QLVEGEGKPGEVI----NPNFTIACSQGA 278
+ + L ES L + GKPGEVI N I +G
Sbjct: 240 DKLKIMATIPMDDDHLQSLDESYQELNNQLKSLDKTIGKPGEVIGLIKNFGPVIKTGKGL 299
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ + +QR+G R D + G + +G ++
Sbjct: 300 LLLSEIQRSGKRPQSGWDLVNGTHLKVGELL 330
>gi|318057056|ref|ZP_07975779.1| methionyl-tRNA formyltransferase [Streptomyces sp. SA3_actG]
gi|318078497|ref|ZP_07985829.1| methionyl-tRNA formyltransferase [Streptomyces sp. SA3_actF]
Length = 310
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 91/312 (29%), Positives = 147/312 (47%), Gaps = 7/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E AV L AL++S H +V+V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MRLVFAGTPEVAVPALDALIASERHEVVAVVTRPDAPAG-RGRRLVASPVAQRAEEAGIE 59
Query: 62 A-LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ ++ D VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 60 ILRPARPREESFLDRLREIAPDCCPVVAYGALLPRVALDVPAHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A++AGD TG + +++ LD+GPV + + L L+ + +
Sbjct: 120 PVQHAVLAGDEITGASTFLIEEGLDSGPVYGTVTETVRPTDTSGDLLTRLAFAGSGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E +L PQ G++ A K++ + RV++ A V +R +P PG W
Sbjct: 180 TMDGIEDGSLKPVPQPAEGVSLAPKLTVEDARVDWTAPALRVDRVVRGCTPAPGPWTLFR 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
L ++ PGE+ + + V + +Q G + + D+
Sbjct: 240 GERLKLVSLALAPEV--PHLAPGEIRAGKNSVHVGTGSHPVELGWVQPQGKKPMRAADWA 297
Query: 299 LGCPVIIGCIVG 310
G + G +G
Sbjct: 298 RGVRLAPGETLG 309
>gi|302517946|ref|ZP_07270288.1| methionyl-tRNA formyltransferase [Streptomyces sp. SPB78]
gi|302426841|gb|EFK98656.1| methionyl-tRNA formyltransferase [Streptomyces sp. SPB78]
Length = 357
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 91/312 (29%), Positives = 147/312 (47%), Gaps = 7/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E AV L AL++S H +V+V T+P PAG RG + V S V ++A+E +
Sbjct: 48 MRLVFAGTPEVAVPALDALIASERHEVVAVVTRPDAPAG-RGRRLVASPVAQRAEEAGIE 106
Query: 62 A-LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ ++ D VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 107 ILRPARPREESFLDRLREIAPDCCPVVAYGALLPRVALDVPAHGWVNLHFSLLPAWRGAA 166
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A++AGD TG + +++ LD+GPV + + L L+ + +
Sbjct: 167 PVQHAVLAGDEITGASTFLIEEGLDSGPVYGTVTETVRPTDTSGDLLTRLAFAGSGLLAA 226
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E +L PQ G++ A K++ + RV++ A V +R +P PG W
Sbjct: 227 TMDGIEDGSLKPVPQPAEGVSLAPKLTVEDARVDWTAPALRVDRVVRGCTPAPGPWTLFR 286
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
L ++ PGE+ + + V + +Q G + + D+
Sbjct: 287 GERLKLVSLALAPEV--PHLAPGEIRAGKNSVHVGTGSHPVELGWVQPQGKKPMRAADWA 344
Query: 299 LGCPVIIGCIVG 310
G + G +G
Sbjct: 345 RGVRLAPGETLG 356
>gi|294776916|ref|ZP_06742377.1| methionyl-tRNA formyltransferase [Bacteroides vulgatus PC510]
gi|294449164|gb|EFG17703.1| methionyl-tRNA formyltransferase [Bacteroides vulgatus PC510]
Length = 324
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 99/311 (31%), Positives = 163/311 (52%), Gaps = 11/311 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+V+MGT +FAV +L+ LV +++V V T P +P GR G S V + A L
Sbjct: 6 LRIVYMGTPDFAVESLKRLVEGGYNVVGVITMPDKPMGRHGSVLQPSPVKEYAVSQGLRI 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E + + L +V ++P+ + N +LG +N HASLLP++RGAAPI
Sbjct: 66 LQPEKLKDEAFIEELRSLQADLQIVVAFRMLPEIVWNMPRLGTFNLHASLLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ GD ETGI + +DTG + +VPI+ N + +L L ++E +
Sbjct: 126 NWAVINGDTETGITTFFLKHEIDTGEIIQQVRVPIADTDNVEIVHDKLMYLGGDLVLETV 185
Query: 183 DKLEQNNLPLSPQI-----ENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
D + ++ PQ E + A KI K R+++ + + +++ IR LSP+P AW
Sbjct: 186 DAILNGSVKPVPQESLIRQETELRPAPKIFKETCRIDWNKGVKQIYDFIRGLSPYPAAWT 245
Query: 238 EMMI-GNKHERIKLLESQLVEGEGK--PGEV---INPNFTIACSQGAVRIMRLQRAGGRV 291
E+ + + +K+ E++ V + G++ + F +A G + ++ LQ AG +
Sbjct: 246 ELCVADGTRQVLKIYETEKVFASHEMNIGDIRTDMKTYFQVAVKDGFINVLTLQLAGKKR 305
Query: 292 LDIGDFLLGCP 302
+D+ DFL G
Sbjct: 306 MDVADFLRGYR 316
>gi|30249918|ref|NP_841988.1| Formyl transferase N-terminus:methionyl-tRNA formyltransferase
[Nitrosomonas europaea ATCC 19718]
gi|33516851|sp|Q820J7|FMT_NITEU RecName: Full=Methionyl-tRNA formyltransferase
gi|30180955|emb|CAD85882.1| Formyl transferase N-terminus:Methionyl-tRNA formyltransferase
[Nitrosomonas europaea ATCC 19718]
Length = 324
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 119/312 (38%), Positives = 168/312 (53%), Gaps = 6/312 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT +FA L+ L + IV TQP RPAG RG+K S V AQ++ +P
Sbjct: 1 MRIIFAGTPDFAARALEELQKAGLDIVLTLTQPDRPAG-RGMKMQASPVKILAQQYDIPL 59
Query: 63 LVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P L + + L+ F DV +V AYGL++P+ +L + G N HASLLPRWRGAAP
Sbjct: 60 LQPETLKSSDIQAQLATFKPDVMIVAAYGLLLPEAVLRIPRHGCINIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA++ GD ETGI+IM+M++ LDTG V R +PI TA L +L+ L +VEA
Sbjct: 120 IQRALLEGDTETGISIMQMNQGLDTGAVLLKRSLPIEPYDTTATLHDKLADLGGKCIVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L+Q L PQ E YA KI K E +++ A + IR P PGA+ +
Sbjct: 180 LTLLDQGRLISEPQNEVDACYAAKIRKIEAEIDWTCDAAYIDRMIRTFDPHPGAFTHLQG 239
Query: 242 GNKHERI-KLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+++ + G++I +AC + A+ I LQ+AGG+ L F
Sbjct: 240 NTIKLWQARIVSHVNHNSSHQAGKIITVDPDGIVVACGRDALSIDILQKAGGKKLTAAQF 299
Query: 298 LLGCPVIIGCIV 309
L G P+ G
Sbjct: 300 LAGHPLHPGESF 311
>gi|146297904|ref|YP_001192495.1| methionyl-tRNA formyltransferase [Flavobacterium johnsoniae UW101]
gi|259646033|sp|A5FNN7|FMT_FLAJ1 RecName: Full=Methionyl-tRNA formyltransferase
gi|146152322|gb|ABQ03176.1| methionyl-tRNA formyltransferase [Flavobacterium johnsoniae UW101]
Length = 315
Score = 168 bits (426), Expect = 8e-40, Method: Composition-based stats.
Identities = 96/304 (31%), Positives = 160/304 (52%), Gaps = 6/304 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++FMGT EFAV L ++ +++ +V V T +PAG RG K SAV + A +L
Sbjct: 3 KLRIIFMGTPEFAVGILDTIIKNNYDVVGVITAADKPAG-RGQKIKYSAVKEYALANNLT 61
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L PT L E + L +V ++P+ + LG +N HASLLP +RGAAP
Sbjct: 62 LLQPTNLKDESFLAELKALNANLQIVVAFRMLPKVVWEMPNLGTFNLHASLLPNYRGAAP 121
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ +TG+ +D +DTG + ++ I N L L L + +++
Sbjct: 122 INWAIINGETKTGVTTFFIDDKIDTGAMILNSEIAIEPAENAGQLHDRLMNLGSTTVIDT 181
Query: 182 MDKLEQNNLPLSPQ-IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +E N+ + Q N I A K++K ++++ +S + ++N IR LSP+P AW +
Sbjct: 182 LKVIENGNVITTIQEDNNDIKTAYKLNKENCKIDWTKSGDEINNLIRGLSPYPAAWCFLK 241
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
N+ IK+ E++L+E + G++I IA G ++++ LQ G + + + +
Sbjct: 242 DKNEELSIKIYEAKLLEEAHSYEAGKLISGKKEIKIAIKNGFIQLLSLQLPGKKRMQVAE 301
Query: 297 FLLG 300
L G
Sbjct: 302 LLNG 305
>gi|297621725|ref|YP_003709862.1| Methionyl-tRNA formyltransferase [Waddlia chondrophila WSU 86-1044]
gi|297377026|gb|ADI38856.1| Methionyl-tRNA formyltransferase [Waddlia chondrophila WSU 86-1044]
Length = 307
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 100/303 (33%), Positives = 162/303 (53%), Gaps = 6/303 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT F+ + L+ L+ IVSV T+P +P G R K + + V + A E LP
Sbjct: 1 MKVIFFGTPHFSASVLRYLLEHGIKIVSVVTRPDKPKG-RSNKLISTPVKEVAIEHGLPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K E+ L D+ VVVAYG ++ + IL +LG N H SLLP++RGAAP
Sbjct: 60 YQPEKASSSEFANVLPPYEADLFVVVAYGEIVKEHILGMPRLGCINLHTSLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAIM G+ ETG++IM M K +D G + + + I N L++ L A +++
Sbjct: 120 IQRAIMNGEKETGVSIMYMVKKMDAGDIIQTQSLVIDENETFGELEERLCQKGAEMLLQT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ K E + PQ ++ T+A K+ + +++ A +H+ +R P+PGAW + +
Sbjct: 180 IRKFENGPVEGMPQNDDEATFAPKVELEDCEIDWTMPARRIHDLVRGSQPYPGAWCWVDV 239
Query: 242 GNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +R+KL++S L P ++I I C +G+V+I +LQ G + + +
Sbjct: 240 KGEKKRMKLIKSVLGASVNSVPRKIIAVNEEGVEIGCGEGSVKIQKLQLEGKKAMAPVEL 299
Query: 298 LLG 300
G
Sbjct: 300 FRG 302
>gi|312139582|ref|YP_004006918.1| methionyl-tRNA formyltransferase [Rhodococcus equi 103S]
gi|311888921|emb|CBH48234.1| methionyl-tRNA formyltransferase [Rhodococcus equi 103S]
Length = 307
Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats.
Identities = 104/310 (33%), Positives = 159/310 (51%), Gaps = 10/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E AV +L+ L+ S H +V+V T+P AG RG K V S + + A E +
Sbjct: 1 MRIVFAGTPEPAVPSLRRLIESERHEVVAVVTRPDAVAG-RGRKLVRSPIGQLADEHGIE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P E+ + D VVAYG ++P+ +L+ + G+ N H SLLP WRGAA
Sbjct: 60 VLTPKSASDPEFLARLQELAPDACPVVAYGNLLPRPVLDVPRFGWMNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG + +D+ +DTGPV + I + L LS A +
Sbjct: 120 PVQAAINAGDEMTGATVFALDEGMDTGPVYGVVTEAIRTTDTAGALLARLSESGAILLES 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D +E L PQ G+++A K+S R+ + + A VH H+R+++P PGAW +
Sbjct: 180 VLDGVEDGALQAVPQPREGVSHAPKVSVESARIRWDQPALAVHRHVRSVTPTPGAWTMIG 239
Query: 241 IGNKHERIKLLESQLVEGEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
R+K+ L + PG E+ F + S AVR+ ++Q G + + D+
Sbjct: 240 D----LRVKIGPVTLAQESLPPGRIEIRKDGFYVGTSTTAVRLDQVQPQGKKQMAAVDWA 295
Query: 299 LGCPVIIGCI 308
G + G +
Sbjct: 296 RGARLD-GEV 304
>gi|325672534|ref|ZP_08152230.1| methionyl-tRNA formyltransferase [Rhodococcus equi ATCC 33707]
gi|325556411|gb|EGD26077.1| methionyl-tRNA formyltransferase [Rhodococcus equi ATCC 33707]
Length = 307
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 104/310 (33%), Positives = 159/310 (51%), Gaps = 10/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E AV +L+ L+ S H +V+V T+P AG RG K V S + + A E +
Sbjct: 1 MRIVFAGTPEPAVPSLRRLIESERHEVVAVVTRPDAVAG-RGRKLVRSPIGQLADEHGIE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P E+ + D VVAYG ++P+ +L+ + G+ N H SLLP WRGAA
Sbjct: 60 VLTPKSASDPEFLARLQELAPDACPVVAYGNLLPRPVLDVPRFGWMNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG + +D+ +DTGPV + I + L LS A +
Sbjct: 120 PVQAAINAGDEMTGATVFALDEGMDTGPVYGVVTEAIRTTDTAGALLARLSESGAILLES 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D +E L PQ G+++A K+S R+ + + A VH H+R+++P PGAW +
Sbjct: 180 VLDGVEDGALQAVPQPREGVSHAPKVSVESARIRWDQPALAVHRHVRSVTPTPGAWTMIG 239
Query: 241 IGNKHERIKLLESQLVEGEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
R+K+ L + PG E+ F + S AVR+ ++Q G + + D+
Sbjct: 240 D----LRVKIGPVTLAQDSLPPGRIEIRKDGFYVGTSTTAVRLDQVQPQGKKQMAAVDWA 295
Query: 299 LGCPVIIGCI 308
G + G +
Sbjct: 296 RGARLD-GEV 304
>gi|212691029|ref|ZP_03299157.1| hypothetical protein BACDOR_00519 [Bacteroides dorei DSM 17855]
gi|265752173|ref|ZP_06087966.1| methionyl-tRNA formyltransferase [Bacteroides sp. 3_1_33FAA]
gi|212666261|gb|EEB26833.1| hypothetical protein BACDOR_00519 [Bacteroides dorei DSM 17855]
gi|263236965|gb|EEZ22435.1| methionyl-tRNA formyltransferase [Bacteroides sp. 3_1_33FAA]
Length = 324
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 98/311 (31%), Positives = 162/311 (52%), Gaps = 11/311 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+V+MGT +FAV +L+ LV +++V V T P +P GR G S V + A L
Sbjct: 6 LRIVYMGTPDFAVESLKRLVEGGYNVVGVITMPDKPMGRHGSVLQPSPVKEYAVSQGLRV 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E + + L +V ++P+ + N +LG +N HASLLP++RGAAPI
Sbjct: 66 LQPEKLKDEAFVEELRSLQADLQIVVAFRMLPEIVWNMPRLGTFNLHASLLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ GD ETGI + +DTG + +VPI+ N + +L L ++E +
Sbjct: 126 NWAVINGDTETGITTFFLKHEIDTGEIIQQVRVPIADTDNVEIVHDKLMYLGGDLVLETV 185
Query: 183 DKLEQNNLPLSPQIE-----NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
D + ++ PQ + A KI K R+++ + + +++ IR LSP+P AW
Sbjct: 186 DAILDGSVKPVPQENLIRQETELRPAPKIFKETCRIDWNKGVKQIYDFIRGLSPYPAAWT 245
Query: 238 EMMI-GNKHERIKLLESQL--VEGEGKPGEV---INPNFTIACSQGAVRIMRLQRAGGRV 291
E+ + + +K+ E++ V E G++ + F +A G + ++ LQ AG +
Sbjct: 246 ELCVADGTRQVLKIYETEKVFVSHEMNIGDIRTDMKTYFQVAVKDGFINVLILQLAGKKR 305
Query: 292 LDIGDFLLGCP 302
+++ DFL G
Sbjct: 306 MNVADFLRGYR 316
>gi|150002662|ref|YP_001297406.1| methionyl-tRNA formyltransferase [Bacteroides vulgatus ATCC 8482]
gi|319643280|ref|ZP_07997908.1| methionyl-tRNA formyltransferase [Bacteroides sp. 3_1_40A]
gi|166214874|sp|A6KWC4|FMT_BACV8 RecName: Full=Methionyl-tRNA formyltransferase
gi|149931086|gb|ABR37784.1| methionyl-tRNA formyltransferase [Bacteroides vulgatus ATCC 8482]
gi|317385184|gb|EFV66135.1| methionyl-tRNA formyltransferase [Bacteroides sp. 3_1_40A]
Length = 324
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 98/311 (31%), Positives = 163/311 (52%), Gaps = 11/311 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+V+MGT +FAV +L+ LV +++V V T P +P GR G S V + A L
Sbjct: 6 LRIVYMGTPDFAVESLKRLVEGGYNVVGVITMPDKPMGRHGSVLQPSPVKEYAVSQGLRI 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E + + L +V ++P+ + N +LG +N HASLLP++RGAAPI
Sbjct: 66 LQPEKLKDEAFIEELRSLQADLQIVVAFRMLPEIVWNMPRLGTFNLHASLLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ GD ETGI + +DTG + +VPI+ N + +L L ++E +
Sbjct: 126 NWAVINGDTETGITTFFLKHEIDTGEIIQQVRVPIADTDNVEIVHDKLMYLGGDLVLETV 185
Query: 183 DKLEQNNLPLSPQI-----ENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
D + ++ PQ E + A KI K R+++ + + +++ IR LSP+P AW
Sbjct: 186 DAILNGSVKPVPQESLIRQETELRPAPKIFKETCRIDWNKGVKQIYDFIRGLSPYPAAWT 245
Query: 238 EMMI-GNKHERIKLLESQLVEGEGK--PGEV---INPNFTIACSQGAVRIMRLQRAGGRV 291
E+ + + +K+ E++ V + G++ + F +A G + ++ LQ AG +
Sbjct: 246 ELCVADGTRQVLKIYETEKVFASHEMNIGDIRTDMKTYFQVAVKDGFINVLTLQLAGKKR 305
Query: 292 LDIGDFLLGCP 302
+++ DFL G
Sbjct: 306 MNVADFLRGYR 316
>gi|294661385|ref|YP_003573261.1| hypothetical protein Aasi_1921 [Candidatus Amoebophilus asiaticus
5a2]
gi|227336536|gb|ACP21133.1| hypothetical protein Aasi_1921 [Candidatus Amoebophilus asiaticus
5a2]
Length = 297
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 101/300 (33%), Positives = 153/300 (51%), Gaps = 9/300 (3%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT EFAV +L ALV+ + IV+V T P +P G RG K + + A+++ +P L PT
Sbjct: 1 MGTPEFAVPSLDALVAYGYPIVAVVTAPDKPQG-RGHKILPPPIKVAAEQYGIPVLQPTN 59
Query: 68 LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127
L + + L VV ++P+ + N LG N HASLLP++RGAAPI AIM
Sbjct: 60 LQSPSFLEILDSYEANLYVVVAFRMLPKLVWNKPSLGTINLHASLLPQYRGAAPINWAIM 119
Query: 128 AGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQ 187
G+ TG+ +++ +DTG + K PI L + L A+ ++E + +
Sbjct: 120 QGELTTGLTTFFIEEAIDTGNILLQDKEPIYEMDTAGTLSERLKYKGANLLLETVQAIAS 179
Query: 188 NNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHER 247
NN PQ + A KI + ++N+ +S V N IR LSP+PGAW + +
Sbjct: 180 NNCKAVPQSNVVLHKAPKIYTEDCQINWHQSTAKVFNFIRGLSPYPGAWTILNNIH---- 235
Query: 248 IKLLESQLVE-GEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPV 303
K+L + + PGE + N I GA+ + +LQ AG +++DI FL G +
Sbjct: 236 TKILLAHPLPIPTCSPGEFCSDNKNYLCIGTQDGAISVEQLQPAGKKLMDIQSFLRGHRL 295
>gi|168334697|ref|ZP_02692833.1| methionyl-tRNA formyltransferase [Epulopiscium sp. 'N.t. morphotype
B']
Length = 310
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 7/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV L+ L+ H I V TQP +P G RG K +S V AQ L
Sbjct: 1 MKIVFMGTPDFAVPALEMLIEQGHQISLVITQPDKPRG-RGKKESVSPVKAAAQMHHLAI 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +L + + D+ VVVA+G ++P IL LG N H SLLP++RGAA
Sbjct: 60 AQPERLRKNKEILELLKDIAPDLIVVVAFGQILPATILKIPTLGCVNIHGSLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ G+ TG+ IM MDK LDTG + + +++ I+ + + +L L A A+ E
Sbjct: 120 PIQWALINGETTTGVTIMYMDKGLDTGDMLYKKEISITPDDTAGTMFDKLKNLGALALKE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ +E Q + + A KI K ++NF SA + N IR +SP P A++E
Sbjct: 180 ALPLIENGGAQREKQNNSFSSSAPKIEKEMGKLNFNMSATEIENLIRGMSPSPSAYIEYK 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ E+ G ++ + ++G + I +Q + + + ++
Sbjct: 240 GEK-IKVHAAKEAPEFAATEDAGTILNVDKQGILVKTAKGLLLITEIQVPNKKRMLVSEY 298
Query: 298 LLGCPVIIGCIV 309
+ G + +G +
Sbjct: 299 IKGNQIELGYKL 310
>gi|89098705|ref|ZP_01171587.1| methionyl-tRNA formyltransferase [Bacillus sp. NRRL B-14911]
gi|89086667|gb|EAR65786.1| methionyl-tRNA formyltransferase [Bacillus sp. NRRL B-14911]
Length = 318
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 102/319 (31%), Positives = 164/319 (51%), Gaps = 15/319 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT +F+V L+ L+S +++++ TQP RP G R V +A + +
Sbjct: 1 MT-KIVFMGTPDFSVPILKQLISEGYNVIAAVTQPDRPVG-RKRVLTPPPVKAEAVKQGI 58
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K+ +E E+ L+ D+ V A+G ++P+ +L+ K G N HASLLP RG
Sbjct: 59 PVYQPEKIRVKEELEKILALEPDLIVTAAFGQILPKELLDYPKYGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +I+ G +TGI IM M + LD G + +V I L +LS A +
Sbjct: 119 APIHYSIIQGKEKTGITIMYMAEKLDAGDILTQAEVKIDEQDTAGSLFDKLSAAGAALLS 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + L PQ + T+A I + + +V++ ++ E ++NHIR ++P+P A+ +
Sbjct: 179 ETLPKLLKGELEPIPQNDEEATFAYNIKREQEQVDWTKTGEEIYNHIRGMNPWPVAFTTL 238
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQ-GAVRIMRLQRAGGRVLD 293
+KL S V + + PG V+ F A ++I LQ AG + +
Sbjct: 239 DGS----VVKLWSSAKVGLKEKALPGTVVGIEKDGFIAAAGNMTGIKITELQPAGKKKMS 294
Query: 294 IGDFLLGC--PVIIGCIVG 310
FL G + IG ++G
Sbjct: 295 GEQFLRGAGSSLSIGTVLG 313
>gi|313199963|ref|YP_004038621.1| methionyl-tRNA formyltransferase [Methylovorus sp. MP688]
gi|312439279|gb|ADQ83385.1| methionyl-tRNA formyltransferase [Methylovorus sp. MP688]
Length = 316
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 126/314 (40%), Positives = 174/314 (55%), Gaps = 10/314 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L+++F GT +FAV L ALV+S H +V V TQP RPAG RG+K S V + A +
Sbjct: 1 MPALKIIFAGTPDFAVPALAALVASQHEVVMVLTQPDRPAG-RGMKLKASPVKELALQHQ 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P + Q + ADV +V AYGL+IP +LN LG YN HASLLPRWRG
Sbjct: 60 IPVLQPETLKDADIQAQIAAVKADVMIVAAYGLIIPTSVLNMPALGCYNIHASLLPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQRA++AGD ETG+ IM++ LD G + +PI+ L LS + A M
Sbjct: 120 AAPIQRALLAGDAETGVTIMEVVPALDAGAMVEKGVLPITGRDTAQSLHDGLSAMGAQLM 179
Query: 179 VEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
V+AMD L P PQ E +TYA K+ K E +++ +SAE + +RA +PFP A
Sbjct: 180 VKAMDTLATQRSLPAEPQDEALVTYAAKLQKAEAGIDWTQSAEAISRQVRAFNPFPVAQA 239
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVIN--PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++ ++ + V+G +PG V++ + C QG +RI LQ GG+ L
Sbjct: 240 KLNED----ICRIWMATAVDGNAEPGVVVSVGDAIVVGCGQGLLRIEELQMPGGKRLQAA 295
Query: 296 DFLLGCPVIIGCIV 309
F+ G + G
Sbjct: 296 QFMAGHALKPGDRF 309
>gi|298492310|ref|YP_003722487.1| methionyl-tRNA formyltransferase ['Nostoc azollae' 0708]
gi|298234228|gb|ADI65364.1| methionyl-tRNA formyltransferase ['Nostoc azollae' 0708]
Length = 333
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 94/332 (28%), Positives = 157/332 (47%), Gaps = 25/332 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT +FAV TL+ L++ ++ V TQP + G RG K + S+V A +LP
Sbjct: 1 MKIVFFGTPQFAVPTLEKLLNHTEFEVLGVVTQPDKRRG-RGNKLIPSSVKVLAAAHNLP 59
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
K+ ++ Q ADV +V AYG ++ ++IL KLG N H S+LP++RGA
Sbjct: 60 VWQSEKIKKDTETLTQLQQLAADVFIVAAYGQILSKKILKIPKLGCINVHGSILPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ + G+ ETGI + MD +DTG + PI+ N L + L+ L A ++
Sbjct: 120 APIQWCLYNGEQETGITTILMDVGMDTGDMLLKAITPINLLDNAQILAERLATLGADLLI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + E+ + PQ + TYA I K + +++ +SA +HN IR P
Sbjct: 180 ETLYQFEKQEIQPIPQDNDAATYASLIQKQDYNLDWSKSAIQLHNQIRGFYPNCITTFRD 239
Query: 240 MIGNKHERIKLLESQLVEG-----------------EGKPGEVIN--PNF--TIACSQGA 278
+ + + + + +PGEV++ + +G
Sbjct: 240 QALKITATVPIYSAYIHQLQLELQEKIHNIPDLSTISSQPGEVVSIVKGMGAIVQTGEGL 299
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ + +Q G R DF+ G + + ++G
Sbjct: 300 LLLREVQLTGKRPQSGWDFVNGTRLNVREVMG 331
>gi|224026556|ref|ZP_03644922.1| hypothetical protein BACCOPRO_03313 [Bacteroides coprophilus DSM
18228]
gi|224019792|gb|EEF77790.1| hypothetical protein BACCOPRO_03313 [Bacteroides coprophilus DSM
18228]
Length = 323
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 104/313 (33%), Positives = 162/313 (51%), Gaps = 10/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+V+MGT EFAV +L+ LV +++V V T P +P GR G S V + A L
Sbjct: 6 LRIVYMGTPEFAVESLRRLVEGGYNVVGVITMPDKPMGRHGSVLQPSVVKQYAVSQGLKV 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E + + L +V ++P+ + N +LG +N HASLLP++RGAAPI
Sbjct: 66 LQPEKLKDEAFLEELRALKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A+M GD ETGI + +DTG + KVPI+ N + L L +++ +
Sbjct: 126 NWAVMNGDTETGITTFFLKHEIDTGEIIDQVKVPIADTDNVEIVYDRLMKLGGDLVLKTV 185
Query: 183 DKLEQNNLPLSPQIENGIT----YAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
D + + PQ A KI K R+++ + ++V++ +R LSP+P AW E
Sbjct: 186 DAILDGTVKTIPQECLTQNVELRPAPKIFKETCRIDWRKGVKHVYDFVRGLSPYPAAWTE 245
Query: 239 MMIGN-KHERIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVL 292
+ G +KL E++ + + +PG V++ F IA + G V ++ LQ AG + +
Sbjct: 246 LCAGEAAPVMLKLFETRKLFQTHDLQPGTVVSDGKTFFHIASTDGFVDVLSLQLAGKKRM 305
Query: 293 DIGDFLLGCPVII 305
+ DFL G +
Sbjct: 306 QVEDFLRGYRLAE 318
>gi|182626304|ref|ZP_02954060.1| methionyl-tRNA formyltransferase [Clostridium perfringens D str.
JGS1721]
gi|177908402|gb|EDT70944.1| methionyl-tRNA formyltransferase [Clostridium perfringens D str.
JGS1721]
Length = 317
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 90/318 (28%), Positives = 162/318 (50%), Gaps = 13/318 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +F+V +L+ ++ +++ ++ TQP +P+G RG K +S + + +P
Sbjct: 1 MKIVFMGTPDFSVPSLKKMIE-KYNVSAIVTQPDKPSG-RGKKVSISPIKEVGLSNEIPI 58
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ + D +VVAYG ++ + IL+ +LG HASLLP +RG+A
Sbjct: 59 FQPEKIRTDSVIINKLKELKPDFIIVVAYGQILTKEILDIPRLGCICLHASLLPMYRGSA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI ++ G+ +TG + MD +DTG + +V IS ++ L L V A + E
Sbjct: 119 PINWCLINGEIKTGNTTILMDTGIDTGDMLMRSEVEISESMTAGELYNLLKVNGAELLEE 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA----W 236
++ + + Q + +Y + ++K ++N+ S+ N+HN IR LS +P W
Sbjct: 179 TINGIITGKICGIKQPNDVSSYVKMLNKQMAKINWNDSSINIHNLIRGLSSWPYKNINSW 238
Query: 237 LEMMIGNKHERIKLLESQLVEGE--GKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRV 291
K +K+ +S+ +E PG +I+ +A G + I LQ GG+
Sbjct: 239 PTAYTYYKDIPVKIFKSKSLEANIIDPPGCIIDANNEGIKVATKNGILIIEILQFPGGKP 298
Query: 292 LDIGDFLLGCPVIIGCIV 309
L++ +FL G + G ++
Sbjct: 299 LEVKEFLKGNKIEKGIVL 316
>gi|87121017|ref|ZP_01076909.1| methionyl-tRNA formyltransferase [Marinomonas sp. MED121]
gi|86163855|gb|EAQ65128.1| methionyl-tRNA formyltransferase [Marinomonas sp. MED121]
Length = 325
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 119/307 (38%), Positives = 173/307 (56%), Gaps = 10/307 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS----SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
L++VF GT EFA A+L+AL+ S +H +++VY+QP RPAG RG K V S V + A E
Sbjct: 7 PLKIVFAGTPEFAAASLKALIESSNDENHEVIAVYSQPDRPAG-RGQKLVASPVKQLALE 65
Query: 58 FSLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+P P EE Q L+ D+ VV AYGL++P+ +L+ KLG N HASLLPRW
Sbjct: 66 HEIPVYQPLNFKLEEDRQVLANLDADIMVVAAYGLILPKSVLDIPKLGCINVHASLLPRW 125
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPI R+++ GD ETGI IM+MD LDTG + I +A L L+ L
Sbjct: 126 RGAAPIHRSLIEGDKETGITIMQMDVGLDTGDMLSKVSCDILDEDTSANLHDRLAPLGGA 185
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+V+ ++++++ Q + YA K++K E +++ A ++ IR LSP+PG++
Sbjct: 186 LLVKTLEQIKEGKHQAEKQDDALANYASKLTKQEGLIDWHTPAADLARKIRGLSPWPGSY 245
Query: 237 LEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
LE GN L S L +PG VI +A +G++ + ++Q GG+ L
Sbjct: 246 LETEKGNIKIHQASLHS-LEASSFEPGTVIEINKDTVIVAAKEGSIALHKVQFPGGKQLA 304
Query: 294 IGDFLLG 300
I D L G
Sbjct: 305 IRDALNG 311
>gi|302541078|ref|ZP_07293420.1| methionyl-tRNA formyltransferase [Streptomyces hygroscopicus ATCC
53653]
gi|302458696|gb|EFL21789.1| methionyl-tRNA formyltransferase [Streptomyces himastatinicus ATCC
53653]
Length = 310
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 155/314 (49%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+ L AL++S H +V+V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MRLVFAGTPEVALPALDALIASDRHEVVAVVTRPDAPAG-RGRRLVASPVAERAEEAGIE 59
Query: 62 ALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + + D VVAYG ++P+ L G+ N H SLLP WRGAA
Sbjct: 60 VLKPGKPRDADFLARLAEIAPDCCPVVAYGALLPKAALEIPAHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A++AGD TG + ++++ LD+GPV + + + L L+ A +
Sbjct: 120 PVQHAVLAGDETTGASTFQIEEGLDSGPVYGVVTEDVRPTDTSGDLLTRLAFAGAGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E +L PQ GI+ A KI+ + +++ A V +RA +P PGAW
Sbjct: 180 TMDGIEDGSLRAVPQSAEGISLAPKINVEDAEIDWSAPALRVDRLVRACAPAPGAWTTF- 238
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+K++ + V + PG + AV + ++ G + + D
Sbjct: 239 ---RGERLKVVSAAPVAERTDLAPGVLAATKKAVYAGTGSHAVELTWVRPQGKKPMPAAD 295
Query: 297 FLLGCPVIIGCIVG 310
+ G + G +G
Sbjct: 296 WARGVRIAEGERLG 309
>gi|229548021|ref|ZP_04436746.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ATCC 29200]
gi|257091365|ref|ZP_05585726.1| methionyl-tRNA formyltransferase [Enterococcus faecalis CH188]
gi|257417250|ref|ZP_05594244.1| methionyl-tRNA formyltransferase [Enterococcus faecalis AR01/DG]
gi|312905429|ref|ZP_07764543.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0635]
gi|229306897|gb|EEN72893.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ATCC 29200]
gi|257000177|gb|EEU86697.1| methionyl-tRNA formyltransferase [Enterococcus faecalis CH188]
gi|257159078|gb|EEU89038.1| methionyl-tRNA formyltransferase [Enterococcus faecalis ARO1/DG]
gi|310631158|gb|EFQ14441.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0635]
gi|315161201|gb|EFU05218.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0645]
gi|315577117|gb|EFU89308.1| methionyl-tRNA formyltransferase [Enterococcus faecalis TX0630]
Length = 313
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 102/307 (33%), Positives = 168/307 (54%), Gaps = 13/307 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L++L+ + + + +V TQP RP G R + V + A + +L
Sbjct: 1 MT-KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVG-RKKVITPTPVKEAALKHNL 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ E E+ + D+ V A+G +P++IL A KLG N HASLLP++RG
Sbjct: 59 LVLQPEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ +I+ G+ ETG+ IM+M K +D G + R +PI+ + + ++LS+L ++
Sbjct: 119 APVHYSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + PQ+E T++ I++ + R+++ ++AE + N +R + P+P A+
Sbjct: 179 ETLPKLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWPTAFTTY 238
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N K+ + PG +I IAC +G ++I RLQ AG L
Sbjct: 239 QGTNW----KIWAVTPLTETTTSAPGTIIQRSKKVLWIACGEGTVLQIDRLQPAGKGQLT 294
Query: 294 IGDFLLG 300
I +FL G
Sbjct: 295 IQEFLNG 301
>gi|269127210|ref|YP_003300580.1| methionyl-tRNA formyltransferase [Thermomonospora curvata DSM
43183]
gi|268312168|gb|ACY98542.1| methionyl-tRNA formyltransferase [Thermomonospora curvata DSM
43183]
Length = 308
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 102/312 (32%), Positives = 164/312 (52%), Gaps = 10/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT E A+ L+AL+ S H + +V T+P PAG RG + S V ++A++ +
Sbjct: 1 MRLVFAGTPETALPALEALLESRHEVAAVVTRPDAPAG-RGRRLTASPVAQRAEKAGIEV 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K ++ ++ D VVAYG ++P+ L+ + G+ N H SLLP WRGAAP
Sbjct: 60 LKPAKAKDPDFLDRLRRIAPDCCPVVAYGALLPRVALDIPRHGWVNLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q AI+ GD+ TG ++++ LDTGPV M PI L + L+ A +V+
Sbjct: 120 VQHAILHGDDITGACTFQIEEDLDTGPVYGMLTEPIRPTDTAGDLLERLARAGARLLVDT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
MD +EQ L PQ G++YA K++ + R+++ A V +RA +P PGAW
Sbjct: 180 MDGIEQGALQPRPQPAEGVSYAPKLTPEDARIDWKAPAMRVDRLVRACTPAPGAWTTF-- 237
Query: 242 GNKHERIKLLESQLVEGEGK--PGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ ER+K+ +L G G+ PG++ + + V + +Q G R + D+
Sbjct: 238 --RGERLKVGPVRLAAGGGELAPGKLKAGKREVLVGTATHPVALGEVQPQGKRRMPAADW 295
Query: 298 LLGCPVIIGCIV 309
G + ++
Sbjct: 296 ARGLSLTDEDVL 307
>gi|217967821|ref|YP_002353327.1| methionyl-tRNA formyltransferase [Dictyoglomus turgidum DSM 6724]
gi|226704294|sp|B8E0X6|FMT_DICTD RecName: Full=Methionyl-tRNA formyltransferase
gi|217336920|gb|ACK42713.1| methionyl-tRNA formyltransferase [Dictyoglomus turgidum DSM 6724]
Length = 314
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 108/314 (34%), Positives = 167/314 (53%), Gaps = 10/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+++ GT EF+ L+ + S + +I++V TQP +P G RG + + S V A +P
Sbjct: 1 MRIIYFGTPEFSRIILERI--SPYLNIIAVVTQPDKPKG-RGKRIMCSPVKDFAISKGIP 57
Query: 62 ALVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K +E +E S N + VV +YG +IP+ ILN G N HAS+LP++RGA
Sbjct: 58 VYQPEKLKGNKEFFEIIRSLNPEALVVASYGKIIPEDILNIPPYGGINVHASVLPKYRGA 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API+RAIM + ETG++IMKM++ LDTGPV +RK+PI + N L +L+ L A ++
Sbjct: 118 APIERAIMNCEKETGVSIMKMERGLDTGPVYAIRKIPILPDDNRGTLSIKLAHLGAELLL 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + ++ L PQ E+ TYA K+SK E +++ E + IRALSP PGA
Sbjct: 178 EVLPLIKDGKLSPVPQEESLATYAPKLSKEEEIIDWNMRGEKIWCQIRALSPEPGAMTFF 237
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
E ++ E G +I + + G + ++ LQ G + +
Sbjct: 238 RGKILKIFKADFEEKIFNEEIINGTIIEQNKKRGIGVKVNNGILWLLELQPEGKKRMSFL 297
Query: 296 DFLLGCPVIIGCIV 309
+F+ G + IG
Sbjct: 298 EFMNGYRLNIGERF 311
>gi|254411419|ref|ZP_05025196.1| methionyl-tRNA formyltransferase [Microcoleus chthonoplastes PCC
7420]
gi|196181920|gb|EDX76907.1| methionyl-tRNA formyltransferase [Microcoleus chthonoplastes PCC
7420]
Length = 335
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 25/331 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ V+F GT +FAV TL+ L++ S +++ V TQP + G RG K S + A L
Sbjct: 1 MNVIFFGTPQFAVPTLERLINHSEFNVLGVVTQPDKRRG-RGNKLSPSPIKTLALTHQLH 59
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ + Q ADV VVVAYG ++ Q IL+ +LG N H SLLP++RGA
Sbjct: 60 VWQPKRVKKHTETLSQLKQAEADVFVVVAYGQILSQEILDMPRLGCVNVHGSLLPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ + G+ ETGI M MD +DTGP+ PI + L LS L A ++
Sbjct: 120 APIQWCLYQGETETGITTMLMDAGMDTGPMLLKAHTPIGLLDDAHQLAVRLSDLGADLLI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL Q ++ Q + TYA I K + V++ +SA +HN IR P A
Sbjct: 180 ETLLKLNQGDVQPIAQDNSQATYAPLIQKSDYAVDWSQSAIEIHNQIRGFIPNCVASFRD 239
Query: 240 MIGNKHERIKLLES-----------------QLVEGEGKPGEVINP----NFTIACSQGA 278
L E+ + E G PGEV++ I +G
Sbjct: 240 QSLKILATAPLGEAYFPQLPTDFKISEQQWLSVKEASGHPGEVVSIIKGMGPIIQTGEGL 299
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ + ++ AG R DF G V G I+
Sbjct: 300 LLLREVKLAGKRAQSAWDFANGMRVAGGEIL 330
>gi|304440680|ref|ZP_07400564.1| methionyl-tRNA formyltransferase [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304370867|gb|EFM24489.1| methionyl-tRNA formyltransferase [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 306
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 107/311 (34%), Positives = 165/311 (53%), Gaps = 9/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+++MGT EFAV + L + +V T + +G RG K + V K A E ++
Sbjct: 1 MRIIYMGTPEFAVKPFEKLADN-FEVVLAVTNEDKSSG-RGKKITMPPVKKAALERNIEV 58
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + ++ SFNAD+ VV AYG ++ ILN T N HAS+LP+ RGAAP
Sbjct: 59 FQPKNVNSSDSIEYLKSFNADLVVVCAYGKILRDGILNLTGDNPVNIHASILPKLRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD E G++IMK+++ LDTG + + K I ++ELS + A +VE
Sbjct: 119 INFAIINGDKEAGVSIMKVEEGLDTGDYSLVGKTEIGKKNVEEL-EEELSEMGADLIVEF 177
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+++ + NL + Q + TYA KISK ++F +N + +
Sbjct: 178 VNRYSKGNLNWTKQNDEESTYAPKISKDFGYLDFTSMDKNYIERLSRGLTKKNGISILYD 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
GN RIKL E ++ EG+G+PGEV+ + IA G+++ RLQ G +++D DF
Sbjct: 238 GN---RIKLDEIEVSEGKGEPGEVLESSKYLEIATKDGSIKAHRLQWPGKKMMDAEDFFR 294
Query: 300 GCPVIIGCIVG 310
G + G I+G
Sbjct: 295 GRKIEKGSIIG 305
>gi|126663450|ref|ZP_01734447.1| methionyl-tRNA formyltransferase [Flavobacteria bacterium BAL38]
gi|126624398|gb|EAZ95089.1| methionyl-tRNA formyltransferase [Flavobacteria bacterium BAL38]
Length = 315
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 95/312 (30%), Positives = 151/312 (48%), Gaps = 6/312 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VFMGT +FAV L + +++ IV V T P +PAG RG K SAV + A E +L
Sbjct: 3 KLRIVFMGTPDFAVGILNTIYQNNYDIVGVITAPDKPAG-RGQKVSTSAVKEYALEKNLR 61
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L PT L E++ L VV ++P+ + KLG +N HASLLP +RGAAP
Sbjct: 62 LLQPTNLKSEDFLAELKSLDANLQVVVAFRMLPEVVWRMPKLGTFNLHASLLPEYRGAAP 121
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ +TG+ +D +DTG + ++ I +N L L + + ++E
Sbjct: 122 INWAIINGETKTGVTSFFIDDKIDTGAIILSKETAIGTNETAGELHDRLMHVGSETVLET 181
Query: 182 MDKLEQNNLPLSPQ-IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +E + Q + A K++K ++++ +S + N IR LSP+P AW +
Sbjct: 182 LQLIESEKASTTLQENNLEVKTAYKLNKENCKIDWSQSGRTIFNLIRGLSPYPAAWTYIK 241
Query: 241 IGNKHERIKLLES--QLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
G +K+ + + E G++ I G ++I LQ G + + +
Sbjct: 242 DGENEWNVKIYIASFEKSEHSDTIGKITTTKKEIFINTKDGVLKIESLQFPGKKRMLAHE 301
Query: 297 FLLGCPVIIGCI 308
L G I
Sbjct: 302 LLNGISFSENAI 313
>gi|330827127|ref|YP_004390430.1| methionyl-tRNA formyltransferase [Alicycliphilus denitrificans
K601]
gi|329312499|gb|AEB86914.1| Methionyl-tRNA formyltransferase [Alicycliphilus denitrificans
K601]
Length = 323
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 115/321 (35%), Positives = 171/321 (53%), Gaps = 14/321 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT EFA L+ L+++ ++ V TQP RPAG RG+K S V + A E
Sbjct: 1 MKVIFAGTPEFARVALEHLLAAGLTVPLVLTQPDRPAG-RGMKLQASPVKQCALEHGTAV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ AD VV AYGL++PQ +L+ +LG N HASLL
Sbjct: 60 AQPRSLRLDGKYPDDAAAARAAIEAAQADAMVVAAYGLILPQWVLDMPRLGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RAI AGD ETG+ IM+MD LDTG + + K I+ TA L L+ +
Sbjct: 120 PRWRGAAPIHRAIEAGDTETGVTIMQMDAGLDTGDMLLVEKTAIAPMDTTATLHDRLAQI 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+V+A++ + L +PQ G++YA KI K E+++++ AE + +RA +PFP
Sbjct: 180 GGRLIVQALELAGRGGLEATPQPAEGVSYAHKIEKAESQIDWSLPAEAIARRVRAFAPFP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGG 289
GA + ++S + G+++ + +AC G+ +R+ LQRAGG
Sbjct: 240 GAATRLGADAIKVWSCEIDSCKHFPDKPCGQILHIDDAGIAVACGAGSVLRLTVLQRAGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIVG 310
+ L DFL G + G ++G
Sbjct: 300 KRLPAADFLRGFALAPGMVLG 320
>gi|325957115|ref|YP_004292527.1| methionyl-tRNA formyltransferase [Lactobacillus acidophilus 30SC]
gi|325333680|gb|ADZ07588.1| methionyl-tRNA formyltransferase [Lactobacillus acidophilus 30SC]
gi|327183839|gb|AEA32286.1| methionyl-tRNA formyltransferase [Lactobacillus amylovorus GRL
1118]
Length = 314
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 95/311 (30%), Positives = 171/311 (54%), Gaps = 13/311 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+FMGT EF+V L+ L+ +++ I +V TQP + G R K S A++ +LP
Sbjct: 4 VIFMGTPEFSVPVLEGLIENNYEIKAVVTQPDKKVG-RKQKITKSPAKVAAEKHNLPIYQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G +E ++ + +AD+ V AYG +P + LN+ K+ N H SLLP++RG APIQ
Sbjct: 63 PAKLSGSDEMQELIDMHADLIVTAAYGQFLPTKFLNSVKIAAVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETGI IM+M K +D G + + I + N L +L+++ +++ +
Sbjct: 123 YSLINGDAETGITIMEMVKKMDAGDIYAQEAIKIQPDDNAGTLFAKLAIVGRDLLLKTLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ + +PQ + + ++ I+K + R+ +A +N IRAL+P PGA++ +
Sbjct: 183 SIIDGTVKKTPQDPDKVVFSPNITKEQERITTSMTATEANNMIRALNPDPGAYMMVEG-- 240
Query: 244 KHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFL 298
+R K+ ++++ + + KPG V+ F I+ + G + ++ +Q +G + ++I +FL
Sbjct: 241 --KRFKVWKAEVADETTDLKPGSVVANKGRFAISFADGNVLNLLEVQPSGKKRMNIKNFL 298
Query: 299 L--GCPVIIGC 307
G G
Sbjct: 299 NGQGSKFTPGE 309
>gi|224535869|ref|ZP_03676408.1| hypothetical protein BACCELL_00733 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522592|gb|EEF91697.1| hypothetical protein BACCELL_00733 [Bacteroides cellulosilyticus
DSM 14838]
Length = 323
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 101/318 (31%), Positives = 166/318 (52%), Gaps = 14/318 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV +L+ LV +++V V T P +PAG RG K S V + A E
Sbjct: 2 MKKEDLRIVYMGTPDFAVESLRCLVEGGYNVVGVITMPDKPAG-RGHKLQFSPVKQYALE 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
SLP L P KL E + + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 61 HSLPLLQPEKLKDEAFVEALREWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V ++PI+ + + +L +L
Sbjct: 121 GAAPINWAVINGDTETGITTFFLRHEIDTGEVIQQVRIPIADTDDVGIVHDKLMMLGGKL 180
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ E +D + + + PQ E + A KI K R+++ + + +++ IR LSP+P
Sbjct: 181 VTETVDAILNDAVKPIPQEEMAVVGELRPAPKIFKDTCRIDWNQPVKRIYDFIRGLSPYP 240
Query: 234 GAWLEMMIGN-KHERIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQRA 287
AW E++ + + +K+ E++ + + PG ++ +A + G + I LQ
Sbjct: 241 AAWSELVQPDGETVVMKIFETEKIIQSHQLTPGTLLTDGKTYIHVAAADGIIGIRALQLP 300
Query: 288 GGRVLDIGDFLLGCPVII 305
G + L + L G +
Sbjct: 301 GKKRLKTDELLRGFRLTE 318
>gi|27467809|ref|NP_764446.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis ATCC
12228]
gi|251810646|ref|ZP_04825119.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|293366819|ref|ZP_06613495.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|33516863|sp|Q8CSW1|FMT_STAES RecName: Full=Methionyl-tRNA formyltransferase
gi|27315353|gb|AAO04488.1|AE016746_278 methionyl-tRNA formyltransferase [Staphylococcus epidermidis ATCC
12228]
gi|251805806|gb|EES58463.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|291319120|gb|EFE59490.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329730001|gb|EGG66392.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis
VCU144]
Length = 310
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 109/316 (34%), Positives = 172/316 (54%), Gaps = 14/316 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ +++FMGT +F+ L+ L+ + H +++V TQP RP G R V + A + +
Sbjct: 1 MS-KIIFMGTPDFSTKILEMLI-AEHEVIAVVTQPDRPVG-RKKVMTPPPVKRVATKHQI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K +E E LS +D+ V A+G ++P+ +LNA KLG N HASLLP++RG
Sbjct: 58 PVYQPEKLKDSQELESLLSLESDLIVTAAFGQLLPESLLNAPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N + +LS L A +
Sbjct: 118 APIHQAIIDGEEETGITIMYMVKKLDAGNIISQQSIRIEEEDNVGTMHDKLSFLGAELLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + N PQ + T+A I + + RV++ SA+ +HNHIR LSP+P A+ M
Sbjct: 178 KTLPSIIDNTNDSIPQDDALATFASNIRREDERVDWNMSAQAIHNHIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE-GKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLDI 294
N +KL + +V+G+ G PG +I IA A+ + +Q AG + + +
Sbjct: 238 NEKN----LKLFSAFIVKGKKGNPGTIIETTKHELIIATGSDDAIALTEIQPAGKKRMKV 293
Query: 295 GDFLLGCPVI-IGCIV 309
D+L G +G ++
Sbjct: 294 TDYLSGVQESLVGKVL 309
>gi|332292783|ref|YP_004431392.1| methionyl-tRNA formyltransferase [Krokinobacter diaphorus 4H-3-7-5]
gi|332170869|gb|AEE20124.1| methionyl-tRNA formyltransferase [Krokinobacter diaphorus 4H-3-7-5]
Length = 316
Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 97/309 (31%), Positives = 157/309 (50%), Gaps = 7/309 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT EFAV L L+ +++V V T P RPAG RG K S V A+ +L
Sbjct: 4 LRIVFMGTPEFAVTILNGLLEEEYNVVGVITAPDRPAG-RGQKVRESDVKAFAKARNLNI 62
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L PT L EE+ + L +V ++P+ + G +N HASLLP++RGAAPI
Sbjct: 63 LQPTNLKSEEFLKELKDLNANLQIVVAFRMLPEAVWKMPAYGTFNLHASLLPQYRGAAPI 122
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ ETG+ +D+ +DTG + K+ I N L L + +V+ +
Sbjct: 123 NWAIINGETETGVTTFFIDEKIDTGEIILQEKLAIDDKENAGVLHDRLMIAGKELVVKTV 182
Query: 183 DKLEQNNLPLSPQIENGI-TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + Q + A K+ TR+++ ++++NHIR LSP+P A+ +
Sbjct: 183 KAIAIDEVSTFVQDSSRELKTAYKLHSENTRIDWDAPLQDIYNHIRGLSPYPAAYTMLEN 242
Query: 242 GNKHERIKLLE--SQLVEGEGKP-GEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
G K +R+K+ ++ + P G V ++ + IA +G + I +Q +G + + + D
Sbjct: 243 GGKEQRVKIYSAFAKAEKEMFIPSGAVTQVDDHLAIATPEGYICITEIQLSGKKKMAVKD 302
Query: 297 FLLGCPVII 305
L G
Sbjct: 303 LLNGYKFDK 311
>gi|124007788|ref|ZP_01692490.1| methionyl-tRNA formyltransferase [Microscilla marina ATCC 23134]
gi|123986734|gb|EAY26515.1| methionyl-tRNA formyltransferase [Microscilla marina ATCC 23134]
Length = 308
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 94/308 (30%), Positives = 158/308 (51%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F+GT +FAV +L+ LV + ++V+V T + AG RG K SAV A E ++P
Sbjct: 1 MRIIFLGTPDFAVPSLKVLVDNGFNVVAVVTATDKRAG-RGNKIKTSAVKDFALEHNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P +L E+ + L+ +V ++P+ + N LG +N HASLLP +RGAAPI
Sbjct: 60 LQPERLKAPEFIEELASYQADLQIVVAFRMLPEAVWNMPSLGTFNLHASLLPDYRGAAPI 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ ETG+ + + +DTG + F K PI N + ++L + +++ +
Sbjct: 120 NWAIINGEKETGVTTFFLKQKIDTGNIIFQEKAPILPEDNIGTMYEKLKNIGGGLVLKTV 179
Query: 183 DKLEQNNLPLSPQIENGITYA-EKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ P + Q + T KI + +++ +++E VHN +R L+P P AW +
Sbjct: 180 RAIQAGKYPQTAQDLSKETPPAPKIFRETCEIDWNKTSEQVHNLVRGLAPIPAAWTMLSG 239
Query: 242 GNK-HERIKLLESQLVEG--EGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIG 295
N + L QL EG +PGE + N G + + L+ G + +D+
Sbjct: 240 KNCKIYKTSLATPQLPEGVEAKQPGEYVTDNKKYLYFKTGDGFIAVEDLKLEGKKRMDVK 299
Query: 296 DFLLGCPV 303
FL G +
Sbjct: 300 SFLSGNKL 307
>gi|170078261|ref|YP_001734899.1| methionyl-tRNA formyltransferase [Synechococcus sp. PCC 7002]
gi|238692811|sp|B1XP50|FMT_SYNP2 RecName: Full=Methionyl-tRNA formyltransferase
gi|169885930|gb|ACA99643.1| methionyl-tRNA formyltransferase [Synechococcus sp. PCC 7002]
Length = 328
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 95/328 (28%), Positives = 158/328 (48%), Gaps = 21/328 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+VVF GT +FAV L+AL++ ++ V TQP + G RG + + SAV K A LP
Sbjct: 2 LKVVFFGTPQFAVPYLEALLNHPDIEVLGVVTQPDKRRG-RGSQLIPSAVKKVAIAHDLP 60
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ ++ + ADV VVAYG ++ +IL +LG NGH SLLP++RGA
Sbjct: 61 VWQPKRIKKDPETLAILENLQADVFAVVAYGQLLSPQILQMPRLGCVNGHGSLLPKYRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ +++ G+ TG+ M MD+ +DTG + + PI N L +L+ A +
Sbjct: 121 APIQWSLVQGETVTGMTTMLMDEGMDTGAMLLKAETPIDLWDNAHDLAVKLATSGAALLT 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL-- 237
E + +L Q + PQ + TYA I K + ++++ + A +HN +R P
Sbjct: 181 ETLIQLAQGKITPIPQDPDQATYAPLIQKEDFQLDWQKGAIALHNQVRGFYPNCLTTCRD 240
Query: 238 -------EMMIGNKHERIKLLESQLVE----GEGKPGEVI----NPNFTIACSQGAVRIM 282
+ + + + ++ GK GE++ I G + +
Sbjct: 241 KPLKVLETIPLVPECFAQYPAAYEPLKEFVGNTGKVGEIVAIAKKFGPIIQTGDGLLLLK 300
Query: 283 RLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
++Q +G + D + G + +G +G
Sbjct: 301 QVQPSGKKPQSGWDMVNGMRLTVGESLG 328
>gi|149375619|ref|ZP_01893388.1| methionyl-tRNA formyltransferase [Marinobacter algicola DG893]
gi|149360021|gb|EDM48476.1| methionyl-tRNA formyltransferase [Marinobacter algicola DG893]
Length = 311
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 125/315 (39%), Positives = 179/315 (56%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L++L+++ H +V VY+QP RPAG RG K S V + A E +P
Sbjct: 1 MRLVFAGTPEFAATALKSLLTTHHHVVGVYSQPDRPAG-RGRKLTPSPVKQVAVEAGIPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E + S NADV +V AYGL++PQ +L+ + G N HASLLPRWRGAAP
Sbjct: 60 FQPESLKSPEAQDELRSLNADVMIVAAYGLILPQVVLDLPRHGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETGI IM+MD LDTG + PI L L+ L A+V+A
Sbjct: 120 IQRAIAAGDRETGITIMQMDAGLDTGAMLLKAITPIEEADTGGSLHDRLAGLGGEAIVKA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+++LE+ L Q E YA K+SK E +++ R A + IRA +P+PG + ++
Sbjct: 180 LEQLEKGELQGEIQDEARACYARKLSKEEGHIDWTRDAPAISRLIRAFNPWPGTYTDLED 239
Query: 242 GNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
RI++ ++++++ + PG VI IAC ++RI RLQ +G R + D
Sbjct: 240 ----LRIRIHQAEILDDTSDKHPGTVIRRDRTGIDIACGLESLRITRLQLSGSRPQSVND 295
Query: 297 FLLGCP--VIIGCIV 309
+ G ++ G +
Sbjct: 296 LINGGKDILMPGQEL 310
>gi|149372185|ref|ZP_01891455.1| methionyl-tRNA formyltransferase [unidentified eubacterium SCB49]
gi|149354952|gb|EDM43514.1| methionyl-tRNA formyltransferase [unidentified eubacterium SCB49]
Length = 316
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 98/308 (31%), Positives = 157/308 (50%), Gaps = 6/308 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VF+GT +FAV L++L+ + H+IV V T P RPAG RG K SAV + A LP
Sbjct: 5 LRIVFLGTPDFAVGILKSLIEAKHTIVGVITAPDRPAG-RGRKLKHSAVKEYALSQGLPV 63
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L PT L E++ L ++ ++P+ + + + G +N HASLLP++RGAAPI
Sbjct: 64 LQPTNLKNEDFLASLKALQANLQIIVAFRMLPKVVWSMPEHGTFNLHASLLPQYRGAAPI 123
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ ETG+ +D+ +DTG + V I N L L L + +++ +
Sbjct: 124 NWAIINGEKETGVTTFFIDEKIDTGAILLKSSVAIKENETVGSLHDTLMDLGSELVLKTV 183
Query: 183 DKLEQNNLPLSPQIENGI-TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
D + Q N+ PQ G+ A K++ ++++ + E + IR LSP+P AW ++
Sbjct: 184 DTIAQGNVETFPQPLEGVLKDAPKLTPENMKIDWSQPGEKIVALIRGLSPYPVAWCQLTQ 243
Query: 242 GNKHERIKLLESQLVEGEGK--PGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ ++K+ ++ K G + +A G V I +Q G R +DI
Sbjct: 244 DDQTNKVKIYAAEFEADSHKQNIGHIFTTKKTMKVAVINGYVLIKEMQLPGKRKMDIVSL 303
Query: 298 LLGCPVII 305
L G
Sbjct: 304 LNGNDFSE 311
>gi|320161484|ref|YP_004174708.1| methionyl-tRNA formyltransferase [Anaerolinea thermophila UNI-1]
gi|319995337|dbj|BAJ64108.1| methionyl-tRNA formyltransferase [Anaerolinea thermophila UNI-1]
Length = 305
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 113/306 (36%), Positives = 165/306 (53%), Gaps = 10/306 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M +VVFMG+ EFA+ TL+AL + +V V TQP RPAG RG V AQ+ +
Sbjct: 1 MLPKVVFMGSPEFALPTLKALAE-HYPVVGVVTQPDRPAG-RGNMLTPPPVKVLAQQLGI 58
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K E E+ +++ D+ VV A+G ++ Q +L+ + G N HASLLPRWRGA
Sbjct: 59 EVFQPEKLRNPEAMEKLRTWSPDLIVVAAFGQILRQAVLDLPQFGCINVHASLLPRWRGA 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PIQ AI+ GD TG+ IMKMD +DTGP+ R+V I + L L+ A+ ++
Sbjct: 119 SPIQAAILHGDIVTGVTIMKMDAGIDTGPILAQREVAIQPDDTAGSLSDRLAEEGANLLI 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + L PQ E G TYA+ ++K E +NF S + N +RA P+P A+
Sbjct: 179 EVLPEYLTGRLHPKPQPEEGATYAKMLTKEEGHLNFEESVHQLVNRVRAYHPWPSAYTF- 237
Query: 240 MIGNKHERIKLLESQLV-EGEGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +Q V + + G+ VI I S G + ++ +Q AG R +D D
Sbjct: 238 ---WNGQMLKIHRAQAVQDSQATLGKRKVIEGYPAIGASDGWLVLLEVQPAGKRAMDGKD 294
Query: 297 FLLGCP 302
FL G
Sbjct: 295 FLRGAR 300
>gi|119896392|ref|YP_931605.1| methionyl-tRNA formyltransferase [Azoarcus sp. BH72]
gi|119668805|emb|CAL92718.1| Fmt protein [Azoarcus sp. BH72]
Length = 321
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 127/315 (40%), Positives = 172/315 (54%), Gaps = 12/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LRV F GT EFA + L A++ + +S+ V TQP RPAG RG+K S V + A L
Sbjct: 4 PLRVAFAGTPEFAASALAAILDAGYSVPLVLTQPDRPAG-RGMKLTPSPVKQLALARGLD 62
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL +E Q + DV VV AYGL++P +L + G N HASLLPRWRGAA
Sbjct: 63 VDQPEKLRTDEQRQRLAACEPDVLVVAAYGLILPAAVLQLPRYGCINIHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI RA+ AGD ETGI IM+MD+ LDTG + R +PI + T L +L+ L A +VE
Sbjct: 123 PIHRAVEAGDAETGITIMQMDEGLDTGDMLLRRAIPIRPDDTTGTLHDKLAALGAECIVE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ L L +PQ G+TYA KI + E +++ R A ++ +RA +PFP A +
Sbjct: 183 ALAALPGGTLSRTPQPAAGVTYANKIHRDEAAIDWTRPAADIERAVRAFNPFPVAVGSLR 242
Query: 241 IGNKHERIKLLESQLV---EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
IK+ +++V + PG V+ +AC A+R+ LQR G R
Sbjct: 243 DT----VIKVWAAEVVAVPAPDAAPGTVLAADAEGVVVACGAQALRLRELQRPGSRRFAA 298
Query: 295 GDFLLGCPVIIGCIV 309
G+FL G PV G
Sbjct: 299 GEFLRGFPVCAGERF 313
>gi|256823832|ref|YP_003147795.1| methionyl-tRNA formyltransferase [Kangiella koreensis DSM 16069]
gi|256797371|gb|ACV28027.1| methionyl-tRNA formyltransferase [Kangiella koreensis DSM 16069]
Length = 319
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 122/302 (40%), Positives = 176/302 (58%), Gaps = 7/302 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+L+V+F GT +FA +L A++ S H +V+VYTQP R AG RG K +S V + A E +P
Sbjct: 4 SLKVIFAGTPDFATGSLAAVLKSHHQVVAVYTQPDRKAG-RGKKISMSPVKELALEHDIP 62
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P EE Q S+ ADV VVVAYGL++PQ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VEQPINFKSEESLAQLASYEADVMVVVAYGLLLPQSVLDTPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+M+ LDTGP+ +PI+ + L +L+ A +VE
Sbjct: 123 PIQRSIQAGDTETGVTIMQMEAGLDTGPMLLTASLPITEQDTGSSLHDKLAEQGAQLLVE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+DKL N L +PQ ++ TYA K+SK E ++++ SA+ + IRA + +P A+ +
Sbjct: 183 ALDKLSNNQLSPTPQDDSLATYAHKLSKAEAQLDWQLSAQELERTIRAFNSWPVAYS--L 240
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
I RI + + +PG ++ + +AC Q + + LQ G R + D
Sbjct: 241 IDEATVRIWQANVCQSQTKSEPGVILQADSNGILVACGQDGLLLTELQLPGSRAMSAKDL 300
Query: 298 LL 299
L
Sbjct: 301 LN 302
>gi|120435798|ref|YP_861484.1| methionyl-tRNA formyltransferase [Gramella forsetii KT0803]
gi|117577948|emb|CAL66417.1| methionyl-tRNA formyltransferase [Gramella forsetii KT0803]
Length = 315
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 96/308 (31%), Positives = 159/308 (51%), Gaps = 6/308 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT EFAV +L+A++ + +++V V T P +PAG RG K SAV A L
Sbjct: 4 LRIVFMGTPEFAVNSLEAILDAGYNVVGVITAPDKPAG-RGRKLRESAVKSYALSKDLKV 62
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P L EE++ L VV ++P+ + + + G +N HASLLP++RGAAPI
Sbjct: 63 LQPANLKSEEFQSELIELKPNVQVVVAFRMLPKSVWDLPEYGTFNLHASLLPQYRGAAPI 122
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ +TG++ +D+ +DTG + F ++ I N L L + A +V +
Sbjct: 123 NWAIINGEEKTGVSTFFLDEKIDTGAMIFQEEISIDETENLESLHDRLMNMGAKLIVRTL 182
Query: 183 DKLEQNNLPLSPQ-IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ N + Q + A K+SK T++++ E ++N IR L+P+P AW +
Sbjct: 183 KTIASNTVTTEAQEDSETLRDAPKLSKENTKIDWNAPVEKIYNLIRGLNPYPAAWCYLAN 242
Query: 242 GNKHERIKLLESQLVEGEG--KPGEV-INPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ ++K+ + + V+ E G + I+ N +A G + + +Q G R +
Sbjct: 243 SSEELKVKIYDIEKVKQEHRLPNGTITISDNMIKVAAINGYILVNEIQLPGKRKMLSKAL 302
Query: 298 LLGCPVII 305
L G
Sbjct: 303 LNGFNFAP 310
>gi|315038634|ref|YP_004032202.1| methionyl-tRNA formyltransferase [Lactobacillus amylovorus GRL
1112]
gi|312276767|gb|ADQ59407.1| methionyl-tRNA formyltransferase [Lactobacillus amylovorus GRL
1112]
Length = 314
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 95/311 (30%), Positives = 171/311 (54%), Gaps = 13/311 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+FMGT EF+V L+ L+ +++ I +V TQP + G R K S A++ +LP
Sbjct: 4 VIFMGTPEFSVPALEGLIENNYEIKAVVTQPDKKVG-RKQKITKSPAKVAAEKHNLPIYQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G +E ++ + +AD+ V AYG +P + LN+ K+ N H SLLP++RG APIQ
Sbjct: 63 PAKLSGSDEMQELIDMHADLIVTAAYGQFLPTKFLNSVKIAAVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETGI IM+M K +D G + + I + N L +L+++ +++ +
Sbjct: 123 YSLINGDAETGITIMEMVKKMDAGDIYAQEAIKIQPDDNAGTLFAKLAIVGRDLLLKTLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ + +PQ + + ++ I+K + R+ +A +N IRAL+P PGA++ +
Sbjct: 183 SIIDGTVKKTPQDPDKVVFSPNITKEQERITTSMTATEANNMIRALNPDPGAYMMVEG-- 240
Query: 244 KHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFL 298
+R K+ ++++ + + KPG V+ F I+ + G + ++ +Q +G + ++I +FL
Sbjct: 241 --KRFKVWKAEVADETTDLKPGSVVANKGRFAISFADGNVLNLLEVQPSGKKRMNIKNFL 298
Query: 299 L--GCPVIIGC 307
G G
Sbjct: 299 NGQGSKFTPGE 309
>gi|253997898|ref|YP_003049961.1| methionyl-tRNA formyltransferase [Methylovorus sp. SIP3-4]
gi|253984577|gb|ACT49434.1| methionyl-tRNA formyltransferase [Methylovorus sp. SIP3-4]
Length = 316
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 125/314 (39%), Positives = 174/314 (55%), Gaps = 10/314 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L+++F GT +FAV L ALV+S H +V V TQP RPAG RG+K S V + A +
Sbjct: 1 MPALKIIFAGTPDFAVPALAALVASQHEVVMVLTQPDRPAG-RGMKLKASPVKELALQHQ 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P + Q + ADV +V AYGL+IP +LN LG YN HASLLPRWRG
Sbjct: 60 IPVLQPETLKDADIQAQIAAVEADVMIVAAYGLIIPTSVLNMPALGCYNIHASLLPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQRA++AGD ETG+ IM++ LD G + +PI+ L LS + A M
Sbjct: 120 AAPIQRALLAGDAETGVTIMEVVPALDAGAMVEKGVLPITERDTAQSLHDGLSAMGAQLM 179
Query: 179 VEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
V+AMD L P PQ E +TYA K+ K E +++ +SAE + +RA +PFP A
Sbjct: 180 VKAMDTLATQRSLPAEPQDEALVTYAAKLQKAEAGIDWTQSAEAISRQVRAFNPFPVAQA 239
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVIN--PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++ ++ + ++G +PG V++ + C QG +RI LQ GG+ L
Sbjct: 240 KLNED----ICRIWMATAMDGNAEPGVVVSVGDAIVVGCGQGLLRIEELQMPGGKRLQAA 295
Query: 296 DFLLGCPVIIGCIV 309
F+ G + G
Sbjct: 296 QFMAGHALKPGDRF 309
>gi|294811535|ref|ZP_06770178.1| Methionyl-tRNA formyltransferase [Streptomyces clavuligerus ATCC
27064]
gi|326440078|ref|ZP_08214812.1| methionyl-tRNA formyltransferase [Streptomyces clavuligerus ATCC
27064]
gi|294324134|gb|EFG05777.1| Methionyl-tRNA formyltransferase [Streptomyces clavuligerus ATCC
27064]
Length = 320
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 158/313 (50%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MKLVFAGTPEVAVPALDALIASERHEVAAVVTRPDAPAG-RGRRLVASPVAQRAEEAGIE 59
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P E++ D VVAYG ++PQ L+ G+ N H SLLP WRGAA
Sbjct: 60 VLKPASPRDEDFLARLREIGPDCCPVVAYGALLPQVALDVPARGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A++AGD TG + ++++ LD+GPV + + + L L+ A +
Sbjct: 120 PVQHAVLAGDELTGASTFQIERGLDSGPVYGVLTEGVRPTDTSGDLLTRLAFAGAGLLTA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ G++ A K++ + RV++ A V +R +P PGAW E
Sbjct: 180 TMDGIEDGTLTAVPQPAEGVSLAPKLTVDDARVDWHAPALRVDRVVRGCTPAPGAWTEF- 238
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+KL+ +LV PG + + + AV ++ +Q G + + D
Sbjct: 239 ---RGERLKLVSVRLVPDRADLAPGALAAGKNDVHVGTGSHAVELLWVQPQGKKPMKAAD 295
Query: 297 FLLGCPVIIGCIV 309
+ G + G +
Sbjct: 296 WARGVRIAPGEHL 308
>gi|325269065|ref|ZP_08135686.1| methionyl-tRNA formyltransferase [Prevotella multiformis DSM 16608]
gi|324988686|gb|EGC20648.1| methionyl-tRNA formyltransferase [Prevotella multiformis DSM 16608]
Length = 337
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 101/337 (29%), Positives = 160/337 (47%), Gaps = 28/337 (8%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M +R+VFMGT EFAV +L+ALV + +++V+V TQP +P GR SAV + A E
Sbjct: 1 MKKEDIRIVFMGTPEFAVESLKALVENGYNVVAVVTQPDKPVGRHQDTLQPSAVKRYAVE 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P K+ + + L VV ++P+ + + G +N HA+LLP++R
Sbjct: 61 CGLPVLQPVKMKDPVFMEQLRAYKADLQVVVAFRMLPEAVWAMPRFGTFNVHAALLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ G+ ETG+ +DK +DTG + + PI + + L L A A
Sbjct: 121 GAAPINWAVINGETETGVTTFFLDKDIDTGRIILQKPFPIPDTADVEYVYDGLMYLGAEA 180
Query: 178 MVEAMD---------------KLEQNNLPLSPQIENGI--TYAEKISKGETRVNFCRSAE 220
+E +D + PQ GI A KI K + + + ++
Sbjct: 181 AMETVDLIASRLPEKALGEAGFRHILDGVSRPQPCAGIDLHPAPKIFKETCEICWQQPSK 240
Query: 221 NVHNHIRALSPFPGAWLEMMIGNKHE----RIKLLESQLVE-GEGKPG---EVINPNFTI 272
+++ IR LSP+PGAW + E IK+ ++ + PG V +
Sbjct: 241 KIYDFIRGLSPYPGAWSVLHAVEGEEGKAIPIKIFKTAGTDRKSLAPGGMLIVERNRLYV 300
Query: 273 ACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ + + ++ +Q AG R +D+ FL G I G
Sbjct: 301 STADRLLELLDVQLAGKRRMDVKAFLNGFKDIDGYRF 337
>gi|189463823|ref|ZP_03012608.1| hypothetical protein BACINT_00156 [Bacteroides intestinalis DSM
17393]
gi|189438773|gb|EDV07758.1| hypothetical protein BACINT_00156 [Bacteroides intestinalis DSM
17393]
Length = 323
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 103/318 (32%), Positives = 164/318 (51%), Gaps = 14/318 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV +L+ LV +++V V T P +PAG RG K S V + A E
Sbjct: 2 MKKEDLRIVYMGTPDFAVESLRCLVEGGYNVVGVITMPDKPAG-RGHKLQFSPVKQYALE 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+LP L P KL E + + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 61 QNLPLLQPEKLKDEVFVEALREWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V ++PI+ N + +L +L
Sbjct: 121 GAAPINWAVINGDTETGITTFFLRHEIDTGEVIQQVRIPIADTDNVGIVHDKLMMLGGKL 180
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ E +D + + + PQ E I A KI K R+++ + + +++ IR LSP+P
Sbjct: 181 VTETVDAILNDAVKPIPQEEMAIVGELRPAPKIFKDTCRIDWNQPVKRIYDFIRGLSPYP 240
Query: 234 GAWLEM-MIGNKHERIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQRA 287
AW E+ + +K+ E++ + E PG ++ +A + G + I LQ
Sbjct: 241 TAWSELVQSDGEAVVVKIFETKKILKSHELAPGTLLTDGKTYIHVAAADGFIDIHALQLP 300
Query: 288 GGRVLDIGDFLLGCPVII 305
G + L + L G +
Sbjct: 301 GKKRLKTDELLRGFRLTE 318
>gi|304437065|ref|ZP_07397028.1| methionyl-tRNA formyltransferase [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304370016|gb|EFM23678.1| methionyl-tRNA formyltransferase [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 315
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 99/315 (31%), Positives = 138/315 (43%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSH--SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
+R VFMGT +FAVA L A+ IV+V TQP RP G RG K S V A
Sbjct: 3 PMRTVFMGTPDFAVAILAAMAERRDLTDIVAVVTQPDRPRG-RGKKLSPSPVKAWALSHD 61
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P + E+ + DVAVV A+G ++ Q IL+ G N HASLLP +RG
Sbjct: 62 IPVLQPARARDAAFAEELRALRPDVAVVAAFGQILTQEILDIPVHGCINVHASLLPLYRG 121
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQ A+M G TGI M+MD LDTG + R+VPI + L L A +
Sbjct: 122 AAPIQHAVMDGAKMTGITTMQMDAGLDTGDMLLRREVPIHRDTTYGTLHDALMKTGAALL 181
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
VE +++L L +PQ + S P + E
Sbjct: 182 VETLEQLAAGVLTRTPQTGES---SYAARITRETAQIDWSRTARELDALVRGLNPVPYAE 238
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+G+ +I +L + G ++ +A V++ +Q G R++
Sbjct: 239 THLGDARYKIGMLSLTGERTDAPHGTILTADRRAGLRVAAGDEIVQVTEIQAPGKRMMAA 298
Query: 295 GDFLLGCPVIIGCIV 309
DFL G + G
Sbjct: 299 SDFLNGFALTTGARF 313
>gi|294643619|ref|ZP_06721422.1| methionyl-tRNA formyltransferase [Bacteroides ovatus SD CC 2a]
gi|292641053|gb|EFF59268.1| methionyl-tRNA formyltransferase [Bacteroides ovatus SD CC 2a]
Length = 323
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 108/322 (33%), Positives = 167/322 (51%), Gaps = 15/322 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A E
Sbjct: 1 MKKEDLRIVYMGTPDFAVEALRQLVEGGYNVVGVITMPDKPAG-RGHKIQYSPVKQYALE 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+LP L P KL E + + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 60 QNLPLLQPEKLKDEAFVEALREWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V +VPI+ N + +L +L
Sbjct: 120 GAAPINWAVINGDTETGITTFFLKHEIDTGEVIQQVRVPIADTDNVEVVHDKLMMLGGKL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
++E +D + + PQ + + A KI K R+++ + + +++ IR LSP+P
Sbjct: 180 VLETVDAILNGTVKPIPQEDMAVVGELRPAPKIFKETCRIDWNQPVKKIYDFIRGLSPYP 239
Query: 234 GAWLEMMIGNKHE--RIKLLESQLVEGEGK--PGEVINPN---FTIACSQGAVRIMRLQR 286
AW E++ K E +K+ ES+ V + G ++ +A G V I+ LQ
Sbjct: 240 AAWSELIASEKAESVVVKIFESEKVYESHQLVAGTIVTDGKKFMKVAVPDGFVSILSLQL 299
Query: 287 AGGRVLDIGDFLLGCPVIIGCI 308
G + L I + L G + GC
Sbjct: 300 PGKKRLKIDELLRGYHLEDGCK 321
>gi|237714418|ref|ZP_04544899.1| methionyl-tRNA formyltransferase [Bacteroides sp. D1]
gi|262408248|ref|ZP_06084795.1| methionyl-tRNA formyltransferase [Bacteroides sp. 2_1_22]
gi|294806132|ref|ZP_06764984.1| methionyl-tRNA formyltransferase [Bacteroides xylanisolvens SD CC
1b]
gi|229445582|gb|EEO51373.1| methionyl-tRNA formyltransferase [Bacteroides sp. D1]
gi|262353800|gb|EEZ02893.1| methionyl-tRNA formyltransferase [Bacteroides sp. 2_1_22]
gi|294446646|gb|EFG15261.1| methionyl-tRNA formyltransferase [Bacteroides xylanisolvens SD CC
1b]
Length = 324
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 108/322 (33%), Positives = 167/322 (51%), Gaps = 15/322 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A E
Sbjct: 2 MKKEDLRIVYMGTPDFAVEALRQLVEGGYNVVGVITMPDKPAG-RGHKIQYSPVKQYALE 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+LP L P KL E + + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 61 QNLPLLQPEKLKDEAFVEALREWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V +VPI+ N + +L +L
Sbjct: 121 GAAPINWAVINGDTETGITTFFLKHEIDTGEVIQQVRVPIADTDNVEVVHDKLMMLGGKL 180
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
++E +D + + PQ + + A KI K R+++ + + +++ IR LSP+P
Sbjct: 181 VLETVDAILNGTVKPIPQEDMAVVGELRPAPKIFKETCRIDWNQPVKKIYDFIRGLSPYP 240
Query: 234 GAWLEMMIGNKHE--RIKLLESQLVEGEGK--PGEVINPN---FTIACSQGAVRIMRLQR 286
AW E++ K E +K+ ES+ V + G ++ +A G V I+ LQ
Sbjct: 241 AAWSELIASEKAESVVVKIFESEKVYESHQLVAGTIVTDGKKFMKVAVPDGFVSILSLQL 300
Query: 287 AGGRVLDIGDFLLGCPVIIGCI 308
G + L I + L G + GC
Sbjct: 301 PGKKRLKIDELLRGYHLEDGCK 322
>gi|309389022|gb|ADO76902.1| methionyl-tRNA formyltransferase [Halanaerobium praevalens DSM
2228]
Length = 314
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 94/316 (29%), Positives = 162/316 (51%), Gaps = 14/316 (4%)
Query: 3 LRVVFMGTSEFAVATLQAL-VSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT EFAV L L I +V TQP R +G RG K S + +KA L
Sbjct: 1 MKIIFMGTPEFAVPALVELENDEEIEIKAVVTQPDRKSG-RGQKINYSDIKEKALALDLE 59
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L + Q+++ + D VVVA+G + +L K G N HASLLP++RG++
Sbjct: 60 ILQSENVNQKDFLEKLKEIEPDFIVVVAFGQKLSPELLAIPKFGCINLHASLLPKYRGSS 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI +AI+ G ++TG M M + D G + + +++ I + L +++ A+ +++
Sbjct: 120 PIHKAIIDGKSKTGNTTMYMAEGWDDGDIIYQQEIEIKRDDTVGDLHDKMAKKGANLLLK 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ P Q ++ T+A KI K +++ + AEN++N IR ++P+PGA+ +
Sbjct: 180 TLKDIKTAEAPKISQNDSEATFAYKIDKSLGSIDWNQKAENIYNLIRGVNPWPGAYSVL- 238
Query: 241 IGNKHERIKLLESQLVE---GEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLD 293
E+IK+ ES++ + KPG +I + + G + I +LQ GG+ +D
Sbjct: 239 ---NGEKIKIWESKISDYPDTNLKPGTIIKANQKDGILVQTASGVISIEKLQLPGGKKID 295
Query: 294 IGDFLLGCPVIIGCIV 309
FL G +
Sbjct: 296 YYSFLNGHQLPEKEKF 311
>gi|257059429|ref|YP_003137317.1| methionyl-tRNA formyltransferase [Cyanothece sp. PCC 8802]
gi|256589595|gb|ACV00482.1| methionyl-tRNA formyltransferase [Cyanothece sp. PCC 8802]
Length = 332
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 106/331 (32%), Positives = 161/331 (48%), Gaps = 25/331 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++F+GT +FA+ TLQ L+ ++ V TQP + G RG + + SA+ K A E L
Sbjct: 1 MKIIFLGTPQFAIPTLQKLLDHPDFDVIGVVTQPDKRRG-RGNQLIPSAIKKIALEHGLT 59
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L + Q AD VVVAYG ++ IL KLG N H S+LP++RGA
Sbjct: 60 VWQPKNLKKARTTLSQLKEAQADAFVVVAYGQLLSSEILAMPKLGCINVHGSILPQYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ +I GD ETGI M MD+ +DTG + PI N L ++L+ A ++
Sbjct: 120 APIQWSIYHGDKETGITTMLMDEGMDTGAMLIKAYTPIQLLDNAHELAEKLAQQGADLLI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL+ ++ + Q + TYA I K + V++ + A +HN +RA P
Sbjct: 180 ETLQKLKLGDITATAQDNDQATYAPLIEKSDYIVDWTKPAIAIHNQVRAFYPNCVTTFRN 239
Query: 240 MIGNKHERIKLLESQ-----------------LVEGEGKPGEVIN--PNF--TIACSQGA 278
I L ++ L + GKPGEV++ NF I +G
Sbjct: 240 QSLKIMATIPLGDTYWEQLSEEFQKLQQQTKMLSDVTGKPGEVVSIIKNFGAVIQTGEGL 299
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ + +Q +G R DF+ G + +G I+
Sbjct: 300 LLLKEVQLSGKRQQSGWDFVNGTRLEVGEII 330
>gi|297588337|ref|ZP_06946980.1| methionyl-tRNA formyltransferase [Finegoldia magna ATCC 53516]
gi|297573710|gb|EFH92431.1| methionyl-tRNA formyltransferase [Finegoldia magna ATCC 53516]
Length = 310
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 96/312 (30%), Positives = 161/312 (51%), Gaps = 5/312 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M ++VF G+ +FAV +LQ L + ++ I V +Q + R K +AV KKA E
Sbjct: 1 MKNKIVFAGSPDFAVESLQRLYDNPNNEIQLVISQQDKKRNR--NKFSPTAVKKKAMELG 58
Query: 60 LPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ + P + +E L N D VVVAYG +I +RIL+ K N HAS+LP++RG
Sbjct: 59 IDVITPQNINDDEVFDLLDNLNPDFIVVVAYGQLIKKRILDRFKNKILNVHASILPKYRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+PI +++ GD E+G++IM +++ LDTG V + K+ + +I L +L ++ A +
Sbjct: 119 ASPINYSLLNGDKESGVSIMLVEQGLDTGDVLAIDKIELDKDIMLEELHDKLMIMGADLI 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ ++ ++ Q EN + KI K +NF A+ ++N R L+P+PG + +
Sbjct: 179 DKVINDYQKYFDSREKQNENQASTVGKIQKSMGEINFNEKADVIYNKFRGLTPWPGLFFK 238
Query: 239 MMIGNKH-ERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ I ++E G+ +V IAC G + I RLQ + L++ ++
Sbjct: 239 LNDKIVKVHNINIIEQYNDNKNGEVVKVDKNGIKIACEDGFIIITRLQLPNKKPLNVSEY 298
Query: 298 LLGCPVIIGCIV 309
L G G I+
Sbjct: 299 LNGNSFEEGIIL 310
>gi|319401491|gb|EFV89701.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis
FRI909]
Length = 310
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 107/316 (33%), Positives = 172/316 (54%), Gaps = 14/316 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ +++FMGT +F+ L+ L+ + H +++V TQP RP G R V + A + +
Sbjct: 1 MS-KIIFMGTPDFSTKVLEMLI-AEHEVIAVVTQPDRPVG-RKKVMTPPPVKRVATKHQI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K +E + LS +D+ V A+G ++P+ +LNA KLG N HASLLP++RG
Sbjct: 58 PVYQPEKLKDSQELDMLLSLESDLIVTAAFGQLLPESLLNAPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N + +LS L A +
Sbjct: 118 APIHQAIIDGEEETGITIMYMVKKLDAGNIISQQSIRIEEEDNVGTMHDKLSFLGAELLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + N PQ + T+A I + + R+++ SA+ +HNHIR LSP+P A+ M
Sbjct: 178 KTLPSIIDNTNDSIPQDDALATFASNIRREDERIDWNMSAQAIHNHIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE-GKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLDI 294
N +KL + +V+G+ G PG +I IA A+ + +Q AG + + +
Sbjct: 238 NEKN----LKLFSAFIVKGKKGNPGTIIEATKHELIIATGSDDAIALTEIQPAGKKRMKV 293
Query: 295 GDFLLGCPVI-IGCIV 309
D+L G +G ++
Sbjct: 294 TDYLSGVQESLVGKVL 309
>gi|196229641|ref|ZP_03128505.1| methionyl-tRNA formyltransferase [Chthoniobacter flavus Ellin428]
gi|196225967|gb|EDY20473.1| methionyl-tRNA formyltransferase [Chthoniobacter flavus Ellin428]
Length = 313
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 109/314 (34%), Positives = 164/314 (52%), Gaps = 7/314 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R +FMGT E V L L+ S +V+V TQP +P G R + A + A + +P
Sbjct: 1 MRAIFMGTGEIGVPALTWLLDSPEWEVVAVVTQPDKPVG-RKQELHAPATKQLALQRGVP 59
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K E + ++ ADV VV+AYG ++P+ +L+A +L N HASLLPRWRGAA
Sbjct: 60 VLQPIKLRTPESVAEIVALQADVIVVMAYGQILPKSVLDAPRLACLNLHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI AGD +G+ +M M + LDTG + M + PIS L L+ + A AM E
Sbjct: 120 PIQAAIEAGDAASGVTVMYMAEGLDTGDILLMHETPISVQDTGGSLHDRLADVAAAAMAE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ + + P +PQ E YA K+S+ +++ + + IRA++P+P A +
Sbjct: 180 ALPLVAAGHAPRTPQDEARANYAPKLSRENGLIDWKATPAQIDLRIRAMNPWPAAHTFLP 239
Query: 241 IGNKHERIKLLESQLVEG-EGKPGEVINP---NFTIACSQGAVRIMRLQRAGGRVLDIGD 296
++K+ L G G GEV+ ++ G V + +Q G R + G+
Sbjct: 240 TPAGPRQLKVFGCALQSGGSGASGEVLRADAQGLLVSAQGGTVLLNEIQLEGKRRMPAGE 299
Query: 297 FLLGCPVIIGCIVG 310
FL G + G I+G
Sbjct: 300 FLRGHSIAPGTILG 313
>gi|270157754|ref|ZP_06186411.1| methionyl-tRNA formyltransferase [Legionella longbeachae D-4968]
gi|289163977|ref|YP_003454115.1| methionyl-tRNA formyltransferase [Legionella longbeachae NSW150]
gi|269989779|gb|EEZ96033.1| methionyl-tRNA formyltransferase [Legionella longbeachae D-4968]
gi|288857150|emb|CBJ10966.1| putative methionyl-tRNA formyltransferase [Legionella longbeachae
NSW150]
Length = 317
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 102/304 (33%), Positives = 159/304 (52%), Gaps = 7/304 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L +VF GT F + L AL+ S+H + ++YTQP RPAG RG K SAV + A + +P
Sbjct: 4 LNIVFAGTPAFGIPCLDALLHSNHHLQAIYTQPDRPAG-RGRKLQSSAVKEWALKHQIPV 62
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + D+ VV+AYGL++P+ +L+ LG N HASLLPRWRGA+P
Sbjct: 63 YQPINFKNPDAIAELNALKPDIMVVIAYGLILPKAVLDTPGLGCINVHASLLPRWRGASP 122
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ AI+ GD E+G+ IM+MD LDTG + PI+S + L +L+ + A +++
Sbjct: 123 IQSAILHGDQESGVTIMQMDVGLDTGAMLNKVICPITSTETASSLHDKLAQIAAQPLIDT 182
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+++L Q TYA KI K + +N+ ++A + IRA +P+P A+
Sbjct: 183 LNQLANQTAKPEIQNNELATYASKIKKEDACINWQQTATEIDQKIRAFNPWPIAYTIFG- 241
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
++ R+ + PG VI +A + + ++Q G +V+ I D+L
Sbjct: 242 -HEILRVHQAKIIATPFAQAPGTVISIDKKGLLVATGSQGLLVEKIQLPGAKVITIADWL 300
Query: 299 LGCP 302
Sbjct: 301 NSSK 304
>gi|15673875|ref|NP_268050.1| methionyl-tRNA formyltransferase [Lactococcus lactis subsp. lactis
Il1403]
gi|13878482|sp|Q9CEE9|FMT_LACLA RecName: Full=Methionyl-tRNA formyltransferase
gi|12724928|gb|AAK05991.1|AE006419_1 methyonyl-tRNA formyltransferase [Lactococcus lactis subsp. lactis
Il1403]
Length = 319
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 95/323 (29%), Positives = 163/323 (50%), Gaps = 18/323 (5%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
MT +++FMGT +FA L+ L+ S+ + I++V TQP R G R + ++ V + A
Sbjct: 1 MTKTKIIFMGTPQFAATVLKGLIDSNQYEILAVVTQPDRKVG-RKQELRMTPVKELALTV 59
Query: 59 SLPALVPTK---LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+LP L P K + L + +V +V A L N HASLLP+
Sbjct: 60 NLPVLQPEKLSGSVEMTQIMTLLESGEVGIVTAAFGQFLPGKLLDVAQFAVNTHASLLPK 119
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+RG API AIM G+ E G+ IM+M + +D G + PI + N + ++L+++
Sbjct: 120 YRGGAPIHYAIMNGEKEAGVTIMEMIRKMDAGDMIAQDSTPILEDDNVGTMFEKLALVGR 179
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
++E + K L Q E+ +T++ IS E ++++ +SA + N +R ++PFP A
Sbjct: 180 DLLLETLPKYLSGQLKAQAQNEDEVTFSPNISPEEEKIDWNKSAREIFNKVRGMNPFPVA 239
Query: 236 WLEMMIGNKHERIKLLESQLVE---GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGG 289
ER K+ E+++V+ G + GE++ + +A +G + ++ +Q AG
Sbjct: 240 HTT----WNGERFKIYETKVVDDSVGNLQAGEIVEKTKKSLKVATGEGLLELLFVQPAGK 295
Query: 290 RVLDIGDFLLGC--PVIIGCIVG 310
+DI FL G + +G G
Sbjct: 296 PKMDIVSFLNGLGQKIQVGDKFG 318
>gi|312886034|ref|ZP_07745661.1| methionyl-tRNA formyltransferase [Mucilaginibacter paludis DSM
18603]
gi|311301491|gb|EFQ78533.1| methionyl-tRNA formyltransferase [Mucilaginibacter paludis DSM
18603]
Length = 306
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 138/310 (44%), Gaps = 14/310 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT EFAVA+L ALV + ++IV+V T P +PAG RG K SAV + A L
Sbjct: 2 MKIIFMGTPEFAVASLDALVKAGNNIVAVITAPDKPAG-RGQKINESAVKQYAVNNGLKV 60
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E+ L VV ++P+ + + G N HASLLP +RGAAPI
Sbjct: 61 LQPEKLRNPEFLAELKALQADLQVVVAFRMLPEVVWSMPPKGTINLHASLLPHYRGAAPI 120
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ ++G++ + + +DTG + F VPIS L L A +V+ +
Sbjct: 121 NWAVINGEKQSGVSTFFLKQEIDTGDILFTESVPISETDTAGDLHDTLMATGAALLVKTV 180
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+E + PQ K + + S + L +
Sbjct: 181 KAIETGDYQEQPQQALAEGIELKHAPKIFKETCEISWLQSTESVYNLIRGLSPYPTAFTV 240
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPN---------FTIACSQGAVRIMRLQRAGGRVLD 293
+ K+ ++ + +PG I+ AC+ G + +Q G + +
Sbjct: 241 LNGKVFKIFKAD--KQMSEPG--ISAGGFLTDQKTFLKFACTDGFICPTDVQLEGKKRMG 296
Query: 294 IGDFLLGCPV 303
I +FL G +
Sbjct: 297 IEEFLRGVRL 306
>gi|306820769|ref|ZP_07454394.1| methionyl-tRNA formyltransferase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551159|gb|EFM39125.1| methionyl-tRNA formyltransferase [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 329
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 96/314 (30%), Positives = 160/314 (50%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ +FMGT FA+ +L L+S I V T+ G R +K+ S V +A+E ++
Sbjct: 20 MKAIFMGTPVFALNSLNTLISLGIEIPLVVTKEDARQG-RKMKTGESPVKMRAREANIDI 78
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P+ ++ N DV VV AYG V+P+ IL+ K G N HASLLP++RGA+P
Sbjct: 79 LQPSSLKDEDVIRIIRDINPDVIVVTAYGKVLPREILDIPKFGCINVHASLLPKYRGASP 138
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I I+ GD TGI M M++ LD G + ++ I + ++ L ++L+ L +
Sbjct: 139 INSCILDGDTITGITTMYMNEKLDEGDIILQDELAIEPDDDSQTLTEKLAKLSEKTLENT 198
Query: 182 MDKLEQNN-LPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + N +P Q E +Y +SK + +N+ ++A+ + N IR L P+P A+
Sbjct: 199 LKMMMMNIEIPRIEQDETKSSYCTLLSKEKGHINYYKTADEIINTIRGLQPWPCAYSFYN 258
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
N K+ +++ + +PG + + +A S + I LQ AG + ++I
Sbjct: 259 ENNI----KIFKAEKTNEKSVNQPGTIVKSLKDKLIVATSTYDISINELQLAGKKRMNIS 314
Query: 296 DFLLGCPVIIGCIV 309
DFL G + G I+
Sbjct: 315 DFLRGNKLSEGEIL 328
>gi|205373321|ref|ZP_03226125.1| methionyl-tRNA formyltransferase [Bacillus coahuilensis m4-4]
Length = 316
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 93/317 (29%), Positives = 156/317 (49%), Gaps = 12/317 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT R+VFMGT +F+V L L+ +++V V TQP RP G R V +A + +
Sbjct: 1 MT-RIVFMGTPDFSVPVLNTLIEDGYNVVGVVTQPDRPVG-RKRVLTPPPVKVEALKHDI 58
Query: 61 PALVPTKLGQEEYEQFL-SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P ++ +E + + + D+ V A+G ++P+ +L+A G N HASLLP RG
Sbjct: 59 TVLQPERIRLKEEVEKVLALQPDLIVTAAFGQILPKELLDAPPFGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +I+ G ++TGI IM M + LD G + +V I + L +LS A +
Sbjct: 119 APIHYSIIQGKDKTGITIMYMVEALDAGDMISQVEVVIEERDHVGSLHDKLSKAGASLLS 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + + PQ + T+A I + + +++ ++ E ++NHIR L P+P A+ +
Sbjct: 179 ETIPKLLKKEITPIPQNDEDATFARNIKREQEMIDWSKTGEAIYNHIRGLHPWPVAFTTL 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGE---VINPNFTIACSQG-AVRIMRLQRAGGRVLDIG 295
+ ++ G GE + + +A A+++ +Q AG +
Sbjct: 239 ---DDAAIKVWWGEKVHGKSGSVGEIISIDSDGIIVATGDDTAIKLTEIQPAGKNRMTAE 295
Query: 296 DFLLG--CPVIIGCIVG 310
D L G +G +G
Sbjct: 296 DLLRGSNHGFKVGLRLG 312
>gi|313677557|ref|YP_004055553.1| methionyl-tRNA formyltransferase [Marivirga tractuosa DSM 4126]
gi|312944255|gb|ADR23445.1| methionyl-tRNA formyltransferase [Marivirga tractuosa DSM 4126]
Length = 297
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 95/302 (31%), Positives = 158/302 (52%), Gaps = 11/302 (3%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +FAV +L+ LV +++ IV+V T P +P G RG K S V + A LP L PT
Sbjct: 1 MGTPDFAVPSLEILVENNYDIVAVITAPDKPKG-RGQKLSQSPVKEYALSVGLPVLQPTN 59
Query: 68 LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127
L E+++ L +V ++P+ + + ++G +N HASLLP++RGAAPI A+M
Sbjct: 60 LKDPEFQKELKSLNANLQIVVAFRMLPEAVWSMPEIGTFNLHASLLPQYRGAAPIHWAVM 119
Query: 128 AGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQ 187
G+ ETG+ + +DTG V K IS N T + L A +++ + +E
Sbjct: 120 NGETETGLTTFFLKHEIDTGSVILQEKEAISPNDTTGEVYSRLMKKGAGLVLKTVKAIEN 179
Query: 188 NNLPLSPQIENGI-TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ L+ Q EN +A K+ K T +++ AE ++N++R L+PFP AW + +
Sbjct: 180 EDYDLTAQDENQELKHAPKLFKENTELDWNEPAEKLYNYVRGLNPFPTAWAII----NDK 235
Query: 247 RIKLLESQLVEGE--GKPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+ K+ +S +++ G+ G++ I C G + + +Q G + + I DF G
Sbjct: 236 KYKIHQSSIIDANKSGEIGKINTDHKSYLHIQCKPGILALKVIQPEGKKRMGIADFFRGN 295
Query: 302 PV 303
+
Sbjct: 296 DI 297
>gi|258592638|emb|CBE68947.1| Methionyl-tRNA formyltransferase [NC10 bacterium 'Dutch sediment']
Length = 311
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 107/314 (34%), Positives = 164/314 (52%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV FMGT FA+ +L AL+++ H I V TQP RPAG RG V AQE LP
Sbjct: 1 MRVSFMGTPAFALPSLTALMAAGHDICLVVTQPDRPAG-RGRVPTPPPVKLAAQELGLPI 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K+G+ + + +VVAYG ++P+ IL G N HASLLP++RGAAP
Sbjct: 60 LQPEKVGESAIISALQAAQPEAIIVVAYGQLLPKPILTLPPYGCLNLHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I +AI+ G+ TG+ IM+++ +D GP+ ++ PI + + L+V+ + + +A
Sbjct: 120 IPQAIIQGETATGVTIMQIEARMDAGPILMQQREPIGPRDTAGTVGERLAVIGSQLLCQA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D++ + + PQ E TYA K++ G+T +++ R A + IR L P PGA
Sbjct: 180 IDQVARKTVHPIPQDEGLATYAPKLTVGDTHLDWARDARILDCLIRGLCPVPGAATSFEG 239
Query: 242 GNKHERIKLLESQLVE-GEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R+K+LE+ + + PG V IA G + + ++Q RV+
Sbjct: 240 R----RVKVLEATVEAVVDPSPGTVCAVDQKKGILIAARSGGLWLAQVQPENRRVMTAAA 295
Query: 297 FLLGCPVIIGCIVG 310
F G V G + G
Sbjct: 296 FASGYRVRPGDVFG 309
>gi|116492596|ref|YP_804331.1| methionyl-tRNA formyltransferase [Pediococcus pentosaceus ATCC
25745]
gi|122265940|sp|Q03FY3|FMT_PEDPA RecName: Full=Methionyl-tRNA formyltransferase
gi|116102746|gb|ABJ67889.1| methionyl-tRNA formyltransferase [Pediococcus pentosaceus ATCC
25745]
Length = 320
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 170/316 (53%), Gaps = 18/316 (5%)
Query: 3 LR-VVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
++ ++FMGT EF+ LQ+L+ ++ ++ V TQP R G R S V K A + +
Sbjct: 1 MKSIIFMGTPEFSAPILQSLIDEPNYDVIGVVTQPDRKVG-RKHVLTPSPVKKVAVKNDI 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K G E + ++ NAD+ V A+G +P ++N+ K+G N HASLLP++RG
Sbjct: 60 KVYQPEKLSGSAELTELIALNADLIVTAAFGQFLPMSLINSVKIGAVNVHASLLPKYRGG 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ AIM GD ETG+ I+ M K +D G + K+PI+ + + ++LS+L ++
Sbjct: 120 APVHYAIMNGDKETGVTIIYMVKKMDAGEMLATAKIPITDQDDVGTMFEKLSLLGRDLLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + +L + N+ Q E ++++ IS E ++ A V +R L PFP A+
Sbjct: 180 DTLPQLIEGNVQPVKQDEEQVSFSPNISPEEEEIDINLPARLVDAKVRGLRPFPVAYF-- 237
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEVINP---NFTIACSQ-GAVRIMRLQRAGGRVLD 293
+ +R K+ ++++++ + KPG+V++ +A + G + I LQ AG + +
Sbjct: 238 --MMEGKRTKIWKTKVIDQTTDLKPGQVVSKTKHELLVATGEHGVISIEELQPAGKQKMT 295
Query: 294 IGDFLLGCPVIIGCIV 309
I D+L G +G +
Sbjct: 296 ITDYLNG----VGENL 307
>gi|261364699|ref|ZP_05977582.1| methionyl-tRNA formyltransferase [Neisseria mucosa ATCC 25996]
gi|288566989|gb|EFC88549.1| methionyl-tRNA formyltransferase [Neisseria mucosa ATCC 25996]
Length = 308
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 121/313 (38%), Positives = 175/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++S I V TQP RP G RG++ S V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAASFEIPLVLTQPDRPKG-RGMQLAPSPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 AQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L L A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMSLGAAAIVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+SK E R+++ SA + IRA +P P AW+E
Sbjct: 180 DLQQLKTEGRLKSVKQPEEGVTYAQKLSKEEARIDWNESATVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +G+ GEV++ +AC + A++I LQ +G + + I
Sbjct: 240 QG----KPMKIWRAEVVAQQGRAGEVLSCSADGLVVACGENALKITELQPSGSKRMPIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G + +G ++
Sbjct: 296 FAAGHKIEVGTVL 308
>gi|167568292|ref|ZP_02361166.1| methionyl-tRNA formyltransferase [Burkholderia oklahomensis C6786]
Length = 327
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYALEHGIA 62
Query: 62 ALV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
+ + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRTGKYPAEAAAALDLLHATPHDVMVVAAYGLLLPQEVLDLPRHGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD +TG+ +M+MD LDTG + +V I+ + TA L +L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAQTGVTLMQMDAGLDTGAMLHDARVAIAPDDTTATLHDKLAA 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V+ + +LE+ +PQ +G+TYAEKI K E +++ + A + +RA P
Sbjct: 183 AGARLIVDTLAELEREGSLVATPQPADGVTYAEKIGKHEAALDWHKPAAVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ E+ G+G PG +++ IAC +GA+R+ +LQ+ G
Sbjct: 243 FPGGAGTL--DGTTLKLWAAEAVAAPGDGAPGTIVDAGPDGVVIACGEGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ G
Sbjct: 301 GKRLPAREFLAGAPLAAGQRF 321
>gi|238021728|ref|ZP_04602154.1| hypothetical protein GCWU000324_01631 [Kingella oralis ATCC 51147]
gi|237866342|gb|EEP67384.1| hypothetical protein GCWU000324_01631 [Kingella oralis ATCC 51147]
Length = 309
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 123/313 (39%), Positives = 170/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT +FA A L A+ ++ I V TQP RP G RG++ S V + AQ L
Sbjct: 1 MKIIFAGTPDFAAAALNAIAAAGFDIPLVLTQPDRPKG-RGMQLQASPVKQAAQALGLRV 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL +AD+ VV AYGL++PQ +L+A K G N HASLLPRWRGAA
Sbjct: 60 EQPEKLRGNAEALALLREMDADIMVVAAYGLILPQEVLDAPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV-LCAHAMV 179
PIQRAI AGD ETG+ IM+MD LDTG V + PI + + +L A +
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDAGLDTGAVVSEHRCPILPSDTANEVHDKLMQLGAAAIVA 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L +PQ ENGITYA+K+SK E ++N+ A V IRA +P P AW +
Sbjct: 180 DLQQLQLSGCLNATPQPENGITYAQKLSKDEAQINWQEDAATVSRKIRAFNPVPAAWTQ- 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + +K+ ++ V G G G V++ IAC GA+RI LQ AG + +
Sbjct: 239 ---WQGKPMKIWVAEAVAGNGAAGTVLSADASGIVIACGAGALRITELQPAGSKRMTAAA 295
Query: 297 FLLGCPVIIGCIV 309
FL G + +G +
Sbjct: 296 FLAGRELAVGKVF 308
>gi|304382267|ref|ZP_07364774.1| methionyl-tRNA formyltransferase [Prevotella marshii DSM 16973]
gi|304336624|gb|EFM02853.1| methionyl-tRNA formyltransferase [Prevotella marshii DSM 16973]
Length = 338
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 95/321 (29%), Positives = 157/321 (48%), Gaps = 19/321 (5%)
Query: 1 MTL---RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M R+VFMGT EFAVATL+ALV +++V+V TQP +P GR G SAV + A
Sbjct: 2 MKKSDVRIVFMGTPEFAVATLRALVEHEYNVVAVVTQPDKPVGRHGSVLRPSAVKEYALT 61
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P K+ E+ + L VV ++P+ + + + G +N HA+LLP++R
Sbjct: 62 CGLPILQPVKMKDPEFVEQLRSYRADLQVVVAFRMLPEVVWDMPRYGTFNVHAALLPQYR 121
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPIQ A++ G+ +TG+ +D+ +DTG + R I + + + L L A
Sbjct: 122 GAAPIQWAVINGEKQTGVTTFFLDRDIDTGRIIKQRPFDIPDDADAEYVYNGLMHLGAQV 181
Query: 178 MVEAMDKLEQNNLPLSPQIENGI-------TYAEKISKGETRVNFCRSAENVHNHIRALS 230
+E +D+L + + + A K+ K ++++ + ++ +++ +R LS
Sbjct: 182 CLETLDELITCEGNVKSIAQEEMIPADATLHQAPKLFKETCQIDWQQGSKAIYDFVRGLS 241
Query: 231 PFPGAWLEMMIGN-------KHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRI 281
P PGAW ++ N ++ K E L G + + + G + I
Sbjct: 242 PAPGAWTNLLAPNGTQTVLKIYKTFKTHEESLFTETESVGSLCAERGRLLVKTTDGMLEI 301
Query: 282 MRLQRAGGRVLDIGDFLLGCP 302
LQ +G + + DFL G
Sbjct: 302 AELQLSGKKRMSGRDFLNGFR 322
>gi|169824359|ref|YP_001691970.1| methionyl-tRNA formyltransferase [Finegoldia magna ATCC 29328]
gi|254789355|sp|B0S140|FMT_FINM2 RecName: Full=Methionyl-tRNA formyltransferase
gi|167831164|dbj|BAG08080.1| methionyl-tRNA formyltransferase [Finegoldia magna ATCC 29328]
Length = 310
Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats.
Identities = 94/312 (30%), Positives = 161/312 (51%), Gaps = 5/312 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M ++VF G+ +FAV +LQ L + ++ I V +Q + R K +AV K+A E
Sbjct: 1 MKNKIVFTGSPDFAVESLQRLYDNPNNEIQLVISQEDKKRNR--NKFSPTAVKKRAMELG 58
Query: 60 LPALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ + P + EE N D VVVAYG +I +RIL+ K N HAS+LP++RG
Sbjct: 59 IDVITPKNINDEEVFDLLDKLNPDFIVVVAYGQLIKKRILDRFKNKILNVHASILPKYRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+PI +++ GD E+G++IM +++ LDTG V + K+ + + I L +L ++ A +
Sbjct: 119 ASPINYSLLNGDKESGVSIMLVEQGLDTGDVLAVDKIKLDNEIMLEELHDKLMIMGADLI 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ +D ++ Q EN + KI K ++NF ++ ++N R L+P+PG + +
Sbjct: 179 NKVIDDYQKYFDSRKEQNENEASIVGKIHKSMGQINFNEKSDVIYNKFRGLTPWPGLFFK 238
Query: 239 MMIGNKH-ERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ I +++ G+ +V +AC G + I RLQ + L+I ++
Sbjct: 239 LEDKIIKVHNINIIKQYNDNKNGEVVKVDKNGIKVACEDGFIIITRLQLPNKKPLNISEY 298
Query: 298 LLGCPVIIGCIV 309
L G G I+
Sbjct: 299 LNGNSFEEGIIL 310
>gi|326407446|gb|ADZ64517.1| methionyl-tRNA formyltransferase [Lactococcus lactis subsp. lactis
CV56]
Length = 319
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 95/323 (29%), Positives = 163/323 (50%), Gaps = 18/323 (5%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
MT +++FMGT +FA L+ L+ S+ + I++V TQP R G R + ++ V + A
Sbjct: 1 MTKTKIIFMGTPQFAATVLKGLIDSNQYEILAVVTQPDRKVG-RKQELRMTPVKELALTV 59
Query: 59 SLPALVPTK---LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+LP L P K + L + +V +V A L N HASLLP+
Sbjct: 60 NLPVLQPEKLSGSVEMTQIMTLLESGEVGIVTAAFGQFLPGKLLDVAQFAVNTHASLLPK 119
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+RG API AIM G+ E G+ IM+M + +D G + PI + N + ++L+++
Sbjct: 120 YRGGAPIHYAIMNGEKEAGVTIMEMIRKMDAGDMISQDSTPILEDDNVGTMFEKLALVGR 179
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
++E + K L Q E+ +T++ IS E ++++ +SA + N +R ++PFP A
Sbjct: 180 DLLLETLPKYLSGQLKAQAQNEDEVTFSPNISPEEEKIDWNKSAREIFNKVRGMNPFPVA 239
Query: 236 WLEMMIGNKHERIKLLESQLVE---GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGG 289
ER K+ E+++V+ G + GE++ + +A +G + ++ +Q AG
Sbjct: 240 HTT----WNGERFKIYETKVVDDSVGNLQAGEIVEKTKKSLKVATGEGLLELLFVQPAGK 295
Query: 290 RVLDIGDFLLGC--PVIIGCIVG 310
+DI FL G + +G G
Sbjct: 296 PKMDIVSFLNGLGQKIQVGDKFG 318
>gi|255690471|ref|ZP_05414146.1| methionyl-tRNA formyltransferase [Bacteroides finegoldii DSM 17565]
gi|260623920|gb|EEX46791.1| methionyl-tRNA formyltransferase [Bacteroides finegoldii DSM 17565]
Length = 322
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 107/321 (33%), Positives = 166/321 (51%), Gaps = 14/321 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A E
Sbjct: 1 MKKEDLRIVYMGTPDFAVEALRQLVEGGYNVVGVITMPDKPAG-RGHKIQYSPVKQYALE 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+LP L P KL E + + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 60 RNLPLLQPEKLKDEAFVEALREWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V +VPI+ N + +L +L
Sbjct: 120 GAAPINWAVINGDTETGITTFFLKHEIDTGEVIQQVRVPIADTDNVEVVHDKLMMLGGEL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
++E +D + + PQ E + A KI K R+++ + + V++ IR LSP+P
Sbjct: 180 VLETVDAILNGTVKPIPQEEMAVVGELRPAPKIFKDTCRIDWNQPVKKVYDFIRGLSPYP 239
Query: 234 GAWLEMM-IGNKHERIKLLESQLVEGEGK--PGEVINPN---FTIACSQGAVRIMRLQRA 287
AW E++ N+ +K+ E++ + + G V+ +A G V I+ LQ
Sbjct: 240 AAWSELVASENEAVVVKIFETEKMYESHQLSAGTVVTDGKKYIKVAVPDGFVSILSLQLP 299
Query: 288 GGRVLDIGDFLLGCPVIIGCI 308
G + L + L G + GC
Sbjct: 300 GKKRLKTDELLRGYRLADGCK 320
>gi|188585960|ref|YP_001917505.1| methionyl-tRNA formyltransferase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|229487503|sp|B2A2K2|FMT_NATTJ RecName: Full=Methionyl-tRNA formyltransferase
gi|179350647|gb|ACB84917.1| methionyl-tRNA formyltransferase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 313
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 166/317 (52%), Gaps = 15/317 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R +FMGT +F+V ++A+ S+H++ V TQP R G RG + +KA+E +
Sbjct: 1 MRTIFMGTPDFSVPFIEAIARSTHNLNLVVTQPDRRKG-RGKELQPPPAKRKAEELGIDV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + Q LS + V AYG ++P++IL+ ++ N HASLLP +RGAAP
Sbjct: 60 FQPESIHNNYAYQILSDIEPHLIVTAAYGQILPRKILDLPRIKAINVHASLLPEYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RA+M G +TG+ IM+M +D G + V I T + +++ + ++E
Sbjct: 120 IHRAVMDGKEQTGVTIMEMCDKMDAGDILNYESVDIGKTDTTGDVYKQIITVGPQLLIET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENV-HNHIRALSPFPGAWLEMM 240
MD LE+N + Q EN ++YA K+ K + ++F + N +R L+P+PGA+ +
Sbjct: 180 MDLLEKNQVTPLKQDENQVSYAPKLKKEDEYLDFSKYTNTEVFNRVRGLNPWPGAFTKFE 239
Query: 241 IGNKHERIKLLESQLV-----EGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVL 292
+R+K+ E+++ KPGE+I + C QG+V + ++Q +G + +
Sbjct: 240 G----KRLKIWETKVHNSSSFNSNSKPGEIIEINQQGPVVKCCQGSVILTKIQPSGKKAM 295
Query: 293 DIGDFLLGCPVIIGCIV 309
F+ G + G +
Sbjct: 296 TGEQFIRGYDIKSGIQL 312
>gi|254440514|ref|ZP_05054008.1| methionyl-tRNA formyltransferase [Octadecabacter antarcticus 307]
gi|198255960|gb|EDY80274.1| methionyl-tRNA formyltransferase [Octadecabacter antarcticus 307]
Length = 302
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 132/301 (43%), Positives = 179/301 (59%), Gaps = 10/301 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT +F+V L AL+ + H I +VY+QPPRPAG RG K LS V +A+ L
Sbjct: 1 MRIIFMGTPDFSVPILNALLEAGHDICAVYSQPPRPAG-RGKKDRLSPVQARAETLGLNV 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L + + + D+AVVVAYGL++PQ +L+A +G N HASLLPRWRGAAP
Sbjct: 60 RTPVSLKDCDTQASFAALNADIAVVVAYGLILPQAVLDAPAMGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIM+GD +TG+ IM+MD LDTG V R+V I T L LS L A A+ +A
Sbjct: 120 IHRAIMSGDTQTGVCIMQMDAGLDTGVVLLRREVAIEIGETTGELHDRLSALGADAITDA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L PQ + G+TYA KI K E+RV++ ++ ++ N I ALSPFPGAW ++
Sbjct: 180 LGALPFLLPT--PQPDTGVTYAAKIDKSESRVDWSKATADIVNQINALSPFPGAWSQVG- 236
Query: 242 GNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
ERIK L++ + G++ + + I GAVRI LQRAG + D L
Sbjct: 237 ---PERIKFLKAGAADTNLPAGQIKSTDGDLFIGTGNGAVRIHTLQRAGKKTASARDVLQ 293
Query: 300 G 300
G
Sbjct: 294 G 294
>gi|168216177|ref|ZP_02641802.1| methionyl-tRNA formyltransferase [Clostridium perfringens NCTC
8239]
gi|182381585|gb|EDT79064.1| methionyl-tRNA formyltransferase [Clostridium perfringens NCTC
8239]
Length = 317
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 92/318 (28%), Positives = 161/318 (50%), Gaps = 13/318 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FAV +L+ ++ ++ ++ TQP +P+G RG K +S + + +
Sbjct: 1 MKIVFMGTPDFAVPSLKKMIE-KFNVSAIVTQPDKPSG-RGKKVSISPIKEVELSNEILI 58
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ + D +VVAYG ++ + IL+ +LG HASLLP +RG+A
Sbjct: 59 FQPEKIRTDSVIINKLKELKPDFIIVVAYGQILTKEILDIPRLGCICLHASLLPMYRGSA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI ++ G+ +TG + MD +DTG + +V IS ++ L L + A + E
Sbjct: 119 PINWCLINGEIKTGNTTILMDTSIDTGNMLMRSEVEISESMTAGELYNLLKINGAELLEE 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA----W 236
++ + + Q +G +Y + ++K +N+ S+ N+HN IR LS +P W
Sbjct: 179 TINGIITGKICGIKQPNDGSSYVKMLNKQMANINWNDSSTNIHNLIRGLSSWPYKNINSW 238
Query: 237 LEMMIGNKHERIKLLESQLVEGE--GKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRV 291
L K +K+ +S+ +E PG +I+ +A G + I LQ GG+
Sbjct: 239 LTAYTYYKDIPVKIFKSKSLEANIIDPPGYIIDANDEGIKVATKNGILIIEILQFPGGKP 298
Query: 292 LDIGDFLLGCPVIIGCIV 309
L++ +FL G + G I+
Sbjct: 299 LEVKEFLKGNKIEKGIIL 316
>gi|257091705|ref|YP_003165346.1| methionyl-tRNA formyltransferase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044229|gb|ACV33417.1| methionyl-tRNA formyltransferase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 308
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 124/308 (40%), Positives = 177/308 (57%), Gaps = 12/308 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L+ ++++ H +V V TQP RP+G RG+ S V + A L
Sbjct: 1 MRLVFAGTPEFAALALRQILAAGHQVVLVLTQPDRPSG-RGMALRASPVKELANAAGLEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ + A+ VV AYGL++PQ +L+ G N HASLLPRWRGAAP
Sbjct: 60 FQPPTLRDALVQQRIRAAGAEAMVVAAYGLILPQAVLDMPSHGCINIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+AGD ETG++IM+M+ LD+GPV VPIS A L + L++L A +
Sbjct: 120 IQRAILAGDQETGVSIMQMEAGLDSGPVLLSASVPISDTDTAASLHETLALLGARLV--- 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D L + LP SPQ E GITYA KI K E +++ R A + +RA +PFPG+ +
Sbjct: 177 VDVLARLPLPASPQPEVGITYAAKIDKAEASLDWHRPAWQLARQVRAFNPFPGSTCCLDD 236
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+K+ ++ V G+G+PG V+ +AC + A+R+ LQ+AGGR L +L
Sbjct: 237 ----VPLKVWRAEAVAGDGRPGMVLRVERDGVVVACGEQALRLGELQKAGGRRLSAAQYL 292
Query: 299 LGCPVIIG 306
G + G
Sbjct: 293 AGTALSPG 300
>gi|298480266|ref|ZP_06998464.1| methionyl-tRNA formyltransferase [Bacteroides sp. D22]
gi|298273547|gb|EFI15110.1| methionyl-tRNA formyltransferase [Bacteroides sp. D22]
Length = 323
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 108/322 (33%), Positives = 165/322 (51%), Gaps = 15/322 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A E
Sbjct: 1 MKKENLRIVYMGTPDFAVEALRQLVEGGYNVVGVITMPDKPAG-RGHKIQYSPVKQYALE 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+LP L P KL E + + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 60 QNLPLLQPEKLKDEAFVEALREWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V +VPI+ N + L +L
Sbjct: 120 GAAPINWAVINGDTETGITTFFLKHEIDTGEVIQQVRVPIADTDNVEVVHDNLMMLGGKL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
++E +D + + PQ E + A KI K R+++ + + +++ IR LSP+P
Sbjct: 180 VLETVDAILNGTVKPIPQEEMAVVGELRPAPKIFKETCRIDWNQPVKKIYDFIRGLSPYP 239
Query: 234 GAWLEMMIGNKHE--RIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQR 286
AW E++ K E +K+ ES+ V + G ++ +A G V I+ LQ
Sbjct: 240 AAWSELIASEKAESVVVKIFESEKVYESHQLAAGTIVTDGKKFMKVAVPDGFVSILSLQL 299
Query: 287 AGGRVLDIGDFLLGCPVIIGCI 308
G + L + L G + GC
Sbjct: 300 PGKKRLKTDELLRGYHLEDGCK 321
>gi|17230952|ref|NP_487500.1| methionyl-tRNA formyltransferase [Nostoc sp. PCC 7120]
gi|21542045|sp|Q8YRI6|FMT_ANASP RecName: Full=Methionyl-tRNA formyltransferase
gi|17132593|dbj|BAB75159.1| methionyl-tRNA formyltransferase [Nostoc sp. PCC 7120]
Length = 342
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 106/340 (31%), Positives = 160/340 (47%), Gaps = 33/340 (9%)
Query: 3 LRVVFMGTSEFAVATLQAL-VSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKA------ 55
+++VF GT EFAV TL+ L ++ +++V TQP + RG K S V A
Sbjct: 1 MKIVFFGTPEFAVPTLEKLLINPEFDVLAVITQPDKRRE-RGNKLTPSPVKNVAMSYSQW 59
Query: 56 --QEFSLPALVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
LP P ++ ++ + + D VVVAYG ++PQ+ILN KLG N H S
Sbjct: 60 ENIAHDLPVWQPERIKKDTETLNRLKELDVDAFVVVAYGQILPQKILNIPKLGSVNVHGS 119
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
+LP++RGAAPIQ + G+ ETGI M MD +DTG + PI N + Q+LS
Sbjct: 120 ILPQYRGAAPIQWCLYNGETETGITTMLMDVGMDTGAMLLKATTPIGLLDNADDVAQKLS 179
Query: 172 VLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
V+ ++E + KL+Q + PQ TYA I K + +++ RSA +HN IR P
Sbjct: 180 VIGGDLLIETLHKLQQKEIQPIPQDNAAATYASLIQKQDYGLDWSRSALQLHNQIRGFYP 239
Query: 232 FPGAWLE---------------MMIGNKHERIKLLE--SQLVEGEGKPGEVINPNFTIA- 273
E K+L+ L + G PGEV++ +
Sbjct: 240 NCITTFRNQPLKITASFPLGAAYREELPPELQKMLQKLPDLSQISGSPGEVVSITKGVGA 299
Query: 274 ---CSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+G + + +Q G R DF+ G + +G ++G
Sbjct: 300 IAQTGEGLLLLREVQLPGKRPQSGWDFVNGTRLTVGEVLG 339
>gi|325104835|ref|YP_004274489.1| methionyl-tRNA formyltransferase [Pedobacter saltans DSM 12145]
gi|324973683|gb|ADY52667.1| methionyl-tRNA formyltransferase [Pedobacter saltans DSM 12145]
Length = 299
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 97/304 (31%), Positives = 152/304 (50%), Gaps = 13/304 (4%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +FAVA+L A++ + IV V T P +P+G RG K SAV K A E +L L P K
Sbjct: 1 MGTPDFAVASLDAMIKAGFDIVGVVTAPDKPSG-RGQKIAESAVKKYATEHNLKVLQPVK 59
Query: 68 LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127
L + L +V ++P+ + N G N HASLLP++RGAAPI AI+
Sbjct: 60 LKDPGFISELRALKADLQIVVAFRMLPEIVWNMPPKGTINLHASLLPQYRGAAPINWAIL 119
Query: 128 AGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQ 187
GD E+G+ + +DTG + F K+ I ++ L +L + A +V+ + +E
Sbjct: 120 NGDKESGVTTFFLQHEIDTGNILFKEKIDIQEDMTAGELHDKLMFVGAELLVKTIKAVES 179
Query: 188 NNLPLSPQIE---NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
+ PQ + + +A KI K + +++ + + V+N IR +SP+P A+ +
Sbjct: 180 GDYVEKPQDQFAAETLVHAPKIFKEDCEIDWNSNTKQVYNLIRGMSPYPTAFTSLNGKG- 238
Query: 245 HERIKLLESQLVEGEG--KPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+K+ ++ E K GE I N A S G + I LQ G + + I +FL
Sbjct: 239 ---LKIFAAEKQEKSVGIKAGEFITDNKTYLKFATSDGLISIKELQLEGKKRMKIDEFLR 295
Query: 300 GCPV 303
G +
Sbjct: 296 GTKL 299
>gi|323466285|gb|ADX69972.1| Methionyl-tRNA formyltransferase FMT [Lactobacillus helveticus H10]
Length = 315
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 98/315 (31%), Positives = 171/315 (54%), Gaps = 13/315 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M V+FMGT EF+V L+ L+ +++ I +V TQP + G R K + A++ L
Sbjct: 1 MMTSVIFMGTPEFSVPVLEGLIKNNYEIKAVVTQPDKKVG-RKQKITKTPAKIAAEKHDL 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G EE +Q + +AD+ V AYG +P + L++ K+ N H SLLP++RG
Sbjct: 60 PVFQPVKLSGSEEMQQVIDMHADLIVTAAYGQFLPTKFLHSVKIAAVNVHGSLLPKYRGG 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ +++ D ETGI IM+M K +D G + + + I + N L +LS++ ++
Sbjct: 120 APIQYSLINEDAETGITIMEMVKKMDAGDIYSQKAIKIEPDDNAGTLFSKLSIVGRDLLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + ++ PQ + + ++ I+K + R+ +A +N IRAL+P PGA++ +
Sbjct: 180 ETLPSIIDGSVKKIPQDPDKVVFSPNITKEQERIVPTMTATEANNMIRALNPDPGAYMML 239
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQG-AVRIMRLQRAGGRVLDI 294
+R K+ ++++ + + KPG V+ F I+ + G + ++ +Q +G + +DI
Sbjct: 240 EG----KRFKVWKAEVAKDSTDLKPGCVVANKGRFAISFADGTVLNLLEVQPSGKKKMDI 295
Query: 295 GDFLL--GCPVIIGC 307
+FL G G
Sbjct: 296 KNFLNGQGSKFAPGE 310
>gi|227495440|ref|ZP_03925756.1| methionyl-tRNA formyltransferase [Actinomyces coleocanis DSM 15436]
gi|226830987|gb|EEH63370.1| methionyl-tRNA formyltransferase [Actinomyces coleocanis DSM 15436]
Length = 315
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 112/314 (35%), Positives = 173/314 (55%), Gaps = 10/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT + AV TLQALV S H +V+V T+ +P G RG + S V A E L
Sbjct: 1 MKIIFAGTPQVAVPTLQALVDSPHEVVAVITRSAKPKG-RGKTLIPSEVGAWATEHGLNV 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L L EE + ++ D+ VVVAYG +IPQ +L+ K G+ N H S LPRWRGAAP
Sbjct: 60 LEADSLRGEEIQSKVASLNADLGVVVAYGAIIPQHVLDMPKHGWVNLHFSDLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRAI AGD T + I +++ LDTGPV F R+V I +N L L+ A +V
Sbjct: 120 VQRAIEAGDQTTAVNIFQLEAGLDTGPVFFSRQVAIDEQVNAGDLLASLAESGAPDVVSV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + +PQ+E+G+TYA +SK + ++F +SA +HN +RA +P P A+ E+
Sbjct: 180 VDAITAGTAAATPQVEDGVTYAHMLSKADLALDFMKSARVLHNQVRACAPTPAAFTELPD 239
Query: 242 GNKHERIKLLESQLVEG---EGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R+K+L +Q+ +PG+V + + G + ++ + AG ++
Sbjct: 240 ---GKRLKVLRTQVAADCPVALQPGQVHATKKQVWVGTADGVLELLAVAPAGKNQMEAAA 296
Query: 297 FLLGCPVIIGCIVG 310
+ G + I+G
Sbjct: 297 WARGARLEENMILG 310
>gi|54298583|ref|YP_124952.1| hypothetical protein lpp2647 [Legionella pneumophila str. Paris]
gi|73919400|sp|Q5X1U6|FMT_LEGPA RecName: Full=Methionyl-tRNA formyltransferase
gi|53752368|emb|CAH13800.1| hypothetical protein lpp2647 [Legionella pneumophila str. Paris]
Length = 314
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 111/299 (37%), Positives = 165/299 (55%), Gaps = 7/299 (2%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
VVF GT EF + L AL+ S H + +VYTQP RPAG RG K S V + A +P
Sbjct: 6 VVFAGTPEFGLPCLDALIQSRHHLKAVYTQPDRPAG-RGRKLQESPVKEWAINHQIPVYQ 64
Query: 65 PTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P +E LS DV VV+AYGL++P+ +L +LG N HASLLPRWRGA+PIQ
Sbjct: 65 PLNFKNQEAVDELSALKPDVMVVIAYGLILPKAVLEIPRLGCINVHASLLPRWRGASPIQ 124
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
AI+ GD E+G+ IM+MD LDTGP+ P++S+ L +L+ + +++ ++
Sbjct: 125 HAILHGDAESGVTIMQMDVGLDTGPMLCKATCPVTSSDTAGSLHDKLAKMSVKPLLDVLE 184
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
L N+ Q TYA KI+K E R+N+ +SA + IRA +P+P A+ + G
Sbjct: 185 ALASNSAQFELQNNELATYAGKINKEEARINWHQSAVEIDRKIRAFNPWPVAYT--LAGE 242
Query: 244 KHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
RI ++ + PG V+ +A + A+ + ++Q G +V+ + D+L
Sbjct: 243 LMLRIHQAKATDIMSTEMPGMVLNVDKNGMLVATNDNALLVEKIQFPGAKVISVRDWLN 301
>gi|319954833|ref|YP_004166100.1| methionyl-tRNA formyltransferase [Cellulophaga algicola DSM 14237]
gi|319423493|gb|ADV50602.1| methionyl-tRNA formyltransferase [Cellulophaga algicola DSM 14237]
Length = 315
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 100/309 (32%), Positives = 159/309 (51%), Gaps = 6/309 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VFMGT +FAV L LV +S+ IV V T P +PAG RG K SAV K A E +L
Sbjct: 3 KLRIVFMGTPDFAVGILDTLVQNSYDIVGVITAPDKPAG-RGRKLNESAVKKYAVEHNLK 61
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ PT L EE+ L ++ ++P+ + LG +N HASLLP +RGAAP
Sbjct: 62 VMQPTNLKSEEFLDELKSLKPNLQIIVAFRMLPKVVWEIPALGTFNLHASLLPDYRGAAP 121
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G+ +TG+ +D +DTG + +++ I+ N L +L L A +VE
Sbjct: 122 INWAVINGETKTGVTTFFIDNKIDTGEILLQQEIAITPEDNAGSLHDKLMSLGAGVVVET 181
Query: 182 MDKLEQNNLPLSPQIENGITY-AEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +E + + Q I A KI K +N+ + + ++NHIR LSP+P AW +
Sbjct: 182 VKAIEADTISPKKQPTTPIEKVAYKIHKDTCEINWDTTIDKIYNHIRGLSPYPAAWTTLY 241
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
G+ +K+ ++ +++ K ++ IA + G V ++ +Q G R + +
Sbjct: 242 TGDDELFLKIYDAVILKEPHHLKLKTIVFDKKTMKIAVAGGFVALLEIQLPGKRKMKTHE 301
Query: 297 FLLGCPVII 305
L G +
Sbjct: 302 VLNGLKLDE 310
>gi|89070114|ref|ZP_01157444.1| methionyl-tRNA formyltransferase [Oceanicola granulosus HTCC2516]
gi|89044335|gb|EAR50478.1| methionyl-tRNA formyltransferase [Oceanicola granulosus HTCC2516]
Length = 300
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 145/309 (46%), Positives = 184/309 (59%), Gaps = 10/309 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +F+V L ALV++ H I VY+QPPRPAG RG K S V +A+ LP
Sbjct: 1 MRIVFMGTPDFSVPVLDALVAAGHEIACVYSQPPRPAG-RGRKDRPSPVQARAEALGLPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E + + A+VAVVVAYGL++PQ +L+A G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKPAEAQAEVAALGAEVAVVVAYGLILPQPVLDAPARGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIMAGD ETG+ IM+M+ LDTGPV +PI + T L LS L A +VEA
Sbjct: 120 IHRAIMAGDAETGVCIMQMEAGLDTGPVLLREALPIGAEETTGELHDRLSSLGARLIVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D L+ PQ E G+TYA KI K E R+++ R A+ V HIR L+PFPGAW
Sbjct: 180 LDGLDGLEPQ--PQPEAGVTYAAKIDKAEARIDWSRPADEVGRHIRGLAPFPGAWC---- 233
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KLL +++V G G PG V+ P +AC GAV + +QR G R D L G
Sbjct: 234 DAGGERLKLLGARVVGGTGAPGAVLAP-LVVACGTGAVEVPLVQREGRRAGPAADVLRGW 292
Query: 302 PVIIGCIVG 310
+G
Sbjct: 293 SGFP-ERLG 300
>gi|310778476|ref|YP_003966809.1| methionyl-tRNA formyltransferase [Ilyobacter polytropus DSM 2926]
gi|309747799|gb|ADO82461.1| methionyl-tRNA formyltransferase [Ilyobacter polytropus DSM 2926]
Length = 314
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 93/314 (29%), Positives = 157/314 (50%), Gaps = 13/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT +FAV +L L++ H I V+T+ +P RG + + V + A + +P
Sbjct: 1 MRILFMGTPDFAVPSLD-LLNKHHEIAGVFTKIDKP-NMRGKRIKFTPVKEYALKHEIPV 58
Query: 63 LVPTKLGQEEYEQ-FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + +E N D+ VVVAYG ++P+ ++ K G N H+SLLP++RGAAP
Sbjct: 59 HQPKSVKTDETLDLVREINPDLIVVVAYGKILPKELIEIPKYGVINVHSSLLPKYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD E+G++IM + + LD G V K PI+ L L + A ++EA
Sbjct: 119 IHAAIINGDTESGVSIMYIAEELDAGDVILQGKTPINDEDTLETLHDRLMSIGAETLLEA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + + P Q T+ + K + +N+ + ++N +R ++PFP A
Sbjct: 179 VDLIGKEKAPRISQDHEKATFVKPFKKEDCEINWNQENFKIYNFVRGMNPFPSAHT---- 234
Query: 242 GNKHERIKLLESQLV--EGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
N+ + K+ + + + E EG+PGE++ + G+V I + + L
Sbjct: 235 YNQGKIYKIYKVEKISREYEGEPGEIVELLKGRGPVVKTGNGSVIIAEAKPENKKKLTGP 294
Query: 296 DFLLGCPVIIGCIV 309
D + G IG
Sbjct: 295 DLVNGNYFSIGEKF 308
>gi|148654180|ref|YP_001281273.1| methionyl-tRNA formyltransferase [Psychrobacter sp. PRwf-1]
gi|148573264|gb|ABQ95323.1| methionyl-tRNA formyltransferase [Psychrobacter sp. PRwf-1]
Length = 348
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 120/333 (36%), Positives = 175/333 (52%), Gaps = 28/333 (8%)
Query: 4 RVVFMGTSEFAVATLQALVSS----SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
RV+F GT EFA +L+AL+ + IV+VYTQP R AG RG K S V + A E +
Sbjct: 12 RVIFAGTPEFAAISLKALIEQQNELNIEIVAVYTQPDRKAG-RGQKLTASPVKQLALEHN 70
Query: 60 LPALVPTKLGQEE------YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
LP P + E S+ DV VV AYGL++P +L G N HASLL
Sbjct: 71 LPVEQPLTFKKSVEEGLAARETLASYKPDVMVVAAYGLILPMGVLETPTYGCLNIHASLL 130
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RA++AGD +TGI IM+MDK LDTG + + I+ + TA L +++ +
Sbjct: 131 PRWRGAAPIHRALLAGDAQTGITIMQMDKGLDTGDMLYKVAYDIADDETTASLHDKMADM 190
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A A+VE + L + Q ++ TYAEK+SK E +++ +SA ++ IR + P+P
Sbjct: 191 GADAIVEVLKDLPKYQTQAQKQDDSLATYAEKLSKAEGAIDWTQSAAHIERQIRGMHPYP 250
Query: 234 GAWLEMMIGN---KHERIKLLESQLVEGEG----KPGEVI---NPNFTIACS------QG 277
GA+ + + +R+K+L + V +PG VI +AC +G
Sbjct: 251 GAYTFLADPEGNSEPKRVKVLAALPVNASQTTVVEPGTVISVGKNAILVACGKEDADAEG 310
Query: 278 -AVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+R+ +LQ AG + + G + G
Sbjct: 311 TTLRLTKLQFAGSKPVTAEQVCHGSQLDDGDTF 343
>gi|57866754|ref|YP_188365.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis RP62A]
gi|242242498|ref|ZP_04796943.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis
W23144]
gi|71152055|sp|Q5HPX5|FMT_STAEQ RecName: Full=Methionyl-tRNA formyltransferase
gi|57637412|gb|AAW54200.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis RP62A]
gi|242234072|gb|EES36384.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis
W23144]
Length = 310
Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats.
Identities = 107/316 (33%), Positives = 172/316 (54%), Gaps = 14/316 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ +++FMGT +F+ L+ L+ + H +++V TQP RP G R V + A + +
Sbjct: 1 MS-KIIFMGTPDFSTKVLEMLI-AEHEVIAVVTQPDRPVG-RKKVMTPPPVKRVATKHQI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K +E + LS +D+ V A+G ++P+ +LNA KLG N HASLLP++RG
Sbjct: 58 PVYQPEKLKDSQELDVLLSLESDLIVTAAFGQLLPESLLNAPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N + +LS L A +
Sbjct: 118 APIHQAIIDGEEETGITIMYMVKKLDAGNIISQQSIRIEEEDNVGTMHDKLSFLGAELLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + N PQ + T+A I + + R+++ SA+ +HNHIR LSP+P A+ M
Sbjct: 178 KTLPSIIDNTNDSIPQDDALATFASNIRREDERIDWNMSAQAIHNHIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE-GKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLDI 294
N +KL + +V+G+ G PG +I IA A+ + +Q AG + + +
Sbjct: 238 NEKN----LKLFSAFIVKGKKGNPGTIIEATKHELIIATGSDDAIALTEIQPAGKKRMKV 293
Query: 295 GDFLLGCPVI-IGCIV 309
D+L G +G ++
Sbjct: 294 TDYLSGVQESLVGKVL 309
>gi|255318030|ref|ZP_05359275.1| methionyl-tRNA formyltransferase [Acinetobacter radioresistens
SK82]
gi|262380624|ref|ZP_06073778.1| methionyl-tRNA formyltransferase [Acinetobacter radioresistens
SH164]
gi|255304853|gb|EET84025.1| methionyl-tRNA formyltransferase [Acinetobacter radioresistens
SK82]
gi|262298070|gb|EEY85985.1| methionyl-tRNA formyltransferase [Acinetobacter radioresistens
SH164]
Length = 320
Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 113/320 (35%), Positives = 163/320 (50%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT EFA L AL+ + H IV+VYTQP R AG RG K SAV + A LP
Sbjct: 1 MRIIFAGTPEFAAVALNALLKTPHDIVAVYTQPDRKAG-RGQKLTASAVKQLALAHDLPV 59
Query: 63 LVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P +Q + NADV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 FQPLHFKSSTEEGLAAQQQLAALNADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD TG+ IMKM LDTG + PI ++ +A L +L+V A
Sbjct: 120 RGAAPIQRAIATGDQVTGVTIMKMAAGLDTGDMMLKTLCPILASDTSATLHDKLAVQGAE 179
Query: 177 AMVEAMDKLEQNNL---PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ ++ + Q ++ YA K+SK E +++ + A + +IRA +P+P
Sbjct: 180 AICTVLESEQTLQQALADSEVQNDSLAVYAHKLSKAEAEIDWTQDAVALDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGG 289
A+ ++ + S + +PGE++ I C Q + + LQ GG
Sbjct: 240 VAFCQLDDNIALRVWESRLSDQPDTAAQPGEIVAIDKKGVHIKCGQHTVLCLTSLQWPGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ L+ + +G I+
Sbjct: 300 KPLNAVQINQTQKLKVGQIL 319
>gi|242373504|ref|ZP_04819078.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis
M23864:W1]
gi|242348867|gb|EES40469.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis
M23864:W1]
Length = 310
Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 168/308 (54%), Gaps = 13/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ +++FMGT +F+ L+ L+ + H +++V TQP RP G R S V K A E ++
Sbjct: 1 MS-KIIFMGTPDFSTKVLEMLI-AEHEVIAVVTQPDRPVG-RKKLLTPSPVKKVAVEHNI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G E ++ L+ AD+ V A+G ++P+ +L + +LG N HASLLP++RG
Sbjct: 58 PVYQPEKLKGSSELDELLNLEADLIVTAAFGQLLPESLLESPRLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N + +LS L A +
Sbjct: 118 APIHQAIIDGEKETGITIMYMVKKLDAGNIISQKAISIEEEDNVGTMHDKLSFLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ T+A IS+ + R+++ +SA+ +HNHIR LSP+P A+ M
Sbjct: 178 DTLPSIINGTNESIPQDGTQATFASNISREDERIDWNQSAQAIHNHIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLDI 294
N +KL + +++ +G PG +I I A+ + +Q AG + + +
Sbjct: 238 DDKN----LKLYAAHVIKNKKGTPGTIIDTTKKAMIIGTGTDDAIALTEIQLAGKKRMPV 293
Query: 295 GDFLLGCP 302
++L G
Sbjct: 294 ANYLSGVQ 301
>gi|254450497|ref|ZP_05063934.1| methionyl-tRNA formyltransferase [Octadecabacter antarcticus 238]
gi|198264903|gb|EDY89173.1| methionyl-tRNA formyltransferase [Octadecabacter antarcticus 238]
Length = 307
Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 132/306 (43%), Positives = 176/306 (57%), Gaps = 13/306 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M +R+VFMGT +F+ L AL+ + H I +VY+QPPRPAG RG K S V +A+
Sbjct: 1 MKGQDMRIVFMGTPDFSAPILDALLDAGHDICAVYSQPPRPAG-RGKKDRPSPVQTRAEA 59
Query: 58 FSLPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
L P + NAD+AVVVAYGL++PQ +L+A LG N HASLLPRW
Sbjct: 60 LGLIVRHPISLKDTGAQADVAALNADIAVVVAYGLILPQAVLDAPALGCLNIHASLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPI RAIMAGD +TG+ IM+MD LDTG V R+ I + T L LS L A
Sbjct: 120 RGAAPIHRAIMAGDLQTGVCIMQMDAGLDTGAVLLRRECDIDAGETTGELHDRLSNLGAG 179
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
A+ +A+ L PQ + G+TYA KI K E RV++ +S ++ N I LSPFPGAW
Sbjct: 180 AITDAL--AALPTLTPIPQPDTGVTYAAKIDKAEARVDWSKSTPDIVNQINGLSPFPGAW 237
Query: 237 LEMMIGNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ ERIK L++ + + G++ + + + S GAVRI LQRAG +
Sbjct: 238 AQ----ADGERIKFLKASIADTNLPAGQISTADGDLRVGTSDGAVRIHILQRAGKKAAPA 293
Query: 295 GDFLLG 300
+ + G
Sbjct: 294 REVIQG 299
>gi|332976013|gb|EGK12884.1| methionyl-tRNA formyltransferase [Psychrobacter sp. 1501(2011)]
Length = 350
Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 118/335 (35%), Positives = 172/335 (51%), Gaps = 30/335 (8%)
Query: 4 RVVFMGTSEFAVATLQALVSS----SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
RV+F GT EFA +LQAL+ + I++VYTQP R AG RG K S V + A E +
Sbjct: 12 RVIFAGTPEFAAISLQALIEQQQALNIEIIAVYTQPDRKAG-RGQKLTASPVKQLALEHN 70
Query: 60 LPALVPTKLGQEEYEQFLS------FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
LP P + E + + D+ VV AYGL++P +L G N HASLL
Sbjct: 71 LPVEQPLTFKKSVEEGQAARETLANYQPDIMVVAAYGLILPIGVLETPTHGCLNIHASLL 130
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RA++AGD +TGI IM+MDK LDTG + + I+++ TA L +++ L
Sbjct: 131 PRWRGAAPIHRALLAGDEQTGITIMQMDKGLDTGDMLYKVAYNIAADETTASLHDKMAEL 190
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A A+V + L Q ++ YAEK+SK E +++ +SAE + IR + P+P
Sbjct: 191 GAEAIVTVLKDLPWYQAKAEKQDDSLANYAEKLSKSEGEIDWTQSAELIERQIRGMHPYP 250
Query: 234 GAWLEMMI---GNKHERIKLLESQLVEGEG----KPGEVI---NPNFTIACSQG------ 277
GA+ + + +R+K+L + V +PG VI +AC Q
Sbjct: 251 GAYTFLADSEGKGEPKRVKVLAALPVNHSQTTVVEPGTVISVGKNAILVACGQSNTDSNA 310
Query: 278 ---AVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+R+ +LQ AG + + G + G
Sbjct: 311 EGTTLRLTQLQFAGSKPVTAEQVCHGSQLDDGDKF 345
>gi|72161479|ref|YP_289136.1| methionyl-tRNA formyltransferase [Thermobifida fusca YX]
gi|123747226|sp|Q47R04|FMT_THEFY RecName: Full=Methionyl-tRNA formyltransferase
gi|71915211|gb|AAZ55113.1| methionyl-tRNA formyltransferase [Thermobifida fusca YX]
Length = 310
Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 6/311 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT E AV +L AL++S H +V+V T+P AG RG + V S V ++A E +
Sbjct: 1 MRLVFAGTPEVAVPSLDALLASEHEVVAVVTRPDAAAG-RGRRLVASPVARRAAEAGIEV 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + + ++ D VVAYG ++ Q L+ + G+ N H SLLP WRGAAP
Sbjct: 60 LKPARADDPAFLDRLRELAPDCCPVVAYGALLRQEALDIPRYGWVNLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q AI+ GD+ TG ++++ LD GPV PI + L + L+ A +V
Sbjct: 120 VQHAILHGDDITGATTFQIERELDAGPVYGTVTEPIGPRDTSGDLLERLAKSGAELLVRT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + +N L PQ G++YA K++ + RV+F A V IRA +P PGAW
Sbjct: 180 IDGIAKNELVPRPQGSEGVSYAPKLTPDDARVDFTAPALRVDRLIRACTPAPGAWTRF-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
++ +E PG+++ + + + + VR+ +Q G + + D+
Sbjct: 238 RGTRIKLGPVEPLPDAAPLPPGQLVATSRDVLVGTATHPVRLGEVQPQGKKAMPAADWAR 297
Query: 300 GCPVIIGCIVG 310
G + G G
Sbjct: 298 GARIGDGERFG 308
>gi|262370764|ref|ZP_06064088.1| methionyl-tRNA formyltransferase [Acinetobacter johnsonii SH046]
gi|262314126|gb|EEY95169.1| methionyl-tRNA formyltransferase [Acinetobacter johnsonii SH046]
Length = 319
Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats.
Identities = 117/320 (36%), Positives = 163/320 (50%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL+ + H IV+VYTQP R AG RG K SAV + A +P
Sbjct: 1 MKIIFAGTPEFAAVALDALLKTEHEIVAVYTQPDRKAG-RGQKLTASAVKQLALAHDIPV 59
Query: 63 LVPTKLGQEEYEQFLSF------NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + NADV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 YQPLHFKSSTEEGLAAQAELKALNADVMVVAAYGLILPQVVLDTPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD ETG+ IMKM LDTG + + PI + +A L +L+ A
Sbjct: 120 RGAAPIQRAISTGDTETGVTIMKMAAGLDTGDMMYKTYCPIEATDTSASLHDKLAQQGAE 179
Query: 177 AMVE---AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A V+ + L+ Q E YA K+SK E ++++ +A + +IRA +P+P
Sbjct: 180 ATVKVLASESTLQHYLDNREVQDEVLTVYAHKLSKAEAQIDWNSTAVQIDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQ-GAVRIMRLQRAGG 289
A++ + N + SQ G ++ +AC AV + LQ GG
Sbjct: 240 VAFIALDESNNLRVWGSMLSQENAQAQAAGTILAIDKQGVHVACGDEHAVCLSSLQWPGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ L+ L + IG I+
Sbjct: 300 KPLNALQILQTQKLNIGQIL 319
>gi|218778409|ref|YP_002429727.1| methionyl-tRNA formyltransferase [Desulfatibacillum alkenivorans
AK-01]
gi|218759793|gb|ACL02259.1| methionyl-tRNA formyltransferase [Desulfatibacillum alkenivorans
AK-01]
Length = 302
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 104/309 (33%), Positives = 161/309 (52%), Gaps = 13/309 (4%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MG +FAV L+ L + + +V TQP RP G RG K V ++A LP L P
Sbjct: 1 MGAPDFAVLPLKKLHEQGYDVAAVVTQPDRPKG-RGRKLAPPPVKEEAMRLGLPVLQPEN 59
Query: 68 LGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
E+ L+ F ADV VV+AYG ++ + +L K+ N HAS+LP +RG APIQ +I
Sbjct: 60 PKTPEFISELAGFEADVFVVIAYGHILTKEVLALPKIMPINIHASILPAYRGPAPIQWSI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ GD +TG+ M+MD +DTG V + +V I + L +LS A ++ +D L+
Sbjct: 120 INGDAKTGVTAMRMDVGMDTGDVLSVAEVDIEDTDTSETLHDKLSQAGADLLINILDNLD 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
PQ + TYA +SK + + + A + IR ++P+PGA+ + +
Sbjct: 180 SITPT--PQEHDKATYARALSKADGEIRWEEPAFAIERLIRGVTPWPGAFTFL----DGK 233
Query: 247 RIKLLESQLVE--GEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
R++ LE++L + + PG VI+ F +A G + I R+Q A G+ L D+L G
Sbjct: 234 RMRFLEARLWDEPTQAAPGTVISSTGGVFLVATGDGVLNITRVQGASGKPLKAEDYLRGA 293
Query: 302 PVIIGCIVG 310
+ G +G
Sbjct: 294 RIDPGVKLG 302
>gi|329938920|ref|ZP_08288294.1| methionyl-tRNA formyltransferase [Streptomyces griseoaurantiacus
M045]
gi|329301805|gb|EGG45698.1| methionyl-tRNA formyltransferase [Streptomyces griseoaurantiacus
M045]
Length = 310
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 101/314 (32%), Positives = 156/314 (49%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MKLVFAGTPEVAVPALDALIASGRHEVAAVVTRPDAPAG-RGRRLVASPVAERAEEAGIE 59
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + E++ D VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 60 VLKPRRPRDEDFLARLREIAPDCCPVVAYGALLPRVALDVPAHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q ++MAGD TG + +++ LD+GPV I + L L+ + +
Sbjct: 120 PVQHSLMAGDEITGASTFLIEEGLDSGPVYGTVTEEIRPTDTSGDLLTRLAFAGSGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ G+T A KI+ + RV++ A V +R +P PGAW
Sbjct: 180 TMDGIEDGTLEAVPQPAEGVTLAPKITVEDARVDWAAPALRVDRVVRGCTPAPGAWTTF- 238
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+KL++ L + PG V + + AV ++ +Q G + + D
Sbjct: 239 ---RGERLKLIQLALAPERAELAPGAVAVGKNSVHVGTGSHAVELLWVQAQGKKPMRAAD 295
Query: 297 FLLGCPVIIGCIVG 310
+ G + VG
Sbjct: 296 WARGVRITEDERVG 309
>gi|329960184|ref|ZP_08298626.1| methionyl-tRNA formyltransferase [Bacteroides fluxus YIT 12057]
gi|328532857|gb|EGF59634.1| methionyl-tRNA formyltransferase [Bacteroides fluxus YIT 12057]
Length = 323
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 100/318 (31%), Positives = 163/318 (51%), Gaps = 14/318 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A +
Sbjct: 2 MKKEDLRIVYMGTPDFAVEALRCLVEGGYNVVGVITMPDKPAG-RGHKLQFSPVKQYALD 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P KL ++ + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 61 HHLPLLQPEKLKDADFVEALRAWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V VPI+ + + +L +L
Sbjct: 121 GAAPINWAVINGDTETGITTFFLKHEIDTGEVIQQVPVPIAETDDVGIVHDKLMLLGGRL 180
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+VE +D + + PQ + + A KI K R+++ + + +++ +R LSP+P
Sbjct: 181 VVETVDAILDGTVKSVPQEKMAVAGELRPAPKIFKETCRIDWHQPVKRIYDFVRGLSPYP 240
Query: 234 GAWLEMMIGN-KHERIKLLESQLVEGEGK--PGEVINPN---FTIACSQGAVRIMRLQRA 287
AW E++ + + +K+ E++ +E + PG V +A + G + I LQ
Sbjct: 241 AAWTELVQPDGESVVVKVFETEKMEAAHQLAPGTVQTDGKNYIRVAATDGFIAIRSLQLP 300
Query: 288 GGRVLDIGDFLLGCPVII 305
G + L + L G +
Sbjct: 301 GKKRLKTDELLRGFRLTE 318
>gi|237719189|ref|ZP_04549670.1| methionyl-tRNA formyltransferase [Bacteroides sp. 2_2_4]
gi|229451568|gb|EEO57359.1| methionyl-tRNA formyltransferase [Bacteroides sp. 2_2_4]
Length = 323
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 105/320 (32%), Positives = 163/320 (50%), Gaps = 15/320 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A E
Sbjct: 1 MKKEDLRIVYMGTPDFAVEALRQLVEGGYNVVGVITMPDKPAG-RGHKIQYSPVKQYALE 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+LP L P +L E + + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 60 QNLPLLQPERLKDEVFVEALREWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V VPI+ N + +L VL
Sbjct: 120 GAAPINWAVINGDTETGITTFFLKHEIDTGEVIQQVHVPIADTDNVEVVHDKLMVLGGKL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
++E +D + + PQ E + A KI K R+++ + + +++ IR LSP+P
Sbjct: 180 VLETVDAILNGTVKPIPQEEMAVVGELRPAPKIFKETCRIDWNQPVKKIYDFIRGLSPYP 239
Query: 234 GAWLEMMI--GNKHERIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQR 286
AW E++ +K+ ES+ + + G ++ +A G V I+ LQ
Sbjct: 240 AAWSELITSEEGAAVVVKIFESEKIYESHQLATGTIVTDGKKFMKVAVPDGFVSILSLQL 299
Query: 287 AGGRVLDIGDFLLGCPVIIG 306
G + L I + L G + G
Sbjct: 300 PGKKRLKIDELLRGYHLEDG 319
>gi|160883233|ref|ZP_02064236.1| hypothetical protein BACOVA_01202 [Bacteroides ovatus ATCC 8483]
gi|293372314|ref|ZP_06618699.1| methionyl-tRNA formyltransferase [Bacteroides ovatus SD CMC 3f]
gi|156111458|gb|EDO13203.1| hypothetical protein BACOVA_01202 [Bacteroides ovatus ATCC 8483]
gi|292632756|gb|EFF51349.1| methionyl-tRNA formyltransferase [Bacteroides ovatus SD CMC 3f]
Length = 336
Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats.
Identities = 105/320 (32%), Positives = 163/320 (50%), Gaps = 15/320 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A E
Sbjct: 14 MKKEDLRIVYMGTPDFAVEALRQLVEGGYNVVGVITMPDKPAG-RGHKIQYSPVKQYALE 72
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+LP L P +L E + + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 73 QNLPLLQPERLKDEVFVEALREWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 132
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V VPI+ N + +L VL
Sbjct: 133 GAAPINWAVINGDTETGITTFFLKHEIDTGEVIQQVHVPIADTDNVEVVHDKLMVLGGKL 192
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
++E +D + + PQ E + A KI K R+++ + + +++ IR LSP+P
Sbjct: 193 VLETVDAILNGTVKPIPQEEMAVVGELRPAPKIFKETCRIDWNQPVKKIYDFIRGLSPYP 252
Query: 234 GAWLEMMI--GNKHERIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQR 286
AW E++ +K+ ES+ + + G ++ +A G V I+ LQ
Sbjct: 253 AAWSELITSEEGAAVVVKIFESEKIYESHQLATGTIVTDGKKFMKVAVPDGFVSILSLQL 312
Query: 287 AGGRVLDIGDFLLGCPVIIG 306
G + L I + L G + G
Sbjct: 313 PGKKRLKIDELLRGYHLEDG 332
>gi|226306503|ref|YP_002766463.1| methionyl-tRNA formyltransferase [Rhodococcus erythropolis PR4]
gi|259646047|sp|C0ZZD9|FMT_RHOE4 RecName: Full=Methionyl-tRNA formyltransferase
gi|226185620|dbj|BAH33724.1| methionyl-tRNA formyltransferase [Rhodococcus erythropolis PR4]
Length = 307
Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats.
Identities = 106/307 (34%), Positives = 158/307 (51%), Gaps = 9/307 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+RVVF GT E AV +L+ L+ S +H +V+V T+P AG RG K S + A E +P
Sbjct: 1 MRVVFAGTPEPAVPSLRRLIESANHEVVAVVTRPDAVAG-RGRKVTRSPIGLLADEHGIP 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K ++ L+ D A VVAYG ++PQ +L+ K G+ N H SLLP WRGAA
Sbjct: 60 VLTPVKASDPDFAAELARLEPDCAPVVAYGNLLPQNVLDIPKYGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG + +++ +DTGPV + I L L+ A +
Sbjct: 120 PVQAAISAGDEVTGASAFRLEAGMDTGPVYGVMTERIRDTDTAGDLLGRLAENGAALLES 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D LE + PQ +G++YA K++ RV + A V HIRA++P PGAW +
Sbjct: 180 VLDGLEAGEINAVPQSADGVSYAPKVTVDAARVRWELPARTVDRHIRAVTPAPGAWTMIG 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
R+K+ + + GE+ I + AVR+ ++Q G +++ GD+
Sbjct: 240 D----LRVKVGPVTVTDETLAVGEISVRKDGLYIGTATTAVRLGQIQPPGKKLMSAGDWA 295
Query: 299 LGCPVII 305
G +
Sbjct: 296 RGARLDA 302
>gi|53715187|ref|YP_101179.1| methionyl-tRNA formyltransferase [Bacteroides fragilis YCH46]
gi|60683122|ref|YP_213266.1| methionyl-tRNA formyltransferase [Bacteroides fragilis NCTC 9343]
gi|265767015|ref|ZP_06094844.1| methionyl-tRNA formyltransferase [Bacteroides sp. 2_1_16]
gi|73919373|sp|Q5L975|FMT_BACFN RecName: Full=Methionyl-tRNA formyltransferase
gi|73919374|sp|Q64PD6|FMT_BACFR RecName: Full=Methionyl-tRNA formyltransferase
gi|52218052|dbj|BAD50645.1| methionyl-tRNA formyltransferase [Bacteroides fragilis YCH46]
gi|60494556|emb|CAH09355.1| putative methionyl-tRNA formyltransferase [Bacteroides fragilis
NCTC 9343]
gi|263253392|gb|EEZ24868.1| methionyl-tRNA formyltransferase [Bacteroides sp. 2_1_16]
Length = 324
Score = 165 bits (418), Expect = 7e-39, Method: Composition-based stats.
Identities = 105/318 (33%), Positives = 163/318 (51%), Gaps = 14/318 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV LQ LV +++V V T P +PAG RG K S V + A +
Sbjct: 1 MKKEDLRIVYMGTPDFAVEALQCLVEGGYNVVGVITMPDKPAG-RGHKIQYSPVKQYALD 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P KL EE+ Q L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 60 HQLPLLQPEKLKDEEFIQALREWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V ++PI+ N + +L L
Sbjct: 120 GAAPINWAVINGDTETGITTFFLKHEIDTGEVIQQVRIPIADTDNVEIVHDKLMHLGGRL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
++E +D + + + PQ E + A KI K R+++ + + V++ IR LSP+P
Sbjct: 180 VIETVDAILEGKVKSIPQEEMAVAGELRPAPKIFKETCRIDWNQPVKRVYDFIRGLSPYP 239
Query: 234 GAWLEMMIG-NKHERIKLLESQLVE--GEGKPGEVINPN---FTIACSQGAVRIMRLQRA 287
AW E++ + +K+ ES+ + PG ++ +A G V ++ LQ
Sbjct: 240 AAWSELVNPEGEAVVVKIFESEKLPKVHTLAPGSIVTDGKNFLRVAVPDGFVNVLSLQLP 299
Query: 288 GGRVLDIGDFLLGCPVII 305
G + L + L G +
Sbjct: 300 GKKRLKTDELLRGFHLTE 317
>gi|52842800|ref|YP_096599.1| methionyl tRNA formyltransferase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|73919401|sp|Q5ZSC5|FMT_LEGPH RecName: Full=Methionyl-tRNA formyltransferase
gi|52629911|gb|AAU28652.1| methionyl tRNA formyltransferase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 314
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 110/299 (36%), Positives = 165/299 (55%), Gaps = 7/299 (2%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
VVF GT EF + L AL+ S H + +VYTQP RPAG RG K S V + A +P
Sbjct: 6 VVFAGTPEFGLPCLDALIQSRHHLKAVYTQPDRPAG-RGRKLQESPVKEWAINHQIPVYQ 64
Query: 65 PTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P +E LS DV VV+AYGL++P+ +L +LG N HASLLPRWRGA+PIQ
Sbjct: 65 PLNFKNQEAVDELSALKPDVMVVIAYGLILPKAVLEIPRLGCINVHASLLPRWRGASPIQ 124
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
AI+ GD E+G+ IM+MD LDTGP+ P++S+ L +L+ + +++ ++
Sbjct: 125 HAILHGDAESGVTIMQMDVGLDTGPMLCKAACPVTSSDTAGSLHDKLAKMSVKPLLDVLE 184
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
L N+ Q TYA KI+K E R+N+ +SA + IRA +P+P A+ + G
Sbjct: 185 ALASNSAQFELQNNELATYAGKINKEEARINWHQSAVEIDRKIRAFNPWPVAYT--LAGE 242
Query: 244 KHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
RI ++ + PG ++ +A S A+ + ++Q G +++ + D+L
Sbjct: 243 LMLRIHQAKATDIMSTEMPGMILNIDKNGMLVATSDNALLVEKIQFPGAKIISVRDWLN 301
>gi|332185150|ref|ZP_08386899.1| methionyl-tRNA formyltransferase [Sphingomonas sp. S17]
gi|332014874|gb|EGI56930.1| methionyl-tRNA formyltransferase [Sphingomonas sp. S17]
Length = 301
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 138/308 (44%), Positives = 184/308 (59%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT FAV L+AL + H IV+ Y+QPPRP GRRG + V S V + A+ +P
Sbjct: 1 MRIIFMGTPGFAVPVLEALAEAGHDIVASYSQPPRPGGRRGRQLVASPVQQTAERLGIPV 60
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G EE F + ADVAVV AYGL++P+ IL+A +LG N H SLLPRWRGAAP
Sbjct: 61 FTPISLRGPEEQAAFAAHGADVAVVAAYGLILPRAILDAPRLGCLNVHGSLLPRWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+AGD TG+ IM+M+ LDTGPV PI + ++ +
Sbjct: 121 IQRAILAGDAVTGVGIMQMEAGLDTGPVRLEDSTPIGRKTTGELTDELAAMGARLMVRVL 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
D P PQ E GITYA KI K ETR++F + A + +RA +P PGAW E
Sbjct: 181 EDPAR---YPPRPQPEEGITYAAKIDKAETRLDFTKPAIELERQVRAFNPAPGAWFE--- 234
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
++ ERIK+L ++LVE G+PGEV++ TIA ++GA+R + +QRAG V D L G
Sbjct: 235 -HEGERIKILTAELVEASGEPGEVLDDRLTIAGAEGALRPVTVQRAGRGVSSAEDLLRGF 293
Query: 302 PVIIGCIV 309
+ G +
Sbjct: 294 AIPAGTRL 301
>gi|254483297|ref|ZP_05096528.1| methionyl-tRNA formyltransferase [marine gamma proteobacterium
HTCC2148]
gi|214036392|gb|EEB77068.1| methionyl-tRNA formyltransferase [marine gamma proteobacterium
HTCC2148]
Length = 321
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 116/317 (36%), Positives = 162/317 (51%), Gaps = 14/317 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+L+++F GT +F+ L AL+ S H +++VYTQP RPAG RG K S V K A E +P
Sbjct: 3 SLKLIFAGTPDFSAIHLGALIESEHQLIAVYTQPDRPAG-RGKKLQASPVKKLALEQGIP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E + ADV VVVAYGL++P +L A G N HASLLPRWRGAA
Sbjct: 62 VYQPQSLRDPQEQACLAALGADVMVVVAYGLILPAEVLAAPAFGCLNVHASLLPRWRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGDN +G IM+MD LDTG + I A L +L+ A +V+
Sbjct: 122 PIQRAIEAGDNTSGTTIMQMDVGLDTGDMLATANCEIGPETTAAALHDKLASQGAPLLVK 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ LE+ + Q + YA KI KGE +++ ++A + IRA +PFP + +
Sbjct: 182 VLSDLERYQANATAQNDENANYASKILKGEAELDWTQAATTLDRAIRAFNPFPVCFTHLQ 241
Query: 241 IGNKHERIKLLESQL---VEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+RIK+ ++Q G ++ + C +G + I RLQ GG+ L
Sbjct: 242 G----QRIKVWQAQAAGNAPLTEAAGTILRADRNGILVNCGEGQLNIQRLQLPGGKPLTA 297
Query: 295 GDFLLGCP--VIIGCIV 309
L G G
Sbjct: 298 DQVLNGSSELFTPGASF 314
>gi|190576006|ref|YP_001973851.1| methionyl-tRNA formyltransferase [Stenotrophomonas maltophilia
K279a]
gi|229487567|sp|B2FIR3|FMT_STRMK RecName: Full=Methionyl-tRNA formyltransferase
gi|190013928|emb|CAQ47568.1| putative methionyl-tRNA formyltransferase [Stenotrophomonas
maltophilia K279a]
Length = 307
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 120/312 (38%), Positives = 178/312 (57%), Gaps = 14/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFAV++L+A + H +V+VYTQP RPAG RG S V +A +P
Sbjct: 1 MRIVFAGTPEFAVSSLRA-AARHHEVVAVYTQPDRPAG-RGRGLAPSPVKLEAVARGIPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P +Q D+ VVVAYGL++P+ +L G +N HASLLPRWRGAAP
Sbjct: 59 YQPESLKDAAAQQQLRDLQPDLMVVVAYGLILPKAVLAIPTHGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD +TG+ +M+M+ LDTGPV +++PI+S L +L+ L A + +
Sbjct: 119 IQRAIQAGDAKTGVCLMQMEAGLDTGPVLLHQELPIASTDTGGQLHDKLAELGAQVLSDG 178
Query: 182 MDKLEQNNLPL-SPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L P+ PQ E G+TYA K+ K E R+++ + A+ + +RA +P+P A +
Sbjct: 179 LGLLRAGIKPIARPQPEQGVTYAHKLDKAEARLDWAQDADALARTVRAFNPWPIAEATLA 238
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
ER+++ + +E + PG V+ IAC QGA+R+ LQR GG+ +
Sbjct: 239 G----ERVRIHGAVALEADHGQAPGTVLAAGRDGIDIACGQGALRLRVLQREGGKAITAA 294
Query: 296 DFLLGCP-VIIG 306
D+L + +G
Sbjct: 295 DYLNARRDLRVG 306
>gi|253582376|ref|ZP_04859599.1| methionyl-tRNA formyltransferase [Fusobacterium varium ATCC 27725]
gi|251835915|gb|EES64453.1| methionyl-tRNA formyltransferase [Fusobacterium varium ATCC 27725]
Length = 310
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 89/312 (28%), Positives = 159/312 (50%), Gaps = 8/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT EFAV L +S + I+ +T+ +P RG K + V + A E ++P
Sbjct: 1 MRILFMGTPEFAVPCFDVL-NSEYEIIGAFTKVDKP-NMRGKKIKFTPVKEYALENNIPV 58
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L EE ++ + N D+ VVVAYG ++P+ I++ K G N H+SLLP++RGAAP
Sbjct: 59 YQPNSLKTEEIQKTIKDLNPDLIVVVAYGKLLPKEIIDIPKYGVINVHSSLLPKYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G+ E+G+ IM + + LD G + I N L L L A A+++A
Sbjct: 119 INAALIHGEKESGVTIMYIAEELDAGDIISSVSTEIKDEDNFLTLHDRLKELGAEALLKA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ P PQ + T+ + K + ++++ ++ + N +R ++PFP A+
Sbjct: 179 VKLIEKGEAPRIPQNHSEATFVKPFKKEDCKIDWNKTEREIFNFVRGMNPFPSAYTNFND 238
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + E+ +G GEV++ + G+V + ++ ++L D
Sbjct: 239 -KIFKIYGVKENFKSYDDGAVGEVVDIKKGEGVIVKTGDGSVILTEVKPENKKLLRGVDI 297
Query: 298 LLGCPVIIGCIV 309
+ G + G +
Sbjct: 298 INGNVLKKGDKL 309
>gi|257463572|ref|ZP_05627964.1| methionyl-tRNA formyltransferase [Fusobacterium sp. D12]
gi|317061127|ref|ZP_07925612.1| methionyl-tRNA formyltransferase [Fusobacterium sp. D12]
gi|313686803|gb|EFS23638.1| methionyl-tRNA formyltransferase [Fusobacterium sp. D12]
Length = 310
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 97/312 (31%), Positives = 167/312 (53%), Gaps = 8/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT EFAV++L+ L H I++V+T+ +P +RG K + V + A E L
Sbjct: 1 MRILFMGTPEFAVSSLKKL-EEEHEILAVFTKIDKP-NQRGKKIQYTPVKQYALEHHLEV 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + E ++ ++ D+ VVVAYG ++P+ IL K G N H+SLLP++RGAAP
Sbjct: 59 LQPNSIRDIEVIQKIRDYHPDLIVVVAYGKILPKEILGIPKYGVINVHSSLLPKYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I +I+ G+ E+G++IM + + LD GPV V I N A L +L + A+ ++E
Sbjct: 119 IHASIIHGEKESGVSIMYVVEELDAGPVLAQASVEILEEDNCASLHDKLQEMGANLLIET 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ + PQ E T+ + K + ++ + +SA + N +R + PFPGA+
Sbjct: 179 IRNMEKQQIQAIPQDEVKATFVKPFRKEDCKICWNQSAREIFNFVRGMDPFPGAFTIYQG 238
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + ++ E + +GK GE+++ +A G V I + + ++L D
Sbjct: 239 -KQFKIARVEEEKEGRLQGKAGEILSYVKGKGVLVATGSGNVIITKAKPENKKMLSGVDL 297
Query: 298 LLGCPVIIGCIV 309
+ G + G
Sbjct: 298 INGNFLQEGEHF 309
>gi|325983532|ref|YP_004295934.1| methionyl-tRNA formyltransferase [Nitrosomonas sp. AL212]
gi|325533051|gb|ADZ27772.1| methionyl-tRNA formyltransferase [Nitrosomonas sp. AL212]
Length = 313
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 123/312 (39%), Positives = 182/312 (58%), Gaps = 10/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT FA L+ L+ + H IV V TQP RPAG RG+K+V SAV AQ+ L
Sbjct: 1 MKIIFAGTPVFAATALEGLIHAGHQIVMVLTQPDRPAG-RGMKTVASAVKVLAQQQHLAI 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P L E + L DV +V AYGL++PQ +L+ G N HAS+LPRWRGAAP
Sbjct: 60 LQPITLRTPEIQAQLEALRADVMIVAAYGLILPQAVLDIPCQGCLNIHASILPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA++AGD TGI IM+M+ LDTG + ++ I+S+ +T L LS+L A ++VEA
Sbjct: 120 IQRALLAGDGRTGITIMQMNAGLDTGNILLQHEMKIASDDSTQSLHDRLSLLGALSIVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L+Q L Q E YA KI+K E +++ AE + +RA +P PGA+
Sbjct: 180 LVQLQQGKLVSVVQNETEACYANKITKTEAEIDWRLPAEQIDRVVRAFNPTPGAYTSFQG 239
Query: 242 GNKHERIKLLESQLVEGEG-KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
IK+ +++++ GE +PGE++ +AC G +++ LQ+ GGR +++ +F
Sbjct: 240 M----VIKIWQAKIIAGESRQPGEIVAVNREGIVVACGSGLLQVEMLQKPGGRKMNVANF 295
Query: 298 LLGCPVIIGCIV 309
L G G
Sbjct: 296 LTGNNFHPGECF 307
>gi|159901343|ref|YP_001547590.1| methionyl-tRNA formyltransferase [Herpetosiphon aurantiacus ATCC
23779]
gi|226704302|sp|A9B2Z9|FMT_HERA2 RecName: Full=Methionyl-tRNA formyltransferase
gi|159894382|gb|ABX07462.1| methionyl-tRNA formyltransferase [Herpetosiphon aurantiacus ATCC
23779]
Length = 306
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 84/306 (27%), Positives = 148/306 (48%), Gaps = 11/306 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++++GT E AVA L+ L +S H IV V TQP RPAG R V A+ +P
Sbjct: 1 MRILYLGTPEIAVAPLELLHASGHEIVGVVTQPDRPAG-RKNVLTAPPVKLAAERLGIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + +F +V VV AYG ++ +++L LG+ N H S+LP +RG AP
Sbjct: 60 FQPETLKDPAAVARLRAFEPEVGVVAAYGEILRKQVLAIPALGYLNIHPSILPLYRGPAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ AI+AGD+ G++I+K+ +D GP+ +P++++ +L + +
Sbjct: 120 VTGAILAGDDLVGVSIIKLTAKMDAGPILGQMVMPLANDARAGEWTAQLMRQGGELLAQV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + Q ++ +Y + ISK + +N+ A + RA P+PG +++
Sbjct: 180 LPAYAAGQIQAQIQDDSQASYTQMISKNDGLINWNLPALVIERMTRAYDPWPGTAVKL-- 237
Query: 242 GNKHERIKLLESQLV---EGEGKPGEVIN--PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ K+L ++ G +PG + +A GA+ ++ +Q AG R + D
Sbjct: 238 --NDQPFKILRAKAHTSWSGTIQPGTLFEQQGQILVATGSGALELLEVQPAGKRPMAAND 295
Query: 297 FLLGCP 302
+ G
Sbjct: 296 WRRGAK 301
>gi|172057935|ref|YP_001814395.1| methionyl-tRNA formyltransferase [Exiguobacterium sibiricum 255-15]
gi|171990456|gb|ACB61378.1| methionyl-tRNA formyltransferase [Exiguobacterium sibiricum 255-15]
Length = 461
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 104/313 (33%), Positives = 167/313 (53%), Gaps = 12/313 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
RVVFMGT EFA TL+ ++ + +++V V +QP +P G R + + V + A +P L
Sbjct: 152 RVVFMGTPEFAANTLREVIDAGYNVVGVVSQPDKPVG-RKREIKPTPVKEVALAHDIPVL 210
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K+ + +Y+ L D+ + AYG ++P +L A + G N HASLLP++RG API
Sbjct: 211 QPAKIRE-DYQGLLDLKPDLIITAAYGQIVPMAVLEAPQYGAINVHASLLPKYRGGAPIH 269
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+AI+ G+ ETG+ IM M LD G + VPI + +LS A ++E +
Sbjct: 270 QAIIDGETETGVTIMYMVDKLDAGDMLSKIIVPIEERDTVGTMFDKLSAAGAKLLIETLP 329
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+L Q E +T++ IS+ R++F RS E ++N IR ++PFP A+ +
Sbjct: 330 QLIAGTSTPEAQREEDVTFSPNISRERERLDFSRSGEELYNQIRGMNPFPSAYTLLGSD- 388
Query: 244 KHERIKLLESQLVEGEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLDIGDFLL 299
R+K+ ++ V G G GE+I +A A++++ +Q AG + +D F+
Sbjct: 389 ---RLKVYFAEKVPGRGSAGEIIALEADGPVVATGSDTALKLVDVQPAGKKRMDGATFMR 445
Query: 300 GCP--VIIGCIVG 310
G + IG VG
Sbjct: 446 GVGQTLTIGQKVG 458
>gi|315303727|ref|ZP_07874238.1| methionyl-tRNA formyltransferase [Listeria ivanovii FSL F6-596]
gi|313627904|gb|EFR96526.1| methionyl-tRNA formyltransferase [Listeria ivanovii FSL F6-596]
Length = 312
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 98/318 (30%), Positives = 158/318 (49%), Gaps = 15/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT F+V L+ L + + +V+V TQP RP G R V K A E +
Sbjct: 1 MT-KIIFMGTPAFSVPILEQL-AKEYDVVAVVTQPDRPVG-RKRILTPPPVKKIALELGI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E + ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELTELIALQADLLVTAAYGQILPNELLESPKHGSINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS L + ++
Sbjct: 118 APVHYALLDGKKETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFNKLSELGSELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ + +T+A IS+ + ++++ R + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITAIPQDPSKVTFARNISREQEKIDWARPGREIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLES--QLVEGEGKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDI 294
K+ E+ + + G PG +I I G + + +Q AG +D+
Sbjct: 238 EGTPF----KIWEAAHEATKTAGDPGTIITDKTTLKIITGDGTLLVPTVIQPAGKPKMDV 293
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 294 HSFMSGAGRNLSKTTRFG 311
>gi|241760443|ref|ZP_04758537.1| methionyl-tRNA formyltransferase [Neisseria flavescens SK114]
gi|241319112|gb|EER55605.1| methionyl-tRNA formyltransferase [Neisseria flavescens SK114]
Length = 308
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 122/313 (38%), Positives = 175/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ S V + A E SL
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKG-RGMQLTASPVKQAALELSLTV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 AQPEKLRNNAEALQMLKDMGADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L L A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMGLGAEAIVA 179
Query: 181 AMDK-LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + L Q E G+TYA+K+SK E R+++ SA+ + IRA +P P AW+E
Sbjct: 180 DLQRLQAEGCLNAVKQPEEGVTYAQKLSKEEARIDWNESADIIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +GK GEV+ + +AC + A+ I LQ +G + + I
Sbjct: 240 QD----KPMKIWRAEVVAKQGKAGEVLSCTSDGLLVACGENALNITELQPSGSKRMSIQA 295
Query: 297 FLLGCPVIIGCIV 309
F G + +G ++
Sbjct: 296 FAAGRTIEVGTVL 308
>gi|37521400|ref|NP_924777.1| methionyl-tRNA formyltransferase [Gloeobacter violaceus PCC 7421]
gi|39931207|sp|Q7NJK1|FMT_GLOVI RecName: Full=Methionyl-tRNA formyltransferase
gi|35212397|dbj|BAC89772.1| methionyl-tRNA formyltransferase [Gloeobacter violaceus PCC 7421]
Length = 310
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 109/318 (34%), Positives = 172/318 (54%), Gaps = 19/318 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+RVV+ GT+EFAV TL+AL+++ +V+ +QP RP G RG + V AQ +P
Sbjct: 1 MRVVYFGTAEFAVPTLEALLAAREIEVVAAVSQPDRPQG-RGNRLTPPPVKAIAQSRGIP 59
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P +L ++ + AD VV AYG ++PQR+L+ G N H SLLP++RGA
Sbjct: 60 VFQPDRLRKDLEVLAHLEALQADFFVVAAYGQILPQRVLDMPGRGCINVHGSLLPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+Q AI G+ ETGI M M+ LDTGP+ VPI +I L +L+ L A ++
Sbjct: 120 APVQWAIYHGEPETGITTMLMEAGLDTGPMLKKIAVPIDEDITGEQLLAQLAHLGAGLLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + E + + PQ ++ +YA I KG+ V++ +SA + N IRA P+ +
Sbjct: 180 ETL--REFDRITPEPQDDSLSSYAPLIDKGQYLVDWGQSARQIRNQIRAFYPYTHTF--- 234
Query: 240 MIGNKHERIKLLESQLVEG---EGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVL 292
++ R++LL ++L + +P +I + F + GA+ + R+Q AGG+
Sbjct: 235 ---HRGSRLRLLAAELTSTGSEQFQPSAIIHVIKSKGFEVVTGDGALLLTRVQPAGGKEQ 291
Query: 293 DIGDFLLGCPVIIGCIVG 310
D+ GC ++ G +G
Sbjct: 292 PAWDYANGCRLMPGESLG 309
>gi|281492506|ref|YP_003354486.1| methionyl-tRNA formyltransferase [Lactococcus lactis subsp. lactis
KF147]
gi|281376170|gb|ADA65661.1| Methionyl-tRNA formyltransferase [Lactococcus lactis subsp. lactis
KF147]
Length = 319
Score = 165 bits (416), Expect = 9e-39, Method: Composition-based stats.
Identities = 93/323 (28%), Positives = 160/323 (49%), Gaps = 18/323 (5%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
MT +++FMGT +FA L+ L+ S+ + I++V TQP R G R + ++ V + A
Sbjct: 1 MTKTKIIFMGTPQFAATVLKGLIDSNQYEILAVVTQPDRKVG-RKQELRMTPVKELALTV 59
Query: 59 SLPALVPTK---LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+LP L P K + L + +V +V A L N HASLLP+
Sbjct: 60 NLPVLQPEKLSGSVEMTQIMTLLESGEVGIVTAAFGQFLPGKLLDVAQFAVNTHASLLPK 119
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+RG API AIM G+ E G+ IM+M + +D G + PI N + ++L+++
Sbjct: 120 YRGGAPIHYAIMNGEKEAGVTIMEMIRKMDAGDMIAQDSTPILEEDNVGTMFEKLALVGR 179
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
++E++ K L Q E I+++ IS E ++++ +SA + N +R ++PFP A
Sbjct: 180 DLLLESLPKYLSGELKPQVQNEEEISFSPNISPEEEKIDWNKSAREIFNKVRGMNPFPVA 239
Query: 236 WLEMMIGNKHERIKLLESQLVE---GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGG 289
ER K+ E+++ + + GE++ + +A +G + ++ +Q AG
Sbjct: 240 HTT----WNGERFKIYETKVADDSVSNLQAGEIVEKTKKSLKVATGKGLLELLFVQPAGK 295
Query: 290 RVLDIGDFLLGC--PVIIGCIVG 310
+DI FL G + +G G
Sbjct: 296 PKMDIVSFLNGLGQKIQVGDKFG 318
>gi|161507729|ref|YP_001577690.1| methionyl-tRNA formyltransferase FMT [Lactobacillus helveticus DPC
4571]
gi|160348718|gb|ABX27392.1| Methionyl-tRNA formyltransferase FMT [Lactobacillus helveticus DPC
4571]
Length = 315
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 98/311 (31%), Positives = 170/311 (54%), Gaps = 13/311 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+FMGT EF+V L+ L+ +++ I +V TQP + G R K + A++ LP
Sbjct: 5 VIFMGTPEFSVPVLEGLIKNNYEIKAVVTQPDKKVG-RKQKITKTPAKIAAEKHDLPVFQ 63
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G EE +Q + +AD+ V AYG +P + L + K+ N H SLLP++RG APIQ
Sbjct: 64 PVKLSGSEEMQQVIDMHADLIVTAAYGQFLPTKFLKSVKIAAVNVHGSLLPKYRGGAPIQ 123
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETGI IM+M K +D G + + + I + N L +LS++ ++E +
Sbjct: 124 YSLINGDAETGITIMEMVKKMDAGDIYSQKAIKIEPDDNAGTLFSKLSIVGRDLLLETLP 183
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ ++ PQ + + ++ I+K + R+ +A +N IRAL+P PGA++ +
Sbjct: 184 SIIDGSIKKIPQDPDKVVFSPNITKEQERIVPTMTATEANNMIRALNPDPGAYMMLEG-- 241
Query: 244 KHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFL 298
+R K+ ++++ + + KPG V+ F I+ + G + ++ +Q +G + +DI +FL
Sbjct: 242 --KRFKVWKAEVAKDSTDLKPGCVVANKGRFAISFADGTVLNLLEVQPSGKKKMDIKNFL 299
Query: 299 L--GCPVIIGC 307
G G
Sbjct: 300 NGQGSKFAPGE 310
>gi|229493510|ref|ZP_04387295.1| methionyl-tRNA formyltransferase [Rhodococcus erythropolis SK121]
gi|229319471|gb|EEN85307.1| methionyl-tRNA formyltransferase [Rhodococcus erythropolis SK121]
Length = 307
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 106/307 (34%), Positives = 158/307 (51%), Gaps = 9/307 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+RVVF GT E AV +L+ L+ S +H +V+V T+P AG RG K S + A E +P
Sbjct: 1 MRVVFAGTPEPAVPSLRRLIESANHEVVAVVTRPDAVAG-RGRKVTRSPIGLLADEHGIP 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K ++ L+ D A VVAYG ++PQ +L+ K G+ N H SLLP WRGAA
Sbjct: 60 VLTPAKASDPDFAAELARLEPDCAPVVAYGNLLPQNVLDIPKYGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG + +++ +DTGPV + I L L+ A +
Sbjct: 120 PVQAAISAGDEVTGASAFRLEAGMDTGPVYGVMTERIRDTDTAGDLLGRLAENGAALLES 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D LE + PQ +G++YA K++ RV + A V HIRA++P PGAW +
Sbjct: 180 VLDGLEAGEINAVPQSADGVSYAPKVTVDAARVRWELPAPTVDRHIRAVTPAPGAWTMIG 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
R+K+ + + GE+ I + AVR+ ++Q G +++ GD+
Sbjct: 240 D----LRVKVGPITVTDETLAVGEISVRKDGLYIGTATTAVRLGQIQPPGKKLMSAGDWA 295
Query: 299 LGCPVII 305
G +
Sbjct: 296 RGARLDA 302
>gi|313632755|gb|EFR99723.1| methionyl-tRNA formyltransferase [Listeria seeligeri FSL N1-067]
Length = 312
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 155/316 (49%), Gaps = 11/316 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT F+V L+ L + + +V+V TQP RP G R V K A E +
Sbjct: 1 MT-KIIFMGTPAFSVPILEQL-AKEYDVVAVVTQPDRPVG-RKRILTPPPVKKTALELGI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E + ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELTELIALQADLLVTAAYGQILPNELLESPKHGSINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI NT + +LS L + ++
Sbjct: 118 APVHYALLDGKKETGVTIMYMVEKLDAGDMISQRKIPIMDEDNTGTMFDKLSELGSELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ + +T+A IS+ + ++++ R + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITAIPQDPSKVTFARNISREQEKIDWTRPGREIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDIGD 296
+ E+ + G PG +I I G + + +Q AG +D+
Sbjct: 238 EGTPFKIWEAIHEAT--KTAGDPGTIITDKTTLKIITGDGTLLVPTVIQPAGKPKMDVHS 295
Query: 297 FL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 296 FMSGAGRNLSKTIRFG 311
>gi|304313373|ref|YP_003812971.1| Methionyl-tRNA formyltransferase [gamma proteobacterium HdN1]
gi|301799106|emb|CBL47349.1| Methionyl-tRNA formyltransferase [gamma proteobacterium HdN1]
Length = 334
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 107/319 (33%), Positives = 163/319 (51%), Gaps = 11/319 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVS---SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M L++VF GT +FA L+AL++ +S+ I++ YTQP RPAG RG K S V A+
Sbjct: 1 MPLKIVFAGTPDFAATILEALLTQVPASNPIIACYTQPDRPAG-RGRKLSASPVKVLAES 59
Query: 58 FSLPALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+P P + D+ +VVAYGL++PQR+L+ + G N HASLLPRW
Sbjct: 60 HQIPVFQPLNFRDPAAIDALAELQPDLMIVVAYGLILPQRVLDIPRYGCINVHASLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRA+MAGD ETG+ +M+M+ LDTGP+ PI +A L L+ L A
Sbjct: 120 RGAAPIQRALMAGDAETGVTLMQMEAGLDTGPMLSKVHTPILDTDTSASLHDRLATLGAQ 179
Query: 177 AMVEAMD-KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
AMV+ + E + Q ++ YA+K+ K E+ +++ + A + IR L+P+P A
Sbjct: 180 AMVDLLKNFPESGIFAATRQNDHEACYAQKLHKDESLLDWTQPASALCQQIRGLNPWPVA 239
Query: 236 WLEMMIGNKHERIKLLESQLVEGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGRVL 292
++ + + PG ++ ++ +G++ + LQ GG+ L
Sbjct: 240 GSQLGGETVRIWNATAKPETSRAPQAPGTILQADASGIEVSTGEGSLVLTELQLPGGKAL 299
Query: 293 DIGDFLLGCP--VIIGCIV 309
L G
Sbjct: 300 SAAQLLNSRSALFAPGQCF 318
>gi|301021179|ref|ZP_07185215.1| methionyl-tRNA formyltransferase [Escherichia coli MS 196-1]
gi|299881626|gb|EFI89837.1| methionyl-tRNA formyltransferase [Escherichia coli MS 196-1]
Length = 297
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 110/301 (36%), Positives = 167/301 (55%), Gaps = 13/301 (4%)
Query: 17 TLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQF 76
L AL+SS H++V V+TQP RPAG RG K + S V A+E LP P L +E +Q
Sbjct: 1 HLAALLSSGHNVVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQL 59
Query: 77 LSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGI 135
++ DV VVVAYGL++P+ +L +LG N H SLLPRWRGAAPIQR++ AGD ETG+
Sbjct: 60 VAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGV 119
Query: 136 AIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQ 195
IM+MD LDTG + + PI++ + L +L+ L ++ + +L Q
Sbjct: 120 TIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQ 179
Query: 196 IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQL 255
E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+ + +K+ ++ +
Sbjct: 180 DETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIEG----QPVKVWKASV 235
Query: 256 VEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP--VIIGCI 308
++ PG + +A G + ++ LQ AG + + D L + G
Sbjct: 236 IDTATNAAPGTTLEANKQGIQVATGDGILNLLSLQPAGKKAMSAQDLLNSRREWFVPGNR 295
Query: 309 V 309
+
Sbjct: 296 L 296
>gi|299148262|ref|ZP_07041324.1| methionyl-tRNA formyltransferase [Bacteroides sp. 3_1_23]
gi|298513023|gb|EFI36910.1| methionyl-tRNA formyltransferase [Bacteroides sp. 3_1_23]
Length = 323
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 105/320 (32%), Positives = 164/320 (51%), Gaps = 15/320 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A E
Sbjct: 1 MKKEDLRIVYMGTPDFAVEALRQLVEGGYNVVGVITMPDKPAG-RGHKIQYSPVKQYALE 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+LP L P +L E + + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 60 QNLPLLQPERLKDEVFVEALREWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V +VPI+ N + +L VL
Sbjct: 120 GAAPINWAVINGDTETGITTFFLKHEIDTGEVIQQVRVPIADTDNVEVVHDKLMVLGGKL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
++E +D + + PQ E + A KI K R+++ + + +++ IR LSP+P
Sbjct: 180 VLETVDAILNGTVKPIPQEEMAVVGELRPAPKIFKETCRIDWNQPVKKIYDFIRGLSPYP 239
Query: 234 GAWLEMMI--GNKHERIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQR 286
AW E++ +K+ ES+ + + G ++ +A G V I+ LQ
Sbjct: 240 AAWSELITSEEGAAVVVKIFESEKIYESHQLATGTIVTDGKKFMKVAVPDGFVSILSLQL 299
Query: 287 AGGRVLDIGDFLLGCPVIIG 306
G + L I + L G + G
Sbjct: 300 PGKKRLKIDELLRGYHLEDG 319
>gi|86133085|ref|ZP_01051667.1| Methionyl-tRNA formyltransferase [Polaribacter sp. MED152]
gi|85819948|gb|EAQ41095.1| Methionyl-tRNA formyltransferase [Polaribacter sp. MED152]
Length = 314
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 6/306 (1%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M LR+VFMGT +FAV L+ LV +++IV V T +PAG RG K SAV K A +
Sbjct: 1 MKDLRIVFMGTPDFAVTILKHLVDHNYNIVGVITAADKPAG-RGRKLNESAVKKYALSEN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L L PT L E + L+ +V ++P+ + K G +N HASLLP +RGA
Sbjct: 60 LKVLQPTNLKDESFLNELNSLEVDLQIVVAFRMLPKSVWQLPKFGTFNLHASLLPEYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ G+++TG+ +D+ +DTG + ++ I+ + L +L L A +
Sbjct: 120 APIHWAIINGESKTGVTTFFIDEKIDTGEIILQEEINITEDETVGTLHDKLMYLGADLVA 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ ++ + + ++ Q + A K+ TR+++ +S ++N IR L+PFP AW +
Sbjct: 180 KTVNAISEGDIKTKKQPDLEEKQAPKLFPENTRIDWSKSITEIYNQIRGLNPFPAAWTVI 239
Query: 240 MIGNKHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + KL + + V E + G++I +A ++G + I ++ AG + LD
Sbjct: 240 NNNEEQLKTKLYKVRKVTEEHGFEFGKIISSKNELKVAVNKGFIIIDEIKIAGKKKLDSK 299
Query: 296 DFLLGC 301
L G
Sbjct: 300 SLLNGF 305
>gi|269468205|gb|EEZ79898.1| methionyl-tRNA formyltransferase [uncultured SUP05 cluster
bacterium]
Length = 309
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 116/310 (37%), Positives = 174/310 (56%), Gaps = 10/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F G+ +F+V+TL+AL+ + H IV VY QP RP G RG V +KA E L
Sbjct: 1 MKIIFAGSFDFSVSTLEALIDAGHEIVGVYCQPDRPKG-RGRILTACPVKEKALELDLTV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L ++ L ADV +VVAYG ++P +L + K G N HASLLPRWRGAAP
Sbjct: 60 YQPENLRDSSAQKTLKNLGADVMIVVAYGQILPLEVLESPKYGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+AGD +TG+ IM+M++ LDTG V + IS L +L+ L A A+VEA
Sbjct: 120 IQRAILAGDKQTGVGIMQMNEGLDTGDVLLEKICNISDTDTAQTLHNKLATLGADAIVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ + Q ++GITYA+K+SK E +++ +S + IRA +P+P A
Sbjct: 180 LENINNLVSKT--QDKSGITYAKKLSKEEAWIDWTQSVIQISQQIRAFNPYPIAQCNASS 237
Query: 242 GNKHERI-KLLESQLV--EGEGKPGEVIN--PNF-TIACSQGAVRIMRLQRAGGRVLDIG 295
+ ++L + ++ KPGE+I IA GA+ + ++Q AG +V++I
Sbjct: 238 DKFDVKTLRILSASIIGLAYNQKPGEIIEYGKGVCIIATGDGALNLEQVQLAGKKVVNIK 297
Query: 296 DFLLGCPVII 305
DF +
Sbjct: 298 DFTNAYKLTK 307
>gi|296046577|gb|ADG86430.1| Met-tRNA(fMet) formyltransferase [Francisella novicida]
Length = 327
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 113/311 (36%), Positives = 172/311 (55%), Gaps = 12/311 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT EFA L AL++S H+IV+VY P +PAG RG K A A E +
Sbjct: 4 PLNIIFAGTPEFAAQHLAALINSEHNIVAVYCPPDKPAG-RGKKLTACATKLLAIEHDII 62
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P EE +Q +NAD+ VVVAYGL++P+ ILN+ +LG N H S+LP+WRGAA
Sbjct: 63 VEQPINFKNEEDQQQLAKYNADIMVVVAYGLLLPEVILNSPRLGCINVHGSILPKWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD +TG+ IM+MDK LDTG + + I + +A L ++L+ L A+V
Sbjct: 123 PIQRSLEAGDKKTGVTIMQMDKGLDTGDMILSAECEIENTDTSASLYEKLANLGPTALVN 182
Query: 181 AMDKLEQNNL----PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG-A 235
+ + + + Q + TYA+K+ K E +N+ SA+ +H IRA P+P
Sbjct: 183 TLTIMAEPDYQASNHNIAQDDELATYAKKLDKTEAELNWQFSADELHRKIRAYIPWPVAQ 242
Query: 236 WLEMMIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGR 290
+ K R+++ ++ + E G PG +I +A + G++R+ +Q G +
Sbjct: 243 FTFTESEGKQHRLRIWQASVQEYRGNADPGTIIKADKEGIEVATTSGSLRLEVIQLPGKK 302
Query: 291 VLDIGDFLLGC 301
L + D L G
Sbjct: 303 ALAVKDILNGR 313
>gi|71278840|ref|YP_266801.1| methionyl-tRNA formyltransferase [Colwellia psychrerythraea 34H]
gi|123761123|sp|Q48AS9|FMT_COLP3 RecName: Full=Methionyl-tRNA formyltransferase
gi|71144580|gb|AAZ25053.1| methionyl-tRNA formyltransferase [Colwellia psychrerythraea 34H]
Length = 327
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 113/311 (36%), Positives = 172/311 (55%), Gaps = 12/311 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT EFA L AL++S H+IV+VY P +PAG RG K A A E +
Sbjct: 4 PLNIIFAGTPEFAAQHLAALINSEHNIVAVYCPPDKPAG-RGKKLTACATKLLAIEHDII 62
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P EE +Q +NAD+ VVVAYGL++P+ ILN+ +LG N H S+LP+WRGAA
Sbjct: 63 VEQPINFKNEEDQQQLAKYNADIMVVVAYGLLLPEVILNSPRLGCINVHGSILPKWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR++ AGD +TG+ IM+MDK LDTG + + I + +A L ++L+ L A+V
Sbjct: 123 PIQRSLEAGDKKTGVTIMQMDKGLDTGDMILSAECEIENTDTSASLYEKLANLGPTALVN 182
Query: 181 AMDKLEQNNL----PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG-A 235
+ + + + Q + TYA+K+ K E +N+ SA+ +H IRA P+P
Sbjct: 183 TLTIMAEPDYQASNHNIAQDDELATYAKKLDKTEAELNWQFSADELHRKIRAYIPWPVAQ 242
Query: 236 WLEMMIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGR 290
+ K R+++ ++ + E G PG +I +A + G++R+ +Q G +
Sbjct: 243 FTFTESEGKQHRLRIWQASVQEYRGNADPGTIIKADKEGIEVATTSGSLRLEVIQLPGKK 302
Query: 291 VLDIGDFLLGC 301
L + D L G
Sbjct: 303 ALAVKDILNGR 313
>gi|301063979|ref|ZP_07204444.1| methionyl-tRNA formyltransferase [delta proteobacterium NaphS2]
gi|300441890|gb|EFK06190.1| methionyl-tRNA formyltransferase [delta proteobacterium NaphS2]
Length = 315
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 108/319 (33%), Positives = 167/319 (52%), Gaps = 14/319 (4%)
Query: 1 MTLR--VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M + ++FMGT +FA+ +L+AL+ H + +V TQP RP GR G K V V + A++
Sbjct: 1 MPAKPEIIFMGTPDFALPSLKALIDHDHCVQAVVTQPDRPKGRSG-KPVPPPVKEMAEDL 59
Query: 59 SLPALVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
L L P K E + + +S F+ D+ VV+A+G ++ +LN + G N HASLLPR+R
Sbjct: 60 GLNVLQPEKASDEAFCRTISTFSPDLLVVIAFGQILRTTLLNIPRWGGLNIHASLLPRYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPIQRAI+ G+ ETG++ M+M LD GP+ K I + L L+ A
Sbjct: 120 GAAPIQRAIINGEVETGLSAMRMTPGLDAGPILLQEKTAIGVHETAGELHDRLAGKAAPF 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+++ + L +N + PQ TYA KI + R+ + R + IR L P+PGA+
Sbjct: 180 LLKTLRDLSENTIREIPQEHALATYAAKIDRNTGRIFWDRPGNEISALIRGLDPWPGAYT 239
Query: 238 EMMIGNKHERIKLLESQ-LVEGEG--KPGEV---INPNFTIACSQGAVRIMRLQRAGGRV 291
+ + +KL S+ + G+G PG V + + + + LQ AG +
Sbjct: 240 TV----NGKTLKLFSSRTMSSGDGGMVPGRVRGHSGEGLMVETADAVILVSELQLAGRKR 295
Query: 292 LDIGDFLLGCPVIIGCIVG 310
+ DFL G + G + G
Sbjct: 296 VRASDFLRGFALAPGTVFG 314
>gi|261380546|ref|ZP_05985119.1| methionyl-tRNA formyltransferase [Neisseria subflava NJ9703]
gi|284796514|gb|EFC51861.1| methionyl-tRNA formyltransferase [Neisseria subflava NJ9703]
Length = 308
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 122/313 (38%), Positives = 173/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ S V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKG-RGMQLTASPVKQAALELGLTV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 AQPEKLRNNAEALQMLKDTGADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L L A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMGLGAEAIVA 179
Query: 181 AMDK-LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + L Q E G+TYA+K+SK E R+++ SA + IRA +P P AW+E
Sbjct: 180 DLQRLQAEGRLNAVKQPEEGVTYAQKLSKEEARIDWNESAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +GK GEV+ + +AC + A+ I LQ +G + + I
Sbjct: 240 QG----KPMKIWRAEVVAKQGKAGEVLSCTSDGLLVACGENALNITELQPSGSKRMSIQA 295
Query: 297 FLLGCPVIIGCIV 309
F G + IG ++
Sbjct: 296 FAAGRTIEIGTVL 308
>gi|269926059|ref|YP_003322682.1| methionyl-tRNA formyltransferase [Thermobaculum terrenum ATCC
BAA-798]
gi|269789719|gb|ACZ41860.1| methionyl-tRNA formyltransferase [Thermobaculum terrenum ATCC
BAA-798]
Length = 326
Score = 165 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 110/314 (35%), Positives = 172/314 (54%), Gaps = 13/314 (4%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
R++F GTSEFAV LQAL S H +V+VYTQP +PAG RGL+S S + A++ LP
Sbjct: 6 RLLFFGTSEFAVPQLQALTSLGKHDLVAVYTQPDKPAG-RGLRSHPSPIALAAEQLGLPI 64
Query: 63 -LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ D+ ++ AYGL+IP+ L LG+ N H SLLP++RGAAP
Sbjct: 65 EKPKKIRDSSVIASIRDYRPDLIILSAYGLIIPREALQIPPLGWINVHPSLLPKYRGAAP 124
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ AI+AG+ +TG+ +++M + LD GP+ +V I + L + L+ + A +++
Sbjct: 125 IQAAILAGETKTGVTLIRMGEGLDDGPILAQVEVDIKDHETAGELSERLAKIAADLLIQT 184
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+DK Q + Q + TYA KISK +++ + A + +RA +P+P ++
Sbjct: 185 LDKWIQGKITPVEQDHSAATYAPKISKEAACIDWNKPAVLIEREVRAFNPWPVSYTYWED 244
Query: 242 GNKHERIKLLESQ--LVEGEGKPGEVINP----NFTIACSQGAVRIMRLQRAGGRVLDIG 295
+RI + +++ EGKPGEV + C +GA+ + +LQ G +++D
Sbjct: 245 ----KRILIYKAKAIPSSTEGKPGEVTKDVQTKMPIVTCGEGALLLEQLQMQGKKIVDGK 300
Query: 296 DFLLGCPVIIGCIV 309
FL G IIG I+
Sbjct: 301 AFLAGYQKIIGSIL 314
>gi|309810674|ref|ZP_07704482.1| methionyl-tRNA formyltransferase [Dermacoccus sp. Ellin185]
gi|308435305|gb|EFP59129.1| methionyl-tRNA formyltransferase [Dermacoccus sp. Ellin185]
Length = 311
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 111/315 (35%), Positives = 164/315 (52%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVF GT E A+ +L+AL+ S+H +V+V T+P G RG K+ S VH+ A E L
Sbjct: 1 MRVVFAGTPEAALPSLRALLDSAHEVVAVVTRPEARQG-RGRKTSPSPVHELALEAGLEV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L PTK +++ D A +VAYG +IP +L + G+ N H SLLP WRGAAP
Sbjct: 60 LTPTKPSDDDFVARLRELEPDAAPIVAYGGLIPPSVLAIPRHGWINLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A+MAGD+ TG + +++ LDTGPV I + L L+ A +V
Sbjct: 120 VQHALMAGDDVTGASTFLLEEGLDTGPVFGTMTEAIGPTDTSGDLLTRLAEGGASLLVST 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D L ++ PQ +G++ A KI + R++F A V IR SP PG W +
Sbjct: 180 LDALANGDVTPIPQPRDGVSLAPKIHVDDVRLDFSVPAFAVDRRIRGASPAPGGWAML-- 237
Query: 242 GNKHERIKLLESQLVEGEG----KPGEVINPNFTIACS--QGAVRIMRLQRAGGRVLDIG 295
+ ER+KLL S+L + +G PGE+ + G V ++ +Q G +V+
Sbjct: 238 --RGERVKLLRSRLADADGCPPLTPGELHATKKQVFAGALGGVVELLEVQPHGKKVMRAA 295
Query: 296 DFLLGCPVIIGCIVG 310
D+ G + G G
Sbjct: 296 DWARGLRLNEGESFG 310
>gi|326335933|ref|ZP_08202110.1| methionyl-tRNA formyltransferase [Capnocytophaga sp. oral taxon 338
str. F0234]
gi|325691897|gb|EGD33859.1| methionyl-tRNA formyltransferase [Capnocytophaga sp. oral taxon 338
str. F0234]
Length = 314
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 92/306 (30%), Positives = 147/306 (48%), Gaps = 6/306 (1%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M LR+VFMGT +FA L+ +V +V+V T +P+G RG K S+V K A
Sbjct: 1 MKNLRIVFMGTPDFATGILKKIVEVGLQVVAVVTVADKPSG-RGQKLQESSVKKYALSQG 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P L P L +E++ + L VV ++P+ + K G +N HASLLP +RGA
Sbjct: 60 IPVLQPVSLREEKFLEQLRTFKADIQVVVAFRMLPKVVWQIPKKGTFNLHASLLPDYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API I+ G+ +TG+ +D+ +DTG + +++PIS L +L + A ++
Sbjct: 120 APINWVIINGETKTGVTTFLIDEKIDTGAILLQKEIPISERETAGSLHDKLMSVGADLVL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +D + Q I A KI K R+ + S E + IR +SP+P AW +
Sbjct: 180 DTLDLIASGKSNPITQPNENIKEASKIHKDTARIRWNISLEAIDRFIRGMSPYPTAWTVL 239
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
K IK+ + + G + N +A G ++I LQ + ++
Sbjct: 240 HHKGKEYAIKIYTATPIIATHTFTIGSIHLSNRQIRVAVLGGFLQIEELQFPSKKRMNSK 299
Query: 296 DFLLGC 301
+FL G
Sbjct: 300 EFLNGF 305
>gi|315651133|ref|ZP_07904165.1| methionyl-tRNA formyltransferase [Eubacterium saburreum DSM 3986]
gi|315486598|gb|EFU76948.1| methionyl-tRNA formyltransferase [Eubacterium saburreum DSM 3986]
Length = 315
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 110/320 (34%), Positives = 179/320 (55%), Gaps = 20/320 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +F++ L+ L+ + H + V T+ + RG + + V + AQE ++P
Sbjct: 1 MKIVFMGTPDFSLQPLKKLIEAGHYVSLVLTREDKKR-NRG-ELSPTPVKELAQELNIPV 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P+++ E E+ S AD VVVAYG ++P+ IL+ K G N HASLLP +RGAAP
Sbjct: 59 LTPSRMKDEALLERLNSERADFFVVVAYGKILPKEILDMPKFGCINIHASLLPEYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ +I+ G +TGI M MD+ LDTG + ++PIS N L ++L++L A+V+
Sbjct: 119 IQWSIIDGKKKTGITTMLMDEGLDTGDILKQYELPISDNETGGSLFEKLALLGGEAIVDT 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D NN+ Q E+ YA+ ISK ++F +SA + IR ++P+P A+ + M
Sbjct: 179 IDN--FNNITPKKQGESTTGYAKMISKSMGDIDFNKSAIEIERLIRGMNPWPSAYTKYMG 236
Query: 242 GNKHERIKLLESQLVEGEGK-P--------GEVI--NPNFTIACSQGAVRIMRLQRAGGR 290
+ +K+ E+++ E + P G++ N I C+ A+ +M LQ G +
Sbjct: 237 ----KVLKIWEAKVAENISELPNIKLNENYGKIYSFNNRIFIICNSSALEVMSLQLEGKK 292
Query: 291 VLDIGDFLLGCPVIIGCIVG 310
+ DFLLG + G ++G
Sbjct: 293 KMSAKDFLLGREIEQGYVLG 312
>gi|160890846|ref|ZP_02071849.1| hypothetical protein BACUNI_03291 [Bacteroides uniformis ATCC 8492]
gi|156859845|gb|EDO53276.1| hypothetical protein BACUNI_03291 [Bacteroides uniformis ATCC 8492]
Length = 323
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 105/314 (33%), Positives = 162/314 (51%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A E +LP
Sbjct: 7 LRIVYMGTPDFAVEALRCLVEGGYNVVGVITMPDKPAG-RGHKLQFSPVKQYALEHNLPL 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E + + L +V ++P+ + N +LG +N HASLLP++RGAAPI
Sbjct: 66 LQPEKLKDEAFVEALRAWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ GD ETGI + +DTG V +VPI+ N + +L +L +VE +
Sbjct: 126 NWAVINGDTETGITTFFLKHEIDTGEVIQQVRVPIADTDNVGIVHDKLMLLGGRLVVETV 185
Query: 183 DKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
D + + PQ E + A KI K R+++ R + +++ IR LSP+P AW E
Sbjct: 186 DAILAGTVKSIPQEEMAVVGELRPAPKIFKDTCRIDWNRPVKRIYDFIRGLSPYPAAWTE 245
Query: 239 MMIG-NKHERIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVL 292
++ + +K+ E++ + + PG + +A G V I LQ G + L
Sbjct: 246 LVQPGGESVVVKIFETEKIGESHQLTPGTLQTDGKTYIRVAAEDGFVGICSLQLPGKKRL 305
Query: 293 DIGDFLLGCPVIIG 306
+ L G + G
Sbjct: 306 KTDELLRGFRLTEG 319
>gi|332829382|gb|EGK02036.1| methionyl-tRNA formyltransferase [Dysgonomonas gadei ATCC BAA-286]
Length = 334
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 96/324 (29%), Positives = 156/324 (48%), Gaps = 21/324 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT +FAV +L+ LV + +++V V T P +P G RG K SAV + A E LP
Sbjct: 6 LRIVFMGTPDFAVESLRVLVENGYNVVGVITMPDKPGG-RGHKIQYSAVKRYALEHDLPL 64
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E + L +V ++P+ + + ++G +N H SLLP++RGAAPI
Sbjct: 65 LQPEKLKDEVFLNDLKAWNADLQIVVAFRMLPEVVWDMPRMGTFNLHGSLLPQYRGAAPI 124
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ ETG+ + +DTG + +K+ I N + EL + A + +
Sbjct: 125 NWAIINGEKETGVTTFFLTHEIDTGKIILSQKLKIGEEDNAGKIHDELMQIGAQLVRRTV 184
Query: 183 DKLEQNNLPLSPQ-----IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
D + ++ + Q E + A KI K R+++ + ++N IR LSP+P AW
Sbjct: 185 DLILEDKVDAVAQEQLFVDEKELKAAPKIFKETCRIDWNKPVNEIYNLIRGLSPYPAAWT 244
Query: 238 EMMIGNKHER-IKLLESQLVE--GEGKPGEVI------------NPNFTIACSQGAVRIM 282
E+ K + +K+ + + G + + C G ++I
Sbjct: 245 ELHEEGKEVQAVKIYAADKIYKGKSYPIGYIHIDMIENEDIDFEKGYMYVGCVDGYIKIK 304
Query: 283 RLQRAGGRVLDIGDFLLGCPVIIG 306
LQ G + + +FL G +G
Sbjct: 305 ELQWPGRKAMTTDEFLRGYKDKLG 328
>gi|254447491|ref|ZP_05060957.1| methionyl-tRNA formyltransferase [gamma proteobacterium HTCC5015]
gi|198262834|gb|EDY87113.1| methionyl-tRNA formyltransferase [gamma proteobacterium HTCC5015]
Length = 319
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 109/318 (34%), Positives = 159/318 (50%), Gaps = 15/318 (4%)
Query: 4 RVVFMGTSEFAVATLQALVSS----SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
R+V+ GT +FAV L+ L+++ + IV VYTQP RPAG RG + S V + A +
Sbjct: 5 RIVYAGTPDFAVPALEQLIAARDEHNIDIVGVYTQPDRPAG-RGRQLKPSPVKQCALDHQ 63
Query: 60 LPALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP P ++ D+ VV AYGL++P +L ++G N HASLLPRWRG
Sbjct: 64 LPVFQPEHFKDSNAQRQLTELAPDLMVVAAYGLLLPLSVLQTPRMGCVNLHASLLPRWRG 123
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQRAI AGD+ETGI +M+M + LDTG + VPI L +L+ L +
Sbjct: 124 AAPIQRAIEAGDSETGITLMQMAEGLDTGDMLAKATVPIDETTTGGRLHDQLAELGGQLL 183
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ +L L Q + YA K+ K E + + SA + IRA +P+P A
Sbjct: 184 KTHLSELLSGQLNGEAQEDALSNYARKLDKAEANIVWSDSALAIARRIRAFNPWPVASTR 243
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACS-QGA--VRIMRLQRAGGRVL 292
+ R+ L + PG V+ ++C G+ + I +LQR GG+ +
Sbjct: 244 YS--DGALRLWLATAADNGAATTPGTVLQCNKHGIVVSCGEDGSQRLNISQLQRPGGKPM 301
Query: 293 DIGDFLLGCPVIIGCIVG 310
D F + G ++G
Sbjct: 302 DASAFANAVDLS-GQVLG 318
>gi|302877268|ref|YP_003845832.1| methionyl-tRNA formyltransferase [Gallionella capsiferriformans
ES-2]
gi|302580057|gb|ADL54068.1| methionyl-tRNA formyltransferase [Gallionella capsiferriformans
ES-2]
Length = 307
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 118/312 (37%), Positives = 173/312 (55%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT FA + L+AL+ H + +V TQP RP+G RG++ S V A +P
Sbjct: 1 MKIIFAGTPHFAASALEALLK-EHQVAAVLTQPDRPSG-RGMQLTASPVKLLALAHGIPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P ++ + +ADV VV AYGL++P+ +L +LG N HASLLPRWRGAAP
Sbjct: 59 LQPESLKTEQAQSDIKALDADVMVVAAYGLILPKAVLELPRLGCLNIHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+AGD ETGI IM+MD LDTG + R+ I ++ N L +L+ L A ++VEA
Sbjct: 119 IQRAILAGDTETGITIMQMDVGLDTGDILLTRRCTIDAHDNAQTLHDKLAALGAASIVEA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ N L Q + YA K+ KGE +++ + A + +RA +PFP +
Sbjct: 179 L--RADNVLTPVAQDNDAACYAAKLLKGEALIDWTQDAVQIERAVRAYNPFPVCQAKF-- 234
Query: 242 GNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+KL +++ + G PGEV+ T+AC +GA+++ LQR GG+ F
Sbjct: 235 --NDVVLKLWQAEACDAMSGHPGEVLAVDKSGITVACGRGALKLQMLQRPGGKSQPAVQF 292
Query: 298 LLGCPVIIGCIV 309
L PV G
Sbjct: 293 LQAMPVRAGDNF 304
>gi|172035865|ref|YP_001802366.1| methionyl-tRNA formyltransferase [Cyanothece sp. ATCC 51142]
gi|171697319|gb|ACB50300.1| methionyl-tRNA formyltransferase [Cyanothece sp. ATCC 51142]
Length = 338
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 105/332 (31%), Positives = 169/332 (50%), Gaps = 25/332 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++V+F GT +FAV TLQ L+ +++ V TQP + G RG + + SAV + A +L
Sbjct: 8 MKVIFFGTPQFAVPTLQQLLDHPQFNVIGVVTQPDKRRG-RGTQLMPSAVKQVALNHNLS 66
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ +++ Q + ADV VVVAYG ++ IL KLG N H S+LP++RGA
Sbjct: 67 IWQPKRIKKDQDTLLQLKNSQADVFVVVAYGQILSSEILQMPKLGCINVHGSILPQYRGA 126
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ + GD +TGI M MD+ +DTG + IS N + ++L+ A ++
Sbjct: 127 APIQWCLYNGDRQTGITTMLMDEGMDTGDMLLKAYTDISLFDNADEIAEKLANQGADLLI 186
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E ++KLE N + +PQ +N TYA I K + +++ +SA +HN +R P
Sbjct: 187 ETLEKLEANEIEATPQNDNEATYASLIGKDDFIIDWNQSAIAIHNQVRGFYPNCFTSFRD 246
Query: 240 MIGNKH--------------ERIKLLESQL---VEGEGKPGEVINP----NFTIACSQGA 278
E+ K L+ Q+ + EGKPG+V++ I +G
Sbjct: 247 NKLKIMATIPINDNYLQALGEKYKRLKHQINLLDKTEGKPGKVVSIIKNFGPVIQTGEGL 306
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ + +QR+ R D + G + +G ++G
Sbjct: 307 LLLSEIQRSAKRPQSGWDLVNGTRLEVGELLG 338
>gi|218246386|ref|YP_002371757.1| methionyl-tRNA formyltransferase [Cyanothece sp. PCC 8801]
gi|218166864|gb|ACK65601.1| methionyl-tRNA formyltransferase [Cyanothece sp. PCC 8801]
Length = 332
Score = 164 bits (415), Expect = 2e-38, Method: Composition-based stats.
Identities = 108/331 (32%), Positives = 162/331 (48%), Gaps = 25/331 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++F+GT +FA+ TLQ L+ ++ V TQP + G RG + + S + K A E L
Sbjct: 1 MKIIFLGTPQFAIPTLQKLLDHPDFDVIGVVTQPDKRRG-RGNQLIPSPIKKIALEHGLT 59
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L + Q AD VVVAYG ++ IL KLG N H S+LP++RGA
Sbjct: 60 VWQPKNLKKARTTLSQLKEAQADAFVVVAYGQLLSSEILAMPKLGCINVHGSILPQYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ +I GD ETGI M MD+ +DTG + PI N L ++L+ A ++
Sbjct: 120 APIQWSIYHGDKETGITTMLMDEGMDTGAMLIKAYTPIHLLDNAHELAEKLAEQGADLLI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL-- 237
E + KL+ ++ + Q + TYA I K + V++ +SA +HN IRA P A
Sbjct: 180 ETLQKLKLGDITATAQDNDQATYAPLIEKSDYVVDWTKSAIAIHNQIRAFYPNCVATFRN 239
Query: 238 -------------EMMIGNKHERIKLLE--SQLVEGEGKPGEVIN--PNF--TIACSQGA 278
E KL + + L +GK GEV++ NF I +G
Sbjct: 240 QSLKIMATIPLGDTYWEQLPEEFQKLQQQTTMLANIKGKTGEVVSIIKNFGAVIQTGEGL 299
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ + +Q +G R DF+ G + +G I+
Sbjct: 300 LLLKEVQLSGKRQQSGWDFVNGTRLEVGEII 330
>gi|162453281|ref|YP_001615648.1| hypothetical protein sce5005 [Sorangium cellulosum 'So ce 56']
gi|189044556|sp|A9FL08|FMT_SORC5 RecName: Full=Methionyl-tRNA formyltransferase
gi|161163863|emb|CAN95168.1| fmt1 [Sorangium cellulosum 'So ce 56']
Length = 311
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 113/312 (36%), Positives = 175/312 (56%), Gaps = 6/312 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R +F GT AV +L+AL +S +V V QP RPAG RGL+ V KA E +P
Sbjct: 1 MRALFFGTPAIAVPSLEAL-ASIADVVGVVCQPDRPAG-RGLELKAPPVKVKALELGVPV 58
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K+ E+ +++ DVA+V+AYG ++P+ +L A + G N HAS+LPR+RGAAP
Sbjct: 59 LQPEKVRTPEFAAWVAGAGADVALVIAYGRILPKAVLEAPRRGCMNLHASILPRYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ ETGI++M+MD+ +DTGPV +R+ PI + L +L L A + E
Sbjct: 119 ITWAIVGGETETGISLMQMDEGMDTGPVYAVRRTPIGPDTTADELAIDLGALAARVVRED 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + L +PQ T+A + K + R+ + RSA +H+HIR ++ +PGA+ +
Sbjct: 179 LRRAVDGELAPTPQDHEAATHAALLKKEDGRIRWERSARQIHDHIRGMTSWPGAFTTIDG 238
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ES+ +G PG V+ +AC GA++I+R Q G + L D +
Sbjct: 239 KALKVLAAHVESEADQGGAPPGTVVMAGRSVVVVACGAGAIQIVRAQVEGRKPLAAADLV 298
Query: 299 LGCPVIIGCIVG 310
G + G ++G
Sbjct: 299 AGRTLQAGMVLG 310
>gi|261378987|ref|ZP_05983560.1| methionyl-tRNA formyltransferase [Neisseria cinerea ATCC 14685]
gi|269144602|gb|EEZ71020.1| methionyl-tRNA formyltransferase [Neisseria cinerea ATCC 14685]
Length = 308
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 124/313 (39%), Positives = 174/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ + V TQP RP G RG++ S V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEVPLVLTQPDRPKG-RGMQLTASPVKQAALELGLTV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 VQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L L A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQQTDTANEVHDALMGLGAEAIVV 179
Query: 181 AMDK-LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + L Q E G+TYA+K+SK E R+++ SA + IRA +P P AW+E
Sbjct: 180 DLRRLQAEGRLNAVKQPEEGVTYAQKLSKEEARIDWNESAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +GK GEV++ +AC + A+ I LQ AGGR ++I
Sbjct: 240 QG----KPMKIWRAEVVAQQGKAGEVLSCSADGLVVACGENALNITELQPAGGRRMNIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G V G +
Sbjct: 296 FAAGRSVEAGTKL 308
>gi|225075033|ref|ZP_03718232.1| hypothetical protein NEIFLAOT_00032 [Neisseria flavescens
NRL30031/H210]
gi|224953638|gb|EEG34847.1| hypothetical protein NEIFLAOT_00032 [Neisseria flavescens
NRL30031/H210]
Length = 308
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 120/313 (38%), Positives = 173/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ S V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKG-RGMQLTASPVKQAALELGLTV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 AQPEKLRNNAEALQMLRDTGADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI A D ETG+ IM+MD LDTG V + I + L L A A+V
Sbjct: 120 PIQRAIEADDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMGLGAEAIVA 179
Query: 181 AMDK-LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + L Q E G+TYA+K+SK E R+++ SA+ + IRA +P P AW+E
Sbjct: 180 DLQRLQAEGRLNAVKQPEEGVTYAQKLSKEEARIDWNESADIIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +GK GEV+ + +AC + A+ I LQ +G + + I
Sbjct: 240 QG----KPMKIWRAEVVAKQGKAGEVLSCTSDGLLVACGEHALNITELQPSGSKRMSIQA 295
Query: 297 FLLGCPVIIGCIV 309
F G + +G ++
Sbjct: 296 FAAGRTIEVGTVL 308
>gi|70726700|ref|YP_253614.1| methionyl-tRNA formyltransferase [Staphylococcus haemolyticus
JCSC1435]
gi|68447424|dbj|BAE05008.1| methionyl-tRNA formyltransferase [Staphylococcus haemolyticus
JCSC1435]
Length = 312
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 104/317 (32%), Positives = 170/317 (53%), Gaps = 14/317 (4%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M + +V+FMGT +F+ L+ L+ H +++V TQP RP G R V + A+E +
Sbjct: 1 MKMTKVIFMGTPDFSTKVLEMLIE-EHDVIAVVTQPDRPVG-RKRVLTPPPVKRVAEEHN 58
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP P K +E Q L D+ V A+G ++P ++L KLG N HASLLP++RG
Sbjct: 59 LPVFQPEKLAQSDELAQLLQLEPDLIVTAAFGQLLPDQLLQLPKLGAINVHASLLPKYRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API +AI+ G+ +TGI IM M K LD G + + + I N + + +LSVL A+ +
Sbjct: 119 GAPIHQAIIDGEAQTGITIMYMVKKLDAGNIISQKAINIEDNDDVGTMHDKLSVLGANLL 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
E + + Q + T+A IS+ + R+++ +A+++HNHIR LSP+P +
Sbjct: 179 KETLPSIVNGTNDSISQDDTQATFASNISREDERIDWTMNAKDIHNHIRGLSPWPVGYTT 238
Query: 239 MMIGNKHERIKLLESQLV-EGEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLD 293
M N +KL + +V +G+PGE++ +A A+ + +Q AG + +
Sbjct: 239 MDDTN----LKLYAAHIVHNKKGQPGEIVETTKKAIIVATGSDDAIALTDIQLAGKKRML 294
Query: 294 IGDFLLGCPVI-IGCIV 309
++L G +G I+
Sbjct: 295 ASNYLSGVQESLVGKIL 311
>gi|269214257|ref|ZP_06158456.1| methionyl-tRNA formyltransferase [Neisseria lactamica ATCC 23970]
gi|269210258|gb|EEZ76713.1| methionyl-tRNA formyltransferase [Neisseria lactamica ATCC 23970]
Length = 338
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 121/314 (38%), Positives = 173/314 (55%), Gaps = 11/314 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ S V + A E L
Sbjct: 30 AMKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKG-RGMQLTASPVKQAALELGLT 88
Query: 62 ALVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGA
Sbjct: 89 VAQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKHGCLNIHASLLPRWRGA 148
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 149 APIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVV 208
Query: 180 EAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ +L+ Q E G+TYA+K+SK E R+++ SA + IRA +P P AW+E
Sbjct: 209 ADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAAWVE 268
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR +++
Sbjct: 269 YQG----KPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGENALKITELQPAGGRRMNVA 324
Query: 296 DFLLGCPVIIGCIV 309
F G + G +
Sbjct: 325 AFAAGRHIEAGTKL 338
>gi|295086556|emb|CBK68079.1| methionyl-tRNA formyltransferase [Bacteroides xylanisolvens XB1A]
Length = 324
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 107/322 (33%), Positives = 165/322 (51%), Gaps = 15/322 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A E
Sbjct: 2 MKKEDLRIVYMGTPDFAVEALRQLVEGGYNVVGVITMPDKPAG-RGHKIQYSPVKQYALE 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+LP L P KL E + + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 61 QNLPLLQPEKLKDEAFVEALREWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V +VPI+ N + +L +L
Sbjct: 121 GAAPINWAVINGDTETGITTFFLKHEIDTGEVIQQVRVPIADTDNVEVVHDKLMMLGGKL 180
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
++E +D + + Q E + A KI K R+++ + + +++ IR LSP+P
Sbjct: 181 VLETVDAILNGTVKPISQEEMAVVGELRPAPKIFKETCRIDWNQPVKKIYDFIRGLSPYP 240
Query: 234 GAWLEMMIGNKHE--RIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQR 286
AW E++ K E +K+ ES+ V + G ++ +A G V I+ LQ
Sbjct: 241 AAWSELIASEKAESVVVKIFESEKVYESHQLAAGTIVTDGKKFMKVAVPDGFVSILSLQL 300
Query: 287 AGGRVLDIGDFLLGCPVIIGCI 308
G + L + L G + GC
Sbjct: 301 PGKKRLKTDELLRGYHLEDGCK 322
>gi|126733794|ref|ZP_01749541.1| methionyl-tRNA formyltransferase [Roseobacter sp. CCS2]
gi|126716660|gb|EBA13524.1| methionyl-tRNA formyltransferase [Roseobacter sp. CCS2]
Length = 294
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 139/297 (46%), Positives = 183/297 (61%), Gaps = 9/297 (3%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +F+V L ALV + H + +VY QPPRPAG RG K S V +A+ L P
Sbjct: 1 MGTPDFSVPVLDALVDAGHEVAAVYCQPPRPAG-RGKKDRPSPVQLRAEALGLHVRYPVS 59
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
G E FL+ +AD+AVVVAYGL++PQ IL+A K G N HASLLPRWRGAAPI RAI
Sbjct: 60 LKGAAEQAAFLTLDADIAVVVAYGLILPQAILDAPKAGCLNIHASLLPRWRGAAPIHRAI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
MAGD ETG+ IM+M+ LDTGPV I + T L LS + A +V+ +
Sbjct: 120 MAGDAETGVCIMQMEAGLDTGPVLLREATAIGAEETTGQLHDRLSRMGADLIVKVLSHPS 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
PQ + G+TYA KI K E R+++ +SAE+V IR LSPFPGAW ++ E
Sbjct: 180 LYAPV--PQPDQGVTYAAKIDKSEARIDWSKSAEDVSRLIRGLSPFPGAWCDVAG----E 233
Query: 247 RIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPV 303
R+KLL +++V+G G PG V++ FTIAC +GAV + + QRAG + + + L G +
Sbjct: 234 RVKLLSARIVDGAGPPGRVMS-GFTIACGRGAVEVTQAQRAGKKAMSADEVLKGLAL 289
>gi|238898790|ref|YP_002924472.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|259646037|sp|C4K6Y1|FMT_HAMD5 RecName: Full=Methionyl-tRNA formyltransferase
gi|229466550|gb|ACQ68324.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 319
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 116/319 (36%), Positives = 175/319 (54%), Gaps = 16/319 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+L+++F GT +F+ LQ L+S I+ V+TQP RPAG RG K S V A + +P
Sbjct: 4 SLKIIFAGTPDFSACHLQHLLSHRQKILGVFTQPDRPAG-RGKKLAFSPVKILATQHHIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +EE + L +ADV VVVAYGL++PQ +LN +LG N H SLLPRWRGAA
Sbjct: 63 VYQPHSLGLKEEQQSILDLDADVMVVVAYGLLLPQAVLNMPRLGCINVHPSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG + + PI + A LQ +L+ L + ++
Sbjct: 123 PIQRAIWAGDQETGVTIMQMDSGLDTGNMLYKTVYPIQPDDTGASLQAKLAALGSQDLLL 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ K+ + + Q E TYA K++K E R+++ A ++ +RA +P+P ++ +
Sbjct: 183 TLKKMAEGKMHGETQDEQKTTYAHKLTKKEARLDWLLPAAHLERCVRAFNPWPVSYFII- 241
Query: 241 IGNKHERIKLLESQLVE-----GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+ IK+ E+Q + +PG V+ I S+G + + + Q G +++
Sbjct: 242 ---NEQIIKVWEAQAMPDSQQVSHLQPGTVLKADKNGIQILTSEGVLNMTKFQLPGKKII 298
Query: 293 DIGDFLLGCP--VIIGCIV 309
DFL IG +
Sbjct: 299 SAWDFLNSRNEWFQIGKQL 317
>gi|167617460|ref|ZP_02386091.1| methionyl-tRNA formyltransferase [Burkholderia thailandensis Bt4]
Length = 328
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 117/321 (36%), Positives = 171/321 (53%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYALEHGIT 62
Query: 62 ALV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
+ + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKHPAEAAAALDLLHATPHDVMVVAAYGLLLPQEVLDLPRYGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + +V I+ + TA L +L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHDARVAIAPDDTTATLHDKLAA 182
Query: 173 LCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A + ++ L +PQ ++GITYAEKI K E +++ + A + +RA P
Sbjct: 183 AGATLIVDALVELERAGALAATPQPDDGITYAEKIGKHEAALDWRKPATVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ ++ G+ PG +++ IAC +GA+R+ +LQ+ G
Sbjct: 243 FPGGAGTL--DGVTLKLWAADAMPARGDAAPGTIVDAGADGVVIACGEGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ +G
Sbjct: 301 GKRLPAREFLAGAPLAVGQRF 321
>gi|83718636|ref|YP_440688.1| methionyl-tRNA formyltransferase [Burkholderia thailandensis E264]
gi|257140664|ref|ZP_05588926.1| methionyl-tRNA formyltransferase [Burkholderia thailandensis E264]
gi|123767752|sp|Q2T2B1|FMT_BURTA RecName: Full=Methionyl-tRNA formyltransferase
gi|83652461|gb|ABC36524.1| methionyl-tRNA formyltransferase [Burkholderia thailandensis E264]
Length = 328
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 117/321 (36%), Positives = 171/321 (53%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYALEHGIT 62
Query: 62 ALV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
+ + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKHPAEAAAALDLLHATPHDVMVVAAYGLLLPQEVLDLPRYGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + +V I+ + TA L +L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHDARVAIAPDDTTATLHDKLAA 182
Query: 173 LCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A + ++ L +PQ ++GITYAEKI K E +++ + A + +RA P
Sbjct: 183 AGATLIVDALVELERAGALAATPQPDDGITYAEKIGKHEAALDWRKPATVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ ++ G+ PG +++ IAC +GA+R+ +LQ+ G
Sbjct: 243 FPGGAGTL--DGVTLKLWAADAMPARGDAAPGTIVDAGADGVVIACGEGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ +G
Sbjct: 301 GKRLPAREFLAGAPLAVGQRF 321
>gi|17544791|ref|NP_518193.1| methionyl-tRNA formyltransferase [Ralstonia solanacearum GMI1000]
gi|21542042|sp|Q8Y3A8|FMT_RALSO RecName: Full=Methionyl-tRNA formyltransferase
gi|17427080|emb|CAD13600.1| probable methionyl-trna formyltransferase protein [Ralstonia
solanacearum GMI1000]
Length = 327
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 126/325 (38%), Positives = 173/325 (53%), Gaps = 22/325 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL- 60
TLRV F GT EFA L AL + IV+V +QP RPAG RG+ S V + A L
Sbjct: 4 TLRVAFAGTPEFAQIALAALHQAGLPIVAVLSQPDRPAG-RGMHLQASPVKQYAVSHGLG 62
Query: 61 PALV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
P L + + + DV VV AYGL++PQ +L+ + G N H S
Sbjct: 63 PVLQPPSLRRTGKYPQEAAAAIDALSAQQPDVMVVAAYGLILPQEVLDLPRFGCINIHGS 122
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLPRWRGAAPI RAI AGD ETGI +M+MD LDTG + M VPI T L L+
Sbjct: 123 LLPRWRGAAPIHRAIEAGDAETGITLMQMDAGLDTGDMIAMEHVPIGLTDTTGTLHDTLA 182
Query: 172 VLCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
L +VEA+ +L Q+ P +PQ G+TYAEKI+K E +++ R + + + A +
Sbjct: 183 ALGGRMVVEALARLAQDGSLPATPQPAEGVTYAEKIAKEEAALDWSRQSAALLRQVHAFN 242
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLVE---GEGKPGEVIN---PNFTIACSQGAVRIMRL 284
PFPGA E+ + K +++ + + +PG V+ IAC GA+R+ +L
Sbjct: 243 PFPGASAELDGVSI----KFWQAEALPDRPADAQPGAVLAADADGVVIACGAGALRVTQL 298
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
Q+ GG+ L +FL G P+ G
Sbjct: 299 QKPGGKRLPAREFLQGLPIRPGQRF 323
>gi|153807336|ref|ZP_01960004.1| hypothetical protein BACCAC_01614 [Bacteroides caccae ATCC 43185]
gi|149129698|gb|EDM20910.1| hypothetical protein BACCAC_01614 [Bacteroides caccae ATCC 43185]
Length = 322
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 106/317 (33%), Positives = 163/317 (51%), Gaps = 14/317 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A E
Sbjct: 1 MKKEDLRIVYMGTPDFAVEALRQLVEGGYNVVGVITMPDKPAG-RGHKIQYSPVKQYALE 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+LP L P KL E + Q L +V ++P+ + + +LG +N HASLLP++R
Sbjct: 60 QNLPLLQPEKLKDEAFVQALREWKADLQIVVAFRMLPEVVWSMPRLGTFNLHASLLPQYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V +VPI+ N + +L +L
Sbjct: 120 GAAPINWAVINGDTETGITTFFLKHEIDTGEVIQQVRVPIADTDNVEIVHDKLMMLGGKL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+VE +D + + PQ E I A KI K R+++ + + V++ IR LSP+P
Sbjct: 180 VVETVDAILNGVVKPVPQEEMAIVGELRPAPKIFKETCRIDWNQPVKKVYDFIRGLSPYP 239
Query: 234 GAWLEMMIG-NKHERIKLLESQLVEGEGK--PGEVINPN---FTIACSQGAVRIMRLQRA 287
AW E++ + +K+ ES+ V + G ++ +A G V ++ LQ
Sbjct: 240 AAWSELVSPEGEVVVVKIFESEKVSEAHQLSAGTIVTDGKKYIKVAVPDGFVSVLSLQLP 299
Query: 288 GGRVLDIGDFLLGCPVI 304
G + L + L G +
Sbjct: 300 GKKRLKTDELLRGFRLT 316
>gi|55980289|ref|YP_143586.1| methionyl-tRNA formyltransferase [Thermus thermophilus HB8]
gi|73919424|sp|Q5SLH3|FMT_THET8 RecName: Full=Methionyl-tRNA formyltransferase
gi|55771702|dbj|BAD70143.1| methionyl-tRNA formyltransferase [Thermus thermophilus HB8]
Length = 305
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 102/312 (32%), Positives = 156/312 (50%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV F GT +AV L AL H +V V +QP +P G RGL+ S V + A+ LP
Sbjct: 1 MRVAFFGTPLWAVPVLDALRKR-HQVVLVVSQPDKPQG-RGLRPAPSPVARYAEAEGLPL 58
Query: 63 -LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ E +VAVV AYG +IP+ L+ GF N H SLLP++RGAAP
Sbjct: 59 LRPARLREEAFLEALRQAAPEVAVVAAYGKLIPKEALDIPPHGFLNLHPSLLPKYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRA++AG+ ETG++IM++D+ LDTGP+ + + PI + + L L ++E
Sbjct: 119 VQRALLAGERETGVSIMRLDEGLDTGPLYAVWRTPILPDEDAVALGNRLRDKGVELLLE- 177
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
L PQ E R++F SAE ++ RA+ P+PG++
Sbjct: 178 -VLERLPELTPRPQEGEASYAPPLSK-EEGRLDFGESAEALYRRHRAVQPWPGSYFF--- 232
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
++ +R+K L + GEG+PG V + + G + ++ +Q G R + D+
Sbjct: 233 -HRGQRVKALRLRPEPGEGEPGVVARVGPEGVVVGTASGLLLLLEVQPEGRRAMPAADWA 291
Query: 299 LGCPVIIGCIVG 310
G V G +G
Sbjct: 292 RGYGVAPGTRLG 303
>gi|323341654|ref|ZP_08081887.1| methionyl-tRNA formyltransferase [Erysipelothrix rhusiopathiae ATCC
19414]
gi|322464079|gb|EFY09272.1| methionyl-tRNA formyltransferase [Erysipelothrix rhusiopathiae ATCC
19414]
Length = 308
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 99/301 (32%), Positives = 153/301 (50%), Gaps = 7/301 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT+ F+ LQ L+ + +V+V TQP RP G R V + A E +
Sbjct: 1 MRVMFMGTTHFSCVVLQQLLDDGYDVVAVVTQPDRPFG-RKKVLKAPPVKELAIEHQITV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ P K+ + E L+F D+ V AYG ++P+ IL+ K N HASLLP++RG API
Sbjct: 60 IQPIKIKE-SIEDVLAFEPDLVVTCAYGQIVPKAILDYPKFLCLNVHASLLPKFRGGAPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
+I+ G+ ETG+ +M+MD +D+G + R V I ++ +L + E +
Sbjct: 119 HWSIIRGEKETGVTLMRMDVGMDSGDMLSSRSVSIEDQDMMGDVEAKLMEASKVLIHEDL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ L PQ ++ +T A I + + V F R +V+NHIR L P+P + ++
Sbjct: 179 KSYLEGKLSFIPQDKDLVTLAYTIQRDDEFVTFKRPVVDVYNHIRGLIPWPVGYG--VVE 236
Query: 243 NKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ + + E PGEV++ TIAC G V I ++Q AG V DF
Sbjct: 237 GMNVKFHGVMMSNSEHSSDPGEVVSVDENGLTIACIGGTVTITQIQPAGKPVTSAHDFAN 296
Query: 300 G 300
G
Sbjct: 297 G 297
>gi|225010797|ref|ZP_03701265.1| methionyl-tRNA formyltransferase [Flavobacteria bacterium MS024-3C]
gi|225005005|gb|EEG42959.1| methionyl-tRNA formyltransferase [Flavobacteria bacterium MS024-3C]
Length = 317
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 90/308 (29%), Positives = 153/308 (49%), Gaps = 6/308 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT FA L+ALV + I +V T +PAG RG K S V K A L
Sbjct: 6 MPIVFMGTPGFAAYILEALVENGQKIAAVVTVADKPAG-RGKKLHESEVKKTALRHQLTV 64
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L PT L + + L VV ++P+ + G +N HASLLP++RGAAPI
Sbjct: 65 LQPTNLKDPTFIETLKALNAAVFVVVAFRMLPELVWKIPSKGTFNLHASLLPQYRGAAPI 124
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ TG+ +D+ +DTG V + I + L +L VL A+ + + +
Sbjct: 125 NWAIINGEKTTGVTTFFIDEKIDTGAVIDQMSLSIEESDTAGSLHDKLMVLGANLIQKTL 184
Query: 183 DKLEQNNLPLSPQ-IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+E+ + Q ++ + A KI K + R+++ + + + N I+ +SP+P AW +
Sbjct: 185 LGIEKGTVNPKNQTNDSALKEAPKIFKEDCRIDWTKDGKIIENFIKGMSPYPTAWTHLNQ 244
Query: 242 GNKHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
N+ +K+ E+ ++ + + G +I IA G + ++++Q G R + + +
Sbjct: 245 DNETIVLKVFEATFIKTSHDSEIGSIIKSKKELKIAVKDGFIALLKIQLPGKRAMHVFEL 304
Query: 298 LLGCPVII 305
L G +
Sbjct: 305 LNGLQLKE 312
>gi|326329762|ref|ZP_08196083.1| methionyl-tRNA formyltransferase [Nocardioidaceae bacterium
Broad-1]
gi|325952527|gb|EGD44546.1| methionyl-tRNA formyltransferase [Nocardioidaceae bacterium
Broad-1]
Length = 306
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 98/307 (31%), Positives = 162/307 (52%), Gaps = 8/307 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVF GT E AV +L A+ +S H +V V T+P G R + V S V ++A+E +P
Sbjct: 1 MRVVFAGTPEVAVPSLDAIAASRHELVGVVTRPDAAQG-RSKRLVPSPVAQRAEELGVPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + E++ L D VVAYG ++PQ L+ G+ N H SLLP +RGAAP
Sbjct: 60 LKPEHPREPEFQAALKALEPDCCPVVAYGAMLPQSALDIPPHGWVNLHFSLLPAYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRA+ AG+ +G ++ K +D GPV ++ + + L ++L+ A +V
Sbjct: 120 VQRAVWAGEEISGATTFRIVKAMDAGPVFGTMTQALAPDETSGSLFEKLTAGGATLLVST 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D +E +L Q G++YA+KI+ + +V++ ++A + +RA +P PGAW +
Sbjct: 180 LDGIEDGSLEAREQPAEGVSYADKITVEDAQVDWTQNAVAIDRQVRACTPAPGAWTLL-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
ER K+ + + E PGE++ + AVR+ R++ G + + D+
Sbjct: 238 --DGERFKVGPVTMTDDEAAPGELVVRKNEVLVGTGTTAVRLGRVKAFGKKEMPAADWAR 295
Query: 300 GCPVIIG 306
G + G
Sbjct: 296 GVRLESG 302
>gi|157828156|ref|YP_001494398.1| methionyl-tRNA formyltransferase [Rickettsia rickettsii str.
'Sheila Smith']
gi|157800637|gb|ABV75890.1| methionyl-tRNA formyltransferase [Rickettsia rickettsii str.
'Sheila Smith']
Length = 298
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 102/305 (33%), Positives = 163/305 (53%), Gaps = 11/305 (3%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT EFAV L+ L+ + H + +V+TQ P+ G RGL S +H+ A E +P P+
Sbjct: 1 MGTPEFAVPALKKLI-THHEVKAVFTQQPKAKG-RGLNLAKSPIHQLAFEHQIPVYTPST 58
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
E NAD+ VV+AYG ++P+ IL A K G N H S LPR RGAAP+QR I
Sbjct: 59 LRNDEIINLINKVNADIIVVIAYGFIVPKAILEAKKYGCLNIHPSDLPRHRGAAPLQRTI 118
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ GD ++ + IM+MD LDTG + + I L + + L A +++ + ++
Sbjct: 119 IEGDRKSSVCIMRMDTGLDTGDILMKEDFDLEERITLEELHNKCANLGAELLIKTLANID 178
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
Q +G+TYA K++K E ++N+ SA + IR ++P+PG + +
Sbjct: 179 NIVPIT--QPSDGVTYAHKLTKAEGKINWHESAYKIDCKIRGMNPWPGVYFSY----NDK 232
Query: 247 RIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVI 304
IK+LE++ + + G VI+ IAC G +R+ +LQ+ + L I +FL G ++
Sbjct: 233 IIKILEAEYLNADHHFTSGTVISDKLEIACGSGILRVKKLQQESKKALSIEEFLRGTNIL 292
Query: 305 IGCIV 309
++
Sbjct: 293 KDTVL 297
>gi|160947100|ref|ZP_02094267.1| hypothetical protein PEPMIC_01032 [Parvimonas micra ATCC 33270]
gi|158446234|gb|EDP23229.1| hypothetical protein PEPMIC_01032 [Parvimonas micra ATCC 33270]
Length = 307
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 85/315 (26%), Positives = 160/315 (50%), Gaps = 15/315 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M +++FMGT +FAV L+ L + + + V +Q + R K + + V ++A E L
Sbjct: 1 MK-KIIFMGTPDFAVPPLETL-NENFEVSLVVSQKDKLRNR--KKLLPTPVKQRALELGL 56
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P + +E+ +F N D VVVA+G +I +R+++ + N HAS+LP RG+
Sbjct: 57 EVVTPDSVKSDEFFEFVKEINPDFIVVVAFGQIIDKRLIDFMQGKILNIHASILPELRGS 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ +TG++IM +D LDTG V + + I + N L + LS + + +V
Sbjct: 117 APINWAIVNDLKKTGVSIMSIDVGLDTGDVLDIEETEILESDNAETLYERLSEMGSSLIV 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ ++ E Q + +YA I K ++NF ++ N+ N IR +P + E
Sbjct: 177 KTINDFENKYENRVKQ-GDKFSYAPMIKKEMGKLNFNDTSRNIFNKIRGFYNWPSTFCEY 235
Query: 240 MIGNKHERIKLLESQLVEGE-----GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ N K+ +++ + G +V + + G+++++ +Q +G + + +
Sbjct: 236 LGENI----KIHRAEISKENPNEIVGTIFKVSDDAIFVKTLDGSIKLLEIQFSGKKRVLV 291
Query: 295 GDFLLGCPVIIGCIV 309
D+L G + +G I+
Sbjct: 292 KDYLRGNSIKVGEIL 306
>gi|116512830|ref|YP_811737.1| methionyl-tRNA formyltransferase [Lactococcus lactis subsp.
cremoris SK11]
gi|123320172|sp|Q02WP8|FMT_LACLS RecName: Full=Methionyl-tRNA formyltransferase
gi|116108484|gb|ABJ73624.1| methionyl-tRNA formyltransferase [Lactococcus lactis subsp.
cremoris SK11]
Length = 323
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 93/327 (28%), Positives = 160/327 (48%), Gaps = 22/327 (6%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
MT +++FMGT +FA L+ L+ S+ + I++V TQP R G R + ++ V + A
Sbjct: 1 MTKTKIIFMGTPQFAATVLKGLIDSNQYEILAVVTQPDRKVG-RKQELRMTPVKELALTV 59
Query: 59 SLPALVPTK---LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+LP L P K + L + +V +V A L N HASLLP+
Sbjct: 60 NLPVLQPEKLSGSVEMTQIMTLLESGEVGIVTAAFGQFLPGKLLDVARFAVNTHASLLPK 119
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+RG API AIM G+ E G+ IM+M + +D G + PI N + ++L+ +
Sbjct: 120 YRGGAPIHYAIMNGEKEAGVTIMEMIRKMDAGDMIAQNSTPILEEDNVGTMFEKLAFVGR 179
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
++E + K + L Q E+ +T++ IS E ++++ +SA + N +R ++PFP A
Sbjct: 180 DLLLETLPKYLEGQLKAQAQNEDEVTFSPNISPEEEKIDWNKSAREIFNKVRGMNPFPVA 239
Query: 236 WLEMMIGNKHERIKLLESQL-------VEGEGKPGEVI---NPNFTIACSQGAVRIMRLQ 285
ER K+ ES++ + + G+++ + +A G + ++ +Q
Sbjct: 240 HT----LWNGERFKIYESKVADEIVNNSDNPLQAGQIVEKTKKSLKVATGNGILELLTVQ 295
Query: 286 RAGGRVLDIGDFLLGC--PVIIGCIVG 310
AG +DI FL G + +G +G
Sbjct: 296 PAGKPKMDIVSFLNGLGQKMQVGDKLG 322
>gi|315920193|ref|ZP_07916433.1| methionyl-tRNA formyltransferase [Bacteroides sp. D2]
gi|313694068|gb|EFS30903.1| methionyl-tRNA formyltransferase [Bacteroides sp. D2]
Length = 323
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 105/315 (33%), Positives = 164/315 (52%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A E +LP
Sbjct: 6 LRIVYMGTPDFAVEALRQLVEGGYNVVGVITMPDKPAG-RGHKIQYSPVKQYALEQNLPL 64
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P +L E + + L +V ++P+ + N +LG +N HASLLP++RGAAPI
Sbjct: 65 LQPERLKDEAFVEALREWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYRGAAPI 124
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ GD ETGI + +DTG V +VPI+ N + +L VL ++E +
Sbjct: 125 NWAVINGDTETGITTFFLKHEIDTGEVIQQVRVPIADTDNVEVVHDKLMVLGGKLVLETV 184
Query: 183 DKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
D + + PQ E + A KI K R+++ +S + +++ IR LSP+P AW E
Sbjct: 185 DAILNGTVKPIPQEEMAVVGELRPAPKIFKETCRIDWNQSVKKIYDFIRGLSPYPAAWSE 244
Query: 239 MMI--GNKHERIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRV 291
++ +K+ ES+ + + G ++ +A G V I+ LQ G +
Sbjct: 245 LVTSEEGAAVVVKIFESEKIYESHQLATGTIVTDGKKFMKVAVPDGFVSILSLQLPGKKR 304
Query: 292 LDIGDFLLGCPVIIG 306
L I + L G + G
Sbjct: 305 LKIDELLRGYHLEDG 319
>gi|260171881|ref|ZP_05758293.1| methionyl-tRNA formyltransferase [Bacteroides sp. D2]
Length = 336
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 105/315 (33%), Positives = 164/315 (52%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A E +LP
Sbjct: 19 LRIVYMGTPDFAVEALRQLVEGGYNVVGVITMPDKPAG-RGHKIQYSPVKQYALEQNLPL 77
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P +L E + + L +V ++P+ + N +LG +N HASLLP++RGAAPI
Sbjct: 78 LQPERLKDEAFVEALREWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYRGAAPI 137
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ GD ETGI + +DTG V +VPI+ N + +L VL ++E +
Sbjct: 138 NWAVINGDTETGITTFFLKHEIDTGEVIQQVRVPIADTDNVEVVHDKLMVLGGKLVLETV 197
Query: 183 DKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
D + + PQ E + A KI K R+++ +S + +++ IR LSP+P AW E
Sbjct: 198 DAILNGTVKPIPQEEMAVVGELRPAPKIFKETCRIDWNQSVKKIYDFIRGLSPYPAAWSE 257
Query: 239 MMI--GNKHERIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRV 291
++ +K+ ES+ + + G ++ +A G V I+ LQ G +
Sbjct: 258 LVTSEEGAAVVVKIFESEKIYESHQLATGTIVTDGKKFMKVAVPDGFVSILSLQLPGKKR 317
Query: 292 LDIGDFLLGCPVIIG 306
L I + L G + G
Sbjct: 318 LKIDELLRGYHLEDG 332
>gi|167561030|ref|ZP_02353946.1| methionyl-tRNA formyltransferase [Burkholderia oklahomensis EO147]
Length = 327
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYALEHGIA 62
Query: 62 ALV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
+ + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRTGKYPAEAAAALDLLHATPHDVMVVAAYGLLLPQEVLDLPRHGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD +TG+ +M+MD LDTG + +V I+ + TA L +L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAQTGVTLMQMDAGLDTGAMLHDARVAIAPDDTTATLHDKLAA 182
Query: 173 LCAHAMVEAMDKLEQNNLPL-SPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V+ + +LE+ +PQ +G+TYAEKI K E +++ + A + +RA P
Sbjct: 183 AGARLIVDTLAELEREGSLFATPQPADGVTYAEKIGKHEATLDWRKPAAVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ E+ G+G PG +++ IAC +GA+R+ +LQ+ G
Sbjct: 243 FPGGAGTL--DGTTLKLWAAEAVAAPGDGAPGTIVDAGPDGVVIACGEGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ G
Sbjct: 301 GKRLPAREFLAGAPLAAGQCF 321
>gi|297155760|gb|ADI05472.1| methionyl-tRNA formyltransferase [Streptomyces bingchenggensis
BCW-1]
Length = 310
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 103/314 (32%), Positives = 156/314 (49%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+ L AL++S H +V+V T+P PAG RG + V S V ++A E +
Sbjct: 1 MRLVFAGTPEVALPALDALIASDRHEVVAVVTRPDAPAG-RGRRLVASPVAERAAEAGIE 59
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K E+ D VVAYG ++P+ L G+ N H SLLP WRGAA
Sbjct: 60 VLKPAKPRDPEFLDRLREIAPDCCPVVAYGALLPKAALEIPAHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A++AGD TG + +++ LD+GPV + + + L LS+ A +
Sbjct: 120 PVQHAVLAGDEVTGASTFLIEEGLDSGPVYGVVTEDVRPTDTSGDLLTRLSLAGAGLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E +L PQ G++ A KI+ + +++ A V +RA +P PGAW
Sbjct: 180 TMDGIEDGSLRAEPQPAEGVSLAPKINVEDAEIDWAAPALRVDRLVRACAPAPGAWTTF- 238
Query: 241 IGNKHERIKLLESQLVE--GEGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ER+K+ + LV + PGE V AV + ++ G R + D
Sbjct: 239 ---RGERLKVNAAALVTDRTDLAPGELAVTKKAVYAGTGSHAVELTWVRPQGKRPMPGAD 295
Query: 297 FLLGCPVIIGCIVG 310
+ G + G +G
Sbjct: 296 WARGVRIAQGERLG 309
>gi|270290372|ref|ZP_06196597.1| methionyl-tRNA formyltransferase [Pediococcus acidilactici 7_4]
gi|270281153|gb|EFA26986.1| methionyl-tRNA formyltransferase [Pediococcus acidilactici 7_4]
Length = 321
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 167/316 (52%), Gaps = 18/316 (5%)
Query: 3 LR-VVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
++ ++FMGT +F+ LQ+L+ ++++ V TQP R G R S V + A + +
Sbjct: 1 MKSIIFMGTPQFSAPILQSLIDHPDYNVIGVVTQPDRRVG-RKHVLTPSPVKQVATKHDI 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K G E E+ ++ NAD+ V A+G +P +++N+ K+ N HASLLP++RG
Sbjct: 60 KVYQPEKLSGSPEMEELINLNADLIVTAAFGQFLPMKLINSVKIAAINVHASLLPKYRGG 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ AIM GD ETG+ I+ M K +D G + K+PI+ + + ++LS+L ++
Sbjct: 120 APVHYAIMNGDAETGVTIIYMVKKMDAGDMLAQAKMPITDQDDVGSMFEKLSILGRDTLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + Q E ++++ I+ + V+ A V +R L PFP A++ M
Sbjct: 180 ETLPKLINGEITPVAQDEEQVSFSPNIAPEQEAVDINLPARLVDAKVRGLRPFPVAYVIM 239
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQ-GAVRIMRLQRAGGRVLD 293
+R KL ++ +V+ + PG+V+ +A G + I+ LQ AG + +
Sbjct: 240 EG----QRTKLWKTTVVDQSTDLAPGQVVEKTKHELLVATGDHGVISILELQPAGKQKMS 295
Query: 294 IGDFLLGCPVIIGCIV 309
I D+L G +G +
Sbjct: 296 ITDYLNG----VGDNL 307
>gi|125624918|ref|YP_001033401.1| methionyl-tRNA formyltransferase [Lactococcus lactis subsp.
cremoris MG1363]
gi|166214904|sp|A2RN27|FMT_LACLM RecName: Full=Methionyl-tRNA formyltransferase
gi|124493726|emb|CAL98714.1| methionyl tRNA formyltransferase [Lactococcus lactis subsp.
cremoris MG1363]
gi|300071718|gb|ADJ61118.1| methionyl-tRNA formyltransferase [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 323
Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats.
Identities = 93/327 (28%), Positives = 160/327 (48%), Gaps = 22/327 (6%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
MT +++FMGT +FA L+ L+ S+ + I++V TQP R G R + ++ V + A
Sbjct: 1 MTKTKIIFMGTPQFAATVLKGLIDSNKYEILAVVTQPDRKVG-RKQELRMTPVKELALTV 59
Query: 59 SLPALVPTK---LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+LP L P K + L + +V +V A L N HASLLP+
Sbjct: 60 NLPVLQPEKLSGSVEMTQIMTLLESGEVGIVTAAFGQFLPGKLLVVARFAVNTHASLLPK 119
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+RG API AIM G+ E G+ IM+M + +D G + PI N + ++L+ +
Sbjct: 120 YRGGAPIHYAIMNGEKEAGVTIMEMIRKMDAGDMIAQNSTPILEEDNVGTMFEKLAFVGR 179
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
++E + K + L Q E+ +T++ IS E ++++ +SA + N +R ++PFP A
Sbjct: 180 DLLLETLPKYLEGQLKAQAQNEDEVTFSPNISPEEEKIDWNKSAREIFNKVRGMNPFPVA 239
Query: 236 WLEMMIGNKHERIKLLESQL-------VEGEGKPGEVI---NPNFTIACSQGAVRIMRLQ 285
ER K+ ES++ + + G+++ + +A G + ++ +Q
Sbjct: 240 HT----LWNGERFKIYESKVADEIVNNSDNPLQAGQIVEKTKKSLKVATGNGILELLTVQ 295
Query: 286 RAGGRVLDIGDFLLGC--PVIIGCIVG 310
AG +DI FL G + +G +G
Sbjct: 296 PAGKPKMDIVSFLNGLGQKMQVGDKLG 322
>gi|303237218|ref|ZP_07323788.1| methionyl-tRNA formyltransferase [Prevotella disiens FB035-09AN]
gi|302482605|gb|EFL45630.1| methionyl-tRNA formyltransferase [Prevotella disiens FB035-09AN]
Length = 340
Score = 163 bits (413), Expect = 3e-38, Method: Composition-based stats.
Identities = 99/325 (30%), Positives = 160/325 (49%), Gaps = 25/325 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT EFAV +L+ALV +++V+V TQP +P GR AV A+ LP
Sbjct: 6 IRIVFMGTPEFAVESLKALVEGGYNVVAVVTQPDKPVGRHQDTLQAPAVKVYAESVGLPV 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P K+ ++ L VV ++PQ + + + G +N HA+LLP++RGAAPI
Sbjct: 66 LQPIKMKDADFLAQLKSYHADLQVVVAFRMLPQEVWDMPRFGTFNVHAALLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ ETG+ +DK++DTG + + PI + N + L L A E +
Sbjct: 126 NWAVINGETETGVTTFFLDKNIDTGRIIQRKHFPIPDHANAEYVYDGLMKLGAVLATETI 185
Query: 183 DKLEQN---------------NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR 227
D L QN + + A KI K ++N+ + +++++N +R
Sbjct: 186 DFLAQNLLFDMSKEELTTAIESFTEIQNDSCELHDAPKIFKETCKINWQQPSKDIYNFVR 245
Query: 228 ALSPFPGAWLEMMIGNKHER------IKLLESQLVE--GEGKPGEVI--NPNFTIACSQG 277
LSP+PGAW M+ N + +K+ E+ + +G+ G I + I +
Sbjct: 246 GLSPYPGAWSNMVAINNEMKEKGKMVMKVFETAKTDMPSKGESGTFIVEGKSLYINTADR 305
Query: 278 AVRIMRLQRAGGRVLDIGDFLLGCP 302
+ I LQ +G + +D FL G
Sbjct: 306 LLEIKELQLSGKKRIDSRSFLNGFQ 330
>gi|309378545|emb|CBX22817.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 338
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 121/314 (38%), Positives = 173/314 (55%), Gaps = 11/314 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 30 AMKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLR 88
Query: 62 ALVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P KL + ADV VV AYGL++PQ +L+A K G N HASLLPRWRGA
Sbjct: 89 VAQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDAPKHGCLNIHASLLPRWRGA 148
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 149 APIQRAIEAGDAETGVCIMQMDAGLDTGDVVSEHRYAIRPTDTANEVHDALMEIGAAAVV 208
Query: 180 EAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ +L+ Q E G+TYA+K+SK E R+++ SA + IRA +P P AW+E
Sbjct: 209 ADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAAWVE 268
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ +++V +G GEV++ +AC + A++I LQ AGG+ ++I
Sbjct: 269 YQG----KPMKIRRAEVVAQQGAAGEVLSYSADGLVVACGENALKITELQPAGGKRMNIA 324
Query: 296 DFLLGCPVIIGCIV 309
F G + G +
Sbjct: 325 AFAAGRHIEAGTKL 338
>gi|237734417|ref|ZP_04564898.1| methionyl-tRNA formyltransferase [Mollicutes bacterium D7]
gi|229382647|gb|EEO32738.1| methionyl-tRNA formyltransferase [Coprobacillus sp. D7]
Length = 317
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 92/307 (29%), Positives = 158/307 (51%), Gaps = 9/307 (2%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+++FMGT+ F+ L+ L+ +++++V+V TQP R G R + V + A +P
Sbjct: 5 KIIFMGTASFSKQVLEKLLENNYNVVAVVTQPDRFVG-RKKVLTMPEVKEVALASGIPVY 63
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K+ +E E + D+ + AYG ++P+ +LNA K+G N HASLLP++RG AP+
Sbjct: 64 QPLKIKEEYQEII-ALEPDLIITAAYGQIVPEAVLNAPKIGCINVHASLLPKYRGGAPVH 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
AIM G+ TG+ IM M K +D G + +VPI + T L + LS+ A ++E +
Sbjct: 123 YAIMEGEEVTGVTIMYMVKKMDAGNIISQVEVPIGAEETTGELYERLSIAGAELLLETLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG- 242
+ Q E+ +TY+ IS + +++F +SA V+N +R ++P+PGA+
Sbjct: 183 SVLAGKNESIAQDESLVTYSPTISHEQEKIDFSKSALRVYNQVRGMNPWPGAYTTYQGKV 242
Query: 243 ------NKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
H L+ + G ++ + +G I LQ AG + + + D
Sbjct: 243 VKIWAGKIHVCENALKHHAHQENGTIVKIFKDAIGVKTGEGIYLITELQLAGKKRMLVKD 302
Query: 297 FLLGCPV 303
+L G +
Sbjct: 303 YLNGNNI 309
>gi|167755670|ref|ZP_02427797.1| hypothetical protein CLORAM_01185 [Clostridium ramosum DSM 1402]
gi|167704609|gb|EDS19188.1| hypothetical protein CLORAM_01185 [Clostridium ramosum DSM 1402]
Length = 317
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 92/307 (29%), Positives = 158/307 (51%), Gaps = 9/307 (2%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+++FMGT+ F+ L+ L+ +++++V+V TQP R G R + V + A +P
Sbjct: 5 KIIFMGTASFSKQVLEKLLENNYNVVAVVTQPDRFVG-RKKVLTMPEVKEVALASGIPVY 63
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K+ +E E + D+ + AYG ++P+ +LNA K+G N HASLLP++RG AP+
Sbjct: 64 QPLKIKEEYQEII-ALEPDLIITAAYGQIVPEAVLNAPKIGCINVHASLLPKYRGGAPVH 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
AIM G+ TG+ IM M K +D G + +VPI + T L + LS+ A ++E +
Sbjct: 123 YAIMEGEEVTGVTIMYMVKKMDAGNIISQVEVPIGAEETTGELYERLSIAGAELLLETLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG- 242
+ Q E+ +TY+ IS + +++F +SA V+N +R ++P+PGA+
Sbjct: 183 SVLAGTNESIAQDESLVTYSPTISHEQEKIDFSKSALRVYNQVRGMNPWPGAYTTYQGKV 242
Query: 243 ------NKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
H L+ + G ++ + +G I LQ AG + + + D
Sbjct: 243 VKIWAGKIHVCENALKHHAHQENGTIVKIFKDAIGVKTGEGIYLITELQLAGKKRMLVKD 302
Query: 297 FLLGCPV 303
+L G +
Sbjct: 303 YLNGNNI 309
>gi|300781121|ref|ZP_07090975.1| methionyl-tRNA formyltransferase [Corynebacterium genitalium ATCC
33030]
gi|300532828|gb|EFK53889.1| methionyl-tRNA formyltransferase [Corynebacterium genitalium ATCC
33030]
Length = 315
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 94/304 (30%), Positives = 144/304 (47%), Gaps = 10/304 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E AV LQ L++S H +V+V T+P G RG S V A E +
Sbjct: 1 MRLIFAGTPEPAVVALQKLIASDHEVVAVLTRPDAKKG-RGRTLHPSPVKALAMEHGIEV 59
Query: 63 LVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + +E + + D VVAYG +IP+ L + G+ N H SLLP+WRGAA
Sbjct: 60 LTPETLRGNEEVHARLTELAPDAIPVVAYGNLIPKDFLAIPRHGWINLHFSLLPQWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q I+ GD G ++D+ LDTG + ++ I + L L+ A +V
Sbjct: 120 PVQAGILHGDEFGGATTFRIDQGLDTGDIIGQQREEIRATDTADDLLTRLAYDGADLLVR 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD LE + Q TYA KI+K + R+++ SA + +RA +P PGAW +
Sbjct: 180 TMDDLESGAATFTLQEGE-ATYAPKITKDDARIDWQSSAAEIDRAVRAHTPGPGAWTTLD 238
Query: 241 IGNKHERIKLLESQLVEGEGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
R K+ + PG + + G+V + +Q G +++ D+
Sbjct: 239 DA----RYKVGPITPSHEQLAPGHVAISKDEVRVGTGDGSVVLGMIQPPGKKMMRATDWA 294
Query: 299 LGCP 302
G
Sbjct: 295 RGLH 298
>gi|46446038|ref|YP_007403.1| methionyl-tRNA formyltransferase [Candidatus Protochlamydia
amoebophila UWE25]
gi|73919411|sp|Q6ME71|FMT_PARUW RecName: Full=Methionyl-tRNA formyltransferase
gi|46399679|emb|CAF23128.1| probable methionyl-tRNA formyltransferase [Candidatus
Protochlamydia amoebophila UWE25]
Length = 318
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 93/304 (30%), Positives = 165/304 (54%), Gaps = 6/304 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++V+F GT FA L+ L+ + +V+V ++P RP G R V + V AQ + LP
Sbjct: 5 KMKVIFFGTPLFAAQVLEFLLQNQVEVVAVISKPDRPKG-RSSIPVPTPVKLIAQSYHLP 63
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + ++ L D+ VVVAYG +I Q +L+ K N HASLLP++RGAA
Sbjct: 64 LYQPEVVSSLDFAPVLKNYEADLFVVVAYGEIIKQHLLDMPKRACINLHASLLPKYRGAA 123
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I+ G+ ETG+ IM M K +D G + V I+S + L+Q L + HA++E
Sbjct: 124 PIQRSIIEGEKETGVTIMHMVKKMDAGDMIKKVSVQITSEMTYGELEQALCQIGKHALLE 183
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + ++ Q + T+A KI + +++ +SA+++H+ +R ++P+PGAW +
Sbjct: 184 VIKQFDRGEPSRQIQDSHLATFAPKIELEDCELDWNQSAQHLHDLVRGVNPYPGAWCYVK 243
Query: 241 IGNKHERIKLLESQLVE-GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + +R+K+ ++++ PG ++ N I A+ ++ +Q G + +
Sbjct: 244 VNGEQKRLKISRTRVIPYPSNCPGTILDSSKGNLKILTGDQALELVEVQLEGKKTMTSEQ 303
Query: 297 FLLG 300
++ G
Sbjct: 304 WIRG 307
>gi|228474971|ref|ZP_04059699.1| methionyl-tRNA formyltransferase [Staphylococcus hominis SK119]
gi|228270956|gb|EEK12344.1| methionyl-tRNA formyltransferase [Staphylococcus hominis SK119]
Length = 312
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 102/317 (32%), Positives = 172/317 (54%), Gaps = 14/317 (4%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT+ +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A+ +
Sbjct: 1 MTMSKIIFMGTPDFSTKVLEMLI-AEHEVIAVVTQPDRPVG-RKRVLTPPPVKKVAETYH 58
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P K E + + N D+ V A+G ++P+ +L KLG N HASLLP++RG
Sbjct: 59 IPVYQPEKLKDSNELNELMDLNPDLIVTAAFGQLLPESLLKLPKLGAVNVHASLLPKYRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API +AI+ G+ +TGI IM M K LD G + + + I + N + +LS L A +
Sbjct: 119 GAPIHQAIIDGEVQTGITIMYMVKKLDAGNIISQKAIDIEDDDNVGSMHDKLSFLGADLL 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
E + + + PQ ++ T+A IS+ + R+++ +SA+ +HNHIR LSP+P A+
Sbjct: 179 KETLPFIIDGSNESIPQDDSKATFASNISREDERIDWTKSAKEIHNHIRGLSPWPVAYTT 238
Query: 239 MMIGNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACSQ-GAVRIMRLQRAGGRVLD 293
M N +KL ++ + +G G+PGE+I + A+ + +Q +G + +
Sbjct: 239 MNNKN----LKLYQAHIEKGKNGEPGEIIEITKTAIIVGTGSLDAIALTDIQLSGKKRML 294
Query: 294 IGDFLLGCPVI-IGCIV 309
+ +L G +G +
Sbjct: 295 VAQYLSGVQDSLVGTKL 311
>gi|325135220|gb|EGC57845.1| methionyl-tRNA formyltransferase [Neisseria meningitidis M13399]
Length = 308
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 120/313 (38%), Positives = 172/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 EQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIRPTDTANEVHDALMEIGAAAVVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+SK E R+++ SA + IRA +P P AW+E
Sbjct: 180 DLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +G GEV++ +AC + A++I LQ AGG+ ++I
Sbjct: 240 QG----KPMKIRRAEVVAQQGTAGEVLSCSADGLVVACGENALKITELQPAGGKRMNIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G + G +
Sbjct: 296 FAAGRHIEAGTKL 308
>gi|88705379|ref|ZP_01103090.1| Methionyl-tRNA formyltransferase [Congregibacter litoralis KT71]
gi|88700469|gb|EAQ97577.1| Methionyl-tRNA formyltransferase [Congregibacter litoralis KT71]
Length = 319
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 117/306 (38%), Positives = 165/306 (53%), Gaps = 8/306 (2%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M+ LR+ F GT +FA L AL+ S H + +V TQP RPAG RG K S V A+
Sbjct: 1 MSTLRLAFAGTPDFAARHLDALIHSPHDLQAVLTQPDRPAG-RGKKDRASPVKVLAETHD 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP L P E + N D +VVAYGL++PQ +L+ + G N H SLLPRWRG
Sbjct: 60 LPLLQPASLRDPEAVAEIQELNLDALIVVAYGLILPQSVLDLPRCGCLNVHGSLLPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQRAI AGD E+G+ IM MD LDTGP+ PI+++ ++A L +EL+ + +
Sbjct: 120 AAPIQRAIEAGDAESGVTIMLMDAGLDTGPMLAKGLCPITAHTSSADLYEELATIGPSLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+E +D L + Q ++ YA KISK E +++ + A V IRA +P PG +
Sbjct: 180 LEVLDDLPALLSAATVQEDDEACYAAKISKDEALIDWTQPAAVVARRIRAFNPAPGCYSF 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + ++ +S PG ++ + C GAV + RLQ AG + +D
Sbjct: 240 L--DGQRVKVWAAQSATSPSTVPPGTILKSSEHGIAVRCGDGAVILERLQMAGSKAMDAR 297
Query: 296 DFLLGC 301
D L G
Sbjct: 298 DLLRGH 303
>gi|282895661|ref|ZP_06303786.1| Methionyl-tRNA formyltransferase [Raphidiopsis brookii D9]
gi|281199355|gb|EFA74220.1| Methionyl-tRNA formyltransferase [Raphidiopsis brookii D9]
Length = 354
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 92/330 (27%), Positives = 158/330 (47%), Gaps = 25/330 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
++++VF GT FA+ TL+ L+ S +++V TQP + RG + S V A+ +L
Sbjct: 23 SMKIVFFGTPNFAIPTLKKLLNDSRFQVLAVITQPDKRRE-RGNQLTPSPVKTLAKAHNL 81
Query: 61 PALVPTKLGQE--EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
P ++ ++ + NAD VVVAYG ++ +ILN KLG N H S+LP +RG
Sbjct: 82 IVWQPERIKKDSGTLTKLRGLNADFFVVVAYGQILSTKILNMPKLGCINVHGSILPEYRG 141
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQ +I G+ +TG+ M M+ +DTG + +PI N + +L+ + +
Sbjct: 142 AAPIQWSIHKGEIKTGVTTMLMNAGMDTGDMLLKASLPIGLLDNAQIIADQLAEIGGDLL 201
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+E + K + + PQ ++ TYA I+K + +++ R+A +HN IR P
Sbjct: 202 IETLTKFKNGEITPIPQNDSLATYASLINKEDYYLDWSRTAIELHNQIRGFYPNCITTFR 261
Query: 239 -----------MMIGNKHERIKLLESQLVEGE------GKPGEVIN--PNF--TIACSQG 277
+ E K ++S+L + PG V++ I +G
Sbjct: 262 HQPLKIVATVPLESAYIQELPKEIQSKLEKVPDLSAQLAPPGSVLSIIKGLGAVIQTGEG 321
Query: 278 AVRIMRLQRAGGRVLDIGDFLLGCPVIIGC 307
+ + +Q G ++ DF+ G + +G
Sbjct: 322 CLWLKEVQPIGKKLQSGWDFVNGSRLTVGE 351
>gi|83594680|ref|YP_428432.1| methionyl-tRNA formyltransferase [Rhodospirillum rubrum ATCC 11170]
gi|83577594|gb|ABC24145.1| methionyl-tRNA formyltransferase [Rhodospirillum rubrum ATCC 11170]
Length = 309
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 141/313 (45%), Positives = 185/313 (59%), Gaps = 9/313 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MTL VVFMGT F+V L AL ++ ++ +VY QPPR AG RG K + VH A+
Sbjct: 1 MTLSVVFMGTPAFSVPILHALHNNPDLTLRAVYCQPPRAAG-RGKKPRPTPVHAAAEALG 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P + + + F ADVAVV AYGL++P+ +L+A +LG N HASLLPRWRG
Sbjct: 60 IPVFTPARLRDAADQQAFAELAADVAVVAAYGLILPKAVLDAPRLGCVNVHASLLPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPI RAIMAGD ETG+ +M+MD+ LDTG + + +V I+ TA L LS L A +
Sbjct: 120 AAPIHRAIMAGDRETGVTLMQMDEGLDTGAMLRIGRVAITEQTTTASLHDTLSALGAEMI 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
A+ L L Q G+TYA KI K E R+ + SA + IRALSPFPGAW E
Sbjct: 180 GPALRDLAAGTLSGQAQPTEGVTYAAKIDKAEARLEWRTSAAVLDRQIRALSPFPGAWFE 239
Query: 239 MMIGNKHERIKLLESQLVEG--EGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
ERIK+L S++ EG PG++++ T+AC +GAVR++ LQR G L D
Sbjct: 240 ----RDGERIKVLMSRVEEGVPAAPPGQLLDNQLTVACGEGAVRLLCLQRPGRGPLAADD 295
Query: 297 FLLGCPVIIGCIV 309
FL G G +
Sbjct: 296 FLRGYAFPAGLSL 308
>gi|269795115|ref|YP_003314570.1| methionyl-tRNA formyltransferase [Sanguibacter keddieii DSM 10542]
gi|269097300|gb|ACZ21736.1| methionyl-tRNA formyltransferase [Sanguibacter keddieii DSM 10542]
Length = 315
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 95/311 (30%), Positives = 158/311 (50%), Gaps = 4/311 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT AV L+AL+ S H +V+V T+ AG RG + V S V ++A+E +
Sbjct: 1 MRLLFAGTPAVAVPALEALIGSRHEVVAVLTRADARAG-RGRQLVPSPVRQRAEEAGIEV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + E+ + D A VVAYG ++P+ +L + G+ N H S+LP WRGAAP+
Sbjct: 60 ITDRPRSEGFVERLEALQVDCAPVVAYGEILPRDVLAVPRNGWVNLHFSVLPAWRGAAPV 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRA++AGD TG + +++ LDTGPV I + L LS A +V +
Sbjct: 120 QRAVIAGDEVTGASTFIIEEGLDTGPVLGTATETIRRRDTSGDLLDRLSRSGAGLLVATL 179
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D +E + PQ +G+++A K++ + RV + A V +R +P PGAW + G
Sbjct: 180 DAIEDGAIIPVPQPADGVSHAAKLTVEDARVLWTHPAHAVDRLVRGCTPAPGAWTTLPDG 239
Query: 243 NKHERIKLLES-QLVEGEGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
++ + + +E +PGE V + + V + ++ AG + + D+
Sbjct: 240 SRLGLGPVTPLDEPLEVSLEPGEVQVTKSAVRVGTATVPVELGEVRPAGKKPMKAADWAR 299
Query: 300 GCPVIIGCIVG 310
G + G +G
Sbjct: 300 GARLDDGLRLG 310
>gi|167585077|ref|ZP_02377465.1| methionyl-tRNA formyltransferase [Burkholderia ubonensis Bu]
Length = 327
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 124/323 (38%), Positives = 178/323 (55%), Gaps = 20/323 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +P
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYAVEHGMP 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAADAIELLRATPHDVMVVAAYGLLLPQEVLDIPRHGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD +TG+ +M+MD LDTG + +V I+ + TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAQTGVTLMQMDAGLDTGAMLHDARVAIAPDDTTATLHDRLAA 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V+A+ +LE+ P +PQ +G+TYAEKI K E +++ A+ + +RA P
Sbjct: 183 EGARLIVDALAQLERTGSLPATPQPADGVTYAEKIGKHEAALDWREPADVLARRVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVE--GEGKPGEVIN---PNFTIACSQGAVRIMRLQR 286
FPG + +KL + V+ G+ PG +++ +AC GA+R+ +LQ+
Sbjct: 243 FPGGVATLDGAA----LKLWAAAPVDARGDAAPGTIVDAGPDGVIVACGSGALRVTQLQK 298
Query: 287 AGGRVLDIGDFLLGCPVIIGCIV 309
GG+ L +FL G P+ G
Sbjct: 299 PGGKRLPAREFLAGAPLAAGQRF 321
>gi|161870944|ref|YP_001600124.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 053442]
gi|189044571|sp|A9M463|FMT_NEIM0 RecName: Full=Methionyl-tRNA formyltransferase
gi|161596497|gb|ABX74157.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 053442]
Length = 308
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 119/313 (38%), Positives = 173/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 EQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDAGLDTGDVVSEHRYAIRPTDTANEVHDALMEIGAAAVVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q + G+TYA+K+SK E R+++ SA + IRA +P P AW+E
Sbjct: 180 DLQQLQSKGRLNAVKQPKEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +G GEV++ +AC + A++I LQ AGG+ + I
Sbjct: 240 QG----KPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGENALKITELQPAGGKRMSIQA 295
Query: 297 FLLGCPVIIGCIV 309
F G + +G ++
Sbjct: 296 FAAGRTIEVGTVL 308
>gi|298243728|ref|ZP_06967535.1| methionyl-tRNA formyltransferase [Ktedonobacter racemifer DSM
44963]
gi|297556782|gb|EFH90646.1| methionyl-tRNA formyltransferase [Ktedonobacter racemifer DSM
44963]
Length = 325
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 164/319 (51%), Gaps = 25/319 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSS---------SHSIVSVYTQPPRPAGRRGLKSVLSAVHK 53
LR+++MGT +FAV L+AL+ + IV+V T+P +PAG RG V S V +
Sbjct: 2 LRIIYMGTPQFAVPALEALIQHSKPGALLPEGYEIVTVITRPDKPAG-RGRGIVYSPVKQ 60
Query: 54 KAQEFSLPALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
A E LP P + E + ++ AD+ +V A+G ++PQ +L+ G N HASL
Sbjct: 61 TAVEHDLPVWQPGSFKKAENSEALAAYKADLYIVAAFGQILPQNVLDQPHYGTLNVHASL 120
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LP++RGA PI I+ GD E+G++IM +D +DTGPV R + ++ + T L L+
Sbjct: 121 LPKYRGADPIAECILQGDAESGVSIMLLDAGIDTGPVLLRRTLTLAEDETTGTLTPRLAD 180
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
A A++EA+ Q + PQ E T+ + K + R+ + RSA + +RA P+
Sbjct: 181 QGAEALLEALPLWIQGKITPEPQDEEHATHTRMLKKEDGRIQWERSAGAISRQVRAYQPW 240
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEGEGK----PGEVI------NPNFTIACSQGAVRIM 282
P A+ + +K+L ++ ++ + PG + +A G +++
Sbjct: 241 PSAYTTWKG----KLLKILTARPLDRQLATVVAPGTALVREHAGQKVLVVATGSGLLQVQ 296
Query: 283 RLQRAGGRVLDIGDFLLGC 301
RLQ G + + +FL G
Sbjct: 297 RLQLEGKKAMTTEEFLRGY 315
>gi|15607077|ref|NP_214459.1| methionyl-tRNA formyltransferase [Aquifex aeolicus VF5]
gi|6016036|sp|O67890|FMT_AQUAE RecName: Full=Methionyl-tRNA formyltransferase
gi|2984330|gb|AAC07851.1| methionyl-tRNA formyltransferase [Aquifex aeolicus VF5]
Length = 303
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 101/303 (33%), Positives = 156/303 (51%), Gaps = 11/303 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R++FMGT +FAV +L+ + ++ V QP +PAG RG K AQ+ +
Sbjct: 1 MK-RILFMGTPQFAVPSLEEFAKN-FKVIGVVAQPDKPAG-RGKKLTPPPTKVLAQKLGI 57
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P P K + D VVVAYG ++P+ +L+ N HASLLP++RGAA
Sbjct: 58 PIYQPEKKKELIPLV-EELKPDCIVVVAYGKILPKEVLDLPPYKTINLHASLLPKYRGAA 116
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAIMAG+ ETG +M +++ +D G + K+PI N L ++L+ A +V
Sbjct: 117 PIQRAIMAGEKETGNTVMLVNEEMDAGDILAQEKIPIEEEDNFLTLSEKLAKSGAKLLVN 176
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + PQ TYA + K E R+ + SAE+V + IR L P
Sbjct: 177 TLRLWFEGKVKPVPQNHEEATYAPPVQKEEYRICWKASAESVRDRIRGLYPNAYTTFR-- 234
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVIN-PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
RIK+L++++V+ EG PGE+ + +AC + ++ I+ L G+ + DF+
Sbjct: 235 ----GNRIKILKARVVDLEGYPGEIQDTKRLIVACGEKSLEILELISPKGKKMRGEDFMR 290
Query: 300 GCP 302
G
Sbjct: 291 GYR 293
>gi|289435166|ref|YP_003465038.1| hypothetical protein lse_1803 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171410|emb|CBH27954.1| fmt [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 312
Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 99/318 (31%), Positives = 158/318 (49%), Gaps = 15/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT F+V L+ L + + +V+V TQP RP G R V K A E +
Sbjct: 1 MT-KIIFMGTPAFSVPILEQL-AKKYDVVAVVTQPDRPVG-RKRILTPPPVKKTALELGI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E + ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELTELIALQADLLVTAAYGQILPNELLESPKYGSINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS L + ++
Sbjct: 118 APVHYALLDGKKETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSELGSELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ + +T+A IS+ + ++++ R + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITAIPQDPSKVTFARNISREQEKIDWTRPGREIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLES--QLVEGEGKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDI 294
K+ E+ + + G PG +I I G + + +Q AG +DI
Sbjct: 238 EGTPF----KIWEATHEATKTAGDPGTIITDKTTLKIITGDGTLLVPTVIQPAGKPKMDI 293
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 294 HSFMSGAGRNLSKTIRFG 311
>gi|270295852|ref|ZP_06202052.1| methionyl-tRNA formyltransferase [Bacteroides sp. D20]
gi|317479723|ref|ZP_07938845.1| methionyl-tRNA formyltransferase [Bacteroides sp. 4_1_36]
gi|270273256|gb|EFA19118.1| methionyl-tRNA formyltransferase [Bacteroides sp. D20]
gi|316904093|gb|EFV25925.1| methionyl-tRNA formyltransferase [Bacteroides sp. 4_1_36]
Length = 323
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 105/314 (33%), Positives = 162/314 (51%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A E +LP
Sbjct: 7 LRIVYMGTPDFAVEALRCLVEGGYNVVGVITMPDKPAG-RGHKLQFSPVKQYALEHNLPL 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E + + L +V ++P+ + N +LG +N HASLLP++RGAAPI
Sbjct: 66 LQPEKLKDEAFVEALRAWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ GD ETGI + +DTG V +VPI+ N + +L +L +VE +
Sbjct: 126 NWAVINGDTETGITTFFLKHEIDTGEVIQQVRVPIADTDNVGIVHDKLMLLGGRLVVETV 185
Query: 183 DKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
D + + PQ E + A KI K R+++ R + +++ IR LSP+P AW E
Sbjct: 186 DAILAGTVKSIPQEEMAVVGELRPAPKIFKDTCRIDWNRPVKRIYDFIRGLSPYPAAWTE 245
Query: 239 MMIG-NKHERIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVL 292
++ + +K+ E++ + + PG + +A G V I LQ G + L
Sbjct: 246 LVQPGGESVVVKVFETEKIGESHQLTPGTLQTDGKTYIRVAAEDGFVGICSLQLPGKKKL 305
Query: 293 DIGDFLLGCPVIIG 306
+ L G + G
Sbjct: 306 KTDELLRGFRLTEG 319
>gi|304384750|ref|ZP_07367096.1| methionyl-tRNA formyltransferase [Pediococcus acidilactici DSM
20284]
gi|304328944|gb|EFL96164.1| methionyl-tRNA formyltransferase [Pediococcus acidilactici DSM
20284]
Length = 321
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 167/316 (52%), Gaps = 18/316 (5%)
Query: 3 LR-VVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
++ ++FMGT +F+ LQ+L+ ++++ V TQP R G R S V + A + +
Sbjct: 1 MKSIIFMGTPQFSAPILQSLIDHPDYNVIGVVTQPDRRVG-RKHVLTPSPVKQVATKHDI 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K G E E+ ++ NAD+ V A+G +P +++N+ K+ N HASLLP++RG
Sbjct: 60 KVYQPEKLSGSPEMEELINLNADLIVTAAFGQFLPMKLINSVKIAAINVHASLLPKYRGG 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ AIM GD ETG+ I+ M K +D G + K+PI+ + + ++LS+L ++
Sbjct: 120 APVHYAIMNGDAETGVTIIYMVKKMDAGDMLAQAKMPITDQDDVGSMFEKLSILGRDTLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + Q E ++++ I+ + V+ A V +R L PFP A++ M
Sbjct: 180 ETLPKLINGEITPVAQDEEQVSFSPNIAPEQEAVDINLPARLVDAKVRGLRPFPVAYVIM 239
Query: 240 MIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQ-GAVRIMRLQRAGGRVLD 293
+R KL ++ +V+ + PG+V+ +A G + I+ LQ AG + +
Sbjct: 240 EG----QRTKLWKTAVVDQSTDLAPGQVVEKTKHELLVATGDHGVISILELQPAGKQKMS 295
Query: 294 IGDFLLGCPVIIGCIV 309
I D+L G +G +
Sbjct: 296 ITDYLNG----VGDNL 307
>gi|303256330|ref|ZP_07342346.1| methionyl-tRNA formyltransferase [Burkholderiales bacterium 1_1_47]
gi|302861059|gb|EFL84134.1| methionyl-tRNA formyltransferase [Burkholderiales bacterium 1_1_47]
Length = 324
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 110/329 (33%), Positives = 159/329 (48%), Gaps = 28/329 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT EFA L+AL+ S H +V V +QP RPAG RG K SAV A++ ++P
Sbjct: 1 MRVIFAGTPEFAAKALEALIQSEHEVVMVLSQPDRPAG-RGRKLKESAVKALAKQHNIPV 59
Query: 63 LVP-----------------TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGF 105
P + ++ + + L
Sbjct: 60 YTPLSLRVEKGGEETAEVLTKMQEAKADVLVVAAYGLIVPQFVLDIPSGVLPQKFPTLKA 119
Query: 106 YNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAG 165
N H SLLP WRGAAPI RAI GD ETGI +M+MD LDTGP+ R V I+
Sbjct: 120 VNIHGSLLPEWRGAAPIARAIERGDKETGITLMQMDAGLDTGPMLMKRSVEITPEDTAGD 179
Query: 166 LQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNH 225
L + LS L A ++E + E P G TYA K+SK E ++++ SA+ + +
Sbjct: 180 LTETLSRLGAEMLIEYLRNPEAYPPISQP---EGATYASKLSKAEGKIDWTASADKIADK 236
Query: 226 IRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGK-PGEVIN---PNFTIACSQG-AVR 280
+RA +P PG + G++ +I + ++ + G+ PG VI +AC +R
Sbjct: 237 VRAFNPVPGCFC--ACGDEVLKIWMAFAEPGKKTGETPGTVIESSAKGILVACGDSTVLR 294
Query: 281 IMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
I RLQR GG+ LD+ DF+ G G ++
Sbjct: 295 ITRLQRPGGKQLDVRDFIAGHAFSKGEVL 323
>gi|34580778|ref|ZP_00142258.1| methionyl-tRNA formyltransferase [Rickettsia sibirica 246]
gi|28262163|gb|EAA25667.1| methionyl-tRNA formyltransferase [Rickettsia sibirica 246]
Length = 298
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 165/305 (54%), Gaps = 11/305 (3%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT EFAV L+ L+ + H + +V+TQ P+ G RGL S +H+ A E +P P+
Sbjct: 1 MGTPEFAVPALKKLI-THHEVKAVFTQQPKAKG-RGLNLAKSPIHQLAFEHQIPVYTPST 58
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
E NAD+ VV+AYG ++P+ IL A K G N H S LPR RGAAP+QR I
Sbjct: 59 LRNDEIINLINKVNADIIVVIAYGFIVPKAILEAKKYGCLNIHPSDLPRHRGAAPLQRTI 118
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ GD ++ + IM+MD LDTG + + I L + + L A +++ + ++
Sbjct: 119 IEGDRKSSVCIMRMDTGLDTGDILMKEDFDLEERITLEELHNKCANLGAELLIKTLANID 178
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
Q +G+TYA K++K E ++N+ SA + IR ++P+PGA+ +
Sbjct: 179 NIVPIT--QPSDGVTYAHKLTKEEGKINWHESAYKIDCKIRGMNPWPGAYFSY----NDK 232
Query: 247 RIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVI 304
IK+LE++ + + G VI+ IAC G +R+ +LQ+ + L+I +FL G ++
Sbjct: 233 IIKILEAEYLNADHHCTSGTVISDKLEIACGSGILRVKKLQQESKKALNIEEFLRGTNIL 292
Query: 305 IGCIV 309
++
Sbjct: 293 KDTVL 297
>gi|253566322|ref|ZP_04843776.1| methionyl-tRNA formyltransferase [Bacteroides sp. 3_2_5]
gi|251945426|gb|EES85864.1| methionyl-tRNA formyltransferase [Bacteroides sp. 3_2_5]
gi|301164634|emb|CBW24193.1| putative methionyl-tRNA formyltransferase [Bacteroides fragilis
638R]
Length = 324
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 105/318 (33%), Positives = 163/318 (51%), Gaps = 14/318 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV LQ LV +++V V T P +PAG RG K S V + A +
Sbjct: 1 MKKEDLRIVYMGTPDFAVEALQCLVEGGYNVVGVITMPDKPAG-RGHKIQYSPVKQYALD 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P KL EE+ Q L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 60 HQLPLLQPEKLKDEEFIQALREWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V ++PI+ N + +L L
Sbjct: 120 GAAPINWAVINGDTETGITTFFLKHEIDTGEVIQQVRIPIADTDNVEIVHDKLMHLGGRL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
++E +D + + + PQ E + A KI K R+++ + + V++ IR LSP+P
Sbjct: 180 VIETVDAILEGKVKSIPQEEMAVAGELRPAPKIFKETCRIDWNQPVKRVYDFIRGLSPYP 239
Query: 234 GAWLEMMIG-NKHERIKLLESQLVE--GEGKPGEVINPN---FTIACSQGAVRIMRLQRA 287
AW E++ + +K+ ES+ + PG ++ +A G V ++ LQ
Sbjct: 240 AAWSELVNPEGEAVVVKIFESEKLPKVHTLAPGSIVTDGKNFLRVAVPDGFVNVLSLQLP 299
Query: 288 GGRVLDIGDFLLGCPVII 305
G + L + L G +
Sbjct: 300 GKKRLKTDELLRGFYLTE 317
>gi|319639523|ref|ZP_07994270.1| methionyl-tRNA formyltransferase [Neisseria mucosa C102]
gi|317399094|gb|EFV79768.1| methionyl-tRNA formyltransferase [Neisseria mucosa C102]
Length = 308
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 122/313 (38%), Positives = 177/313 (56%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ S V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKG-RGMQLTASPVKQAALELGLTV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+A K G N HASLLPRWRGAA
Sbjct: 60 AQPEKLRNNAEALQMLKDTGADVMVVAAYGLILPQEVLDAPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI +GD ETG+ IM+MD LDTG V R+ I + L L A A+V
Sbjct: 120 PIQRAIESGDAETGVCIMQMDIGLDTGAVVSERRYAIQPTDTANEVHDALMGLGAEAIVA 179
Query: 181 AMDK-LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + L Q E G+TYA+K+SK E R+++ +SA+ + IRA +P P AW+E
Sbjct: 180 DLQRLQAEGRLNAVKQPEEGVTYAQKLSKEEARIDWNQSADIIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +GK GEV+ + +AC + A+ I LQ +G + + I
Sbjct: 240 QG----KPMKIWRAEVVAKQGKAGEVLSCTSDGLLVACGKNALNITELQPSGSKRMSIQA 295
Query: 297 FLLGCPVIIGCIV 309
F G + +G ++
Sbjct: 296 FAAGRTIEVGTVL 308
>gi|237736620|ref|ZP_04567101.1| methionyl-tRNA formyltransferase [Fusobacterium mortiferum ATCC
9817]
gi|229420482|gb|EEO35529.1| methionyl-tRNA formyltransferase [Fusobacterium mortiferum ATCC
9817]
Length = 310
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 94/312 (30%), Positives = 163/312 (52%), Gaps = 8/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT EFAV + L +S + IV +T+ +P RG K + V + A E ++P
Sbjct: 1 MRILFMGTPEFAVPSFDVL-NSEYEIVGAFTKIDKP-NMRGKKIKFTPVKEYALEHNIPV 58
Query: 63 LVPTKLGQEEYEQ-FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L EE + N D+ VVVAYG ++P+ I+ K G N H+SLLP++RGAAP
Sbjct: 59 YQPNTLKSEETKNLIKELNPDLIVVVAYGKILPKEIIEMPKYGVINVHSSLLPKYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G+ E+G++IM + + LD G V K I+ L L L A ++EA
Sbjct: 119 INAALIHGEEESGVSIMYIAEELDAGDVILTVKTKITDEDTFLTLHDRLKELGAKGLIEA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ P PQ + T+ + SK + ++N+ ++ + N +R ++PFP A+ +
Sbjct: 179 VRLIEKGEAPRIPQNHSEATFVKPFSKDDCKINWSKTEREIFNFVRGMNPFPSAFT-ICE 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + E+ G GEV++ + G+V + +++ ++L+ D
Sbjct: 238 DKIFKIYGVKENFKTYESGVCGEVVDIKKGEGVIVKTGNGSVILTQVKPENKKLLNGADI 297
Query: 298 LLGCPVIIGCIV 309
+ G + +G I+
Sbjct: 298 INGGILKVGDIL 309
>gi|254784304|ref|YP_003071732.1| methionyl-tRNA formyltransferase [Teredinibacter turnerae T7901]
gi|237685202|gb|ACR12466.1| methionyl-tRNA formyltransferase [Teredinibacter turnerae T7901]
Length = 321
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 123/313 (39%), Positives = 177/313 (56%), Gaps = 13/313 (4%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R++F GT EFA A L+AL++S H IV+VYTQP RPAG RG K S V AQE LP
Sbjct: 7 RLIFAGTPEFAAAHLRALLASEHDIVAVYTQPDRPAG-RGKKLTASPVKALAQEHDLPVY 65
Query: 64 VPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P E + + ADV +VVAYGL++PQ +LNA +LG N H S+LPRWRGAAPI
Sbjct: 66 QPASLRAAEAQAELAALGADVMIVVAYGLILPQAVLNAPRLGCLNVHGSILPRWRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI AGD +G+ IM+MD LDTG + R+ PI +N + L L+ L A+++ +
Sbjct: 126 QRAIEAGDTHSGVTIMQMDAGLDTGAMLLKRECPIQTNDTASDLHDRLAELGPPALLDTL 185
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+LE +L Q ++ YA KI K E +++ A +H IRA +PFP + +
Sbjct: 186 AQLE--DLTPEAQDDSQANYAHKIEKAEAVLDWRLPALQLHRQIRAFNPFPICYTLLDDD 243
Query: 243 NKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
R+++ ++L + G+ G V+ IAC + ++ + RLQ G + + +F
Sbjct: 244 ----RLRIHSAELCDLSGESGTVVAADRERLVIACGEASLAVTRLQLPGKKAMTPAEFAN 299
Query: 300 GCPV--IIGCIVG 310
G +G +G
Sbjct: 300 GHSHLCPVGTRLG 312
>gi|221214669|ref|ZP_03587639.1| methionyl-tRNA formyltransferase [Burkholderia multivorans CGD1]
gi|221165559|gb|EED98035.1| methionyl-tRNA formyltransferase [Burkholderia multivorans CGD1]
Length = 327
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 126/323 (39%), Positives = 179/323 (55%), Gaps = 20/323 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLRV+F GT EFA A L A+ + ++ V TQP RPAG RG+K SAV + A E LP
Sbjct: 4 TLRVIFAGTPEFAAAALAAIHDAGFAVPLVLTQPDRPAG-RGMKLQASAVKRYALEHGLP 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAVEAIELLRATPHDVMVVAAYGLLLPQEVLDIPRHGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + ++ I+S+ TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMIQESRIAIASDDTTATLHDRLAA 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V+A+ +LE++ + +PQ +G+TYAEKI K E +++ R A+ + +RA P
Sbjct: 183 DGARLIVDALARLERDGMLAATPQPADGVTYAEKIGKHEAALDWRRPADVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEG--KPGEVIN---PNFTIACSQGAVRIMRLQR 286
FPG + K+ ++ G G PG ++ +AC GA+R+ +LQ+
Sbjct: 243 FPGGVATLDGAAI----KIWAAEPATGRGDATPGTIVEAAPDGVIVACGTGALRVTQLQK 298
Query: 287 AGGRVLDIGDFLLGCPVIIGCIV 309
GG+ L +FL G P+ G
Sbjct: 299 PGGKRLPAREFLAGSPLAAGQRF 321
>gi|119716669|ref|YP_923634.1| methionyl-tRNA formyltransferase [Nocardioides sp. JS614]
gi|166215490|sp|A1SJG2|FMT_NOCSJ RecName: Full=Methionyl-tRNA formyltransferase
gi|119537330|gb|ABL81947.1| methionyl-tRNA formyltransferase [Nocardioides sp. JS614]
Length = 316
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 107/315 (33%), Positives = 158/315 (50%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVF GT E A+ L A+ +SSH +V+V T+P PAG RG + + S V +A+E +P
Sbjct: 1 MRVVFAGTPEVAIPVLDAVAASSHELVAVVTRPDAPAG-RGRRLLASPVALRAEELGVPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P E+++ + D VVAYG ++PQ L+ G+ N H S LP WRGAAP
Sbjct: 60 LKPAHPKDPEFQEQLRALRPDCCPVVAYGALLPQAALDIPVHGWVNLHFSALPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q AI AGD TG ++ K LD GP + I L L+ A MV
Sbjct: 120 VQHAIWAGDEVTGATTFRIVKELDAGPTYGVMTERIRPTDTAGDLLARLAEGGAGLMVAT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D +E +L PQ G++YA K+ + RV++ R A + + +RA +P PGAW +
Sbjct: 180 LDGIEDGSLEARPQQAEGVSYAPKVEVEDARVDWSRPAVVIDHQVRACTPAPGAWTTVAG 239
Query: 242 GNKHERIKLLESQLVEGEGK----PGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
ER+KL + G PGE V + + AVR+ ++ G + +
Sbjct: 240 ----ERLKLGPVTHADAHGSQGLGPGELGVGKHDVLVGTGTTAVRLGDVRPHGRKQMAAA 295
Query: 296 DFLLGCPVIIGCIVG 310
D+ G + G +G
Sbjct: 296 DWARGARLQTGVRIG 310
>gi|257452389|ref|ZP_05617688.1| methionyl-tRNA formyltransferase [Fusobacterium sp. 3_1_5R]
gi|257465818|ref|ZP_05630129.1| methionyl-tRNA formyltransferase [Fusobacterium gonidiaformans ATCC
25563]
gi|315916975|ref|ZP_07913215.1| methionyl-tRNA formyltransferase [Fusobacterium gonidiaformans ATCC
25563]
gi|317058932|ref|ZP_07923417.1| methionyl-tRNA formyltransferase [Fusobacterium sp. 3_1_5R]
gi|313684608|gb|EFS21443.1| methionyl-tRNA formyltransferase [Fusobacterium sp. 3_1_5R]
gi|313690850|gb|EFS27685.1| methionyl-tRNA formyltransferase [Fusobacterium gonidiaformans ATCC
25563]
Length = 310
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 94/312 (30%), Positives = 170/312 (54%), Gaps = 8/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT +FAV++L+ L H +++V+T+ +P +RG K + V + A E +L
Sbjct: 1 MRILFMGTPDFAVSSLRKL-QEEHEVIAVFTKIDKP-NQRGKKIQYTPVKQYALEHNLEV 58
Query: 63 LVPTKLGQEEYE-QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P + E + + D+ VVVAYG ++P+ IL K G N H+SLLP++RGAAP
Sbjct: 59 IQPKSVKDMEIIEKIKEYRPDLIVVVAYGKILPKEILEIPKYGVINVHSSLLPKYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I +I+ G+ E+G++IM + + LD GPV V I N L +L + A +++
Sbjct: 119 IHASIIHGEKESGVSIMYVVEELDAGPVLAQESVEILEEDNCESLHNKLQEIGASLLLKT 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ K+E+ + PQ E +++ + K + ++++ +SA + N +R + PFPGA+ +
Sbjct: 179 ISKIEKQEIQAIPQDETKVSFVKPFQKEDCKIDWNQSAREIFNFVRGMDPFPGAFT-LYH 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
G + + ++ E + + EGK GE++ +A +G V I + + ++L D
Sbjct: 238 GKQLKIGRVEEEKEMILEGKAGEILAFVKGKGIVVATGKGNVVITKAKPENKKMLSGVDL 297
Query: 298 LLGCPVIIGCIV 309
+ G + G
Sbjct: 298 INGNFLQEGEHF 309
>gi|254522701|ref|ZP_05134756.1| methionyl-tRNA formyltransferase [Stenotrophomonas sp. SKA14]
gi|219720292|gb|EED38817.1| methionyl-tRNA formyltransferase [Stenotrophomonas sp. SKA14]
Length = 307
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 117/312 (37%), Positives = 176/312 (56%), Gaps = 14/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFAV++L+A + H +V+VYTQP RPAG RG S V +A +P
Sbjct: 1 MRIVFAGTPEFAVSSLRA-AARHHEVVAVYTQPDRPAG-RGRGLAPSPVKLEAVARGIPV 58
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L + +Q D+ VVVAYGL++P+ +L G +N HASLLPRWRGAAP
Sbjct: 59 YQPESLKGDAAQQQLRDLQPDLMVVVAYGLILPKAVLAIPTHGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD +TG+ +M+M+ LDTGPV +++PI+ L +L+ L A + +
Sbjct: 119 IQRAIQAGDAKTGVCLMQMEAGLDTGPVLLHQELPIAVTDTGGQLHDKLAELGAQVLSDG 178
Query: 182 MDKLEQNNLPL-SPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L P+ PQ E G+TYA K+ K E ++++ + A + +RA +P+P A +
Sbjct: 179 LGLLRAGIKPIARPQPEQGVTYAHKLDKAEAKLDWAQDAAALARTVRAFNPWPIAEATLA 238
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
ER+++ + ++ PG V+ IAC QG +R+ LQR GG+ +
Sbjct: 239 G----ERVRIHGAVALDEAHGQAPGTVLAAGRDGIDIACGQGVLRLRVLQREGGKAITAA 294
Query: 296 DFLLGCP-VIIG 306
D+L + +G
Sbjct: 295 DYLNARRDLRVG 306
>gi|51459719|gb|AAU03682.1| Formylmethionyl-transfer ribonucleic synthetase [Rickettsia typhi
str. Wilmington]
Length = 298
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 106/305 (34%), Positives = 165/305 (54%), Gaps = 11/305 (3%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT EFAV TL+ L+ H + +V+TQ P+ G RGL S +H+ A E +P P+
Sbjct: 1 MGTPEFAVPTLKKLI-IHHEVKAVFTQQPKAKG-RGLYLAKSPIHQLAFEHQIPVYSPST 58
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
E +AD+ VV+AYG ++P+ IL A K G N H S LPR RGAAP+QR I
Sbjct: 59 LRNDETINLINKVDADIIVVIAYGFIVPKAILEAKKYGCLNIHPSDLPRHRGAAPLQRTI 118
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ GD ++ + IM+MD LDTG + + + I L + L A +++ + ++
Sbjct: 119 IEGDLKSSVCIMRMDSGLDTGDILLKEDLNLEKRITLDELSNRCAHLGAELLIQTLANID 178
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
Q NG+TYA K++K E ++N+ SA ++ IR ++P+PGA+ +
Sbjct: 179 NIVPV--KQSSNGVTYAHKLTKAEGKINWYESAYSIDCKIRGMNPWPGAYFSY----NDK 232
Query: 247 RIKLLESQLVEGEGK--PGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVI 304
IK+LE++ + PG VI+ IAC G +R+ +LQ+ + L+I FL G ++
Sbjct: 233 IIKILEAEYLNYNHHFIPGTVISNKLEIACGSGILRVTKLQQESKKALNIEAFLRGTNIL 292
Query: 305 IGCIV 309
I+
Sbjct: 293 KDTIL 297
>gi|300705524|ref|YP_003747127.1| 10-formyltetrahydrofolate:l-methionyl-tRNA(fmet)
N-formyltransferase [Ralstonia solanacearum CFBP2957]
gi|299073188|emb|CBJ44546.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Ralstonia solanacearum CFBP2957]
Length = 327
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 126/325 (38%), Positives = 172/325 (52%), Gaps = 22/325 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL- 60
TLR+ F GT EFA L A+ + +V+V +QP RPAG RG+ S V + A L
Sbjct: 4 TLRIAFAGTPEFAQIALAAIHQAGFPLVAVLSQPDRPAG-RGMHLQASPVKQYAISHGLG 62
Query: 61 PALVPTKLGQEEYEQFL---------SFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
P L P L + + DV VV AYGL++PQ +L+ + G N H S
Sbjct: 63 PILQPPSLRRTGKYPQEAAEAIDALSAQRPDVMVVAAYGLILPQEVLDLPRFGCINIHGS 122
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLPRWRGAAPI RAI AGD ETGI +M+MD LDTG + M VPI T L L+
Sbjct: 123 LLPRWRGAAPIHRAIEAGDAETGITLMQMDAGLDTGDMITMEHVPIGLTDTTGTLHDTLA 182
Query: 172 VLCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
L +VEA+ +L Q+ P +PQ G+TYAEKI+K E +++ R + + + A +
Sbjct: 183 ALGGRMVVEALARLAQDGRLPAAPQPAEGVTYAEKIAKEEAALDWSRQSAALLRQVHAFN 242
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLV---EGEGKPGEVI---NPNFTIACSQGAVRIMRL 284
PFPGA E+ IK ++ + + +PG V+ IAC GA+R+ +L
Sbjct: 243 PFPGASAEL----DGVTIKFWQATALPDRPADAEPGTVLAADADGVVIACGAGALRVTQL 298
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
Q+ GG+ L +FL G V G
Sbjct: 299 QKPGGKRLPAREFLQGLAVRPGQRF 323
>gi|331004327|ref|ZP_08327802.1| methionyl-tRNA formyltransferase [Lachnospiraceae oral taxon 107
str. F0167]
gi|330411393|gb|EGG90808.1| methionyl-tRNA formyltransferase [Lachnospiraceae oral taxon 107
str. F0167]
Length = 313
Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 99/320 (30%), Positives = 168/320 (52%), Gaps = 20/320 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +F++ L+ LV + H++ V T+ + RG + + V + A ++P
Sbjct: 1 MKIVFMGTPDFSLEPLKELVKAGHNVSLVLTREDKKR-NRG-ELTPTPVKELANSLNIPV 58
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P+K+ EE + L D VVVAYG ++P+ IL+ +LG N HASLLP +RGAAP
Sbjct: 59 LTPSKMKDEELIKRLKAENADFFVVVAYGKILPKEILDIPRLGCINIHASLLPEYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ +I+ G +TGI M MD+ LDTG + ++ I L + L++L A+V+
Sbjct: 119 IQWSIIDGREKTGITTMLMDEGLDTGDILKQYEIIIDKKETGGSLFERLAILGGEAIVDT 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + N+ PQ E YA+ ISK ++F +SA + IR ++P+P A+ +
Sbjct: 179 IKNFD--NIKPIPQGETTTEYAKMISKSMGEIDFNKSAVQIERLIRGMNPWPSAYTKYQG 236
Query: 242 GNKHERIKLLESQLVEGEGKP---------GEVI--NPNFTIACSQGAVRIMRLQRAGGR 290
+ +K+ ++ + + G++ N I C+Q + ++ LQ G +
Sbjct: 237 ----KVLKIWDAAPADDISEIQNINLNENYGKIYSFNSRIFIVCNQSVLEVLSLQLEGKK 292
Query: 291 VLDIGDFLLGCPVIIGCIVG 310
+ DFL+G + G +G
Sbjct: 293 RMSAKDFLMGKEIEQGYKLG 312
>gi|313637332|gb|EFS02817.1| methionyl-tRNA formyltransferase [Listeria seeligeri FSL S4-171]
Length = 312
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 98/318 (30%), Positives = 158/318 (49%), Gaps = 15/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT F+V L+ L + + +V+V TQP RP G R V K A E +
Sbjct: 1 MT-KIIFMGTPAFSVPILEQL-AKEYDVVAVVTQPDRPVG-RKRILTPPPVKKTALELGI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E + ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELTELIALQADLLVTAAYGQILPNELLESPKHGSINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS L + ++
Sbjct: 118 APVHYALLDGKKETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSELGSELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ + +T+A IS+ + ++++ R + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITAIPQDPSKVTFARNISREQEKIDWTRPGREIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLES--QLVEGEGKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDI 294
K+ E+ + + G PG +I I G + + +Q AG +D+
Sbjct: 238 EGTPF----KIWEATHEATKTAGDPGTIITDKTTLKIITGDGTLLVPTVIQPAGKPKMDV 293
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 294 HSFMSGAGRNLSKTIRFG 311
>gi|332880169|ref|ZP_08447851.1| methionyl-tRNA formyltransferase [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332681928|gb|EGJ54843.1| methionyl-tRNA formyltransferase [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 326
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 94/324 (29%), Positives = 151/324 (46%), Gaps = 22/324 (6%)
Query: 1 MT----LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ 56
M LR+V+MGT EFAV +L+ LV +++V V T P +P GR S V + A
Sbjct: 1 MKKKEDLRIVYMGTPEFAVESLKCLVEGGYNVVGVVTMPDKPMGRHQDVLQASPVKQYAV 60
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
E L L P KL E + + L +V ++P+ + N +G +N HASLLP++
Sbjct: 61 EHGLRVLQPVKLKDEAFVEELRSLRADLQIVVAFRMLPEVVWNMPPMGTFNLHASLLPQY 120
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPI A++ G+ ETGI + +DTG V ++PI+ N + +L L
Sbjct: 121 RGAAPINWAVINGETETGITTFFLKHEIDTGEVIQQVRIPIADTDNVGVVHDKLMELGGR 180
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENV-----HNHIRALSP 231
+VE +D + + + PQ E + + + + ++ +R LSP
Sbjct: 181 LVVETVDHILTDTIHPIPQEEMAVKGPLHPAPKIFKETCKMDWQGRPLKPLYDFVRGLSP 240
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKP-------GEVINPN---FTIACSQGAVRI 281
+P AW E K+ ++ E E +P G+V++ +A G +R+
Sbjct: 241 YPAAWSE---MKDEAIGKVYTLKIYETEKEPCVCHEPAGKVVSDGKTYLKVAVDGGYLRL 297
Query: 282 MRLQRAGGRVLDIGDFLLGCPVII 305
+Q G + + I DFL G +
Sbjct: 298 KEIQLTGKKRMRIEDFLRGFRMPE 321
>gi|325926149|ref|ZP_08187510.1| methionyl-tRNA formyltransferase [Xanthomonas perforans 91-118]
gi|325543494|gb|EGD14916.1| methionyl-tRNA formyltransferase [Xanthomonas perforans 91-118]
Length = 307
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 168/305 (55%), Gaps = 9/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT +FAV +L+A + H +V+VYTQP RPAG RG S V +A +P
Sbjct: 1 MRIIFAGTPDFAVPSLRA-AAQRHEVVAVYTQPDRPAG-RGRGLTPSPVKLEAIARGIPV 58
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E +AD+ VVVAYGL++P+ +L A G +N HASLLPRWRGAAP
Sbjct: 59 FQPQTLRSPEALATLRKLDADLMVVVAYGLILPKAVLAAPTHGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETG+ +M+M+ LDTGPV +++ I L L+ L A + +
Sbjct: 119 IQRAIEAGDTETGVCLMQMEAGLDTGPVLLSQRIEIGEQETGGQLHDRLAALGAQVLSDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ ++G+TYA K+ K + R+++ + A+ + +RA +P+P E +
Sbjct: 179 LGLLRAGIRPVAQPQPDDGVTYAHKLDKAQARLDWAQPAQELARRVRAFNPWPV--AEAI 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + R+ + + + PG ++ IAC +GA+R+ LQR GG+ + D+
Sbjct: 237 LAGERVRLHGAVALELAHQHPPGTLLAASKQGIDIACGEGALRVRVLQREGGKAITAADY 296
Query: 298 LLGCP 302
L
Sbjct: 297 LNARR 301
>gi|253570300|ref|ZP_04847709.1| methionyl-tRNA formyltransferase [Bacteroides sp. 1_1_6]
gi|251840681|gb|EES68763.1| methionyl-tRNA formyltransferase [Bacteroides sp. 1_1_6]
Length = 322
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 105/319 (32%), Positives = 163/319 (51%), Gaps = 14/319 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A E
Sbjct: 1 MKKEDLRIVYMGTPDFAVEALRQLVEGGYNVVGVITMPDKPAG-RGHKIQYSPVKQYALE 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+LP L P KL E + Q L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 60 QNLPLLQPEKLKDEAFVQALREWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V +VPI+ N + +L VL
Sbjct: 120 GAAPINWAVINGDTETGITTFFLQHEIDTGKVIQQVRVPIADTDNVEVVHDKLMVLGGKL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
++E +D + + + Q + + A KI K R+++ + V++ IR LSP+P
Sbjct: 180 VLETVDAILNDTVKPIAQEDMAVVGELRPAPKIFKETCRIDWNSPVKKVYDFIRGLSPYP 239
Query: 234 GAWLEMMIG-NKHERIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQRA 287
AW E++ + +K+ ES+ + + G V+ +A G V ++ LQ
Sbjct: 240 AAWSELVSPEGEAVVMKIFESEKIYEAHQLAVGTVVTDGKKYIKVAVPDGFVSVLSLQLP 299
Query: 288 GGRVLDIGDFLLGCPVIIG 306
G + L + L G + G
Sbjct: 300 GKKRLKTDELLRGFRLSDG 318
>gi|329957242|ref|ZP_08297762.1| methionyl-tRNA formyltransferase [Bacteroides clarus YIT 12056]
gi|328522955|gb|EGF50058.1| methionyl-tRNA formyltransferase [Bacteroides clarus YIT 12056]
Length = 324
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 105/318 (33%), Positives = 161/318 (50%), Gaps = 14/318 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT EFAV L+ LV +++V V T P +PAG RG K S V + A E
Sbjct: 3 MKKEDLRIVYMGTPEFAVEPLRCLVEGGYNVVGVITMPDKPAG-RGHKVQFSPVKQYALE 61
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P KL E + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 62 HDLPLLQPEKLKDETFVGALRAWNADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 121
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V +VPI+ N + +L +L
Sbjct: 122 GAAPINWAVINGDTETGITTFFLKHEIDTGEVIQQVRVPIADTDNVGIVHDKLMMLGGRL 181
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ E +D + + + PQ E + A KI K R+++ + + +++ IR LSP+P
Sbjct: 182 VTETVDAILADAVRSVPQEEMVVAGELRPAPKIFKDTCRIDWSQPVKRIYDFIRGLSPYP 241
Query: 234 GAWLEMMIGNKHERI-KLLESQLVE--GEGKPGEVINPN---FTIACSQGAVRIMRLQRA 287
AW E++ + + K+ E++ VE PG + IA + G + + LQ
Sbjct: 242 AAWTELVQPDGTVVVLKIFETEKVERPHSFAPGTLQTDGKTYIRIAGADGWISVNALQLP 301
Query: 288 GGRVLDIGDFLLGCPVII 305
G + L + L G +
Sbjct: 302 GKKRLKTDELLRGFKLTE 319
>gi|293602353|ref|ZP_06684799.1| methionyl-tRNA formyltransferase [Achromobacter piechaudii ATCC
43553]
gi|292819115|gb|EFF78150.1| methionyl-tRNA formyltransferase [Achromobacter piechaudii ATCC
43553]
Length = 313
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 118/312 (37%), Positives = 171/312 (54%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA AL ++ H I V TQP RPAG RGLK S V + A + +P
Sbjct: 1 MRLVFAGTPEFARIAFDALRAAGHDIALVMTQPDRPAG-RGLKLTPSPVKQAALDAGIPV 59
Query: 63 LVPTKLGQEEYEQFLSFN---------ADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P L + + DV VV AYGL++PQ +L+ +LG N HASLL
Sbjct: 60 AQPRSLRLDGRYPDEAAEARALLEQVAPDVMVVAAYGLILPQWVLDLPRLGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPIQRAI AGD +TG+ IM+MD+ LDTG + VPI ++ + A L L+
Sbjct: 120 PRWRGAAPIQRAIEAGDAQTGVTIMQMDQGLDTGDMLLEVVVPIGADTDAAQLHDALAAA 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+V+A++ LE++ L Q E G+TYA K+ K E ++ + A+ + +RA +P P
Sbjct: 180 GGQAIVQALEALEKDGLTPRKQPEAGVTYAAKLDKAEAALDCTQPAQLLARRVRAFNPVP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGR 290
GA + + ++ ++ +PG V+ IAC G +R++ LQ+AGG+
Sbjct: 240 GASIRLPGLPDPVKVWRAQALEGAATAEPGSVLRADGQGIDIACGDGVLRLLELQKAGGK 299
Query: 291 VLDIGDFLLGCP 302
+ F+ G
Sbjct: 300 RQPVDVFVRGWQ 311
>gi|29349353|ref|NP_812856.1| methionyl-tRNA formyltransferase [Bacteroides thetaiotaomicron
VPI-5482]
gi|33516862|sp|Q8A0S6|FMT_BACTN RecName: Full=Methionyl-tRNA formyltransferase
gi|29341261|gb|AAO79050.1| methionyl-tRNA formyltransferase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 322
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 104/319 (32%), Positives = 163/319 (51%), Gaps = 14/319 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A E
Sbjct: 1 MKKEDLRIVYMGTPDFAVEALRQLVEGGYNVVGVITMPDKPAG-RGHKIQYSPVKQYALE 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+LP L P KL E + Q L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 60 QNLPLLQPEKLKDEAFVQALREWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V +VPI+ N + +L +L
Sbjct: 120 GAAPINWAVINGDTETGITTFFLQHEIDTGKVIQQVRVPIADTDNVEVVHDKLMILGGKL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
++E +D + + + Q + + A KI K R+++ + V++ IR LSP+P
Sbjct: 180 VLETVDAILNDTVKPIAQEDMAVVGELRPAPKIFKETCRIDWNSPVKKVYDFIRGLSPYP 239
Query: 234 GAWLEMMIG-NKHERIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQRA 287
AW E++ + +K+ ES+ + + G V+ +A G V ++ LQ
Sbjct: 240 AAWSELVSPEGEAVVMKIFESEKIYEAHQLPVGTVVTDGKKYIKVAVPDGFVSVLSLQLP 299
Query: 288 GGRVLDIGDFLLGCPVIIG 306
G + L + L G + G
Sbjct: 300 GKKRLKTDELLRGFRLSDG 318
>gi|330999025|ref|ZP_08322750.1| methionyl-tRNA formyltransferase [Parasutterella excrementihominis
YIT 11859]
gi|329575767|gb|EGG57293.1| methionyl-tRNA formyltransferase [Parasutterella excrementihominis
YIT 11859]
Length = 324
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 110/329 (33%), Positives = 159/329 (48%), Gaps = 28/329 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT EFA L+AL+ S H +V V +QP RPAG RG K SAV A++ ++P
Sbjct: 1 MRVIFAGTPEFAAKALEALIQSEHEVVMVLSQPDRPAG-RGRKLKESAVKSLAKQHNIPV 59
Query: 63 LVP-----------------TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGF 105
P + ++ + + L
Sbjct: 60 YTPLSLRVEKGGEETAEVLTKMQEAKADVLVVAAYGLIVPQFVLDIPSGVLPQKFPTLKA 119
Query: 106 YNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAG 165
N H SLLP WRGAAPI RAI GD ETGI +M+MD LDTGP+ R V I+
Sbjct: 120 VNIHGSLLPEWRGAAPIARAIERGDKETGITLMQMDAGLDTGPMLMKRSVEITPEDTAGD 179
Query: 166 LQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNH 225
L + LS L A ++E + E P G TYA K+SK E ++++ SA+ + +
Sbjct: 180 LTETLSRLGAEMLIEYLRNPEAYPPISQP---EGATYASKLSKAEGKIDWTASADKIADK 236
Query: 226 IRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGK-PGEVIN---PNFTIACSQG-AVR 280
+RA +P PG + G++ +I + ++ + G+ PG VI +AC +R
Sbjct: 237 VRAFNPVPGCFC--ACGDEVLKIWMAFAEPGKKTGETPGTVIESSAKGILVACGDSTVLR 294
Query: 281 IMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
I RLQR GG+ LD+ DF+ G G ++
Sbjct: 295 ITRLQRPGGKQLDVRDFIAGHAFSKGEVL 323
>gi|299068353|emb|CBJ39577.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Ralstonia solanacearum CMR15]
Length = 327
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 123/325 (37%), Positives = 172/325 (52%), Gaps = 22/325 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL- 60
TLRV F GT EFA L A+ + +V+V +QP RPAG RG+ S V + A L
Sbjct: 4 TLRVAFAGTPEFAQIALAAIHQAGLPVVAVLSQPDRPAG-RGMHLQASPVKQYAVSHGLG 62
Query: 61 PALV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
P L + + + DV VV AYGL++PQ +L+ + G N H S
Sbjct: 63 PILQPPSLRRTGKYPQEAAAAIDALSAQQPDVMVVAAYGLILPQEVLDLPRFGCINIHGS 122
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLPRWRGAAPI RAI AGD ETGI +M+MD LDTG + VPI T L L+
Sbjct: 123 LLPRWRGAAPIHRAIEAGDAETGITLMQMDAGLDTGDMIATEHVPIGLTDTTGTLHDTLA 182
Query: 172 VLCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
L +VEA+ +L Q+ P +PQ G+TYAEKI+K E +++ R + + + A +
Sbjct: 183 ALGGRMVVEALARLAQDGRLPATPQPAEGVTYAEKIAKEEAALDWSRQSAALLRQVHAFN 242
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLVE---GEGKPGEVIN---PNFTIACSQGAVRIMRL 284
PFPGA E+ IK +++ + + +PG V+ IAC GA+R+ +L
Sbjct: 243 PFPGASAEL----DGVTIKFWQAEALPDRPADAQPGAVLAADADGVVIACGAGALRVTQL 298
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
Q+ GG+ + +FL G P+ G
Sbjct: 299 QKPGGKRMPAREFLQGLPIRSGQRF 323
>gi|124485019|ref|YP_001029635.1| methionyl-tRNA formyltransferase [Methanocorpusculum labreanum Z]
gi|124362560|gb|ABN06368.1| methionyl-tRNA formyltransferase [Methanocorpusculum labreanum Z]
Length = 309
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 108/314 (34%), Positives = 173/314 (55%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT E+A+++L+A+ + H IV + T+ +P RRG + S V + A E +P
Sbjct: 1 MRVLFMGTPEYALSSLRAVF-AKHEIVGILTRADKP-NRRGNRIEFSPVKQFALEHGIPV 58
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + L + D++VVVAYG++IP IL K N H SLLP++RGAAP
Sbjct: 59 FQPENMKDPALLEELKALSPDISVVVAYGMMIPDAILELPKHNTINLHGSLLPKYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q +++ GD+ETG++IM + LD G V + +P+ N + + L+ L A A++EA
Sbjct: 119 MQYSVLNGDSETGVSIMYVTARLDAGDVIHAKSIPLDENASYGEVHDLLAELGAEALIEA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D LE PQ E +T+A ISK E +++ A VHN IR LSP PGA +
Sbjct: 179 LDLLESGRAVRIPQDETKVTFAPSISKEECVIDWTLPATVVHNRIRGLSPIPGANTRLPD 238
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
G + +K+ +++ V G+ G+PG V+ + GAV I+ + G R +
Sbjct: 239 G---KLLKIYKAEKVSGDYSGEPGMVVDVIKKKGPVVMTGDGAVCILSAKPEGKREMPGF 295
Query: 296 DFLLGCPVIIGCIV 309
+ + G + +G +
Sbjct: 296 EIVNGHYLKVGDRL 309
>gi|150016030|ref|YP_001308284.1| methionyl-tRNA formyltransferase [Clostridium beijerinckii NCIMB
8052]
gi|189044505|sp|A6LSJ8|FMT_CLOB8 RecName: Full=Methionyl-tRNA formyltransferase
gi|149902495|gb|ABR33328.1| methionyl-tRNA formyltransferase [Clostridium beijerinckii NCIMB
8052]
Length = 308
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 92/314 (29%), Positives = 165/314 (52%), Gaps = 14/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT +FAV +LQ ++ +++ ++ TQP +P G RG K SAV ++ + +P
Sbjct: 1 MNIVFMGTPDFAVPSLQRMIK-EYNVTAILTQPDKPKG-RGKKMAYSAVKEEGLKHEIPI 58
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + D +VVA+G ++ + +L+ K G N HASLLP +RGAA
Sbjct: 59 YQPIKLKDDRDLIEKLKELKPDFIIVVAFGQILTKEVLDIPKYGCINLHASLLPMYRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ AI+ G+ +G M MD LDTG + +V I++N+ T L L V A +V+
Sbjct: 119 PLNWAIINGEKSSGNTTMLMDVGLDTGDMILKDEVEITNNMTTGELHDILMVRGADLLVK 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+++ + + ++ Q +++ +SAE +HN +R L+P+P A+ +
Sbjct: 179 SIEGISKGDIVPEKQGNETFYAKMLDKNIAN-IDWNKSAEEIHNLVRGLNPWPIAYTDYK 237
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ER+K+ E+++++ +PG +I ++C + + I R+Q G+ L I
Sbjct: 238 ----NERMKIYETEVLKEKSNKEPGTIIDVSKNGVKVSCKEDVLLIKRVQFPNGKPLTIE 293
Query: 296 DFLLGCPVIIGCIV 309
++ G + I+
Sbjct: 294 QYINGHEIEENIIL 307
>gi|298370616|ref|ZP_06981931.1| methionyl-tRNA formyltransferase [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281226|gb|EFI22716.1| methionyl-tRNA formyltransferase [Neisseria sp. oral taxon 014 str.
F0314]
Length = 308
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 123/313 (39%), Positives = 174/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ S V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKG-RGMQLAPSPVKQAALELGLHV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + +ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 AQPEKLRNNAEALQMLKGVDADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L L A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMSLGAAAIVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+SK E R+N+ SA + IRA +P P AW+E
Sbjct: 180 DLQQLKTEGRLKSVKQPEEGVTYAQKLSKEEARINWNESAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ ++ V +G+ GEV++ +AC + A++I LQ +G + +DI
Sbjct: 240 QG----KPMKIWRAEAVAQQGRAGEVLSCSADGLVVACGENALKITELQPSGSKRMDIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G V G ++
Sbjct: 296 FAAGHTVEAGTVL 308
>gi|221201859|ref|ZP_03574896.1| methionyl-tRNA formyltransferase [Burkholderia multivorans CGD2M]
gi|221207635|ref|ZP_03580643.1| methionyl-tRNA formyltransferase [Burkholderia multivorans CGD2]
gi|221172481|gb|EEE04920.1| methionyl-tRNA formyltransferase [Burkholderia multivorans CGD2]
gi|221178279|gb|EEE10689.1| methionyl-tRNA formyltransferase [Burkholderia multivorans CGD2M]
Length = 327
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 124/323 (38%), Positives = 176/323 (54%), Gaps = 20/323 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLRV+F GT EFA A L A+ + ++ V TQP RPAG RG+K SAV + A E LP
Sbjct: 4 TLRVIFAGTPEFAAAALAAIHDAGFAVPLVLTQPDRPAG-RGMKLQASAVKRYALEHGLP 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAVEAIELLRATPHDVMVVAAYGLLLPQEVLDIPRHGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + + I+ + TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMIQASRSAIAPDDTTATLHDRLAA 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V+A+ +LE++ +PQ +G+TYAEKI K E +++ + A+ + +RA P
Sbjct: 183 DGAQLIVDALARLERDGTLAATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEG--KPGEVIN---PNFTIACSQGAVRIMRLQR 286
FPG + K+ ++ G G PG ++ +AC GA+R+ +LQ+
Sbjct: 243 FPGGVATLDGAAI----KIWAAEPATGRGDAAPGTIVEAAPDGVIVACGTGALRVTQLQK 298
Query: 287 AGGRVLDIGDFLLGCPVIIGCIV 309
GG+ L +FL G P+ G
Sbjct: 299 PGGKRLPAREFLAGSPLAAGQRF 321
>gi|304388912|ref|ZP_07370959.1| methionyl-tRNA formyltransferase [Neisseria meningitidis ATCC
13091]
gi|304337046|gb|EFM03233.1| methionyl-tRNA formyltransferase [Neisseria meningitidis ATCC
13091]
Length = 338
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 121/314 (38%), Positives = 172/314 (54%), Gaps = 11/314 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 30 AMKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLR 88
Query: 62 ALVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGA
Sbjct: 89 VEQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGA 148
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 149 APIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVV 208
Query: 180 EAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ +L+ Q E G+TYA+K+SK E R+++ SA + IRA +P P AW+E
Sbjct: 209 ADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAAWVE 268
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 269 YQG----KPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGENALKITELQPAGGRRMNIA 324
Query: 296 DFLLGCPVIIGCIV 309
F G + G +
Sbjct: 325 AFAAGRHIEAGTKL 338
>gi|300692917|ref|YP_003753912.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Ralstonia solanacearum PSI07]
gi|299079977|emb|CBJ52654.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Ralstonia solanacearum PSI07]
Length = 327
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 125/325 (38%), Positives = 173/325 (53%), Gaps = 22/325 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL- 60
TLRV F GT EFA L A+ + +V+V +QP RPAG RG+ S V + A L
Sbjct: 4 TLRVAFAGTPEFAQIALAAIHQAGLPVVAVLSQPDRPAG-RGMHLQASPVKQYAVSHGLG 62
Query: 61 PALV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
P L + E + DV VV AYGL++PQ +L+ + G N HAS
Sbjct: 63 PILQPPSLRRTGKYPQEAAAAIEALSAQRPDVMVVAAYGLILPQEVLDLPRFGCINIHAS 122
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLPRWRGAAPI RAI AGD ETGI +M+MD LDTG + M VPI T L L+
Sbjct: 123 LLPRWRGAAPIHRAIEAGDAETGITLMQMDAGLDTGDMIAMEHVPIGLTDTTGTLHDTLA 182
Query: 172 VLCAHAMVEAMDK-LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
L +VEA+ + + LP +PQ G+TYAEKI+K E +++ R + + + A +
Sbjct: 183 ALGGRMVVEALARLTQHGGLPATPQPAEGVTYAEKIAKEEAALDWSRQSAALLRQVHAFN 242
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLVE---GEGKPGEVIN---PNFTIACSQGAVRIMRL 284
PFPGA E+ +K +++ + + +PG V+ IAC GA+R+ +L
Sbjct: 243 PFPGASAEL----DGVALKFWQAEALPDRPADAQPGTVLAADADGVVIACGAGALRVTQL 298
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
Q+ GG+ L +FL G P+ G
Sbjct: 299 QKPGGKRLPAREFLQGLPIRSGQRF 323
>gi|54025578|ref|YP_119820.1| methionyl-tRNA formyltransferase [Nocardia farcinica IFM 10152]
gi|73919410|sp|Q5YTN5|FMT_NOCFA RecName: Full=Methionyl-tRNA formyltransferase
gi|54017086|dbj|BAD58456.1| putative methionyl-tRNA formyltransferase [Nocardia farcinica IFM
10152]
Length = 307
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 102/310 (32%), Positives = 160/310 (51%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E AV +L+ L++S H +V+V T+P AG RG K S + A E +P
Sbjct: 1 MRLVFAGTPEPAVPSLRRLIASPRHEVVAVVTRPDAVAG-RGRKITRSPIAALADEHGIP 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + E+ ++ D VVAYG ++PQ L+ + G+ N H SLLP WRGAA
Sbjct: 60 VLSPRTPAEPEFLDRLTELAPDCCPVVAYGALLPQAALDIPRHGWINLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AG+ TG +++ LD+GPV + I L + L+ A +
Sbjct: 120 PVQAAINAGEEITGATTFQIEAGLDSGPVYGVVTEKIDVTDTAGTLLERLAETGARLLET 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D +E L PQ G++YA K++ + R+ + + A V+ IRA++P PGAW +
Sbjct: 180 TLDGVEDGTLQAVPQPTEGVSYAPKVTPEDGRIRWDQPALAVNRRIRAVTPAPGAWTLVG 239
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
R+KL +LVE + EV + + AVR+ ++Q G +++ D+
Sbjct: 240 GN----RLKLGPVELVEEQLPERVIEVRKSGVFVGTATTAVRLDKVQPQGKKMMPALDWA 295
Query: 299 LGCPVIIGCI 308
G + G +
Sbjct: 296 RGARLQPGAV 305
>gi|295134368|ref|YP_003585044.1| methionyl-tRNA formyltransferase [Zunongwangia profunda SM-A87]
gi|294982383|gb|ADF52848.1| methionyl-tRNA formyltransferase [Zunongwangia profunda SM-A87]
Length = 306
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 85/302 (28%), Positives = 148/302 (49%), Gaps = 7/302 (2%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +FAV L ++ + +++V V T P +PAG RG K SAV K A LP L PT
Sbjct: 1 MGTPDFAVEGLAKIIEAGYNVVGVVTAPDKPAG-RGRKLNQSAVKKFALTKDLPVLQPTN 59
Query: 68 LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127
L +++E L VV ++P ++ G +N HAS+LP +RGAAPI A++
Sbjct: 60 LKSDDFETQLKSLKPNLQVVVAFRMLPTKVWKFPAYGTFNLHASILPEYRGAAPINWAVI 119
Query: 128 AGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQ 187
G+ TG+ +D +DTG + +++ I + N + L L +V+ + +E
Sbjct: 120 NGEKTTGVTTFFIDDKIDTGNIIQSKEIEIEATENVGSVHDRLMKLGGELIVDTLKLIEI 179
Query: 188 NNLPLSPQIENGITYAEKI-SKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ PQ + ++ T++++ + ++N IR L+P+P AW ++
Sbjct: 180 GEVRTIPQNKEEDPKPAPKLTRENTKIDWSKDTITIYNLIRGLNPYPAAWCYFQ-NDEKL 238
Query: 247 RIKLLESQLV--EGEGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+K+ + ++ + + K G+ V +A G + I +Q G R +++ D L G
Sbjct: 239 NVKIFDCEIALKDHKEKVGKLSVEKHQIKVATKDGYILINEIQLPGKRKMNVKDLLNGLT 298
Query: 303 VI 304
V
Sbjct: 299 VE 300
>gi|254671148|emb|CBA08203.1| Methionyl-tRNA formyltransferase [Neisseria meningitidis alpha153]
gi|325143272|gb|EGC65610.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 961-5945]
gi|325197400|gb|ADY92856.1| methionyl-tRNA formyltransferase [Neisseria meningitidis G2136]
Length = 308
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 120/313 (38%), Positives = 171/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 EQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDAGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+ K E R+++ SA + IRA +P P AW+E
Sbjct: 180 DLQQLQSKGRLNAVKQPEEGVTYAQKLRKEEARIDWSESAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 240 QG----KPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGENALKITELQPAGGRRMNIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G + G +
Sbjct: 296 FAAGRHIEAGTKL 308
>gi|298384886|ref|ZP_06994445.1| methionyl-tRNA formyltransferase [Bacteroides sp. 1_1_14]
gi|298262030|gb|EFI04895.1| methionyl-tRNA formyltransferase [Bacteroides sp. 1_1_14]
Length = 322
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 105/319 (32%), Positives = 164/319 (51%), Gaps = 14/319 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV L+ LV +++V V T P +PAG RG K S V + A E
Sbjct: 1 MKKEDLRIVYMGTPDFAVEALRQLVEGGYNVVGVITMPDKPAG-RGHKIQYSPVKQYALE 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+LP L P KL E + Q L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 60 QNLPLLQPEKLKDEAFVQALREWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V +VPI+ N + +L +L
Sbjct: 120 GAAPINWAVINGDTETGITTFFLQHEIDTGKVIQQVRVPIADTDNVEVVHDKLMILGGKL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
++E +D + + + Q + + A KI K R+++ S + V++ IR LSP+P
Sbjct: 180 VLETVDAILNDTVKPIAQEDMAVVGELRPAPKIFKETCRIDWNSSVKKVYDFIRGLSPYP 239
Query: 234 GAWLEMMIG-NKHERIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQRA 287
AW E++ + +K+ ES+ + + G V+ +A G V ++ LQ
Sbjct: 240 AAWSELVSPEGEAVVMKIFESEKIYEAHQLPVGTVVTDGKKYIKVAVPDGFVSVLSLQLP 299
Query: 288 GGRVLDIGDFLLGCPVIIG 306
G + L + L G + G
Sbjct: 300 GKKRLKTDELLRGFRLSDG 318
>gi|297250812|ref|ZP_06934290.1| methionyl-tRNA formyltransferase [Neisseria polysaccharea ATCC
43768]
gi|296837968|gb|EFH21906.1| methionyl-tRNA formyltransferase [Neisseria polysaccharea ATCC
43768]
Length = 338
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 121/314 (38%), Positives = 172/314 (54%), Gaps = 11/314 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 30 AMKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLR 88
Query: 62 ALVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGA
Sbjct: 89 VEQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGA 148
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 149 APIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIRPTDTANEVHDALMEIGAAAVV 208
Query: 180 EAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ +L+ Q E G+TYA+K+SK E R+++ SA + IRA +P P AW+E
Sbjct: 209 ADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAAWVE 268
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 269 YQG----KPMKIRRAEVVAQQGTAGEVLSCSADGLVVACGENALKITELQPAGGRRMNIA 324
Query: 296 DFLLGCPVIIGCIV 309
F G + G +
Sbjct: 325 AFAAGRHIEAGTKL 338
>gi|260495175|ref|ZP_05815303.1| methionyl-tRNA formyltransferase [Fusobacterium sp. 3_1_33]
gi|260197232|gb|EEW94751.1| methionyl-tRNA formyltransferase [Fusobacterium sp. 3_1_33]
Length = 310
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 83/315 (26%), Positives = 159/315 (50%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT FA+ +L+ + H +++V+T+ +P RG K S + + A +L
Sbjct: 1 MRIIFMGTPMFALPSLEKIYK-EHEVIAVFTKADKP-NARGKKINYSPIKEFALANNLRI 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E E+ + D+ VVVAYG ++P+ +L+ K G N H+SLLPR+RGAAP
Sbjct: 59 YQPETFKDEALIEEIKNMQPDLIVVVAYGKILPKEVLDIPKYGIINLHSSLLPRFRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD ++G++IM +++ LD G V + I+ L L + A +++A
Sbjct: 119 INAAIINGDKKSGVSIMYVEEELDAGDVILQEETEITDEDTFLSLHDRLKDIGADLLLKA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ Q E +T+ + K + ++++ +++ + N IR ++P P A+ +
Sbjct: 179 IKLIEKGEAKAQKQDEGLVTFVKPFKKEDCKIDWTKTSRGIFNFIRGMNPVPTAFSNLNG 238
Query: 242 GNKHERIKLLESQLVE---GEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDI 294
IK+ E+++ + GE++ + + G++ I + + +
Sbjct: 239 T----IIKIYETKINDKVYNNATCGEIVEYLKGKGIIVKTADGSLIITSAKPENKKQMSG 294
Query: 295 GDFLLGCPVIIGCIV 309
D + G + IG +
Sbjct: 295 VDLINGKFLKIGEKL 309
>gi|212550517|ref|YP_002308834.1| methionyl-tRNA formyltransferase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|229487437|sp|B6YQF1|FMT_AZOPC RecName: Full=Methionyl-tRNA formyltransferase
gi|212548755|dbj|BAG83423.1| methionyl-tRNA formyltransferase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 324
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 92/310 (29%), Positives = 153/310 (49%), Gaps = 12/310 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R+VFMGT +FAVA+L AL+ +++V V T P + G+ S + + A +P L
Sbjct: 7 RIVFMGTPDFAVASLDALIGEGYNVVGVVTIPDKSIGKHQSIPQFSPIKQYALSHEIPLL 66
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P KL ++ + L VV ++P+ + N LG +N HASLLP++RGAAPI
Sbjct: 67 QPKKLKDPDFLKSLKAWNTDLQVVVSFRLLPEVVWNMPSLGTFNLHASLLPQYRGAAPIN 126
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
AI+ G+ ETG+ +D +DTG + +PI N + EL L A +V+ +
Sbjct: 127 WAIINGEKETGVTTFFLDYEIDTGKIIAQECIPIKETDNAGTIHDELMYLGAKLVVKTTN 186
Query: 184 KLEQNNLPLSPQIENGITYA-----EKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + L Q E + KI + ++++ ++ +HN IR LSP+PGAW E
Sbjct: 187 DILSGTVKLISQDETNLGKQKLKIAPKIFREVCKIDWNKTTREIHNFIRGLSPYPGAWTE 246
Query: 239 MM-IGNKHERIKLLESQLVEG---EGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRV 291
+ + K+ E++ + G +++ + G +R+ +Q AG +
Sbjct: 247 LTCVKGMTFPFKIFETEKADCHDYSLPVGTIVSDKKVYIDVRTKDGFIRLRNVQLAGKKR 306
Query: 292 LDIGDFLLGC 301
+ + DFL G
Sbjct: 307 MPVTDFLKGN 316
>gi|261391649|emb|CAX49097.1| methionyl-tRNA formyltransferase [Neisseria meningitidis 8013]
Length = 308
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 120/313 (38%), Positives = 171/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 EQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDAGLDTGDVVSEHRYAIRPTDTANEVHDALMEIGAAAVVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+ K E R+++ SA + IRA +P P AW+E
Sbjct: 180 DLQQLQSKGRLNAVKQPEEGVTYAQKLRKEEARIDWSESAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 240 QG----KPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGENALKITELQPAGGRRMNIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G + G +
Sbjct: 296 FAAGRHIEAGTKL 308
>gi|325145433|gb|EGC67709.1| methionyl-tRNA formyltransferase [Neisseria meningitidis
M01-240013]
Length = 308
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 121/313 (38%), Positives = 172/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 EQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+SK E R+++ SA + IRA +P P AW+E
Sbjct: 180 DLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 240 QG----KPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGENALKITELQPAGGRRMNIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G + G +
Sbjct: 296 FAAGRHIEAGTKL 308
>gi|86606347|ref|YP_475110.1| methionyl-tRNA formyltransferase [Synechococcus sp. JA-3-3Ab]
gi|123765590|sp|Q2JTY2|FMT_SYNJA RecName: Full=Methionyl-tRNA formyltransferase
gi|86554889|gb|ABC99847.1| methionyl-tRNA formyltransferase [Synechococcus sp. JA-3-3Ab]
Length = 322
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 113/323 (34%), Positives = 162/323 (50%), Gaps = 23/323 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVS--SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+RVVF GT EFA+ +LQ L+ S +V + QP RP G RG K + AQ +
Sbjct: 1 MRVVFFGTPEFALPSLQILLQPQSPFEVVGLVCQPDRPQG-RGQKVLPPPTKILAQAHGI 59
Query: 61 PALVPTK--LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
P P + E + ADV VVVAYG ++P +L KLG N HASLLP +RG
Sbjct: 60 PVWQPGRLRRDPEVLAALEALAADVFVVVAYGQILPPAVLQMPKLGCINVHASLLPAYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQ AI G+ ETG+ M MD+ +DTG + K+PI L +L+ A +
Sbjct: 120 AAPIQWAIANGETETGVTTMLMDEGMDTGAILLQAKLPIEPEQTGLELASQLAQRGAELL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
VE + KLE+ L PQ ++ TYA + K + ++++ R A+ +HN IRA SP
Sbjct: 180 VETLVKLEKGELTPIPQDDSRATYAPLLKKQDFQLDWQRPAQALHNQIRAFSPDC----- 234
Query: 239 MMIGNKHERIKLLESQLVEGE--------GKPGEVIN----PNFTIACSQGAVRIMRLQR 286
G + +RIK++ S + G PGEV+ +A +G++ I R Q
Sbjct: 235 -FTGLQGQRIKIVRSAAPQLHPPPAELPPGSPGEVVGLARGEGVYVATGEGSLLIRRAQL 293
Query: 287 AGGRVLDIGDFLLGCPVIIGCIV 309
G + D + G + +G
Sbjct: 294 PGRKEQSACDLVNGGQLRVGMRF 316
>gi|167765262|ref|ZP_02437375.1| hypothetical protein BACSTE_03650 [Bacteroides stercoris ATCC
43183]
gi|167696890|gb|EDS13469.1| hypothetical protein BACSTE_03650 [Bacteroides stercoris ATCC
43183]
Length = 324
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 105/317 (33%), Positives = 161/317 (50%), Gaps = 14/317 (4%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT EFAV L+ LV ++IV V T P +PAG RG K S V + A E
Sbjct: 3 MKKEDLRIVYMGTPEFAVEPLRCLVEGGYNIVGVITMPDKPAG-RGHKVQFSPVKQYALE 61
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P +L E + + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 62 HDLPLLQPERLKDEAFVEALRAWNADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 121
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V +VPI+ N + +L +L
Sbjct: 122 GAAPINWAVINGDTETGITTFFLKHEIDTGEVIQQVRVPIADTDNVGIVHDKLMMLGGRL 181
Query: 178 MVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ E +D + + + PQ E + A KI K R+++ + + +++ IR LSP+P
Sbjct: 182 VTETVDAILADTVKSVPQEEMAVVGELRPAPKIFKDTCRIDWNQPVKRIYDFIRGLSPYP 241
Query: 234 GAWLEM-MIGNKHERIKLLESQLVE--GEGKPGEVINPN---FTIACSQGAVRIMRLQRA 287
AW E+ +K+ E++ +E E PG + IA + G + + LQ
Sbjct: 242 AAWTELVQSDGTAVVLKIFETEKIEHLHESAPGTLQTDGKTYIRIAGTDGWIGVRALQLP 301
Query: 288 GGRVLDIGDFLLGCPVI 304
G + L + L G +
Sbjct: 302 GKKRLKTDELLRGFKLT 318
>gi|78049481|ref|YP_365656.1| methionyl-tRNA formyltransferase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|123757342|sp|Q3BNK7|FMT_XANC5 RecName: Full=Methionyl-tRNA formyltransferase
gi|78037911|emb|CAJ25656.1| methionyl-tRNA formyltransferase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 307
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 168/305 (55%), Gaps = 9/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT +FAV +L+A + H +V+VYTQP RPAG RG S V +A +P
Sbjct: 1 MRIIFAGTPDFAVPSLRA-AAQRHEVVAVYTQPDRPAG-RGRGLTPSPVKLEAVARGIPV 58
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E +AD+ VVVAYGL++P+ +L A G +N HASLLPRWRGAAP
Sbjct: 59 FQPQTLRSPEALATVRKLDADLMVVVAYGLILPKAVLAAPTHGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETG+ +M+M+ LDTGPV +++ I L L+ L A + +
Sbjct: 119 IQRAIEAGDTETGVCLMQMEAGLDTGPVLLSQRIEIGEQETGGQLHDRLAALGAQVLSDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ ++G+TYA K+ K + R+++ + A+ + +RA +P+P E +
Sbjct: 179 LGLLRAGIRPVAQPQPDDGVTYAHKLDKAQARLDWAQPAQELARRVRAFNPWPV--AEAI 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + R+ + + + PG ++ IAC +GA+R+ LQR GG+ + D+
Sbjct: 237 LAGERVRLHGAVALELAHQHPPGTLLAASKQGIDIACGEGALRVRVLQREGGKAITAADY 296
Query: 298 LLGCP 302
L
Sbjct: 297 LNARR 301
>gi|46199965|ref|YP_005632.1| methionyl-tRNA formyltransferase [Thermus thermophilus HB27]
gi|1169713|sp|P43523|FMT_THETH RecName: Full=Methionyl-tRNA formyltransferase
gi|73919423|sp|Q72H32|FMT_THET2 RecName: Full=Methionyl-tRNA formyltransferase
gi|1072951|pir||B55228 methionyl-tRNA formyltransferase (EC 2.1.2.9) - Thermus aquaticus
gi|602915|emb|CAA55696.1| methionyl-tRNA formyltransferase [Thermus thermophilus]
gi|46197592|gb|AAS82005.1| methionyl-tRNA formyltransferase [Thermus thermophilus HB27]
Length = 305
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 102/312 (32%), Positives = 155/312 (49%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV F GT +AV L AL H +V V +QP +P G RGL+ S V + A+ LP
Sbjct: 1 MRVAFFGTPLWAVPVLDALRKR-HQVVLVVSQPDKPQG-RGLRPAPSPVARYAEAEGLPL 58
Query: 63 -LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ E +VAVV AYG +IP+ L+ GF N H SLLP++RGAAP
Sbjct: 59 LRPARLREEAFLEALRQAAPEVAVVAAYGKLIPKEALDIPPHGFLNLHPSLLPKYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRA++AG+ ETG++IM++D+ LDTGP+ + + PI + + L L ++E
Sbjct: 119 VQRALLAGERETGVSIMRLDEGLDTGPLYAVWRTPILPDEDAVALGNRLRDKGVELLLE- 177
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
L PQ E R++F SAE ++ RA+ P+PG++
Sbjct: 178 -VLERLPELTPRPQEGEVSYAPPLSK-EEGRLDFGESAEALYRRHRAVQPWPGSYFF--- 232
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
++ R+K L + GEG+PG V + + G + ++ +Q G R + D+
Sbjct: 233 -HRGRRVKALRLRPEPGEGEPGVVARVGPEGVAVGTASGLLLLLEVQPEGRRAMPAADWA 291
Query: 299 LGCPVIIGCIVG 310
G V G +G
Sbjct: 292 RGYGVAPGTRLG 303
>gi|121633989|ref|YP_974234.1| methionyl-tRNA formyltransferase [Neisseria meningitidis FAM18]
gi|166215489|sp|A1KRE6|FMT_NEIMF RecName: Full=Methionyl-tRNA formyltransferase
gi|120865695|emb|CAM09422.1| methionyl-tRNA formyltransferase [Neisseria meningitidis FAM18]
gi|308388329|gb|ADO30649.1| methionyl-tRNA formyltransferase [Neisseria meningitidis alpha710]
gi|325131146|gb|EGC53867.1| methionyl-tRNA formyltransferase [Neisseria meningitidis
OX99.30304]
gi|325133178|gb|EGC55849.1| methionyl-tRNA formyltransferase [Neisseria meningitidis M6190]
gi|325137170|gb|EGC59765.1| methionyl-tRNA formyltransferase [Neisseria meningitidis M0579]
gi|325138790|gb|EGC61342.1| methionyl-tRNA formyltransferase [Neisseria meningitidis ES14902]
gi|325203054|gb|ADY98508.1| methionyl-tRNA formyltransferase [Neisseria meningitidis
M01-240149]
gi|325207148|gb|ADZ02600.1| methionyl-tRNA formyltransferase [Neisseria meningitidis NZ-05/33]
Length = 308
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 121/313 (38%), Positives = 172/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 AQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+SK E R+++ SA + IRA +P P AW+E
Sbjct: 180 DLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 240 QG----KPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGENALKITELQPAGGRRMNIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G + G +
Sbjct: 296 FAAGRHIEAGTKL 308
>gi|256027462|ref|ZP_05441296.1| methionyl-tRNA formyltransferase [Fusobacterium sp. D11]
gi|289765424|ref|ZP_06524802.1| methionyl-tRNA formyltransferase [Fusobacterium sp. D11]
gi|289716979|gb|EFD80991.1| methionyl-tRNA formyltransferase [Fusobacterium sp. D11]
Length = 310
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 83/315 (26%), Positives = 161/315 (51%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT FA+ +L+ + H +++V+T+ +P RG K S + + A +L
Sbjct: 1 MRIIFMGTPMFALPSLEKIYK-EHEVIAVFTKADKP-NARGKKINYSPIKEFALANNLRI 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E E+ + D+ VVVAYG ++P+ +L+ K G N H+SLLPR+RGAAP
Sbjct: 59 YQPETFKDEALIEEIKNMQPDLIVVVAYGKILPKEVLDIPKYGIINLHSSLLPRFRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD ++G++IM +++ LD G V + I+ L L + A +++A
Sbjct: 119 INAAIINGDKKSGVSIMYVEEELDAGDVILQEETEITDEDTFLSLHDRLKDIGADLLLKA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ +E+ Q +N +T+ + K + ++++ +++ + N IR ++P P A+ +
Sbjct: 179 IELIEKEEAKAQKQDKNLVTFVKPFKKEDCKIDWAKTSREIFNFIRGMNPVPTAFSNL-- 236
Query: 242 GNKHERIKLLESQLVE---GEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDI 294
IK+ E+++ + GE++ + + G++ I + + +
Sbjct: 237 --NGIVIKIYETKINDKVYNNATCGEIVEYLKGKGIVVKTADGSLIITSAKPENKKQMSG 294
Query: 295 GDFLLGCPVIIGCIV 309
D + G + IG +
Sbjct: 295 VDLINGKFLKIGEKL 309
>gi|237743928|ref|ZP_04574409.1| methionyl-tRNA formyltransferase [Fusobacterium sp. 7_1]
gi|229432959|gb|EEO43171.1| methionyl-tRNA formyltransferase [Fusobacterium sp. 7_1]
Length = 310
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 83/315 (26%), Positives = 160/315 (50%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT FA+ +L+ + H +++V+T+ +P RG K S + + A +L
Sbjct: 1 MRIIFMGTPMFALPSLEKIYK-EHEVIAVFTKADKP-NARGKKINYSPIKEFALANNLRI 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E E+ + D+ VVVAYG ++P+ +L+ K G N H+SLLPR+RGAAP
Sbjct: 59 YQPETFKDEALIEEIKNMQPDLIVVVAYGKILPKEVLDIPKYGIINLHSSLLPRFRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD ++G++IM +++ LD G V + I+ L L + A +++A
Sbjct: 119 INAAIINGDKKSGVSIMYVEEELDAGDVILQEETEITDEDTFLSLHDRLKDIGADLLLKA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ +E+ Q +N +T+ + K + ++++ + + + N IR ++P P A+ +
Sbjct: 179 IELIEKGEAKAKKQDKNLVTFVKPFKKEDCKIDWTKKSREIFNFIRGMNPVPTAFSNLNG 238
Query: 242 GNKHERIKLLESQLVE---GEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDI 294
IK+ E+++ + GE++ + + G++ I + + +
Sbjct: 239 T----IIKIYETKINDKVYNNATCGEIVEYLKGKGIIVKTADGSLIITSAKPENKKQMSG 294
Query: 295 GDFLLGCPVIIGCIV 309
D + G + IG +
Sbjct: 295 VDLINGKFLKIGEKL 309
>gi|218767201|ref|YP_002341713.1| methionyl-tRNA formyltransferase [Neisseria meningitidis Z2491]
gi|21542059|sp|Q9JWY9|FMT_NEIMA RecName: Full=Methionyl-tRNA formyltransferase
gi|121051209|emb|CAM07480.1| methionyl-tRNA formyltransferase [Neisseria meningitidis Z2491]
gi|319411406|emb|CBY91817.1| methionyl-tRNA formyltransferase [Neisseria meningitidis WUE 2594]
Length = 308
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 121/313 (38%), Positives = 173/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 EQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+SK E R+++ +SA + IRA +P P AW+E
Sbjct: 180 DLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSKSAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 240 QG----KPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGENALKITELQPAGGRRMNIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G + G +
Sbjct: 296 FAAGRHIEAGTKL 308
>gi|88811383|ref|ZP_01126638.1| methionyl-tRNA formyltransferase [Nitrococcus mobilis Nb-231]
gi|88791272|gb|EAR22384.1| methionyl-tRNA formyltransferase [Nitrococcus mobilis Nb-231]
Length = 314
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 107/311 (34%), Positives = 149/311 (47%), Gaps = 8/311 (2%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
+VF GT+EFAV LQ L ++ VYTQP RPAG RG + S V AQ ++LP
Sbjct: 7 IVFAGTAEFAVPALQRLSRGPQRVIGVYTQPDRPAG-RGRRLRPSPVKTAAQAYNLPVYQ 65
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P + ++ VV AYGLV+P +L LG N HASLLPRWRGAAPIQ
Sbjct: 66 PQSLRHAAAQAELAELAPELIVVAAYGLVLPPEVLAIPALGCLNIHASLLPRWRGAAPIQ 125
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
RAI AGD TG+ IM MD LDTG + R I ++ + L+ L A + +
Sbjct: 126 RAIAAGDRRTGVTIMCMDAGLDTGAILAQRDCLIQADDTGGSVHDRLAELGAELITATLP 185
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ Q TYA K+ K E +++ R A + IRA +P+P A+ +
Sbjct: 186 HWLAGEIEPQTQNPTEATYAAKLHKEEAVIDWQRPATEIARRIRAFNPWPVAYTQ--HHG 243
Query: 244 KHERIKLLES-QLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ R+ L + G ++ + +A +G +RI LQ G + FL
Sbjct: 244 RILRVWLARALTTTPPLAAAGSIVEAGDAGIDVATGEGLLRIEELQIPGRQRQHAKAFLN 303
Query: 300 GCPVIIGCIVG 310
G P+ +G
Sbjct: 304 GYPLSPHDRLG 314
>gi|186474807|ref|YP_001856277.1| methionyl-tRNA formyltransferase [Burkholderia phymatum STM815]
gi|238691318|sp|B2JJU4|FMT_BURP8 RecName: Full=Methionyl-tRNA formyltransferase
gi|184191266|gb|ACC69231.1| methionyl-tRNA formyltransferase [Burkholderia phymatum STM815]
Length = 327
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 122/326 (37%), Positives = 165/326 (50%), Gaps = 22/326 (6%)
Query: 1 MT--LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M+ LRV+F GT EFA A L A+ + + V TQP RPAG RG+K S V + AQE
Sbjct: 1 MSHTLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASPVKRYAQEH 59
Query: 59 SLPALVPTKLGQEEYEQFLSF---------NADVAVVVAYGLVIPQRILNATKLGFYNGH 109
+ P L + + DV VV AYGL++PQ +L+ G N H
Sbjct: 60 GIEVAQPPSLRRNGKYPAQATAAIEQLRATPHDVMVVAAYGLLLPQEVLDIAPHGCINIH 119
Query: 110 ASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQE 169
ASLLPRWRGAAPI RAI AGD ETGI +M+MD LDTG + + I+ TA L
Sbjct: 120 ASLLPRWRGAAPIHRAIEAGDAETGITLMQMDAGLDTGAMISEVRTAIAGTDTTATLHDR 179
Query: 170 LSVLCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRA 228
L+ A + ++ L PQ G TYAEKI+K E +++ R A + +RA
Sbjct: 180 LAEAGAKLIVDALVELERSGKLASIPQPAAGATYAEKIAKHEAALDWRRPAAELARQVRA 239
Query: 229 LSPFPGAWLEMMIGNKHERIKLLESQLVEGE--GKPGEVIN---PNFTIACSQGAVRIMR 283
PFPG + +KL + V+ +PG ++ +AC GA+RI +
Sbjct: 240 FDPFPGGAATLDGA----VLKLWSAAAVDASCKAEPGTIVEVSPEGVVVACGDGALRITQ 295
Query: 284 LQRAGGRVLDIGDFLLGCPVIIGCIV 309
LQ+ GG+ L + DFL G + G
Sbjct: 296 LQKPGGKRLPVRDFLAGSTLAAGQRF 321
>gi|88658426|ref|YP_507692.1| methionyl-tRNA formyltransferase [Ehrlichia chaffeensis str.
Arkansas]
gi|123736380|sp|Q2GFU1|FMT_EHRCR RecName: Full=Methionyl-tRNA formyltransferase
gi|88599883|gb|ABD45352.1| methionyl-tRNA formyltransferase [Ehrlichia chaffeensis str.
Arkansas]
Length = 303
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 159/308 (51%), Gaps = 16/308 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMG+ EF+V L AL+ H +++VYT+ P+PAGRRG + +H A++ ++
Sbjct: 1 MKIIFMGSPEFSVPALCALLEEKDHEVIAVYTRLPKPAGRRGKVLTKTPIHIIAEQNNIE 60
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E E+ + N DV VVVAYGL+IP+ +L+ K G N H SLLPRWRGAA
Sbjct: 61 VNTPKSLKHDYEQEKIFALNPDVIVVVAYGLIIPEAVLSIPKYGCINIHPSLLPRWRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI++GD +TG+ IM+M++ D G + R +PI N L Q+LS L + ++E
Sbjct: 121 PIHYAILSGDEQTGVTIMQMNELWDEGDILLQRDIPIDEQDNIDTLSQKLSNLGSSMLIE 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ N L P +N + ++ A+ + IRAL P +
Sbjct: 181 ----VLNNIDHLVPIKQNANDATYTNKIIDFHIDCNEEAQVICRKIRALYPKAFLFFN-- 234
Query: 241 IGNKHERIKLLESQLVEG----EGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R+++L++ KPG VIN + I C G + + +Q G I D
Sbjct: 235 ----DKRLRILKANYCPDSDLQNLKPGTVINSHMHIKCKNGVLIPLIVQLEGKNPCSIND 290
Query: 297 FLLGCPVI 304
F+ G +
Sbjct: 291 FIHGYSIS 298
>gi|167579359|ref|ZP_02372233.1| methionyl-tRNA formyltransferase [Burkholderia thailandensis TXDOH]
Length = 328
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 117/321 (36%), Positives = 171/321 (53%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYALEHGIT 62
Query: 62 ALV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
+ + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKHPAEAAAALDLLHATPHDVMVVAAYGLLLPQEVLDLPRYGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + +V I+ + TA L +L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHDARVAIAPDDTTATLHDKLAA 182
Query: 173 LCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A + ++ L +PQ ++GITYAEKI K E +++ + A + +RA P
Sbjct: 183 AGATLIVDALVELERAGALDATPQPDDGITYAEKIGKHEAALDWRKPATVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ ++ G+ PG +++ IAC +GA+R+ +LQ+ G
Sbjct: 243 FPGGAGTL--DGVTLKLWAADAMPARGDAAPGTIVDAGADGVVIACGEGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ +G
Sbjct: 301 GKRLPAREFLAGAPLAVGQCF 321
>gi|313667407|ref|YP_004047691.1| methionyl-tRNA formyltransferase [Neisseria lactamica ST-640]
gi|313004869|emb|CBN86295.1| methionyl-tRNA formyltransferase [Neisseria lactamica 020-06]
Length = 308
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 121/313 (38%), Positives = 173/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 AQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+SK E R+++ +SA + IRA +P P AW+E
Sbjct: 180 DLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSKSAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 240 QG----KPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGENALKITELQPAGGRRMNIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G + G +
Sbjct: 296 FAAGRHIEAGTKL 308
>gi|167834979|ref|ZP_02461862.1| methionyl-tRNA formyltransferase [Burkholderia thailandensis
MSMB43]
Length = 327
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYALEHGIA 62
Query: 62 ALV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
+ + DV VV AYGL++PQ +L + G N HASL
Sbjct: 63 LAQPPSLRRAGKYPAEAAAALDLLHATPHDVMVVAAYGLLLPQEVLGLPRHGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + ++ I+ + TA L +L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHDARIAIAPDDTTATLHDKLAA 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V+A+ +LE+ +PQ +G+TYAEKI K E +++ + AE + +RA P
Sbjct: 183 AGARLIVDALAELERAGSLAATPQPADGVTYAEKIGKHEAALDWRKPAEVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ ++ G+ PG +++ IAC +GA+R+ +LQ+ G
Sbjct: 243 FPGGAGTL--DGATLKLWAADAVPARGDAAPGTIVDAGPDGIVIACGEGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ G
Sbjct: 301 GKRLPAREFLAGAPLAAGQRF 321
>gi|166368027|ref|YP_001660300.1| methionyl-tRNA formyltransferase [Microcystis aeruginosa NIES-843]
gi|189044518|sp|B0JY70|FMT_MICAN RecName: Full=Methionyl-tRNA formyltransferase
gi|166090400|dbj|BAG05108.1| methionyl-tRNA formyltransferase [Microcystis aeruginosa NIES-843]
Length = 325
Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats.
Identities = 95/324 (29%), Positives = 155/324 (47%), Gaps = 18/324 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT FAV TL+ L+++ I++V TQP + G RG + + S V + A E +P
Sbjct: 1 MRIVFFGTPTFAVPTLKKLLANPDIEIITVVTQPDKRRG-RGNQLIPSPVKQIAIEQQIP 59
Query: 62 ALVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K + AD VVVAYG ++ IL +LG N H S+LP++RGA
Sbjct: 60 VLQPKSVKKNARTLDFLRQSRADAFVVVAYGQILSPEILEMPRLGCINVHGSILPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+Q I G+ ETGI M MD +DTGP+ PI+ N + L + A ++
Sbjct: 120 APVQWCIARGEKETGITTMLMDAGMDTGPMLLKAYTPIALFDNAEQVGATLGQMGADLLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL-- 237
E + KL++ + PQ + TYA I K + +++ S +H+ +R P
Sbjct: 180 ETLSKLDRAEITPIPQNNDDATYAPLIQKSDYLIHWQDSGRRIHDRVRGFYPHALTTFRG 239
Query: 238 -------EMMIGNKHERIKLLESQLVEG-EGKPGEVI----NPNFTIACSQGAVRIMRLQ 285
+ + + + L+++ + G+ G ++ N + +G + + +Q
Sbjct: 240 QPLKVMATIPLEDLGQLPPELQTKDLSHLSGEVGSIVALWKNFGPVVQTGEGLLLLKEVQ 299
Query: 286 RAGGRVLDIGDFLLGCPVIIGCIV 309
+G GD + G + IG I
Sbjct: 300 LSGKSPRSGGDLVNGSRLTIGEIF 323
>gi|254805843|ref|YP_003084064.1| Methionyl-tRNA formyltransferase [Neisseria meningitidis alpha14]
gi|254669385|emb|CBA08532.1| Methionyl-tRNA formyltransferase [Neisseria meningitidis alpha14]
Length = 308
Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats.
Identities = 122/313 (38%), Positives = 173/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+A K G N HASLLPRWRGAA
Sbjct: 60 EQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDAPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDAGLDTGDVVSEHRYAIRPTDTANEVHDALMEIGAAAVVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+SK E R+++ SA + IRA +P P AW+E
Sbjct: 180 DLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 240 QG----KPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGENALKITELQPAGGRRMNIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G + G +
Sbjct: 296 FAAGRHIEAGTKL 308
>gi|119475267|ref|ZP_01615620.1| methionyl-tRNA formyltransferase [marine gamma proteobacterium
HTCC2143]
gi|119451470|gb|EAW32703.1| methionyl-tRNA formyltransferase [marine gamma proteobacterium
HTCC2143]
Length = 324
Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats.
Identities = 111/319 (34%), Positives = 171/319 (53%), Gaps = 17/319 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT +FA A L++++ H +V+VY+QP RP+G RG K S V + A E ++P
Sbjct: 5 LRLIFAGTPDFAAAHLKSILEQGKHEVVAVYSQPDRPSG-RGKKLTPSPVKQVALEHNIP 63
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E +Q + NAD+ +V AYGL++P IL G N HASLLPRWRGAA
Sbjct: 64 VFQPLNFKAVEDQQTLKAINADLMIVAAYGLLLPPVILQTPNYGCINVHASLLPRWRGAA 123
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD+E+G+ IM+MD+ LDTG + I ++ L +L+ L A+ +
Sbjct: 124 PIQRAIEAGDSESGVVIMQMDEGLDTGDMLLTASCNIENSETGGSLLDKLTALGIRALNQ 183
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+D++ ++ + + Q TYA KISK E +N+ ++A + IRA +PFP A+ +
Sbjct: 184 ALDRIAEHQISATAQPRQNTTYAAKISKDELTINWQQAATVIERKIRAFNPFPVAYTNLD 243
Query: 241 IGNKHERIKLLESQLV-----EGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVL 292
RIK+ + +V + G ++ + + C G + + +Q GG+ L
Sbjct: 244 GR----RIKIWLANVVAKDQFDSTQPAGTIVYADRQTIIVNCGDGQLSLQTIQLPGGKAL 299
Query: 293 DIGDFLLGCP--VIIGCIV 309
I + G
Sbjct: 300 PISAVMNSKAEMFAAGTRF 318
>gi|292670258|ref|ZP_06603684.1| methionyl-tRNA formyltransferase [Selenomonas noxia ATCC 43541]
gi|292648210|gb|EFF66182.1| methionyl-tRNA formyltransferase [Selenomonas noxia ATCC 43541]
Length = 312
Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats.
Identities = 94/314 (29%), Positives = 138/314 (43%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH--SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+RVVFMGT +FAV L A+ + + + +V TQP RP G RG + V S V A +
Sbjct: 1 MRVVFMGTPDFAVPVLAAIDARTDLAEVAAVVTQPDRPRG-RGQRLVPSPVKSWAAAHDI 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P + Q + DVAVV A+G ++ Q +L+ G N HASLLP++RGA
Sbjct: 60 PVLQPERARDASFILQLRALAPDVAVVAAFGQILSQEVLDIPVHGCINVHASLLPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ AIM G+ TGI M+M+ LDTG + R+VPI ++ L L A ++
Sbjct: 120 APIQHAIMDGETVTGITTMQMNAGLDTGDMLLRREVPIHADTTYGTLHDVLMETGAELLI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E +++L L PQ + S P + +
Sbjct: 180 ETLERLAAGTLAPVPQ---MGESSYAARITRETAQIDWSKPARELDALVRGLNPTPYAQT 236
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINP----NFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +I L G +++ IA V I +Q G +++
Sbjct: 237 SLDGAVYKIGGLRRTGHAASAPAGTLVSADRRAGLCIAAGDEDVEITEIQAPGKKMMAAS 296
Query: 296 DFLLGCPVIIGCIV 309
FL GC + +G
Sbjct: 297 AFLNGCALTVGTRF 310
>gi|325205204|gb|ADZ00657.1| methionyl-tRNA formyltransferase [Neisseria meningitidis
M04-240196]
Length = 308
Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 123/313 (39%), Positives = 173/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 AQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I S + L L A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQSTDTANEVHDALMNLGAAAVVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+SK E R+++ SA + IRA +P P AW+E
Sbjct: 180 DLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 240 QG----KPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGENALKITELQPAGGRRMNIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G + G +
Sbjct: 296 FAAGRHIEAGTKL 308
>gi|314936622|ref|ZP_07843969.1| methionyl-tRNA formyltransferase [Staphylococcus hominis subsp.
hominis C80]
gi|313655241|gb|EFS18986.1| methionyl-tRNA formyltransferase [Staphylococcus hominis subsp.
hominis C80]
Length = 310
Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 101/316 (31%), Positives = 170/316 (53%), Gaps = 14/316 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A+ + +
Sbjct: 1 MS-KIIFMGTPDFSTKVLEMLI-AEHEVIAVVTQPDRPVG-RKRVLTPPPVKKVAETYHI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E + + N D+ V A+G ++P+ +L KLG N HASLLP++RG
Sbjct: 58 PVYQPEKLKDSNELNELMDLNPDLIVTAAFGQLLPESLLKLPKLGAVNVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ +TGI IM M K LD G + + + I + N + +LS L A +
Sbjct: 118 APIHQAIIDGEVQTGITIMYMVKKLDAGNIISQKAIDIEDDDNVGSMHDKLSFLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ ++ T+A IS+ + R+++ +SA+ +HNHIR LSP+P A+ M
Sbjct: 178 ETLPFIIDGSNESIPQDDSKATFASNISREDERIDWTKSAKEIHNHIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACSQ-GAVRIMRLQRAGGRVLDI 294
N +KL ++ + +G G+PGE+I + A+ + +Q +G + +
Sbjct: 238 NNKN----LKLYQAHIEKGKNGEPGEIIEITKTAIIVGTGSLDAIALTDIQLSGKKRMLA 293
Query: 295 GDFLLGCPVI-IGCIV 309
+L G +G +
Sbjct: 294 AQYLSGVQDSLVGTKL 309
>gi|19704821|ref|NP_604383.1| methionyl-tRNA formyltransferase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19715167|gb|AAL95683.1| Methionyl-tRNA formyltransferase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 317
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 86/315 (27%), Positives = 161/315 (51%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT FAV +L+ + H I+SV+T+ +P RG K S + + A +L
Sbjct: 8 MKIIFMGTPTFAVPSLEKIYK-EHEIISVFTKVDKP-NARGKKINYSPIKEFALANNLKI 65
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E+ + AD+ VVVAYG ++P+ +++ K G N H+SLLPR+RGAAP
Sbjct: 66 YQPENFKDNTLIEEIRNMQADLIVVVAYGKILPKEVIDIPKYGVINLHSSLLPRFRGAAP 125
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD ++GI+IM +++ LD G V + IS L L + A +++A
Sbjct: 126 INAAIINGDTKSGISIMYVEEELDAGDVILQEETEISDEDTFLSLHDRLKDMGADLLLKA 185
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ +++ + Q + +T+ + K + ++++ +++ + N IR ++P P A+ +
Sbjct: 186 IELIKKGEVKAQKQDKKLVTFVKPFRKEDCKIDWTKTSREIFNFIRGMNPIPTAFSNLNG 245
Query: 242 GNKHERIKLLESQLVE---GEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDI 294
IK+ E+++ + GEV+ + S G++ I + + +
Sbjct: 246 T----IIKIYETKINDKVYNNATCGEVVEYLKGKGIVVKTSDGSLIISSAKPENKKQMSG 301
Query: 295 GDFLLGCPVIIGCIV 309
D + G + IG +
Sbjct: 302 VDLINGKFLKIGEKL 316
>gi|33518620|sp|Q8RDM3|FMT_FUSNN RecName: Full=Methionyl-tRNA formyltransferase
Length = 310
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 86/315 (27%), Positives = 161/315 (51%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT FAV +L+ + H I+SV+T+ +P RG K S + + A +L
Sbjct: 1 MKIIFMGTPTFAVPSLEKIYK-EHEIISVFTKVDKP-NARGKKINYSPIKEFALANNLKI 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E+ + AD+ VVVAYG ++P+ +++ K G N H+SLLPR+RGAAP
Sbjct: 59 YQPENFKDNTLIEEIRNMQADLIVVVAYGKILPKEVIDIPKYGVINLHSSLLPRFRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD ++GI+IM +++ LD G V + IS L L + A +++A
Sbjct: 119 INAAIINGDTKSGISIMYVEEELDAGDVILQEETEISDEDTFLSLHDRLKDMGADLLLKA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ +++ + Q + +T+ + K + ++++ +++ + N IR ++P P A+ +
Sbjct: 179 IELIKKGEVKAQKQDKKLVTFVKPFRKEDCKIDWTKTSREIFNFIRGMNPIPTAFSNLNG 238
Query: 242 GNKHERIKLLESQLVE---GEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDI 294
IK+ E+++ + GEV+ + S G++ I + + +
Sbjct: 239 T----IIKIYETKINDKVYNNATCGEVVEYLKGKGIVVKTSDGSLIISSAKPENKKQMSG 294
Query: 295 GDFLLGCPVIIGCIV 309
D + G + IG +
Sbjct: 295 VDLINGKFLKIGEKL 309
>gi|194367356|ref|YP_002029966.1| methionyl-tRNA formyltransferase [Stenotrophomonas maltophilia
R551-3]
gi|238693438|sp|B4SKH6|FMT_STRM5 RecName: Full=Methionyl-tRNA formyltransferase
gi|194350160|gb|ACF53283.1| methionyl-tRNA formyltransferase [Stenotrophomonas maltophilia
R551-3]
Length = 307
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 116/312 (37%), Positives = 172/312 (55%), Gaps = 14/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFAV++L+A + H +V+VYTQP RPAG RG S V +A +P
Sbjct: 1 MRIVFAGTPEFAVSSLRA-AARHHEVVAVYTQPDRPAG-RGRGLAPSPVKLEAVARGIPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + +Q D+ VVVAYGL++P+ +L G +N HASLLPRWRGAAP
Sbjct: 59 YQPESLKDEAAQQQLRDLQPDLMVVVAYGLILPKAVLAIPTHGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD +TG+ +M+M+ LDTGPV +++PI++ L +L+ L A + +
Sbjct: 119 IQRAIQAGDTKTGVCLMQMEAGLDTGPVLLHQELPIATTDTGGQLHDKLAELGAQVLSDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ E G+TYA K+ K E R+++ A + +RA +P+P A +
Sbjct: 179 LGLLRAGIKPVARPQPEQGVTYAHKLDKAEARLDWVLDAGALARTVRAFNPWPIAEASLA 238
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
ER+++ + ++ PG V+ IAC QGA+R+ LQR GG+ +
Sbjct: 239 G----ERVRIHGAVALDLAHGQAPGTVLAASRDGIDIACGQGALRLRVLQREGGKAITAA 294
Query: 296 DFLLGCP-VIIG 306
D+L + +G
Sbjct: 295 DYLNARRDLRVG 306
>gi|21244524|ref|NP_644106.1| methionyl-tRNA formyltransferase [Xanthomonas axonopodis pv. citri
str. 306]
gi|23821555|sp|Q8PG21|FMT_XANAC RecName: Full=Methionyl-tRNA formyltransferase
gi|21110195|gb|AAM38642.1| 10-Formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase
[Xanthomonas axonopodis pv. citri str. 306]
Length = 307
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 168/305 (55%), Gaps = 9/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT +FAV +L+A + H +V+VYTQP RPAG RG S V +A +P
Sbjct: 1 MRIIFAGTPDFAVPSLRA-AAQRHEVVAVYTQPDRPAG-RGRGLTPSPVKLEAIARGIPV 58
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E + +AD+ VVVAYGL++P+ +L A G +N HASLLPRWRGAAP
Sbjct: 59 FQPQTLRSPEALATLRALDADLMVVVAYGLILPKAVLAAPTHGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETG+ +M+M+ LDTGPV +++ I L L+ L A + +
Sbjct: 119 IQRAIEAGDTETGVCLMQMEAGLDTGPVLLSQRIEIGEQDTGGQLHDRLAALGAQVLSDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ +G+TYA K+ K + R+++ + A+ + +RA +P+P E +
Sbjct: 179 LGLLRAGIRPVAQPQPADGVTYAHKLDKAQARLDWAQPAQELARRVRAFNPWPV--AEAI 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + R+ + + + PG ++ IAC +GA+R+ LQR GG+ + D+
Sbjct: 237 LAGERVRLHGAVALELAHQQPPGTLLAASKQGIDIACGEGALRVRVLQREGGKAITAADY 296
Query: 298 LLGCP 302
L
Sbjct: 297 LNARR 301
>gi|294085061|ref|YP_003551821.1| methionyl-tRNA formyltransferase [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664636|gb|ADE39737.1| methionyl-tRNA formyltransferase [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 319
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 121/317 (38%), Positives = 187/317 (58%), Gaps = 15/317 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+V+MG+ +FA+ L L++ +H I +VYTQPPR +G RG++ + + A + LP
Sbjct: 3 KLRIVYMGSPDFAIPALD-LLAQNHEICAVYTQPPRRSG-RGMQEQPVPLARHALDMGLP 60
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
PT ++ ++ +++AD+ +VVAYGL++PQ +L+ + G NGHASLLPRWRGAA
Sbjct: 61 VSWPTTLNDKDVQDELAAYDADLFIVVAYGLLLPQAVLDIPRYGCLNGHASLLPRWRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD+ETGI+IM M+ LDTGPV R + I+ ++N L L+ L A + +
Sbjct: 121 PIQRAIEAGDSETGISIMLMEAGLDTGPVLATRAIAITDDMNAGDLHDALASLNATLLND 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L+ L +PQ +G+TYA KIS + +++ SA + HIRA +P+PGAW
Sbjct: 181 TVASLDDALLHRTPQASDGVTYAAKISGADAHIDWQTSAAELACHIRAYAPYPGAWCN-- 238
Query: 241 IGNKHERIKLLESQLV----EGEGKPGEV----INPNFTIACSQGAVRIMRLQRAGGRVL 292
RI++LE+Q + G+PG N + G + + +Q AG + +
Sbjct: 239 --GPKGRIRILEAQPAPLPHDTAGQPGSFAGQDDKGNMLMMTGDGILCVTLVQPAGKKPM 296
Query: 293 DIGDFLLGCPVIIGCIV 309
+FL G + IG ++
Sbjct: 297 PSRNFLNGVKLAIGDML 313
>gi|68171442|ref|ZP_00544831.1| Methionyl-tRNA formyltransferase [Ehrlichia chaffeensis str.
Sapulpa]
gi|67999143|gb|EAM85804.1| Methionyl-tRNA formyltransferase [Ehrlichia chaffeensis str.
Sapulpa]
Length = 307
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 102/309 (33%), Positives = 159/309 (51%), Gaps = 16/309 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
++++FMG+ EF+V L AL+ H +++VYT+ P+PAGRRG + +H A++ ++
Sbjct: 4 AMKIIFMGSPEFSVPALCALLEEKDHEVIAVYTRLPKPAGRRGKVLTKTPIHIIAEQNNI 63
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E E+ + N DV VVVAYGL+IP+ +L+ K G N H SLLPRWRGA
Sbjct: 64 EVNTPKSLKHDYEQEKIFALNPDVIVVVAYGLIIPEAVLSIPKYGCINIHPSLLPRWRGA 123
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI++GD +TG+ IM+M++ D G + R +PI N L Q+LS L + ++
Sbjct: 124 APIHYAILSGDEQTGVTIMQMNELWDEGDILLQRDIPIDEQDNIDTLSQKLSNLGSSMLI 183
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + N L P +N + ++ A+ + IRAL P +
Sbjct: 184 E----VLNNIDHLVPIKQNANDATYTNKIIDFHIDCNEEAQVICRKIRALYPKAFLFFN- 238
Query: 240 MIGNKHERIKLLESQLVEG----EGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+R+++L++ KPG VIN + I C G + + +Q G I
Sbjct: 239 -----DKRLRILKANYCPDSDLQNLKPGTVINSHMHIKCKNGVLIPLIVQLEGKNPCSIN 293
Query: 296 DFLLGCPVI 304
DF+ G +
Sbjct: 294 DFIHGYSIS 302
>gi|262376796|ref|ZP_06070023.1| methionyl-tRNA formyltransferase [Acinetobacter lwoffii SH145]
gi|262308141|gb|EEY89277.1| methionyl-tRNA formyltransferase [Acinetobacter lwoffii SH145]
Length = 320
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 117/320 (36%), Positives = 159/320 (49%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L L+ + H IV+VYTQP R AG RG K SAV + A E ++P
Sbjct: 1 MKIIFAGTPEFAATALATLLKTEHEIVAVYTQPDRKAG-RGQKLTASAVKQLALEHNIPV 59
Query: 63 LVPTKLGQEEYEQFLSF------NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + NADV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 YQPLHFKSSTEEGLAAQAELKALNADVMVVAAYGLILPQVVLDTPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD ETG+ IMKM LDTG + PI + +A L +L+V A
Sbjct: 120 RGAAPIQRAIATGDTETGVTIMKMAAGLDTGDMMLKTICPIEATDTSATLHDKLAVKGAE 179
Query: 177 AMVEAMDKLE---QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A V+ ++ E + Q E YA K+SK E ++N+ + A + +IRA +P+P
Sbjct: 180 ATVQVLESEESLQKYLAEREVQDEALTVYAHKLSKAEAQINWSQPAAEIDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQ-GAVRIMRLQRAGG 289
A+ + N S GEVI + C A+ I LQ GG
Sbjct: 240 VAFTPLDDTNNLRIWNSSLSTQQATAAVAGEVIALDKDGVHVMCGDQNAICITNLQWPGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ L+ + +G
Sbjct: 300 KALNAVQINQTQKLSVGYKF 319
>gi|330995803|ref|ZP_08319700.1| methionyl-tRNA formyltransferase [Paraprevotella xylaniphila YIT
11841]
gi|329574533|gb|EGG56098.1| methionyl-tRNA formyltransferase [Paraprevotella xylaniphila YIT
11841]
Length = 326
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 91/321 (28%), Positives = 149/321 (46%), Gaps = 16/321 (4%)
Query: 1 MT----LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ 56
M LR+V+MGT EFAV +L+ LV +++V V T P +P GR S V + A
Sbjct: 1 MKKKEDLRIVYMGTPEFAVESLKCLVEGGYNVVGVVTMPDKPMGRHQDVLQASPVKQYAV 60
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
E L L P KL E + + L +V ++P+ + N +G +N HASLLP++
Sbjct: 61 EHGLRILQPVKLKDETFVEELRSLRADLQIVVAFRMLPEVVWNMPPMGTFNLHASLLPQY 120
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPI A++ G+ ETGI + +DTG V ++PI+ N + +L L
Sbjct: 121 RGAAPINWAVINGETETGITTFFLKHEIDTGEVIQQVRIPIADTDNVGVVHDKLMELGGR 180
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAE-----NVHNHIRALSP 231
+VE +D + + + PQ + + + + +++ +R LSP
Sbjct: 181 LVVETVDHILADAVRPIPQETMAVEGPLHPAPKIFKETCRMDWQGKTLKQLYDFVRGLSP 240
Query: 232 FPGAWLEMMIGNKHERI--KLLES--QLVEGEGKPGEVINPN---FTIACSQGAVRIMRL 284
+P AW EM + K+ E+ + G+V++ +A G +R+ +
Sbjct: 241 YPAAWSEMKDEATGKVYTLKIYETEKEPCACHEPAGKVVSDGKTYLKVAVDGGYLRLKEI 300
Query: 285 QRAGGRVLDIGDFLLGCPVII 305
Q G + + DFL G +
Sbjct: 301 QLTGKKRMRTEDFLRGFRMPE 321
>gi|294666266|ref|ZP_06731517.1| methionyl-tRNA formyltransferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603975|gb|EFF47375.1| methionyl-tRNA formyltransferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 307
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 111/305 (36%), Positives = 168/305 (55%), Gaps = 9/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT +FAV +L+A + H +V+VYTQP RPAG RG S V +A +P
Sbjct: 1 MRIIFAGTPDFAVPSLRA-AAQRHEVVAVYTQPDRPAG-RGRGLTPSPVKLEAIARGIPV 58
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E + +AD+ VVVAYGL++P+ +L A G +N HASLLPRWRGAAP
Sbjct: 59 FQPQTLRSPEALATLRALDADLMVVVAYGLILPKAVLAAPTHGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETG+ +M+M+ LDTGPV +++ I L L+ L A + +
Sbjct: 119 IQRAIEAGDTETGVCLMQMEAGLDTGPVLLSQRIEIGEQETGGQLHDRLAALGAQVLSDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ +G+TYA K+ K + R+++ + A+ + +RA +P+P E +
Sbjct: 179 LGLLRAGIRPVAQPQPADGVTYAHKLDKAQARLDWAQPAQELARRVRAFNPWPV--AEAI 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + R+ + + + PG ++ IAC +GA+R+ LQR GG+ + D+
Sbjct: 237 LAGERVRLHGAVALELAHQQPPGTLLAASKQGIDIACGEGALRVRVLQREGGKAITAADY 296
Query: 298 LLGCP 302
L
Sbjct: 297 LNARR 301
>gi|163859047|ref|YP_001633345.1| methionyl-tRNA formyltransferase [Bordetella petrii DSM 12804]
gi|229487442|sp|A9IFQ1|FMT_BORPD RecName: Full=Methionyl-tRNA formyltransferase
gi|163262775|emb|CAP45078.1| fmt [Bordetella petrii]
Length = 320
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 114/312 (36%), Positives = 162/312 (51%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L AL+++ H I V TQP RPAG RGLK S V + A +
Sbjct: 1 MRLVFAGTPEFARVALDALLAAGHDIPLVLTQPDRPAG-RGLKLTPSPVKQAALAAGIEV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ Q +V VV AYGL++P L G N HASLL
Sbjct: 60 AQPRSLRLDGRYPDDAAQAQAQLRQAAPEVMVVAAYGLILPAWTLALPPRGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPIQRAI AGD +TG+ IM+MD+ LDTG + +VPI + A L L+
Sbjct: 120 PRWRGAAPIQRAIEAGDTQTGVTIMQMDEGLDTGDMLLEHRVPIGAADTAAQLHDALAAA 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+V+A+ L+ NLP PQ +G+TYA K+ K + ++ + A + +RA +P P
Sbjct: 180 GGQAIVQALAALQAGNLPARPQPADGVTYAAKLDKAQAALDCAQPAALLARRVRAFNPVP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGR 290
GA L + ++ ++ ++ PG V+ IA G +R++ LQ+AGG+
Sbjct: 240 GATLRLPGLDEPVKVWRAQALDASAAQAPGSVLRAGPEGIDIATGSGVLRLLELQKAGGK 299
Query: 291 VLDIGDFLLGCP 302
+ F+ G
Sbjct: 300 RQPVDVFVRGWQ 311
>gi|295693193|ref|YP_003601803.1| methionyl-tRNA formyltransferase [Lactobacillus crispatus ST1]
gi|295031299|emb|CBL50778.1| Methionyl-tRNA formyltransferase [Lactobacillus crispatus ST1]
Length = 314
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 94/311 (30%), Positives = 165/311 (53%), Gaps = 13/311 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
++FMGT EF+V L+ L+ + I +V TQP + G R K S A++ LP
Sbjct: 4 IIFMGTPEFSVPVLEGLIDEGYEIKAVVTQPDKKVG-RKQKITKSPAKITAEKHDLPIFQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G +E ++ + +AD+ V AYG +P + LN+ K+ N H SLLP++RG APIQ
Sbjct: 63 PVKLSGSDEMQKLIDMHADLIVTAAYGQFLPTKFLNSVKIAAVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETGI IM+M K +D G + + I + N L +LS++ +++ +
Sbjct: 123 YSLINGDKETGITIMEMVKKMDAGDIYAQEAIKIEPDDNAGTLFSKLSIVGRDLLLKTLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ ++ PQ + ++ I+K + ++N +AE ++ IRAL+P PGA+L +
Sbjct: 183 AIIDGSIKKVPQDPEKVVFSPNITKEQEKLNVDMTAEEANDMIRALNPDPGAYLMIEG-- 240
Query: 244 KHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFL 298
+R K+ ++++ G V+ F I+ + + + ++ +Q +G + +DI FL
Sbjct: 241 --KRFKIWKAEIASDSSSLNAGSVVANKGRFAISFADNSVLNLLEVQPSGKKRMDIKSFL 298
Query: 299 L--GCPVIIGC 307
G + G
Sbjct: 299 NGQGSKFVPGE 309
>gi|325203230|gb|ADY98683.1| methionyl-tRNA formyltransferase [Neisseria meningitidis
M01-240355]
Length = 308
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 120/313 (38%), Positives = 170/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 EQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDAGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+ K E R+++ SA + IRA +P P AW+E
Sbjct: 180 DLQQLQSKGRLNAVKQPEEGVTYAQKLRKEEARIDWSESAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ + +V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 240 QG----KPMKIRRADVVAQQGTAGEVLSCSADGLVVACGENALKITELQPAGGRRMNIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G + G +
Sbjct: 296 FAAGRHIEAGTKL 308
>gi|226226030|ref|YP_002760136.1| methionyl-tRNA formyltransferase [Gemmatimonas aurantiaca T-27]
gi|226089221|dbj|BAH37666.1| methionyl-tRNA formyltransferase [Gemmatimonas aurantiaca T-27]
Length = 324
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 106/318 (33%), Positives = 160/318 (50%), Gaps = 11/318 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT +FAV L+AL+ H ++ V TQP RP GR + S V + A E LP
Sbjct: 1 MRILFWGTPDFAVPPLRALLGEGHDVIGVVTQPDRPRGRSRSQLDPSPVKQVALEEGLPV 60
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K EE+ E + D++VVVAYG ++P+ +++ G N HASLLP RGAAP
Sbjct: 61 LQPAKPRGEEFLEHMRALAPDISVVVAYGHILPKAVIDLPARGTLNIHASLLPALRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G ETG+ IM+M LD G + + +VPI + L L+ + A A+V+A
Sbjct: 121 IQAALLEGMPETGVTIMQMVPALDAGDMLHVVRVPIDIDTTYGELHDTLAEVGALAIVQA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ PQ + TYA KI + +++F A V +RA P PGAW +
Sbjct: 181 LTLIDAGVSHAVPQDDTLATYAAKIDRSTAQLDFAAPATQVQRVVRAFDPRPGAWGTLRG 240
Query: 242 GNKHERIKLLESQLVEG-------EGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRV 291
G+ L + PG V + + C GAVR++ +Q +G
Sbjct: 241 GDVKCFSARLVGDGSDDALDEPTRSSPPGTVRSVDADGMIVRCGVGAVRVLDVQPSGKPR 300
Query: 292 LDIGDFLLGCPVIIGCIV 309
+ + + G V +G
Sbjct: 301 MPVLAWSRGRGVAVGDQF 318
>gi|241664930|ref|YP_002983290.1| methionyl-tRNA formyltransferase [Ralstonia pickettii 12D]
gi|240866957|gb|ACS64618.1| methionyl-tRNA formyltransferase [Ralstonia pickettii 12D]
Length = 327
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 126/325 (38%), Positives = 171/325 (52%), Gaps = 22/325 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL- 60
TLRV F GT EFA L A+ + +V+V +QP RPAG RG++ S V + A
Sbjct: 4 TLRVAFAGTPEFAQIALAAIHQAGFPVVAVLSQPDRPAG-RGMQLQASPVKQYAVTHGFA 62
Query: 61 PALVPTKLGQEEYEQFL---------SFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
P L P L + + DV VV AYGL++PQ +L+ + G N HAS
Sbjct: 63 PILQPPSLRRAGKYPQEAAEVIDALAAQRPDVMVVAAYGLILPQEVLDLPRFGCINIHAS 122
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLPRWRGAAPI RAI AGD E+GI +M+MD LDTG + M +VPI T L L+
Sbjct: 123 LLPRWRGAAPIHRAIEAGDAESGITLMQMDAGLDTGDMIAMERVPIGLTDTTGTLHDTLA 182
Query: 172 VLCAHAMVEA-MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
L +VEA + L +PQ GITYAEKI+K E +++ R A + + A +
Sbjct: 183 ALGGRMVVEALAKLAQYGKLHATPQPAEGITYAEKIAKDEAALDWSRHAAALLRQVHAFN 242
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLV---EGEGKPGEVI---NPNFTIACSQGAVRIMRL 284
PFPGA + IK +++ + E +PG V+ TIAC GA+R+ +L
Sbjct: 243 PFPGASAAL----DGVAIKFWQAEALADRPAEAEPGTVLAANAEGVTIACGAGALRVTQL 298
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
Q+ GG+ L +FL G + G
Sbjct: 299 QKPGGKRLPAREFLQGLAIQPGQRF 323
>gi|77166462|ref|YP_344987.1| methionyl-tRNA formyltransferase [Nitrosococcus oceani ATCC 19707]
gi|254435811|ref|ZP_05049318.1| methionyl-tRNA formyltransferase [Nitrosococcus oceani AFC27]
gi|123593231|sp|Q3J6T9|FMT_NITOC RecName: Full=Methionyl-tRNA formyltransferase
gi|76884776|gb|ABA59457.1| methionyl-tRNA formyltransferase [Nitrosococcus oceani ATCC 19707]
gi|207088922|gb|EDZ66194.1| methionyl-tRNA formyltransferase [Nitrosococcus oceani AFC27]
Length = 323
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 109/310 (35%), Positives = 164/310 (52%), Gaps = 8/310 (2%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
++F GT FA L+ L+ + + I +VYTQP RP+G RG + S V A LP
Sbjct: 7 ILFAGTPVFAAIILRRLLEAKYHIGAVYTQPDRPSG-RGRRPTPSPVKDIAITHQLPLYQ 65
Query: 65 PTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P L + + L+ D+ VV AYGL++P +L LG N HASLLPRWRGAAPIQ
Sbjct: 66 PATLKDKGSQAQLAALAPDLMVVAAYGLILPATVLQIPPLGCINVHASLLPRWRGAAPIQ 125
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
RA++AGD TGI+IM+MD LDTGPV + PI A + +L+ L A A+++ +
Sbjct: 126 RALLAGDKVTGISIMQMDAGLDTGPVVHTARYPIHPKDTAATVHDQLAELGAEALLQCLP 185
Query: 184 KLEQNNLPLSP-QIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
L + ++ Q E+ YA KI K E +++ + A + +RA +P+P A ++
Sbjct: 186 SLLEKKANIATLQDESQACYAPKIRKEEAWLDWSQPAVLLERQVRAFNPWPVAQTQIG-- 243
Query: 243 NKHERIKLLESQLVEGEGKPGE---VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K R+ + PG V +A G +R++ +Q AG RV+ + D+L
Sbjct: 244 GKTLRVWSAAALAQTANALPGTLLAVHKTGIDVATGNGTLRLLEVQLAGKRVMTVQDYLN 303
Query: 300 GCPVIIGCIV 309
+ G ++
Sbjct: 304 AHTLTPGIVL 313
>gi|54295431|ref|YP_127846.1| hypothetical protein lpl2517 [Legionella pneumophila str. Lens]
gi|73919402|sp|Q5WTK7|FMT_LEGPL RecName: Full=Methionyl-tRNA formyltransferase
gi|53755263|emb|CAH16757.1| hypothetical protein lpl2517 [Legionella pneumophila str. Lens]
Length = 314
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 111/299 (37%), Positives = 164/299 (54%), Gaps = 7/299 (2%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
VVF GT EF + L AL+ S H + +VYTQP RPAG RG K S V + A +
Sbjct: 6 VVFAGTPEFGLPCLDALIQSRHHLKAVYTQPDRPAG-RGRKLQESPVKEWAINHQISVYQ 64
Query: 65 PTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P +E LS DV VV+AYGL++P+ +L +LG N HASLLPRWRGA+PIQ
Sbjct: 65 PLNFKNQEAVDELSALKPDVMVVIAYGLILPKAVLEIPRLGCINVHASLLPRWRGASPIQ 124
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
AI+ GD E+G+ IM+MD LDTGP+ P++S+ L +L+ + +++ ++
Sbjct: 125 HAILHGDAESGVTIMQMDVGLDTGPMLCKAACPVTSSDTAGSLHDKLAKMSVKPLLDVLE 184
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
L N+ Q TYA KI+K E R+N+ +SA + IRA +P+P A+ + G
Sbjct: 185 ALASNSAQFELQNNELATYAGKINKEEARINWHQSAVEIDRKIRAFNPWPVAYT--LAGE 242
Query: 244 KHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
RI ++ + PG V+ +A S A+ + ++Q G +V+ + D+L
Sbjct: 243 LMLRIHQAKATDIMSTEMPGMVLNIDKTGMLVATSDNALLVEKIQFPGAKVISVRDWLN 301
>gi|294669087|ref|ZP_06734173.1| methionyl-tRNA formyltransferase [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309079|gb|EFE50322.1| methionyl-tRNA formyltransferase [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 308
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 124/313 (39%), Positives = 174/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ S V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFEIPLVLTQPDRPKG-RGMQLAPSPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + +ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 AQPEKLRNNAEALQMLKGVDADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L L A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMSLGAAAIVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+SK E R+N+ SA + IRA +P P AW+E
Sbjct: 180 DLQQLKTEGRLKSVKQPEEGVTYAQKLSKEEARINWNESAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ ++ V +G+ GEV+ + +AC A++I LQ +GG+ +DI
Sbjct: 240 QG----KPMKIWRAEAVAQQGRAGEVLSCSSDGLIVACGANALKITELQPSGGKRMDIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G V G ++
Sbjct: 296 FAAGHTVEAGTVL 308
>gi|224476325|ref|YP_002633931.1| putative methionyl-tRNA formyltransferase [Staphylococcus carnosus
subsp. carnosus TM300]
gi|254789370|sp|B9DPM5|FMT_STACT RecName: Full=Methionyl-tRNA formyltransferase
gi|222420932|emb|CAL27746.1| putative methionyl-tRNA formyltransferase [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 310
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 100/308 (32%), Positives = 167/308 (54%), Gaps = 13/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ RV+FMGT +F+ L+ L++ +++V TQP RP G R V + A E +
Sbjct: 1 MS-RVIFMGTPDFSTKVLEMLIAEE-DVIAVVTQPDRPVG-RKRVMTPPPVKEVALENGI 57
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K+ Q + Q + D+ V A+G ++P+ +L+A KLG N HASLLP++RG
Sbjct: 58 EVYQPEKISQSDDLQTLIDMEPDLIVTAAFGQILPKSLLDAPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETG+ IM M LD G + + + I +N N + +LS L A +
Sbjct: 118 APIHQAIIDGEKETGVTIMYMAPKLDAGDIISQQAIEIEANDNVESMHDKLSFLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ Q ++ T+A IS+ + R+++ +SAE V+NHIR LSP+P A+ ++
Sbjct: 178 KTLPEIINGTNDRIAQDDDKATFASNISREDERIDWTQSAEQVYNHIRGLSPWPVAYTKL 237
Query: 240 MIGNKHERIKLLESQLVEGE-GKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLDI 294
N KL +++ EG+ G PGE++ + A+ + +Q +G + +
Sbjct: 238 DDTNM----KLYAARIEEGKKGNPGEILETTKKAIIVGTGSDDAIALTEIQLSGKKRMPT 293
Query: 295 GDFLLGCP 302
+FL G
Sbjct: 294 ANFLSGYQ 301
>gi|237749121|ref|ZP_04579601.1| methionyl-tRNA formyltransferase [Oxalobacter formigenes OXCC13]
gi|229380483|gb|EEO30574.1| methionyl-tRNA formyltransferase [Oxalobacter formigenes OXCC13]
Length = 314
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 123/319 (38%), Positives = 176/319 (55%), Gaps = 21/319 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VF GT EFA L+A+ + H I V TQP RPAG RG+K SAV K A E+ +P
Sbjct: 1 MKIVFAGTPEFASMALEAVKRNGHDIELVLTQPDRPAG-RGMKMQPSAVKKTAMEYGIPV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ Q Y++ DV VVVAYGL++P+ L+ K G N HASLL
Sbjct: 60 EQPVSLKINGKYGEEAQRVYDKIRQIAPDVMVVVAYGLILPKEFLDIPKYGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPIQRAI AGD ETGI+IM+M++ LDTGPV K+ I N+N + L +L+VL
Sbjct: 120 PRWRGAAPIQRAIEAGDKETGISIMQMEEGLDTGPVLLQEKIAIDKNVNASQLHDQLAVL 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ A+++L+ L PQ E YA KI K E ++F A + + IRA +PFP
Sbjct: 180 GGKMIASALERLD--TLVPVPQNETEANYAAKILKEEATLDFTLDATAIADKIRAFNPFP 237
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGE-GKP-GEVIN---PNFTIACSQGAVRIMRLQRAG 288
G + +K+ +++ G P G++++ +AC G + I+ LQ+ G
Sbjct: 238 GC----VAHYNDVPVKIWKAETANANSGAPAGKIVSADENGIVVACGNGTLNILELQKPG 293
Query: 289 GRVLDIGDFLLGCPVIIGC 307
+ L + +F+ G G
Sbjct: 294 AKRLPVSEFIKGFSFDNGD 312
>gi|316985957|gb|EFV64896.1| methionyl-tRNA formyltransferase [Neisseria meningitidis H44/76]
Length = 338
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 121/314 (38%), Positives = 173/314 (55%), Gaps = 11/314 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 30 AMKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLR 88
Query: 62 ALVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGA
Sbjct: 89 VEQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGA 148
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 149 APIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVV 208
Query: 180 EAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ +L+ Q E G+TYA+K+SK E R+++ +SA + IRA +P P AW+E
Sbjct: 209 ADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSKSAAVIERKIRAFNPVPAAWVE 268
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 269 YQG----KPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGENALKITELQPAGGRRMNIA 324
Query: 296 DFLLGCPVIIGCIV 309
F G + G +
Sbjct: 325 AFAAGRHIEAGAKL 338
>gi|217964024|ref|YP_002349702.1| methionyl-tRNA formyltransferase [Listeria monocytogenes HCC23]
gi|254789358|sp|B8DDS9|FMT_LISMH RecName: Full=Methionyl-tRNA formyltransferase
gi|217333294|gb|ACK39088.1| methionyl-tRNA formyltransferase [Listeria monocytogenes HCC23]
gi|307571405|emb|CAR84584.1| fmt [Listeria monocytogenes L99]
Length = 312
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 102/318 (32%), Positives = 162/318 (50%), Gaps = 15/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L L +S++ +V+V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPEFSVPVLTQL-ASTYDVVAVVTQPDRPVG-RKRVLTPPPVKKAALELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E E+ ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSKLGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ +T+A IS+ + ++++ + + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITAIPQDPEKVTFARNISREQEKIDWTKPGRTIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLESQLVEG--EGKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDI 294
+ K+ E+ E G+PG ++ I G + + +Q AG +DI
Sbjct: 238 EE----KPFKIWEATYEETKESGEPGAILADKTTLKIVTGDGTLIVPTVIQPAGKPKMDI 293
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 294 HSFMSGAGRNLSKTTRFG 311
>gi|258545466|ref|ZP_05705700.1| methionyl-tRNA formyltransferase [Cardiobacterium hominis ATCC
15826]
gi|258519299|gb|EEV88158.1| methionyl-tRNA formyltransferase [Cardiobacterium hominis ATCC
15826]
Length = 310
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 116/315 (36%), Positives = 164/315 (52%), Gaps = 12/315 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M+ R+ F GT FA +LQ L++S ++I V TQP RPAG RG K SAV + A +
Sbjct: 1 MSARLWFAGTPAFAAHSLQTLINSGDYTIDGVLTQPDRPAG-RGRKLTASAVKETALAHN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP P KL + D+ +V AYGL++P L +LG N HASLLPRWRGA
Sbjct: 60 LPVAQPEKLHADAPPFAELPRPDLIIVAAYGLLLPPWFLAYPRLGCLNIHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD ETGI IM+MDK LDTG V ++PI+++ A L L L + ++
Sbjct: 120 APIQRAIEAGDAETGICIMQMDKGLDTGAVWTEARLPITADDTAASLHDRLMTLGSATLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + +PQ +GITYA K++K E R+++ + IRA +P P A +
Sbjct: 180 RTLPDVLAQTRQPTPQAADGITYAHKLNKAEARLDWHAPVATLDRKIRAYNPTPIAHTTL 239
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDI 294
E +++ + ++ PG + +AC+ G +RI RLQ G D
Sbjct: 240 ----DGEVLRIHAAHVLNHTPAAAPGTITAHHADGLDVACADGTLRITRLQLPGKTATDA 295
Query: 295 GDFLLGCPVIIGCIV 309
L + G +
Sbjct: 296 AA-LRHSRDLTGQQL 309
>gi|206603586|gb|EDZ40066.1| Methionyl-tRNA formyltransferase [Leptospirillum sp. Group II
'5-way CG']
Length = 319
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 96/312 (30%), Positives = 163/312 (52%), Gaps = 6/312 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+RVVFMGT + AV L+ALV ++ +V V+TQP +PAG RG S V + A+ +P
Sbjct: 7 KIRVVFMGTPQIAVPFLEALVEKNYPVVGVFTQPDKPAG-RGYTLHSSPVRRSAESRGIP 65
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P ++++ ++ DV VVVAYG ++P+ +L + G N HASLLP RGA+
Sbjct: 66 VMTPGSLKHEDDWRILREWSPDVIVVVAYGKILPKEMLQLPRFGCLNVHASLLPELRGAS 125
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI+ G +G+ +MKMD+ +DTGPV ++ I N + L +++ +++
Sbjct: 126 PIQWAILKGLAVSGLTLMKMDEGMDTGPVLDQCQIAIEPNETSLTLMEKMMDQGPPFLLK 185
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + Q + T A I K +++F ++AE V H+RA++P+PG + +
Sbjct: 186 TLPEYLLGKIQPVAQSGD-ATLAPLIRKNMGKLDFSQTAEQVDRHVRAMNPWPGTFCDSP 244
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+G + PG + + C G + +Q+AGG+ + +F
Sbjct: 245 LGILKFLSGSIWEDNSGKVATPGMIWEGPKQEILVRCGSGVYCVREIQKAGGKAMSAREF 304
Query: 298 LLGCPVIIGCIV 309
L G + G ++
Sbjct: 305 LKGHQSLPGMVL 316
>gi|56477099|ref|YP_158688.1| methionyl-tRNA formyltransferase [Aromatoleum aromaticum EbN1]
gi|73919372|sp|Q5P4H6|FMT_AZOSE RecName: Full=Methionyl-tRNA formyltransferase
gi|56313142|emb|CAI07787.1| methionyl-tRNA formyltransferase [Aromatoleum aromaticum EbN1]
Length = 316
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 129/312 (41%), Positives = 175/312 (56%), Gaps = 9/312 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+V F GT EFA A L+A++++ + V TQP RPAG RG+K S V + A +
Sbjct: 5 PLKVAFAGTPEFAAAALEAILAAGFEVPLVLTQPDRPAG-RGMKLSPSPVKQLALAHGIA 63
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P+ G+E+ + DV VV AYGL++P+ +L+ + G N HASLLPRWRGAA
Sbjct: 64 VDQPSSLRGEEQRATLAACAPDVLVVAAYGLILPRAVLDLPRFGCLNIHASLLPRWRGAA 123
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI RAI AGD ETGI IM+MD+ LDTGP+ VPI T L L+ L A +VE
Sbjct: 124 PIHRAIEAGDTETGITIMQMDEGLDTGPMLMKHAVPIGPADTTGALHDRLAALGAQMIVE 183
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ +L L PQ G TYA KI K E +++ A +V +RA +PFPGA +
Sbjct: 184 ALRRLPSGELVAMPQPAEGATYAGKIGKAEAVIDWQCDASSVARAVRAFNPFPGAVASL- 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +K+ ++ V G G+PG V+ +AC AVR+ +LQ+ G R L G+F
Sbjct: 243 ---RQVPLKIWFAEPVAGHGEPGTVLVADADGIVVACGTQAVRLAQLQKPGSRRLAAGEF 299
Query: 298 LLGCPVIIGCIV 309
L G PV G
Sbjct: 300 LRGFPVSAGERF 311
>gi|317133048|ref|YP_004092362.1| methionyl-tRNA formyltransferase [Ethanoligenens harbinense YUAN-3]
gi|315471027|gb|ADU27631.1| methionyl-tRNA formyltransferase [Ethanoligenens harbinense YUAN-3]
Length = 309
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 111/313 (35%), Positives = 160/313 (51%), Gaps = 10/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT FAV T + +V+ H I V+TQP +P G R ++ V A+E P
Sbjct: 1 MRIVFMGTPAFAVETFRRIVADGHEIGGVFTQPDKPQG-RKMRLTPPPVKLAAEEIGAPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + V VVVAYG ++P+++LN KLG N HASLLP +RGAAP
Sbjct: 60 FQPATLKDPAVQRTIFNLAPQVIVVVAYGQILPEKVLNIPKLGCINLHASLLPHYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ ETG+ M M K LDTG + R VPI + L +L + A + E
Sbjct: 120 IQWAVINGERETGVTTMHMAKGLDTGDMILKRTVPIGEDETYGELHDKLMRVGARLVSET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE N P Q + TYA +I+ ++F +SA HN +R LSP PGA+
Sbjct: 180 LPLLESGNAPREKQDDALATYAPRITHETGLLDFAKSAAAAHNLVRGLSPAPGAYTNFRG 239
Query: 242 GNKHERIKLLESQLV-EGEGKPGEVINPN--FTIACSQG-AVRIMRLQRAGGRVLDIGDF 297
+K+ ++L G PG V + C G VR++ +Q GG+ +D+ +
Sbjct: 240 KG----LKVWSTRLSGVRNGVPGTVFPDGETLEVLCGDGCCVRLLEVQEQGGKRMDVALY 295
Query: 298 LLGCPVIIGCIVG 310
L G + G +G
Sbjct: 296 LRGHHPLPGERMG 308
>gi|148358672|ref|YP_001249879.1| methionyl tRNA formyltransferase [Legionella pneumophila str.
Corby]
gi|166214905|sp|A5IAY3|FMT_LEGPC RecName: Full=Methionyl-tRNA formyltransferase
gi|148280445|gb|ABQ54533.1| methionyl tRNA formyltransferase [Legionella pneumophila str.
Corby]
Length = 314
Score = 161 bits (406), Expect = 2e-37, Method: Composition-based stats.
Identities = 112/304 (36%), Positives = 168/304 (55%), Gaps = 8/304 (2%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M+ L VVF GT EF ++ L AL+ S H + +VYTQP RPAG RG K S V + A
Sbjct: 1 MSGLTVVFAGTPEFGLSCLDALIQSRHHLKAVYTQPDRPAG-RGRKLQESPVKEWAINNQ 59
Query: 60 LPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P +E LS DV VV+AYGL++P+ +L +LG N HASLLPRWRG
Sbjct: 60 VPVYQPLNFKNQEAIDELSALKPDVMVVIAYGLILPKAVLEIPRLGCINVHASLLPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+PIQ AI+ GD E+G+ IM+MD LDTGP+ P++S+ L +L+ + +
Sbjct: 120 ASPIQHAILHGDAESGVTIMQMDVGLDTGPMLCKATCPVTSSDTAGSLHDKLAKMSVKPL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ ++ L N+ Q TYA KI+K E R+N+ +SA + IRA +P+P A+
Sbjct: 180 LDVLEALASNSAQFELQNNELATYAGKINKEEARINWHQSAVEIDRKIRAFNPWPVAYT- 238
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ RI ++ + PG V+ +A + A+ + ++Q G +V+ +
Sbjct: 239 -LAEELMLRIHQAKATDIMSTEMPGMVLNIDKNGMLVATNDNALLVEKIQFPGAKVISVR 297
Query: 296 DFLL 299
D+L
Sbjct: 298 DWLN 301
>gi|333029265|ref|ZP_08457326.1| Methionyl-tRNA formyltransferase [Bacteroides coprosuis DSM 18011]
gi|332739862|gb|EGJ70344.1| Methionyl-tRNA formyltransferase [Bacteroides coprosuis DSM 18011]
Length = 324
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 101/314 (32%), Positives = 160/314 (50%), Gaps = 13/314 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLR+++MGT EFAV +L+ LV + +++V+V T P +PAG RG K S V K A LP
Sbjct: 5 TLRIIYMGTPEFAVESLKELVENEYNVVAVVTMPDKPAG-RGHKIQYSDVKKYALSQHLP 63
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P+ L E + + L +V ++P+ + + +LG +N HASLLP++RGAAP
Sbjct: 64 ILQPSNLKDEAFIEELKSYKADLQIVVAFRMLPEVVWDMPRLGTFNLHASLLPQYRGAAP 123
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD ETG+ ++ +DTG + KV I N + + +L +L + E
Sbjct: 124 INWAIINGDKETGVTTFFLEHEIDTGKIIMQEKVAIGENDSVGEIHDKLMILGGKVVTET 183
Query: 182 MDKLEQNNLPLSPQIENGITYAEKI------SKGETRVNFCRSAENVHNHIRALSPFPGA 235
+D++ N + Q + ++ K +N+ + E VHN IR LSP+P A
Sbjct: 184 VDRIIANQVNPLSQSQIIENECIEMRPAPKIFKETCEINWDQPLEVVHNFIRGLSPYPAA 243
Query: 236 WLEMM-IGNKHERIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGG 289
W + + ++K+ +++ V E G V IA G + I+ +Q G
Sbjct: 244 WSTLTSTSGESWKVKIFKTRKVQKEHNIAIGSVFQEGREDLKIAVQGGYLDILEMQLPGK 303
Query: 290 RVLDIGDFLLGCPV 303
R + I D L G +
Sbjct: 304 RRMPIADLLRGFDI 317
>gi|254303914|ref|ZP_04971272.1| methionyl-tRNA formyltransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148324106|gb|EDK89356.1| methionyl-tRNA formyltransferase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 310
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 87/315 (27%), Positives = 160/315 (50%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT FA+ +L+ + H I+SV+T+ +P RG K S + + A L
Sbjct: 1 MRIIFMGTPRFALPSLEKIYK-EHEIISVFTKVDKP-NARGKKINFSPIKEFALANDLKI 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E+ + AD+ VVVAYG ++P+ I++ K G N H+SLLPR+RGAAP
Sbjct: 59 YQPENFKDSSLIEEIRNMQADLIVVVAYGKILPKEIIDIPKYGVINLHSSLLPRFRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GDN++G++IM +++ LD G + + I+ L L + A +++A
Sbjct: 119 INAAIINGDNKSGVSIMYVEEELDAGDIILQEETEITDEDTFLSLHDRLKDIGADLLLKA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ +E+ + Q E +T+ + K + R+++ +++ + N IR ++P P A+ +
Sbjct: 179 IELIEKGQVKAQKQDEKLVTFVKPFRKEDCRIDWTKTSREIFNFIRGMNPVPTAFSNLNE 238
Query: 242 GNKHERIKLLESQLVE---GEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDI 294
IK+ E+++ + GEV+ + G++ I + + +
Sbjct: 239 T----IIKIYETKINDKVYNNATCGEVVEYLKGKGIVVKTGDGSLIISSAKPENKKQMSG 294
Query: 295 GDFLLGCPVIIGCIV 309
D + G + IG +
Sbjct: 295 VDLINGKFLKIGEKL 309
>gi|227524618|ref|ZP_03954667.1| methionyl-tRNA formyltransferase [Lactobacillus hilgardii ATCC
8290]
gi|227088293|gb|EEI23605.1| methionyl-tRNA formyltransferase [Lactobacillus hilgardii ATCC
8290]
Length = 315
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 101/313 (32%), Positives = 168/313 (53%), Gaps = 14/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
VVFMGT F V L+ LV + +++ TQP RP G R + S V ++A+ ++P L
Sbjct: 5 VVFMGTPSFGVPVLKGLVDQGYQVLAAVTQPDRPVG-RKHQIQKSPVKQQAEALNIPVLQ 63
Query: 65 PTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K+ + Q + + D+ V A+G +P ++LNA K+ N H SLLP++RG APIQ
Sbjct: 64 PEKISGSDEMQQLIEMHPDLIVTAAFGQFLPTKLLNAVKIAAVNVHGSLLPKYRGGAPIQ 123
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
AI+ GD ETGI+I+ M K +D G + + +PI++ +TA + +LS++ +++ +
Sbjct: 124 YAILNGDKETGISIIYMVKKMDAGDILAQQAIPINNTDDTASMFAKLSLVGRDLLLKTLP 183
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ + Q + ++ I E +++F +SA V +RAL P P A+ +
Sbjct: 184 KVISGEITPIKQDPEKVIFSPTIKPEEEKLDFFKSAFLVDAKVRALRPDPTAYTTL---- 239
Query: 244 KHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAV-RIMRLQRAGGRVLDIGDF 297
+R K+ +S +V+G+ KPG ++ IA G++ I+ LQ AG I D+
Sbjct: 240 NGKRTKIWKSAVVDGQTPRKPGVIVEKTKHQLQIAAGGGSILEILELQPAGKPRQAITDY 299
Query: 298 LLGCP--VIIGCI 308
L G + +G
Sbjct: 300 LNGAGQALKVGQK 312
>gi|159042737|ref|YP_001531531.1| methionyl-tRNA formyltransferase [Dinoroseobacter shibae DFL 12]
gi|189044509|sp|A8LLC0|FMT_DINSH RecName: Full=Methionyl-tRNA formyltransferase
gi|157910497|gb|ABV91930.1| methionyl-tRNA formyltransferase [Dinoroseobacter shibae DFL 12]
Length = 299
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 146/304 (48%), Positives = 185/304 (60%), Gaps = 9/304 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT F+V L ALV++ H + +VY QPPRPAG RG K S V +A+ L
Sbjct: 1 MRLVFMGTPAFSVPVLDALVAAGHEVAAVYCQPPRPAG-RGKKPRPSPVQARAEVLGLAV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P G E F + A++AVVVAYGL++PQ +L+A + G +N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKGAEAQADFAALGAEIAVVVAYGLILPQAVLDAPEHGCWNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAI+AGD ETG+ IM+M+ LDTGPV V I + T GL LS L A +VEA
Sbjct: 120 IHRAILAGDAETGVCIMQMEAGLDTGPVLLREAVAIGAEETTGGLHDRLSALGARLIVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + PQ E G+TYA KI K E RV++ R A V IR LSP PGAW E+
Sbjct: 180 LARRAELVPE--PQPEVGVTYAAKIDKAEARVDWSRPAVEVDRLIRGLSPVPGAWCEIAG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
ER+KLL S+L EG G G+V+ FT+AC GAV I R QRAG + D + L G
Sbjct: 238 ----ERVKLLGSRLAEGSGAAGQVL-EGFTLACGVGAVEITRAQRAGRKAADAAEILRGM 292
Query: 302 PVII 305
+
Sbjct: 293 TLPA 296
>gi|298372701|ref|ZP_06982691.1| methionyl-tRNA formyltransferase [Bacteroidetes oral taxon 274 str.
F0058]
gi|298275605|gb|EFI17156.1| methionyl-tRNA formyltransferase [Bacteroidetes oral taxon 274 str.
F0058]
Length = 339
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 101/305 (33%), Positives = 162/305 (53%), Gaps = 7/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++++MGT EFAV L+AL+ S IV+V T P +P G RG K S V + A E LP
Sbjct: 38 MKIIYMGTPEFAVYPLKALLDSGKQIVAVVTVPDKPVG-RGQKVRFSPVKEFALENKLPL 96
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L PT L + + + L +V ++P+ + N +LG N HASLLP++RGAAPI
Sbjct: 97 LQPTNLKDDAFIETLRAFGADLQIVVAFRMLPEAVWNMPRLGTVNLHASLLPQYRGAAPI 156
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
RAI+ G+ TG+ ++ +DTG + + V I N L +L+ + + +VE +
Sbjct: 157 NRAIIDGETRTGVTTFRLKHEIDTGDILLQQSVDILPTDNAGSLHDKLAAIGSKLVVETV 216
Query: 183 DKLEQNNLPLSPQIENGI-TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E N++ Q + + A KI K + R++F ++ +HN +R L+P+P AW E
Sbjct: 217 EAIENNSVQPVVQPTDCMLKSAPKIFKDDCRLDFSKTCLQLHNTVRGLAPYPTAWFEYNG 276
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFT---IACSQGAVRIMRLQRAGGRVLDIGDFL 298
E + + G +++ N T +A + G + + LQ AG R ++IGD L
Sbjct: 277 LLIKVFETDYE--QTDHSFEFGRIVSDNKTYAKVAVADGFLYLKNLQLAGKRRMNIGDLL 334
Query: 299 LGCPV 303
LG
Sbjct: 335 LGHKF 339
>gi|296108238|ref|YP_003619939.1| methionyl-tRNA formyltransferase [Legionella pneumophila 2300/99
Alcoy]
gi|295650140|gb|ADG25987.1| methionyl-tRNA formyltransferase [Legionella pneumophila 2300/99
Alcoy]
Length = 314
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 113/304 (37%), Positives = 169/304 (55%), Gaps = 8/304 (2%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M+ L VVF GT EF ++ L AL+ S H + +VYTQP RPAG RG K S V + A
Sbjct: 1 MSGLTVVFAGTPEFGLSCLDALIQSRHHLKAVYTQPDRPAG-RGRKLQESPVKEWAINNQ 59
Query: 60 LPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P +E LS DV VV+AYGL++P+ +L +LG N HASLLPRWRG
Sbjct: 60 VPVYQPLNFKNQEAIDELSALKPDVMVVIAYGLILPKAVLEIPRLGCINVHASLLPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+PIQ AI+ GD E+G+ IM+MD LDTGP+ P++S+ L +L+ + +
Sbjct: 120 ASPIQHAILHGDAESGVTIMQMDVGLDTGPMLCKATCPVTSSDTAGSLHDKLAKMSVKPL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ ++ L N+ Q TYA KI+K E R+N+ +SA + IRA +P+P A+
Sbjct: 180 LDVLEALASNSAQFELQNNELATYAGKINKEEARINWHQSAVEIDRKIRAFNPWPVAYT- 238
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ G RI ++ + PG V+ +A + A+ + ++Q G +V+ +
Sbjct: 239 -LAGELMLRIHQAKATDIMSTEMPGMVLNVDKNGMLVATNDNALLVEKIQFPGAKVISVR 297
Query: 296 DFLL 299
D+L
Sbjct: 298 DWLN 301
>gi|15676039|ref|NP_273169.1| methionyl-tRNA formyltransferase [Neisseria meningitidis MC58]
gi|21542060|sp|Q9K1K6|FMT_NEIMB RecName: Full=Methionyl-tRNA formyltransferase
gi|7225326|gb|AAF40570.1| methionyl-tRNA formyltransferase [Neisseria meningitidis MC58]
gi|325141256|gb|EGC63755.1| methionyl-tRNA formyltransferase [Neisseria meningitidis CU385]
gi|325199325|gb|ADY94780.1| methionyl-tRNA formyltransferase [Neisseria meningitidis H44/76]
Length = 308
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 121/313 (38%), Positives = 173/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 EQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+SK E R+++ +SA + IRA +P P AW+E
Sbjct: 180 DLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSKSAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 240 QG----KPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGENALKITELQPAGGRRMNIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G + G +
Sbjct: 296 FAAGRHIEAGAKL 308
>gi|148285008|ref|YP_001249098.1| methionyl-tRNA formyltransferase [Orientia tsutsugamushi str.
Boryong]
gi|166215492|sp|A5CF64|FMT_ORITB RecName: Full=Methionyl-tRNA formyltransferase
gi|146740447|emb|CAM80943.1| methionyl-tRNA formyltransferase [Orientia tsutsugamushi str.
Boryong]
Length = 307
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 104/313 (33%), Positives = 177/313 (56%), Gaps = 13/313 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMG+ EFA+ L+ LV S H++++V+T P+ R L S +HK A S+P
Sbjct: 1 MKIIFMGSPEFAIPALKELVLSKHNVIAVFTSKPKKR-DRYLNIQRSPIHKLASALSIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L + + ++ DV VV AYGL+IP+ IL K G N H S+LP++RGAAP
Sbjct: 60 YTPDSLKTNDVQNLIATFDADVIVVAAYGLIIPKAILKMKKYGCINIHPSMLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQR I+ G+ ET + I++MD+ +DTG + +K ++ NI + L + + + A +V+A
Sbjct: 120 IQRTIINGEKETAVCIIQMDQGVDTGDIILCQKFHLAKNICFSELHDQCAKVGAKLVVKA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ + LP PQ ++ +YA K+SK E+++N+ SA + IR ++P+PG +
Sbjct: 180 INY--IHTLPRIPQSQDRASYAHKLSKSESKINWYESAYTIDCKIRGMNPWPGTFFTHNN 237
Query: 242 GNKHERIKLLESQLVEGEG--KPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
N IK+L++++V +PG V N +AC + + ++ LQ G + L
Sbjct: 238 CN----IKVLKAKIVNNSHNLQPGTVKIANNDKLLVACQEHFLELLSLQLPGRKELSSDQ 293
Query: 297 FLLGCPVIIGCIV 309
FL G ++ ++
Sbjct: 294 FLCGYHILPDTVL 306
>gi|16801003|ref|NP_471271.1| hypothetical protein lin1937 [Listeria innocua Clip11262]
gi|21542049|sp|Q92AI5|FMT_LISIN RecName: Full=Methionyl-tRNA formyltransferase
gi|16414438|emb|CAC97167.1| fmt [Listeria innocua Clip11262]
gi|313618294|gb|EFR90348.1| methionyl-tRNA formyltransferase [Listeria innocua FSL S4-378]
Length = 312
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 100/318 (31%), Positives = 160/318 (50%), Gaps = 15/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT F+V L+ L S+ + +++V TQP RP G R V K A E +
Sbjct: 1 MT-KIIFMGTPAFSVPVLEQLASA-YDVIAVVTQPDRPVG-RKRILTPPPVKKAALELGI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E E+ +S AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELEELISLEADLLVTAAYGQILPNTLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITEEDNTGTMFDKLSKLGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + Q +T+A IS+ + ++N+ + + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITAVAQDPEKVTFARNISREQEKINWTKPGRTIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLES--QLVEGEGKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDI 294
+ K+ E+ + + G+PG ++ I G + + +Q AG +DI
Sbjct: 238 EE----KPFKIWEATFEDTKTSGEPGTILTDKSTLKIVAGDGTLIVPTVIQPAGKPKMDI 293
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 294 HSFMSGAGRNLSKTTRFG 311
>gi|325129147|gb|EGC51995.1| methionyl-tRNA formyltransferase [Neisseria meningitidis N1568]
Length = 308
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 122/313 (38%), Positives = 173/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALRAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+A K G N HASLLPRWRGAA
Sbjct: 60 EQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDAPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIRPTDTANEVHDALMEIGAAAVVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+SK E R+++ SA + IRA +P P AW+E
Sbjct: 180 DLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSESAAVIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 240 QG----KPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGENALKITELQPAGGRRMNIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G + G +
Sbjct: 296 FAAGRHIEAGAKL 308
>gi|163845633|ref|YP_001633677.1| methionyl-tRNA formyltransferase [Chloroflexus aurantiacus J-10-fl]
gi|222523337|ref|YP_002567807.1| methionyl-tRNA formyltransferase [Chloroflexus sp. Y-400-fl]
gi|226704292|sp|A9WAR0|FMT_CHLAA RecName: Full=Methionyl-tRNA formyltransferase
gi|254789347|sp|B9LFJ4|FMT_CHLSY RecName: Full=Methionyl-tRNA formyltransferase
gi|163666922|gb|ABY33288.1| methionyl-tRNA formyltransferase [Chloroflexus aurantiacus J-10-fl]
gi|222447216|gb|ACM51482.1| methionyl-tRNA formyltransferase [Chloroflexus sp. Y-400-fl]
Length = 310
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 89/315 (28%), Positives = 155/315 (49%), Gaps = 15/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F+G+ FAV L+ALV++ H IV V TQP RPAG R + V A +LP
Sbjct: 1 MRILFLGSPSFAVHALEALVAAGHEIVGVVTQPDRPAG-RDRRLTPPPVKIAAMAHNLPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P E + +V VV AYG ++ + +L+ LG+ N H SLLP +RG P
Sbjct: 60 LQPETLRDPTVVETLSALQPEVGVVAAYGEILRRAVLSIPPLGYLNIHPSLLPLYRGPTP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ AI+AG+ TG+ IM +D +D+GP+ V + L EL + A +V+
Sbjct: 120 VAGAILAGETVTGVTIMLLDPSMDSGPILAQAVVDLPPTARAGQLTDELFRIGADLLVQV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + + PQ + T + + K + R+++ A + RA P+PGA+
Sbjct: 180 LPRYARGEIEPRPQDHSRATVTKMLKKEDGRIDWSLPAIVIERMTRAYDPWPGAYTF--- 236
Query: 242 GNKHERIKLLESQLVEGEGK--PGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + ++++++ + +G PG VI + + + A+ ++ +Q A R +
Sbjct: 237 -WRGQPLRIIKAAVASADGTNVPGTVIGRSGSGHPLVQTGSDALELIEVQPASRRPMSGS 295
Query: 296 DFLLGCP---VIIGC 307
+L G + +G
Sbjct: 296 AWLAGVHADNIRLGE 310
>gi|227513476|ref|ZP_03943525.1| methionyl-tRNA formyltransferase [Lactobacillus buchneri ATCC
11577]
gi|227083349|gb|EEI18661.1| methionyl-tRNA formyltransferase [Lactobacillus buchneri ATCC
11577]
Length = 315
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 99/313 (31%), Positives = 168/313 (53%), Gaps = 14/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
VVFMGT F V L+ LV + +++ TQP RP G R + S V ++A+ ++P L
Sbjct: 5 VVFMGTPSFGVPVLKGLVDQGYQVLAAVTQPDRPVG-RKHQIQKSPVKQQAEALNIPVLQ 63
Query: 65 PTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K+ + Q + + D+ V A+G +P ++LNA K+ N H SLLP++RG AP+Q
Sbjct: 64 PEKISGSDEMQQLIEMHPDLIVTAAFGQFLPTKLLNAVKIAAVNVHGSLLPKYRGGAPVQ 123
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
AI+ GD ETGI+I+ M K +D G + + +PI++ +TA + +LS++ +++ +
Sbjct: 124 YAILNGDKETGISIIYMVKKMDAGDILAQQAIPINNTDDTASMFAKLSLVGRDLLLKTLP 183
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ + Q + ++ I E +++F +SA V +RAL P P A+ +
Sbjct: 184 KVISGEITPIKQDPEKVIFSPTIKPEEEKLDFFKSAFLVDAKVRALRPDPTAYTTL---- 239
Query: 244 KHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAV-RIMRLQRAGGRVLDIGDF 297
+R K+ +S +V+G+ +PG ++ IA G++ I+ LQ AG I D+
Sbjct: 240 NGKRTKIWKSAVVDGQTPLEPGVIVEKTKHQLQIAAGGGSILEILELQPAGKPRQAITDY 299
Query: 298 LLGCP--VIIGCI 308
L G + +G
Sbjct: 300 LNGAGQALKVGQK 312
>gi|289209432|ref|YP_003461498.1| methionyl-tRNA formyltransferase [Thioalkalivibrio sp. K90mix]
gi|288945063|gb|ADC72762.1| methionyl-tRNA formyltransferase [Thioalkalivibrio sp. K90mix]
Length = 320
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 107/310 (34%), Positives = 160/310 (51%), Gaps = 8/310 (2%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
RVV+ GT +FAV L+AL+ V+VYTQP RPAG RG + S V A+ +P
Sbjct: 12 RVVYAGTPDFAVPALEALIECGPRPVAVYTQPDRPAG-RGRQLRPSPVKVAAEAAGIPVR 70
Query: 64 VPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P L E + L+ + D+ +V AYGL++P+ +L + G N HASLLPRWRGAAPI
Sbjct: 71 QPESLKSPEAQAELATWRPDILIVAAYGLILPRAVLEIPRRGGLNIHASLLPRWRGAAPI 130
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
RAI+AGD+ETG+ +M+M LDTGPV R PI++ T L L+ L A ++E +
Sbjct: 131 HRAILAGDSETGVCLMQMAPGLDTGPVHACRSTPITATTTTGELHDTLATLGAELLLEWL 190
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
++ PQ + TYA K+ K E ++F R A + +RA +P+P A
Sbjct: 191 PEILAGRSQPEPQDDADATYAHKLEKNEAWLDFARPAVELDRQVRAFNPWPVAQARWG-- 248
Query: 243 NKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ R+ + +PG + + +G +R+ +Q G R + D+
Sbjct: 249 EQVIRVHAARPLPGPADPEPGTIRAAGRDGVEVGTGEGRLRLETVQLPGRRPVAAADWAN 308
Query: 300 GCPVIIGCIV 309
+ G +
Sbjct: 309 TTAL-AGQRL 317
>gi|296117965|ref|ZP_06836548.1| methionyl-tRNA formyltransferase [Corynebacterium ammoniagenes DSM
20306]
gi|295969196|gb|EFG82438.1| methionyl-tRNA formyltransferase [Corynebacterium ammoniagenes DSM
20306]
Length = 324
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 104/315 (33%), Positives = 156/315 (49%), Gaps = 23/315 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VF GT E AV L+AL++S H +V+V T+P G RG K V S V + A +
Sbjct: 1 MKLVFAGTPEPAVPALEALIASDHDVVAVITRPDARKG-RGRKMVPSPVKEVALAHGIEV 59
Query: 63 LVPTKLGQEEYEQF------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
L PT L + + D VVAYG ++P+ +L+ G+ N H SLLP W
Sbjct: 60 LTPTTLKADTEDGDAIRARLRELAPDAIPVVAYGNLVPKDLLDIAAHGWVNLHFSLLPAW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAP+Q AI AGD+ TG ++++ LDTGP+ I + L + LS AH
Sbjct: 120 RGAAPVQAAINAGDDITGATTFRIEEGLDTGPILGTMTETIQTVDTAGSLLERLSRSGAH 179
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+ MD LE + PQ TYA KI+ + R+++ + + HIRA SPFPGAW
Sbjct: 180 LLQATMDGLESGEIVPQPQ-HGEPTYAPKITTEDARISWTQPDFAIDRHIRAHSPFPGAW 238
Query: 237 LEMMIGNKHERIKLLESQLVEGEG---------KPGE--VINPNFTIACSQGAVRIMRLQ 285
+ +R+K+ + + +PG+ + I + VRI LQ
Sbjct: 239 T----MHGDDRVKIGKVSPLHAAAEALGELPHLEPGQLHITKKAVYIGTASNPVRIDELQ 294
Query: 286 RAGGRVLDIGDFLLG 300
G ++++ D+ G
Sbjct: 295 PVGKKMMNAADWGRG 309
>gi|285019617|ref|YP_003377328.1| methionyl-tRNA formyltransferase [Xanthomonas albilineans GPE PC73]
gi|283474835|emb|CBA17334.1| putative methionyl-trna formyltransferase protein [Xanthomonas
albilineans]
Length = 307
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 168/305 (55%), Gaps = 9/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT +FAV +L+A + H +++VYTQP RPAG RG S V +A +P
Sbjct: 1 MRIVFAGTPDFAVPSLRA-AAQRHEVIAVYTQPDRPAG-RGRGLTPSPVKLEAVARGIPV 58
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P L E Q + D+ VVVAYGL++P+ +L G +N HASLLPRWRGAAP
Sbjct: 59 LQPNTLRAPESLQALRALQPDLMVVVAYGLILPKAVLAIPTHGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETG+ +M+MD LDTGPV ++ PI L L+ L A + +
Sbjct: 119 IQRAIEAGDAETGVCLMQMDASLDTGPVLLSQRTPIDEAETGGQLHDRLAALGARVLSDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ G+TYA K+ K + R+++ +SA ++ +RA +P+P E +
Sbjct: 179 LGLLRAGLRPVAQPQSATGVTYAHKLDKAQARLDWQQSAAHLARQVRAFTPWPV--AEAV 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + R+ + + + +PG ++ IAC QGA+R+ LQR GG+ + D+
Sbjct: 237 LAGERVRVHGAIALDLAHKQQPGTLLTASKQGIDIACGQGALRLRILQREGGKAITAADY 296
Query: 298 LLGCP 302
L
Sbjct: 297 LNARR 301
>gi|226366353|ref|YP_002784136.1| methionyl-tRNA formyltransferase [Rhodococcus opacus B4]
gi|254789366|sp|C1B4K2|FMT_RHOOB RecName: Full=Methionyl-tRNA formyltransferase
gi|226244843|dbj|BAH55191.1| methionyl-tRNA formyltransferase [Rhodococcus opacus B4]
Length = 307
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 101/307 (32%), Positives = 156/307 (50%), Gaps = 9/307 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E AV +L+ L+ S H +V+V T+P AG RG K V S + A +
Sbjct: 1 MRIVFAGTPEPAVPSLERLIRSPRHDVVAVITRPDAVAG-RGRKVVRSPIGALADSHGIE 59
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + + E+ D A VVAYG ++PQ++L+ G+ N H SLLP WRGAA
Sbjct: 60 VLTPERPTEPEFLARLTDLAPDCAPVVAYGALLPQKVLDIPAHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD+ TG + +++ +DTGPV + I L L+ A +
Sbjct: 120 PVQAAIGAGDDMTGASAFRLEAGMDTGPVYGVVTERIRDTDTAGDLLGRLADSGAALLES 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D +E + PQ G+++A K++ R+ + R A V H+R+++P PGAW +
Sbjct: 180 VLDGIEDGAITAVPQPAEGVSHAAKVTVEAARIRWDRPAAVVDRHVRSVTPGPGAWTTIG 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
R+K+ + +PGE+ F I S AVR+ R+Q G + + D+
Sbjct: 240 D----VRLKVGPVTPTDERLEPGEISVTKSGFLIGTSTAAVRLDRVQPQGKKQMAALDWA 295
Query: 299 LGCPVII 305
G +
Sbjct: 296 RGARLDA 302
>gi|326793336|ref|YP_004311156.1| Methionyl-tRNA formyltransferase [Marinomonas mediterranea MMB-1]
gi|326544100|gb|ADZ89320.1| Methionyl-tRNA formyltransferase [Marinomonas mediterranea MMB-1]
Length = 345
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 110/331 (33%), Positives = 174/331 (52%), Gaps = 31/331 (9%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS----SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
LR+VF GT EFA A+LQA++ + + +++VYTQP RPAG RG K V S V + A E
Sbjct: 12 PLRIVFAGTPEFASASLQAVLDNAQENHYEVIAVYTQPDRPAG-RGQKLVASPVKQLALE 70
Query: 58 FSLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
++P P +E + L+ D+ +V AYG+++P+ +L+ +LG N HASLLPRW
Sbjct: 71 NNIPVYQPLNFKLDEDKNALANLNADIMIVAAYGIILPKVVLDTPRLGCVNVHASLLPRW 130
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPI R+++AGD +TGI IM+MD LDTG + + I + L L+ L
Sbjct: 131 RGAAPIHRSLLAGDAKTGITIMQMDVGLDTGDMLLKVECDILEEDTSGTLHDRLAPLGGE 190
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
A++ A+++++ + Q E YA K++K E VN+ SAE++ +R L P+P A+
Sbjct: 191 ALISALEEIKLGTITPEKQDEALTCYAGKLTKTEGEVNWETSAESIARQVRGLHPWPVAY 250
Query: 237 LEMMIGNKHERIKLLESQLVE---------------GEGKPGEVI---NPNFTIACSQGA 278
+ G +K+ + V G+ G +I + S G
Sbjct: 251 TQTESG----VMKIHSATTVNSESIEGINADQVIAAGQSNSGTIIASGKEGVFVQTSNGI 306
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCP---VIIG 306
+ + +Q G+ + + D L G + +G
Sbjct: 307 LALETVQFPSGKRMSVQDALNGKHKASLSVG 337
>gi|312984156|ref|ZP_07791502.1| methionyl-tRNA formyltransferase [Lactobacillus crispatus CTV-05]
gi|310894375|gb|EFQ43451.1| methionyl-tRNA formyltransferase [Lactobacillus crispatus CTV-05]
Length = 314
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 93/311 (29%), Positives = 165/311 (53%), Gaps = 13/311 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
++FMGT +F+V L+ L+ + I +V TQP + G R K S A++ LP
Sbjct: 4 IIFMGTPKFSVPVLKGLIDEGYEIKAVVTQPDKKVG-RKQKITKSPAKIAAEKHDLPIFQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G +E ++ + +AD+ V AYG +P + LN+ K+ N H SLLP++RG APIQ
Sbjct: 63 PVKLSGSDEMQKLIDMHADLIVTAAYGQFLPTKFLNSVKIAAVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETGI IM+M K +D G + + I + N L +LS++ +++ +
Sbjct: 123 YSLINGDKETGITIMEMVKKMDAGDIYAQEAIKIEPDDNAGTLFSKLSIVGRDLLLKTLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ ++ PQ + ++ I+K + ++N +AE ++ IRAL+P PGA+L +
Sbjct: 183 AIIDGSIKKVPQDPEKVVFSPNITKEQEKLNVDMTAEEANDMIRALNPDPGAYLMIEG-- 240
Query: 244 KHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFL 298
+R K+ ++++ G V+ F I+ + + + ++ +Q +G + +DI FL
Sbjct: 241 --KRFKIWKAEIASDSSSLNAGSVVANKGRFAISFADNSVLNLLEVQPSGKKRMDIKSFL 298
Query: 299 L--GCPVIIGC 307
G + G
Sbjct: 299 NGQGSKFVPGE 309
>gi|15837529|ref|NP_298217.1| methionyl-tRNA formyltransferase [Xylella fastidiosa 9a5c]
gi|21542062|sp|Q9PEV1|FMT_XYLFA RecName: Full=Methionyl-tRNA formyltransferase
gi|9105850|gb|AAF83737.1|AE003932_1 methionyl-tRNA formyltransferase [Xylella fastidiosa 9a5c]
Length = 307
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 169/305 (55%), Gaps = 9/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT +FAV +L+++ +V+VYTQP RPAG RG + S V +A LP
Sbjct: 1 MRIVFAGTPDFAVPSLRSVTQR-ADVVAVYTQPDRPAG-RGRELTPSPVKLEAVARGLPV 58
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E + + D+ VVVAYG+++P+ +L G +N HASLLPRWRGAAP
Sbjct: 59 YQPQTLRSPEMLEQLRALRPDLIVVVAYGVILPEAVLAIPDDGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETG+ +M+M+ LDTGPV K PI++ + L L+ + A + +
Sbjct: 119 IQRAIEAGDTETGVCLMQMEAGLDTGPVLMSLKTPINAYETSGQLHDRLAEMGAQLLSDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ+ G+TYA K+ K E ++++ + AE + +RA P+P E++
Sbjct: 179 LGLLRAGLRPVPQPQLAAGVTYAHKLGKVEAQLDWEQPAERLACRVRAFQPWPV--AEVV 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + RI + ++ PG V+ +AC QGA+R+ RLQR GG+ + D+
Sbjct: 237 LCGERVRIHEALALDLDHSQPPGTVLAASKEGIDVACLQGALRLCRLQREGGKAITAADY 296
Query: 298 LLGCP 302
L
Sbjct: 297 LNARR 301
>gi|45657425|ref|YP_001511.1| methionyl-tRNA formyltransferase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|294828098|ref|NP_712577.2| methionyl-tRNA formyltransferase [Leptospira interrogans serovar
Lai str. 56601]
gi|59797587|sp|Q72S34|FMT_LEPIC RecName: Full=Methionyl-tRNA formyltransferase
gi|73919403|sp|Q8F3K6|FMT_LEPIN RecName: Full=Methionyl-tRNA formyltransferase
gi|45600664|gb|AAS70148.1| methionyl-tRNA formyltransferase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|293385945|gb|AAN49595.2| methionyl-tRNA formyltransferase [Leptospira interrogans serovar
Lai str. 56601]
Length = 315
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 86/316 (27%), Positives = 144/316 (45%), Gaps = 9/316 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++ + GT E + L+AL+ S ++ V T P RP G R V KKA E+++P
Sbjct: 1 MKIGYFGTPEHSAKLLEALIDSQLTEVLFVVTNPDRPKG-RSKIPEPGPVKKKALEYNIP 59
Query: 62 ALVPTKLGQEEYEQFLSF---NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ +E+ + F +AD+ VV AYG ++P+ + + L N H SLLP RG
Sbjct: 60 VFQYESIKKEKEKALSDFGLFSADLYVVFAYGSILPKEVYAHSTLTSINLHGSLLPDLRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+P+Q A+ G +TGI I + + +D G + ++V I+ NT L +++ ++
Sbjct: 120 ASPVQTALWKGYTKTGITIQYIGEKMDEGDILLTKEVEIAPEDNTGTLMDKITDAGIESI 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + + P PQ + TY KI + +++ +E +HN IRAL P A
Sbjct: 180 LQLLKTYDGKPFPSVPQAHDKATYCGKIKSEDRILDWSLKSEELHNRIRALYPDMIATTT 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEV---INPNFTIACSQG-AVRIMRLQRAGGRVLDI 294
+ S +E PG++ C G + I+ LQ +
Sbjct: 240 FRDKRMNILKTKPSSLSLEINPTPGKLKRLDKKRLLTQCGDGRFLEILELQPENKNRMTA 299
Query: 295 GDFLLGCPVIIGCIVG 310
DFL G + G G
Sbjct: 300 SDFLNGFRIQEGETFG 315
>gi|256849781|ref|ZP_05555212.1| methionyl-tRNA formyltransferase FMT [Lactobacillus crispatus
MV-1A-US]
gi|262046520|ref|ZP_06019481.1| methionyl-tRNA formyltransferase [Lactobacillus crispatus MV-3A-US]
gi|256713270|gb|EEU28260.1| methionyl-tRNA formyltransferase FMT [Lactobacillus crispatus
MV-1A-US]
gi|260572969|gb|EEX29528.1| methionyl-tRNA formyltransferase [Lactobacillus crispatus MV-3A-US]
Length = 314
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 94/311 (30%), Positives = 166/311 (53%), Gaps = 13/311 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
++FMGT +F+V L+ L+ + I +V TQP + G R K S A++ LP
Sbjct: 4 IIFMGTPKFSVPVLEGLIDEGYEIKAVVTQPDKKVG-RKQKITKSPAKIAAEKHDLPIFQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G +E ++ + +AD+ V AYG +P + LN+ K+ N H SLLP++RG APIQ
Sbjct: 63 PVKLSGSDEMQKLIDMHADLIVTAAYGQFLPTKFLNSVKIAAVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETGI IM+M K +D G + + I + N L +LS++ +++ +
Sbjct: 123 YSLINGDKETGITIMEMVKKMDAGDIYAQEAIKIEPDDNAGTLFSKLSIVGRDLLLKTLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ ++ PQ + ++ I+K + ++N +AE V++ IRAL+P PGA+L +
Sbjct: 183 AIIDGSIKKVPQDPEKVVFSPNITKEQEKLNVDMTAEEVNDMIRALNPDPGAYLMIEG-- 240
Query: 244 KHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFL 298
+R K+ ++++ G V+ F I+ + + + ++ +Q +G + +DI FL
Sbjct: 241 --KRFKIWKAEIASDSSSLNAGSVVANKGRFAISFADNSVLNLLEVQPSGKKRMDIKSFL 298
Query: 299 L--GCPVIIGC 307
G + G
Sbjct: 299 NGQGSKFVPGE 309
>gi|256843397|ref|ZP_05548885.1| methionyl-tRNA formyltransferase [Lactobacillus crispatus
125-2-CHN]
gi|293380311|ref|ZP_06626385.1| methionyl-tRNA formyltransferase [Lactobacillus crispatus 214-1]
gi|256614817|gb|EEU20018.1| methionyl-tRNA formyltransferase [Lactobacillus crispatus
125-2-CHN]
gi|290923126|gb|EFE00055.1| methionyl-tRNA formyltransferase [Lactobacillus crispatus 214-1]
Length = 314
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 93/311 (29%), Positives = 165/311 (53%), Gaps = 13/311 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
++FMGT +F+V L+ L+ + I +V TQP + G R K S A++ LP
Sbjct: 4 IIFMGTPKFSVPVLEGLIDEGYEIKAVVTQPDKKVG-RKQKITKSPAKIAAEKHDLPIFQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G +E ++ + +AD+ V AYG +P + LN+ K+ N H SLLP++RG APIQ
Sbjct: 63 PVKLSGSDEMQKLIDMHADLIVTAAYGQFLPTKFLNSVKIAAVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETGI IM+M K +D G + + I + N L +LS++ +++ +
Sbjct: 123 YSLINGDKETGITIMEMVKKMDAGDIYAQEAIKIEPDDNAGTLFSKLSIVGRDLLLKTLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ ++ PQ + ++ I+K + ++N +AE ++ IRAL+P PGA+L +
Sbjct: 183 AIIDGSIKKVPQDPEKVVFSPNITKEQEKLNVDMTAEEANDMIRALNPDPGAYLMIEG-- 240
Query: 244 KHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFL 298
+R K+ ++++ G V+ F I+ + + + ++ +Q +G + +DI FL
Sbjct: 241 --KRFKIWKAEIASDSSSLNAGSVVANKGRFAISFADNSVLNLLEVQPSGKKRMDIKSFL 298
Query: 299 L--GCPVIIGC 307
G + G
Sbjct: 299 NGQGSKFVPGE 309
>gi|157825412|ref|YP_001493132.1| methionyl-tRNA formyltransferase [Rickettsia akari str. Hartford]
gi|157799370|gb|ABV74624.1| methionyl-tRNA formyltransferase [Rickettsia akari str. Hartford]
Length = 298
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 99/305 (32%), Positives = 159/305 (52%), Gaps = 11/305 (3%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT EFAV L+ L+ H + V+TQ P+ G RGL V S +H+ A E +P P+
Sbjct: 1 MGTPEFAVPALKKLI-MHHEVKVVFTQQPKAKG-RGLDLVKSPIHQLAFEHQIPVYTPST 58
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
+ NAD+ VV+AYG ++P+ IL K G N H S LPR RGAAP+QR I
Sbjct: 59 LRNDDIVNLINKINADIIVVIAYGFILPKAILEDKKYGCLNIHPSDLPRHRGAAPLQRTI 118
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ GD ++ + IM+MD +DTG + + L + + L A ++ + ++
Sbjct: 119 IEGDRKSSVCIMRMDTGIDTGDILMKEDFYLERRTTLEELHNKCANLGAALLIRTLANID 178
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
Q G+TYA K++K E ++N+ SA + IR ++P+PGA+ +
Sbjct: 179 NI--VPIKQSSEGVTYANKLTKEEGKINWHESAYKIDCKIRGMNPWPGAYFSY----NDK 232
Query: 247 RIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVI 304
IK+LE++ + G VI+ IAC G +++ +LQ+ + L++ +FL G ++
Sbjct: 233 VIKILEAEYLNTNHHVTAGTVISDKLEIACGSGILQVKKLQQESKKALNVEEFLRGTNIL 292
Query: 305 IGCIV 309
I+
Sbjct: 293 KATIL 297
>gi|299768270|ref|YP_003730296.1| methionyl-tRNA formyltransferase [Acinetobacter sp. DR1]
gi|298698358|gb|ADI88923.1| methionyl-tRNA formyltransferase [Acinetobacter sp. DR1]
Length = 320
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 110/320 (34%), Positives = 165/320 (51%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL+ +SH I++VYTQP R AG RG K S V + A E +P
Sbjct: 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAG-RGQKLTPSPVKQLALEHGIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + DV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 YQPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQAVLDMPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD ETGI IM+M LDTG + + PI++ +A L +L+ A
Sbjct: 120 RGAAPIQRAIATGDEETGITIMQMAAGLDTGDMMYKTYCPITAEDTSATLHDKLAAQGAT 179
Query: 177 AMVEAMDKLE---QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ + ++ E + Q E+ YA K+ K E R+++ A + +IRA +P+P
Sbjct: 180 AICDVLESEETLKKYLAEREVQDESLTVYAHKLVKSEARIDWSNDAVQLDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGG 289
A++++ N S + + GE+I +AC Q + + + +Q GG
Sbjct: 240 VAFIQLDENNALRVWNSTTSTQNQANAQAGEIIAIDKQGVHVACGQNSFICLTSVQWPGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ ++ + +G I+
Sbjct: 300 KAMNAQQIAQTQKLHVGQIL 319
>gi|227510467|ref|ZP_03940516.1| methionyl-tRNA formyltransferase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190119|gb|EEI70186.1| methionyl-tRNA formyltransferase [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 314
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 99/313 (31%), Positives = 168/313 (53%), Gaps = 14/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
VVFMGT F V L+ LV + +++ TQP RP G R + S V ++A+ ++P L
Sbjct: 4 VVFMGTPSFGVPVLKGLVDQGYQVLAAVTQPDRPVG-RKHQIQKSPVKQQAEALNIPVLQ 62
Query: 65 PTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K+ + Q + + D+ V A+G +P ++LNA K+ N H SLLP++RG AP+Q
Sbjct: 63 PEKISGSDEMQQLIEMHPDLIVTAAFGQFLPTKLLNAVKIAAVNVHGSLLPKYRGGAPVQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
AI+ GD ETGI+I+ M K +D G + + +PI++ +TA + +LS++ +++ +
Sbjct: 123 YAILNGDKETGISIIYMVKKMDAGDILAQQAIPINNTDDTASMFAKLSLVGRDLLLKTLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ + Q + ++ I E +++F +SA V +RAL P P A+ +
Sbjct: 183 KVISGEITPIKQDPEKVIFSPTIKPEEEKLDFLKSAFLVDAKVRALRPDPTAYTTL---- 238
Query: 244 KHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAV-RIMRLQRAGGRVLDIGDF 297
+R K+ +S +V+G+ +PG ++ IA G++ I+ LQ AG I D+
Sbjct: 239 NGKRTKIWKSAVVDGQTPLEPGVIVEKTKHQLQIAAGGGSILEILELQPAGKPRQAITDY 298
Query: 298 LLGCP--VIIGCI 308
L G + +G
Sbjct: 299 LNGAGQALKVGQK 311
>gi|290893048|ref|ZP_06556037.1| methionyl-tRNA formyltransferase [Listeria monocytogenes FSL
J2-071]
gi|290557408|gb|EFD90933.1| methionyl-tRNA formyltransferase [Listeria monocytogenes FSL
J2-071]
Length = 312
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 102/318 (32%), Positives = 164/318 (51%), Gaps = 15/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L L +S++ +V+V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPEFSVPVLTQL-ASTYDVVAVVTQPDRPVG-RKRVLTPPPVKKAALELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E E+ ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSKLGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ +T+A IS+ + ++++ + + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITAIPQDPEKVTFARNISREQEKIDWTKPGRTIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLES--QLVEGEGKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDI 294
+ K+ E+ + +G G+PG ++ I G + + +Q AG +DI
Sbjct: 238 EE----KPFKIWEATYEETKGSGEPGAILADKTTLKIVAGDGTLIVPTVIQPAGKPKMDI 293
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 294 HSFMSGAGRNLSKTTRFG 311
>gi|15643294|ref|NP_228338.1| methionyl-tRNA formyltransferase [Thermotoga maritima MSB8]
gi|6685431|sp|Q9WYZ8|FMT_THEMA RecName: Full=Methionyl-tRNA formyltransferase
gi|4981041|gb|AAD35613.1|AE001728_14 methionyl-tRNA formyltransferase [Thermotoga maritima MSB8]
Length = 313
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 100/312 (32%), Positives = 163/312 (52%), Gaps = 10/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF+GT EFA L+ L+ + ++V V TQP +P G RG K + V A++ +P
Sbjct: 1 MRIVFVGTPEFAAEILEHLIKNGFNVVGVVTQPDKPRG-RGRKVAPTPVKAVAEKHEVPF 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P + ++E E S DV +V +YG ++ +++L+ +LG YN H SLLP++RGA+P
Sbjct: 60 IQPESINKKEALEFLRSVRPDVIIVASYGKILGEKVLSLPRLGCYNIHPSLLPKYRGASP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQR + G+ TG+ I KM K LD GP+A +++ + L++ L L ++E
Sbjct: 120 IQRVLENGEERTGVTIYKMVKELDAGPIALQKEISVDPFETFDQLEKRLIELSKEMLIEF 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++KL+ N+ L Q + TYA I K + V+F + AE+V N IRA PGA +
Sbjct: 180 LEKLKTGNIELKEQDHSRATYAPMIKKEDLIVDFSKDAESVKNKIRAYDSRPGARAFLGN 239
Query: 242 GNKHERIKLLESQLVEGEG-KPGE---VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+KL ++ G +PG + I G V++ +Q G + + +
Sbjct: 240 VE----VKLFGVTAIDSSGDEPGLINYIDREGAWIGTGDGKVKVRYIQFPGKKKMTFWEA 295
Query: 298 LLGCPVIIGCIV 309
G +I G
Sbjct: 296 KNGRLIIEGMRF 307
>gi|289664807|ref|ZP_06486388.1| methionyl-tRNA formyltransferase [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 307
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 168/305 (55%), Gaps = 9/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT +FAVA+L+A + H +V+VYTQP RPAG RG S V +A +P
Sbjct: 1 MRIIFAGTPDFAVASLRA-AAQRHEVVAVYTQPDRPAG-RGRGLTPSPVKIEAIARGIPV 58
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E S NAD+ VVVAYGL++P+ +L A G +N HASLLPRWRGAAP
Sbjct: 59 FQPQTLRSPEALATLRSLNADLMVVVAYGLILPKAVLAAPTHGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETG+ +M+M+ LDTGPV +++ I L L+ L A + +
Sbjct: 119 IQRAIEAGDTETGVCLMQMEAGLDTGPVLLSQRIEIGEQETGGQLHDRLAALGAQVLSDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ G+TYA K+ K + R+++ + A+ + +RA +P+P E +
Sbjct: 179 LGLLRAGIRPVAQPQPAEGVTYAHKLDKAQARLDWAQPAQELARRVRAFNPWPV--AEAI 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + R+ + + + PG ++ IAC +GA+R+ LQR GG+ + D+
Sbjct: 237 LAGERVRLHGAVALELAHQQPPGTLLAASKQGIDIACGEGALRVRVLQREGGKAITAADY 296
Query: 298 LLGCP 302
L
Sbjct: 297 LNARR 301
>gi|172062104|ref|YP_001809756.1| methionyl-tRNA formyltransferase [Burkholderia ambifaria MC40-6]
gi|238689146|sp|B1YPX6|FMT_BURA4 RecName: Full=Methionyl-tRNA formyltransferase
gi|171994621|gb|ACB65540.1| methionyl-tRNA formyltransferase [Burkholderia ambifaria MC40-6]
Length = 327
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 124/321 (38%), Positives = 177/321 (55%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +P
Sbjct: 4 TLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYAVEHGIP 62
Query: 62 ALVPTKLGQEEYEQFLS---------FNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPGEAADAIELLRTTPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + +V I+ + TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIEEARVAIAPDDTTATLHDRLAA 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V+A+ +LE++ P +PQ +G+TYAEKI K E +++ + A+ + +RA P
Sbjct: 183 DGARLIVDALVRLERDGALPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ E G+ PG +++ +AC GA+R+ +LQ+ G
Sbjct: 243 FPGGVATL--DGAAIKLWAAEPVAARGDAVPGTIVDAAPEGVIVACGSGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ G
Sbjct: 301 GKRLPAREFLAGSPLAAGQRF 321
>gi|118468625|ref|YP_887380.1| methionyl-tRNA formyltransferase [Mycobacterium smegmatis str. MC2
155]
gi|166215483|sp|A0QWU2|FMT_MYCS2 RecName: Full=Methionyl-tRNA formyltransferase
gi|118169912|gb|ABK70808.1| methionyl-tRNA formyltransferase [Mycobacterium smegmatis str. MC2
155]
Length = 312
Score = 160 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 101/308 (32%), Positives = 155/308 (50%), Gaps = 6/308 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+ +L+ L+ S H +V+V T+P AGRRG K S V + A E +P
Sbjct: 1 MRLVFAGTPEPALPSLRRLIESPRHDVVAVLTRPDAAAGRRG-KPRPSPVAQLALEHGIP 59
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + +E+ D VVAYG ++ QR+L + G+ N H SLLP WRGAA
Sbjct: 60 LLRPDRPNSDEFVAELTELAPDCCAVVAYGALLSQRLLAVPRHGWINLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG +++ LD+GPV + + L + LS A +
Sbjct: 120 PVQAAIAAGDTVTGATTFQIEPALDSGPVYGVVTETVRDTDTAGDLLERLSDSGAELLER 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM- 239
+D + +L PQ GIT A KI+ RV + A V IRA++P PGAW +
Sbjct: 180 TIDGIADGSLTAVPQPSEGITVAPKITVESARVRWDLPAHVVDRRIRAVTPNPGAWTMIG 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ K + + ++ +G PGE+ + + VR+ ++Q G ++++ D+
Sbjct: 240 ELRVKVGPVTVDQAAEADGPLAPGEIRVGRNSVHVGTGSHPVRLGQIQPPGKKLMNAADW 299
Query: 298 LLGCPVII 305
G +
Sbjct: 300 ARGARLEE 307
>gi|88803466|ref|ZP_01118992.1| methionyl-tRNA formyltransferase [Polaribacter irgensii 23-P]
gi|88781032|gb|EAR12211.1| methionyl-tRNA formyltransferase [Polaribacter irgensii 23-P]
Length = 306
Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 90/298 (30%), Positives = 149/298 (50%), Gaps = 5/298 (1%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +FAVA L+ L+++++ IV V T P + AG RG K SAV K A +LP L P
Sbjct: 1 MGTPDFAVAILKHLITNNYKIVGVITAPDKAAG-RGRKLNESAVKKYAVSQNLPILQPQN 59
Query: 68 LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127
L E++ + L +V ++P+ + LG +N HASLLP +RGAAPI +I+
Sbjct: 60 LKNEDFLKELKILNANLQIVVAFRMLPEVVWKMPALGTFNLHASLLPAYRGAAPIHWSII 119
Query: 128 AGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQ 187
G+ +TG+ +D +DTG + ++ I L +L + A + +D +
Sbjct: 120 NGETKTGVTTFFIDDKIDTGEIILQEEMGILKTETVGTLHDKLMQIGATLVSNTIDLIGT 179
Query: 188 NNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHER 247
NL Q + A K++ T +N+ S + ++N IR L+PFP AW ++ +
Sbjct: 180 GNLKTIKQPDLEEKSAPKLNSENTNINWNDSLDAIYNKIRGLNPFPAAWCTLINNEERIL 239
Query: 248 IKLLESQLVE--GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+K+ E + E G+++ IA +G + I ++ +G + +D L G
Sbjct: 240 VKIYEVKKEEEYHNFANGKILATKKELKIAVPEGFIIIEEIKLSGKKKMDAKSLLNGY 297
>gi|313205323|ref|YP_004043980.1| methionyL-tRNA formyltransferase [Paludibacter propionicigenes WB4]
gi|312444639|gb|ADQ80995.1| methionyl-tRNA formyltransferase [Paludibacter propionicigenes WB4]
Length = 312
Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 98/313 (31%), Positives = 161/313 (51%), Gaps = 13/313 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAVA+L+ LV + + +V V T P +PAG RG K SAV + A E +L
Sbjct: 1 MRIVFMGTPDFAVASLKILVENKYDVVGVITMPDKPAG-RGHKVQYSAVKQYALEQNLRL 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E + + L +V ++P+ + + K G +N HASLLP++RGAAPI
Sbjct: 60 LQPEKLRDEAFLEELRSLQADLQIVVAFRMLPEVVWDMPKYGTFNLHASLLPQYRGAAPI 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ GD ETG + +DTG + K+ I+ N + +L + A + + +
Sbjct: 120 NWAIINGDKETGATTFFLTHEIDTGKIIQQEKIAIAETDNAGIVHDKLMEMGAKLVKKTV 179
Query: 183 DKLEQNNLPLSPQIENGI-----TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
D L + + Q + A KI K +++ E V+N +R LSP+P AW+
Sbjct: 180 DMLIEGKIDAVDQAQFIHSGVELKAAPKIFKETCQIDLLWGVERVYNFVRGLSPYPAAWV 239
Query: 238 EMMIGNKHERI--KLLESQL--VEGEGKPGEVINPNF---TIACSQGAVRIMRLQRAGGR 290
E+ + E + K+ E++ + + G ++ IA + G +++ +Q G +
Sbjct: 240 ELQFPGQAETVVLKVYETEKEFEKHDLAVGTIVTDGKKSAKIALTDGFIQLKSVQAPGKK 299
Query: 291 VLDIGDFLLGCPV 303
++IG+ L G
Sbjct: 300 RMEIGELLRGMRF 312
>gi|317165347|gb|ADV08888.1| Fmt [Neisseria gonorrhoeae TCDC-NG08107]
Length = 320
Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 121/314 (38%), Positives = 173/314 (55%), Gaps = 11/314 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 12 AMKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLR 70
Query: 62 ALVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGA
Sbjct: 71 VAQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGA 130
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 131 APIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVV 190
Query: 180 EAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ +L+ Q E G+TYA+K+SK E R+++ SA+ + IRA +P P AW+E
Sbjct: 191 ADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSESADIIERKIRAFNPVPAAWVE 250
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 251 YQG----KPMKIRRAEVVAQQGTAGEVLSCSADGLVVACGESALKITELQPAGGRRMNIA 306
Query: 296 DFLLGCPVIIGCIV 309
F G + G +
Sbjct: 307 AFAAGRSIEAGAKL 320
>gi|256392285|ref|YP_003113849.1| methionyl-tRNA formyltransferase [Catenulispora acidiphila DSM
44928]
gi|256358511|gb|ACU72008.1| methionyl-tRNA formyltransferase [Catenulispora acidiphila DSM
44928]
Length = 315
Score = 160 bits (403), Expect = 4e-37, Method: Composition-based stats.
Identities = 96/310 (30%), Positives = 156/310 (50%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT E A+ +L+AL+ S H +V+V T+P +G RG + S + + A+E +
Sbjct: 1 MRVLFAGTPEPALPSLRALLDSRHEVVAVLTRPDARSG-RGRRMEASPIAQLAEEAGVEV 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K+ + E+ + D +VAYG +IP+ L+ + G+ N H SLLP WRGAAP
Sbjct: 60 LKPEKVRDPAFLERLAAIAPDCCPIVAYGGLIPKSALDVPRHGWVNLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q+A++ GD TG + +++ LDTGPV I + L L+ + +
Sbjct: 120 VQQALLHGDEITGASTFLLEEGLDTGPVYGTVTDEIRRTDTSGDLLARLAESGSRLLTAT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D +E PQ G+T A K+ + R+++ A V IRA +P PGAW +
Sbjct: 180 LDAIEDGTARPVPQPAEGVTLAPKVLATDARIDWTAPALRVDRLIRACTPAPGAWTVLPG 239
Query: 242 GNKHE--RIKLLESQLVEGEGK--PGEVINP--NFTIACSQG-AVRIMRLQRAGGRVLDI 294
+ E R+K+ + G + PG ++ T+ G VR+ +Q G R +
Sbjct: 240 VDGEEDLRVKIFPVTALPGTTEVPPGRIVQDSRGLTVGTGSGHTVRLGDVQPQGKRRMPA 299
Query: 295 GDFLLGCPVI 304
D+ G +
Sbjct: 300 ADWARGLRLT 309
>gi|296327796|ref|ZP_06870335.1| methionyl-tRNA formyltransferase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296155143|gb|EFG95921.1| methionyl-tRNA formyltransferase [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 317
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 86/315 (27%), Positives = 160/315 (50%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT FAV +L+ + H I+SV+T+ +P RG K S + + A L
Sbjct: 8 MKIIFMGTPTFAVPSLEKIYK-EHEIISVFTKVDKP-NARGKKINYSPIKEFALANDLKI 65
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E+ + AD+ VVVAYG ++P+ I++ K G N H+SLLPR+RGAAP
Sbjct: 66 YQPENFKDSTLIEEIRNMQADLIVVVAYGKILPKEIIDIPKYGVINLHSSLLPRFRGAAP 125
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD ++G++IM +++ LD G V + IS L L + A +++A
Sbjct: 126 INAAIINGDTKSGVSIMYVEEELDAGDVILQEETEISDEDTFLSLHDRLKDMGADLLLKA 185
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ +++ + Q + +T+ + K + ++++ +++ + N IR ++P P A+ +
Sbjct: 186 IELIKKGEVKAQKQDKKLVTFVKPFRKEDCKIDWTKTSREIFNFIRGMNPIPTAFSNLNG 245
Query: 242 GNKHERIKLLESQLVE---GEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDI 294
IK+ E+++ + GEV+ + S G++ I + + +
Sbjct: 246 T----IIKIYETKINDKVYNNATCGEVVEYLKGKGIVVKTSDGSLIISSAKPENKKQMSG 301
Query: 295 GDFLLGCPVIIGCIV 309
D + G + IG +
Sbjct: 302 VDLINGKFLKIGEKL 316
>gi|260101421|ref|ZP_05751658.1| methionyl-tRNA formyltransferase [Lactobacillus helveticus DSM
20075]
gi|260084761|gb|EEW68881.1| methionyl-tRNA formyltransferase [Lactobacillus helveticus DSM
20075]
Length = 308
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 96/308 (31%), Positives = 167/308 (54%), Gaps = 13/308 (4%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT EF+V L+ L+ +++ I +V TQP + G R K + A++ LP P K
Sbjct: 1 MGTPEFSVPVLEGLIKNNYEIKAVVTQPDKKVG-RKQKITKTPAKIAAEKHGLPVFQPVK 59
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
G EE +Q + +AD+ V AYG +P + L + K+ N H SLLP++RG APIQ ++
Sbjct: 60 LSGSEEMQQVIDMHADLIVTAAYGQFLPTKFLKSVKIAAVNVHGSLLPKYRGGAPIQYSL 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ GD ETGI IM+M K +D G + + + I + N L +LS++ ++E + +
Sbjct: 120 INGDAETGITIMEMVKKMDAGDIYSQKAIKIEPDDNAGTLFSKLSIVGRDLLLETLPSII 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
++ PQ + + ++ I+K + R+ +A +N IRAL+P PGA++ + +
Sbjct: 180 DGSIKKIPQDPDKVVFSPNITKEQERIGPTMTATEANNMIRALNPDPGAYMMLEG----K 235
Query: 247 RIKLLESQLVE--GEGKPGEVI--NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLL-- 299
R K+ ++++ + + KPG V+ F I+ + G + ++ +Q +G + +DI +FL
Sbjct: 236 RFKVWKAEVAKDSTDLKPGCVVANKGRFAISFADGTVLNLLEVQPSGKKKMDIKNFLNGQ 295
Query: 300 GCPVIIGC 307
G G
Sbjct: 296 GSKFAPGE 303
>gi|74316033|ref|YP_313773.1| methionyl-tRNA formyltransferase [Thiobacillus denitrificans ATCC
25259]
gi|123773114|sp|Q3SMS3|FMT_THIDA RecName: Full=Methionyl-tRNA formyltransferase
gi|74055528|gb|AAZ95968.1| methionyl-tRNA formyltransferase [Thiobacillus denitrificans ATCC
25259]
Length = 309
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 131/315 (41%), Positives = 176/315 (55%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT FA A L+ALV++ H IV V TQP RPAG RG+K SAV + A LP
Sbjct: 1 MRVIFAGTPPFAAAALEALVAAGHEIVLVLTQPDRPAG-RGMKLAASAVKQAALAHGLPV 59
Query: 63 LVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
PT L E + L+ ADV VV AYGL++PQ +L+ +LG N HASLLPRWRGAAP
Sbjct: 60 YQPTTLKTPEAQARLADCAADVMVVAAYGLILPQAVLDLPRLGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+AGD ETGI IM+M LDTG + VPI+ A L L+V A A+V A
Sbjct: 120 IQRAILAGDCETGITIMQMAAGLDTGAMLAKTVVPIADADTAATLHDALAVAGAAAIVSA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + Q E +YA K+SK E R+++ + AE + +RA +P PGAW +
Sbjct: 180 LSAYDTLVPQT--QDEREASYAAKLSKEEARLDWQQPAEALARAVRAFNPVPGAWTLLAG 237
Query: 242 GNKHERIKLLESQLV---EGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
K+L ++ E + PG V+ +AC GA+ + +Q AG + +
Sbjct: 238 APF----KILRAEAAPQGEADAPPGTVLRADPAGIVVACGGGALVLHEIQAAGSKRMTAA 293
Query: 296 DFLLGCPVIIGCIVG 310
FL G + G +G
Sbjct: 294 AFLAGRALSAGTRLG 308
>gi|300115537|ref|YP_003762112.1| methionyl-tRNA formyltransferase [Nitrosococcus watsonii C-113]
gi|299541474|gb|ADJ29791.1| methionyl-tRNA formyltransferase [Nitrosococcus watsonii C-113]
Length = 323
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 111/310 (35%), Positives = 164/310 (52%), Gaps = 8/310 (2%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
+VF GT FA L+ L+ + + I +VYTQP RP+G RG + V S V A LP
Sbjct: 7 IVFAGTPVFAAVALRRLLETGYRIGAVYTQPDRPSG-RGRRLVPSPVKDIAITHQLPLYQ 65
Query: 65 PTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P L + + L+ D+ VV AYGL++P +L LG N HASLLPRWRGAAPIQ
Sbjct: 66 PATLKDKASQTQLAALAPDLMVVAAYGLILPTAVLQIPPLGCINIHASLLPRWRGAAPIQ 125
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
RA++AGD ETGI+IM+MD LDTGPV + PI A + +L+ L A A+++ +
Sbjct: 126 RALLAGDKETGISIMQMDAGLDTGPVLHTARYPIQPKDTAAIVHDQLAELGAEALLQCLP 185
Query: 184 KLEQNNLPLSP-QIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
L + + Q E+ YA KI K E +++ + A + +RA +P+P A ++
Sbjct: 186 SLLEKKANTAVLQDESRACYAPKIRKEEAWLDWSQPAIFLERQVRAFNPWPVAQTQIE-- 243
Query: 243 NKHERIKLLESQLVEGEGKPGE---VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ R+ + PG V IA G +R++ +Q AG RV+ + +L
Sbjct: 244 GRILRVWSATALAKTTHVLPGTLLAVHKTGIDIATGNGTLRLLEVQPAGKRVMTVQAYLS 303
Query: 300 GCPVIIGCIV 309
+ G ++
Sbjct: 304 AHLLTPGTVL 313
>gi|291457415|ref|ZP_06596805.1| methionyl-tRNA formyltransferase [Bifidobacterium breve DSM 20213]
gi|291381250|gb|EFE88768.1| methionyl-tRNA formyltransferase [Bifidobacterium breve DSM 20213]
Length = 337
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 101/332 (30%), Positives = 154/332 (46%), Gaps = 30/332 (9%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT + AV +LQA S +V V T+P P G RG K S V A E L
Sbjct: 2 LKLVFAGTPDVAVPSLQAFAADSRFEVVGVITRPDAPTG-RGRKLTPSPVKAAAVELGLT 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ E E +AD+A V+AYG ++P+ +L+A +G+YN H S LP+WRGAAP
Sbjct: 61 VIDAKPHSPEFMEALKGLHADIAAVIAYGNILPKSVLDAVPMGWYNLHFSNLPKWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
QRAI GD TG + K+ + LD GP+ + ++ + L L+ A V+A
Sbjct: 121 AQRAIWNGDPTTGADVFKVGEGLDDGPIIASLTIELTGRETSGELLARLAEEGAPMYVDA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + +PQ G+ YA KI+ + R+N+ AE + IRA +P PGAW E+
Sbjct: 181 LAAVGSGTAVFTPQPAEGLEYAHKITVEDARINWADPAEAIDRQIRACTPHPGAWTELFA 240
Query: 242 GN-------------------KHERIKLLESQLVEGEGK-------PGE--VINPNFTIA 273
K + +L +Q + PGE V N +
Sbjct: 241 EGLIADSGEANEESSNLATTAKSLTLHILAAQPADQTNPNTPIDLDPGELKVGKKNVWVG 300
Query: 274 CSQGAVRIMRLQRAGGRVLDIGDFLLGCPVII 305
GA+ + +++ G + + D+ G +
Sbjct: 301 TGTGALELTQVKAQGKKAMRAADWARGARLSP 332
>gi|194099886|ref|YP_002003023.1| Fmt [Neisseria gonorrhoeae NCCP11945]
gi|239997892|ref|ZP_04717816.1| Fmt [Neisseria gonorrhoeae 35/02]
gi|240015127|ref|ZP_04722040.1| Fmt [Neisseria gonorrhoeae DGI18]
gi|240017577|ref|ZP_04724117.1| Fmt [Neisseria gonorrhoeae FA6140]
gi|240081719|ref|ZP_04726262.1| Fmt [Neisseria gonorrhoeae FA19]
gi|240113995|ref|ZP_04728485.1| Fmt [Neisseria gonorrhoeae MS11]
gi|240122198|ref|ZP_04735160.1| Fmt [Neisseria gonorrhoeae PID24-1]
gi|240124491|ref|ZP_04737447.1| Fmt [Neisseria gonorrhoeae PID332]
gi|240124640|ref|ZP_04737526.1| Fmt [Neisseria gonorrhoeae SK-92-679]
gi|240129166|ref|ZP_04741827.1| Fmt [Neisseria gonorrhoeae SK-93-1035]
gi|254494752|ref|ZP_05107923.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae 1291]
gi|268593744|ref|ZP_06127911.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae 35/02]
gi|268597817|ref|ZP_06131984.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae FA19]
gi|268600060|ref|ZP_06134227.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae MS11]
gi|268683122|ref|ZP_06149984.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae PID332]
gi|268683214|ref|ZP_06150076.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae SK-92-679]
gi|268687549|ref|ZP_06154411.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae SK-93-1035]
gi|293398235|ref|ZP_06642440.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae F62]
gi|238693219|sp|B4RPX5|FMT_NEIG2 RecName: Full=Methionyl-tRNA formyltransferase
gi|193935176|gb|ACF31000.1| Fmt [Neisseria gonorrhoeae NCCP11945]
gi|226513792|gb|EEH63137.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae 1291]
gi|268547133|gb|EEZ42551.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae 35/02]
gi|268551605|gb|EEZ46624.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae FA19]
gi|268584191|gb|EEZ48867.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae MS11]
gi|268623406|gb|EEZ55806.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae PID332]
gi|268623498|gb|EEZ55898.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae SK-92-679]
gi|268627833|gb|EEZ60233.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae SK-93-1035]
gi|291611498|gb|EFF40568.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae F62]
Length = 308
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 121/313 (38%), Positives = 173/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 AQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+SK E R+++ SA+ + IRA +P P AW+E
Sbjct: 180 DLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSESADIIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 240 QG----KPMKIRRAEVVAQQGTAGEVLSCSADGLVVACGESALKITELQPAGGRRMNIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G + G +
Sbjct: 296 FAAGRSIEAGAKL 308
>gi|319649621|ref|ZP_08003777.1| methionyl-tRNA formyltransferase [Bacillus sp. 2_A_57_CT2]
gi|317398783|gb|EFV79465.1| methionyl-tRNA formyltransferase [Bacillus sp. 2_A_57_CT2]
Length = 298
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 95/298 (31%), Positives = 158/298 (53%), Gaps = 13/298 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT +F+V L+ ++ + ++ V TQP RP G R V +A++ +
Sbjct: 1 MT-KIVFMGTPDFSVPVLKQIIEDGYEVIGVVTQPDRPVG-RKKVLTPPPVKVEAEKQGI 58
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K+ Q E E+ L+ D+ V A+G ++P+ +L+A K G N HASLLP RG
Sbjct: 59 PVYQPEKIRQPEELEKVLALKPDLVVTAAFGQILPKELLDAPKFGCINVHASLLPELRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +I+ G +TGI IM M + LD G + +VPI+ L +LS + +
Sbjct: 119 APIHYSILQGKEKTGITIMYMAEKLDAGDILTQVEVPITERDTVGTLHDKLSAAGSKLLS 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + KL + L Q + T+A I + + ++++ ++ E ++NHIR L+P+P A+
Sbjct: 179 ETLPKLLNSELTPIRQNDEEATFAYNIKREQEKIDWGKTGEEIYNHIRGLNPWPVAYTTF 238
Query: 240 MIGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRV 291
+ IK+ S+ V+ +PG +I +A + A++I LQ +G +
Sbjct: 239 ----DGKVIKIWNSEKVKSAENKEPGTIIRLEEDGIVVAAGNETAIKITELQPSGKKR 292
>gi|237742597|ref|ZP_04573078.1| methionyl-tRNA formyltransferase [Fusobacterium sp. 4_1_13]
gi|229430245|gb|EEO40457.1| methionyl-tRNA formyltransferase [Fusobacterium sp. 4_1_13]
Length = 314
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 87/315 (27%), Positives = 165/315 (52%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT FA+ +L+ ++ H ++SV+T+ +P RG K S + + A +L
Sbjct: 5 MRIIFMGTPIFALPSLEK-INEKHEVISVFTKADKP-NARGKKINYSPIKEVALANNLKI 62
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E E+ + D+ VVVAYG ++P+ I++ K G N H+SLLPR+RGAAP
Sbjct: 63 YQPENFKDEALIEEIRNMQPDLIVVVAYGKILPKEIIDIPKYGVINLHSSLLPRFRGAAP 122
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD ++G++IM +++ LD G V + IS L L L A +++A
Sbjct: 123 INAAIINGDKKSGVSIMYVEEELDAGDVILQEETEISDEDTFLSLHDRLKDLGADLLLKA 182
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ +E++ + + Q +N +T+ + K + ++++ +++ + N IR ++P P A+ +
Sbjct: 183 IELIEKDEVKVKKQDKNLVTFVKPFRKEDCKIDWTKTSREIFNFIRGMNPVPTAFSNLNE 242
Query: 242 GNKHERIKLLESQLVE---GEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDI 294
IK+ E+++ + GE++ + S G++ I + + +
Sbjct: 243 T----IIKIYETKINDKVYNNATCGEIVEYLKGKGIVVKTSDGSLIITSAKPENKKQMSG 298
Query: 295 GDFLLGCPVIIGCIV 309
D + G + IG +
Sbjct: 299 VDLINGKFLKIGEKL 313
>gi|238028944|ref|YP_002913175.1| methionyl-tRNA formyltransferase [Burkholderia glumae BGR1]
gi|237878138|gb|ACR30471.1| Methionyl-tRNA formyltransferase [Burkholderia glumae BGR1]
Length = 327
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 118/321 (36%), Positives = 169/321 (52%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + ++ V TQP RPAG RG+K SAV + A + +P
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHEAGFAVPLVLTQPDRPAG-RGMKLQASAVKRYALDHGMP 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L G N HASL
Sbjct: 63 VAQPPSLRRTGKYPAEAAEALDRLRATPHDVMVVAAYGLLLPQEVLEMPPRGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RA+ AGD +TG+ +M+MD LDTG + +V I+++ TA L +L+
Sbjct: 123 LPRWRGAAPIHRALEAGDAQTGVTLMQMDVGLDTGAMLSEGRVAIAADETTASLHDKLAQ 182
Query: 173 LCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A + + L +PQ +G+TYAEKI K E +++ A + IRA P
Sbjct: 183 TGARLIVEALVQLERDGELAATPQPADGVTYAEKIGKHEAALDWREPAAVLARRIRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ E + G +PG ++ IAC +GA+R+ +LQ+ G
Sbjct: 243 FPGGAGTL--DGTVIKLWAAEPVVASGAAEPGTIVEAGAGGVVIACGEGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ G
Sbjct: 301 GKRLPAREFLAGAPLAAGQRF 321
>gi|227552687|ref|ZP_03982736.1| methionyl-tRNA formyltransferase [Enterococcus faecium TX1330]
gi|227178182|gb|EEI59154.1| methionyl-tRNA formyltransferase [Enterococcus faecium TX1330]
Length = 305
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 13/300 (4%)
Query: 9 GTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKL 68
GT F+V L+ L+ S + I +V TQP RP G R + V + A + + L P K+
Sbjct: 1 GTPAFSVPILEGLIESGYEIQAVVTQPDRPVG-RKRVITPTPVKEAALKHGIRVLQPEKI 59
Query: 69 G-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127
E E+ + D+ V A+G +P+++L KLG N HASLLP++RG AP+ AIM
Sbjct: 60 SGSPEMEEIIELAPDLIVTAAFGQFLPEKLLQVPKLGAINVHASLLPKYRGGAPVHYAIM 119
Query: 128 AGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQ 187
G+ ETG+ IM+M K +D G + +PI+ + + ++LS+L ++E + +
Sbjct: 120 NGEEETGVTIMEMIKKMDAGGIYAQESMPITKQDDVGTMFEKLSLLGRKLLLETLPNIL- 178
Query: 188 NNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHER 247
N PQ E+ T++ I++ + V++ ++AE + N +R + P+P A+ R
Sbjct: 179 NGQKPVPQDESKATFSPNITREQEAVDWHKTAEEIDNQVRGMRPWPIAFTTYEGT----R 234
Query: 248 IKLLESQLV--EGEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLDIGDFLLGC 301
KLL +++ + PG +I N IAC Q + I LQ AG + DFL G
Sbjct: 235 WKLLSVEVLAESTDEAPGTIIRKDKKNLWIACGKQTVLAINELQPAGKGKQAVHDFLNGS 294
>gi|59802190|ref|YP_208902.1| hypothetical protein NGO1870 [Neisseria gonorrhoeae FA 1090]
gi|240116731|ref|ZP_04730793.1| hypothetical protein NgonPID1_10936 [Neisseria gonorrhoeae PID18]
gi|260439508|ref|ZP_05793324.1| hypothetical protein NgonDG_00175 [Neisseria gonorrhoeae DGI2]
gi|268602402|ref|ZP_06136569.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae PID18]
gi|291042745|ref|ZP_06568486.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae DGI2]
gi|73919409|sp|Q5F5P7|FMT_NEIG1 RecName: Full=Methionyl-tRNA formyltransferase
gi|59719085|gb|AAW90490.1| putative methionyl-tRNA formyltransferase [Neisseria gonorrhoeae FA
1090]
gi|268586533|gb|EEZ51209.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae PID18]
gi|291013179|gb|EFE05145.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae DGI2]
Length = 308
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 121/313 (38%), Positives = 173/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 AQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+SK E R+++ SA+ + IRA +P P AW+E
Sbjct: 180 DLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSESADIIERKIRAFNPVPAAWVEY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 240 QG----KPMKIRRAEVVAQQGTAGEVLSCSADGLVVACGESALKITELQPAGGRRMNIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G + G +
Sbjct: 296 FAAGRSIEAGAKL 308
>gi|251771506|gb|EES52083.1| methionyl-tRNA formyltransferase [Leptospirillum ferrodiazotrophum]
Length = 315
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 99/312 (31%), Positives = 155/312 (49%), Gaps = 12/312 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL-PA 62
R VFMG+ +FAV L+ALVS + V TQP RP G RG + V + A + +
Sbjct: 9 RTVFMGSPDFAVPFLEALVSGGFDVRGVVTQPDRPRG-RGQEVSPVPVKRWALDHGISAV 67
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ E + ++ VVVAYG ++P ILN G N HASLLP +RGA+PI
Sbjct: 68 SPLSLRDPRGREFLDRWEPELIVVVAYGKILPVEILNFPARGCVNVHASLLPAYRGASPI 127
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI G++ TG+++M +D+ +DTGPV ++P+ + T L ++ M+E +
Sbjct: 128 VWAIRNGEHVTGLSLMCLDRGMDTGPVFAKLEIPVEARETTLSLTAKMMDQGPDFMLEGL 187
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
L PQ G + A V +H+RA++P+PGA+ IG
Sbjct: 188 RGYLSGRLVPVPQPPEGTLAPLLSKEDGRIPFSG-PAVGVDSHVRAMNPWPGAFFSSSIG 246
Query: 243 NKHERIKLLESQLVE--GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+K+ E +++ PG V++ +AC +G RI+ LQR GGR++ + +F
Sbjct: 247 ----TVKVGEGRVLAPVANAVPGTVLSLSPEGVDVACGEGVFRILALQREGGRMIPVAEF 302
Query: 298 LLGCPVIIGCIV 309
+ G G ++
Sbjct: 303 ISGRRFKPGEVL 314
>gi|118594096|ref|ZP_01551443.1| methionyl-tRNA formyltransferase [Methylophilales bacterium
HTCC2181]
gi|118439874|gb|EAV46501.1| methionyl-tRNA formyltransferase [Methylophilales bacterium
HTCC2181]
Length = 315
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 106/316 (33%), Positives = 155/316 (49%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT EFAV TL L SSH +V V TQP R +G RG+K S + K AQ+ L
Sbjct: 4 KLKIVFAGTPEFAVPTLNFLDKSSHEVVCVMTQPDRRSG-RGMKINPSPIKKAAQDRGLY 62
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P L E NAD+ +V AYGL+IP ILN G +N HASLLPRWRGAAP
Sbjct: 63 IMQPESLDTNIMENIKDLNADILIVAAYGLIIPNSILNLFSKGCFNVHASLLPRWRGAAP 122
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP-ISSNINTAGLQQELSVLCAHAMVE 180
I RAI +GD G+ IMK+ + LD GP+A + + + Q + +
Sbjct: 123 IHRAIESGDTHIGVTIMKVVERLDAGPMAKKASIKLLEKSTTGDMTQHMAIMGAELMLDT 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ Q E+ +TYA+KI+K E ++N + I+A +P+PG
Sbjct: 183 VETIALCQPIDWVVQNEDEVTYAKKITKAEGKLNLNDEPNALIRKIKAFNPYPGIHGLFR 242
Query: 241 IGNKHERIKLLESQLVE-----GEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLD 293
+K+ ++QL+ + KPG +V + S G + + +Q G + +
Sbjct: 243 EKG----LKIWDAQLINDIKLVKDLKPGDLKVEEKRVILCLSLGGLELTEVQPEGTKKMK 298
Query: 294 IGDFLLGCPVIIGCIV 309
DF+ + G +
Sbjct: 299 AADFITNYKINEGDRI 314
>gi|322689701|ref|YP_004209435.1| methionyl-tRNA formyltransferase [Bifidobacterium longum subsp.
infantis 157F]
gi|320461037|dbj|BAJ71657.1| methionyl-tRNA formyltransferase [Bifidobacterium longum subsp.
infantis 157F]
Length = 328
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 97/323 (30%), Positives = 156/323 (48%), Gaps = 21/323 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT + AV +L+A + +V V T+P P G RG K S V KA E LP
Sbjct: 2 LKLVFAGTPDVAVPSLKAFAADPRFDVVGVITRPDAPTG-RGRKLTPSPVKAKALELGLP 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ E E +AD+A V+AYG ++P+ +L+A +G+YN H S LP+WRGAAP
Sbjct: 61 VIDLKPRSPEFMEALNDLHADIAAVIAYGNILPKNVLDAVPMGWYNLHFSNLPKWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
QRAI AGD TG + K+ + LD GP+ + ++ + L L+ A V+A
Sbjct: 121 AQRAIWAGDPTTGADVFKVGEGLDDGPIVASLTIELTGRETSGELLDRLAEEGAPMYVDA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + + Q G+ YA KI+ + R+++ AE + +RA +P PGAW E+
Sbjct: 181 LAAVGEGTATFTAQPAEGLEYAHKITVEDARISWTDEAEAIDRQVRACTPHPGAWTELFA 240
Query: 242 GNK----------HERIKLLESQLVE-------GEGKPGE--VINPNFTIACSQGAVRIM 282
+ +L +Q + E +PGE V N + + +
Sbjct: 241 EGPIADNDEPAAKPLTLHILAAQPADQSNPNTPAELQPGELKVGKKNVWVGTGSTPLELT 300
Query: 283 RLQRAGGRVLDIGDFLLGCPVII 305
+++ G + + D+ G +
Sbjct: 301 QVKAQGKKAMRAADWARGARLSP 323
>gi|294784884|ref|ZP_06750172.1| methionyl-tRNA formyltransferase [Fusobacterium sp. 3_1_27]
gi|294486598|gb|EFG33960.1| methionyl-tRNA formyltransferase [Fusobacterium sp. 3_1_27]
Length = 314
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 87/315 (27%), Positives = 165/315 (52%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT FA+ +L+ ++ H ++SV+T+ +P RG K S + + A +L
Sbjct: 5 MRIIFMGTPIFALPSLEK-INEKHEVISVFTKADKP-NARGKKINYSPIKEVALANNLKI 62
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E E+ + D+ VVVAYG ++P+ I++ K G N H+SLLPR+RGAAP
Sbjct: 63 YQPENFKDEALIEEIRNMQPDLIVVVAYGKILPKEIIDIPKYGVINLHSSLLPRFRGAAP 122
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD ++G++IM +++ LD G V + IS L L L A +++A
Sbjct: 123 INAAIINGDKKSGVSIMYVEEELDAGDVILQEETEISDEDTFLSLHDRLKDLGADLLLKA 182
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ +E++ + + Q +N +T+ + K + ++++ +++ + N IR ++P P A+ +
Sbjct: 183 IELIEKDEVKVKKQDKNLVTFVKPFKKEDCKIDWTKTSREIFNFIRGMNPVPTAFSNLNE 242
Query: 242 GNKHERIKLLESQLVE---GEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDI 294
IK+ E+++ + GE++ + S G++ I + + +
Sbjct: 243 T----IIKIYETKINDKVYNNATCGEIVEYLKGKGIVVKTSDGSLIITSAKPENKKQMSG 298
Query: 295 GDFLLGCPVIIGCIV 309
D + G + IG +
Sbjct: 299 VDLINGKFLKIGEKL 313
>gi|256845992|ref|ZP_05551450.1| methionyl-tRNA formyltransferase [Fusobacterium sp. 3_1_36A2]
gi|256719551|gb|EEU33106.1| methionyl-tRNA formyltransferase [Fusobacterium sp. 3_1_36A2]
Length = 314
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 87/315 (27%), Positives = 165/315 (52%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT FA+ +L+ ++ H ++SV+T+ +P RG K S + + A +L
Sbjct: 5 MRIIFMGTPIFALPSLEK-INEKHEVISVFTKADKP-NARGKKINYSPIKEVALANNLKI 62
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E E+ + D+ VVVAYG ++P+ I++ K G N H+SLLPR+RGAAP
Sbjct: 63 YQPENFKDEALIEEIRNMQPDLIVVVAYGKILPKEIIDIPKYGVINLHSSLLPRFRGAAP 122
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD ++G++IM +++ LD G V + IS L L L A +++A
Sbjct: 123 INAAIINGDKKSGVSIMYVEEELDAGDVILQEETEISDEDTFLSLHDRLKDLGADLLLKA 182
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ +E++ + + Q +N +T+ + K + ++++ +++ + N IR ++P P A+ +
Sbjct: 183 IELIEKDEVKVKKQDKNLVTFVKPFKKEDCKIDWTKTSREIFNFIRGMNPVPTAFSNLNE 242
Query: 242 GNKHERIKLLESQLVE---GEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDI 294
IK+ E+++ + GE++ + S G++ I + + +
Sbjct: 243 T----IIKIYETKINDKIYNNATCGEIVEYLKGKGIVVKTSDGSLIITSAKPENKKQMSG 298
Query: 295 GDFLLGCPVIIGCIV 309
D + G + IG +
Sbjct: 299 VDLINGKFLKIGEKL 313
>gi|187922317|ref|YP_001893959.1| methionyl-tRNA formyltransferase [Burkholderia phytofirmans PsJN]
gi|238689475|sp|B2T1K6|FMT_BURPP RecName: Full=Methionyl-tRNA formyltransferase
gi|187713511|gb|ACD14735.1| methionyl-tRNA formyltransferase [Burkholderia phytofirmans PsJN]
Length = 328
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 125/321 (38%), Positives = 176/321 (54%), Gaps = 15/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ S+ + V TQP RPAG RG+K S V + AQE L
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHSAGFQVPLVLTQPDRPAG-RGMKLQASPVKRYAQEHGLA 62
Query: 62 ALVPTKLGQEEYE---------QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + Q + DV VV AYGL++PQ +L+ LG N HASL
Sbjct: 63 VAQPPSLRRVGKYPAEAAAAIDQLRATPHDVMVVAAYGLILPQEVLDIPLLGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETGI +M+MD LDTG + + I+++ TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGITLMQMDVGLDTGAMISEARTAITADDTTATLHDRLAQ 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +VEA+ +LE+ +PQ G+TYAEKI K E +++ R A + +RA P
Sbjct: 183 DGAKLIVEALIELERTGKLAATPQPAEGVTYAEKIGKHEAALDWRRPAAVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ ++ + G PG + + +AC +GA+R+ +LQ+ G
Sbjct: 243 FPGGVATLED-GTSIKLWAAVARDTQANGAPGTITDVSPEGVVVACGEGALRLTQLQKPG 301
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L + +FL G + +G
Sbjct: 302 GKRLPVREFLAGSTLAVGQRF 322
>gi|261856666|ref|YP_003263949.1| methionyl-tRNA formyltransferase [Halothiobacillus neapolitanus c2]
gi|261837135|gb|ACX96902.1| methionyl-tRNA formyltransferase [Halothiobacillus neapolitanus c2]
Length = 311
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 113/308 (36%), Positives = 166/308 (53%), Gaps = 8/308 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT+R+++ GT FAV LQAL S +V+VYTQP RP+G RG K S V + A
Sbjct: 1 MTVRIIYAGTPFFAVPALQALAADDSVELVAVYTQPDRPSG-RGQKLTPSPVKEAALALG 59
Query: 60 LPALVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P L E + L+ + D+ VV AYGL++P +L +LG N HASLLPRWRG
Sbjct: 60 IPVEQPLTLRDESAQTALAGYRPDLMVVAAYGLILPVPVLKTPRLGAINIHASLLPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPI RAI AGD TGI IM+M + LDTG + ++ I A L L+ L A A+
Sbjct: 120 AAPIARAIEAGDPVTGITIMQMAQGLDTGDMLHKVELAIRPTDTAATLHDRLAELGAQAL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ A+ + ++ PQ + YA K++K E R+++ A+ + +RA P+P A+ E
Sbjct: 180 MAALPGIVAGSITPEPQDDTQACYAAKLNKAEGRLDWREPADLLARRVRAFDPWPVAYTE 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
RI E + + +PG V+ F ++ G +R++ Q+AGG+ +
Sbjct: 240 FKSA--PLRIWSAEVEPSSPQAQPGTVVTVDASGFVVSTVAGGLRVLACQQAGGKRISAA 297
Query: 296 DFLLGCPV 303
DF +
Sbjct: 298 DFARNHQL 305
>gi|313608143|gb|EFR84196.1| methionyl-tRNA formyltransferase [Listeria monocytogenes FSL
F2-208]
Length = 312
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 15/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L L +S++ +V+V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPEFSVPVLTQL-ASTYDVVAVVTQPDRPVG-RKRVLTPPPVKKAALELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E ++ ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELDELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSKLGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ +T+A IS+ + ++++ + + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITAIPQDPEKVTFARNISREQEKIDWTKPGRTIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLESQLVEG--EGKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDI 294
+ K+ E+ E +G+PG ++ I G + + +Q AG +DI
Sbjct: 238 EE----KPFKIWEATYEETKEDGEPGAILADKTTLKIVAGDGTLIVPTVIQPAGKPKMDI 293
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 294 HSFMSGAGRNLSKTTRFG 311
>gi|160872198|ref|ZP_02062330.1| methionyl-tRNA formyltransferase [Rickettsiella grylli]
gi|159120997|gb|EDP46335.1| methionyl-tRNA formyltransferase [Rickettsiella grylli]
Length = 314
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 120/315 (38%), Positives = 183/315 (58%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA+ +L AL S+ + + +VYTQP RPAG RG K ++S V K A E LP
Sbjct: 1 MKLIFAGTPEFALPSLHALASA-YKLCAVYTQPDRPAG-RGRKLLMSPVKKMALENKLPV 58
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P L + + ++ L+ D+ VVVAYGL++P +L + G N HASLLPRWRGAAP
Sbjct: 59 IQPFSLRESKEQKKLASLHADLMVVVAYGLILPPAVLAMPRFGCINVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+AGD ETGI IM+MD+ LDTG + I LQ L+ L AHA++E+
Sbjct: 119 IQRAILAGDRETGITIMQMDEGLDTGEIIKKFPCSIEPTDTNKTLQDRLAELGAHALLES 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E + PQ E TYA+KI+K E +++ + A + +RA P P A + +
Sbjct: 179 LKWIESGSYRSEPQNEKESTYAKKINKSEAEIDWEQPAIYLDRLVRAFYPKPVARVVLGK 238
Query: 242 GNKHERIKLLESQLVE--GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+++ +++++E KPG ++ +A +G +R++ +Q GGR L I
Sbjct: 239 S----ILRICKAEVLEETTSEKPGLILKVDREGIDVATGKGVLRLLEVQWPGGRCLPISS 294
Query: 297 FLLGCP--VIIGCIV 309
F+ G +G I+
Sbjct: 295 FIHGQSELFHVGAIL 309
>gi|23466333|ref|NP_696936.1| methionyl-tRNA formyltransferase [Bifidobacterium longum NCC2705]
gi|46190956|ref|ZP_00206625.1| COG0223: Methionyl-tRNA formyltransferase [Bifidobacterium longum
DJO10A]
gi|189440828|ref|YP_001955909.1| methionyl-tRNA formyltransferase [Bifidobacterium longum DJO10A]
gi|239620676|ref|ZP_04663707.1| methionyl-tRNA formyltransferase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|317481740|ref|ZP_07940772.1| methionyl-tRNA formyltransferase [Bifidobacterium sp. 12_1_47BFAA]
gi|33516871|sp|Q8G3H1|FMT_BIFLO RecName: Full=Methionyl-tRNA formyltransferase
gi|229487439|sp|B3DRM9|FMT_BIFLD RecName: Full=Methionyl-tRNA formyltransferase
gi|23327089|gb|AAN25572.1| methionyl-tRNA formyltransferase [Bifidobacterium longum NCC2705]
gi|189429263|gb|ACD99411.1| Methionyl-tRNA formyltransferase [Bifidobacterium longum DJO10A]
gi|239516252|gb|EEQ56119.1| methionyl-tRNA formyltransferase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|291516256|emb|CBK69872.1| methionyl-tRNA formyltransferase [Bifidobacterium longum subsp.
longum F8]
gi|316916854|gb|EFV38244.1| methionyl-tRNA formyltransferase [Bifidobacterium sp. 12_1_47BFAA]
Length = 328
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 96/323 (29%), Positives = 156/323 (48%), Gaps = 21/323 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT + AV +L+A + +V V T+P P G RG K S V A E LP
Sbjct: 2 LKLVFAGTPDVAVPSLKAFAADPRFDVVGVITRPDAPTG-RGRKLTPSPVKATALELGLP 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ E E + +AD+A V+AYG ++P+ +L+A +G+YN H S LP+WRGAAP
Sbjct: 61 VIDLKPRSPEFMEALNNLHADIAAVIAYGNILPKNVLDAVPMGWYNLHFSNLPKWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
QRAI AGD TG + K+ + LD GP+ + ++ + L L+ A V+A
Sbjct: 121 AQRAIWAGDPTTGADVFKVGEGLDDGPIVASLTIELTGRETSGELLDRLAEEGAPMYVDA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + + Q G+ YA KI+ + R+++ AE + +RA +P PGAW E+
Sbjct: 181 LAAVGEGTATFTAQPAEGLEYAHKITVEDARISWTDEAEAIDRQVRACTPHPGAWTELFA 240
Query: 242 GNK----------HERIKLLESQLVE-------GEGKPGE--VINPNFTIACSQGAVRIM 282
+ +L +Q + E +PGE V N + + +
Sbjct: 241 EGPIADNDEPAAKPLTLHILAAQPADQSNPNTPAELQPGELKVGKKNVWVGTGSTPLELT 300
Query: 283 RLQRAGGRVLDIGDFLLGCPVII 305
+++ G + + D+ G +
Sbjct: 301 QVKAQGKKAMRAADWARGARLSP 323
>gi|300784670|ref|YP_003764961.1| methionyl-tRNA formyltransferase [Amycolatopsis mediterranei U32]
gi|299794184|gb|ADJ44559.1| methionyl-tRNA formyltransferase [Amycolatopsis mediterranei U32]
Length = 308
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 104/312 (33%), Positives = 156/312 (50%), Gaps = 10/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT + AV L+AL+ S H IV+V T+P AG RG + V S V A +
Sbjct: 1 MKLVFAGTPDPAVPALRALLDSGRHEIVAVVTRPDAQAG-RGRRVVRSPVGALADAHGIE 59
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + G + D VVAYG ++PQ L+ +LG+ N H SLLP WRGAA
Sbjct: 60 VLTPARAGDPAFLARLTELAPDACPVVAYGALLPQAALDIPRLGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG + ++ K LD GPV + I + L L+ A ++
Sbjct: 120 PVQAAIRAGDEITGASTFRIVKELDAGPVFGVVTEAIGATDTAGALLGRLAESGAKLLLS 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD L +L Q G++YA K++ + RV+F A V IR+++P PGAW E
Sbjct: 180 TMDGLADGSLVAREQPAEGVSYAPKVTVEDARVSFADPAPAVDRQIRSVTPEPGAWAEF- 238
Query: 241 IGNKHERIKLLESQLVEGEGKP-GEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ ER KL +++ G P GE++ + + +R+ +Q G + + D+
Sbjct: 239 ---RGERFKLGPVTVLDEPGPPPGEIVVERKRVLVGTATKPLRLGEVQAPGKKRMAATDW 295
Query: 298 LLGCPVIIGCIV 309
G + G +
Sbjct: 296 ARGTRIDQGERL 307
>gi|73662865|ref|YP_301646.1| methionyl-tRNA formyltransferase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|72495380|dbj|BAE18701.1| methionyl-tRNA formyltransferase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
Length = 312
Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 107/317 (33%), Positives = 172/317 (54%), Gaps = 14/317 (4%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M + +V+FMGT +F+ L+ L+ + H +++V TQP RP G R V + A +
Sbjct: 1 MIMSKVIFMGTPDFSTKVLEMLI-AEHDVIAVVTQPDRPVG-RKRVLTPPPVKEVAIKHG 58
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP P K E EQ + AD+ V A+G ++P+ +LNA KLG N HASLLP++RG
Sbjct: 59 LPVYQPEKLAQSSELEQLIDLEADLIVTAAFGQILPESLLNAPKLGAINVHASLLPKYRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API +AIM G ETGI+IM M K LD G + + + I + + +LS L A +
Sbjct: 119 GAPIHQAIMDGQTETGISIMYMVKKLDAGDIISQQAIEIEHQDDVGTMHDKLSFLGAELL 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
E + + Q E+ ++A IS+ + ++++ +SAE ++NHIR LSP+P A+
Sbjct: 179 KETLPSIINGTNNRITQNESEASFATNISREQEKIDWYQSAEVIYNHIRGLSPWPVAYTV 238
Query: 239 MMIGNKHERIKLLESQLVEGE-GKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLD 293
M GN K+ S++ +G+ G+PG +I +A A+ + +Q AG + +
Sbjct: 239 MDDGNM----KVYASRIEKGKTGEPGTIIETTKKAIIVATGSDDAIALTDIQVAGKKRML 294
Query: 294 IGDFLLGCPVI-IGCIV 309
++L G +G ++
Sbjct: 295 TANYLSGVQTSLVGKVL 311
>gi|325107785|ref|YP_004268853.1| Methionyl-tRNA formyltransferase [Planctomyces brasiliensis DSM
5305]
gi|324968053|gb|ADY58831.1| Methionyl-tRNA formyltransferase [Planctomyces brasiliensis DSM
5305]
Length = 321
Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 162/319 (50%), Gaps = 11/319 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M L VV M T EFA+ + +AL++S H + ++ TQP R RG K + + A E ++
Sbjct: 1 MGLNVVMMATGEFALPSFRALLNSPHRLTALITQPDR-VNPRG-KVHQHPLKELALEHNI 58
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P + E + + DV V AYG ++ ++N LG YN HASLLPR RGA
Sbjct: 59 PVLQPESINTPESIRKLQALRPDVVAVAAYGQILKADVINVPSLGMYNLHASLLPRHRGA 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ AI GD +TG+ I +++ LD GP+ R+ I T L L+ + A A +
Sbjct: 119 APIQYAIWKGDKKTGVTIFRIEPKLDAGPMIVKRETEILPRETTGKLHDRLAEVGAEAFL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EA + +E N Q ++ +T + KI K + +++ SA + NH+ A+ P+P + +
Sbjct: 179 EAFNLIEAGNAKPLEQDDSQVTQSPKIRKEQGAIDWSLSAAEITNHLYAMQPWPNPFTFL 238
Query: 240 MIGNKH-ERIKLLESQLVE----GEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRV 291
++ +R+ +L+ + G VI+ + + + + +Q+AG +
Sbjct: 239 YQADQPPQRVLILDVAPADDMRDSHLSAGSVISADNGRLIVQTGSDPLELETIQKAGKKP 298
Query: 292 LDIGDFLLGCPVIIGCIVG 310
+ DFL G P+ G G
Sbjct: 299 MAAADFLRGVPLKKGDHFG 317
>gi|237746967|ref|ZP_04577447.1| methionyl-tRNA formyltransferase [Oxalobacter formigenes HOxBLS]
gi|229378318|gb|EEO28409.1| methionyl-tRNA formyltransferase [Oxalobacter formigenes HOxBLS]
Length = 316
Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 123/318 (38%), Positives = 174/318 (54%), Gaps = 19/318 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VF GT EFA L ALV + H I V TQP RP+G RG+K SAV K A +P
Sbjct: 1 MKIVFAGTPEFASTALNALVRAGHQIGLVLTQPDRPSG-RGMKLQASAVKKLAVSEGIPV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ ++ YE+ DV VVVAYGL++P+ L K G N HASLL
Sbjct: 60 EQPVSLRLDGRHGEEAKKVYERIARIEPDVMVVVAYGLILPKVFLELPKYGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPIQRAI AGD +TG++IM+M++ LDTGPV V I + N + L +L+ L
Sbjct: 120 PRWRGAAPIQRAIEAGDEKTGVSIMQMEEGLDTGPVLLKETVAIEKDDNASRLHDKLADL 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ ++ A+++L +N+ + Q E+ YA KI K E VNF SA + N IRA PFP
Sbjct: 180 GSRLILSALNQLAENSARFTVQDEDAAIYAAKIRKEEATVNFTFSATEIVNKIRAFDPFP 239
Query: 234 GAWLEMMIGNKHERIKLLESQ-----LVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAG 288
G + ++ IK+ +++ G+ V + C + +VRI+ LQ+ G
Sbjct: 240 GCIAKY----RNIPIKIWKAENAGSYPGTKAGQIVSVNESGIVVGCVEDSVRILELQKPG 295
Query: 289 GRVLDIGDFLLGCPVIIG 306
G+ L +F+ G G
Sbjct: 296 GKRLSAAEFIKGFSFENG 313
>gi|294788254|ref|ZP_06753497.1| methionyl-tRNA formyltransferase [Simonsiella muelleri ATCC 29453]
gi|294483685|gb|EFG31369.1| methionyl-tRNA formyltransferase [Simonsiella muelleri ATCC 29453]
Length = 309
Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 123/313 (39%), Positives = 172/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT +FA A L+A+ + I V TQP RP G RG++ S V + A + L
Sbjct: 1 MRVIFAGTPDFAAAALRAIAEAGFEIPLVLTQPDRPKG-RGMQLQASPVKQTALDLGLHV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL NADV VV AYGL++P +L+ K G N HASLLPRWRGAA
Sbjct: 60 AQPEKLRNNTEALAMLRDVNADVMVVAAYGLILPPEVLDTPKYGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + + EL L A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDAGLDTGAVVSKHRYTIQTTDTANEVHDELMKLGAMAIVS 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L ++ +PQ ENG+TYA+K+SK E ++N+ AE + IRA +P P AW
Sbjct: 180 DLQELARSGSLKATPQPENGVTYAQKLSKEEAQINWQEPAELITRKIRAFNPVPTAWTN- 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + +K+ ++ V G GEV+ +AC GA+ I LQ +G + + +
Sbjct: 239 ---WQGKPMKIWQAHFVAQSGAVGEVLAANGDGIVVACGNGAICITELQASGSKRMTVQA 295
Query: 297 FLLGCPVIIGCIV 309
FL G + +G +
Sbjct: 296 FLAGREMTVGEVF 308
>gi|332638216|ref|ZP_08417079.1| methionyl-tRNA formyltransferase [Weissella cibaria KACC 11862]
Length = 320
Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 104/316 (32%), Positives = 164/316 (51%), Gaps = 14/316 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT ++VFMGT F+V L AL+ ++ +++V TQP RP G R + V + A
Sbjct: 1 MTTKIVFMGTPNFSVPILNALIADDNYDVLAVMTQPDRPVG-RKRVLTPTPVKEAAVAAG 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ L P K G EE + ++ D+ + AYG +P ++L A ++ N HASLLP++RG
Sbjct: 60 IRVLQPEKLSGSEEMAEVIAMAPDLLITAAYGQFLPTKLLQAAQIAAINVHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API A++ GD ETG++IM M K +D G V +PI + NT L +LS+L +
Sbjct: 120 GAPIHYAVLNGDAETGVSIMYMIKAMDAGDVISRATLPILDDDNTGTLFDKLSLLGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + L N+ PQ E+ +T++ I+ + ++F RSA +HNH+R L PFP A
Sbjct: 180 LQTLPDLIAGNVTPEPQNEDDVTFSPNITPEQEVLDFTRSAREIHNHVRGLYPFPIAHTT 239
Query: 239 MMIGNKHERIKLLESQLVE--GEGKPGEVINPN---FTIACSQG-AVRIMRLQRAGGRVL 292
+ R K+ ++ LV+ + G V+ +A G + I LQ AG +
Sbjct: 240 I----NGVRTKIQQTHLVDETTDAPAGTVVKKGKHDLWLAAGDGHIIAIDELQPAGKPKM 295
Query: 293 DIGDFLLGC-PVIIGC 307
+ +L G G
Sbjct: 296 TVTAYLNGHAKFEEGE 311
>gi|240118953|ref|ZP_04733015.1| hypothetical protein NgonPID_10947 [Neisseria gonorrhoeae PID1]
gi|268604664|ref|ZP_06138831.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae PID1]
gi|268588795|gb|EEZ53471.1| methionyl-tRNA formyltransferase [Neisseria gonorrhoeae PID1]
Length = 308
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 120/313 (38%), Positives = 173/313 (55%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + ADV VV AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 AQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L + A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L+ Q E G+TYA+K+SK E R+++ SA+ + IRA +P P AW++
Sbjct: 180 DLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSESADIIERKIRAFNPVPAAWVQY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ +++V +G GEV++ +AC + A++I LQ AGGR ++I
Sbjct: 240 QG----KPMKIRRAEVVAQQGTAGEVLSCSADGLVVACGESALKITELQPAGGRRMNIAA 295
Query: 297 FLLGCPVIIGCIV 309
F G + G +
Sbjct: 296 FAAGRSIEAGAKL 308
>gi|46908055|ref|YP_014444.1| methionyl-tRNA formyltransferase [Listeria monocytogenes serotype
4b str. F2365]
gi|226224426|ref|YP_002758533.1| methionyl-tRNA formyltransferase [Listeria monocytogenes Clip81459]
gi|67460685|sp|Q71YJ3|FMT_LISMF RecName: Full=Methionyl-tRNA formyltransferase
gi|259646040|sp|C1KWC2|FMT_LISMC RecName: Full=Methionyl-tRNA formyltransferase
gi|46881325|gb|AAT04621.1| methionyl-tRNA formyltransferase [Listeria monocytogenes serotype
4b str. F2365]
gi|225876888|emb|CAS05597.1| Putative methionyl-tRNA formyltransferase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
Length = 312
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 15/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L L +S++ +V+V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPEFSVPVLTQL-ASTYDVVAVVTQPDRPVG-RKRVLTPPPVKKAALELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E E+ ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSKLGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ +T+A IS+ + ++++ + + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITAIPQDPEKVTFARNISREQEKIDWTKPGRTIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLESQLVEG--EGKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDI 294
+ K+ E+ E +G+PG ++ I G + + +Q AG +D+
Sbjct: 238 EE----KPFKIWEATYEETKEDGEPGAILADKTTLKIVAGDGTLIVPTVIQPAGKPKMDV 293
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 294 HSFMTGAGRNLSKTTRFG 311
>gi|317475621|ref|ZP_07934882.1| methionyl-tRNA formyltransferase [Bacteroides eggerthii 1_2_48FAA]
gi|316908191|gb|EFV29884.1| methionyl-tRNA formyltransferase [Bacteroides eggerthii 1_2_48FAA]
Length = 322
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 103/313 (32%), Positives = 160/313 (51%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+V+MGT EFAV L+ LV ++I V T P +PAG RG K S V + A E LP
Sbjct: 6 LRIVYMGTPEFAVEPLRCLVEGGYNIAGVITMPDKPAG-RGHKVQFSPVKQYALEHGLPL 64
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E + + L +V ++P+ + N +LG +N HASLLP++RGAAPI
Sbjct: 65 LQPEKLKDETFVEALRALNADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYRGAAPI 124
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ GD ETGI + +DTG V +VPI+ N + +L +L +VE +
Sbjct: 125 NWAVINGDTETGITTFFLKHEIDTGEVIQQVRVPIADTDNVGIVHDKLMMLGGRLVVETV 184
Query: 183 DKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
D + + PQ E + A KI K R+++ + +++ IR LSP+P AW E
Sbjct: 185 DAIIAGKVKPVPQEEMAVVGELRPAPKIFKDTCRIDWNMPVKRIYDFIRGLSPYPAAWTE 244
Query: 239 MMIGNKHERI-KLLESQLVEGEGK--PGEVINPN---FTIACSQGAVRIMRLQRAGGRVL 292
++ + + K+ E++ +E + PG + I+ + G + + LQ G + L
Sbjct: 245 LVQPDGTVVVLKIFETEKMEQPHRFSPGTLQTDGKTYIRISGTDGWISVRALQLPGKKRL 304
Query: 293 DIGDFLLGCPVII 305
+ L G +
Sbjct: 305 KTDELLRGFKLTE 317
>gi|218128564|ref|ZP_03457368.1| hypothetical protein BACEGG_00134 [Bacteroides eggerthii DSM 20697]
gi|217989288|gb|EEC55602.1| hypothetical protein BACEGG_00134 [Bacteroides eggerthii DSM 20697]
Length = 324
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 103/313 (32%), Positives = 160/313 (51%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+V+MGT EFAV L+ LV ++I V T P +PAG RG K S V + A E LP
Sbjct: 8 LRIVYMGTPEFAVEPLRCLVEGGYNIAGVITMPDKPAG-RGHKVQFSPVKQYALEHGLPL 66
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E + + L +V ++P+ + N +LG +N HASLLP++RGAAPI
Sbjct: 67 LQPEKLKDETFVEALRALNADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYRGAAPI 126
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ GD ETGI + +DTG V +VPI+ N + +L +L +VE +
Sbjct: 127 NWAVINGDTETGITTFFLKHEIDTGEVIQQVRVPIADTDNVGIVHDKLMMLGGRLVVETV 186
Query: 183 DKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
D + + PQ E + A KI K R+++ + +++ IR LSP+P AW E
Sbjct: 187 DAIIAGKVKPVPQEEMAVVGELRPAPKIFKDTCRIDWNMPVKRIYDFIRGLSPYPAAWTE 246
Query: 239 MMIGNKHERI-KLLESQLVEGEGK--PGEVINPN---FTIACSQGAVRIMRLQRAGGRVL 292
++ + + K+ E++ +E + PG + I+ + G + + LQ G + L
Sbjct: 247 LVQPDGTVVVLKIFETEKMEQPHRFSPGTLQTDGKTYIRISGTDGWISVRALQLPGKKRL 306
Query: 293 DIGDFLLGCPVII 305
+ L G +
Sbjct: 307 KTDELLRGFKLTE 319
>gi|21233176|ref|NP_639093.1| methionyl-tRNA formyltransferase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66770116|ref|YP_244878.1| methionyl-tRNA formyltransferase [Xanthomonas campestris pv.
campestris str. 8004]
gi|23821554|sp|Q8P4G0|FMT_XANCP RecName: Full=Methionyl-tRNA formyltransferase
gi|81303932|sp|Q4UQ15|FMT_XANC8 RecName: Full=Methionyl-tRNA formyltransferase
gi|21115025|gb|AAM43005.1| 10-Formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase
[Xanthomonas campestris pv. campestris str. ATCC 33913]
gi|66575448|gb|AAY50858.1| 10-Formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase
[Xanthomonas campestris pv. campestris str. 8004]
Length = 307
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 165/305 (54%), Gaps = 9/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT +FAVA+L+A + H +V+VYTQP RPAG RG S V A +P
Sbjct: 1 MRIVFAGTPDFAVASLRA-AAQRHEVVAVYTQPDRPAG-RGRGLTPSPVKLDAIARGIPV 58
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E + D+ VVVAYGL++P+ +L A G +N HASLLPRWRGAAP
Sbjct: 59 FQPQTLRSPEALATLRALQPDLMVVVAYGLILPKAVLAAPTHGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETG+ +M+M+ LDTGPV ++V I L L+ L A + +
Sbjct: 119 IQRAIEAGDTETGVCLMQMEAGLDTGPVLLSQRVEIGEQETGGQLHDRLAALGAQVLSDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ G+TYA K+ K + R+++ + AE + +RA +P+P E +
Sbjct: 179 LGLLRAGIRPVAQPQPAEGVTYAHKLDKAQARLDWAQPAEELARRVRAFNPWPV--AEAI 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + R+ + + + PG ++ IAC QGA+R+ LQR GG+ + D+
Sbjct: 237 LAGERVRLHGAVALDLAHQQAPGTLLAASKQGIDIACGQGALRVRVLQREGGKAITAADY 296
Query: 298 LLGCP 302
L
Sbjct: 297 LNARR 301
>gi|319940731|ref|ZP_08015073.1| methionyl-tRNA formyltransferase [Sutterella wadsworthensis
3_1_45B]
gi|319805882|gb|EFW02649.1| methionyl-tRNA formyltransferase [Sutterella wadsworthensis
3_1_45B]
Length = 319
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 104/325 (32%), Positives = 158/325 (48%), Gaps = 25/325 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT +FA LQAL + H I V TQP RP+G RG+K S V AQ+ +
Sbjct: 1 MRIIFAGTPDFAAVALQALTDAGHEIPLVLTQPDRPSG-RGMKLTPSPVKVLAQKLGIEV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLV---------------IPQRILNATKLGFYN 107
P L ++ + + L+ + I + N
Sbjct: 60 ATPFTLSLKKDPDGAAAMHARLKSLNADLLVVAAYGLILPQPVLDCAKGIGKFRDIKALN 119
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQ 167
HASLLPRWRGAAPI RAI AGD ETG+ +MKM+ LDTGP+ + PI + TA L
Sbjct: 120 IHASLLPRWRGAAPIARAIEAGDAETGVTLMKMELGLDTGPMVAEARTPILAEDTTATLT 179
Query: 168 QELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR 227
L+ + A+ +V+++ + PQ + G+ YAEK+ K E R+ + SA + +R
Sbjct: 180 GRLASMGANLLVQSLQHANELICT--PQPDEGVLYAEKLLKSEKRIQWNDSAAVIARRLR 237
Query: 228 ALSPFPGAWLEMMIGNKHERIKLLESQLVEGE-GKPGEVIN--PNFTIACSQGAVRIMRL 284
A +PFPG + + +K+ + + + G GEV++ + + C GA+RI L
Sbjct: 238 AFTPFPG----LEFHRGADVVKVWSATAEDADTGLIGEVLSIEHDLVVRCGVGALRITEL 293
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
QR G + G + G ++
Sbjct: 294 QRPGKTRSSAQAAVQGLHLQKGEVL 318
>gi|145220093|ref|YP_001130802.1| methionyl-tRNA formyltransferase [Prosthecochloris vibrioformis DSM
265]
gi|189044568|sp|A4SFP1|FMT_PROVI RecName: Full=Methionyl-tRNA formyltransferase
gi|145206257|gb|ABP37300.1| methionyl-tRNA formyltransferase [Chlorobium phaeovibrioides DSM
265]
Length = 319
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 100/314 (31%), Positives = 164/314 (52%), Gaps = 5/314 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS--SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
LR++FMGT +FAV +LQA+V + +V V T P RP ++ ++ + V A +
Sbjct: 5 PLRLIFMGTPDFAVPSLQAIVDASLPVEVVQVVTAPDRPRRKKNAEAEPTPVKSLALQLG 64
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP L + + + + +VVA ++P + A +LG +N HASLLP +RGA
Sbjct: 65 LPVLEVEDVKDPGFAEAVRRLQPDVIVVAAFRILPPAVYGAARLGAFNLHASLLPAYRGA 124
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A++ G+ E+G+ + + +DTG + + PI+S N L + LS + A A+V
Sbjct: 125 APINHALIEGERESGVTTFFLQRQVDTGNIILKKSTPINSMENATQLAERLSQIGAEAVV 184
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + + +S Q E+ ++ A K+++ TR+++ +SAE++HN IR L+ P AW +
Sbjct: 185 ETLRLIAEGTVEVSAQDESLVSKAPKLTRENTRIDWNQSAEDLHNFIRGLAMRPTAWTTL 244
Query: 240 MIGNKHERIKL-LESQLVEGEGKPGE-VINPNFTIACS-QGAVRIMRLQRAGGRVLDIGD 296
N + GKPG +I A G + I+ LQ G R +D G+
Sbjct: 245 GGKNFKIFQSAPAPAVPATSCGKPGTMLIEGGCLYASGTDGWIEILSLQLEGKRPMDAGE 304
Query: 297 FLLGCPVIIGCIVG 310
FL G G + G
Sbjct: 305 FLRGFRAESGVLFG 318
>gi|296129701|ref|YP_003636951.1| methionyl-tRNA formyltransferase [Cellulomonas flavigena DSM 20109]
gi|296021516|gb|ADG74752.1| methionyl-tRNA formyltransferase [Cellulomonas flavigena DSM 20109]
Length = 319
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 103/311 (33%), Positives = 156/311 (50%), Gaps = 5/311 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F G+ AV +L+AL+ S H +V+V T+P G RG SAV A++ LP
Sbjct: 1 MRLLFAGSPAAAVPSLEALLGSRHEVVAVLTRPDARVG-RGRTLRPSAVGAVARDHGLPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P G E + + D A VVAYG+++P +L + G+ N H S+LP WRGAAP
Sbjct: 60 LTPGTLRGSEPAAEIAALGVDAAPVVAYGMLVPAPLLGMPRHGWVNLHFSVLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A+MAGD TG + ++++ LDTGPV I + L L+ A +V
Sbjct: 120 VQHALMAGDEVTGASTFRLEEGLDTGPVYGTLTETIRPTDTSGDLLGRLATAGAQLLVST 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D LE L PQ G+++A K++ + RV + A V IR +P PGAW +
Sbjct: 180 LDALEDGALHPVPQPAEGVSHAPKLTVDDARVRWTHPAHVVDRRIRGCTPAPGAWTTLPD 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
G++ + V G PGE+ + + GAVR+ + G R + D+
Sbjct: 240 GSRLGLGPVRPVPDVTDLG-PGELRAGKRDVLVGAGTGAVRLGDVTPPGKRPMPAADWAR 298
Query: 300 GCPVIIGCIVG 310
G G ++G
Sbjct: 299 GARPAPGTVLG 309
>gi|116873258|ref|YP_850039.1| methionyl-tRNA formyltransferase [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|123458548|sp|A0AJS8|FMT_LISW6 RecName: Full=Methionyl-tRNA formyltransferase
gi|116742136|emb|CAK21260.1| methionyl-tRNA formyltransferase [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 312
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 97/318 (30%), Positives = 162/318 (50%), Gaps = 15/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT F+V L+ L +S++ +++V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPAFSVPILEQL-ASTYDVIAVVTQPDRPVG-RKRILTPPPVKKAALELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E + ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVFQPEKLRTSSELNELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITEADNTGTMFDKLSKLGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + Q +T+A IS+ + ++++ + + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITAIAQDPEKVTFARNISREQEKIDWTQPGRTIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLESQLVEG--EGKPGEVI--NPNFTIACSQGAVRI-MRLQRAGGRVLDI 294
+ K+ E+ + EG+PG ++ + I G + + +Q AG +D+
Sbjct: 238 EE----KPFKIWEATYDDTKVEGEPGTILMDKTSLKIIAGDGTLIVPTVIQPAGKPKMDV 293
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 294 HSFMSGAGRNLSKSTRFG 311
>gi|115353232|ref|YP_775071.1| methionyl-tRNA formyltransferase [Burkholderia ambifaria AMMD]
gi|122321933|sp|Q0BAT6|FMT_BURCM RecName: Full=Methionyl-tRNA formyltransferase
gi|115283220|gb|ABI88737.1| methionyl-tRNA formyltransferase [Burkholderia ambifaria AMMD]
Length = 327
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 124/321 (38%), Positives = 177/321 (55%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +P
Sbjct: 4 TLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYAVEHGMP 62
Query: 62 ALVPTKLGQEEYEQFLS---------FNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAADAIELLRTTPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + +V I+ + TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIDEARVAIAPDDTTATLHDRLAA 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V+A+ +LE++ P +PQ +G+TYAEKI K E +++ + A+ + +RA P
Sbjct: 183 DGARLIVDALVRLERDGALPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ E G+ PG +++ +AC GA+R+ +LQ+ G
Sbjct: 243 FPGGVATL--DGAAIKLWAAEPVAARGDAAPGTIVDAAPEGVIVACGSGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ G
Sbjct: 301 GKRLPAREFLAGSPLAAGQRF 321
>gi|332974244|gb|EGK11177.1| methionyl-tRNA formyltransferase [Kingella kingae ATCC 23330]
Length = 309
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 121/313 (38%), Positives = 170/313 (54%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ S V + A + L
Sbjct: 1 MKVIFAGTPDFAAAALKAIAAAGFDIPLVLTQPDRPKG-RGMQLQASPVKQVALDLGLRV 59
Query: 63 LVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL + +ADV V AYGL++PQ +L+ K G N HASLLPRWRGAA
Sbjct: 60 AQPEKLRNNAEALQMLRDVDADVMVAAAYGLILPQDVLDTPKHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I + L L A A+V
Sbjct: 120 PIQRAIEAGDAETGVCIMQMDAGLDTGAVVSEHRYTIRDTDTANEVHDALMDLGATAIVR 179
Query: 181 AMDK-LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + +++L +PQ E G+TYA+K+SK E ++N+ +AE V IRA +P P W E
Sbjct: 180 DLQQLQAKSSLHATPQPETGVTYAQKLSKEEAKINWNEAAEVVARKIRAFNPVPTVWTE- 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + +K+ + V G G V+ +AC GA+ I LQ AG + +
Sbjct: 239 ---WQGKPMKIWAAHAVAQNGSAGTVLAVDANGIVVACGSGAICITELQVAGSKRMTAAA 295
Query: 297 FLLGCPVIIGCIV 309
FL G + IG +
Sbjct: 296 FLAGRELAIGALF 308
>gi|238926273|ref|ZP_04658033.1| methionyl-tRNA formyltransferase [Selenomonas flueggei ATCC 43531]
gi|238885953|gb|EEQ49591.1| methionyl-tRNA formyltransferase [Selenomonas flueggei ATCC 43531]
Length = 315
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 96/315 (30%), Positives = 137/315 (43%), Gaps = 11/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSH--SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
+R VFMGT +F+V L A+ I +V TQP RP G RG K S V A
Sbjct: 3 PMRTVFMGTPDFSVGILAAMAERRDLMDIAAVVTQPDRPRG-RGKKLSPSPVKAWALAHD 61
Query: 60 LPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P + + + L DVAVV A+G ++ Q IL+ G N HASLLP +RG
Sbjct: 62 IPVLQPARARDAAFAEELRVLRPDVAVVAAFGQILTQEILDIPVHGCINVHASLLPLYRG 121
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQ A+M G TGI M+MD LDTG + R+VPI ++ L L A +
Sbjct: 122 AAPIQHAVMDGVAVTGITTMQMDAGLDTGDMLLRREVPIHADTTYGTLHDALMETGAALL 181
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
VE +++L L +PQ S P + E
Sbjct: 182 VETLEQLAAGTLIRTPQTGES---TYAARITRETAQIDWSRTARELDALVRGLNPVPYAE 238
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+G+ +I +L + G ++ +A V++ +Q G R++
Sbjct: 239 THLGDALYKIGMLSLTGERTDAPHGTILTADRRAGLRVAAGDEIVQVTEIQAPGKRMMAA 298
Query: 295 GDFLLGCPVIIGCIV 309
+FL GC + G
Sbjct: 299 SEFLNGCALTAGARF 313
>gi|254933295|ref|ZP_05266654.1| methionyl-tRNA formyltransferase [Listeria monocytogenes HPB2262]
gi|293584855|gb|EFF96887.1| methionyl-tRNA formyltransferase [Listeria monocytogenes HPB2262]
gi|332312264|gb|EGJ25359.1| Methionyl-tRNA formyltransferase [Listeria monocytogenes str. Scott
A]
Length = 312
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 15/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L L +S++ +V+V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPEFSVPVLTQL-ASTYDVVAVVTQPDRPVG-RKRVLTPPPVKKAALELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E E+ ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSKLGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ +T+A IS+ + ++++ + + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITAIPQDPEKVTFARNISREQEKIDWTKPGRTIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDI 294
+ K+ E+ E + G+PG ++ I G + + +Q AG +D+
Sbjct: 238 EE----KPFKIWEATYEETKEGGEPGAILADKTTLKIVAGDGTLIVPTVIQPAGKPKMDV 293
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 294 HSFMTGAGRNLSKTTRFG 311
>gi|320333259|ref|YP_004169970.1| methionyl-tRNA formyltransferase [Deinococcus maricopensis DSM
21211]
gi|319754548|gb|ADV66305.1| Methionyl-tRNA formyltransferase [Deinococcus maricopensis DSM
21211]
Length = 313
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 99/311 (31%), Positives = 148/311 (47%), Gaps = 13/311 (4%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
RV F G+ FA+ L+A + + +V V QP +P G RGLK V +A E LP
Sbjct: 7 RVAFFGSPAFALPVLEA-IRAQFEVVLVVAQPDKPVG-RGLKLTPPPVAARATELGLPLA 64
Query: 64 VPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + ADVAV AYG ++P +L + GF N H SLLP++RGAAP
Sbjct: 65 QPKKLRGNADFEATLRDSGADVAVTCAYGKILPGSLLTVPRYGFLNTHTSLLPKYRGAAP 124
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ TG IM D+ +DTGPV + I + + L LS A +V+A
Sbjct: 125 IQWALIEGERVTGTTIMVTDEGMDTGPVLLQEPLDIDLHWTSVDLSAHLSAQAARLIVDA 184
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L + Q T+A + K + RV + +A V++ R + +PG +
Sbjct: 185 L--ARVGTLSPTVQDHTLATHARMLEKDDGRVRWTDTASQVYDRYRGVYAWPGTFTTWRG 242
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+KL + G G PG V++ T+AC +GAV + +Q G R + D+
Sbjct: 243 RL----LKLNQLHPTGGHGAPGTVLSVSEAGLTVACGEGAVLVATVQPEGKRAMPAADWW 298
Query: 299 LGCPVIIGCIV 309
G +G
Sbjct: 299 RGAGGQLGDPF 309
>gi|224500054|ref|ZP_03668403.1| hypothetical protein LmonF1_10404 [Listeria monocytogenes Finland
1988]
Length = 312
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 101/318 (31%), Positives = 165/318 (51%), Gaps = 15/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L L +S++ +V+V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPEFSVPVLTQL-ASTYDVVAVVTQPDRPVG-RKRVLTPPPVKKAALELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E E+ ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS+L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSILGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + +PQ +T+A IS+ + ++++ + + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITATPQDPEKVTFARNISREQEKIDWTKPGRTIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDI 294
+ K+ E+ E + G+PG ++ I G + + +Q AG +D+
Sbjct: 238 EE----KPFKIWEATYEETKEGGEPGAILADKTILKIVAGDGTLIVPTVIQPAGKPKMDV 293
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 294 HSFMSGAGRNLSKTTRFG 311
>gi|170288210|ref|YP_001738448.1| methionyl-tRNA formyltransferase [Thermotoga sp. RQ2]
gi|229487569|sp|B1L8W7|FMT_THESQ RecName: Full=Methionyl-tRNA formyltransferase
gi|170175713|gb|ACB08765.1| methionyl-tRNA formyltransferase [Thermotoga sp. RQ2]
Length = 313
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 101/312 (32%), Positives = 162/312 (51%), Gaps = 10/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF+GT EFA L+ L+ + ++V V TQP +P G RG K + V A++ +P
Sbjct: 1 MRIVFVGTPEFAAEILEHLIKNGFNVVGVVTQPDKPRG-RGRKVEPTPVKVVAEKHRVPF 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P + ++E E S DV +V +YG ++ +++L+ LG YN H SLLP++RGA+P
Sbjct: 60 IQPESINKKEALEFLRSVGPDVIIVASYGKILGEKVLSLPSLGCYNIHPSLLPKYRGASP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQR + G+ TG+ I KM + LD GP+A R++ I L++ L L +E
Sbjct: 120 IQRVLENGEERTGVTIYKMVRELDAGPIALQREISIDPFETFDQLEKRLIELSKEMSIEF 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++KL+ ++ L Q + TYA I K + V+F + AE+V N IRA PGA +
Sbjct: 180 LEKLKVGDIELKEQDHSRATYAPMIKKEDLIVDFSKDAESVKNKIRAYDSRPGARAFLGN 239
Query: 242 GNKHERIKLLESQLVEGEG-KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+KL ++ G +PG + I +G V++ LQ G + L +
Sbjct: 240 DE----VKLFGVTAIDSSGDEPGLIHYIDREGAWIGTGKGMVKVKYLQLPGKKKLTFWEL 295
Query: 298 LLGCPVIIGCIV 309
G + G +
Sbjct: 296 RNGRLIEEGMKL 307
>gi|254826135|ref|ZP_05231136.1| methionyl-tRNA formyltransferase [Listeria monocytogenes FSL
J1-194]
gi|293595375|gb|EFG03136.1| methionyl-tRNA formyltransferase [Listeria monocytogenes FSL
J1-194]
Length = 312
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 102/318 (32%), Positives = 164/318 (51%), Gaps = 15/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L L +S++ +V+V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPEFSVPVLTQL-ASTYDVVAVVTQPDRPVG-RKRVLTPPPVKKAAIELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E E+ ++ AD+ V AYG ++P +L +TK G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESTKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSKLGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ +T+A IS+ + ++++ + + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITAIPQDPEKVTFARNISREQEKIDWTKPGRTIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLESQLVEG--EGKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDI 294
+ K+ E+ E +G+PG ++ I G + + +Q AG +D+
Sbjct: 238 EE----KPFKIWEATYEETKEDGEPGAILADKTTLKIVAGDGTLIVPTVIQPAGKPKMDV 293
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 294 HSFMTGAGRNLSKTTRFG 311
>gi|171057042|ref|YP_001789391.1| methionyl-tRNA formyltransferase [Leptothrix cholodnii SP-6]
gi|259646039|sp|B1XW99|FMT_LEPCP RecName: Full=Methionyl-tRNA formyltransferase
gi|170774487|gb|ACB32626.1| methionyl-tRNA formyltransferase [Leptothrix cholodnii SP-6]
Length = 322
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 127/325 (39%), Positives = 173/325 (53%), Gaps = 21/325 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV F GT EFA A L + ++ H + V TQP RPAG RG+K S V + A + +P
Sbjct: 3 SLRVAFAGTPEFARAALARIHAAGHDVPLVLTQPDRPAG-RGMKLQASPVKQLALDLGVP 61
Query: 62 ALVPTKLGQEEYEQ---------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + L+ DV VV AYGL++P +L +LG N HASL
Sbjct: 62 VAQPMSLRLDGKYPAEAAAAQAALLAAQIDVMVVAAYGLILPAWVLELPRLGCLNIHASL 121
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD +TGI +M+MD+ LDTG + PI TA L L+V
Sbjct: 122 LPRWRGAAPIHRAIEAGDTQTGITLMQMDQGLDTGAMLLTAVEPIGPADTTASLHDRLAV 181
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
L A +++A+D L Q G+TYA KI K E +++ A + +RA PF
Sbjct: 182 LGAELVLQALDAAAAGTLQPVVQPLEGVTYAHKIDKREAPIDWSLPAAVIERRVRAFDPF 241
Query: 233 PGAWLEMMIGNKHERIKLLESQLVE----GEGKPGEVINPN---FTIACSQGAVRIMRLQ 285
PGA + +KL +Q+V+ GEVI+ +AC +GA+ + +LQ
Sbjct: 242 PGATFSLGGD----TLKLWSAQVVDLPAGHGHAAGEVISTEGGTPLVACGEGALALTQLQ 297
Query: 286 RAGGRVLDIGDFLLGCPVIIGCIVG 310
RAGG+ L D+L PV++G G
Sbjct: 298 RAGGKRLSGRDYLQARPVVVGVRAG 322
>gi|119503585|ref|ZP_01625668.1| methionyl-tRNA formyltransferase [marine gamma proteobacterium
HTCC2080]
gi|119460647|gb|EAW41739.1| methionyl-tRNA formyltransferase [marine gamma proteobacterium
HTCC2080]
Length = 321
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 117/314 (37%), Positives = 164/314 (52%), Gaps = 13/314 (4%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
RVVF GT EFA A L ALV++ H + +V TQP RPAG RG + SAV + AQ +P L
Sbjct: 6 RVVFAGTPEFAAAHLDALVAAGHDVCAVLTQPDRPAG-RGKQIQTSAVKRLAQTNEIPVL 64
Query: 64 VPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P L E L ++ VVVAYGL++PQ ILN K G N HASLLPRWRGAAPI
Sbjct: 65 QPASLRTPESHALLEALNAEIMVVVAYGLILPQSILNIPKHGCLNVHASLLPRWRGAAPI 124
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI AGD TGI IM+MD LDTG + + I+++ + L L + ++E +
Sbjct: 125 QRAIEAGDAHTGITIMQMDAGLDTGAMVATGILDITASETSGTLHDRLIEVGPGLLLEVL 184
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ L +PQ + YA KI+K E ++++ A+ + +RA +P + +
Sbjct: 185 EDLPHRLAQATPQEDGDAIYAAKITKQEAQLDWALDAKALSRKVRAFNPTSVCFSYLG-- 242
Query: 243 NKHERIKLLESQ--LVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ER+K+ ++ PG +I +AC GA+ I Q G + L + D
Sbjct: 243 --NERLKIWQASALPTPHNRAPGHIIESGPEGIVVACGIGALNITVAQFPGAKALPVVDL 300
Query: 298 LLG--CPVIIGCIV 309
L G +
Sbjct: 301 LNGRSHQLAKNQQF 314
>gi|332670477|ref|YP_004453485.1| methionyl-tRNA formyltransferase [Cellulomonas fimi ATCC 484]
gi|332339515|gb|AEE46098.1| methionyl-tRNA formyltransferase [Cellulomonas fimi ATCC 484]
Length = 312
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 5/311 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT AV +L+AL++S H +V+V T+P AG RG S V +A E +
Sbjct: 1 MRLLFAGTPAAAVPSLEALLASRHEVVAVLTRPDARAG-RGRTLAPSPVKARALEAGIEV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + EE+ L+ + D A VVAYG ++P +L+ + G+ N H S+LP WRGAAP
Sbjct: 60 LTPARPRGEEFVARLAELDVDAAPVVAYGALLPAEVLDVPRHGWVNLHFSVLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A++AGD TG ++++ LDTGPV + L L+ A +V
Sbjct: 120 VQHALIAGDEVTGATTFRIEQGLDTGPVLGTLTETVRPRDTAGDLLTRLATSGAGLLVAT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D LE L PQ +G+++A KI + RV + V IR +P PGAW +
Sbjct: 180 LDALEDGELVAVPQPADGVSHAPKIEAEDARVRWSHPVHAVDRRIRGCTPAPGAWTTLPD 239
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPN--FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
G + +L + E PGE+ + GAV++ + G R + D+
Sbjct: 240 GARLGLGPVL-PRPDVTELAPGELRAGRREVLVGAGGGAVQLGDVTPPGKRAMPAADWAR 298
Query: 300 GCPVIIGCIVG 310
G G ++G
Sbjct: 299 GARPADGTVLG 309
>gi|78067946|ref|YP_370715.1| methionyl-tRNA formyltransferase [Burkholderia sp. 383]
gi|123756078|sp|Q39BU5|FMT_BURS3 RecName: Full=Methionyl-tRNA formyltransferase
gi|77968691|gb|ABB10071.1| methionyl-tRNA formyltransferase [Burkholderia sp. 383]
Length = 327
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 125/323 (38%), Positives = 172/323 (53%), Gaps = 20/323 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLRVVF GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +P
Sbjct: 4 TLRVVFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYAVEHGMP 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + S DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAADAIELLRSTPHDVMVVAAYGLLLPQEVLDIPRDGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + ++ I+ + TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDIGLDTGAMIEEARIAIAPDETTATLHDRLAA 182
Query: 173 LCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A + + LP +PQ +G+TYAEKI K E +++ + A+ + +RA P
Sbjct: 183 EGARLIVDALVQLERDGVLPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGK--PGEVIN---PNFTIACSQGAVRIMRLQR 286
FPG + IKL ++ V G+ PG ++ +AC GA+R+ +LQ+
Sbjct: 243 FPGGVATLDGAA----IKLWAAEPVAARGEAAPGTIVEAAPEGVVVACGSGALRVTQLQK 298
Query: 287 AGGRVLDIGDFLLGCPVIIGCIV 309
GG+ L +FL G P+ G
Sbjct: 299 PGGKRLPAREFLAGSPLAAGQRF 321
>gi|284802269|ref|YP_003414134.1| hypothetical protein LM5578_2025 [Listeria monocytogenes 08-5578]
gi|284995411|ref|YP_003417179.1| hypothetical protein LM5923_1976 [Listeria monocytogenes 08-5923]
gi|284057831|gb|ADB68772.1| hypothetical protein LM5578_2025 [Listeria monocytogenes 08-5578]
gi|284060878|gb|ADB71817.1| hypothetical protein LM5923_1976 [Listeria monocytogenes 08-5923]
Length = 312
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 100/318 (31%), Positives = 165/318 (51%), Gaps = 15/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L L +S++ +V+V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPEFSVPVLTQL-ASTYDVVAVVTQPDRPVG-RKRVLTPPPVKKAALELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E E+ ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS+L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSILGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + +PQ +T+A IS+ + ++++ + + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITATPQDPEKVTFARNISREQEKIDWTKPGRTIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDI 294
+ K+ E+ + + G+PG ++ I G + + +Q AG +D+
Sbjct: 238 EE----KPFKIWEATYEDTKEGGEPGAILADKTILKIVAGDGTLIVPTVIQPAGKPKMDV 293
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 294 HSFMSGAGRNLSKTTRFG 311
>gi|213692986|ref|YP_002323572.1| methionyl-tRNA formyltransferase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|254789339|sp|B7GUP8|FMT_BIFLI RecName: Full=Methionyl-tRNA formyltransferase
gi|213524447|gb|ACJ53194.1| methionyl-tRNA formyltransferase [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320459166|dbj|BAJ69787.1| methionyl-tRNA formyltransferase [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 328
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 96/323 (29%), Positives = 154/323 (47%), Gaps = 21/323 (6%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT + AV +L+A +V V T+P P G RG K S V KA E LP
Sbjct: 2 LKLVFAGTPDVAVPSLKAFATDPRFDVVGVITRPDAPTG-RGRKLTPSPVKAKALELGLP 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ E E +AD+A V+AYG ++P+ +L+A +G+YN H S LP+WRGAAP
Sbjct: 61 VIDLKPRSPEFMEALNDLHADIAAVIAYGNILPKNVLDAVPMGWYNLHFSNLPKWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
QRAI AGD TG + K+ + LD GP+ + ++ + L L+ A V+A
Sbjct: 121 AQRAIWAGDPTTGADVFKVGEGLDDGPIVASLTIELTGRETSGELLDRLAEEGAPMYVDA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + + Q + YA KI+ + R+++ A + IRA +P PGAW E+
Sbjct: 181 LAAVGEGTATFTAQPAECLEYAHKITVEDARISWTDEAGAIDRQIRACTPHPGAWTELFA 240
Query: 242 GNKH----------ERIKLLESQLVE-------GEGKPGE--VINPNFTIACSQGAVRIM 282
+ +L +Q + + KPGE V N + + ++
Sbjct: 241 EGPIADNDGSTAKSLTLHILAAQPADQSNPNTPADLKPGELKVGKKNVWVGTGSTPLELI 300
Query: 283 RLQRAGGRVLDIGDFLLGCPVII 305
+++ G + + D+ G +
Sbjct: 301 QVKAQGKKAMRAADWARGARLSP 323
>gi|16803863|ref|NP_465348.1| hypothetical protein lmo1823 [Listeria monocytogenes EGD-e]
gi|224501375|ref|ZP_03669682.1| hypothetical protein LmonFR_02450 [Listeria monocytogenes FSL
R2-561]
gi|254831575|ref|ZP_05236230.1| hypothetical protein Lmon1_09488 [Listeria monocytogenes 10403S]
gi|255028174|ref|ZP_05300125.1| hypothetical protein LmonL_01024 [Listeria monocytogenes LO28]
gi|21542043|sp|Q8Y676|FMT_LISMO RecName: Full=Methionyl-tRNA formyltransferase
gi|16411277|emb|CAC99901.1| fmt [Listeria monocytogenes EGD-e]
Length = 312
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 100/318 (31%), Positives = 165/318 (51%), Gaps = 15/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L L +S++ +V+V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPEFSVPVLTQL-ASTYDVVAVVTQPDRPVG-RKRVLTPPPVKKAALELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E E+ ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS+L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSILGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + +PQ +T+A IS+ + ++++ + + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITATPQDPEKVTFARNISREQEKIDWTKPGRTIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDI 294
+ K+ E+ + + G+PG ++ I G + + +Q AG +D+
Sbjct: 238 EE----KPFKIWEATYEDTKEGGEPGAILADKTTLKIVAGDGTLIVPTVIQPAGKPKMDV 293
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 294 HSFMTGAGRNLSKTTRFG 311
>gi|47096544|ref|ZP_00234134.1| methionyl-tRNA formyltransferase [Listeria monocytogenes str. 1/2a
F6854]
gi|254899480|ref|ZP_05259404.1| methionyl-tRNA formyltransferase [Listeria monocytogenes J0161]
gi|254912381|ref|ZP_05262393.1| methionyl-tRNA formyltransferase [Listeria monocytogenes J2818]
gi|254936708|ref|ZP_05268405.1| methionyl-tRNA formyltransferase [Listeria monocytogenes F6900]
gi|47015076|gb|EAL06019.1| methionyl-tRNA formyltransferase [Listeria monocytogenes str. 1/2a
F6854]
gi|258609305|gb|EEW21913.1| methionyl-tRNA formyltransferase [Listeria monocytogenes F6900]
gi|293590363|gb|EFF98697.1| methionyl-tRNA formyltransferase [Listeria monocytogenes J2818]
Length = 312
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 99/318 (31%), Positives = 163/318 (51%), Gaps = 15/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L L +S++ +V+V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPEFSVPVLTQL-ASTYDVVAVVTQPDRPVG-RKRVLTPPPVKKAALELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E E+ ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + R++PI+ NT + +LS L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQREIPITDEDNTGTMFDKLSKLGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ +T+A IS+ + ++++ + + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITAIPQDPEKVTFARNISREQEKIDWTKPGRTIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDI 294
+ K+ E+ + + G+PG ++ I G + + +Q AG +D+
Sbjct: 238 EE----KPFKIWEATYEDTKEGGEPGAILADKTILKIVAGDGTLIVPTVIQPAGKPKMDV 293
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 294 HSFMSGAGRNLSKTTRFG 311
>gi|281419746|ref|ZP_06250745.1| methionyl-tRNA formyltransferase [Prevotella copri DSM 18205]
gi|281406275|gb|EFB36955.1| methionyl-tRNA formyltransferase [Prevotella copri DSM 18205]
Length = 364
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 104/343 (30%), Positives = 158/343 (46%), Gaps = 43/343 (12%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT EFAV +L+ LV +++V+V TQP +P GR S V + A E LP
Sbjct: 6 LRIVFMGTPEFAVESLKRLVEGGYNVVAVVTQPDKPVGRHQDTLQPSQVKQYAVEHGLPV 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P K+ ++ + L VV ++P+ + K G +N HA+LLP++RGAAPI
Sbjct: 66 LQPVKMKDPDFVEQLRSYQADLQVVVAFRMLPEVVWAMPKYGTFNVHAALLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ ETG+ +D +DTG + ++ PI N + L L A +E +
Sbjct: 126 NWAVINGEKETGVTTFFLDHDIDTGRIILQKRFPIPETANVEYVYDGLMHLGAELALETI 185
Query: 183 DKLEQNNLPL--SPQIENGIT-----YAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
D L + + PQ E A KI K R++F + A+ V++ IR LSP+PGA
Sbjct: 186 DALIAADGNIGSIPQSEMIGQGAELKPAPKIFKDTCRIDFHKPAKQVYDFIRGLSPYPGA 245
Query: 236 WLEMM-------------------------------IGNKHERIKLLESQLV---EGEGK 261
W E+ K + +K+ + L G+
Sbjct: 246 WTEIKKKETVVFFDDPKGDDDYVRFPEPTAHPSHKQSTQKIQVLKIFSTHLSCMKRGDAP 305
Query: 262 PGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
G V + +AC + I LQ +G + +D FL G
Sbjct: 306 VGSLRVEGKSLQVACLDEWLIIQELQLSGKKRMDASAFLNGMK 348
>gi|111224599|ref|YP_715393.1| methionyl-tRNA formyltransferase [Frankia alni ACN14a]
gi|123142770|sp|Q0RF89|FMT_FRAAA RecName: Full=Methionyl-tRNA formyltransferase
gi|111152131|emb|CAJ63858.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Frankia alni ACN14a]
Length = 331
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 6/312 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT A+ +L+AL+ S H +V+V T+P RPAG RG K VH A E +P
Sbjct: 1 MRLVFAGTPAVALPSLRALIDSPRHEVVAVVTRPDRPAG-RGRKIKPPPVHLLADEAGIP 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + ++ D VVAYG ++P+ L + G+ N H SLLP +RGAA
Sbjct: 60 VLSPERPRDPDFLAALTDLAPDCCPVVAYGALLPREALAIPRHGWVNLHFSLLPAYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QR ++AGD+ TG ++ +++ +D+GPV + + + L L+ AH +
Sbjct: 120 PVQRTVLAGDDLTGASVFQIEPAMDSGPVFGVVTERVRPTDTSGDLLDRLADSGAHLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD ++ L PQ G+++A K++ + +++ A V RA +P PGAW
Sbjct: 180 VMDGIDDGTLQAVPQPAEGVSFAPKLTAQDALIDWTLPAVAVDRLTRAAAPAPGAWTVFR 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
L +Q V E PG ++ + + V + ++ G + D+
Sbjct: 240 DRRIKIGPVRLGAQNVPDELAPGRLVALADGAVAVGTGTAPVLLDEVRPEGRGPMKAADW 299
Query: 298 LLGCPVIIGCIV 309
G + ++
Sbjct: 300 ARGARLTDDDLL 311
>gi|94312495|ref|YP_585705.1| methionyl-tRNA formyltransferase [Cupriavidus metallidurans CH34]
gi|93356347|gb|ABF10436.1| methionyl-tRNA formyltransferase [Cupriavidus metallidurans CH34]
Length = 344
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 123/322 (38%), Positives = 166/322 (51%), Gaps = 16/322 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL- 60
LRV F GT EFA L+A+ ++ +V+V TQP RPAG RG++ S V + A E L
Sbjct: 18 PLRVAFAGTPEFARVALEAIHAAGFPVVAVLTQPDRPAG-RGMQLQASPVKQFAVEAGLG 76
Query: 61 PALVPTKLGQEEYEQFL---------SFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
P L P L ++ DV VV AYGL++P +L + G N HAS
Sbjct: 77 PVLQPRSLRRQGKYPEEAGAAVDTLAEIAPDVMVVAAYGLILPTEVLELPRHGCLNIHAS 136
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLPRWRGAAPI RAI AGD ETGI +M+MD+ LDTG + PI +T L L+
Sbjct: 137 LLPRWRGAAPIHRAIEAGDPETGITLMQMDEGLDTGAMLSRESTPIGPQDSTGTLHDTLA 196
Query: 172 VLCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
L +V+A+ +L +PQ E G+TYAEKI+K E ++ R A + N IRA +
Sbjct: 197 ALGGRMIVDALRQLAAGQPLTATPQPEAGVTYAEKIAKDEAPLDLTRPAIELANQIRAFN 256
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQG-AVRIMRLQR 286
PFPGA +++ L + PG ++ IAC G A+++ LQ+
Sbjct: 257 PFPGATVQVGDTIIKCWQALPLAAATSLPHPPGTILAADTAGVIIACGNGSALQVTELQK 316
Query: 287 AGGRVLDIGDFLLGCPVIIGCI 308
GGR FL P+ G
Sbjct: 317 PGGRRQPAQQFLQAMPLPPGTR 338
>gi|118602766|ref|YP_903981.1| methionyl-tRNA formyltransferase [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
gi|118567705|gb|ABL02510.1| methionyl-tRNA formyltransferase [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
Length = 320
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 115/308 (37%), Positives = 168/308 (54%), Gaps = 10/308 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R+VF GT EF+ L+ L+++ H IV V+ QP RP G RG V +KA E +L
Sbjct: 11 RIVFAGTPEFSAGILKTLINTKHDIVGVFCQPDRPKG-RGRVLTTCPVKEKALEHNLNIF 69
Query: 64 VPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P + + NAD+ VV AYG ++P +ILN K G N H+SLLPRWRGAAPI
Sbjct: 70 QPENLKNDKIQQILTKLNADIMVVAAYGQILPAKILNTLKYGCLNIHSSLLPRWRGAAPI 129
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI+AGD TGI IM+M++ LDTG + + I+ L +L+ L + A++E +
Sbjct: 130 QRAILAGDKITGINIMQMNEDLDTGDILLEKTCSITLIDTAQSLHDKLAKLSSSAIIEVL 189
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D L+ Q EN ITYA K+ K E +++ +SA ++ IRA +P+P A
Sbjct: 190 DNLDNLLPTA--QRENNITYAAKLKKDEAWIDWTQSAIQINRQIRAFNPYPIAQTYASSN 247
Query: 243 NKHERI-KLLESQLVEGEG--KPGEVINPNF---TIACSQGAVRIMRLQRAGGRVLDIGD 296
++ ++L + +V G PG +I N T+A GA+ + LQ +G + L+I D
Sbjct: 248 KFDTKVLRILSASVVMTNGNYNPGSIIKHNKKACTVATGGGALNLKTLQLSGKKALNIKD 307
Query: 297 FLLGCPVI 304
F +
Sbjct: 308 FSNSYKLT 315
>gi|116621864|ref|YP_824020.1| methionyl-tRNA formyltransferase [Candidatus Solibacter usitatus
Ellin6076]
gi|122254457|sp|Q023V5|FMT_SOLUE RecName: Full=Methionyl-tRNA formyltransferase
gi|116225026|gb|ABJ83735.1| methionyl-tRNA formyltransferase [Candidatus Solibacter usitatus
Ellin6076]
Length = 311
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 101/312 (32%), Positives = 160/312 (51%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF+GT FAV TL+A+V + H + +V TQP RP G RG S V + A SL
Sbjct: 1 MRLVFLGTPAFAVPTLEAVVRAGHEVAAVLTQPDRPRG-RGQNPAASPVKQAALALSLEV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYG-LVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ + E +FL A+V+ +IPQ +++ LG N HASLLP++RGA P
Sbjct: 60 YQPERVRRPEPVEFLRGIGARAMVIVGYGQIIPQNVIDLAPLGIINVHASLLPKYRGAGP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ +I+ G+ TG+ M++D LDTG + R I N L L+VL A +V+
Sbjct: 120 IQWSIVNGETRTGVTTMRIDAGLDTGDMLLKRDTEIGPEENAMELGARLAVLGADLLVKT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE + Q ++ T A + K + R+++ + A +HN +R L P+PGA
Sbjct: 180 LAGLEAGTIVPEKQDDSQATLAPLLKKEDGRIDWAQPALAIHNRVRGLQPWPGAQTTFRG 239
Query: 242 GNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
H + +S+ V PG V+ +A +GA+ ++ +Q+ G + + DF
Sbjct: 240 QPLH----IWKSRPVTAAQAAAPGAVLRTRPLLVASGEGALELLEVQQEGRKRIPAADFA 295
Query: 299 LGCPVIIGCIVG 310
G + +G
Sbjct: 296 NGQRLTENEKLG 307
>gi|312132292|ref|YP_003999631.1| fmt [Bifidobacterium longum subsp. longum BBMN68]
gi|311772915|gb|ADQ02403.1| Fmt [Bifidobacterium longum subsp. longum BBMN68]
Length = 328
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 96/323 (29%), Positives = 155/323 (47%), Gaps = 21/323 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT + AV +L+A + +V V T+P P G RG K S V A E LP
Sbjct: 2 LKLVFAGTPDVAVPSLKAFAADPRFDVVGVITRPDAPTG-RGRKLTPSPVKATALELGLP 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ E E + +AD+A V+AYG ++P+ +L+A +G+YN H S LP+WRGAAP
Sbjct: 61 VIDLKPRSPEFMEALNNLHADIAAVIAYGNILPKNVLDAVPMGWYNLHFSNLPKWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
QRAI AGD TG + K+ + LD GP+ + ++ + L L+ A V+A
Sbjct: 121 AQRAIWAGDPTTGADVFKVGEGLDDGPIVASLTIELTGRETSGELLDRLAEEGAPMYVDA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + + Q G+ YA KI+ + R+++ AE + +RA +P PGAW E+
Sbjct: 181 LAAVGEGTATFTAQPAEGLEYAHKITVEDARISWTDEAEAIDRQVRACTPHPGAWTELFA 240
Query: 242 GNK----------HERIKLLESQLV-------EGEGKPGE--VINPNFTIACSQGAVRIM 282
+ +L +Q E +PGE V N + + +
Sbjct: 241 EGPIADNDEPAAKPLTLHILAAQPAGQSNPNTPAELQPGELKVGKKNVWVGTGSTPLELT 300
Query: 283 RLQRAGGRVLDIGDFLLGCPVII 305
+++ G + + D+ G +
Sbjct: 301 QVKAQGKKAMRAADWARGARLSP 323
>gi|219847539|ref|YP_002461972.1| methionyl-tRNA formyltransferase [Chloroflexus aggregans DSM 9485]
gi|254789346|sp|B8G4D0|FMT_CHLAD RecName: Full=Methionyl-tRNA formyltransferase
gi|219541798|gb|ACL23536.1| methionyl-tRNA formyltransferase [Chloroflexus aggregans DSM 9485]
Length = 309
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 93/303 (30%), Positives = 147/303 (48%), Gaps = 8/303 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F+G+ +AV L ALV++ ++IV V TQP RPAG R + V A LP
Sbjct: 1 MRIIFLGSPSYAVHALDALVAAGYTIVGVVTQPDRPAG-RDRRLTPPPVKVAALAHGLPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P E E + DV VV AYG ++ + +L LG+ N H SLLP +RG P
Sbjct: 60 LQPETLRDPEVVETLRALQPDVGVVAAYGEILRRAVLEIPPLGYLNIHPSLLPLYRGPTP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ AI+AG+ TG+ IM++D +D+GP+ V + N T L EL L A +VE
Sbjct: 120 VAGAILAGETVTGVTIMRLDPGMDSGPILAQAMVDLPPNARTGPLTDELFRLGATLLVEV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + + L PQ + T + + K + R+++ A + RA P+P A+
Sbjct: 180 LPRYARGEIELRPQDHSQATVTKMLKKEDGRIDWTLPAIVIERMTRAYDPWPSAYTFW-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ RI + PG VI + + + A+ ++ +Q A R + +
Sbjct: 238 RGQMLRIMSAAVAPTDASATPGMVIGRSAHGHPLVQTGSDALELVEVQPASRRPMSGAAW 297
Query: 298 LLG 300
L G
Sbjct: 298 LAG 300
>gi|309780264|ref|ZP_07675015.1| methionyl-tRNA formyltransferase [Ralstonia sp. 5_7_47FAA]
gi|308920967|gb|EFP66613.1| methionyl-tRNA formyltransferase [Ralstonia sp. 5_7_47FAA]
Length = 327
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 125/325 (38%), Positives = 171/325 (52%), Gaps = 22/325 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL- 60
TLRV F GT EFA L A+ + +V+V +QP RPAG RG++ S V + A
Sbjct: 4 TLRVAFAGTPEFAQIALAAIHRTGFPVVAVLSQPDRPAG-RGMQLQASPVKQYAVTHGFA 62
Query: 61 PALV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
P L + E + + DV VV AYGL++PQ +L+ + G N HAS
Sbjct: 63 PILQPPSLRRTGKYPQEAAEAIDALAAQRPDVMVVAAYGLILPQEVLDLPRFGCINIHAS 122
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLPRWRGAAPI RAI AGD E+GI +M+MD LDTG + M +VPI T L L+
Sbjct: 123 LLPRWRGAAPIHRAIEAGDAESGITLMQMDAGLDTGDMIAMERVPIGLTDTTGTLHDTLA 182
Query: 172 VLCAHAMVEA-MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
L +VEA + L +PQ GITYAEKI+K E +++ R A + + A +
Sbjct: 183 ALGGRMVVEALAKLAQYGKLHATPQPAEGITYAEKIAKDEAALDWSRHAAALLRQVHAFN 242
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLV---EGEGKPGEVIN---PNFTIACSQGAVRIMRL 284
PFPGA + IK +++ + E +PG V+ TIAC GA+R+ +L
Sbjct: 243 PFPGASAAL----DGVAIKFWQAEALADRPAEAEPGTVLAANAEGVTIACGAGALRVTQL 298
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
Q+ GG+ L +FL G + G
Sbjct: 299 QKPGGKRLPAREFLQGLAIQPGQRF 323
>gi|120403671|ref|YP_953500.1| methionyl-tRNA formyltransferase [Mycobacterium vanbaalenii PYR-1]
gi|166215488|sp|A1T8J4|FMT_MYCVP RecName: Full=Methionyl-tRNA formyltransferase
gi|119956489|gb|ABM13494.1| methionyl-tRNA formyltransferase [Mycobacterium vanbaalenii PYR-1]
Length = 310
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 96/310 (30%), Positives = 152/310 (49%), Gaps = 12/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+ +LQ L+ S H +++V T+P AGRRG S V + A +P
Sbjct: 1 MRLVFAGTPEPALPSLQRLIDSDRHEVIAVMTRPDAVAGRRGR-PSPSPVAQLAAAHGIP 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + E+ LS + D VVAYG ++ +L G+ N H S+LP WRGAA
Sbjct: 60 VLKPARPNSGEFVAELSALSPDCCAVVAYGALLGDALLAVPAHGWVNLHFSVLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A+ AGD TG ++++ LD+GPV + I L + LSV A +
Sbjct: 120 PVQAALAAGDEVTGATTFQIERSLDSGPVYGVVTETIRPTDTAGDLLERLSVSGAGLLEA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ G++ A K++ + R+ + A V +R+++P PGAW +
Sbjct: 180 TMDGIEDGTLTAVPQPPEGVSVAPKVTVDDARIRWELPAHVVDRRVRSVTPNPGAWTMIG 239
Query: 241 IGNKHERIKLLESQLV---EGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+RIK+ + +PGE+ + + AV + +Q G + ++
Sbjct: 240 D----QRIKVGPVTVAGDGPKGLEPGEIRVDKKHIHVGTGSDAVLLGTVQPPGKKPMNAA 295
Query: 296 DFLLGCPVII 305
D+ G +
Sbjct: 296 DWARGARLDE 305
>gi|58337595|ref|YP_194180.1| methionyl-tRNA formyltransferase FMT [Lactobacillus acidophilus
NCFM]
gi|227904235|ref|ZP_04022040.1| methionyl-tRNA formyltransferase FMT [Lactobacillus acidophilus
ATCC 4796]
gi|73919398|sp|Q5FJH5|FMT_LACAC RecName: Full=Methionyl-tRNA formyltransferase
gi|58254912|gb|AAV43149.1| methionyl-tRNA formyltransferase FMT [Lactobacillus acidophilus
NCFM]
gi|227867883|gb|EEJ75304.1| methionyl-tRNA formyltransferase FMT [Lactobacillus acidophilus
ATCC 4796]
Length = 314
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 97/311 (31%), Positives = 166/311 (53%), Gaps = 13/311 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+FMGT EF+V L+ L+ + + I +V TQP + G R K + A++ LP L
Sbjct: 4 VIFMGTPEFSVPVLEGLIEAGYEIRAVVTQPDKKVG-RKQKIAKTPAKIAAEKHDLPVLQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G EE Q + +AD+ V AYG +P + L + + N H SLLP++RG APIQ
Sbjct: 63 PVKLSGSEEMNQLIDMHADLIVTAAYGQFLPTKFLKSVNIAAVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETGI IM+M K +D G + + I N L +LS+L +++ +
Sbjct: 123 YSLINGDKETGITIMEMVKKMDAGDIYAQEAIKIEPEDNAGTLFSKLSILGRDLLLKTLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ ++ +PQ + + ++ I+K + R++ +AE +N IRAL+P PGA+L +
Sbjct: 183 SIIDGSVKKTPQDPDKVVFSPNITKEQERLSIDMTAEQANNMIRALNPDPGAYLMI---- 238
Query: 244 KHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFL 298
+R K+ E+++ + G V+ F I+ + + ++ +Q +G + ++I +FL
Sbjct: 239 NGQRFKVWEAEVASDSSSLEAGTVVANKGRFAISFADNTVLNLLEVQPSGKKRMNIKNFL 298
Query: 299 L--GCPVIIGC 307
G + G
Sbjct: 299 NGQGSKFVTGE 309
>gi|157164905|ref|YP_001466335.1| methionyl-tRNA formyltransferase [Campylobacter concisus 13826]
gi|112799919|gb|EAT97263.1| methionyl-tRNA formyltransferase [Campylobacter concisus 13826]
Length = 301
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 94/312 (30%), Positives = 147/312 (47%), Gaps = 17/312 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--SL 60
+ VVFMGT ++AV L+ L + +I +V+TQP +P G R S V AQ +
Sbjct: 1 MNVVFMGTPDYAVRILRHLKEAGFNIKAVFTQPDKPVG-RKQILTPSEVKIYAQNELVGV 59
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P P L E L +VVA I + N HAS+LP++RGA+
Sbjct: 60 PVFTPNTLKDEAVVAELKTFEPKFIVVAAYGKILPGSV-LDVATCINLHASILPKYRGAS 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI+AG+ +TG+ M MD LDTG + P S +++ + + +
Sbjct: 119 PIQSAILAGEKQTGVTAMLMDAGLDTGDMLDFIYTPCESKMSSELFSELGELGGELIVKV 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ NL Q + T+ +KISK + +F A ++N RAL+P+PG +L
Sbjct: 179 LKNFE---NLKPQKQDDAQATHCKKISKSDGLFSFDEEAGQIYNKFRALTPWPGLYLASG 235
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ K+L +L E GK GE++ + +AC GAV+I LQ + + +
Sbjct: 236 L-------KILSLELSEKSGKSGEILSIEKDHVVVACKGGAVKIYELQEPSKKPTNAKAY 288
Query: 298 LLGCPVIIGCIV 309
+ G + +G +
Sbjct: 289 INGKRLSVGDEL 300
>gi|19552812|ref|NP_600814.1| methionyl-tRNA formyltransferase [Corynebacterium glutamicum ATCC
13032]
gi|62390482|ref|YP_225884.1| methionyl-tRNA formyltransferase [Corynebacterium glutamicum ATCC
13032]
gi|145295721|ref|YP_001138542.1| methionyl-tRNA formyltransferase [Corynebacterium glutamicum R]
gi|23821551|sp|Q8NQ47|FMT_CORGL RecName: Full=Methionyl-tRNA formyltransferase
gi|166214891|sp|A4QEH4|FMT_CORGB RecName: Full=Methionyl-tRNA formyltransferase
gi|21324369|dbj|BAB98993.1| Methionyl-tRNA formyltransferase [Corynebacterium glutamicum ATCC
13032]
gi|41325819|emb|CAF21608.1| METHIONYL-TRNA FORMYLTRANSFERASE [Corynebacterium glutamicum ATCC
13032]
gi|140845641|dbj|BAF54640.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 315
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 91/310 (29%), Positives = 146/310 (47%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT E AV LQ L+ S H +V+V TQP G RG SAV + AQ+ +
Sbjct: 1 MRLVFAGTPEPAVVALQKLIDSDHEVVAVLTQPDARRG-RGRTLHPSAVAELAQQHGIEV 59
Query: 63 LVP------TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
L P T+ GQ ++ D VVAYG +I + +L+ G+ N H SLLP W
Sbjct: 60 LKPTSLKADTEDGQAIRQRLAELAPDCLPVVAYGQLITKDLLDVAPHGWVNLHFSLLPAW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAP+Q +I GD TG ++D+ LDTG + + I L L+
Sbjct: 120 RGAAPVQASIREGDQITGATTFRIDEGLDTGVILSTIEDTIQPTDTADDLLTRLAYSGGD 179
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+VE M LEQ + Q ++ ++ ++++ + AE + HIRA +P PGAW
Sbjct: 180 LLVETMTGLEQGTITPRAQEGEATYASKITTQDA-QIDWSKPAEVIDRHIRAHTPGPGAW 238
Query: 237 LEMMIGNKHERIKLLESQL-VEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLD 293
++ ++ V + PG ++ + + + + +Q G ++++
Sbjct: 239 TTLVDARLKVGPISHSGEVEVAADLAPGAILAQKNSVVVGTGTTPIVLGNIQPPGKKMMN 298
Query: 294 IGDFLLGCPV 303
D+ G +
Sbjct: 299 AADWARGVQL 308
>gi|299143972|ref|ZP_07037052.1| methionyl-tRNA formyltransferase [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518457|gb|EFI42196.1| methionyl-tRNA formyltransferase [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 308
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 98/313 (31%), Positives = 157/313 (50%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ ++FM T EF + L AL + ++I +V TQ + G RG K + S + ++A L
Sbjct: 1 MNIIFMSTPEFGIDALDAL-NEKYNISAVITQVDKKRG-RGKKLLSSPIKERALALGLEV 58
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + EE ++L D+ VVVAYG ++ + +L K N HASLLP+ RGAAP
Sbjct: 59 YQPEDINSEESVKYLKSKNADLFVVVAYGQILKEEVLYLPKYYSINIHASLLPKLRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAI+ G++ TGI+IMKM+K LDTG VA + I + ++ + +
Sbjct: 119 INRAIINGESCTGISIMKMEKGLDTGDVAITDCIEIGKLSASELEKKLAKMGAKLIVEFI 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
L+ N+ Q E TYAEKI + ++F + + + + +
Sbjct: 179 EK-LKNKNVNFKKQDEELATYAEKIERETGHIDFKKMSVFEIDRLVRGL---NDRMYASS 234
Query: 242 GNKHERIKLLESQLVEG--EGKPGEVIN--PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
K ER K++E ++ + PGE+I+ I+ G V I++LQ G +++DI +
Sbjct: 235 VYKGERFKIVEVEISKDIQNKLPGEIIDSNKKLIISAIDGTVSILKLQFPGKKLMDIKSY 294
Query: 298 LLGCPVIIGCIVG 310
L G +G I+G
Sbjct: 295 LAGNSFKVGEILG 307
>gi|262280614|ref|ZP_06058398.1| methionyl-tRNA formyltransferase [Acinetobacter calcoaceticus
RUH2202]
gi|262258392|gb|EEY77126.1| methionyl-tRNA formyltransferase [Acinetobacter calcoaceticus
RUH2202]
Length = 320
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 109/320 (34%), Positives = 165/320 (51%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL+ +SH I++VYTQP R AG RG K S V + A E ++P
Sbjct: 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAG-RGQKLTPSPVKQLALEHNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + DV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 YQPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD ETGI IM+M LDTG + + PI++ +A L +L+V A
Sbjct: 120 RGAAPIQRAIATGDEETGITIMQMAAGLDTGDMMYKTYCPITAEETSASLHDKLAVQGAE 179
Query: 177 AMVEAMDKL---EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ ++ ++ + Q E+ YA K+ K E R+++ A + +IRA +P+P
Sbjct: 180 AICAVLESEATLQKYLVEREIQDESLTVYAHKLVKSEARIDWSTDAIQLDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGG 289
A++++ N S + + GE+I +AC + + +Q GG
Sbjct: 240 VAFVQLDENNALRVWSSTISSQNKANAQAGEIIAIDKQGVHVACGQDSFICLTSVQWPGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ ++ + +G I+
Sbjct: 300 KAMNAQQIAQTQKLHVGQIL 319
>gi|332285818|ref|YP_004417729.1| methionyl-tRNA formyltransferase [Pusillimonas sp. T7-7]
gi|330429771|gb|AEC21105.1| methionyl-tRNA formyltransferase [Pusillimonas sp. T7-7]
Length = 319
Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 116/318 (36%), Positives = 172/318 (54%), Gaps = 19/318 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L A++ + H + V TQP RP+G RGLK SAV + AQ +P
Sbjct: 1 MRIVFAGTPEFASQALAAILGAGHEVPLVLTQPDRPSG-RGLKLTPSAVKQTAQAAGIPV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ + D+ VV AYGL++P+ +L G +N HASLL
Sbjct: 60 CQPRSLRLDGKYPDEALAAQKALHAAAPDLMVVAAYGLILPEWVLMLPTHGCFNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPIQRAI AGD +TG+ IM+MD+ LDTG + PI+ +N + L EL+V+
Sbjct: 120 PRWRGAAPIQRAIEAGDAQTGVTIMQMDQGLDTGDMLLTHVTPITDELNASALHDELAVI 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A A++EA+D L Q L Q + G+TYA K+ K E+ ++F + A + IRA +P P
Sbjct: 180 GARAILEAIDALRQGALTAQAQPDQGVTYAAKLDKSESPLDFSQPAVVLARRIRAFNPVP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEG------EGKPGEVINP---NFTIACSQGAVRIMRL 284
G+ + + ++ + E +PG+V+ IA + G +R++ L
Sbjct: 240 GSTMSLPGLKDPVKVWNAVALPAEAYRAALTGAQPGQVLQATTQGVDIATADGVLRLLEL 299
Query: 285 QRAGGRVLDIGDFLLGCP 302
Q+AGG+ + F+ G
Sbjct: 300 QKAGGKRQPVAAFVQGWQ 317
>gi|223043748|ref|ZP_03613791.1| methionyl-tRNA formyltransferase [Staphylococcus capitis SK14]
gi|222442845|gb|EEE48947.1| methionyl-tRNA formyltransferase [Staphylococcus capitis SK14]
Length = 310
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 106/308 (34%), Positives = 172/308 (55%), Gaps = 13/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A E ++
Sbjct: 1 MS-KIIFMGTPDFSTKVLEMLI-AEHDVIAVVTQPDRPVG-RKKVMTPPPVKKVALEHNI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K EE E+ L+ +AD+ V A+G ++P+ +LNA +LG N HASLLP++RG
Sbjct: 58 DIYQPEKLKDSEELEELLTLDADLIVTAAFGQLLPESLLNAPRLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ +TGI IM M K LD G + + + I + N + +LS L A +
Sbjct: 118 APIHQAIIDGEEKTGITIMYMVKKLDAGNIISQKAINIEEDDNVGTMHDKLSFLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ ++ T+A IS+ + R+N+ +SA+++HNHIR LSP+P A+ M
Sbjct: 178 DTLPSIINETNDSIPQDDSEATFASNISREDERINWNQSAQDIHNHIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDI 294
N +KL S ++ G G PG++I I A+ + +Q AG + + +
Sbjct: 238 DDKN----LKLYSSHIISGKNGDPGKIIETTKKAIIIGTGSNDAIALTEMQLAGKKRMLV 293
Query: 295 GDFLLGCP 302
++L G
Sbjct: 294 ANYLSGVQ 301
>gi|83748631|ref|ZP_00945649.1| Methionyl-tRNA formyltransferase [Ralstonia solanacearum UW551]
gi|207741951|ref|YP_002258343.1| methionyl-trna formyltransferase protein [Ralstonia solanacearum
IPO1609]
gi|83724675|gb|EAP71835.1| Methionyl-tRNA formyltransferase [Ralstonia solanacearum UW551]
gi|206593337|emb|CAQ60264.1| methionyl-trna formyltransferase protein [Ralstonia solanacearum
IPO1609]
Length = 327
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 126/325 (38%), Positives = 171/325 (52%), Gaps = 22/325 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL- 60
TLRV F GT EFA L A+ + +V+V +QP RPAG RG+ S V + L
Sbjct: 4 TLRVAFAGTPEFAQIALAAIHQAGFPLVAVLSQPDRPAG-RGMHLQASPVKQYGISHGLG 62
Query: 61 PALVPTKLGQEEYEQFL---------SFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
P L P L + + DV VV AYGL++PQ +L+ + G N H S
Sbjct: 63 PILQPPSLRRAGKYPQEAAEAIDALSAQRPDVMVVAAYGLILPQEVLDLPRFGCINIHGS 122
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLPRWRGAAPI RAI AGD ETGI +M+MD LDTG + M VPI T L L+
Sbjct: 123 LLPRWRGAAPIHRAIEAGDAETGITLMQMDAGLDTGDMITMEHVPIGLTDTTGTLHDTLA 182
Query: 172 VLCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
L +VEA+ +L Q+ P +PQ G+TYAEKI+K E +++ R + + + A +
Sbjct: 183 ALGGRMVVEALARLAQDGRLPATPQPAEGVTYAEKIAKDEAALDWSRQSAALLRQVHAFN 242
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLV---EGEGKPGEVI---NPNFTIACSQGAVRIMRL 284
PFPGA E+ IK ++ + + +PG V+ IAC GA+R+ +L
Sbjct: 243 PFPGASAEL----DGVTIKFWQATALPDRPADAEPGTVLAADADGVVIACGAGALRVTQL 298
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
Q+ GG+ L +FL G V G
Sbjct: 299 QKPGGKRLPAREFLQGLAVRPGQRF 323
>gi|167900764|ref|ZP_02487969.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei NCTC
13177]
Length = 327
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 120/321 (37%), Positives = 175/321 (54%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYALERGMA 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAVAALDLLHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + +V I+ + TA L +L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAA 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V+A+ +LE+ +PQ +G+TYAEKI K E +++ + A + +RA P
Sbjct: 183 AGARLVVDALAELERTGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ ++ + PG +++ IAC +GA+R+ +LQ+ G
Sbjct: 243 FPGGAGTL--DGATLKLWAADAVPGRDDAAPGTIVDIGPDGVVIACGEGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ +G
Sbjct: 301 GKRLPAREFLAGAPLAVGQRF 321
>gi|167908988|ref|ZP_02496079.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 112]
gi|254295707|ref|ZP_04963164.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 406e]
gi|157806120|gb|EDO83290.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 406e]
Length = 327
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 117/321 (36%), Positives = 170/321 (52%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYALERGMA 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPVEAVAALDLLHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + +V I+ + TA L +L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAA 182
Query: 173 LCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A + ++ L +PQ +G+TYAEKI K E +++ + A + +RA P
Sbjct: 183 AGARLIVDALVELERTGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ ++ + PG +++ IAC +GA+R+ +LQ+ G
Sbjct: 243 FPGGAGTL--DGATLKLWAADAVPGRDDAAPGTIVDIGPDGVVIACGEGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ +G
Sbjct: 301 GKRLPAREFLAGAPLAVGQRF 321
>gi|170697715|ref|ZP_02888802.1| methionyl-tRNA formyltransferase [Burkholderia ambifaria IOP40-10]
gi|170137330|gb|EDT05571.1| methionyl-tRNA formyltransferase [Burkholderia ambifaria IOP40-10]
Length = 327
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 124/321 (38%), Positives = 176/321 (54%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +P
Sbjct: 4 TLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYAVEHGMP 62
Query: 62 ALVPTKLGQEEYEQFLS---------FNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAADAIELLRTTPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + +V I+ + TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIEEARVAIAPDDTTATLHDRLAA 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V+A+ +LE++ P +PQ +G+TYAEKI K E +++ + A+ + +RA P
Sbjct: 183 DGARLIVDALVRLERDGALPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ E G+ PG ++ +AC GA+R+ +LQ+ G
Sbjct: 243 FPGGVATL--DGAAIKLWAAEPVAARGDAAPGTIVEAAPEGVIVACGSGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ G
Sbjct: 301 GKRLPAREFLAGSPLAAGQRF 321
>gi|254829182|ref|ZP_05233869.1| methionyl-tRNA formyltransferase [Listeria monocytogenes FSL
N3-165]
gi|258601592|gb|EEW14917.1| methionyl-tRNA formyltransferase [Listeria monocytogenes FSL
N3-165]
Length = 312
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 102/318 (32%), Positives = 166/318 (52%), Gaps = 15/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L L +S++ +V+V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPEFSVPVLTQL-ASTYDVVAVVTQPDRPVG-RKRVLTPPPVKKAALELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E E+ ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS+L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSILGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + +PQ +T+A IS+ + ++++ + + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITATPQDPEKVTFARNISREQEKIDWKKPGRTIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDI 294
+ K+ E+ E + G+PG ++ I G + + + +Q AG +DI
Sbjct: 238 EE----KPFKIWEATYEETKEGGEPGAILADKTTLKIVAGDGTLIVPIVIQPAGKPKMDI 293
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 294 HSFMSGAGRNLSKTTRFG 311
>gi|53717763|ref|YP_106749.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei K96243]
gi|167813634|ref|ZP_02445314.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 91]
gi|73919384|sp|Q63YR6|FMT_BURPS RecName: Full=Methionyl-tRNA formyltransferase
gi|52208177|emb|CAH34108.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei K96243]
Length = 327
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 117/321 (36%), Positives = 170/321 (52%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYALERGMA 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAVAALDLLHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + +V I+ + TA L +L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAA 182
Query: 173 LCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A + ++ L +PQ +G+TYAEKI K E +++ + A + +RA P
Sbjct: 183 AGARLIVDALVELERTGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ ++ + PG +++ IAC +GA+R+ +LQ+ G
Sbjct: 243 FPGGAGTL--DGATLKLWAADAVPGRDDAAPGTIVDIGPDGVVIACGEGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ +G
Sbjct: 301 GKRLPAREFLAGAPLAVGQRF 321
>gi|296454634|ref|YP_003661777.1| methionyl-tRNA formyltransferase [Bifidobacterium longum subsp.
longum JDM301]
gi|296184065|gb|ADH00947.1| methionyl-tRNA formyltransferase [Bifidobacterium longum subsp.
longum JDM301]
Length = 328
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 96/323 (29%), Positives = 153/323 (47%), Gaps = 21/323 (6%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT + AV +L+A +V V T+P P G RG K S V A E LP
Sbjct: 2 LKLVFAGTPDVAVPSLKAFATDPRFDVVGVITRPDAPTG-RGRKLTPSPVKATALELGLP 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ E E +AD+A V+AYG ++P+ +L+A +G+YN H S LP+WRGAAP
Sbjct: 61 VIDLKPRSPEFMEALNDLHADIAAVIAYGNILPKNVLDAVPMGWYNLHFSNLPKWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
QRAI AGD TG + K+ + LD GP+ + ++ + L L+ A V+A
Sbjct: 121 AQRAIWAGDPTTGADVFKVGEGLDDGPIVASLTIELTGRETSGELLDRLAEEGAPMYVDA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + + Q + YA KI+ + R+++ AE + IRA +P PGAW E+
Sbjct: 181 LAAVGEGTATFTAQPTESLEYAHKITVKDARISWTDEAEAIDRQIRACTPHPGAWTELFA 240
Query: 242 GNKH----------ERIKLLESQLVE-------GEGKPGE--VINPNFTIACSQGAVRIM 282
+ +L +Q + E +PGE V N + + +
Sbjct: 241 EGPIADNDESTAKSLALHILAAQPADQSNPNTPAELQPGELKVGKKNVWVGTGSTPLELT 300
Query: 283 RLQRAGGRVLDIGDFLLGCPVII 305
+++ G + + D+ G +
Sbjct: 301 QVKAQGKKAMRAADWARGARLSP 323
>gi|194291226|ref|YP_002007133.1| methionyl-tRNA formyltransferase [Cupriavidus taiwanensis LMG
19424]
gi|193225061|emb|CAQ71072.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Cupriavidus taiwanensis LMG 19424]
Length = 337
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 124/322 (38%), Positives = 172/322 (53%), Gaps = 16/322 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL- 60
LRV F GT EFA L+A+ ++ +V+V TQP RPAG RG++ S V + A L
Sbjct: 6 PLRVAFAGTPEFARVALEAIHAAGFPVVAVLTQPDRPAG-RGMQLQASPVKQFAVANGLA 64
Query: 61 PALVPTKLGQEEYEQFLS---------FNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
P L P L ++ + DV VV AYGL++P +L +LG N H S
Sbjct: 65 PVLQPRSLRRQGKYPEEAAAAIDTLAGIAPDVMVVAAYGLILPAEVLALPRLGCLNIHGS 124
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLPRWRGAAPI RAI AGD ETGI +M+MD+ LDTG + VPI ++ T L L+
Sbjct: 125 LLPRWRGAAPIHRAIEAGDAETGITLMQMDEGLDTGDMLTREAVPIGADDTTGTLHDTLA 184
Query: 172 VLCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
L A +V+A+ +L+ P +PQ E G+TYAEKI+K E ++ R A + N +RA +
Sbjct: 185 ALGARMIVDALRQLDTGRPLPATPQPEQGVTYAEKIAKDEAPLDLRRPAAELANQVRAFN 244
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQR 286
PFPGA +++ + + PG V+ IAC +G A+++ LQ+
Sbjct: 245 PFPGATVQVGDTVIKCWQAVPLAAASSLPHPPGTVLAADAAGILIACGEGSALQVTELQK 304
Query: 287 AGGRVLDIGDFLLGCPVIIGCI 308
GGR FL P+ G
Sbjct: 305 PGGRRQPAQQFLQALPLPPGTR 326
>gi|169351107|ref|ZP_02868045.1| hypothetical protein CLOSPI_01886 [Clostridium spiroforme DSM 1552]
gi|169292169|gb|EDS74302.1| hypothetical protein CLOSPI_01886 [Clostridium spiroforme DSM 1552]
Length = 317
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 94/307 (30%), Positives = 160/307 (52%), Gaps = 9/307 (2%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+++FMGT+ F+ L+ L+ +++++++V TQP R G R + V + A +P
Sbjct: 5 KILFMGTASFSSCVLEKLLETNYNVIAVVTQPDRLVG-RKKILTMPEVKEVALNHDIPVY 63
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K+ ++ + L D+ + AYG +IP+ ILN KLG N HASLLP++RG AP+
Sbjct: 64 QPQKIKKDYQDL-LDLKPDLVITAAYGQMIPEAILNLPKLGCINVHASLLPKYRGGAPVH 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
AI+ G+ TG+ IM M K +D G + +V I+ + T L LS + A ++E +
Sbjct: 123 YAIINGEEVTGVTIMYMVKKMDAGNIISQEEVKIAPDETTGELYDRLSNVGAKLLIETLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL------ 237
+ Q EN +TYA IS + +++F +SA+ V+NH+R L+P+PGA+
Sbjct: 183 SIISKTNDSIEQDENLVTYAPVISHEQEKIDFNQSAKQVYNHVRGLNPWPGAYTVYQDKV 242
Query: 238 -EMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
++ G+ H + + G ++ + G I LQ AG + + + D
Sbjct: 243 VKIWAGSIHNCQNATKHHGHQENGTIVKIFKDAIGVKTGDGIYLITELQIAGKKRMLVKD 302
Query: 297 FLLGCPV 303
+L G +
Sbjct: 303 YLNGNNI 309
>gi|71276448|ref|ZP_00652724.1| Methionyl-tRNA formyltransferase [Xylella fastidiosa Dixon]
gi|71901279|ref|ZP_00683378.1| Methionyl-tRNA formyltransferase [Xylella fastidiosa Ann-1]
gi|170730999|ref|YP_001776432.1| methionyl-tRNA formyltransferase [Xylella fastidiosa M12]
gi|238687946|sp|B0U4M3|FMT_XYLFM RecName: Full=Methionyl-tRNA formyltransferase
gi|71162764|gb|EAO12490.1| Methionyl-tRNA formyltransferase [Xylella fastidiosa Dixon]
gi|71728970|gb|EAO31102.1| Methionyl-tRNA formyltransferase [Xylella fastidiosa Ann-1]
gi|167965792|gb|ACA12802.1| methionyl-tRNA formyltransferase [Xylella fastidiosa M12]
Length = 307
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 115/305 (37%), Positives = 172/305 (56%), Gaps = 9/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT +FAV +L+++ +V+VYTQP RPAG RG + + S V +A LP
Sbjct: 1 MRIVFAGTPDFAVPSLRSVTQR-ADVVAVYTQPDRPAG-RGRELMPSPVKLEAVARGLPV 58
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E + L D+ VVVAYG+++P+ +L G +N HASLLPRWRGAAP
Sbjct: 59 YQPQTLRSPEMLEQLRVLRPDLIVVVAYGVILPEAVLAIPDDGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETG+ +M+M+ LDTGPV K PI+++ + L L+ + A + +
Sbjct: 119 IQRAIEAGDTETGVCLMQMEAGLDTGPVLMSLKTPINAHETSGQLHDRLAEMGAQLLSDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ+ G+TYA K+ K E R+++ + AE + +RA P+P E++
Sbjct: 179 LGLLRAGLRPVPQPQLAAGVTYAHKLGKVEARLDWEQPAERLACRVRAFQPWPV--AEVV 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + RI + ++ PG+V+ +AC QGA+R+ RLQR GG+ + D+
Sbjct: 237 LSGERVRIHEALALDLDHSQPPGKVLAASKEGIDVACVQGALRLCRLQREGGKAITAADY 296
Query: 298 LLGCP 302
L
Sbjct: 297 LNARR 301
>gi|126454119|ref|YP_001064444.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1106a]
gi|167843769|ref|ZP_02469277.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei B7210]
gi|242314315|ref|ZP_04813331.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1106b]
gi|166214881|sp|A3NQ23|FMT_BURP0 RecName: Full=Methionyl-tRNA formyltransferase
gi|126227761|gb|ABN91301.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1106a]
gi|242137554|gb|EES23956.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1106b]
Length = 327
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 117/321 (36%), Positives = 170/321 (52%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYALERGMA 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPVEAVAALDLLHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + +V I+ + TA L +L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAA 182
Query: 173 LCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A + ++ L +PQ +G+TYAEKI K E +++ + A + +RA P
Sbjct: 183 AGARLVVDALVELERTGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ ++ + PG +++ IAC +GA+R+ +LQ+ G
Sbjct: 243 FPGGAGTL--DGATLKLWAADAVPGRDDAAPGTIVDIGPDGVVIACGEGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ +G
Sbjct: 301 GKRLPAREFLAGAPLAVGQRF 321
>gi|188993324|ref|YP_001905334.1| methionyl-tRNA formyltransferase [Xanthomonas campestris pv.
campestris str. B100]
gi|167735084|emb|CAP53296.1| unnamed protein product [Xanthomonas campestris pv. campestris]
Length = 352
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 165/306 (53%), Gaps = 9/306 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT +FAVA+L+A + H +V+VYTQP RPAG RG S V A +P
Sbjct: 45 PMRIVFAGTPDFAVASLRA-AAQLHEVVAVYTQPDRPAG-RGRGLTPSPVKLDAIARGIP 102
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E + D+ VVVAYGL++P+ +L A+ G +N HASLLPRWRGAA
Sbjct: 103 VFQPQTLRSPEALATLRALQPDLMVVVAYGLILPKAVLAASTHGCWNVHASLLPRWRGAA 162
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ +M+M+ LDTGPV +++ I L L+ L A + +
Sbjct: 163 PIQRAIEAGDTETGVCLMQMEAGLDTGPVLLSQRIEIGEQETGGQLHDRLAALGAQVLSD 222
Query: 181 A-MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
PQ G+TYA K+ K + R+++ + AE + +RA +P+P E
Sbjct: 223 GLGLLRAGIRPVAQPQPAEGVTYAHKLDKAQARLDWAQPAEELARRVRAFNPWPV--AEA 280
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
++ + R+ + + PG ++ IAC QGA+R+ LQR GG+ + D
Sbjct: 281 ILAGERVRLHGAVALDLAHRQAPGTLLAASKQGIDIACGQGALRVRVLQREGGKAITAAD 340
Query: 297 FLLGCP 302
+L
Sbjct: 341 YLNARR 346
>gi|126439129|ref|YP_001057205.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 668]
gi|134284105|ref|ZP_01770799.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 305]
gi|167717518|ref|ZP_02400754.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei DM98]
gi|217425088|ref|ZP_03456584.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 576]
gi|166214882|sp|A3N4D4|FMT_BURP6 RecName: Full=Methionyl-tRNA formyltransferase
gi|126218622|gb|ABN82128.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 668]
gi|134244557|gb|EBA44661.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 305]
gi|217392108|gb|EEC32134.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 576]
Length = 327
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 117/321 (36%), Positives = 170/321 (52%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYALERGMA 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAVAALDLLHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + +V I+ + TA L +L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAA 182
Query: 173 LCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A + ++ L +PQ +G+TYAEKI K E +++ + A + +RA P
Sbjct: 183 AGARLVVDALVELERTGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ ++ + PG +++ IAC +GA+R+ +LQ+ G
Sbjct: 243 FPGGAGTL--DGATLKLWAADAVPGRDDAAPGTIVDIGPDGVVIACGEGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ +G
Sbjct: 301 GKRLPAREFLAGAPLAVGQRF 321
>gi|227546700|ref|ZP_03976749.1| methionyl-tRNA formyltransferase [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|227212662|gb|EEI80543.1| methionyl-tRNA formyltransferase [Bifidobacterium longum subsp.
infantis ATCC 55813]
Length = 337
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 96/323 (29%), Positives = 153/323 (47%), Gaps = 21/323 (6%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT + AV +L+A +V V T+P P G RG K S V A E LP
Sbjct: 11 LKLVFAGTPDVAVPSLKAFATDPRFDVVGVITRPDAPTG-RGRKLTPSPVKATALELGLP 69
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ E E +AD+A V+AYG ++P+ +L+A +G+YN H S LP+WRGAAP
Sbjct: 70 VIDLKPRSPEFMEALNDLHADIAAVIAYGNILPKNVLDAVPMGWYNLHFSNLPKWRGAAP 129
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
QRAI AGD TG + K+ + LD GP+ + ++ + L L+ A V+A
Sbjct: 130 AQRAIWAGDPTTGADVFKVGEGLDDGPIVASLTIELTGRETSGELLDRLAEEGAPMYVDA 189
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + + Q + YA KI+ + R+++ AE + IRA +P PGAW E+
Sbjct: 190 LAAVGEGTATFTAQPAESLEYAHKITVKDARISWTDEAEAIDRQIRACTPHPGAWTELFA 249
Query: 242 GNKH----------ERIKLLESQLVE-------GEGKPGE--VINPNFTIACSQGAVRIM 282
+ +L +Q + E +PGE V N + + +
Sbjct: 250 EGPIADNDESTAKSLALHILAAQPADQSNPNTPAELQPGELKVGKKNVWVGTGSTPLELT 309
Query: 283 RLQRAGGRVLDIGDFLLGCPVII 305
+++ G + + D+ G +
Sbjct: 310 QVKAQGKKAMRAADWARGARLSP 332
>gi|82750820|ref|YP_416561.1| methionyl-tRNA formyltransferase [Staphylococcus aureus RF122]
gi|123727477|sp|Q2YXK0|FMT_STAAB RecName: Full=Methionyl-tRNA formyltransferase
gi|82656351|emb|CAI80769.1| methionyl-tRNA formyltransferase [Staphylococcus aureus RF122]
Length = 311
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 109/317 (34%), Positives = 171/317 (53%), Gaps = 15/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A ++ L
Sbjct: 1 MT-KIIFMGTPDFSTTVLEMLI-AEHDVIAVVTQPDRPVG-RKRVMTPPPVKKVAMKYDL 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G EE EQ L + D+ V A+G ++P+ +L KLG N HASLLP++RG
Sbjct: 58 PVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N N + +LSVL A +
Sbjct: 118 APIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ + T+A I + + R+++ + V N IR LSP+P A+ M
Sbjct: 178 ETLPSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N +K+ +++LVE +PG +I +A + AV I +Q AG + +
Sbjct: 238 DDTN----LKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRML 293
Query: 294 IGDFLLGCP-VIIGCIV 309
++L G +++G +
Sbjct: 294 AANYLSGAQNILVGKKL 310
>gi|325123991|gb|ADY83514.1| methionyl-tRNA formyltransferase [Acinetobacter calcoaceticus
PHEA-2]
Length = 320
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 109/320 (34%), Positives = 164/320 (51%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL+ +SH I++VYTQP R +G RG K S V + A E ++P
Sbjct: 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKSG-RGQKLTPSPVKQLALEHNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + DV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 YQPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQTVLDTPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD ETGI IM+M LDTG + + PI++ +A L +L+ A
Sbjct: 120 RGAAPIQRAIATGDEETGITIMQMAAGLDTGDMMYKTYCPITAEDTSATLHDKLAAQGAT 179
Query: 177 AMVEAMDKL---EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ ++ ++ Q E+ YA K+ K E R+++ A V + RA +P+P
Sbjct: 180 AICAVLESEATLQKYLAEREVQDESLTVYAHKLVKSEARIDWAIDAIQVDRNTRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGG 289
A++++ N L S + + GE+I +AC + + + +Q GG
Sbjct: 240 VAFVQLDENNALRVWNSLISSQSKANAQAGEIIAIDKQGVHVACGENTFICLTSVQWPGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ L+ + +G I+
Sbjct: 300 KALNAQQIAQTQKLHVGQIL 319
>gi|332663548|ref|YP_004446336.1| methionyl-tRNA formyltransferase [Haliscomenobacter hydrossis DSM
1100]
gi|332332362|gb|AEE49463.1| Methionyl-tRNA formyltransferase [Haliscomenobacter hydrossis DSM
1100]
Length = 298
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 94/302 (31%), Positives = 144/302 (47%), Gaps = 9/302 (2%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +FAV L LV + IV V T + GR + + S V K A +P L P K
Sbjct: 1 MGTPDFAVPALDILVQHGYEIVGVVTVADKMGGRGMKQVLESPVKKYAVAQGIPVLQPEK 60
Query: 68 LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127
L E+ L +V ++P+ + + LG +N H SLLPR+RGAAPI A++
Sbjct: 61 LRNPEFLAQLRDLGANLQIVVAFRMLPEVVWSMPGLGTFNLHGSLLPRYRGAAPINWAVI 120
Query: 128 AGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQ 187
GD ETG+ + +DTG + F K+ I + + + L A +++ + +E
Sbjct: 121 NGDTETGVTTFFLQHEIDTGSIIFQDKMTIGEDETAGDVHDRMMQLGAGTVLKTVQAIEA 180
Query: 188 NNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHER 247
P PQ + ++A KI ++NF +S VHN +R LSPFP AW +
Sbjct: 181 GTAPSVPQDDAQASHAPKIFHETCQINFEQSTAQVHNFVRGLSPFPAAWTTLDGQE---- 236
Query: 248 IKLLES--QLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+K+L S + + PG V + + G V+++ LQ G + + + DFL G
Sbjct: 237 LKVLRSAKETAAHDHPPGNVFSDGRSYLKFSTRDGFVQVLELQLQGRKRMLVKDFLNGYK 296
Query: 303 VI 304
V
Sbjct: 297 VQ 298
>gi|325279048|ref|YP_004251590.1| Methionyl-tRNA formyltransferase [Odoribacter splanchnicus DSM
20712]
gi|324310857|gb|ADY31410.1| Methionyl-tRNA formyltransferase [Odoribacter splanchnicus DSM
20712]
Length = 324
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 102/315 (32%), Positives = 156/315 (49%), Gaps = 13/315 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+V+MGT +FAV L+ ++ + +V V T P +PAG RG + SAV K A+E L
Sbjct: 5 KLRIVYMGTPDFAVLPLKRIIKAGFQVVGVVTNPDKPAG-RGQQLQESAVKKYAREIGLK 63
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K ++ Q L+ +V ++P+ + N LG N HASLLP +RGAAP
Sbjct: 64 ILQPEKFRDPDFLQALAELKADLQLVVAFKMLPEVVWNMPPLGTVNLHASLLPDYRGAAP 123
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RA+M G+ +G+ + + +DTG + F KV I + L EL A +++
Sbjct: 124 INRAVMNGETCSGVTTFLLKQEIDTGNIIFQEKVEIGEEMTAGELHDELMEKGADLLLKT 183
Query: 182 MDKLEQNNLPLSPQIENGITYA----EKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ +E + PL+ Q KI K + ++ + E + NHIR LSPFPGAW
Sbjct: 184 VQAMEAGDYPLTDQCGLLRGREAVLAPKIFKEDMKIRWNGKLETICNHIRGLSPFPGAWT 243
Query: 238 EMMIGNKH---ERIKLLESQLV--EGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGG 289
E+ K +K+ ++ + GEV F + G VR++ LQ +G
Sbjct: 244 ELQAVGKDGGVLTLKIFKAARIRQSHNLPAGEVRTDGKTFFDVYVEGGIVRVLELQLSGK 303
Query: 290 RVLDIGDFLLGCPVI 304
+ + DFL G +
Sbjct: 304 KRMRTEDFLRGFRLE 318
>gi|259047044|ref|ZP_05737445.1| methionyl-tRNA formyltransferase [Granulicatella adiacens ATCC
49175]
gi|259036094|gb|EEW37349.1| methionyl-tRNA formyltransferase [Granulicatella adiacens ATCC
49175]
Length = 318
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 97/308 (31%), Positives = 160/308 (51%), Gaps = 13/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M +V+FMGT EF+ L+ L+ +++V TQP R G R + V A E
Sbjct: 1 MK-KVIFMGTPEFSTGVLKRLIEEKTVEVIAVVTQPDRAVG-RKKIITPTPVKVVALEHD 58
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P K G +E E+ + +AD+ V AYG +P + LN + G N HASLLP++RG
Sbjct: 59 IPVYQPEKLSGSQELEELMQLDADLIVTAAYGQFLPTKFLNFPRFGAVNVHASLLPKYRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API AIM GD ETG+ IM+M +D G + R +PI+ + A + ++LSV+ A +
Sbjct: 119 GAPIHYAIMNGDKETGVTIMRMVAKMDAGAIISQRAIPITGEDDVASMFEKLSVVGADLL 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+E + ++ + Q E ++++ IS+ + ++++ ++A V +R L P+P ++
Sbjct: 179 IETLPEIFAGTITEVEQDEALVSFSPNISREQEQIDWNKTATEVDCFVRGLRPWPTSFTV 238
Query: 239 MMIGNKHERIKLLESQLVEGE--GKPGE--VINPNFTIACSQG-AVRIMRLQRAGGRVLD 293
+ R+K+ L + + PG + +AC G + I RLQ AG +D
Sbjct: 239 LNGN----RVKMWGVSLTDKQTAKTPGSLFIDGGRLYVACGGGTVLEITRLQPAGKAQMD 294
Query: 294 IGDFLLGC 301
F+ G
Sbjct: 295 AKAFINGF 302
>gi|315658499|ref|ZP_07911371.1| methionyl-tRNA formyltransferase [Staphylococcus lugdunensis
M23590]
gi|315496828|gb|EFU85151.1| methionyl-tRNA formyltransferase [Staphylococcus lugdunensis
M23590]
Length = 310
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 169/308 (54%), Gaps = 13/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ +V+FMGT +F+ L+ L+ H +++V TQP RP G R V K A E +
Sbjct: 1 MS-KVIFMGTPDFSTTILEMLIK-EHEVIAVVTQPDRPVG-RKRVLTPPPVKKVALEHDI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K G EE E L ++D+ V A+G ++P+ +L K G N HASLLP++RG
Sbjct: 58 AVYQPEKLKGSEELEALLQLDSDLIVTAAFGQLLPEVLLEKPKYGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I+ + N + +LS+L A +
Sbjct: 118 APIHQAIIDGETETGITIMYMVKKLDAGNIIAQQAIGITEDDNVGTMHDKLSILGADLLQ 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + + PQ ++ T+A IS+ + RV++ R+A+ +HNHIR L+P+P A+ M
Sbjct: 178 KTLPDILEGKNQSIPQDDSKATFASNISRADERVDWQRNAQEIHNHIRGLAPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE-GKPGEVI---NPNFTIAC-SQGAVRIMRLQRAGGRVLDI 294
N K+ + +++ + G+PG +I + S A+ I +Q AG + + +
Sbjct: 238 DDKNM----KIFAAHIIKNKAGEPGTIIATTKQAIIVGTQSDDAIAITDMQLAGKKRMPV 293
Query: 295 GDFLLGCP 302
++L G
Sbjct: 294 SNYLSGVQ 301
>gi|213158778|ref|YP_002321199.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii AB0057]
gi|301345910|ref|ZP_07226651.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii AB056]
gi|226704286|sp|B7I2C3|FMT_ACIB5 RecName: Full=Methionyl-tRNA formyltransferase
gi|213057938|gb|ACJ42840.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii AB0057]
Length = 320
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 113/320 (35%), Positives = 169/320 (52%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL+ +SH I++VYTQP R AG RG K S V + A E ++P
Sbjct: 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAG-RGQKLTPSPVKQLALEHNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + DV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 YQPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD+ETGI IM+M LDTG + + PI+S +A L +L+ A
Sbjct: 120 RGAAPIQRAIATGDDETGITIMQMAAGLDTGDMMYKTYCPIASEDTSATLHDKLAAQGAT 179
Query: 177 AMV---EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ E+ + L++ Q E+ YA K+ K E R+++ +A V +IRA +P+P
Sbjct: 180 AICAVLESEETLQKYLAEREVQDESLTVYAHKLVKSEARIDWSMNAVQVDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGG 289
A++++ N + S + + GE+I +AC + + + +Q GG
Sbjct: 240 VAFIQLDENNALRVWNSIISSQSKVNAQAGEIIAIDKQGVHVACGENTFICLTSVQWPGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ L+ + +G I+
Sbjct: 300 KALNAQQIAQTQKLHVGQIL 319
>gi|161526292|ref|YP_001581304.1| methionyl-tRNA formyltransferase [Burkholderia multivorans ATCC
17616]
gi|189348994|ref|YP_001944622.1| methionyl-tRNA formyltransferase [Burkholderia multivorans ATCC
17616]
gi|238687008|sp|A9AC69|FMT_BURM1 RecName: Full=Methionyl-tRNA formyltransferase
gi|160343721|gb|ABX16807.1| methionyl-tRNA formyltransferase [Burkholderia multivorans ATCC
17616]
gi|189333016|dbj|BAG42086.1| methionyl-tRNA formyltransferase [Burkholderia multivorans ATCC
17616]
Length = 327
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 124/323 (38%), Positives = 176/323 (54%), Gaps = 20/323 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E LP
Sbjct: 4 TLRVIFAGTPEFAAAALAAIHDAGFAAPLVLTQPDRPAG-RGMKLQASAVKRYALEHGLP 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAAEAIELLRATPHDVMVVAAYGLLLPQEVLDIPRHGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + ++ I+ + TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMIQASRIAIAPDDTTATLHDRLAA 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V+A+ +LE++ +PQ +G+TYAEKI K E +++ + A+ + +RA P
Sbjct: 183 DGARLIVDALARLERDGTLAATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEG--KPGEVIN---PNFTIACSQGAVRIMRLQR 286
FPG + K+ ++ G G PG ++ +AC GA+R+ +LQ+
Sbjct: 243 FPGGVATLDGAAI----KIWAAEPATGRGDAAPGTIVEAAPDGVIVACGTGALRVTQLQK 298
Query: 287 AGGRVLDIGDFLLGCPVIIGCIV 309
GG+ L +FL G P+ G
Sbjct: 299 PGGKRLPAREFLAGSPLAAGQRF 321
>gi|124516654|gb|EAY58162.1| Methionyl-tRNA formyltransferase [Leptospirillum rubarum]
Length = 319
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 97/312 (31%), Positives = 165/312 (52%), Gaps = 6/312 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+RVVFMGT + AV L+ALV +++V V+TQP +PAG RG S V + A+ +P
Sbjct: 7 KIRVVFMGTPQIAVPFLEALVEKRYAVVGVFTQPDKPAG-RGYTLHSSPVRRAAESRGIP 65
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P ++++ ++ DV VVVAYG ++P+ +L + G N HASLLP RGA+
Sbjct: 66 VMTPGSLKTEDDWRILREWSPDVIVVVAYGKILPKEMLQLPRFGCLNVHASLLPELRGAS 125
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI+ G +G+ +MKMD+ +DTGPV ++ I+ + + L +++ +++
Sbjct: 126 PIQWAILKGLAVSGLTLMKMDEGMDTGPVLDQCQIAINPDETSLTLMEKMMDQGPPFLLK 185
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + PQ N T A I K +++F ++AE V H+RA++P+PG + +
Sbjct: 186 TLPDYLLGKIQPVPQSGN-ATLAPLIRKNMGKLDFTQTAEQVDRHVRAMNPWPGTFCDSP 244
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+G + PG + + C G + +Q+AGG+ + +F
Sbjct: 245 LGILKFLSGSVWKDESGKTETPGMIWEGPKQEILVRCGAGVYCVREIQKAGGKAMSAREF 304
Query: 298 LLGCPVIIGCIV 309
L+G + G ++
Sbjct: 305 LMGHQSLPGMVL 316
>gi|229817258|ref|ZP_04447540.1| hypothetical protein BIFANG_02518 [Bifidobacterium angulatum DSM
20098]
gi|229785047|gb|EEP21161.1| hypothetical protein BIFANG_02518 [Bifidobacterium angulatum DSM
20098]
Length = 322
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 98/323 (30%), Positives = 155/323 (47%), Gaps = 14/323 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MTLR++F GT + AV +L+A + +V V T+P P G RG K S V A E
Sbjct: 1 MTLRLLFAGTPDVAVPSLRAFAADPRFEVVGVLTRPDAPTG-RGRKLAPSPVKAAAVELG 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P QE + AD+A V+AYG ++P+ +L+A LG+YN H S LP+WRGA
Sbjct: 60 IPVFTDKPRSQEFLDALAGVQADIAAVIAYGNILPKAVLDAVPLGWYNLHFSNLPKWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+QRAI AGD TG + K+ + LD GPV V ++ + L L++ A V
Sbjct: 120 APVQRAIWAGDATTGADVFKVGEGLDDGPVIASMSVALTGRETSGELLDRLALEGAPMYV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+A+ ++ PQ YA KIS + V + E++ IRA +P PGAW+ +
Sbjct: 180 DALARVGDGTARFVPQAHEQAEYAHKISVEDAHVAVHDAVESIDRQIRACTPNPGAWMNL 239
Query: 240 MIGNK---HERIKLLESQLVE-------GEGKPGEVI--NPNFTIACSQGAVRIMRLQRA 287
+ +L +Q + +PG ++ N + + ++ ++
Sbjct: 240 HASGDASESITLHVLRAQPADMQRPNVPSALEPGRLLTGKKNVWMGTGSTPLELLEVKAQ 299
Query: 288 GGRVLDIGDFLLGCPVIIGCIVG 310
G + + D+ G + +G
Sbjct: 300 GKKAMRAADWARGARLADDAYLG 322
>gi|260221952|emb|CBA31030.1| Methionyl-tRNA formyltransferase [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 342
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 119/331 (35%), Positives = 171/331 (51%), Gaps = 28/331 (8%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT EFA L L ++ H+I V +QP RPAG RG+K SAV + A E S+P
Sbjct: 7 PLRIIFAGTPEFARLALAELHAAGHTIALVMSQPDRPAG-RGMKLQASAVKQFALEHSIP 65
Query: 62 ALVPTKLGQEEYEQFLSF---------NADVAVVVAYGLVIPQRILNAT---------KL 103
P L + + ADV VV AYGL++PQ +L+ +
Sbjct: 66 VAQPRSLRLDGKFPEDAVAARQAIADAQADVMVVAAYGLILPQWVLDDMAAPQADGRVRF 125
Query: 104 GFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINT 163
G N H SLLPRWRGAAPI RAI GD ETG+ IM+MD LDTG + +PI+++ T
Sbjct: 126 GCLNIHGSLLPRWRGAAPIHRAIELGDPETGVTIMQMDAGLDTGDMLLKESLPIAADDTT 185
Query: 164 AGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVH 223
A L +++ + A +V+ + Q L Q + G+TYA KI K E + + A ++
Sbjct: 186 ATLHDKVAGMGARMIVQTLGLASQGALQPRRQPDEGVTYAHKIEKEEAPIRWSDDASSIV 245
Query: 224 NHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEG--EGKPGEVIN---PNFTIACSQGA 278
IRA +PFPGA + E +K+ +++ G + G ++ +A
Sbjct: 246 RRIRAFNPFPGATA----VMQGETLKVWGAKVGNGVASEEYGRIVAVAPGGIAVAAMNSI 301
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
V I LQR GG+ + + DFL G P+ +G
Sbjct: 302 VIITELQRPGGKRMAVSDFLRGMPLEVGAQF 332
>gi|71898894|ref|ZP_00681061.1| Methionyl-tRNA formyltransferase [Xylella fastidiosa Ann-1]
gi|71731306|gb|EAO33370.1| Methionyl-tRNA formyltransferase [Xylella fastidiosa Ann-1]
Length = 307
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 114/302 (37%), Positives = 172/302 (56%), Gaps = 9/302 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT +FAV +L+++ +V+VYTQP RPAG RG + + S V +A LP
Sbjct: 1 MRIVFAGTPDFAVPSLRSVTQR-ADVVAVYTQPDRPAG-RGRELMPSPVKLEAVARGLPV 58
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E + + D+ VVVAYG+++P+ +L G +N HASLLPRWRGAAP
Sbjct: 59 YQPQTLRSPEVLEQLRALRPDLIVVVAYGVILPEAVLTIPDDGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETG+ +M+M+ LDTGPV K PI+++ + L L+ + A + +
Sbjct: 119 IQRAIEAGDTETGVCLMQMEAGLDTGPVLMSLKTPINAHETSRQLHDRLAEMGAQLLSDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ+ G+TYA K+ K E R+++ + AE + +RA P+P E++
Sbjct: 179 LGLLHAGLRPVPQPQLAVGVTYAHKLGKVEARLDWEQPAERLACRVRAFQPWPV--AEVV 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + RI + ++ PG V+ +AC QGA+R+ RLQR GG+ + + D+
Sbjct: 237 LSGERVRIHEALALDLDHSQPPGTVLAASKEGIDVACVQGALRLCRLQREGGKAITVADY 296
Query: 298 LL 299
L
Sbjct: 297 LN 298
>gi|289667877|ref|ZP_06488952.1| methionyl-tRNA formyltransferase [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 307
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 167/305 (54%), Gaps = 9/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R +F GT +FAVA+L+A + H +V+VYTQP RPAG RG S V +A +P
Sbjct: 1 MRTIFAGTPDFAVASLRA-AAQRHEVVAVYTQPDRPAG-RGRGLTPSPVKIEAIARGIPV 58
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E S NAD+ VVVAYGL++P+ +L A G +N HASLLPRWRGAAP
Sbjct: 59 FQPQTLRSPEALATLRSLNADLMVVVAYGLILPKAVLAAPTHGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETG+ +M+M+ LDTGPV +++ I L L+ L A + +
Sbjct: 119 IQRAIEAGDTETGVCLMQMEAGLDTGPVLLSQRIEIGEQETGGQLHDRLAALGAQVLSDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ G+TYA K+ K + R+++ + A+ + +RA +P+P E +
Sbjct: 179 LGLLRAGIRPVAQPQPAEGVTYAHKLDKAQARLDWAQPAQELARRVRAFNPWPV--AEAI 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + R+ + + + PG ++ IAC +GA+R+ LQR GG+ + D+
Sbjct: 237 LAGERVRLHGAVALELAHQHPPGTLLAASKQGIDIACGEGALRVRVLQREGGKAITAADY 296
Query: 298 LLGCP 302
L
Sbjct: 297 LNARR 301
>gi|257459090|ref|ZP_05624209.1| methionyl-tRNA formyltransferase [Campylobacter gracilis RM3268]
gi|257443475|gb|EEV18599.1| methionyl-tRNA formyltransferase [Campylobacter gracilis RM3268]
Length = 306
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 96/311 (30%), Positives = 147/311 (47%), Gaps = 10/311 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--SL 60
+ +VFMGT E+A L+AL + I +V+TQP +P G R S V AQ ++
Sbjct: 1 MNIVFMGTPEYAAKILRALAEAKFEIAAVFTQPDKPVG-RKQILTPSEVKVYAQRHLPAV 59
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P P L E + +VVA I + + N HAS+LP++RGA+
Sbjct: 60 PIFQPATLKDEAVAAQIKELKPDFIVVAAYGKILPQAV-LDIAPCINLHASILPKYRGAS 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI+AG+ +TG+ M MD LDTG + P + + +
Sbjct: 119 PIQSAILAGEKQTGVTAMLMDAGLDTGDMLDFAYTPCEDKTAAQLFDELGDLAGELIVRV 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
NL Q T+ +KISK + +F SA ++N RAL+P+PG +L
Sbjct: 179 L---RNFTNLMPLKQEGAQATHCKKISKSDGLFSFEESARQIYNKFRALTPWPGIYL-AS 234
Query: 241 IGNKHERIKLLES--QLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
E L ES + E G+ + P+F +AC +GAV+I+++Q G + +D +L
Sbjct: 235 GLKILELELLHESCGRKFERAGEILHIDKPSFCVACGEGAVKIIKVQEPGKKPVDASAYL 294
Query: 299 LGCPVIIGCIV 309
G + IG ++
Sbjct: 295 NGKRLKIGDLL 305
>gi|282901171|ref|ZP_06309101.1| Methionyl-tRNA formyltransferase [Cylindrospermopsis raciborskii
CS-505]
gi|281193945|gb|EFA68912.1| Methionyl-tRNA formyltransferase [Cylindrospermopsis raciborskii
CS-505]
Length = 325
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 88/322 (27%), Positives = 150/322 (46%), Gaps = 22/322 (6%)
Query: 7 FMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
F GT FA+ TL+ L+ S +++V TQP + RG + S V A+ +L P
Sbjct: 2 FFGTPNFAIPTLKKLLNDSRFQVLAVVTQPDKRRE-RGNQLTPSPVKTLAKAHNLIVWQP 60
Query: 66 TKLGQE--EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
++ ++ + NAD +VVAYG ++ +ILN KLG N H S+LP +RGAAPIQ
Sbjct: 61 ERIKKDSGTLTKLRELNADFFIVVAYGQILSTKILNMPKLGCINVHGSILPEYRGAAPIQ 120
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+I G+ +TG+ M MD +DTG + +PI N + +L+ + ++E +
Sbjct: 121 WSIHKGERQTGVTTMLMDAGMDTGDMLLKASLPIGLLDNAQIIADQLAEIGGDLLIETVT 180
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K + + PQ ++ TYA I+K + +++ R+A +HN IR P
Sbjct: 181 KFKNGEITPIPQNDSLATYASLINKEDYYLDWSRTAIELHNQIRGFYPNCITTFRHQPLK 240
Query: 244 KHERIKLLES--------------QLVEGEGKPGEVIN--PNF--TIACSQGAVRIMRLQ 285
+ L + ++ + PG V++ I +G + + +Q
Sbjct: 241 IVATVPLESAYIQELPKEIQSKLEKVPDSSAPPGSVLSIIKGLGAVIQTGEGCLWLREVQ 300
Query: 286 RAGGRVLDIGDFLLGCPVIIGC 307
G ++ DF+ G + +G
Sbjct: 301 PTGKKLQSGWDFVNGSRLTVGE 322
>gi|295425222|ref|ZP_06817925.1| methionyl-tRNA formyltransferase [Lactobacillus amylolyticus DSM
11664]
gi|295064998|gb|EFG55903.1| methionyl-tRNA formyltransferase [Lactobacillus amylolyticus DSM
11664]
Length = 316
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 94/318 (29%), Positives = 164/318 (51%), Gaps = 14/318 (4%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M + ++FMGT +F+V L+ L++ + I +V TQP + G R K + A+
Sbjct: 1 MQMQSIIFMGTPQFSVPVLEGLINKGYEIKAVVTQPDKKVG-RKQKITKTPAKIAAEAHD 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P K G E + + +AD V AYG +P + LN+ K+ N H SLLP++RG
Sbjct: 60 IPVYQPIKLSGSPEMAELIDMHADFIVTAAYGQFLPTKFLNSVKIAAVNVHGSLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
APIQ A++ GD ETGI IM+M K +D G + + + I + N + ++LS L +
Sbjct: 120 GAPIQYALLNGDKETGITIMEMVKKMDAGDIYAQKALKIEPDDNAGTVFEKLSYLGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+E + K+ + +PQ + ++ I K + ++ +A +N IRAL+P PGA+L
Sbjct: 180 LETLPKIADGTVVKTPQDPEKVVFSPNIKKEQEKITTEMTASEANNLIRALNPDPGAYLM 239
Query: 239 MMIGNKHERIKLLESQLVEGEG--KPGEVINPNFTIA---CSQGAVRIMRLQRAGGRVLD 293
+ +R+K+ ++++ E + G V++ A + ++ LQ AG + ++
Sbjct: 240 VEG----KRLKVWKAEVAEDSSSLEAGCVVDNKKRFALSFADNSVLNLLELQPAGKKKME 295
Query: 294 IGDFLL--GCPVIIGCIV 309
+ +FL G G +
Sbjct: 296 VKNFLNGQGKKYAPGEKI 313
>gi|152966928|ref|YP_001362712.1| methionyl-tRNA formyltransferase [Kineococcus radiotolerans
SRS30216]
gi|189044517|sp|A6WCA9|FMT_KINRD RecName: Full=Methionyl-tRNA formyltransferase
gi|151361445|gb|ABS04448.1| methionyl-tRNA formyltransferase [Kineococcus radiotolerans
SRS30216]
Length = 306
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 108/308 (35%), Positives = 156/308 (50%), Gaps = 8/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+V GT E AV L AL++S H +V+V T+P AG RG K V S V +A+E LP
Sbjct: 1 MRLVLAGTPEVAVPALDALLASRHEVVAVLTRPDAAAG-RGRKQVASPVALRAREAGLPL 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K G EE+ D VVAYG ++P+ L + G+ N H SLLP WRGAAP
Sbjct: 60 LQPEKPGGEEFLAALRELAPDACPVVAYGALVPRAALEVPRFGWLNLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRA+M GD+ TG + ++++ LDTGPV P+ L L+V A +VE
Sbjct: 120 VQRAVMNGDDVTGACVFQLEEGLDTGPVHASFAEPVGPTDTAGDLLSRLAVRGAGVLVEV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D +E PQ G++ A KI+ E RV++ +A + +R +P PGAW
Sbjct: 180 LDAIEAGTAHAVPQPAEGVSLAPKITVEEARVDWAATATEIDRRVRGCTPEPGAWTTF-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ ER K+ V G + + +QG+V + +Q AG + + D+
Sbjct: 238 --RGERFKVGPVVPVPDPVPAGRIAVERKRVLVGTAQGSVVLGTVQPAGKKAMSATDWAR 295
Query: 300 GCPVIIGC 307
G G
Sbjct: 296 GTRPQPGE 303
>gi|225011858|ref|ZP_03702296.1| methionyl-tRNA formyltransferase [Flavobacteria bacterium MS024-2A]
gi|225004361|gb|EEG42333.1| methionyl-tRNA formyltransferase [Flavobacteria bacterium MS024-2A]
Length = 320
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 86/305 (28%), Positives = 146/305 (47%), Gaps = 6/305 (1%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+++F GT EFA L+ LV+ I++V T P R +G RG K SAV ++ LP L
Sbjct: 9 KIIFFGTPEFAQFCLEKLVAEGFPILAVVTAPDRKSG-RGKKINASAVKIYSEAQQLPIL 67
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P L + + L + VV ++P+ + +G N HASLLP +RGAAPI
Sbjct: 68 QPENLKDPSFSEHLKKLSPDIQVVVAFRMLPKLVWQVPSVGTINLHASLLPNYRGAAPIN 127
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
++ G+++TG+ +++ +DTG + +++ I + L +L + A ++E +
Sbjct: 128 WVLINGESKTGVTTFLINEQIDTGSILLQKEIEIETEDTLGVLHNKLLSIGAPLIIETLI 187
Query: 184 K-LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
E++ LP + QI A K++ T +N+ S N+ N IR LSP+PGAW
Sbjct: 188 GLTEKSLLPQAQQITGNENEAPKLTSENTCLNWNDSLVNLVNKIRGLSPYPGAWSFYSNK 247
Query: 243 NKHERIKLLESQLVEGEGKP--GEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ RIK+ + + G ++ IA +G + + +Q + + L
Sbjct: 248 GEEGRIKIFMASALHESHSDSLGTILIKENKILIATKEGYLNCIEVQLPNKKRMSAAALL 307
Query: 299 LGCPV 303
G
Sbjct: 308 NGYSF 312
>gi|329942409|ref|ZP_08291219.1| methionyl-tRNA formyltransferase [Chlamydophila psittaci Cal10]
gi|332287050|ref|YP_004421951.1| methionyl-tRNA formyltransferase [Chlamydophila psittaci 6BC]
gi|313847646|emb|CBY16634.1| putative methionyl-tRNA formyltransferase [Chlamydophila psittaci
RD1]
gi|325506959|gb|ADZ18597.1| methionyl-tRNA formyltransferase [Chlamydophila psittaci 6BC]
gi|328815319|gb|EGF85307.1| methionyl-tRNA formyltransferase [Chlamydophila psittaci Cal10]
gi|328914283|gb|AEB55116.1| methionyl-tRNA formyltransferase [Chlamydophila psittaci 6BC]
Length = 321
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 98/315 (31%), Positives = 170/315 (53%), Gaps = 12/315 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+L+VV+ GT +FA L L+ ++++V T+ +P +R + + S V A ++
Sbjct: 1 MSLKVVYFGTPQFAATVLADLLHHEVNVIAVVTRVDKPQ-KRSSQLIPSPVKTLALSKNI 59
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P K ++ + F ADV +VVAYG ++ Q +L+ K G YN HA LLP +RGA
Sbjct: 60 PLLQPEKASDPQFIEQLRDFEADVFIVVAYGAILRQTVLDIPKYGCYNLHAGLLPAYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQR IM G ++G +++MD +D G +A + +P+ ++ L + L+ ++
Sbjct: 120 APIQRCIMDGVTQSGNTVIRMDAGMDIGDIANVSVIPVGPDMTAGELAEALASQGGEILI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ + +PQ + + A K+SK E + + R AE V+ IR ++P PGAW
Sbjct: 180 KTLQQISDGTITHTPQDASKASIAPKLSKEEGFILWDRPAEKVYAQIRGVTPAPGAWTLY 239
Query: 240 MIGNKHERIKLL-ESQLVEGE---GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+K ER ++ ++ L + GKPG++I +AC++GA+ + +Q G V+
Sbjct: 240 SYQDKPERRLVVRKASLASSKGGYGKPGDIILSDQQELLVACAEGAICLREIQPEGKGVM 299
Query: 293 DIGDFLL---GCPVI 304
+ FL G +
Sbjct: 300 NSKSFLNGLSGHKLK 314
>gi|260553857|ref|ZP_05826125.1| methionyl-tRNA formyltransferase [Acinetobacter sp. RUH2624]
gi|260404977|gb|EEW98479.1| methionyl-tRNA formyltransferase [Acinetobacter sp. RUH2624]
Length = 320
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 113/320 (35%), Positives = 168/320 (52%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL+ +SH I++VYTQP R AG RG K S V + A E ++P
Sbjct: 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAG-RGQKLTPSPVKQLALEHNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + DV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 YQPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD ETGI IM+M LDTG + + PI++ +A L +L+ A
Sbjct: 120 RGAAPIQRAIATGDEETGITIMQMAAGLDTGDMMYKTYCPITAEDTSATLHDKLAAQGAT 179
Query: 177 AMV---EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ E+ + L++ Q E+ YA K+ K E R+++ +A V +IRA +P+P
Sbjct: 180 AICAVLESEETLQKYLAEREVQDESLTVYAHKLVKSEARIDWSINAVQVDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGG 289
A++++ N L S + + GE+I +AC + + + +Q GG
Sbjct: 240 VAFVQLDENNALRVWNSLVSSQSKAHAQAGEIIAIDKQGVHVACGENTFICLTSVQWPGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ L+ + +G I+
Sbjct: 300 KALNAQQIAQTQKLHVGQIL 319
>gi|325267953|ref|ZP_08134602.1| methionyl-tRNA formyltransferase [Kingella denitrificans ATCC
33394]
gi|324980639|gb|EGC16302.1| methionyl-tRNA formyltransferase [Kingella denitrificans ATCC
33394]
Length = 342
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 120/314 (38%), Positives = 174/314 (55%), Gaps = 11/314 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ S V + A + L
Sbjct: 30 SMKVIFAGTPDFAAAALRAIAAAGFDIPLVLTQPDRPKG-RGMQQQASPVKQAALDLGLT 88
Query: 62 ALVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P KL + S +ADV VV AYGL++PQ +L+A + G N HASLLPRWRGA
Sbjct: 89 VAQPAKLRGNDEALALLRSADADVMVVAAYGLILPQEVLDAPRHGCLNIHASLLPRWRGA 148
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD ETG+ IM+MD LDTG V + I+ + L L A A+V
Sbjct: 149 APIQRAIEAGDKETGVCIMQMDAGLDTGAVVSTHRYAIADTDTANEVHDALMHLGAQAIV 208
Query: 180 EAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ +L Q PQ E G+TYA+K+SK ++ + A+ V IRA +P P AW
Sbjct: 209 ADLQQLRQTGSLHAVPQSEEGVTYAQKLSKEGAKIRWTEPADTVARKIRAFNPVPAAWT- 267
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + +K+ ++ VE +G+ G ++ +AC + A+ I +LQ AG + +
Sbjct: 268 ---LRQGQPLKIWQAHPVERQGEAGRILAADADGIVVACGENALCITQLQPAGSKRMSAQ 324
Query: 296 DFLLGCPVIIGCIV 309
FL G + IG +
Sbjct: 325 AFLAGRTLDIGAVF 338
>gi|169794226|ref|YP_001712019.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii AYE]
gi|215481784|ref|YP_002323966.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii
AB307-0294]
gi|301510399|ref|ZP_07235636.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii AB058]
gi|332850304|ref|ZP_08432638.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii 6013150]
gi|332871588|ref|ZP_08440082.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii 6013113]
gi|226704285|sp|B7GUZ7|FMT_ACIB3 RecName: Full=Methionyl-tRNA formyltransferase
gi|229487435|sp|B0VAE0|FMT_ACIBY RecName: Full=Methionyl-tRNA formyltransferase
gi|229487450|sp|A3MAA1|FMT_ACIBT RecName: Full=Methionyl-tRNA formyltransferase
gi|169147153|emb|CAM85012.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii AYE]
gi|193078767|gb|ABO13845.2| methionyl-tRNA formyltransferase [Acinetobacter baumannii ATCC
17978]
gi|213988042|gb|ACJ58341.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii
AB307-0294]
gi|332730762|gb|EGJ62072.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii 6013150]
gi|332731442|gb|EGJ62734.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii 6013113]
Length = 320
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 113/320 (35%), Positives = 168/320 (52%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL+ +SH I++VYTQP R AG RG K S V + A E ++P
Sbjct: 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAG-RGQKLTPSPVKQLALEHNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + DV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 YQPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD+ETGI IM+M LDTG + + PI+S +A L +L+ A
Sbjct: 120 RGAAPIQRAIATGDDETGITIMQMAAGLDTGDMMYKTYCPITSEDTSATLHDKLAAQGAT 179
Query: 177 AMV---EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ E+ + L++ Q E+ YA K+ K E R+++ +A V +IRA +P+P
Sbjct: 180 AICAVLESEETLQKYLAEREVQDESLTVYAHKLVKSEARIDWSMNAVQVDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGG 289
A++++ N S + + GE+I +AC + + + +Q GG
Sbjct: 240 VAFIQLDENNALRVWNSTISSQSKVNAQAGEIIAIDKQGVHVACGENTFICLTSVQWPGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ L+ + +G I+
Sbjct: 300 KALNAQQIAQTQKLHVGQIL 319
>gi|300858539|ref|YP_003783522.1| methionyl-tRNA formyltransferase [Corynebacterium
pseudotuberculosis FRC41]
gi|300685993|gb|ADK28915.1| Methionyl-tRNA formyltransferase [Corynebacterium
pseudotuberculosis FRC41]
gi|302206251|gb|ADL10593.1| Methionyl-tRNA formyltransferase [Corynebacterium
pseudotuberculosis C231]
gi|302330809|gb|ADL21003.1| Methionyl-tRNA formyltransferase [Corynebacterium
pseudotuberculosis 1002]
gi|308276493|gb|ADO26392.1| Methionyl-tRNA formyltransferase [Corynebacterium
pseudotuberculosis I19]
Length = 313
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 101/318 (31%), Positives = 151/318 (47%), Gaps = 17/318 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E AV L+ L+ S H +V+V T+P P G RG S V AQE +
Sbjct: 1 MRLIFAGTPEPAVVALEKLLDSDHEVVAVLTRPDAPKG-RGRTLQPSPVAALAQEHGIEV 59
Query: 63 LVPTKLGQE------EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
L P + + + + D VVAYG +I Q +L+A G+ N H SLLP W
Sbjct: 60 LTPRSIKPDTPDGEVFRSRLEELSPDCIPVVAYGNLITQDLLDAVPHGWINLHFSLLPAW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAP+Q AI GD TG+ ++D+ LDTG + PIS + + L+ A
Sbjct: 120 RGAAPVQAAIRHGDPVTGVTTFRIDQGLDTGDILDTLVEPISPTDTSDDVLTRLAYAGAD 179
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+V+ MD L PQ+ +YA KI + +VN+ +A ++ IR+++P PGAW
Sbjct: 180 LLVKTMDDLASGKATPRPQVGE-ASYAHKILTEDAKVNWNATAVDIDRLIRSVTPGPGAW 238
Query: 237 LEMMIGNKHERIKLLESQLVEGEGKP---GEVI--NPNFTIACSQGAVRIMRLQRAGGRV 291
+ +R KL + E GE+I + S G V++ +Q G +
Sbjct: 239 TML----DQQRFKLGPVTYLSAEECSVDRGELIIEKNRVLVGTSHGCVKLGMIQPQGKKR 294
Query: 292 LDIGDFLLGCPVIIGCIV 309
+ D+ G G
Sbjct: 295 MQASDWARGLHNKEGLRF 312
>gi|293610443|ref|ZP_06692743.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826787|gb|EFF85152.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 320
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 111/320 (34%), Positives = 169/320 (52%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL+ +SH I++VYTQP R +G RG K S V + A E ++P
Sbjct: 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKSG-RGQKLTPSPVKQLALEHNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + DV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 YQPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQTVLDTPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD+ETGI IM+M LDTG + + PI++ +A L +L+ A
Sbjct: 120 RGAAPIQRAIATGDDETGITIMQMAAGLDTGDMMYKTYCPITAEDTSATLHDKLAAQGAT 179
Query: 177 AMV---EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ E+ + L++ Q E+ YA K+ K E R+++ +A V +IRA +P+P
Sbjct: 180 AICAVLESEETLQKYLAEREVQDESLTVYAHKLVKSEARIDWSINAVQVDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGG 289
A++++ N L + + + GE+I +AC + + + +Q GG
Sbjct: 240 VAFVQLDENNALRVWNSLIASQTKVSAQAGEIIAIDKQGVHVACGENTFICLTSVQWPGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ L+ + +G I+
Sbjct: 300 KALNAQQIAQTQKLHVGQIL 319
>gi|220909314|ref|YP_002484625.1| methionyl-tRNA formyltransferase [Cyanothece sp. PCC 7425]
gi|259646027|sp|B8HUR2|FMT_CYAP4 RecName: Full=Methionyl-tRNA formyltransferase
gi|219865925|gb|ACL46264.1| methionyl-tRNA formyltransferase [Cyanothece sp. PCC 7425]
Length = 334
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 101/333 (30%), Positives = 151/333 (45%), Gaps = 26/333 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT FAV +L+ L+ ++ V TQP + G RG + AV K A +LP
Sbjct: 1 MKIVFWGTPSFAVPSLERLLREPDCEVLGVVTQPDKRRG-RGNQLQPEAVKKVALAHNLP 59
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ ++ S AD VVVAYG ++ IL +LG N HASLLPR+RGA
Sbjct: 60 LWQPQRVKKDAATLADLRSLAADFFVVVAYGQILSPEILAMPRLGCINNHASLLPRYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ ++ G+ ETGI M MD +DTG + R + + N + Q L+ L A +V
Sbjct: 120 APIQWSLYNGETETGITTMLMDAGMDTGAMLLQRTLVVGLLENAEQVSQRLAELGADLVV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA---- 235
E + + L PQ + TYA I K + +++ +SA + N IR P
Sbjct: 180 ETLRQQVVGQLQPIPQDNSQATYAPLIKKEDYGLDWHKSAIALQNQIRGFYPDCQTSLRG 239
Query: 236 --------------WLEMMIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQG 277
+ + + PG VI N I G
Sbjct: 240 QPLKVSATLPLGSAYWSALPPEFQALAPQWTDERFAENHPPGSVIGLAKNLGPIIQTGAG 299
Query: 278 AVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ ++++Q AG R+ DF+ G + IG +G
Sbjct: 300 GLLLLQVQPAGKRIQSGWDFVNGARLQIGEQLG 332
>gi|298256362|gb|ADI71471.1| putative methionyl-tRNA formyltransferase [Amycolatopsis orientalis
subsp. vinearia]
Length = 308
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 106/312 (33%), Positives = 159/312 (50%), Gaps = 10/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L+AL+ S H +V+V T+P AG RG + V S V A E +
Sbjct: 1 MKLVFAGTPEPAVPALRALLDSGRHEVVAVVTRPDAQAG-RGRRVVRSPVGALADEHGIE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + G + + D VVAYG ++PQ L+ +LG+ N H SLLP WRGAA
Sbjct: 60 VLTPARAGDPAFLARLTELAPDACPVVAYGALLPQAALDIPRLGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG + ++ K LD GPV + I + GL L+ A ++
Sbjct: 120 PVQAAIRAGDEITGASTFRIVKELDAGPVYGVVTEAIGATDTAGGLLGRLAESGAKLLLS 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD L +L Q G++YA K++ + RV+F A V IR+++P PGAW E
Sbjct: 180 TMDGLADGSLVAREQPAEGLSYAPKVTVEDARVSFADPASAVDRQIRSVTPDPGAWAEF- 238
Query: 241 IGNKHERIKLLESQLVEGEG-KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ ER KL +++ G PGE++ + + +R+ +Q G + + D+
Sbjct: 239 ---RGERFKLGPVTVLDEPGPPPGEIVVERKRVLVGTATKPLRLGDVQAPGKKRMAATDW 295
Query: 298 LLGCPVIIGCIV 309
G + G +
Sbjct: 296 ARGTRIDQGERL 307
>gi|323519896|gb|ADX94277.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii
TCDC-AB0715]
Length = 320
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 114/320 (35%), Positives = 169/320 (52%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL+ +SH I++VYTQP R AG RG K S V + A E ++P
Sbjct: 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAG-RGQKLTPSPVKQLALEHNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + DV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 YQPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD+ETGI IM+M LDTG + + PI+S +A L +L+ A
Sbjct: 120 RGAAPIQRAIATGDDETGITIMQMAAGLDTGDMMYKTYCPITSEDTSATLHDKLAAQGAT 179
Query: 177 AMV---EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ E+ + L++ Q E+ YA K+ K E R+++ +A V +IRA +P+P
Sbjct: 180 AICAVLESEETLQKYLAEREVQDESLTVYAHKLVKSEARIDWSMNAVQVDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGG 289
A++++ N S + + K GE+I +AC + + + +Q GG
Sbjct: 240 VAFIQLDENNALRVWNSTISNQNKADAKAGEIIAIDKQGVHVACGENTFICLTSVQWPGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ L+ + +G I+
Sbjct: 300 KALNAQQIAQTQKLHVGQIL 319
>gi|166154745|ref|YP_001654863.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis 434/Bu]
gi|166155620|ref|YP_001653875.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|255348907|ref|ZP_05380914.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis 70]
gi|255503447|ref|ZP_05381837.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis 70s]
gi|255507126|ref|ZP_05382765.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis D(s)2923]
gi|301336019|ref|ZP_07224263.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis L2tet1]
gi|238687390|sp|B0B8A4|FMT_CHLT2 RecName: Full=Methionyl-tRNA formyltransferase
gi|238687407|sp|B0B9Y3|FMT_CHLTB RecName: Full=Methionyl-tRNA formyltransferase
gi|165930733|emb|CAP04230.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis 434/Bu]
gi|165931608|emb|CAP07184.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|289525575|emb|CBJ15053.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis Sweden2]
gi|296435135|gb|ADH17313.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis E/150]
gi|296438855|gb|ADH21008.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis E/11023]
Length = 316
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 107/308 (34%), Positives = 167/308 (54%), Gaps = 9/308 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+LRVV++GT +FA L+ L+ + IV V T+ +P +R K + S V + A ++
Sbjct: 1 MSLRVVYLGTPQFAATVLKTLLDAHTHIVGVVTRADKPQ-KRSSKLISSPVKQLALSKNI 59
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P K + Q + ADV +VVAYG+++ Q +L+ G YN HA LLP +RGA
Sbjct: 60 PLLQPIKTTDPAFLAQLREWQADVFIVVAYGVILKQELLDIPTYGCYNLHAGLLPAYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQR IM G +G +++MD +DTG +A + V I ++ GL + L+ ++
Sbjct: 120 APIQRCIMDGGVLSGNTVIRMDAGMDTGDIANVNYVAIGEDMTAGGLAEALAASGGELLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++E + PQ E T A K++K E +++ A V+ HIR +SP PGAW
Sbjct: 180 KTLQEIEAGTVRHVPQNEAMATLAPKLTKEEGGIHWDAPASQVYAHIRGVSPAPGAWTRY 239
Query: 240 MIGNKH-ERIKLLESQLVEGEGK---PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+ K R+ +L +++ G PGEV+ + IAC QGA+R+ +Q G +
Sbjct: 240 LSQGKEARRLGVLSARMESFSGNYGDPGEVLGVSGEDLLIACRQGALRLRMVQPEGKASM 299
Query: 293 DIGDFLLG 300
DF G
Sbjct: 300 KAKDFFNG 307
>gi|239502750|ref|ZP_04662060.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii AB900]
Length = 320
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 113/320 (35%), Positives = 170/320 (53%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL+ +SH I++VYTQP R AG RG K S V + A E ++P
Sbjct: 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAG-RGQKLTPSPVKQLALEHNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + DV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 YQPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD+ETGI IM+M LDTG + + PI+S +A L +L+ A
Sbjct: 120 RGAAPIQRAIATGDDETGITIMQMAAGLDTGDMMYKTYCPITSEDTSATLHDKLAAQGAT 179
Query: 177 AMV---EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ E+ + L++ Q E+ YA K+ K E R+++ +A V +IRA +P+P
Sbjct: 180 AICAVLESEETLQKYLAEREVQDESLTVYAHKLVKSEARIDWSMNAVQVDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGG 289
A++++ N + S + + + GE+I +AC + + + +Q GG
Sbjct: 240 VAFIQLDENNALRVWNSIISNQNKADAQAGEIIAIDKQGVHVACGENTFICLTSVQWPGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ L+ + +G I+
Sbjct: 300 KALNAQQIAQTQKLHVGQIL 319
>gi|28199633|ref|NP_779947.1| methionyl-tRNA formyltransferase [Xylella fastidiosa Temecula1]
gi|182682378|ref|YP_001830538.1| methionyl-tRNA formyltransferase [Xylella fastidiosa M23]
gi|32129528|sp|Q87AR0|FMT_XYLFT RecName: Full=Methionyl-tRNA formyltransferase
gi|238691096|sp|B2I8S3|FMT_XYLF2 RecName: Full=Methionyl-tRNA formyltransferase
gi|28057748|gb|AAO29596.1| methionyl-tRNA formyltransferase [Xylella fastidiosa Temecula1]
gi|182632488|gb|ACB93264.1| methionyl-tRNA formyltransferase [Xylella fastidiosa M23]
gi|307578660|gb|ADN62629.1| methionyl-tRNA formyltransferase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 307
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 114/305 (37%), Positives = 173/305 (56%), Gaps = 9/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT +FAV +L+++ +V+VYTQP RPAG RG + + S V +A LP
Sbjct: 1 MRIVFAGTPDFAVPSLRSVTQR-ADVVAVYTQPDRPAG-RGRELMPSPVKLEAVARGLPV 58
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E + + D+ VVVAYG+++P+ +L G +N HASLLPRWRGAAP
Sbjct: 59 YQPQTLRSPEVLEQLRALRPDLIVVVAYGVILPEAVLTIPDDGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETG+ +M+M+ LDTGPV K PI+++ + L L+ + A + +
Sbjct: 119 IQRAIEAGDTETGVCLMQMEAGLDTGPVLMSLKTPINAHETSGQLHDRLAEMGAQLLSDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ+ G+TYA K+ K E+R+++ + AE + +RA P+P E++
Sbjct: 179 LGLLRAGLRPVPQPQLAVGVTYAHKLGKVESRLDWEQPAERLACRVRAFQPWPV--AEVV 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + RI + ++ PG V+ +AC QGA+R+ RLQR GG+ + + D+
Sbjct: 237 LSGERVRIHEALALDLDHSQPPGTVLAASKEGIDVACVQGALRLCRLQREGGKAITVADY 296
Query: 298 LLGCP 302
L
Sbjct: 297 LNARR 301
>gi|322691664|ref|YP_004221234.1| methionyl-tRNA formyltransferase [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320456520|dbj|BAJ67142.1| methionyl-tRNA formyltransferase [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 328
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 97/323 (30%), Positives = 154/323 (47%), Gaps = 21/323 (6%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT + AV +L+A +V V T+P P G RG K S V A E LP
Sbjct: 2 LKLVFAGTPDVAVPSLKAFATDPRFDVVGVITRPDAPTG-RGRKLTPSPVKATALELGLP 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ E E +AD+A V+AYG ++P+ +L+A LG+YN H S LP+WRGAAP
Sbjct: 61 VIDLKPRSPEFMEALNDLHADIAAVIAYGNILPKNVLDAVPLGWYNLHFSNLPKWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
QRAI AGD TG + K+ + LD GP+ + ++ + L L+ A V+A
Sbjct: 121 AQRAIWAGDPTTGADVFKVGEGLDDGPIVASLTIELTGRETSGELLDRLAEEGAPMYVDA 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + + Q G+ YA KI+ + R+++ AE + +RA +P PGAW E+
Sbjct: 181 LAAVGEGTATFTAQPAEGLEYAHKITVEDARISWTDEAEAIDRQVRACTPHPGAWTELFA 240
Query: 242 GNK----------HERIKLLESQLVE-------GEGKPGE--VINPNFTIACSQGAVRIM 282
+ +L +Q + E +PGE V N + + +
Sbjct: 241 EGPIADNDEPAAKPLTLHILAAQPADQSNPNTPAELQPGELKVGKKNVWVGTGSTPLELT 300
Query: 283 RLQRAGGRVLDIGDFLLGCPVII 305
+++ G + + D+ G +
Sbjct: 301 QVKAQGKKAMRAADWARGARLSP 323
>gi|148244857|ref|YP_001219551.1| methionyl-tRNA formyltransferase [Candidatus Vesicomyosocius
okutanii HA]
gi|146326684|dbj|BAF61827.1| methionyl-tRNA formyltransferase [Candidatus Vesicomyosocius
okutanii HA]
Length = 322
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 115/309 (37%), Positives = 177/309 (57%), Gaps = 10/309 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R+ F GT++F+VA L+ L+++ + IV VY QP RP G RG V +KA E++L
Sbjct: 11 RIAFAGTTKFSVAILEILINAKYDIVGVYCQPDRPKG-RGRILTACPVKEKALEYNLKIF 69
Query: 64 VPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P L + +Q L+ DV +VV+YG ++P+RILN K G N H+SLLPRWRGAAPI
Sbjct: 70 QPENLQSTKTQQALAKLNADVMIVVSYGQILPERILNMLKYGCLNIHSSLLPRWRGAAPI 129
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI+AGD TGI+I++M+K LDTG + + I+ N T L +L L ++A+VE +
Sbjct: 130 QRAILAGDKITGISIIQMNKILDTGDILLEKNCTITLNDTTQSLHNKLVKLGSNAIVEVL 189
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ L+ + Q +N ITYA+K+ K E +++ +SA +H IRA +P+P
Sbjct: 190 NNLDNLSPT--EQSKNNITYAKKLKKNEAWIDWTQSAIQIHQKIRAFNPYPITQTHASSN 247
Query: 243 NK-HERIKLLESQLV--EGEGKPGEVINPNF---TIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +++ + +V PG +I N +A GA+ + +Q +G +VL+I D
Sbjct: 248 RFATKILRIFSASIVVTNDNYSPGNIIKHNKKICIVATGDGALSLETVQLSGKKVLNIKD 307
Query: 297 FLLGCPVII 305
F +
Sbjct: 308 FSNAYKLTK 316
>gi|134297375|ref|YP_001121110.1| methionyl-tRNA formyltransferase [Burkholderia vietnamiensis G4]
gi|166214883|sp|A4JJ22|FMT_BURVG RecName: Full=Methionyl-tRNA formyltransferase
gi|134140532|gb|ABO56275.1| methionyl-tRNA formyltransferase [Burkholderia vietnamiensis G4]
Length = 327
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 123/321 (38%), Positives = 177/321 (55%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +P
Sbjct: 4 TLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYAVEHGMP 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKFPAEAAEAIELLRATPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + ++ I+ + TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIDEARIAIAPDDTTATLHDRLAA 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V A+++LE++ P +PQ +G+TYAEKI K E +++ ++A+ + +RA P
Sbjct: 183 DGARLIVAALERLERDGALPATPQPADGVTYAEKIGKHEAALDWRKAADVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ E G+ PG ++ +AC GA+R+ +LQ+ G
Sbjct: 243 FPGGVATL--DGAAIKLWAAEPVAARGDAAPGTIVEAAPEGVIVACGAGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ G
Sbjct: 301 GKRLPAREFLAGSPLAAGQRF 321
>gi|262195800|ref|YP_003267009.1| methionyl-tRNA formyltransferase [Haliangium ochraceum DSM 14365]
gi|262079147|gb|ACY15116.1| methionyl-tRNA formyltransferase [Haliangium ochraceum DSM 14365]
Length = 328
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 109/320 (34%), Positives = 171/320 (53%), Gaps = 15/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMG+ +FAV LQAL+ H + V TQP + G RG + V A+ +P
Sbjct: 1 MRVVFMGSPDFAVPPLQALLE-EHEVALVVTQPDKRVG-RGKRLGAPPVKDVARAAGVPV 58
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P E + A++ VVVAYG ++P+ +L A G N HASLLP++RGAAP
Sbjct: 59 VQPRSARAPELLEALRETGAELGVVVAYGKILPKAVLEAFPRGCINVHASLLPQYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A+ G+ ETG+ IM++D+ +DTGP+ R + I++N L Q L+ L A ++E
Sbjct: 119 IQWALAGGERETGVTIMQLDEGMDTGPMRKKRALAITANDTAGTLFQRLAPLGAELLLEV 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW----- 236
MD+L +PQ ++A + K + V++ RSA V HIRA+ P+PGA+
Sbjct: 179 MDELAAGTSVATPQDHEAASHARMLKKDDGAVDWSRSASEVDCHIRAMDPWPGAFSAIGD 238
Query: 237 LEMMIGNKHERIKLLESQLVEGEG----KPGEVI---NPNFTIACSQGAVRIMRLQRAGG 289
+ + + +++ G +PG+++ + +AC +GAV I LQ +GG
Sbjct: 239 TRIKLFLSRVAPEASVAEVGAEAGVHAPEPGQILGVDDDGLHVACGRGAVCIAGLQASGG 298
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
R + F G + G ++
Sbjct: 299 RRISARAFASGHALPTGAML 318
>gi|38233908|ref|NP_939675.1| methionyl-tRNA formyltransferase [Corynebacterium diphtheriae NCTC
13129]
gi|73919387|sp|Q6NH23|FMT_CORDI RecName: Full=Methionyl-tRNA formyltransferase
gi|38200169|emb|CAE49850.1| methionyl-tRNA formyltransferase [Corynebacterium diphtheriae]
Length = 311
Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 102/316 (32%), Positives = 148/316 (46%), Gaps = 15/316 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E AV L L+ S H +V+V T+P G RG S V + AQ+ +
Sbjct: 1 MRLIFAGTPEPAVVVLSRLLESEHEVVAVLTRPDARRG-RGRTLHPSPVSELAQQHGIEV 59
Query: 63 LVPTKLGQEEYEQF------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
L P + + D VVAYG +I + +L A G+ N H SLLPRW
Sbjct: 60 LTPATIKPNTPDGDAFRARLTELAPDCVPVVAYGNLITEDLLQAVPHGWINLHFSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAP+Q AI AGD TG ++DK LDTG + + PI S L L+ A
Sbjct: 120 RGAAPVQAAIAAGDTSTGATTFRIDKGLDTGQILGVIHEPIQSTDTADDLLTRLAYSGAD 179
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+V MD L Q S Q TYA KI+ + R+ + AE V HIRA++P PGAW
Sbjct: 180 LLVNTMDNLAQGIATYSEQ-IGTATYAPKITTEDARIQWTHPAEAVDKHIRAVTPGPGAW 238
Query: 237 LEMMIGNKHERIKLLESQLV-EGEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ +R K+ + E + +PG + + + + ++Q G + +
Sbjct: 239 SLLGD----QRFKIGPVSVAEESDLQPGHMRIEKNRVLVGTGDLNIELDQIQPQGKKRMK 294
Query: 294 IGDFLLGCPVIIGCIV 309
D+ G G ++
Sbjct: 295 ASDWARGLQNTEGLVL 310
>gi|229822832|ref|ZP_04448902.1| hypothetical protein GCWU000282_00121 [Catonella morbi ATCC 51271]
gi|229787645|gb|EEP23759.1| hypothetical protein GCWU000282_00121 [Catonella morbi ATCC 51271]
Length = 331
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 97/320 (30%), Positives = 166/320 (51%), Gaps = 13/320 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M +++FMGT +FA LQ L+ +S+ +++V TQP RP G R S V + A
Sbjct: 1 MK-KIIFMGTPQFAAEILQGLLEHASYQVIAVVTQPDRPVG-RKRVLTQSPVKQLALAHD 58
Query: 60 LPALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P ++ + E E+ ++ +AD+ V AYG IP R++N+T N HASLLP++RG
Sbjct: 59 IPLYQPERISRSEELEELINLDADIIVTAAYGQFIPTRLINSTPHTAINVHASLLPKYRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPI AI GD+ETGI+I+ M K +D G + R I S+ GL ++L+++ +
Sbjct: 119 AAPIHYAIWKGDHETGISIIYMTKEMDAGDILAQRSCVIESDETVGGLFEKLAIIGRELL 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL- 237
++ + KL N + Q + + ++ I+K + ++N+ SA V H+RA +PFP +
Sbjct: 179 LDTLFKLFANEITAVEQDVSQVVFSPSITKEQEQLNWHESAHQVDCHVRAFNPFPSTYTV 238
Query: 238 --EMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVR-IMRLQRAGGRV 291
++ I + E + +PG ++ + + C + I Q +G +
Sbjct: 239 LGDLRIKVWAGAPMVYEPSPEDQAAEPGTILAYKRKHLIVKCGHHSYYGIREWQESGKKR 298
Query: 292 LDIGDFLLGCPVI--IGCIV 309
L + D+ G + G +
Sbjct: 299 LSLEDYFKGNDLAQLAGQVF 318
>gi|257068775|ref|YP_003155030.1| methionyl-tRNA formyltransferase [Brachybacterium faecium DSM 4810]
gi|256559593|gb|ACU85440.1| methionyl-tRNA formyltransferase [Brachybacterium faecium DSM 4810]
Length = 317
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 159/308 (51%), Gaps = 10/308 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT + A+ +L+ L+ S H +V V T+P P+G RG K S V A E +P
Sbjct: 1 MRLLFAGTPDAALPSLRTLLDSHHEVVGVLTRPDAPSG-RGRKLRPSPVKALALEAGVPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P+ + +Q D A VVAYG +IP L+ + G+ N H SLLP WRGAAP
Sbjct: 60 LTPSTLRDETVQQQIRDLAPDAAPVVAYGNLIPPAALDIPRHGWVNLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRA++AG +TG+++ +++K LDTG + + I + L + +++ A ++ A
Sbjct: 120 VQRAVLAGQEQTGMSVFRIEKGLDTGDLLTIAPTTIGPFETSGELLERMAIEGAAVLLGA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D LE L+PQ + T+A K++ E R+++ AE V HIR +SP PGAW +
Sbjct: 180 LDALEDGTAGLTPQDHDRATHAAKLTTAEARIDWSLPAEQVRAHIRGMSPQPGAWTLLDG 239
Query: 242 GNKHERIKLL--ESQLVEGEGKPGEVINPN--FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
R K+L E+ PG + + A+ I L AG R + D+
Sbjct: 240 A----RTKILGVEAAAEPTALPPGRIAAGRRQVLVGTGTDAIAISTLAPAGKRPMRAADW 295
Query: 298 LLGCPVII 305
G +
Sbjct: 296 ARGANLAE 303
>gi|319778866|ref|YP_004129779.1| Methionyl-tRNA formyltransferase [Taylorella equigenitalis MCE9]
gi|317108890|gb|ADU91636.1| Methionyl-tRNA formyltransferase [Taylorella equigenitalis MCE9]
Length = 318
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 118/318 (37%), Positives = 166/318 (52%), Gaps = 19/318 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VF GT +FA +AL+ S H I V TQP RPAG RG+K S V A +
Sbjct: 1 MKIVFAGTPDFARVAYEALLESGHEIPLVMTQPDRPAG-RGMKLQSSPVKVSALNHNSKV 59
Query: 63 LVP--------------TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNG 108
+ P + E + + DV VV AYGL++PQ +L+ + G N
Sbjct: 60 IQPVSLRLTVGKLGPQAVEQATEAKRELENIKPDVMVVAAYGLILPQWVLDLPRYGCLNI 119
Query: 109 HASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQ 168
HASLLPRWRGAAPIQRAI AGD ETGI+IM+MD LDTG V M+ + +N++ L
Sbjct: 120 HASLLPRWRGAAPIQRAIEAGDAETGISIMQMDAGLDTGDVLLMKSL-AIDGMNSSQLHD 178
Query: 169 ELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRA 228
+L+VL A+ E M +E Q E GITYAEKI+K E +++ E + IRA
Sbjct: 179 KLAVLGGDAITEVMSNIESFRRTPKKQPEEGITYAEKIAKSEGLLDWNEETEILERKIRA 238
Query: 229 LSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQ 285
+PFPG L + + + PG+V+ +A G +R++ LQ
Sbjct: 239 FNPFPGVTLALPNLEVKVWKSAVSDLKKPADAIPGQVLKISSEGIEVATKDGVLRLLELQ 298
Query: 286 RAGGRVLDIGDFLLGCPV 303
+AG + D+ F+ G +
Sbjct: 299 KAGAKKQDVATFINGWHL 316
>gi|281411747|ref|YP_003345826.1| methionyl-tRNA formyltransferase [Thermotoga naphthophila RKU-10]
gi|281372850|gb|ADA66412.1| methionyl-tRNA formyltransferase [Thermotoga naphthophila RKU-10]
Length = 313
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 102/312 (32%), Positives = 162/312 (51%), Gaps = 10/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF+GT EFA L+ L+ + ++V V TQP +P G RG K + V A++ +P
Sbjct: 1 MRIVFVGTPEFAAEILEHLIKNGFNVVGVVTQPDKPRG-RGRKVEPTPVKVVAEKHGVPF 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P + ++E E S DV +V +YG ++ +++L+ LG YN H SLLP++RGA+P
Sbjct: 60 IQPESINKKEALEFLRSVGPDVIIVASYGKILGEKVLSLPSLGCYNIHPSLLPKYRGASP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQR + G+ TG+ I KM K LD GP+A R++ I L++ L L +E
Sbjct: 120 IQRVLENGEERTGVTIYKMVKELDAGPIALQREISIDPFETFDQLEKRLIELSKEMSIEF 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++KL+ ++ L Q + TYA I K + V+F + AE+V N IRA PGA +
Sbjct: 180 LEKLKVGDIELKEQDHSRATYAPMIKKEDLIVDFSKDAESVKNKIRAYDSKPGARAFLGN 239
Query: 242 GNKHERIKLLESQLVEGEG-KPGE---VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+KL ++ G +PG + I +G V++ +Q G R + +
Sbjct: 240 DE----VKLFGVTAIDSSGDEPGLINYINKEGAWIGTGRGKVKVGCIQFPGKRKMTFWEA 295
Query: 298 LLGCPVIIGCIV 309
G +I G
Sbjct: 296 KNGRLIIEGMRF 307
>gi|58424803|gb|AAW73840.1| 10-Formyltetrahydrofolate:L-methionyl-tRNA N-formyltransferase
[Xanthomonas oryzae pv. oryzae KACC10331]
Length = 377
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 112/306 (36%), Positives = 165/306 (53%), Gaps = 9/306 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++R++F GT +FAVA+L+A + H +V+VYTQP RPAG RG S V +A +
Sbjct: 70 SMRIIFAGTPDFAVASLRA-AAQRHEVVAVYTQPDRPAG-RGRGLTPSPVKIEAIARGIA 127
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E S NAD+ VVVAYGL++P +L G +N HASLLPRWRGAA
Sbjct: 128 VFQPQTLRSPEALATLRSLNADLMVVVAYGLILPNAVLAVPTHGCWNVHASLLPRWRGAA 187
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ +M+M+ LD GPV +++ I L L+ L A + +
Sbjct: 188 PIQRAIEAGDTETGVCLMQMEAGLDIGPVLLSQRIEIGEQETGGQLHDRLAALGAQVLSD 247
Query: 181 A-MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
PQ G+TYA K+ K + R+++ + A+ + +RA +P+P E
Sbjct: 248 GLGLLRAGIRPVAQPQPAEGVTYAHKLDKAQARLDWAQPAQELARRVRAFNPWPV--AEA 305
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
++ + R+ + + + PG ++ IAC QGA+R+ LQR GG+ + D
Sbjct: 306 ILAGERVRLHGAVALELAHQQPPGSLLAASKQGIDIACGQGALRVRVLQREGGKAITAAD 365
Query: 297 FLLGCP 302
+L
Sbjct: 366 YLNARR 371
>gi|320530182|ref|ZP_08031252.1| methionyl-tRNA formyltransferase [Selenomonas artemidis F0399]
gi|320137615|gb|EFW29527.1| methionyl-tRNA formyltransferase [Selenomonas artemidis F0399]
Length = 313
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 98/314 (31%), Positives = 137/314 (43%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH--SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+RVVFMGT +FAV AL + +V+V TQP RP G RG K + S V A E +
Sbjct: 1 MRVVFMGTPDFAVPIAAALAARPDLTEVVAVVTQPDRPRG-RGKKVLASPVKAWALENRI 59
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P + E+ + + DVAVV A+G ++ Q +L+ G N HASLLPRWRGA
Sbjct: 60 PVLQPVRARDAAFIEEMRALHPDVAVVAAFGQILSQELLDVPTHGCINVHASLLPRWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ A+MAGD +GI M+MD LDTG + R VPI+ + L L + A +V
Sbjct: 120 APIQHAVMAGDAVSGITTMQMDAGLDTGDMLLCRAVPITPDTTYGTLHDALMEMGAALIV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E M++L L +PQ S P +
Sbjct: 180 ETMEQLAAGRLVRTPQTGESCY---APRITRETAQIDWSRPARELDALVRGLNPVPYAVT 236
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+I L PG ++ +A V + +Q G ++++
Sbjct: 237 SHAGAVYKIGRLHGTGRPASAVPGTIVSADPKGGLIVAAGDEDVAVTEMQAPGKKMMEAA 296
Query: 296 DFLLGCPVIIGCIV 309
+L G I
Sbjct: 297 AYLRGHRFEINTRF 310
>gi|53724950|ref|YP_101983.1| methionyl-tRNA formyltransferase [Burkholderia mallei ATCC 23344]
gi|254182252|ref|ZP_04888849.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1655]
gi|254203664|ref|ZP_04910024.1| methionyl-tRNA formyltransferase [Burkholderia mallei FMH]
gi|254360306|ref|ZP_04976576.1| methionyl-tRNA formyltransferase [Burkholderia mallei 2002721280]
gi|73919383|sp|Q62MT4|FMT_BURMA RecName: Full=Methionyl-tRNA formyltransferase
gi|52428373|gb|AAU48966.1| methionyl-tRNA formyltransferase [Burkholderia mallei ATCC 23344]
gi|147745176|gb|EDK52256.1| methionyl-tRNA formyltransferase [Burkholderia mallei FMH]
gi|148029546|gb|EDK87451.1| methionyl-tRNA formyltransferase [Burkholderia mallei 2002721280]
gi|184212790|gb|EDU09833.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1655]
Length = 327
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 117/321 (36%), Positives = 170/321 (52%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYAFERGMA 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAVAALDLLHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + +V I+ + TA L +L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAA 182
Query: 173 LCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A + ++ L +PQ +G+TYAEKI K E +++ + A + +RA P
Sbjct: 183 AGARLIVDALVELERTGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ ++ + PG +++ IAC +GA+R+ +LQ+ G
Sbjct: 243 FPGGAGTL--DGATLKLWAADAVPGRDDAAPGTIVDIGPDGVVIACGEGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ +G
Sbjct: 301 GKRLPAREFLAGAPLAVGQRF 321
>gi|15605259|ref|NP_220045.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis D/UW-3/CX]
gi|255311348|ref|ZP_05353918.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis 6276]
gi|255317649|ref|ZP_05358895.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis 6276s]
gi|6685430|sp|O84535|FMT_CHLTR RecName: Full=Methionyl-tRNA formyltransferase
gi|3328968|gb|AAC68132.1| Methionyl tRNA Formyltransferase [Chlamydia trachomatis D/UW-3/CX]
gi|296436063|gb|ADH18237.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis G/9768]
gi|296436991|gb|ADH19161.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis G/11222]
gi|296437924|gb|ADH20085.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis G/11074]
gi|297140424|gb|ADH97182.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis G/9301]
gi|297748660|gb|ADI51206.1| Methionyl-tRNA formyltransferase [Chlamydia trachomatis D-EC]
gi|297749540|gb|ADI52218.1| Methionyl-tRNA formyltransferase [Chlamydia trachomatis D-LC]
Length = 316
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 107/308 (34%), Positives = 168/308 (54%), Gaps = 9/308 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+LRVV++GT +FA L+ L+ + IV V T+ +P +R K + S V + A ++
Sbjct: 1 MSLRVVYLGTPQFAATVLKTLLDAHTHIVGVVTRADKPQ-KRSSKLISSPVKQLALSKNI 59
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P K + Q + ADV +VVAYG+++ Q +L+ G YN HA LLP +RGA
Sbjct: 60 PLLQPIKTTDPAFLAQLREWQADVFIVVAYGVILKQELLDIPTYGCYNLHAGLLPAYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQR IM G +G +++MD +DTG +A + V I ++ GL + L+ ++
Sbjct: 120 APIQRCIMDGGVLSGNTVIRMDAGMDTGDIANVNYVAIGEDMTAGGLAEALAASGGELLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++E + PQ E T A K++K E +++ A V+ HIR +SP PGAW
Sbjct: 180 KTLQEIEAGTVRHVPQNEAMATLAPKLTKEEGGIHWDAPASQVYAHIRGVSPAPGAWTRY 239
Query: 240 MIGNKH-ERIKLLESQLVEGEGK---PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+ K R+ +L +++ G PGEV+ + IAC QGA+R+ +Q G ++
Sbjct: 240 LSQGKEARRLGVLSARMESFSGNYGDPGEVLGVSGEDLLIACRQGALRLRMVQPEGKALM 299
Query: 293 DIGDFLLG 300
DF G
Sbjct: 300 KAKDFFNG 307
>gi|184159972|ref|YP_001848311.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii ACICU]
gi|332873407|ref|ZP_08441361.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii 6014059]
gi|229487444|sp|B2I2H7|FMT_ACIBC RecName: Full=Methionyl-tRNA formyltransferase
gi|183211566|gb|ACC58964.1| Methionyl-tRNA formyltransferase [Acinetobacter baumannii ACICU]
gi|322509889|gb|ADX05343.1| Methionyl-tRNA formyltransferase [Acinetobacter baumannii 1656-2]
gi|332738470|gb|EGJ69343.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii 6014059]
Length = 320
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 113/320 (35%), Positives = 169/320 (52%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL+ +SH I++VYTQP R AG RG K S V + A E ++P
Sbjct: 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAG-RGQKLTPSPVKQLALEHNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + DV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 YQPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD+ETGI IM+M LDTG + + PI+S +A L +L+ A
Sbjct: 120 RGAAPIQRAIATGDDETGITIMQMAAGLDTGDMMYKTYCPITSEDTSATLHDKLAAQGAT 179
Query: 177 AMV---EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ E+ + L++ Q E+ YA K+ K E R+++ +A V +IRA +P+P
Sbjct: 180 AICAVLESEETLQKYLAEREVQDESLTVYAHKLVKSEARIDWSMNAVQVDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGG 289
A++++ N S + + + GE+I +AC + + + +Q GG
Sbjct: 240 VAFIQLDENNALRVWNSTISNQNKADAQAGEIIAIDKQGVHVACGENTFICLTSVQWPGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ L+ + +G I+
Sbjct: 300 KALNAQQIAQTQKLHVGQIL 319
>gi|121598225|ref|YP_994100.1| methionyl-tRNA formyltransferase [Burkholderia mallei SAVP1]
gi|124384986|ref|YP_001028238.1| methionyl-tRNA formyltransferase [Burkholderia mallei NCTC 10229]
gi|126448980|ref|YP_001081880.1| methionyl-tRNA formyltransferase [Burkholderia mallei NCTC 10247]
gi|167003293|ref|ZP_02269082.1| methionyl-tRNA formyltransferase [Burkholderia mallei PRL-20]
gi|238561915|ref|ZP_00441210.2| methionyl-tRNA formyltransferase [Burkholderia mallei GB8 horse 4]
gi|254176953|ref|ZP_04883610.1| methionyl-tRNA formyltransferase [Burkholderia mallei ATCC 10399]
gi|254208640|ref|ZP_04914988.1| methionyl-tRNA formyltransferase [Burkholderia mallei JHU]
gi|121227035|gb|ABM49553.1| methionyl-tRNA formyltransferase [Burkholderia mallei SAVP1]
gi|124293006|gb|ABN02275.1| methionyl-tRNA formyltransferase [Burkholderia mallei NCTC 10229]
gi|126241850|gb|ABO04943.1| methionyl-tRNA formyltransferase [Burkholderia mallei NCTC 10247]
gi|147750516|gb|EDK57585.1| methionyl-tRNA formyltransferase [Burkholderia mallei JHU]
gi|160697994|gb|EDP87964.1| methionyl-tRNA formyltransferase [Burkholderia mallei ATCC 10399]
gi|238523610|gb|EEP87047.1| methionyl-tRNA formyltransferase [Burkholderia mallei GB8 horse 4]
gi|243061149|gb|EES43335.1| methionyl-tRNA formyltransferase [Burkholderia mallei PRL-20]
Length = 337
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 117/321 (36%), Positives = 170/321 (52%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 14 SLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYAFERGMA 72
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L + G N HASL
Sbjct: 73 VAQPPSLRRAGKYPAEAVAALDLLHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASL 132
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + +V I+ + TA L +L+
Sbjct: 133 LPRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAA 192
Query: 173 LCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A + ++ L +PQ +G+TYAEKI K E +++ + A + +RA P
Sbjct: 193 AGARLIVDALVELERTGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDP 252
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ ++ + PG +++ IAC +GA+R+ +LQ+ G
Sbjct: 253 FPGGAGTL--DGATLKLWAADAVPGRDDAAPGTIVDIGPDGVVIACGEGALRVTQLQKPG 310
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ +G
Sbjct: 311 GKRLPAREFLAGAPLAVGQRF 331
>gi|33599237|ref|NP_886797.1| methionyl-tRNA formyltransferase [Bordetella bronchiseptica RB50]
gi|39931251|sp|Q7WQS8|FMT_BORBR RecName: Full=Methionyl-tRNA formyltransferase
gi|33575283|emb|CAE30746.1| methionyl-tRNA formyltransferase [Bordetella bronchiseptica RB50]
Length = 312
Score = 156 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 120/312 (38%), Positives = 166/312 (53%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L AL+++ H + V TQP RPAG RGLK S V + A +
Sbjct: 1 MRLVFAGTPEFARIALDALLAAGHDVPLVLTQPDRPAG-RGLKLTPSPVKQAALAAGIEV 59
Query: 63 LVPTKLGQEEYEQFLS---------FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P L + + DV VV AYGL++PQ L+ +LG N HASLL
Sbjct: 60 AQPRSLRLDGRYPDEAAAARAQLERVAPDVMVVAAYGLILPQWTLDLPRLGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPIQRAI AGD ETG+ IM+MD LDTG + R VPI + A L EL++
Sbjct: 120 PRWRGAAPIQRAIEAGDAETGVTIMQMDAGLDTGDMLLERAVPIGAQQTAAQLHDELALA 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+V+A+ L Q L Q + G+TYA K+ K E ++ A + +RA +P P
Sbjct: 180 GGQAIVDALAALGQGGLAPRRQPDAGVTYAAKLDKAEAALDCSLPAAVLARRVRAFNPVP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGR 290
GA + + + ++ ++ G PG V+ IA QG +R++ LQ+AGG+
Sbjct: 240 GATIRLPGLDDPVKVWRAQALEQAAGGPPGAVLRADAQGIDIATGQGVLRLLELQKAGGK 299
Query: 291 VLDIGDFLLGCP 302
+ F+ G
Sbjct: 300 RQPVDVFVRGWQ 311
>gi|260557782|ref|ZP_05829995.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii ATCC
19606]
gi|260408573|gb|EEX01878.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii ATCC
19606]
Length = 320
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 113/320 (35%), Positives = 169/320 (52%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL+ +SH I++VYTQP R AG RG K S V + A E ++P
Sbjct: 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAG-RGQKLTPSPVKQLALEHNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + DV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 YQPLHFKASTEEGLAAQQELADLGADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD+ETGI IM+M LDTG + + PI+S +A L +L+ A
Sbjct: 120 RGAAPIQRAIATGDDETGITIMQMAAGLDTGDMMYKTYCPITSEDTSATLHDKLAAQGAT 179
Query: 177 AMV---EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ E+ + L++ Q E+ YA K+ K E R+++ +A V +IRA +P+P
Sbjct: 180 AICAVLESEETLQKYLAEREVQDESLTVYAHKLVKSEARIDWSMNAVQVDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGG 289
A++++ N S + + + GE+I +AC + + + +Q GG
Sbjct: 240 VAFIQLDENNALRVWNSTISNQNKADAQAGEIIAIDKQGVHVACGENTFICLTSVQWPGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ L+ + +G I+
Sbjct: 300 KALNAQQIAQTQKLHVGQIL 319
>gi|310287173|ref|YP_003938431.1| fmt Methionyl-tRNA formyltransferase [Bifidobacterium bifidum S17]
gi|311064035|ref|YP_003970760.1| methionyl-tRNA formyltransferase [Bifidobacterium bifidum PRL2010]
gi|309251109|gb|ADO52857.1| fmt Methionyl-tRNA formyltransferase [Bifidobacterium bifidum S17]
gi|310866354|gb|ADP35723.1| Fmt Methionyl-tRNA formyltransferase [Bifidobacterium bifidum
PRL2010]
Length = 324
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 92/319 (28%), Positives = 146/319 (45%), Gaps = 17/319 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVS--SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
L+++F GT + AV +L+AL + +V+V T+P P G RG K S V A E L
Sbjct: 2 LKILFAGTPDVAVPSLRALAADSEHFEVVAVLTRPDAPTG-RGRKLTPSPVKTAALELGL 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L ++ A A V+AYG ++ Q +L+A G+YN H SLLP WRGAA
Sbjct: 61 PVLESDPAEPTFLDELKVTGAQAAAVIAYGRILKQSVLDALPCGWYNLHFSLLPHWRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRAI +GD+ TG ++ ++ + +D GP+ + PI + L L A + +
Sbjct: 121 PVQRAIWSGDDMTGTSVFRITRAMDAGPLLVQSETPIGEHETAGDLLTRLGESGALVLRD 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ +E Q E AEKI + ++F E V IRA +P PGAW E+
Sbjct: 181 ALRTVEDGTADPVEQAEGDYPVAEKIRVNDAHIDFSAPVEAVDRQIRACTPNPGAWTELD 240
Query: 241 IGNKHE-----RIKLLESQLVEGEGK--PGEVI-------NPNFTIACSQGAVRIMRLQR 286
+ +L + + PG ++ N I + ++ ++
Sbjct: 241 ADGLGLDDGLSTLHVLRAHPADMTNPNVPGSLVSGALAAGKKNVWIGTGSTPLELLEVKA 300
Query: 287 AGGRVLDIGDFLLGCPVII 305
G + + D+ G +
Sbjct: 301 QGKKAMRAADWARGARLSE 319
>gi|76808755|ref|YP_331762.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1710b]
gi|167736560|ref|ZP_02409334.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 14]
gi|167822178|ref|ZP_02453649.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 9]
gi|167892271|ref|ZP_02479673.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 7894]
gi|167917030|ref|ZP_02504121.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei BCC215]
gi|226194611|ref|ZP_03790206.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei
Pakistan 9]
gi|237810339|ref|YP_002894790.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei
MSHR346]
gi|254188217|ref|ZP_04894729.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei Pasteur
52237]
gi|254197165|ref|ZP_04903588.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei S13]
gi|254258343|ref|ZP_04949397.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1710a]
gi|123600692|sp|Q3JXE1|FMT_BURP1 RecName: Full=Methionyl-tRNA formyltransferase
gi|76578208|gb|ABA47683.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1710b]
gi|157935897|gb|EDO91567.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei Pasteur
52237]
gi|169653907|gb|EDS86600.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei S13]
gi|225933312|gb|EEH29304.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei
Pakistan 9]
gi|237506862|gb|ACQ99180.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei
MSHR346]
gi|254217032|gb|EET06416.1| methionyl-tRNA formyltransferase [Burkholderia pseudomallei 1710a]
Length = 327
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 117/321 (36%), Positives = 170/321 (52%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYAFERGMA 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAVAALDLLHATPHDVMVVAAYGLLLPQEVLELPRHGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + +V I+ + TA L +L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMLHEARVAIAPDDTTATLHDKLAA 182
Query: 173 LCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A + ++ L +PQ +G+TYAEKI K E +++ + A + +RA P
Sbjct: 183 AGARLVVDALVELERTGALAATPQPADGVTYAEKIGKHEAALDWRKPAAALARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ ++ + PG +++ IAC +GA+R+ +LQ+ G
Sbjct: 243 FPGGAGTL--DGATLKLWAADAVPGRDDAAPGTIVDIGPDGVVIACGEGALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ +G
Sbjct: 301 GKRLPAREFLAGAPLAVGQRF 321
>gi|224282713|ref|ZP_03646035.1| methionyl-tRNA formyltransferase [Bifidobacterium bifidum NCIMB
41171]
gi|313139872|ref|ZP_07802065.1| methionyl-tRNA formyltransferase [Bifidobacterium bifidum NCIMB
41171]
gi|313132382|gb|EFR49999.1| methionyl-tRNA formyltransferase [Bifidobacterium bifidum NCIMB
41171]
Length = 324
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 92/319 (28%), Positives = 148/319 (46%), Gaps = 17/319 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVS--SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
L+++F GT + AV +L+AL + +V+V T+P P G RG K S V A E L
Sbjct: 2 LKILFAGTPDVAVPSLRALAADSEHFEVVAVLTRPDAPTG-RGRKLTPSPVKTAALELGL 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L ++ A A V+AYG ++ Q +L+A G+YN H SLLP WRGAA
Sbjct: 61 PVLESDPAEPTFLDELKVTGAQAAAVIAYGRILKQSVLDALPCGWYNLHFSLLPHWRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRAI +GD+ TG ++ ++ + +D GP+ + PI + L L A + +
Sbjct: 121 PVQRAIWSGDDMTGTSVFRITRAMDAGPLLVQSETPIGEHETAGDLLTRLGESGALVLRD 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ +E Q E AEKI + ++F E V IRA +P PGAW E+
Sbjct: 181 ALRTVEDGTADPVEQAEGDYPVAEKIRVNDAHIDFSAPVEAVDRQIRACTPNPGAWTELD 240
Query: 241 -----IGNKHERIKLLESQLVEGEGK--PGEVI-------NPNFTIACSQGAVRIMRLQR 286
+ + + +L + + PG ++ N I + ++ ++
Sbjct: 241 AGGLGLDDGLSTLHVLRAHPADMTNPNVPGSLVSGALAAGKKNVWIGTGSTPLELLEVKA 300
Query: 287 AGGRVLDIGDFLLGCPVII 305
G + + D+ G +
Sbjct: 301 QGKKAMRAADWARGARLSE 319
>gi|289551004|ref|YP_003471908.1| Methionyl-tRNA formyltransferase [Staphylococcus lugdunensis
HKU09-01]
gi|289180536|gb|ADC87781.1| Methionyl-tRNA formyltransferase [Staphylococcus lugdunensis
HKU09-01]
Length = 310
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 169/308 (54%), Gaps = 13/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ +V+FMGT +F+ L+ L+ H ++++ TQP RP G R V K A E +
Sbjct: 1 MS-KVIFMGTPDFSTTILEMLIK-EHEVIAIVTQPDRPVG-RKRVLTPPPVKKLALEHDI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K G EE E L ++D+ V A+G ++P+ +L K G N HASLLP++RG
Sbjct: 58 AVYQPEKLKGSEELEALLQLDSDLIVTAAFGQLLPEVLLEKPKYGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I+ + N + +LS+L A +
Sbjct: 118 APIHQAIIDGETETGITIMYMVKKLDAGNIIAQQAIGITEDDNVGTMHDKLSILGADLLQ 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + + PQ ++ T+A IS+ + RV++ R+A+ +HNHIR L+P+P A+ M
Sbjct: 178 KTLPDILEGKNQSIPQDDSKATFASNISRADERVDWQRNAQEIHNHIRGLAPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE-GKPGEVI---NPNFTIAC-SQGAVRIMRLQRAGGRVLDI 294
N K+ + +++ + G+PG +I + S A+ I +Q AG + + +
Sbjct: 238 DDKNM----KIFAAHIIKNKAGEPGTIIATTKQAIIVGTQSDDAIAITDMQLAGKKRMPV 293
Query: 295 GDFLLGCP 302
++L G
Sbjct: 294 SNYLSGVQ 301
>gi|225021363|ref|ZP_03710555.1| hypothetical protein CORMATOL_01382 [Corynebacterium matruchotii
ATCC 33806]
gi|224945745|gb|EEG26954.1| hypothetical protein CORMATOL_01382 [Corynebacterium matruchotii
ATCC 33806]
Length = 306
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 98/312 (31%), Positives = 149/312 (47%), Gaps = 12/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E A L +L++S+H +++V T+P G RG S V + A +P
Sbjct: 1 MRIIFAGTPEPAACALTSLLASNHDVIAVITRPDARKG-RGRTYYPSPVKELATSHDIPV 59
Query: 63 LVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L PT + E + D VVAYG +IPQ +L+ GF N H SLLPRWRGAA
Sbjct: 60 LTPTSLRDNDEFRSELRQLKPDCVPVVAYGNLIPQDVLDLVPYGFINLHFSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG ++D LDTG + PI L + L+ A +
Sbjct: 120 PVQVAIHAGDAVTGATTFRIDPGLDTGDIIGQLTEPIDPADTADSLLERLAHRGADLLTH 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD + PQ T+A KI+ + RV++ + A+++ IRA++ PGAW +
Sbjct: 180 TMDMIADGTAEYRPQDG-VATHAHKITVADARVDWTQPADSIDRAIRAVTSSPGAWSTIG 238
Query: 241 IGNKHERIKLLES-QLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+RIKL + +PG++ + V + R+Q +G + + D+
Sbjct: 239 E----QRIKLGPVTHTTDPHMQPGDIHVAKNRILVGTGTTPVSLGRVQPSGKKPMPAADW 294
Query: 298 LLGCPVIIGCIV 309
G + G
Sbjct: 295 ARGTMIE-GKRF 305
>gi|171319441|ref|ZP_02908546.1| methionyl-tRNA formyltransferase [Burkholderia ambifaria MEX-5]
gi|171095333|gb|EDT40314.1| methionyl-tRNA formyltransferase [Burkholderia ambifaria MEX-5]
Length = 327
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 123/321 (38%), Positives = 176/321 (54%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +P
Sbjct: 4 TLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYAVEHGMP 62
Query: 62 ALVPTKLGQEEYEQFLS---------FNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAADAIELLRTTPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + +V I+ + TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIDEARVAIAPDDTTATLHDRLAA 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V+A+ +LE++ P +PQ +G+TYAEKI K E +++ + A+ + +RA P
Sbjct: 183 DGARLIVDALVRLERDGALPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ E G+ PG +++ +AC A+R+ +LQ+ G
Sbjct: 243 FPGGVATL--DGAAIKLWAAEPVAARGDAAPGTIVDAAPEGVIVACGSDALRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ G
Sbjct: 301 GKRLPAREFLAGSPLAAGQRF 321
>gi|187930740|ref|YP_001901227.1| methionyl-tRNA formyltransferase [Ralstonia pickettii 12J]
gi|238689528|sp|B2U795|FMT_RALPJ RecName: Full=Methionyl-tRNA formyltransferase
gi|187727630|gb|ACD28795.1| methionyl-tRNA formyltransferase [Ralstonia pickettii 12J]
Length = 327
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 126/325 (38%), Positives = 172/325 (52%), Gaps = 22/325 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL- 60
TLRV F GT EFA L A+ + +V+V +QP RPAG RG++ S V + A
Sbjct: 4 TLRVAFAGTPEFAQIALAAIHQAGFPVVAVLSQPDRPAG-RGMQLQASPVTQYAVTHGFA 62
Query: 61 PALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
P L P L + + DV VV AYGL++PQ +L+ + G N HAS
Sbjct: 63 PILQPPSLRRTGKYPQEAAEAIDALTAQRPDVMVVAAYGLILPQEVLDLPRFGCINIHAS 122
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLPRWRGAAPI RAI AGD E+GI +M+MD LDTG + M +VPI T L L+
Sbjct: 123 LLPRWRGAAPIHRAIEAGDAESGITLMQMDAGLDTGDMIAMERVPIGLTDTTGTLHDTLA 182
Query: 172 VLCAHAMVEA-MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
L +VEA + L +PQ GITYAEKI+K E +++ R A + + A +
Sbjct: 183 ALGGRMVVEALAKLAQDGKLHATPQPAEGITYAEKIAKDEAALDWSRHAAALLRQVHAFN 242
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLV---EGEGKPGEVI---NPNFTIACSQGAVRIMRL 284
PFPGA + IK +++++ E +PG V+ TIAC GA+R+ +L
Sbjct: 243 PFPGASAAL----DGVAIKFWQAEVLADRPAEAEPGVVLAANAEGVTIACGAGALRVTQL 298
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
Q+ GG+ L +FL G + G
Sbjct: 299 QKPGGKRLPAREFLQGLAIQPGQRF 323
>gi|333028378|ref|ZP_08456442.1| putative methionyl-tRNA formyltransferase [Streptomyces sp. Tu6071]
gi|332748230|gb|EGJ78671.1| putative methionyl-tRNA formyltransferase [Streptomyces sp. Tu6071]
Length = 307
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 89/308 (28%), Positives = 142/308 (46%), Gaps = 7/308 (2%)
Query: 7 FMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA-LV 64
F GT E AV L AL++S H +V+V T+P PAG RG + V S V ++A+E +
Sbjct: 2 FAGTPEVAVPALDALIASERHEVVAVVTRPDAPAG-RGRRLVASPVAQRAEEAGIEILRP 60
Query: 65 PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
+ ++ D VVAYG ++P+ L+ G+ N H SLLP WRGAAP+Q
Sbjct: 61 ARPREESFLDRLREIAPDCCPVVAYGALLPRVALDVPAHGWVNLHFSLLPAWRGAAPVQH 120
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
A++AGD TG + +++ LD+GPV + + L L+ + + MD
Sbjct: 121 AVLAGDEITGASTFLIEEGLDSGPVYGTVTETVRPTDTSGDLLTRLAFAGSGLLAATMDG 180
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
+E +L PQ G++ A K++ + RV++ A V +R +P PG W
Sbjct: 181 IEDGSLKPVPQPAEGVSLAPKLTVEDARVDWTAPALRVDRVVRGCTPAPGPWTLFRGERL 240
Query: 245 HERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
L ++ PGE+ + V + +Q G + + D+ G
Sbjct: 241 KLVSLALAPEV--PHLAPGEIRAGKNSVHAGTGSHPVELGWIQPQGKKPMRAADWARGVR 298
Query: 303 VIIGCIVG 310
+ G +G
Sbjct: 299 LAPGETLG 306
>gi|325913843|ref|ZP_08176202.1| methionyl-tRNA formyltransferase [Xanthomonas vesicatoria ATCC
35937]
gi|325539918|gb|EGD11555.1| methionyl-tRNA formyltransferase [Xanthomonas vesicatoria ATCC
35937]
Length = 307
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 164/305 (53%), Gaps = 9/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT +FAVA+L+A + H +V+VYTQP RPAG RG S V +A +P
Sbjct: 1 MRIVFAGTPDFAVASLRA-AAQRHEVVAVYTQPDRPAG-RGRGLTPSPVKLEAIARGIPV 58
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E L D+ VVVAYGL++P+ +L A G +N HASLLPRWRGAAP
Sbjct: 59 YQPQTLRSPEALATLRGLNADLMVVVAYGLILPKAVLAAPTYGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETG+ +M+M+ LDTGPV +++ I L L+ L A + +
Sbjct: 119 IQRAIEAGDAETGVCLMQMEAGLDTGPVLLSQRIEIGEQETGGQLHDRLAALGAQVLSDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ G+TYA K+ K + R+++ + A+ + +RA +P+P A +
Sbjct: 179 LGLLRAGIRPVAQPQPAEGVTYAHKLDKAQARLDWAQPAQELARRVRAFNPWPVAEATLA 238
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R+ + + + G ++ IAC QGA+R+ LQR GG+ + D+
Sbjct: 239 --GERVRLHGAVALDLAHQQPAGTLLAASKQGIDIACGQGALRVRVLQREGGKAITAADY 296
Query: 298 LLGCP 302
L
Sbjct: 297 LNARR 301
>gi|119357656|ref|YP_912300.1| methionyl-tRNA formyltransferase [Chlorobium phaeobacteroides DSM
266]
gi|166988363|sp|A1BHJ9|FMT_CHLPD RecName: Full=Methionyl-tRNA formyltransferase
gi|119355005|gb|ABL65876.1| methionyl-tRNA formyltransferase [Chlorobium phaeobacteroides DSM
266]
Length = 315
Score = 155 bits (392), Expect = 7e-36, Method: Composition-based stats.
Identities = 84/312 (26%), Positives = 150/312 (48%), Gaps = 5/312 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVS--SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+R+VFMGT EFAV +L+++ + + +V V T +P R S S V A E
Sbjct: 1 MRIVFMGTPEFAVPSLRSIAAEHNHFELVLVVTGSDKPRRGRNAPSEPSPVKSAALELGF 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ ++ ++ +A +VVA ++P + KLG +N HASLLP +RGAA
Sbjct: 61 QVYETDDVSSSDFLSVVADSAPDVIVVAAFRILPPEVYGQAKLGAFNLHASLLPAYRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ E+G+ + K +DTG V K+P+ + N + L +LS L A +V+
Sbjct: 121 PINWAIINGEKESGVTTFFLQKTVDTGNVIMQEKIPVLPDDNASILSVKLSHLGAELVVK 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ + + Q + + A K+++ TR+ + + + + IR L+ P AW +
Sbjct: 181 TLRSIQAGTVEVQAQDDAFFSRAPKLTRENTRIRWNQPVAVLSDFIRGLAMKPAAWTTVQ 240
Query: 241 IGNKHE-RIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
R ++ +PG ++ F + S G + + +LQ G + ++ +F
Sbjct: 241 NRTMKIFRAIPFTEEITSSIEQPGSILVERGRFLVRGSDGWLEVKQLQPEGRKPMEGAEF 300
Query: 298 LLGCPVIIGCIV 309
G G +
Sbjct: 301 ARGFRPESGTSL 312
>gi|104161992|emb|CAJ75701.1| methionyl-tRNA formyltransferase [uncultured Thermotogales
bacterium]
Length = 310
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 102/312 (32%), Positives = 165/312 (52%), Gaps = 7/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT EFA A L+ +V S + + V++QP RP G RG K + V A + +P
Sbjct: 1 MKIVFMGTPEFAAAHLKEIVESGNKVAGVFSQPDRPKG-RGQKVEPTPVKTVATNYGIPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ +E + LS + D+ VVVA+G ++ ++N +G +N HASLLP++RGAAP
Sbjct: 60 FQPEKINSDEGFEKLSELSPDIIVVVAFGKLLKSGVINLPTIGCFNVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI G+ +TGI I K+D+ +DTG +A R++ I + + L +L+ L +V
Sbjct: 120 IQRAIENGETKTGITIFKIDEGMDTGAIALKRELEIHPSDSFGSLYLKLAELGKKTLVHF 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++++++ L L+PQ + + + A V N IRA P PGA + +
Sbjct: 180 LERVKEGRLELAPQDGIPSFAPKIQPEDLVISDLSD-AAKVVNKIRAYDPQPGARVSVEG 238
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
L+ + EG+G GE++ ++C V I +Q G + + D L
Sbjct: 239 RISKVFGASLKCR-NEGKGIVGEIVKIDDRGMIVSCGAENVIISLVQFPGKKPMRPKDAL 297
Query: 299 LGCPVIIGCIVG 310
G + G I+G
Sbjct: 298 SGRLISEGIILG 309
>gi|325924334|ref|ZP_08185878.1| methionyl-tRNA formyltransferase [Xanthomonas gardneri ATCC 19865]
gi|325545199|gb|EGD16509.1| methionyl-tRNA formyltransferase [Xanthomonas gardneri ATCC 19865]
Length = 307
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 166/305 (54%), Gaps = 9/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT +FAVA+L+A + H +V+VYTQP RPAG RG S V +A +P
Sbjct: 1 MKIIFAGTPDFAVASLRA-AAQRHEVVAVYTQPDRPAG-RGRGLTASPVKLEAIARGIPV 58
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E + +AD+ VVVAYGL++P+ +L A G +N HASLLPRWRGAAP
Sbjct: 59 FQPQTLRSPEALATLRALDADLMVVVAYGLILPKAVLAAPTYGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETG+ +M+M+ LDTGPV +++ I L L+ L A + +
Sbjct: 119 IQRAIEAGDTETGVCLMQMEAGLDTGPVLLSQRLEIGEQETGGQLHDRLAALGAQVLSDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ G+TYA K+ K + R+++ + A+ + +RA +P+P E M
Sbjct: 179 LGLLRAGVRPVAQPQPAEGVTYAHKLDKAQARLDWAQPAQELARRVRAFNPWPV--AEAM 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + R+ + + PG ++ IAC GA+R+ LQR GG+ + D+
Sbjct: 237 LAGERVRLHGAVALELAHRQAPGTLLAASKQGIDIACGAGALRVRVLQREGGKAITAADY 296
Query: 298 LLGCP 302
L
Sbjct: 297 LNARR 301
>gi|331701498|ref|YP_004398457.1| methionyl-tRNA formyltransferase [Lactobacillus buchneri NRRL
B-30929]
gi|329128841|gb|AEB73394.1| Methionyl-tRNA formyltransferase [Lactobacillus buchneri NRRL
B-30929]
Length = 314
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 103/313 (32%), Positives = 168/313 (53%), Gaps = 14/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
VVFMGT +FAV LQ L+ + I+ V TQP RP G R + S V + A LP
Sbjct: 4 VVFMGTPQFAVPILQGLLDQKYDILCVVTQPDRPVG-RKHRISQSPVKQAAVANHLPVFQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G E ++ + F+ D+ V AYG +P ++LNA K+ N H SLLP++RG AP+Q
Sbjct: 63 PEKLSGSPEMQRVIDFHPDLIVTAAYGQFLPTKMLNAVKIAAVNVHGSLLPKYRGGAPVQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
AIM GD+ETGI+++ M K +D G + + VPI + +T + +LS++ ++ +
Sbjct: 123 YAIMNGDSETGISLIYMVKKMDAGDILAQKAVPIQPDDDTETMFDKLSIVGRDLLLATLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ ++ PQ ++ + ++ I E +++F ++A V+ +RAL P P A+ +
Sbjct: 183 KVITGDISPVPQDQDQVVFSPNIKPEEEQLDFNQTAFMVNAKVRALRPDPVAYTVI---- 238
Query: 244 KHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDF 297
+R K+ +Q+V+ + PG V+ ++ +G + I LQ AG I D+
Sbjct: 239 NGKRTKIWRAQVVDQTTEMAPGSVVEKTKHQLLLSAGKGTVLSIQELQPAGKPKQQITDY 298
Query: 298 LL--GCPVIIGCI 308
L G + +G
Sbjct: 299 LNGIGQSLKVGQQ 311
>gi|212716900|ref|ZP_03325028.1| hypothetical protein BIFCAT_01844 [Bifidobacterium catenulatum DSM
16992]
gi|212660185|gb|EEB20760.1| hypothetical protein BIFCAT_01844 [Bifidobacterium catenulatum DSM
16992]
Length = 320
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 86/314 (27%), Positives = 150/314 (47%), Gaps = 14/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVS--SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
L+V+F GT + AV +L+ L +V+V T+P P G RG K V + V + A E L
Sbjct: 2 LKVLFAGTPDVAVPSLELLAEDTEHFEVVAVLTRPDAPTG-RGRKLVPNPVKQAALELGL 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + + + A A VVAYG ++ Q +L+A +G+YN H SLLP+WRGAA
Sbjct: 61 PVIESDPSEETFISELAATGAQAAAVVAYGKILKQDVLDALPMGWYNLHFSLLPQWRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QR+I AG+ TG + ++ + +D GP+ V I + L L+ + +
Sbjct: 121 PVQRSIWAGEKVTGATVFRIVRAMDAGPILAQSTVEIGVHETAGELLNRLAEDGSRLLAA 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ + + + Q A+KI+ + + F V IRA +P PGAW E+
Sbjct: 181 SLQAMADDQIIPVEQPAGAYEIAQKITVEDAHIRFDIPVFAVDRQIRACTPNPGAWCELH 240
Query: 241 IGNKHERI--KLLESQLVE-------GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGG 289
+ + +L +Q + +PG+++ N + S + ++ ++ G
Sbjct: 241 ANAEAKPTTLHVLRAQSADISNPNTPASLEPGQIVAGKKNVWVGTSSDPLELLEVKAQGK 300
Query: 290 RVLDIGDFLLGCPV 303
+ + D+ G +
Sbjct: 301 KAMRAADWARGAHL 314
>gi|332184031|gb|AEE26285.1| Methionyl-tRNA formyltransferase [Francisella cf. novicida 3523]
Length = 313
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 110/319 (34%), Positives = 168/319 (52%), Gaps = 18/319 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT + + L+ L S H+I +V TQP R G RG K S V + A P
Sbjct: 3 KLNIIFAGTPDISAQVLKDLYKSQHNIQAVLTQPDRAKG-RGKKVQFSPVKEVALANHTP 61
Query: 62 ALVP--TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K + E+ DV VV+AYG+++PQ L+ K G N H SLLP+WRGA
Sbjct: 62 VFQPLSFKKDPQVLEKIRELKPDVIVVIAYGIIVPQEFLDIPKYGCLNIHVSLLPKWRGA 121
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD +TGI IM+MD LDTG + ++ I + L + + L ++
Sbjct: 122 APIQRAIQAGDTKTGICIMQMDAGLDTGDILNTLEIDIQDTDTSQTLHDKFAKLSIKPLL 181
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ ++K+E + PQ TYA KI+K E ++F +SA + HIRA +P+P A+ +
Sbjct: 182 QTLEKIE--IIKPQPQ-RGKPTYAHKITKQEGLIDFTKSAWQISCHIRAFTPWPVAYFIL 238
Query: 240 MIGNKHERIKLLESQLVE---GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLD 293
E +K+ + ++++ + G +I+ F IA S +R +LQ ++L+
Sbjct: 239 ----DGEAVKVGDFEILDQNVDNSQAGTIIDIDRDGFDIATSDKIIRFKQLQFPNKKMLN 294
Query: 294 IGDFLLGCPVI--IGCIVG 310
I D L G + +G +G
Sbjct: 295 IIDILNGKDLDEYVGYKLG 313
>gi|302866832|ref|YP_003835469.1| methionyl-tRNA formyltransferase [Micromonospora aurantiaca ATCC
27029]
gi|315503247|ref|YP_004082134.1| methionyl-tRNA formyltransferase [Micromonospora sp. L5]
gi|302569691|gb|ADL45893.1| methionyl-tRNA formyltransferase [Micromonospora aurantiaca ATCC
27029]
gi|315409866|gb|ADU07983.1| methionyl-tRNA formyltransferase [Micromonospora sp. L5]
Length = 308
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 98/312 (31%), Positives = 151/312 (48%), Gaps = 10/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT AV L A+ +S H +++V T+P PAG RG V S V A +
Sbjct: 1 MRLIFAGTPAVAVPALDAIAASGHELLAVVTRPDAPAG-RGRGLVRSPVGAWADAHGVEV 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + + E+ ++ D VVAYG ++P L + G+ N H SLLP WRGAAP
Sbjct: 60 LTPARPREPEFLDRLRELAPDCVPVVAYGALVPPVALEIPRHGWINLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A++ GD TG ++ ++++ LDTGPV I + L + L+ A +V
Sbjct: 120 VQHAVLHGDELTGASVFELEEGLDTGPVYGTVTDEIRPADTSGDLLERLAHSGAGLLVAV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + PQ +G++ A K++ + RV + A V IRA +P PG W
Sbjct: 180 LDAIGAGTARAVPQPADGVSLAPKLTVEDARVRWGDPAFAVDRRIRACTPAPGPWTTFRD 239
Query: 242 GNKHERIKLLESQLVEG--EGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
R+KL + E KPGE V + + VR+ ++ AG + + GD+
Sbjct: 240 D----RVKLGPVTPLPDGPELKPGELHVEKSGVLVGTATTPVRLGEVRAAGKKAMPAGDW 295
Query: 298 LLGCPVIIGCIV 309
G V G +
Sbjct: 296 ARGARVTAGEVF 307
>gi|330444111|ref|YP_004377097.1| methionyl-tRNA formyltransferase [Chlamydophila pecorum E58]
gi|328807221|gb|AEB41394.1| methionyl-tRNA formyltransferase [Chlamydophila pecorum E58]
Length = 316
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 169/308 (54%), Gaps = 8/308 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M L+VV+ GT +F+ L+ L+S I+ V T+ +P +R + + S V A +
Sbjct: 1 MDLKVVYFGTPQFSARVLEGLLSLGIRIIGVVTRADKPQ-KRSAQPIPSPVKVLASAHGI 59
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P K E+ +F+ADV VVVA+G ++ Q +L+ + G YN HA LLP +RGA
Sbjct: 60 PLLQPIKASAPEFITQLQAFHADVFVVVAFGAILCQEVLDLPRYGCYNLHAGLLPAYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQR I+ G E+G +++MD +DTG +A V I ++ L + L+V +
Sbjct: 120 APIQRCIIDGATESGNTVIRMDAGMDTGDIALRTHVHIGPDMTAGELSEALAVQGPEVLK 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++E L L+PQ T A K+SK + ++ + + A+ V+ HIR ++P PGAW
Sbjct: 180 KTLLQIEAGELILTPQDSTKATIAPKLSKEDGKILWEKPAKEVYAHIRGVTPAPGAWTLF 239
Query: 240 MIGN-KHERIKLLESQLVEGEGK---PGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLD 293
I + +R+ + ++L G PG +I N +AC +GA++++ +Q G ++D
Sbjct: 240 SINDKPKKRLGIRRARLFSESGHFGSPGTLIARNQEVLVACGEGALKLIEVQPEGKALMD 299
Query: 294 IGDFLLGC 301
FL G
Sbjct: 300 SKSFLNGY 307
>gi|317151958|ref|YP_004120006.1| methionyl-tRNA formyltransferase [Desulfovibrio aespoeensis Aspo-2]
gi|316942209|gb|ADU61260.1| methionyl-tRNA formyltransferase [Desulfovibrio aespoeensis Aspo-2]
Length = 322
Score = 155 bits (391), Expect = 9e-36, Method: Composition-based stats.
Identities = 114/308 (37%), Positives = 161/308 (52%), Gaps = 9/308 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
LR VFMGT EFA L+ L+ +V VYTQP RP G RG + S V A E L
Sbjct: 11 PLRTVFMGTPEFAAEILRILLEFEGAEVVGVYTQPDRPCG-RGRQCKPSPVKDVAVERGL 69
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P E + + DV VV AYGL++PQ +L+ L N HASLLPR RGA
Sbjct: 70 PVFQPKNFKDETDIEALRALKPDVLVVAAYGLILPQSVLDVPTLHPLNVHASLLPRHRGA 129
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRA+ AG+ TGI+IMKM+ LDTGPV R + I N + + EL+ L +
Sbjct: 130 APIQRAVEAGEVVTGISIMKMEAGLDTGPVMVQRALRIGHNDHAGTIHDELAKLGGICIC 189
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + +L+ +PQ TYA+K+ KGE +++ R A+ +HN IRA+ P+PGA+ +
Sbjct: 190 EGLARLQTGAYSFAPQDHALATYAKKLEKGEGAIDWNRPAQAIHNQIRAMYPWPGAYFDW 249
Query: 240 MIGN-KHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ K R+ + ++ E + PG V+ + IA + ++ G + +
Sbjct: 250 TGPDGKTLRLNVTPGEVSEQTAQAAPGTVLGEVDGKLAIATADKVYLTPEVKPEGRKAMA 309
Query: 294 IGDFLLGC 301
F G
Sbjct: 310 ATAFACGY 317
>gi|56416583|ref|YP_153657.1| methionyl-tRNA formyltransferase [Anaplasma marginale str. St.
Maries]
gi|254994797|ref|ZP_05276987.1| methionyl-tRNA formyltransferase [Anaplasma marginale str.
Mississippi]
gi|255002924|ref|ZP_05277888.1| methionyl-tRNA formyltransferase [Anaplasma marginale str. Puerto
Rico]
gi|255004052|ref|ZP_05278853.1| methionyl-tRNA formyltransferase [Anaplasma marginale str.
Virginia]
gi|73919371|sp|Q5PBC7|FMT_ANAMM RecName: Full=Methionyl-tRNA formyltransferase
gi|56387815|gb|AAV86402.1| methionyl-tRNA formyltransferase [Anaplasma marginale str. St.
Maries]
Length = 301
Score = 155 bits (391), Expect = 9e-36, Method: Composition-based stats.
Identities = 103/303 (33%), Positives = 159/303 (52%), Gaps = 14/303 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMG+SEF+V TL+ L+ S H +++VYT+ P+PAG RG + VH A ++P
Sbjct: 1 MKVIFMGSSEFSVPTLEFLIGSQHEVLAVYTKAPKPAG-RGHLLTKTPVHAYADAHNVPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E + + D +V +YG+++P+ +L + G N H SLLPRWRGAAP
Sbjct: 60 RSPASLSSDSERDIIEKYMPDAIIVASYGMILPRWMLEVPRFGCINVHPSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q AI++GD TG+ IM++++ LD G + PI S N L + LS + +++
Sbjct: 120 MQHAILSGDAVTGVTIMQLNERLDAGDIFLQESTPIGSRENIVALSERLSSMGGRMLLKV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D L+ Q + G TYA K E VNF +A+ + +RA P +L
Sbjct: 180 LDNLDTMRSVS--QDDAGATYAAK--PSEFCVNFNDAADYICRQVRAFYPRMFFFL---- 231
Query: 242 GNKHERIKLLESQLVEGEG-KPGEVINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLL 299
+R+KLLE+ E G + G+V+N I C G + +Q + DI FL
Sbjct: 232 --DGKRVKLLEADNYELAGAQIGDVVNDELHIQCGNGTVLAPKIVQPESKKPCDIRSFLR 289
Query: 300 GCP 302
G
Sbjct: 290 GFR 292
>gi|73666837|ref|YP_302853.1| methionyl-tRNA formyltransferase [Ehrlichia canis str. Jake]
gi|123759465|sp|Q3YSQ0|FMT_EHRCJ RecName: Full=Methionyl-tRNA formyltransferase
gi|72393978|gb|AAZ68255.1| methionyl-tRNA formyltransferase [Ehrlichia canis str. Jake]
Length = 303
Score = 155 bits (391), Expect = 9e-36, Method: Composition-based stats.
Identities = 105/307 (34%), Positives = 168/307 (54%), Gaps = 16/307 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMG+ EF+V+ L L+ + H +V+VYT+ P+PAGRRG + VH A++ ++
Sbjct: 1 MKIIFMGSPEFSVSALSYLLENESHEVVAVYTKIPKPAGRRGRILTKTPVHIIAEQNNIE 60
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E E+ LS N DV VVVAYGL+IPQ +L+ K G N H SLLPRWRGAA
Sbjct: 61 VNTPKSLKHDAEQEKILSLNPDVIVVVAYGLIIPQGVLSIPKYGCINIHPSLLPRWRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI++GD++TG+ I++M++ LD G + R +PI N L ++L+ L + ++E
Sbjct: 121 PIHYAILSGDDKTGVTIIQMNELLDEGDILLQRDIPIDEQDNIDTLSKKLAHLGSSMLIE 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D ++ L P +N + ++F +A+ + +RAL P
Sbjct: 181 VLDNID----NLVPIKQNNDDATYAHKIIDFHIDFNEAADVICRKVRALYPRAFLLFN-- 234
Query: 241 IGNKHERIKLLESQLVEGEG----KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+R+++L++ KPG VI+ + I C G + + +Q G +I D
Sbjct: 235 ----GKRLRILKTSYYSDSSVQDLKPGAVIDSHMNIKCKDGVLVPLVVQMEGKNPCNIDD 290
Query: 297 FLLGCPV 303
F+LG V
Sbjct: 291 FILGYNV 297
>gi|325859921|ref|ZP_08173048.1| methionyl-tRNA formyltransferase [Prevotella denticola CRIS 18C-A]
gi|325482447|gb|EGC85453.1| methionyl-tRNA formyltransferase [Prevotella denticola CRIS 18C-A]
Length = 337
Score = 155 bits (391), Expect = 9e-36, Method: Composition-based stats.
Identities = 91/330 (27%), Positives = 156/330 (47%), Gaps = 28/330 (8%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M +R+ FMGT EFAV TL+ALV +++V+V T P +P GR + SAV A E
Sbjct: 1 MKKENIRIAFMGTPEFAVETLKALVECGYNVVAVVTCPDKPVGRHQDRLQPSAVKLYAVE 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P K+ + + L VV ++P+ I + LG +N HA+LLP++R
Sbjct: 61 KGLPVLQPEKMKDPAFVEQLRSFKADLQVVVAFRMLPEVIWSMPPLGTFNVHAALLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV----- 172
GAAPI A++ G+ ETG+ +DK +DTG + + I + + L
Sbjct: 121 GAAPINWAVINGETETGVTTFFLDKDIDTGRIILQKPFEIPDTADVEYVYDGLMRLGAEI 180
Query: 173 ----------LCAHAMVEAMDKLEQNNLPLSPQIE--NGITYAEKISKGETRVNFCRSAE 220
+E+MD + +PQ + + A KI K + + +++
Sbjct: 181 ALETISLIASKLPEENLESMDFGHILDEISTPQTFLGSELHSAPKIFKETCEICWNQNSR 240
Query: 221 NVHNHIRALSPFPGAWLEMMIG----NKHERIKLLESQLVEGE--GKPGEVI--NPNFTI 272
N+++ +R LSP+PG+W ++ I +K +K+ + G+ G + +
Sbjct: 241 NIYDFVRGLSPYPGSWSKLHIIEGEVDKPLVLKIFKVSKTNRPCMGRCGTFVVEKTRLYV 300
Query: 273 ACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+ + ++ +Q +G + +D+ FL G
Sbjct: 301 NTADFLLELLDVQLSGKKRMDVCSFLNGFK 330
>gi|327313737|ref|YP_004329174.1| methionyl-tRNA formyltransferase [Prevotella denticola F0289]
gi|326944424|gb|AEA20309.1| methionyl-tRNA formyltransferase [Prevotella denticola F0289]
Length = 337
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 91/330 (27%), Positives = 158/330 (47%), Gaps = 28/330 (8%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M +R+ FMGT EFAV TL+ALV +++V+V T+P +P GR + SAV A E
Sbjct: 1 MKKENIRIAFMGTPEFAVETLKALVECCYNVVAVVTRPDKPVGRHQDRLQPSAVKLYAVE 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P K+ + + L VV ++P+ I + LG +N HA+LLP++R
Sbjct: 61 KGLPVLQPEKMKDPAFVEQLRSFKADLQVVVAFRMLPEVIWSMPPLGTFNVHAALLPQYR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV----- 172
GAAPI A++ G+ ETG+ +DK +DTG + + I + + L
Sbjct: 121 GAAPINWAVINGETETGVTTFFLDKDIDTGRIILQKPFEIPDTADVEYVYDGLMRLGAEI 180
Query: 173 ----------LCAHAMVEAMDKLEQNNLPLSPQIE--NGITYAEKISKGETRVNFCRSAE 220
+E+MD + + +PQ + + A KI K + + +++
Sbjct: 181 ALETISLIASKLPEENLESMDFGQILDEISTPQTFLGSELHSAPKIFKETCEICWNQNSR 240
Query: 221 NVHNHIRALSPFPGAWLEMMIG----NKHERIKLLESQLVEGE--GKPGEVI--NPNFTI 272
N+++ +R LSP+PG+W ++ I +K +K+ + G+ G + +
Sbjct: 241 NIYDFVRGLSPYPGSWSKLHIIKGEADKPLVLKIFKVSKTNRPCMGRCGTFVVEKTRLYV 300
Query: 273 ACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+ + ++ +Q +G + +D+ FL G
Sbjct: 301 NTADFLLELLDVQLSGKKRMDVCSFLNGFK 330
>gi|149280329|ref|ZP_01886450.1| methionyl-tRNA formyltransferase [Pedobacter sp. BAL39]
gi|149228878|gb|EDM34276.1| methionyl-tRNA formyltransferase [Pedobacter sp. BAL39]
Length = 297
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 89/300 (29%), Positives = 144/300 (48%), Gaps = 7/300 (2%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +FAVA+L ALV + + +V T +PAG RG K SAV + A + L P K
Sbjct: 1 MGTPDFAVASLNALVEAGFDVAAVVTAADKPAG-RGQKIQESAVKQYAVAKGIKVLQPLK 59
Query: 68 LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127
L E+ + L VV ++P+ + N G N HASLLP++RGAAPI AI+
Sbjct: 60 LKDPEFLEELKSINADLQVVVAFRMLPEAVWNMPAKGTINLHASLLPQYRGAAPINHAII 119
Query: 128 AGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQ 187
G+ E+G+ + +DTG V F KV I +N L +L A +V+ + +E
Sbjct: 120 NGEKESGVTTFFLKHEIDTGDVIFSEKVEIQNNDTAGDLHDKLMATGAGLLVKTVKAIES 179
Query: 188 NNLPLSPQIENGITYAEKISKGETR-VNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ PQ ++G E +++ + ++N IR LSP+P A+ ++ K
Sbjct: 180 GDYQEQPQPQSGELKHAPKIFKEHCLIDWNQPVAKIYNLIRGLSPYPTAYT--LLNGKTL 237
Query: 247 RIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPV 303
++ E + E G ++ + G +++ LQ G + + + +FL G +
Sbjct: 238 KVFSAEMEETEPGIAAGGFLSDGKTFLKFSTKDGFIKLTDLQYEGKKRMTVEEFLRGMRL 297
>gi|111024113|ref|YP_707085.1| methionyl-tRNA formyltransferase [Rhodococcus jostii RHA1]
gi|110823643|gb|ABG98927.1| methionyl-tRNA formyltransferase [Rhodococcus jostii RHA1]
Length = 312
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 103/306 (33%), Positives = 160/306 (52%), Gaps = 9/306 (2%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
R+VF GT E AV +L+ L+ S H +V+V T+P AG RG K V S + A +
Sbjct: 7 RIVFAGTPEPAVPSLERLIRSPRHDVVAVITRPDAVAG-RGRKVVRSPIGALADSHGIEV 65
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + + ++ L+ D A VVAYG ++PQ++L+ G+ N H SLLP WRGAAP
Sbjct: 66 LTPERPSEPDFLARLADLAPDCAPVVAYGALLPQKVLDIPAHGWVNLHFSLLPAWRGAAP 125
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q AI AGD+ TG + +++ +DTGPV + I + L L+ A +
Sbjct: 126 VQAAIGAGDDMTGASAFRLEAGMDTGPVYGVVTERIRDSDTAGDLLGRLADSGAVLLESV 185
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D +E + PQ +G+++A K+S R+ + R+A V H+R+++P PGAW +
Sbjct: 186 LDGIEDGAITAVPQSADGVSHAPKVSVEAARIRWDRTAAVVDRHVRSVTPAPGAWTMIGD 245
Query: 242 GNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
R+K+ E +PGE+ F I S AVR+ R+Q G + + D+
Sbjct: 246 ----LRVKVGPVTPTEERLEPGEISVTKAGFLIGTSTVAVRLDRIQPQGKKQMAALDWAR 301
Query: 300 GCPVII 305
G +
Sbjct: 302 GARLDA 307
>gi|81428304|ref|YP_395304.1| methionyl-tRNA formyltransferase [Lactobacillus sakei subsp. sakei
23K]
gi|123755855|sp|Q38XT6|FMT_LACSS RecName: Full=Methionyl-tRNA formyltransferase
gi|78609946|emb|CAI54993.1| Methionyl-tRNA formyltransferase [Lactobacillus sakei subsp. sakei
23K]
Length = 318
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 102/313 (32%), Positives = 165/313 (52%), Gaps = 14/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
+VFMGT +F+V L+ALV++ + I++V TQP R G R + V + A LP
Sbjct: 4 IVFMGTPQFSVPILEALVANDYQILAVVTQPDRKVG-RKQVLQQTPVKEAAVRLDLPVFQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G E ++ D+ V AYG +P ++L A K+ N H SLLP++RG APIQ
Sbjct: 63 PEKLSGSPELADVIALQPDLIVTAAYGQFLPTKLLEAAKIAAINVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
A++ GD+E GI IM M K +D G + +PI + +T L +LS + +++ +
Sbjct: 123 YAVLNGDSEIGITIMHMAKKMDAGDMIEQASIPIEATDDTGSLFDKLSYVGRDLLLKTLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ P +PQ E +T+A I+K + +++ + AE + N IRAL P PGAWL +
Sbjct: 183 GIIAQTAPRTPQDEVQVTFAYNITKEQEQLDINQPAEQLLNQIRALRPQPGAWLAV---- 238
Query: 244 KHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDF 297
+R K+ ++ + E + G V+ +F +A G ++I +Q AG + + +
Sbjct: 239 NGQRTKIWQATVAETTTDQAAGVVVALNKKDFELAAGNGTVLKITEIQPAGKAKMPVQSY 298
Query: 298 LL--GCPVIIGCI 308
L G + +G
Sbjct: 299 LNGVGKQLAVGQQ 311
>gi|319899939|ref|YP_004159667.1| methionyl-tRNA formyltransferase [Bacteroides helcogenes P 36-108]
gi|319414970|gb|ADV42081.1| methionyl-tRNA formyltransferase [Bacteroides helcogenes P 36-108]
Length = 322
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 166/319 (52%), Gaps = 16/319 (5%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M LR+V+MGT +FAV +L+ LV +++V V T P +PAG RG + S V + A +
Sbjct: 1 MKKEDLRIVYMGTPDFAVESLRCLVEGGYNVVGVITMPDKPAG-RGHRLQFSPVKQYALD 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L P KL E + + L +V ++P+ + N +LG +N HASLLP++R
Sbjct: 60 HDLPLLQPEKLKDEAFVEALRAWKADLQIVVAFRMLPEVVWNMPRLGTFNLHASLLPQYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ GD ETGI + +DTG V VPI+ + + +L +L
Sbjct: 120 GAAPINWAVINGDTETGITTFFLKHEIDTGEVIRQVHVPIADTDDVGIVHDKLMLLGGRL 179
Query: 178 MVEAMDKLEQNNLPLSPQIEN----GITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
++E ++ + ++ PQ E + A KI K R+++ + + +++ IR LSP+P
Sbjct: 180 VLETVEAILDGSVKGIPQEEMAVAGDLRPAPKIFKETCRIDWNQPVKRIYDFIRGLSPYP 239
Query: 234 GAWLEMMIGN-KHERIKLLESQLVEGEGK--PGEVI----NPNFTIACSQGAVRIMRLQR 286
AW E++ + + +K+ E++ +E + PG ++ +A + G + I LQ
Sbjct: 240 AAWTELIQPDGETVVVKVFETEKMEITHQLVPG-ILQTDEKTYIRVAATDGFIGIRTLQL 298
Query: 287 AGGRVLDIGDFLLGCPVII 305
G + L + L G +
Sbjct: 299 PGKKRLRTDELLRGFRLTE 317
>gi|297243366|ref|ZP_06927299.1| methionyl-tRNA formyltransferase [Gardnerella vaginalis AMD]
gi|296888613|gb|EFH27352.1| methionyl-tRNA formyltransferase [Gardnerella vaginalis AMD]
Length = 327
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 93/323 (28%), Positives = 155/323 (47%), Gaps = 19/323 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALVS--SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M L ++F GT E AV +L+ L + +V T+P P G RG K V S V + A E
Sbjct: 1 MALPILFAGTPEVAVPSLRELAKDSEHFDVRAVLTRPDAPTG-RGRKLVPSPVKQAALEL 59
Query: 59 SLPALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L + + + + A A VVAYG ++ Q +L+A LG+YN H SLLP+WR
Sbjct: 60 GLPVLESDPKDENVFLEQLAATGAKAAAVVAYGKILRQNVLDALPLGWYNLHFSLLPQWR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAP+QRAI AGD+ TG + ++ + +D GP+ I + N+ L L+ A
Sbjct: 120 GAAPVQRAIWAGDDITGATVFRITRGMDCGPILAQFTTKIEPHENSGDLLARLANDGAPL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ ++ +E + Q + A+KI+ + ++F A V IRA +P PGAW
Sbjct: 180 LAASLRGMETGEIVPVDQDQTPQEVAQKITVEDAHIDFHAPAFAVDRQIRACTPNPGAWC 239
Query: 238 EMMIGNKH----ERIKLLESQLVEGEGK---------PGEVI--NPNFTIACSQGAVRIM 282
E+ +++ + +L + + PG+++ + GA+ ++
Sbjct: 240 ELHADDENNAEPITLHVLRAVPADANNPHGEELMKLDPGKLLAGKKQVWVGTLSGALELL 299
Query: 283 RLQRAGGRVLDIGDFLLGCPVII 305
++ G + + D+ G +
Sbjct: 300 EVKAQGKKAMKAADWARGARLSA 322
>gi|297626328|ref|YP_003688091.1| methionyl-tRNA formyltransferase [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296922093|emb|CBL56661.1| Methionyl-tRNA formyltransferase [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 315
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 98/315 (31%), Positives = 157/315 (49%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT + AV +L+AL + H I +V T+P +G RG + V S V + A+E +
Sbjct: 1 MRIVFAGTPDLAVPSLRALSRAGHEIAAVVTRPDARSG-RGKQLVSSPVARAAEEMGIAV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYG-LVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + L+ + A V ++PQ +L+ G+ N H SLLP WRGAAP
Sbjct: 60 LKPEHPRDPGFADQLARLSPRACAVVAYGGLLPQSLLDLVPDGWINLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRA+MAGD +TG+ ++ K LD GP+ +VPI + L LSV+ A +VE
Sbjct: 120 VQRALMAGDTQTGVTTFRIVKKLDAGPLYRSVRVPIGPDETAGELLDRLSVIGADVLVET 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
L Q ++G++ A K+S + R+++ + A + N +R +P PGAW +
Sbjct: 180 FAD-ITAGLEPVEQDDDGVSIAAKVSVDDARIDWRQPAARIVNLVRGTNPAPGAWSVLSG 238
Query: 242 GNKHERIKLLESQLVEGEGK-----PGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ K+L G PGE+ N + + C GAV +++++ G + +
Sbjct: 239 RHF----KVLRVAPAGDTGAGTALLPGELRATNKHLWVGCGDGAVELIQVRDFGKKSMSG 294
Query: 295 GDFLLGCPVIIGCIV 309
D+ G G
Sbjct: 295 ADWARGARPTPGIRF 309
>gi|150026048|ref|YP_001296874.1| methionyl-tRNA formyltransferase [Flavobacterium psychrophilum
JIP02/86]
gi|259646034|sp|A6H148|FMT_FLAPJ RecName: Full=Methionyl-tRNA formyltransferase
gi|149772589|emb|CAL44072.1| Methionyl-tRNA formyltransferase [Flavobacterium psychrophilum
JIP02/86]
Length = 316
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 8/307 (2%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M LR+VFMGT EFAV L A+ + H IV V T +PAG RG K SAV + A +
Sbjct: 1 MKALRIVFMGTPEFAVGILDAIAKQNKHEIVGVITAADKPAG-RGQKIKYSAVKEYALKK 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
L L PT L E + L +V ++P+ + +LG +N HASLLP +RG
Sbjct: 60 ELTLLQPTNLKDESFLLALKSLNANLHIVVAFRMLPKVVWAMPELGTFNLHASLLPNYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPI AI+ G+ +TG+ +D +DTG + +++ IS + N L +L VL A+
Sbjct: 120 AAPINWAIINGETKTGVTTFFIDDKIDTGAMILSKELEISESENLGDLHDKLMVLGCDAV 179
Query: 179 VEAMDKLEQNNLPLSPQ-IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+E +DK+ N+ + Q + I A K+ + +++F ++ V+N IR LSP+P AW
Sbjct: 180 LETLDKIAHGNVVTTIQEDTSDIKTAYKLDRDNCKIDFTKNITEVYNLIRGLSPYPSAWC 239
Query: 238 EMMIGNKHERIKLLES--QLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLD 293
++ IK+ ++ +++ + G VI IA G ++++ LQ G + +
Sbjct: 240 NFRDADQEFSIKIYDTKQEVLLHDYTIGSVITTKKEIKIAVLGGFIQVLSLQFPGKKKMM 299
Query: 294 IGDFLLG 300
+ L G
Sbjct: 300 AHELLNG 306
>gi|307152639|ref|YP_003888023.1| methionyl-tRNA formyltransferase [Cyanothece sp. PCC 7822]
gi|306982867|gb|ADN14748.1| methionyl-tRNA formyltransferase [Cyanothece sp. PCC 7822]
Length = 334
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 98/331 (29%), Positives = 158/331 (47%), Gaps = 25/331 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+RVVF GT EFAV +L+ L+ + +++V TQP +P G RG + + S V K A + +LP
Sbjct: 1 MRVVFFGTPEFAVPSLERLLQHADLEVIAVVTQPDKPQG-RGKQLLPSPVKKLALDHNLP 59
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ + + + AD VVAYG ++ IL KL N H S+LP++RGA
Sbjct: 60 IWQPKRVKKSQATLTKLRETEADAFAVVAYGQILSPEILQMPKLACINVHGSILPQYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ ++ GD +TGI M MD+ +DTG + PI N + +L+ + A +V
Sbjct: 120 APIQWSVYHGDTQTGITTMLMDEGMDTGAMLLKAYTPIGLLDNAVEVGVKLAQIGADLLV 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE- 238
E + KL + L Q TYA I K + +++ R A +H+ IR P
Sbjct: 180 ETLLKLAKGELEPEAQNSQAATYAPPIQKTDYFIDWTRQARQIHHQIRGFYPNCLTTFRE 239
Query: 239 ----------------MMIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGA 278
+ ++++ + L G PGEV+ + +G
Sbjct: 240 QPLKILATAPLGEAYWSQLPPALQKLQAQWASLSSLAGSPGEVVSIIKKFGPVVQTGEGL 299
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ ++++Q AG R DF+ G + +G +
Sbjct: 300 LLLLQVQLAGKRPQSGQDFVNGTRLSVGEKL 330
>gi|157363556|ref|YP_001470323.1| methionyl-tRNA formyltransferase [Thermotoga lettingae TMO]
gi|166988371|sp|A8F525|FMT_THELT RecName: Full=Methionyl-tRNA formyltransferase
gi|157314160|gb|ABV33259.1| methionyl-tRNA formyltransferase [Thermotoga lettingae TMO]
Length = 302
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 89/312 (28%), Positives = 154/312 (49%), Gaps = 17/312 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F+GT +A L+AL+S+ H ++ V TQP +PAG RGL+ V S V A + +P
Sbjct: 1 MKILFLGTPLYASRHLEALLSAGHMVIGVITQPDKPAG-RGLRMVHSPVKDLALKNKIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ F D+ +VVAYG +I ++ L+ G+YN H SLLP++RGAAPI
Sbjct: 60 F-----ESLKDFPFDRLTPDIGIVVAYGGLIKKKFLDLIPFGYYNIHPSLLPKYRGAAPI 114
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
RA+ G+ TG+++ K+ + LD GP+ ++ + L+ + + + +
Sbjct: 115 NRALENGEKMTGVSLFKLTEKLDAGPIVLQVEISVDCFETFDSLENRMIEAGKKILCDFL 174
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
E + L Q + +YA KI+ + V+F + +E V N IRA PGA
Sbjct: 175 KNPE--SFELREQDHSQASYAPKITPADLFVDFRKDSEAVKNKIRAYDSRPGARTFF--- 229
Query: 243 NKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E++KL + +E G+PG ++ + + S G + I ++Q + +
Sbjct: 230 -HGEQVKLFGAVAIEKCHSGEPGTIVHIDDKGAYVTTSDGIIVISQIQFPSKKKMSFLSA 288
Query: 298 LLGCPVIIGCIV 309
L G + +
Sbjct: 289 LNGRMLRVKDRF 300
>gi|317121756|ref|YP_004101759.1| methionyl-tRNA formyltransferase [Thermaerobacter marianensis DSM
12885]
gi|315591736|gb|ADU51032.1| methionyl-tRNA formyltransferase [Thermaerobacter marianensis DSM
12885]
Length = 550
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 118/355 (33%), Positives = 162/355 (45%), Gaps = 52/355 (14%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LRVVFMGT FAV +L+ L+ +V V TQP RP G RGL V A+E +P
Sbjct: 177 LRVVFMGTPSFAVPSLEELLQRHVRVVGVVTQPDRPQG-RGLAPAAPPVKALAEENGIPV 235
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P +L EQ ++ D+ VVVAYG ++P +L +LG N HASLLPR RGAAPI
Sbjct: 236 LQPERLDDAVVEQLRAWRPDLLVVVAYGKILPPAVLAVPRLGAINVHASLLPRHRGAAPI 295
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI+AGD TG+ M MD+ LDTG V +++P+ I L L+ L A + + +
Sbjct: 296 QRAILAGDRVTGVTTMWMDEGLDTGDVILQKEIPLDEEITAGQLHDRLARLGAQLLGDTL 355
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + P PQ T A K++ E V++ R A V IRAL P PGA
Sbjct: 356 RLVAEGKAPRRPQDPAQATVAPKLAPEEEWVDWNRPAAEVARQIRALDPRPGARTT---- 411
Query: 243 NKHERIKLLESQLVE--------------------------------------------G 258
+ + +K+ +
Sbjct: 412 WRGQVLKVYGATAAPPRQAGGAAGAGEGAGVGEPEPPGGPGAAGEAAASGGPVRPGAGSE 471
Query: 259 EGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
PG ++ + C +G V I RLQ AG R L + L G + +G +G
Sbjct: 472 PAPPGTIVALTPDAAAVRCREGVVWIRRLQPAGRRPLTPLEMLNGYRLAVGERLG 526
>gi|239636305|ref|ZP_04677307.1| methionyl-tRNA formyltransferase [Staphylococcus warneri L37603]
gi|239597660|gb|EEQ80155.1| methionyl-tRNA formyltransferase [Staphylococcus warneri L37603]
Length = 310
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 101/308 (32%), Positives = 167/308 (54%), Gaps = 13/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ +++FMGT +F+ L+ L+ + +V+V TQP RP G R V K A E +
Sbjct: 1 MS-KIIFMGTPDFSTKVLEMLI-AEQEVVAVVTQPDRPVG-RKRVMTPPPVKKVALEHDI 57
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K+ + + L +AD+ V A+G ++P+ +L++ KLG N HASLLP++RG
Sbjct: 58 PVYQPEKIKDSDELQTLLDMDADLIVTAAFGQILPESLLDSPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + R + I + N + +LS L A +
Sbjct: 118 APIHQAIIDGEKETGITIMYMVKKLDAGNIISQRAIAIEQDDNVGSMHDKLSFLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + Q E ++A IS+ + ++N+ + A+ +HNHIR LSP+P A+ M
Sbjct: 178 ETLPSILDGTNDSIVQDEAQASFASNISREDEKINWNQDAQVIHNHIRGLSPWPVAYTIM 237
Query: 240 MIGNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIAC-SQGAVRIMRLQRAGGRVLDI 294
N +K+ + +V G +G+PG ++ +A S + + +Q AG + + +
Sbjct: 238 DDKN----LKIYSAHIVSGKKGEPGTIVETTKKAIVVATASDECIALTDIQLAGKKRMQV 293
Query: 295 GDFLLGCP 302
++L G
Sbjct: 294 ANYLSGVQ 301
>gi|271964330|ref|YP_003338526.1| methionyl-tRNA formyltransferase [Streptosporangium roseum DSM
43021]
gi|270507505|gb|ACZ85783.1| methionyl-tRNA formyltransferase [Streptosporangium roseum DSM
43021]
Length = 309
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 154/314 (49%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT + A+ +L+AL+ S H +V+V T+P +G RG K S V + A+E +
Sbjct: 1 MRLVFAGTPDTALPSLRALLDSPRHDVVAVVTRPDAQSG-RGRKVHPSPVAELAEEAGIE 59
Query: 62 A-LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E+ + D VVAYG ++PQ L+ + G+ N H SLLP WRGAA
Sbjct: 60 VLRPPKAGDPDFLERLRRIDPDCCPVVAYGALLPQSALDIPRHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A++ GD TG A ++ + LD GPV + + ++ L L+ A +V
Sbjct: 120 PVQHAVLHGDQITGAATFRIVRELDAGPVYGVVTEEVRPADSSGDLLARLAESGAGLLVA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D +E L PQ G++ A KI + RV++ A V IRA +P PGAW E
Sbjct: 180 TLDGIEDGKLEAVPQPAEGVSLAPKIGVDDARVDWSAPAMRVDRLIRACTPAPGAWTEF- 238
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +R+KL + PG + + + + V + +Q G R++ G+
Sbjct: 239 ---RGQRVKLGPVRPAPDAPALDPGRIAASKNSVLVGTATHPVELGEVQPQGKRLMGAGE 295
Query: 297 FLLGCPVIIGCIVG 310
+ G +G
Sbjct: 296 WARGVRPADEDRLG 309
>gi|84622204|ref|YP_449576.1| methionyl-tRNA formyltransferase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|161899018|ref|YP_199225.2| methionyl-tRNA formyltransferase [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|188574934|ref|YP_001911863.1| methionyl-tRNA formyltransferase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|73919428|sp|Q5H5D0|FMT_XANOR RecName: Full=Methionyl-tRNA formyltransferase
gi|123752823|sp|Q2P825|FMT_XANOM RecName: Full=Methionyl-tRNA formyltransferase
gi|238689453|sp|B2SL54|FMT_XANOP RecName: Full=Methionyl-tRNA formyltransferase
gi|84366144|dbj|BAE67302.1| Methionyl-tRNA formyltransferase [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|188519386|gb|ACD57331.1| methionyl-tRNA formyltransferase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 307
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 112/305 (36%), Positives = 164/305 (53%), Gaps = 9/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT +FAVA+L+A + H +V+VYTQP RPAG RG S V +A +
Sbjct: 1 MRIIFAGTPDFAVASLRA-AAQRHEVVAVYTQPDRPAG-RGRGLTPSPVKIEAIARGIAV 58
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E S NAD+ VVVAYGL++P +L G +N HASLLPRWRGAAP
Sbjct: 59 FQPQTLRSPEALATLRSLNADLMVVVAYGLILPNAVLAVPTHGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETG+ +M+M+ LD GPV +++ I L L+ L A + +
Sbjct: 119 IQRAIEAGDTETGVCLMQMEAGLDIGPVLLSQRIEIGEQETGGQLHDRLAALGAQVLSDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ G+TYA K+ K + R+++ + A+ + +RA +P+P E +
Sbjct: 179 LGLLRAGIRPVAQPQPAEGVTYAHKLDKAQARLDWAQPAQELARRVRAFNPWPV--AEAI 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + R+ + + + PG ++ IAC QGA+R+ LQR GG+ + D+
Sbjct: 237 LAGERVRLHGAVALELAHQQPPGSLLAASKQGIDIACGQGALRVRVLQREGGKAITAADY 296
Query: 298 LLGCP 302
L
Sbjct: 297 LNARR 301
>gi|330818687|ref|YP_004362392.1| Methionyl-tRNA formyltransferase [Burkholderia gladioli BSR3]
gi|327371080|gb|AEA62436.1| Methionyl-tRNA formyltransferase [Burkholderia gladioli BSR3]
Length = 327
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 123/321 (38%), Positives = 170/321 (52%), Gaps = 16/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E LP
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHQAGFPVPLVLTQPDRPAG-RGMKLQASAVKQYALEHGLP 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRNGKFPAEAATALDTLNATPHDVMVVAAYGLLLPQEVLDIPRHGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI R+I AGD ETG+ +M+MD LDTG + +V I+ + TA L +L+
Sbjct: 123 LPRWRGAAPIHRSIEAGDAETGVTLMQMDAGLDTGAMISEARVAIAGDDTTASLHDKLAT 182
Query: 173 LCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
L + + + + L SPQ GITYAEKI K E +++ AE + IRA P
Sbjct: 183 LGSQLIVEALVKLEREGKLAASPQPAEGITYAEKIGKHEAALDWREPAEVLARRIRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + ++ E++ G +PG ++ IAC G +R+ +LQ+ G
Sbjct: 243 FPGGAGTL--DGSVLKLWAAEAEAARGAAEPGTILEAGAEGVLIACGSGTLRVTQLQKPG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L +FL G P+ G
Sbjct: 301 GKRLPAREFLAGAPLAAGQRF 321
>gi|284024140|ref|ZP_06378538.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus 132]
Length = 311
Score = 155 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 108/317 (34%), Positives = 168/317 (52%), Gaps = 15/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A ++ L
Sbjct: 1 MT-KIIFMGTPDFSTTVLEMLI-AEHDVIAVVTQPDRPVG-RKRVMTPPPVKKVAMKYDL 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G EE EQ L + D+ V A+G ++P+ +L LG N HASLLP++RG
Sbjct: 58 PVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPNLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N N + +LSVL A +
Sbjct: 118 APIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ + T+A I + + R+++ + V N IR LSP+P A+ M
Sbjct: 178 ETLPSIIEGKNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N +K+ +++LVE +PG +I +A + AV I +Q AG + +
Sbjct: 238 DDTN----LKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRML 293
Query: 294 IGDFLLGCPVI-IGCIV 309
++L G +G +
Sbjct: 294 AANYLSGAQNTLVGKKL 310
>gi|299821750|ref|ZP_07053638.1| methionyl-tRNA formyltransferase [Listeria grayi DSM 20601]
gi|299817415|gb|EFI84651.1| methionyl-tRNA formyltransferase [Listeria grayi DSM 20601]
Length = 314
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 102/320 (31%), Positives = 163/320 (50%), Gaps = 17/320 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L+ L + ++V TQP RP G R V A+E+ +
Sbjct: 1 MT-KIIFMGTPEFSVPVLKRLAER-YDCIAVVTQPDRPVG-RKRVLTPPPVKVAAEEYGI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K EE + + AD+ V AYG ++P+ +L+A K G N HASLLP++RG
Sbjct: 58 PVYQPEKLRTSEELQTLIDLEADLLVTAAYGQILPKALLDAPKHGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A+M G+ ETG+ IM M++ LD G + R +PI+ NT L +LS L A ++
Sbjct: 118 APVHYAVMNGEKETGVTIMYMEEALDAGDMIASRAIPITDADNTGILFDKLSQLGADLLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + PQ E+ +T+A IS+ + ++++ +S + N IR LSP+P A+ +
Sbjct: 178 ETLPDFLAGRTKAIPQDESQVTFARNISREQEKIDWSKSGRTIFNQIRGLSPWPVAYTLL 237
Query: 240 MIGNKHERIKLLESQLVEG---EGKPGEVI---NPNFTIACSQGAVR-IMRLQRAGGRVL 292
+ K+ E+ + + E + G ++ I+ G V +Q AG +
Sbjct: 238 AG----KTFKIWEATIDDNQHVEAEAGTIVIAQKDQLGISAGDGTVIFPTVIQPAGKPKM 293
Query: 293 DIGDFLLG--CPVIIGCIVG 310
I +L G + G
Sbjct: 294 TIQSYLAGALASLKNEARFG 313
>gi|57651785|ref|YP_186091.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus COL]
gi|87161486|ref|YP_493806.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88194922|ref|YP_499722.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151221338|ref|YP_001332160.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus str. Newman]
gi|161509388|ref|YP_001575047.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221142006|ref|ZP_03566499.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|258452513|ref|ZP_05700519.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A5948]
gi|262048117|ref|ZP_06021004.1| methionyl-tRNA formyltransferase [Staphylococcus aureus D30]
gi|262051849|ref|ZP_06024065.1| methionyl-tRNA formyltransferase [Staphylococcus aureus 930918-3]
gi|282919998|ref|ZP_06327727.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A9765]
gi|294848209|ref|ZP_06788956.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A9754]
gi|304381221|ref|ZP_07363874.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|71152054|sp|Q5HGL6|FMT_STAAC RecName: Full=Methionyl-tRNA formyltransferase
gi|123003478|sp|Q2FZ68|FMT_STAA8 RecName: Full=Methionyl-tRNA formyltransferase
gi|123486229|sp|Q2FHM2|FMT_STAA3 RecName: Full=Methionyl-tRNA formyltransferase
gi|172048852|sp|A6QGB6|FMT_STAAE RecName: Full=Methionyl-tRNA formyltransferase
gi|189044553|sp|A8Z3Q2|FMT_STAAT RecName: Full=Methionyl-tRNA formyltransferase
gi|57285971|gb|AAW38065.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus COL]
gi|87127460|gb|ABD21974.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87202480|gb|ABD30290.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150374138|dbj|BAF67398.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus str. Newman]
gi|160368197|gb|ABX29168.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|257859731|gb|EEV82573.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A5948]
gi|259160250|gb|EEW45278.1| methionyl-tRNA formyltransferase [Staphylococcus aureus 930918-3]
gi|259163683|gb|EEW48238.1| methionyl-tRNA formyltransferase [Staphylococcus aureus D30]
gi|269940708|emb|CBI49089.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus TW20]
gi|282594714|gb|EFB99698.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A9765]
gi|294825009|gb|EFG41431.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A9754]
gi|302751039|gb|ADL65216.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340204|gb|EFM06145.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315198453|gb|EFU28782.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus CGS01]
gi|320140969|gb|EFW32816.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320144316|gb|EFW36082.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus MRSA177]
gi|329313885|gb|AEB88298.1| Methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus T0131]
gi|329724735|gb|EGG61240.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus 21189]
Length = 311
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 108/317 (34%), Positives = 168/317 (52%), Gaps = 15/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A ++ L
Sbjct: 1 MT-KIIFMGTPDFSTTVLEMLI-AEHDVIAVVTQPDRPVG-RKRVMTPPPVKKVAMKYDL 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G EE EQ L + D+ V A+G ++P+ +L LG N HASLLP++RG
Sbjct: 58 PVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPNLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N N + +LSVL A +
Sbjct: 118 APIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ + T+A I + + R+++ + V N IR LSP+P A+ M
Sbjct: 178 ETLPSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N +K+ +++LVE +PG +I +A + AV I +Q AG + +
Sbjct: 238 DDTN----LKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRML 293
Query: 294 IGDFLLGCPVI-IGCIV 309
++L G +G +
Sbjct: 294 AANYLSGAQNTLVGKKL 310
>gi|253733546|ref|ZP_04867711.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus TCH130]
gi|253728600|gb|EES97329.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus TCH130]
Length = 311
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 109/317 (34%), Positives = 169/317 (53%), Gaps = 15/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A ++ L
Sbjct: 1 MT-KIIFMGTPDFSTTVLEMLI-AEHDVIAVVTQPDRPVG-RKRVMTPPPVKKVAMKYDL 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G EE EQ L + D+ V A+G ++P+ +L KLG N HASLLP++RG
Sbjct: 58 PVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N N + +LSVL A +
Sbjct: 118 APIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ + T+A I + + R+++ + V N IR LSP+P A+ M
Sbjct: 178 ETLPSIIEGTNESVPQDDTQATFASNIRRQDERISWNKPGRQVFNQIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N +K+ +++LVE +PG +I +A + AV I +Q AG + +
Sbjct: 238 DDTN----LKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRML 293
Query: 294 IGDFLLGCPVI-IGCIV 309
++L G +G +
Sbjct: 294 AANYLSGAQNTLVGKKL 310
>gi|21282828|ref|NP_645916.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus MW2]
gi|49486055|ref|YP_043276.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|297208140|ref|ZP_06924571.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300912220|ref|ZP_07129663.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus TCH70]
gi|23821552|sp|Q8NX18|FMT_STAAW RecName: Full=Methionyl-tRNA formyltransferase
gi|56748911|sp|Q6G9Z7|FMT_STAAS RecName: Full=Methionyl-tRNA formyltransferase
gi|21204267|dbj|BAB94964.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus MW2]
gi|49244498|emb|CAG42927.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|296887383|gb|EFH26285.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300886466|gb|EFK81668.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus TCH70]
Length = 311
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 110/317 (34%), Positives = 169/317 (53%), Gaps = 15/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A ++ L
Sbjct: 1 MT-KIIFMGTPDFSTTVLEMLI-AEHDVIAVVTQPDRPVG-RKRVMTPPPVKKVAMKYDL 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G EE EQ L + D+ V A+G ++P+ +L KLG N HASLLP++RG
Sbjct: 58 PVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N N + +LSVL A +
Sbjct: 118 APIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ + T+A I + + R+N+ + V N IR LSP+P A+ M
Sbjct: 178 ETLPSIIEGTNESVPQDDTQATFASNIRREDERINWNKPGRQVFNQIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N +K+ +++LVE +PG +I +A + AV I +Q AG + +
Sbjct: 238 DDTN----LKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRML 293
Query: 294 IGDFLLGCPVI-IGCIV 309
++L G +G +
Sbjct: 294 AANYLSGAQNTLVGKKL 310
>gi|209515833|ref|ZP_03264695.1| methionyl-tRNA formyltransferase [Burkholderia sp. H160]
gi|209503681|gb|EEA03675.1| methionyl-tRNA formyltransferase [Burkholderia sp. H160]
Length = 331
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 126/323 (39%), Positives = 178/323 (55%), Gaps = 16/323 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K S V + AQE L
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHRAGFPVPLVLTQPDRPAG-RGMKLQASPVKRFAQEHGLA 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
PT L + + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPTSLRRAGKYPQEAAAGIEQLRATPHDVMVVAAYGLILPQEVLDIPRFGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD +TGI +M++D LDTG + + PIS++ TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAQTGITLMQVDAGLDTGAMISEVRTPISADDTTATLHDRLAE 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +VEA+ +LE++ +PQ +G+TYAEKI+K E +++ R AE + +RA P
Sbjct: 183 DGAQLIVEALIELERSGKLASTPQPADGVTYAEKIAKHEAALDWRRPAEALARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLE-SQLVEGEGK-PGEVIN---PNFTIACSQGAVRIMRLQR 286
FPG + G+ + + G K PG + +AC +GA+R+ +LQ+
Sbjct: 243 FPGGAGTLEDGSIIKIWAATAVATPASGNNKAPGTIAEISPDGVLVACGEGALRLTQLQK 302
Query: 287 AGGRVLDIGDFLLGCPVIIGCIV 309
GG+ L + +FL G + G
Sbjct: 303 PGGKRLPVREFLAGSALAAGQRF 325
>gi|283470428|emb|CAQ49639.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus ST398]
Length = 311
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 109/317 (34%), Positives = 168/317 (52%), Gaps = 15/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT +F+ L+ L+ H +++V TQP RP G R V K A ++ L
Sbjct: 1 MT-KIIFMGTPDFSTTVLEMLIE-EHDVIAVVTQPDRPVG-RKRVMTPPPVKKVAMKYDL 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G EE EQ L + D+ V A+G ++P+ +L KLG N HASLLP++RG
Sbjct: 58 PVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N N + +LSVL A +
Sbjct: 118 APIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ + T+A I + + R+++ + V N IR LSP+P A+ M
Sbjct: 178 ETLPSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N +K+ +++LVE +PG +I +A + AV I +Q AG + +
Sbjct: 238 DDIN----LKIYDAELVETNKINEPGTIIDTTKKAIIVATNDNEAVAIKDMQLAGKKRML 293
Query: 294 IGDFLLGCPVI-IGCIV 309
++L G +G +
Sbjct: 294 AANYLSGAQNTLVGKKL 310
>gi|167750830|ref|ZP_02422957.1| hypothetical protein EUBSIR_01813 [Eubacterium siraeum DSM 15702]
gi|167656265|gb|EDS00395.1| hypothetical protein EUBSIR_01813 [Eubacterium siraeum DSM 15702]
Length = 306
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 98/311 (31%), Positives = 163/311 (52%), Gaps = 15/311 (4%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +FAV+ L+ L H++++V+TQP +P RG K V + A+++ +P P
Sbjct: 1 MGTPDFAVSALEELHK-HHNVMAVFTQPDKPK-NRGKKMQAPPVKECAEKYGIPVYQPLS 58
Query: 68 LGQEEYEQF-----LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L + E + D VV AYG ++P+ IL K N HASLLP++RGAAPI
Sbjct: 59 LRKGEDAEKSLELLKQLAPDCIVVAAYGQLLPESILELPKYKCINIHASLLPKYRGAAPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q+ I+ G+ E+G+ M M K LDTG + R V I+ ++ L L+ ++E +
Sbjct: 119 QKCIIDGETESGVTTMLMAKGLDTGDMLMSRSVKITPDMTGGELHDSLAATGGELIIETL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
E+ + PQ ++ YA I+K R++F ++A +V+N IR +SP P A+ +
Sbjct: 179 KACEEGTIKPVPQDDSLSCYAGLITKEMCRIDFSKNAIDVYNFIRGMSPSPCAYTFIGD- 237
Query: 243 NKHERIKLLESQLVE-GEGKP-GEVIN-PNFTIACSQG-AVRIMRLQRAGGRVLDIGDFL 298
+R+K+ + + + KP G V+N + T+ C +R +Q GG+ ++ FL
Sbjct: 238 ---KRLKVYFAVMTDITSDKPCGTVVNENDLTVVCGDKKCIRFTDVQGEGGKRMNTASFL 294
Query: 299 LGCPVIIGCIV 309
G + ++
Sbjct: 295 NGNKLQRDTVL 305
>gi|254246864|ref|ZP_04940185.1| Methionyl-tRNA formyltransferase [Burkholderia cenocepacia PC184]
gi|124871640|gb|EAY63356.1| Methionyl-tRNA formyltransferase [Burkholderia cenocepacia PC184]
Length = 330
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 126/326 (38%), Positives = 178/326 (54%), Gaps = 23/326 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 4 TLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYAVEHGMA 62
Query: 62 ALVPTKLGQEEYEQFLS---------FNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAADAIELLRTTPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + ++PI+ + TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIEEARLPIAPDDTTATLHDRLAA 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V+A+ +LE++ P +PQ +G+TYAEKI K E +++ + A+ + +RA P
Sbjct: 183 DGARLIVDALVRLERDGTLPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGK-----PGEVIN---PNFTIACSQGAVRIMR 283
FPG + IKL ++ V G PG ++ +AC GA+R+ +
Sbjct: 243 FPGGVATLDGAA----IKLWAAEPVAAHGTIATAAPGTIVEAAPEGVVVACGSGALRVTQ 298
Query: 284 LQRAGGRVLDIGDFLLGCPVIIGCIV 309
LQ+ GG+ L +FL G P+ G
Sbjct: 299 LQKPGGKRLPAREFLAGSPLAAGQRF 324
>gi|198282169|ref|YP_002218490.1| methionyl-tRNA formyltransferase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218665976|ref|YP_002424534.1| methionyl-tRNA formyltransferase [Acidithiobacillus ferrooxidans
ATCC 23270]
gi|259646021|sp|B7J3C1|FMT_ACIF2 RecName: Full=Methionyl-tRNA formyltransferase
gi|259646022|sp|B5EJ84|FMT_ACIF5 RecName: Full=Methionyl-tRNA formyltransferase
gi|198246690|gb|ACH82283.1| methionyl-tRNA formyltransferase [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218518189|gb|ACK78775.1| methionyl-tRNA formyltransferase [Acidithiobacillus ferrooxidans
ATCC 23270]
Length = 313
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 110/311 (35%), Positives = 157/311 (50%), Gaps = 7/311 (2%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R+VF GT EFA TL L ++V V+TQP RPAG RG S V ++A +P
Sbjct: 6 RIVFAGTPEFARITLAELRQGPEAVVGVFTQPDRPAG-RGRTLQASPVKQEALAAGIPVF 64
Query: 64 VPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P E + S D+ +VVAYG ++PQ IL G N HASLLP WRGAAPI
Sbjct: 65 QPESCKTGEALELLRSLAPDLLIVVAYGQILPQAILALPTRGAINVHASLLPAWRGAAPI 124
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
RAI AGD E+G+AIM+M+ LD+GPV + ++PI+++ A L L+ L A+ +
Sbjct: 125 ARAIAAGDKESGVAIMQMEAGLDSGPVLWEERLPIAADDTAASLHDRLARLGGKALRHVL 184
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D L L PQ +TYA K+ K E +++ A + +RA +P P A
Sbjct: 185 DDLWAERLKPVPQDPALVTYAHKLKKEEALLDWRLPAATLERLVRAFNPSPVAHTLFRDK 244
Query: 243 NKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
R+ G+ PG + + C + ++++ +Q AG VL DF
Sbjct: 245 G--LRVWQARVLGAGGDQAPGSISAVEKDGVVVTCGEDRLQLLAVQPAGKGVLSGSDFAR 302
Query: 300 GCPVIIGCIVG 310
G +G ++G
Sbjct: 303 GYRPQVGEVLG 313
>gi|108799350|ref|YP_639547.1| methionyl-tRNA formyltransferase [Mycobacterium sp. MCS]
gi|119868466|ref|YP_938418.1| methionyl-tRNA formyltransferase [Mycobacterium sp. KMS]
gi|126435008|ref|YP_001070699.1| methionyl-tRNA formyltransferase [Mycobacterium sp. JLS]
gi|123369316|sp|Q1B9E3|FMT_MYCSS RecName: Full=Methionyl-tRNA formyltransferase
gi|166215484|sp|A3PZ81|FMT_MYCSJ RecName: Full=Methionyl-tRNA formyltransferase
gi|166215485|sp|A1UFM0|FMT_MYCSK RecName: Full=Methionyl-tRNA formyltransferase
gi|108769769|gb|ABG08491.1| methionyl-tRNA formyltransferase [Mycobacterium sp. MCS]
gi|119694555|gb|ABL91628.1| methionyl-tRNA formyltransferase [Mycobacterium sp. KMS]
gi|126234808|gb|ABN98208.1| methionyl-tRNA formyltransferase [Mycobacterium sp. JLS]
Length = 308
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 102/308 (33%), Positives = 149/308 (48%), Gaps = 10/308 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+ +LQ L++S H +V+V T+P AGRRG S V + A + +P
Sbjct: 1 MRLVFAGTPEPALPSLQRLIASPRHEVVAVLTRPDAAAGRRGR-PTPSPVARLALDHDIP 59
Query: 62 A-LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E + D VVAYG ++ +R+L G+ N H SLLP WRGAA
Sbjct: 60 VLRPPKPNSEEFVAELRELAPDCCAVVAYGALLSERLLAVPPHGWINLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG ++ LD+GPV + I +N L L+ AH +
Sbjct: 120 PVQAAIAAGDAVTGATTFLIEPALDSGPVYGVVTETIRANDTAGELLTRLAESGAHLLES 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + L PQ +G+T A KI+ E RV + A V IRA++P PGAW +
Sbjct: 180 TLDGIADGRLQAVPQPADGVTVAPKITVDEARVRWDLPAHVVDRRIRAVTPNPGAWTVIG 239
Query: 241 IGNKHERIKLLESQLVEGE-GKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
R+KL E PG V+ + + VR+ +Q G + ++ D+
Sbjct: 240 DA----RVKLGPVAPESAEPLAPGAIRVLKNAVHVGTATEPVRLGTVQPPGKKPMNAADW 295
Query: 298 LLGCPVII 305
G +
Sbjct: 296 ARGARLDA 303
>gi|302332820|gb|ADL23013.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 311
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 109/317 (34%), Positives = 169/317 (53%), Gaps = 15/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A ++ L
Sbjct: 1 MT-KIIFMGTPDFSTTVLEMLI-AEHDVIAVVTQPDRPVG-RKRVMTPPPVKKVAMKYDL 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G EE EQ L + D+ V A+G ++P+ +L KLG N HASLLP++RG
Sbjct: 58 PVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N N + +LSVL A +
Sbjct: 118 APIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ + T+A I + + R+++ + V N IR LSP+P A+ M
Sbjct: 178 ETLPSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N +K+ +++LVE +PG +I +A + AV I +Q AG + +
Sbjct: 238 DDIN----LKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRML 293
Query: 294 IGDFLLGCPVI-IGCIV 309
++L G +G +
Sbjct: 294 AANYLSGAQNTLVGKKL 310
>gi|282908509|ref|ZP_06316339.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus WW2703/97]
gi|282327571|gb|EFB57854.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus WW2703/97]
Length = 311
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 109/317 (34%), Positives = 169/317 (53%), Gaps = 15/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A ++ L
Sbjct: 1 MT-KIIFMGTPDFSTTVLEMLI-AEHDVIAVVTQPDRPVG-RKRVMTPPPVKKVAMKYDL 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G EE EQ L + D+ V A+G ++P+ +L KLG N HASLLP++RG
Sbjct: 58 PVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N N + +LSVL A +
Sbjct: 118 APIHQAIIDGEQETGITIMYMVKKLDVGNIISQQAIKIEENDNVGTMHDKLSVLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ + T+A I + + R+++ + V N IR LSP+P A+ M
Sbjct: 178 ETLPSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N +K+ +++LVE +PG +I +A + AV I +Q AG + +
Sbjct: 238 DDTN----LKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRML 293
Query: 294 IGDFLLGCPVI-IGCIV 309
++L G +G +
Sbjct: 294 AANYLSGAQNTLVGKKL 310
>gi|253731833|ref|ZP_04865998.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|253724432|gb|EES93161.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus USA300_TCH959]
Length = 311
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 109/317 (34%), Positives = 169/317 (53%), Gaps = 15/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A ++ L
Sbjct: 1 MT-KIIFMGTPDFSTTVLEMLI-AEHDVIAVVTQPDRPVG-RKRVMTPPPVKKVAMKYDL 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G EE EQ L + D+ V A+G ++P+ +L KLG N HASLLP++RG
Sbjct: 58 PVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N N + +LSVL A +
Sbjct: 118 APIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ + T+A I + + R+++ + V N IR LSP+P A+ M
Sbjct: 178 ETLPSIIEGINESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N +K+ +++LVE +PG +I +A + AV I +Q AG + +
Sbjct: 238 DDTN----LKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRML 293
Query: 294 IGDFLLGCPVI-IGCIV 309
++L G +G +
Sbjct: 294 AANYLSGAQNTLVGKKL 310
>gi|329118893|ref|ZP_08247588.1| methionyl-tRNA formyltransferase [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464921|gb|EGF11211.1| methionyl-tRNA formyltransferase [Neisseria bacilliformis ATCC
BAA-1200]
Length = 309
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 122/314 (38%), Positives = 177/314 (56%), Gaps = 11/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT +FA A L+A+ ++ I V TQP RP G RG++ S V + A E L
Sbjct: 1 MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKG-RGMQLQASPVKQAALELGLRV 59
Query: 63 LVPTKLGQEEYEQ--FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P KL S ADV VV AYGL++PQ++L+ + G N HASLLPRWRGAA
Sbjct: 60 AQPEKLRGNADALALIESAGADVMVVAAYGLILPQQVLDTPRHGCLNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETG+ IM+MD LDTG V + I ++ + L + A A+V
Sbjct: 120 PIQRAIEAGDQETGVCIMQMDAGLDTGGVVSEHRYTIKNSDTANEVHDALMEIGAAAIVA 179
Query: 181 AMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +L++ Q ENG+TYA+K+SK E R+++ A+ V IRA +P P AW +
Sbjct: 180 DLQQLQREGRLKTVKQPENGVTYAQKLSKEEARIDWNEPAQTVERKIRAFNPVPAAWTQY 239
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+ + + G+PG+V+ + T+AC +GA+ I LQ AGG+ +
Sbjct: 240 QG----KPLKIWRAGVSPQNGRPGQVLACNSDGLTVACGEGALTITELQSAGGKRMAAAA 295
Query: 297 FLLGCPVIIGCIVG 310
F G + G ++G
Sbjct: 296 FAAGHSIAAGEVLG 309
>gi|56751991|ref|YP_172692.1| methionyl-tRNA formyltransferase [Synechococcus elongatus PCC 6301]
gi|81300919|ref|YP_401127.1| methionyl-tRNA formyltransferase [Synechococcus elongatus PCC 7942]
gi|73919422|sp|Q5N0J8|FMT_SYNP6 RecName: Full=Methionyl-tRNA formyltransferase
gi|123728141|sp|Q31LC9|FMT_SYNE7 RecName: Full=Methionyl-tRNA formyltransferase
gi|56686950|dbj|BAD80172.1| methionyl-tRNA formyltransferase [Synechococcus elongatus PCC 6301]
gi|81169800|gb|ABB58140.1| methionyl-tRNA formyltransferase [Synechococcus elongatus PCC 7942]
Length = 327
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 102/326 (31%), Positives = 164/326 (50%), Gaps = 20/326 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+RVVF GT +FAV TLQ L+ + +++V +QP R G RG + S V A + LP
Sbjct: 1 MRVVFFGTPQFAVPTLQQLLDAPDVEVMAVVSQPDRRRG-RGNQVSASPVKALAIAYDLP 59
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P +L ++ Q AD VVVAYG ++P +L +LG N H SLLP +RGA
Sbjct: 60 VWQPERLRRDPEVLSQLQQTQADAFVVVAYGQLLPAEVLAMPRLGCINVHGSLLPAYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ +++ GD ETGI M+MD +DTGP+ PI+ + N+ L L+ A ++
Sbjct: 120 APIQWSLINGDRETGIVTMQMDVGMDTGPMLLRWTTPIALDDNSQTLGDRLATAGAELLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE- 238
+ + +L+Q +L Q E TYA + K + ++++ +SA +HN IR L P ++
Sbjct: 180 QTLRQLDQGHLTAISQNEAEATYARLLQKEDFQLSWDQSALELHNRIRGLYPGASLPVQG 239
Query: 239 -----------MMIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMR 283
+ + + +PG V+ + +A +GA+ +++
Sbjct: 240 DRLKVLASLPLGLGLLLSAAYADWQDWQPDPAAQPGTVLAIAKSLGPIVATREGALLLLQ 299
Query: 284 LQRAGGRVLDIGDFLLGCPVIIGCIV 309
+Q AG + L D+ G + G +
Sbjct: 300 VQPAGRKPLSGWDWANGLRLQEGLSL 325
>gi|218290477|ref|ZP_03494597.1| methionyl-tRNA formyltransferase [Alicyclobacillus acidocaldarius
LAA1]
gi|218239498|gb|EED06693.1| methionyl-tRNA formyltransferase [Alicyclobacillus acidocaldarius
LAA1]
Length = 314
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 110/306 (35%), Positives = 160/306 (52%), Gaps = 10/306 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MTLRV+F GT +FAV +L+AL + +V V TQP RP G R V +A E L
Sbjct: 1 MTLRVLFCGTPDFAVPSLEALCRLGYEVV-VITQPDRPRG-RSRNLAPPPVKVRALELGL 58
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + ++ + F D+ V AYG ++ + +L+ ++G N HASLLPRWRGAA
Sbjct: 59 PV-WQPERLRDIMDDIRGFAPDLLVTAAYGKILSEALLSLPRIGSVNVHASLLPRWRGAA 117
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETGI +M+M + LD GP+ +V I L +L+ L
Sbjct: 118 PIQRAIWAGDAETGITLMEMVRDLDAGPILAQERVAIEPTDTAGSLHDKLAALGGEVCER 177
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + L PQ E G+TYAEK+++ + +++ RSA + +RAL+P PGA +
Sbjct: 178 YLPRYVAGELVPVPQPEEGVTYAEKLTREDEWIDWTRSAVEIDRQVRALAPVPGATAALT 237
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
E +K+L + +E G PGEV ++C G I ++ +G R + G
Sbjct: 238 T---GEELKILAGRPIETATFGDPGEVEPRGDALWVSCGAGVYEISEVKPSGRRAMPAGA 294
Query: 297 FLLGCP 302
F G
Sbjct: 295 FWRGLR 300
>gi|253315574|ref|ZP_04838787.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
Length = 311
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 109/317 (34%), Positives = 169/317 (53%), Gaps = 15/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A ++ L
Sbjct: 1 MT-KIIFMGTPDFSTTVLEMLI-AEHDVIAVVTQPDRPVG-RKRVMTPPPVKKVAMKYDL 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G EE EQ L + D+ V A+G ++P+ +L KLG N HASLLP++RG
Sbjct: 58 PVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N N + +LSVL A +
Sbjct: 118 APIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ + T+A I + + R+++ + V N IR LSP+P A+ M
Sbjct: 178 ETLPSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N +K+ +++LVE +PG +I +A + AV I +Q AG + +
Sbjct: 238 DDTN----LKIYDAELVETNKINEPGTIIEMTKKAIIVATNDNEAVAIKDMQLAGKKRML 293
Query: 294 IGDFLLGCPVI-IGCIV 309
++L G +G +
Sbjct: 294 AANYLSGAQNTLVGKKL 310
>gi|15924206|ref|NP_371740.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus Mu50]
gi|15926799|ref|NP_374332.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus N315]
gi|49483379|ref|YP_040603.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|148267707|ref|YP_001246650.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus JH9]
gi|150393765|ref|YP_001316440.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus JH1]
gi|156979537|ref|YP_001441796.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus Mu3]
gi|255006003|ref|ZP_05144604.2| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257425269|ref|ZP_05601694.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257427929|ref|ZP_05604327.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257430562|ref|ZP_05606944.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257433323|ref|ZP_05609681.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus E1410]
gi|257436165|ref|ZP_05612212.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus M876]
gi|257795728|ref|ZP_05644707.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A9781]
gi|258415952|ref|ZP_05682222.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A9763]
gi|258419699|ref|ZP_05682666.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A9719]
gi|258438741|ref|ZP_05689894.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A9299]
gi|258444553|ref|ZP_05692882.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A8115]
gi|258447614|ref|ZP_05695758.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A6300]
gi|258449456|ref|ZP_05697559.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A6224]
gi|258454835|ref|ZP_05702799.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A5937]
gi|282892702|ref|ZP_06300937.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A8117]
gi|282903769|ref|ZP_06311657.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus C160]
gi|282905533|ref|ZP_06313388.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282910788|ref|ZP_06318591.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282913991|ref|ZP_06321778.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus M899]
gi|282918913|ref|ZP_06326648.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus C427]
gi|282924036|ref|ZP_06331712.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus C101]
gi|282927556|ref|ZP_06335172.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A10102]
gi|283957957|ref|ZP_06375408.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus A017934/97]
gi|293501024|ref|ZP_06666875.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus 58-424]
gi|293509983|ref|ZP_06668691.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus M809]
gi|293526571|ref|ZP_06671256.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus M1015]
gi|295407154|ref|ZP_06816955.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A8819]
gi|295427701|ref|ZP_06820333.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|296275237|ref|ZP_06857744.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus MR1]
gi|297245960|ref|ZP_06929819.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A8796]
gi|297591340|ref|ZP_06949978.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus MN8]
gi|54037121|sp|P99127|FMT_STAAN RecName: Full=Methionyl-tRNA formyltransferase
gi|54040769|sp|P64136|FMT_STAAM RecName: Full=Methionyl-tRNA formyltransferase
gi|56748922|sp|Q6GHL9|FMT_STAAR RecName: Full=Methionyl-tRNA formyltransferase
gi|166215517|sp|A7X1H4|FMT_STAA1 RecName: Full=Methionyl-tRNA formyltransferase
gi|189044554|sp|A5ISA1|FMT_STAA9 RecName: Full=Methionyl-tRNA formyltransferase
gi|189044555|sp|A6U135|FMT_STAA2 RecName: Full=Methionyl-tRNA formyltransferase
gi|13701016|dbj|BAB42311.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus N315]
gi|14246986|dbj|BAB57378.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus Mu50]
gi|49241508|emb|CAG40194.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|147740776|gb|ABQ49074.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus JH9]
gi|149946217|gb|ABR52153.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus JH1]
gi|156721672|dbj|BAF78089.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus Mu3]
gi|257271726|gb|EEV03864.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus 55/2053]
gi|257274770|gb|EEV06257.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus 65-1322]
gi|257278690|gb|EEV09309.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus 68-397]
gi|257281416|gb|EEV11553.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus E1410]
gi|257284447|gb|EEV14567.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus M876]
gi|257789700|gb|EEV28040.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A9781]
gi|257839288|gb|EEV63762.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A9763]
gi|257844284|gb|EEV68666.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A9719]
gi|257848000|gb|EEV71993.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A9299]
gi|257850046|gb|EEV73999.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A8115]
gi|257853805|gb|EEV76764.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A6300]
gi|257857444|gb|EEV80342.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A6224]
gi|257863218|gb|EEV85982.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A5937]
gi|282314008|gb|EFB44400.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus C101]
gi|282316723|gb|EFB47097.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus C427]
gi|282322059|gb|EFB52383.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus M899]
gi|282325393|gb|EFB55702.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus WBG10049]
gi|282330825|gb|EFB60339.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus Btn1260]
gi|282590559|gb|EFB95636.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A10102]
gi|282595387|gb|EFC00351.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus C160]
gi|282764699|gb|EFC04824.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A8117]
gi|283790106|gb|EFC28923.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus A017934/97]
gi|285816898|gb|ADC37385.1| Methionyl-tRNA formyltransferase [Staphylococcus aureus 04-02981]
gi|290920643|gb|EFD97706.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus M1015]
gi|291096029|gb|EFE26290.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466927|gb|EFF09445.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus M809]
gi|294968007|gb|EFG44035.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A8819]
gi|295128059|gb|EFG57693.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297177124|gb|EFH36378.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A8796]
gi|297576226|gb|EFH94942.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus MN8]
gi|312438407|gb|ADQ77478.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus TCH60]
gi|312829610|emb|CBX34452.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315131007|gb|EFT86991.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus CGS03]
gi|315194102|gb|EFU24495.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus CGS00]
gi|329727359|gb|EGG63815.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus 21172]
gi|329728785|gb|EGG65206.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus 21193]
Length = 311
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 109/317 (34%), Positives = 169/317 (53%), Gaps = 15/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A ++ L
Sbjct: 1 MT-KIIFMGTPDFSTTVLEMLI-AEHDVIAVVTQPDRPVG-RKRVMTPPPVKKVAMKYDL 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G EE EQ L + D+ V A+G ++P+ +L KLG N HASLLP++RG
Sbjct: 58 PVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N N + +LSVL A +
Sbjct: 118 APIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ + T+A I + + R+++ + V N IR LSP+P A+ M
Sbjct: 178 ETLPSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N +K+ +++LVE +PG +I +A + AV I +Q AG + +
Sbjct: 238 DDTN----LKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRML 293
Query: 294 IGDFLLGCPVI-IGCIV 309
++L G +G +
Sbjct: 294 AANYLSGAQNTLVGKKL 310
>gi|166713737|ref|ZP_02244944.1| methionyl-tRNA formyltransferase [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 307
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 113/305 (37%), Positives = 166/305 (54%), Gaps = 9/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT +FAVA+L+A + H +V+VYTQP RPAG RG S V +A +
Sbjct: 1 MRIIFAGTPDFAVASLRA-AAQRHEVVAVYTQPDRPAG-RGRGLTPSPVKIEAIARGIAV 58
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L E S NAD+ VVVAYGL++P+ +L A G +N HASLLPRWRGAAP
Sbjct: 59 FQPQTLRSPEALATLRSLNADLMVVVAYGLILPKAVLAAPTHGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETG+ +M+M+ LD GPV +++ I L L+ L A + +
Sbjct: 119 IQRAIEAGDTETGVCLMQMEAGLDIGPVLLSQRIEIGEQETGGQLHDRLAALGAQVLSDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ G+TYA K+ K + R+++ + A+ + +RA +P+P E +
Sbjct: 179 LGLLRAGIRPVAQPQPAEGVTYAHKLDKAQARLDWAQPAQELARRVRAFNPWPV--AEAI 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + R+ + + + PG ++ IAC QGA+R+ LQR GG+ + D+
Sbjct: 237 LAGERVRLHGAVALELAHQQPPGSLLAASKQGIDIACGQGALRVRVLQREGGKAITAADY 296
Query: 298 LLGCP 302
L
Sbjct: 297 LNARR 301
>gi|269202831|ref|YP_003282100.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus ED98]
gi|262075121|gb|ACY11094.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus ED98]
Length = 311
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 109/317 (34%), Positives = 169/317 (53%), Gaps = 15/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A ++ L
Sbjct: 1 MT-KIIFMGTPDFSTTVLEMLI-AEHDVIAVVTQPDRPVG-RKRVMTPPPVKKVAMKYDL 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G EE EQ L + D+ V A+G ++P+ +L KLG N HASLLP++RG
Sbjct: 58 PVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N N + +LSVL A +
Sbjct: 118 APIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGAELLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ + T+A I + + R+++ + V N IR LSP+P A+ M
Sbjct: 178 ETLPSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N +K+ +++LVE +PG +I +A + AV I +Q AG + +
Sbjct: 238 DDTN----LKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRML 293
Query: 294 IGDFLLGCPVI-IGCIV 309
++L G +G +
Sbjct: 294 AANYLSGAQNTLVGKKL 310
>gi|313885212|ref|ZP_07818964.1| methionyl-tRNA formyltransferase [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619903|gb|EFR31340.1| methionyl-tRNA formyltransferase [Eremococcus coleocola
ACS-139-V-Col8]
Length = 322
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 91/309 (29%), Positives = 154/309 (49%), Gaps = 15/309 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M +V+FMGT F+ LQ L+ S + I++V TQP RP G R S V + AQ +
Sbjct: 1 MK-KVIFMGTPAFSRTVLQGLIDSQAYEIMAVVTQPDRPVG-RKRVITPSPVKELAQAYG 58
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P K G ++ + + D+ + A+G +P+ ILNA K G N HASLLP++RG
Sbjct: 59 IPVLQPEKLAGSDQAKTIIEMKPDLIITAAFGQFLPKSILNAPKYGAINVHASLLPKYRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API AI G+ ETGI+++ M +D G + +PI + A + +++ L +
Sbjct: 119 GAPIHYAIWKGEKETGISLIYMTPKMDAGNILAQASLPILDRDDVADVFAKMADLGRDLL 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + + PQ E T++ ISK E + + ++A + H+RA PFP +
Sbjct: 179 LKTLPSVFAGTNQAWPQNEAEATFSPNISKEEEEIQWNQTAIEIDRHVRAFRPFPSTFTR 238
Query: 239 MMIGNKHERIKLLESQLVEGE---GKPGEVI---NPNFTIACSQGAV-RIMRLQRAGGRV 291
+ +R K+ + + G+ G+ G+++ + Q I +Q G +
Sbjct: 239 LKG----QRFKIWAGRPITGDFPQGQVGQIVASTEDQLIVQAGQNTYFAIEEVQPNGKKR 294
Query: 292 LDIGDFLLG 300
+ + +L G
Sbjct: 295 MPVKQYLNG 303
>gi|311109267|ref|YP_003982120.1| methionyl-tRNA formyltransferase [Achromobacter xylosoxidans A8]
gi|310763956|gb|ADP19405.1| methionyl-tRNA formyltransferase [Achromobacter xylosoxidans A8]
Length = 313
Score = 154 bits (389), Expect = 2e-35, Method: Composition-based stats.
Identities = 119/312 (38%), Positives = 163/312 (52%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA AL ++ H I V TQP RPAG RGLK S V + A E +
Sbjct: 1 MRLVFAGTPEFARIAFDALRAAGHEIPLVMTQPDRPAG-RGLKLTPSPVKQAALEAGIEV 59
Query: 63 LVPTKLGQEEYEQFLSFN---------ADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P L + + DV VV AYGL++PQ +L+ +LG N HASLL
Sbjct: 60 AQPRSLRLDGRYPEEASEAQALLQRVAPDVMVVAAYGLILPQWVLDLPRLGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPIQRAI AGD +TG+ IM+MD+ LDTG + R VPI + A L L++
Sbjct: 120 PRWRGAAPIQRAIEAGDAQTGVTIMQMDQGLDTGDMLLERVVPIGGDTTAAELHDALALA 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+VEA+ L Q L Q E G+TYA K+ K E ++ + A + +RA +P P
Sbjct: 180 GGEAIVEALAALAQGGLTPRKQPEAGVTYAAKLDKAEGALDCTQPAGLLARRVRAFNPVP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGR 290
GA + + ++ ++ PG V+ IA G +R++ LQ+AGG+
Sbjct: 240 GASIRLPGLADPVKVWRAQALDEATTAAPGSVLRVDTTGIDIATGSGVLRLLELQKAGGK 299
Query: 291 VLDIGDFLLGCP 302
+ F G
Sbjct: 300 RQPVDVFARGWQ 311
>gi|307728143|ref|YP_003905367.1| methionyl-tRNA formyltransferase [Burkholderia sp. CCGE1003]
gi|307582678|gb|ADN56076.1| methionyl-tRNA formyltransferase [Burkholderia sp. CCGE1003]
Length = 328
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 121/321 (37%), Positives = 167/321 (52%), Gaps = 15/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRVVF GT EFA A L A+ + + V TQP RPAG RG+K S V + A E L
Sbjct: 4 SLRVVFAGTPEFAAAALAAIHGAGFPVPLVLTQPDRPAG-RGMKLQASPVKRYAVEHGLA 62
Query: 62 ALVPTKLGQEEYE---------QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + Q + DV VV AYGL++PQ +L+ G N HASL
Sbjct: 63 LAQPQSLRRAGRYPAEAAAAIDQLRATPHDVMVVAAYGLILPQEVLDIAPFGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD +TGI +M+MD LDTG + + PIS++ TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAQTGITLMQMDAGLDTGAMISETRTPISADDTTATLHDRLAQ 182
Query: 173 LCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A + ++ + L +PQ +G+TYAEKI K E +++ R A + +RA P
Sbjct: 183 DGARLIVEALVELEKSGKLTSTPQPADGVTYAEKIGKHEAALDWRRPAAALARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + +I ++ PG VI +AC +GA+ + +LQ+ G
Sbjct: 243 FPGGVGTLED-GTSIKIWAATAENATSHAAPGTVIGVSAEGVVVACGEGALCLTQLQKPG 301
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L + +FL G + G
Sbjct: 302 GKRLPVREFLAGFALAAGQRF 322
>gi|298694509|gb|ADI97731.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus ED133]
Length = 311
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 109/317 (34%), Positives = 169/317 (53%), Gaps = 15/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A ++ L
Sbjct: 1 MT-KIIFMGTPDFSTTVLEMLI-AEHDVIAVVTQPDRPVG-RKRVMTPPPVKKVAMKYDL 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G EE EQ L + D+ V A+G ++P+ +L KLG N HASLLP++RG
Sbjct: 58 PVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N N + +LSVL A +
Sbjct: 118 APIHQAIIDGEQETGITIMYMIKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ + T+A I + + R+++ + V N IR LSP+P A+ M
Sbjct: 178 ETLPSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N +K+ +++LVE +PG +I +A + AV I +Q AG + +
Sbjct: 238 DDTN----LKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRML 293
Query: 294 IGDFLLGCPVI-IGCIV 309
++L G +G +
Sbjct: 294 AANYLSGAQNTLVGKKL 310
>gi|319945036|ref|ZP_08019298.1| methionyl-tRNA formyltransferase [Lautropia mirabilis ATCC 51599]
gi|319741606|gb|EFV94031.1| methionyl-tRNA formyltransferase [Lautropia mirabilis ATCC 51599]
Length = 376
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 136/339 (40%), Positives = 182/339 (53%), Gaps = 33/339 (9%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LRVV+ GT FA L AL+ S H +V+V +QP RPAG RG K + SAV ++A +LP
Sbjct: 35 PLRVVYAGTPVFAAQALDALIGSRHEVVAVLSQPDRPAG-RGQKLLPSAVKQRALAANLP 93
Query: 62 ALVP-----------------------TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRIL 98
L P + +E + DV VV AYGL++PQ +L
Sbjct: 94 VLQPESLRIRPAAADETEERRVRREAANQGAEEALAALRALQPDVMVVAAYGLLLPQSVL 153
Query: 99 NATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPIS 158
+ +LG N HASLLPRWRGAAPIQRAI AGD ETGI IM+M+ LDTGPV VPI
Sbjct: 154 DLPRLGCLNIHASLLPRWRGAAPIQRAIEAGDAETGICIMQMEAGLDTGPVGARHVVPIL 213
Query: 159 SNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRS 218
+ L L+ + A A+V A+D+L L PQ + G+TYA K+ K E +++ RS
Sbjct: 214 ETDTASTLHDRLADVGAQAIVAALDELSAGRLVFEPQAQAGVTYAAKVDKKELGIDWARS 273
Query: 219 AENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEG----KPGEVIN---PNFT 271
A V HIRA P PGA + +++ +SQ++ +G PG ++
Sbjct: 274 AVEVSRHIRAFDP-PGAITWLEGHRDEPPLRVFQSQVLRNDGNATDAPGTIVAAGPDGVD 332
Query: 272 IACSQGAV-RIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+AC QG++ R+ LQRAGGR FL G P+ G
Sbjct: 333 VACGQGSIVRLAALQRAGGRRQPADAFLRGHPLSPGVRF 371
>gi|313888492|ref|ZP_07822159.1| methionyl-tRNA formyltransferase [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845521|gb|EFR32915.1| methionyl-tRNA formyltransferase [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 308
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 96/313 (30%), Positives = 159/313 (50%), Gaps = 12/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ +FMGT +F+V L+ L + + V +Q + G RG K + V KA+E L
Sbjct: 1 MKFIFMGTPDFSVPILERLNTLG-EVALVVSQEDKRKG-RGKKFTKTPVKVKAEELGLEV 58
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + E L D+ +VVAYG ++ Q I++ K N HASLLP RGAAP
Sbjct: 59 YQPADVNSPEAIDKLRHVEADIIIVVAYGQILSQEIIDLPKKYIVNVHASLLPYLRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAIM G ++TG+++MK+++ LD+GPV+ ++++ I L+ +LS + A + E
Sbjct: 119 INRAIMEGHSKTGVSLMKVEEGLDSGPVSAVKEIEIGEMNAGE-LEDKLSHMGADLLEEF 177
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + Q E+ TYA KI K + ++F ++ N+ N IR LSP G +
Sbjct: 178 VLDASKGPVEFIEQDEDKKTYASKILKNDLDLDFNDTSANIVNKIRGLSPHYGVRFKYDD 237
Query: 242 GNKHERIKLLESQLVE--GEGKPGEVIN--PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ K+ +++ +E + + G +I I A+ + +Q G R + I DF
Sbjct: 238 ----KFYKIYKAEELEDKNDLEAGRIIKSDKELIIKTGDWAISVKEIQAPGKRAMGIDDF 293
Query: 298 LLGCPVIIGCIVG 310
L G ++G
Sbjct: 294 LRGNKFQENYVIG 306
>gi|241668599|ref|ZP_04756177.1| methionyl-tRNA formyltransferase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254877133|ref|ZP_05249843.1| methionyl-tRNA formyltransferase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254843154|gb|EET21568.1| methionyl-tRNA formyltransferase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 312
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 111/314 (35%), Positives = 164/314 (52%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L +VF GT + + L+ L S H+I +V TQP R G RG K S V + A + P
Sbjct: 3 KLNIVFAGTPDISAQVLKDLYQSQHNIQAVLTQPDRAKG-RGKKIQFSPVKEVAIANNTP 61
Query: 62 ALVP--TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K + EQ DV VV+AYG+++PQ L+ K G N H SLLP+WRGA
Sbjct: 62 VLQPLSFKKYPQVLEQIRELKPDVIVVIAYGIILPQEFLDIPKYGCLNIHVSLLPKWRGA 121
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD++TGI IM+MD LDTG + +V I + L + + L ++
Sbjct: 122 APIQRAIQAGDSKTGICIMQMDAGLDTGDILNTLEVEIQDTDTSQSLHDKFAKLSIKPLL 181
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E ++ ++ + PQ TYA KI+K E ++F +SA+ + HIRA +P+P A+ +
Sbjct: 182 ETLENID--TIKPQPQQGE-PTYAHKITKQEGLIDFTKSAKEISCHIRAFTPWPSAFFML 238
Query: 240 MIGNKHE-RIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
++LE + ++ F IA + +R +LQ ++L+I D L
Sbjct: 239 GGEQVKVGDFEILEKSSNDEVTAITDITKNGFDIATNDKIIRFKQLQFPNKKMLNIADIL 298
Query: 299 LGCPVI--IGCIVG 310
G + IG +G
Sbjct: 299 NGKDLDKYIGYKIG 312
>gi|282882143|ref|ZP_06290784.1| methionyl-tRNA formyltransferase [Peptoniphilus lacrimalis 315-B]
gi|281298173|gb|EFA90628.1| methionyl-tRNA formyltransferase [Peptoniphilus lacrimalis 315-B]
Length = 306
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 101/313 (32%), Positives = 166/313 (53%), Gaps = 12/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FA+ TL+ L S + V +Q + GR G K + V ++A + +
Sbjct: 1 MKIVFMGTPDFAIPTLEKLNEIS-DVSLVVSQVDKKKGR-GKKLLPPPVKEEAIKLGIEV 58
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + L+ D+ VVVAYG ++ + +L KL N HASLLP RGAAP
Sbjct: 59 FQPENINSPTSIEKLNNIQADIFVVVAYGQILSKEVLQIPKLYCINVHASLLPYLRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAI+ G E+G++IMKM++ LD+G VA + + + N L+ L+ + A + E
Sbjct: 119 INRAIIDGFEESGVSIMKMEEGLDSGDVALQKSL-AIKDKNAHELENALAKMGAELIEEF 177
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L++ + Q + +TYA+KI+K ++F +++E + N IR L P+ GA +
Sbjct: 178 LINLDKGTIQFKEQDHSKMTYAKKITKSTFNIDFSKTSEEILNLIRGLDPYYGARAKYKD 237
Query: 242 GNKHERIKLLESQLVE--GEGKPGEVINPN--FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E IK+ ++ + G +PG +++ N I GA+ + LQ G + +DI F
Sbjct: 238 ----EIIKIFKAYNYDYLGREEPGTILDNNKKLIIKTGDGAISVEELQIPGKKRMDIKSF 293
Query: 298 LLGCPVIIGCIVG 310
LLG +G
Sbjct: 294 LLGHNFDKNERLG 306
>gi|319796455|ref|YP_004158095.1| methionyL-tRNA formyltransferase [Variovorax paradoxus EPS]
gi|315598918|gb|ADU39984.1| methionyl-tRNA formyltransferase [Variovorax paradoxus EPS]
Length = 317
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 107/319 (33%), Positives = 153/319 (47%), Gaps = 18/319 (5%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+V F GT EFA L+A+ ++ H +V V +QP RPAG RG+K S V + A + P
Sbjct: 5 KVAFAGTPEFARVALEAIAAAGHDVVLVLSQPDRPAG-RGMKLQASPVKQFAVANNWPVA 63
Query: 64 VPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
P L + DV VV AYGL++PQ +L+ G N HASLLP
Sbjct: 64 QPRSLRLDGKYPDEAAIGRDALQKAQPDVMVVAAYGLILPQWVLDLPAHGCLNIHASLLP 123
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
RWRGAAPI RAI AGD ETGI IM+MD LDTG + + + + +
Sbjct: 124 RWRGAAPIHRAIEAGDAETGITIMQMDAGLDTGDMLLR---EAVAIGSDNTARLHDRLAE 180
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
+ +L +PQ G+TYA K+ K E +++ + A+ + IRA PFPG
Sbjct: 181 LGGRMIVEALENIGSLTRTPQPAEGVTYANKVEKHEALIDWAQPADAIVRRIRAFDPFPG 240
Query: 235 AWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRV 291
A + + ++ + PG ++ + + +A V + LQR GG+
Sbjct: 241 ANSPL--DGETVKLWTAHAVPASASAAPGTILAVSDASVEVAAGDAGVMLTELQRPGGKR 298
Query: 292 LDIGDFLLGCPVIIGCIVG 310
L + DFL G + G G
Sbjct: 299 LPVADFLRGFDLKPGQAFG 317
>gi|116333603|ref|YP_795130.1| methionyl-tRNA formyltransferase [Lactobacillus brevis ATCC 367]
gi|122269710|sp|Q03RS3|FMT_LACBA RecName: Full=Methionyl-tRNA formyltransferase
gi|116098950|gb|ABJ64099.1| methionyl-tRNA formyltransferase [Lactobacillus brevis ATCC 367]
Length = 314
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 101/313 (32%), Positives = 161/313 (51%), Gaps = 14/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+FMGT +F+ L +L+ + + +++V TQP R G R S V + A + L
Sbjct: 4 VIFMGTPQFSAPILSSLIDNGYDVLAVVTQPDRRVG-RKHVLTASPVKQVAVAHDIEVLQ 62
Query: 65 PTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K+ E + + D+ V A+G +P ++L A K+ N HASLLP++RG AP+
Sbjct: 63 PEKISGSSEMARAIELAPDLIVTAAFGQFLPTKLLKAAKVAAVNVHASLLPKYRGGAPVH 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
AIM GD+ETG++IM M+K +D G V R +PI+ + + +LS L ++E +
Sbjct: 123 YAIMNGDSETGVSIMFMEKKMDAGAVLAQRAIPITDQDDVGTMFAKLSDLGRDLLLETLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
KL L PQ E+ ++++ I E RV+ SA + +RAL PFP A + +
Sbjct: 183 KLLAGELTPVPQDESQVSFSPTIKPEEERVDINLSARMIDCKVRALRPFPTAHIYL---- 238
Query: 244 KHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQ-GAVRIMRLQRAGGRVLDIGDF 297
R KL +++ + +PG V+ + IA + G + + LQ AG L I D+
Sbjct: 239 NGVRTKLWHVTVLDQKTDLQPGAVVSRDKHHLAIATGEQGVLSLDELQPAGKPKLSITDY 298
Query: 298 LLGC--PVIIGCI 308
L G + +G
Sbjct: 299 LNGTTDALTVGEQ 311
>gi|312130988|ref|YP_003998328.1| methionyl-tRNA formyltransferase [Leadbetterella byssophila DSM
17132]
gi|311907534|gb|ADQ17975.1| methionyl-tRNA formyltransferase [Leadbetterella byssophila DSM
17132]
Length = 303
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 98/308 (31%), Positives = 153/308 (49%), Gaps = 17/308 (5%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +FAVATL+AL+ + ++V+V T P +P G RGLK S V K A E LP L P K
Sbjct: 1 MGTPDFAVATLRALIENGQNVVAVVTAPDKPTG-RGLKLSESPVKKYAVEKGLPVLQPEK 59
Query: 68 LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127
L + + L+ VV ++P+ + N +G N H SLLP++RGAAPI AI+
Sbjct: 60 LKNPAFLEELASYKADLQVVVAFRMLPEAVWNMPPMGTINLHGSLLPKYRGAAPINWAII 119
Query: 128 AGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQ 187
G+ TG+ ++K +DTG + + R++ I N L + A +VE + + +
Sbjct: 120 NGEKVTGVTTFFIEKEIDTGKIIYTRELEIGENETAGELHDRMMECGATLVVETVQAISK 179
Query: 188 NNLPLSPQIENGI-TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ P Q A KI K T +N+ +A +HN IR LSP+P AW ++ G +
Sbjct: 180 GDYPQRDQEFTADLPSAPKIFKETTEINWENTAPQLHNFIRGLSPYPAAWT-LLFGKMVK 238
Query: 247 RIKLLESQLVEGEGKPGEVINPN-----------FTIACSQGAVRIMRLQRAGGRVLDIG 295
+ L Q + + P + ++ +QG ++I+ LQ G + +
Sbjct: 239 VFQALPVQELPDQLSP---LEDGNKTWYTDHKKLLYVSTAQGFLQILSLQIEGKKRMGTE 295
Query: 296 DFLLGCPV 303
+FL G
Sbjct: 296 EFLRGYRF 303
>gi|282916465|ref|ZP_06324227.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus D139]
gi|283770277|ref|ZP_06343169.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus H19]
gi|282319905|gb|EFB50253.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus D139]
gi|283460424|gb|EFC07514.1| methionyl-tRNA formyltransferase [Staphylococcus aureus subsp.
aureus H19]
Length = 311
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 108/309 (34%), Positives = 166/309 (53%), Gaps = 14/309 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A ++ L
Sbjct: 1 MT-KIIFMGTPDFSTTVLEMLI-AEHDVIAVVTQPDRPVG-RKRVMTPPPVKKVAMKYDL 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G EE EQ L + D+ V A+G ++P+ +L KLG N HASLLP++RG
Sbjct: 58 PVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N N + +LSVL A +
Sbjct: 118 APIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ + T+A I + + R+++ + V N IR LSP+P A+ M
Sbjct: 178 ETLPSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N +K+ +++LVE +PG +I +A + AV I +Q AG + +
Sbjct: 238 DDIN----LKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRML 293
Query: 294 IGDFLLGCP 302
++L G
Sbjct: 294 AANYLSGAQ 302
>gi|300214409|gb|ADJ78825.1| Methionyl-tRNA formyltransferase [Lactobacillus salivarius CECT
5713]
Length = 318
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 97/318 (30%), Positives = 167/318 (52%), Gaps = 14/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +VFMGT FA L+ ++ + ++I++V TQP RP G R S V + A ++ +
Sbjct: 1 MT-NIVFMGTPAFAAPILEGIIENGYNILAVVTQPDRPVG-RKRVLHASPVKEVALKYGI 58
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K G +E ++ + D+ V AYG +P +++ + K+ N H SLLP++RG
Sbjct: 59 KVFQPVKLSGSDEMQEIIDLQPDLIVTAAYGQFLPTKLIESAKIAAINVHGSLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+Q +IM GD++TG+ I+ M K +D G + ++ I S +T + +++S+L ++
Sbjct: 119 APVQYSIMNGDDKTGVTIIYMVKKMDAGDMLAQAELKIESTDDTGTIFEKMSILGRDVLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + K+ N+ Q EN + ++ I E ++ A+ + RAL P PGA+ +
Sbjct: 179 ETLPKIISGNVEAVKQDENKVVFSPNIKPEEEILHLNLEAKEIDWKTRALRPAPGAYFK- 237
Query: 240 MIGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVR-IMRLQRAGGRVLD 293
K +R KL + +E + + PG V+ ++ G V I+ LQ AG + +D
Sbjct: 238 --NFKGKRTKLWSIKPLEEKTEFAPGYVVNVDKHELKVSAYNGTVYSIIELQPAGKQKMD 295
Query: 294 IGDFLL--GCPVIIGCIV 309
I +L G + IG +
Sbjct: 296 ITSYLNGVGQGLKIGQRI 313
>gi|237785572|ref|YP_002906277.1| methionyl-tRNA formyltransferase [Corynebacterium kroppenstedtii
DSM 44385]
gi|237758484|gb|ACR17734.1| Methionyl-tRNA formyltransferase [Corynebacterium kroppenstedtii
DSM 44385]
Length = 345
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 101/316 (31%), Positives = 163/316 (51%), Gaps = 17/316 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP- 61
+RVVF GT A LQAL+ S H +V+V T+P P G RG + S V + A+ +P
Sbjct: 1 MRVVFAGTPTPAATALQALLDSHHDVVAVLTRPDAPRG-RGRRLYPSPVAELAEAHDIPA 59
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
T + + + D VVAYG ++P +L + G+ N H SLLPRWRGAAP
Sbjct: 60 IKTSTLKDESVIDSLAEYKPDCIPVVAYGALVPPNVLTLPRWGWVNLHFSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRAI AGD ETG+ + ++++ LDTG + I + L + L+ A +V+
Sbjct: 120 VQRAIEAGDKETGVTVFRIEEGLDTGDIFASAPADIRDDDTAGSLMERLTDQGAQVLVDT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D +E + +PQ ++G TYA+KIS +TR+++ + A V IRA++P PGAW +
Sbjct: 180 LDAIENGSATPTPQSDDGATYAKKISTEDTRIDWNKPASAVDQAIRAVTPDPGAWTLLED 239
Query: 242 GNKHERIKLLESQLVEG---------EGKPGEV--INPNFTIACSQGAVRIMRLQRAGGR 290
RI++ + + PGE+ + + V++ +Q G +
Sbjct: 240 D----RIRIGAVRPITDPRDPIEKSLSLAPGEIAWKKNRAWVGTADYPVQLGSVQAPGKK 295
Query: 291 VLDIGDFLLGCPVIIG 306
+++ G ++ G + G
Sbjct: 296 MMEAGAWVRGAHLANG 311
>gi|47093060|ref|ZP_00230838.1| methionyl-tRNA formyltransferase [Listeria monocytogenes str. 4b
H7858]
gi|47018561|gb|EAL09316.1| methionyl-tRNA formyltransferase [Listeria monocytogenes str. 4b
H7858]
gi|328466175|gb|EGF37332.1| methionyl-tRNA formyltransferase [Listeria monocytogenes 1816]
Length = 316
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 99/318 (31%), Positives = 160/318 (50%), Gaps = 11/318 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L L +S++ +V+V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPEFSVPVLAQL-ASTYDVVAVVTQPDRPVG-RKRVLTPPPVKKAALELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E E+ ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSKLGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ +T+A IS+ + ++++ + + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITAIPQDPEKVTFARNISREQEKIDWTKPGRTIFNQIRGLSPWPVAYTTL 237
Query: 240 --MIGNKHERIKLLESQLVEGEGKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDI 294
E + + +G+PG ++ I G + + +Q AG +D+
Sbjct: 238 EEKPFKIWEATYEETYEETKEDGEPGAILADKTTLKIVAGDGTLIVPTVIQPAGKPKMDV 297
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 298 HSFMTGAGRNLSKSTRFG 315
>gi|148269535|ref|YP_001243995.1| methionyl-tRNA formyltransferase [Thermotoga petrophila RKU-1]
gi|166215525|sp|A5IJP6|FMT_THEP1 RecName: Full=Methionyl-tRNA formyltransferase
gi|147735079|gb|ABQ46419.1| methionyl-tRNA formyltransferase [Thermotoga petrophila RKU-1]
Length = 313
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 101/312 (32%), Positives = 162/312 (51%), Gaps = 10/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF+GT EFA L+ L+ + ++V V TQP +P G RG K + V A++ +P
Sbjct: 1 MRIVFVGTPEFAAEILEHLIKNGFNVVGVVTQPDKPRG-RGRKVEPTPVKVVAEKHRVPF 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P + ++E E S DV +V +YG ++ +++L+ LG YN H SLLP++RGA+P
Sbjct: 60 IQPESINKKEALEFLRSVGPDVIIVASYGKILGEKVLSLPSLGCYNIHPSLLPKYRGASP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQR + G+ TG+ I KM + LD GP+A R++ I L++ L L +E
Sbjct: 120 IQRVLENGEERTGVTIYKMVRELDAGPIALQREISIDPFETFDQLEKRLIELSKEMSIEF 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++KL+ ++ L Q + TYA I K + V+F + AE+V N IRA PGA +
Sbjct: 180 LEKLKVGDIELKEQDHSRATYAPMIKKEDLIVDFSKDAESVKNKIRAYDSRPGARAFLGN 239
Query: 242 GNKHERIKLLESQLVEGEG-KPGE---VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+KL ++ G +PG + I +G V++ +Q G R + +
Sbjct: 240 DE----VKLFGVTAIDSSGDEPGLINYINKEGAWIGTGRGKVKVGCIQFPGKRKMTFWEA 295
Query: 298 LLGCPVIIGCIV 309
G +I G
Sbjct: 296 KNGRLIIEGMRF 307
>gi|330837392|ref|YP_004412033.1| Methionyl-tRNA formyltransferase [Spirochaeta coccoides DSM 17374]
gi|329749295|gb|AEC02651.1| Methionyl-tRNA formyltransferase [Spirochaeta coccoides DSM 17374]
Length = 349
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 95/324 (29%), Positives = 141/324 (43%), Gaps = 20/324 (6%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R++F GT AV L+AL ++S +V+V T P RP G R V S V + A LP L
Sbjct: 28 RILFAGTPAIAVPVLEAL-AASFPVVAVLTNPDRP-GARSRTLVPSPVKEAAATLGLPVL 85
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P L E + S++ D+ V AYG + R L+ G N H S LP RG++PIQ
Sbjct: 86 QPESLRTEARDIVSSYHPDMLVCFAYGKLFGPRFLSLFSQGAINIHPSRLPMGRGSSPIQ 145
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
I++GD E I+I ++ +D+G + P+ T L +++ A V +
Sbjct: 146 YTILSGDAEAAISIQRIAAQMDSGDILAQDVFPLDGTETTGTLTDIVALRAAPLAVSIVS 205
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ PQ I+K E +++ S ++H IRA P+P AW
Sbjct: 206 DVSTGKTVSRPQSGEATY-THLITKDEALLDWSWSIRDIHCCIRAFHPWPKAWTTYEGTP 264
Query: 244 KHERI---KLLESQL----------VEGEGKPGEVIN----PNFTIACSQGAVRIMRLQR 286
L E++ V PG V+ IAC G + I RLQ
Sbjct: 265 LCITSVADSLQEAEKGVFDSVVSPGVPSGVLPGTVMEGRKGKGIAIACGNGIIWIDRLQL 324
Query: 287 AGGRVLDIGDFLLGCPVIIGCIVG 310
+G + + DF+ G IG +G
Sbjct: 325 SGRKEMAWQDFINGNSRFIGSHLG 348
>gi|218437878|ref|YP_002376207.1| methionyl-tRNA formyltransferase [Cyanothece sp. PCC 7424]
gi|226704293|sp|B7KHD0|FMT_CYAP7 RecName: Full=Methionyl-tRNA formyltransferase
gi|218170606|gb|ACK69339.1| methionyl-tRNA formyltransferase [Cyanothece sp. PCC 7424]
Length = 334
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 102/332 (30%), Positives = 159/332 (47%), Gaps = 26/332 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++VVF GT +FAV +L+ L+ S +V+V TQP +P G RG + + S + K A + +P
Sbjct: 1 MKVVFFGTPQFAVPSLERLLEHSDIDVVAVVTQPDKPRG-RGKQLIPSPIKKVALDHQIP 59
Query: 62 ALVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ + + NAD VVAYG ++ IL KL N H S+LP++RGA
Sbjct: 60 IWQPKRVKKNAQTLTKLRETNADAFAVVAYGQILSAEILQMPKLACINVHGSILPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ +I G+ +TGI M MD+ +DTG + PI N + L+ A ++
Sbjct: 120 APIQWSIYHGETQTGITTMLMDEGMDTGAMLLKAYTPIQLLDNADKIATTLANQGADLLI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA---- 235
E + KLEQ L Q TYA I K + +N+ R A +HN +R P
Sbjct: 180 ETLLKLEQGELNPESQNSELATYAPLIQKEDYLINWTRHALQIHNQVRGFYPNCFTTFRE 239
Query: 236 --------------WLEMMIGNKHERIKLLESQLVEGEGKPGEVIN--PNF--TIACSQG 277
+ E + N ++I+ + L PGEV+N N + +G
Sbjct: 240 QPLKILATAPLGEAYWEHLPSNIAQKIQPQWTTLSSLTSSPGEVVNLIKNLGPIVQTGEG 299
Query: 278 AVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ ++++Q +G R DF+ G + +G
Sbjct: 300 LLLLLQVQLSGKRPQSGWDFVNGTRLSVGEKF 331
>gi|315444644|ref|YP_004077523.1| methionyl-tRNA formyltransferase [Mycobacterium sp. Spyr1]
gi|315262947|gb|ADT99688.1| methionyl-tRNA formyltransferase [Mycobacterium sp. Spyr1]
Length = 310
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 96/307 (31%), Positives = 150/307 (48%), Gaps = 12/307 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+ +LQ L+ S H +++V T+P AGRRG S V + A +P
Sbjct: 1 MRLVFAGTPEPALPSLQRLIDSARHDVIAVLTRPDAAAGRRGR-PSPSPVAELAAAHGIP 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + EE+ L+ D VVAYG ++ + +L G+ N H S+LP WRGAA
Sbjct: 60 VLKPPRPNSEEFVAELAALAPDCCAVVAYGALLREELLAVPAHGWVNLHFSVLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A+ AGD TG +++ LD+GPV + I L L+ A +
Sbjct: 120 PVQAALAAGDEVTGATTFQIELSLDSGPVYGVVTETIRPTDTAGDLLGRLADSGAGLLEA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ G++ A K+S + R+ + A V IR+++P PGAW
Sbjct: 180 TMDGIEDGTLTAVPQPAEGVSIAPKVSVDDARIRWELPAHVVDRQIRSVTPNPGAWT--- 236
Query: 241 IGNKHERIKLLESQLVE---GEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ RIK+ + + +PGE+ + + + AV + +Q G + ++
Sbjct: 237 -MSGELRIKVGPVTVPDDGPKGLEPGEIRVDKKHVHVGTATDAVLLGTVQPPGKKPMNAA 295
Query: 296 DFLLGCP 302
D+ G
Sbjct: 296 DWARGAR 302
>gi|291557815|emb|CBL34932.1| methionyl-tRNA formyltransferase [Eubacterium siraeum V10Sc8a]
Length = 306
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 99/311 (31%), Positives = 163/311 (52%), Gaps = 15/311 (4%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +FAV+ L+ L H++++V+TQP +P RG K V + A+++ +P P
Sbjct: 1 MGTPDFAVSALEELHK-HHNVMAVFTQPDKPK-NRGKKMQAPPVKECAEKYGIPVYQPLS 58
Query: 68 LGQEEYEQF-----LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L + E + D VV AYG ++P+ IL K N HASLLP++RGAAPI
Sbjct: 59 LRKGEDAEKSLELLKQLAPDCIVVAAYGQLLPESILELPKYKCINIHASLLPKYRGAAPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q+ I+ G+ E+G+ M M K LDTG + R V I+ ++ L L+ ++E +
Sbjct: 119 QKCIIDGETESGVTTMLMAKGLDTGDMLMSRSVKITPDMTGGELHDSLAATGGELIIETL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
E+ + PQ ++ YA ISK R++F ++A +V+N IR +SP P A+ +
Sbjct: 179 KACEEGTIKPVPQDDSLSCYAGMISKEMCRIDFSKNAIDVYNFIRGMSPSPCAYTFIGD- 237
Query: 243 NKHERIKLLESQLVE-GEGKP-GEVIN-PNFTIACSQG-AVRIMRLQRAGGRVLDIGDFL 298
+R+K+ + + + KP G V+N + T+ C +R +Q GG+ ++ FL
Sbjct: 238 ---KRLKVYFAVMTDITSDKPCGTVVNENDLTVVCGDKKCIRFTDVQGEGGKRMNTASFL 294
Query: 299 LGCPVIIGCIV 309
G + ++
Sbjct: 295 NGNKLQRDAVL 305
>gi|313891926|ref|ZP_07825527.1| methionyl-tRNA formyltransferase [Dialister microaerophilus UPII
345-E]
gi|329120995|ref|ZP_08249626.1| methionyl-tRNA formyltransferase [Dialister micraerophilus DSM
19965]
gi|313119569|gb|EFR42760.1| methionyl-tRNA formyltransferase [Dialister microaerophilus UPII
345-E]
gi|327471157|gb|EGF16611.1| methionyl-tRNA formyltransferase [Dialister micraerophilus DSM
19965]
Length = 315
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 106/315 (33%), Positives = 173/315 (54%), Gaps = 12/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++FMGT EFA +L+ L + ++ ++V+T+P + GR G K S V + E ++P
Sbjct: 4 KYKIIFMGTPEFAKQSLEMLCKNEYTPIAVFTKPDKINGRNG-KITFSPVKLYSLEQNIP 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
PT + +Y+ + D+ VV+AYG ++P+ IL K G N HASLLP++RGAA
Sbjct: 63 IHQPTTLKDESQYKLISEYKPDIIVVIAYGKILPENILRIPKYGAINVHASLLPKYRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI+ G+ +TGI IMK+DK +DTG + +++PIS L + L+ ++ +V+
Sbjct: 123 PIQRAIINGETKTGITIMKLDKGMDTGDIISQKEIPISQESTAENLFEILAKEGSYELVK 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ LE+ Q E TYAEKI+K +N+ A +HN IR + P PG +
Sbjct: 183 VLNDLERKLSESIAQNEREATYAEKITKSSGHINWNLPANTIHNLIRGMYPNPGTYTFF- 241
Query: 241 IGNKHERIKLLES--QLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +RIKL +S + V+ + P G +I + ++ +G + I LQ + +
Sbjct: 242 ---RKKRIKLHKSNYKNVDNKNIPSGTIISLKDDIIHVSTGKGVLEIYALQPENHKCMSS 298
Query: 295 GDFLLGCPVIIGCIV 309
DF+ G + I
Sbjct: 299 RDFINGYQIKINEKF 313
>gi|298252700|ref|ZP_06976494.1| methionyl-tRNA formyltransferase [Gardnerella vaginalis 5-1]
gi|297533064|gb|EFH71948.1| methionyl-tRNA formyltransferase [Gardnerella vaginalis 5-1]
Length = 327
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 94/323 (29%), Positives = 156/323 (48%), Gaps = 19/323 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALVS--SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M L ++F GT E AV +L+ L + +V T+P P G RG K V S V + A E
Sbjct: 1 MALPILFAGTPEVAVPSLRELTKDSEHFDVRAVLTRPDAPTG-RGRKLVPSPVKQAALEL 59
Query: 59 SLPALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L ++ + + + A A VVAYG ++ Q +L+A LG+YN H SLLP+WR
Sbjct: 60 GLPVLESDPKNEDVFLEQLAATGAKAAAVVAYGKILRQNVLDALPLGWYNLHFSLLPQWR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAP+QRAI AGD+ TG + ++ + +D GP+ I S+ N+ L L+ A
Sbjct: 120 GAAPVQRAIWAGDDITGATVFRITRGMDCGPILAQFTTKIESHENSGDLLARLANDGAPL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ ++ +E + Q + A+KI+ + ++F A V IRA +P PGAW
Sbjct: 180 LAASLRGMETGEIVPVEQDQTPQEVAQKITVEDAHIDFHAPAFAVDRQIRACTPNPGAWC 239
Query: 238 EMMIGNKH----ERIKLLESQLVEGEGK---------PGEVI--NPNFTIACSQGAVRIM 282
E+ ++H + +L + + PG+++ + G + ++
Sbjct: 240 ELHADDEHNADPITLHVLRAVPADANDPHGEELMKLDPGKLLAGKKQVWVGTLSGVLELL 299
Query: 283 RLQRAGGRVLDIGDFLLGCPVII 305
++ G + + D+ G +
Sbjct: 300 EVKAQGKKAMKAADWARGARLSA 322
>gi|237802959|ref|YP_002888153.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis
B/Jali20/OT]
gi|237804881|ref|YP_002889035.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis
B/TZ1A828/OT]
gi|231273181|emb|CAX10094.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis
B/TZ1A828/OT]
gi|231274193|emb|CAX10987.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis
B/Jali20/OT]
Length = 316
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 106/308 (34%), Positives = 168/308 (54%), Gaps = 9/308 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+LRVV++GT +FA L+ L+ + IV + T+ +P +R K + S V + A ++
Sbjct: 1 MSLRVVYLGTPQFAATVLKTLLDAHTHIVGIVTRADKPQ-KRSSKLISSPVKQLALSKNI 59
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P K + Q + ADV +VVAYG+++ Q +L+ G YN HA LLP +RGA
Sbjct: 60 PLLQPIKTTDPAFLAQLREWQADVFIVVAYGVILKQELLDIPTYGCYNLHAGLLPAYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQR IM G +G +++MD +DTG +A + V I ++ GL + L+ ++
Sbjct: 120 APIQRCIMDGGVLSGNTVIRMDAGMDTGDIANVNYVAIGEDMTAGGLAEALAASGGELLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++E + PQ E T A K++K E +++ A V+ HIR +SP PGAW
Sbjct: 180 KTLQEIEAGTVRHVPQNEAMATLAPKLTKEEGGIHWDAPASQVYAHIRGVSPAPGAWTRY 239
Query: 240 MIGNKH-ERIKLLESQLVEGEGK---PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+ K R+ +L +++ G PGEV+ + IAC QGA+R+ +Q G ++
Sbjct: 240 LSQGKEARRLGVLSARMESFSGNYGDPGEVLGVSGEDLLIACRQGALRLRMVQPEGKALM 299
Query: 293 DIGDFLLG 300
DF G
Sbjct: 300 KAKDFFNG 307
>gi|33591755|ref|NP_879399.1| methionyl-tRNA formyltransferase [Bordetella pertussis Tohama I]
gi|39931241|sp|Q7VS89|FMT_BORPE RecName: Full=Methionyl-tRNA formyltransferase
gi|33571398|emb|CAE44879.1| methionyl-tRNA formyltransferase [Bordetella pertussis Tohama I]
gi|332381172|gb|AEE66019.1| methionyl-tRNA formyltransferase [Bordetella pertussis CS]
Length = 312
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 119/312 (38%), Positives = 165/312 (52%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L AL+++ H + V TQP RPAG RGLK S V + A +
Sbjct: 1 MRLVFAGTPEFARIALDALLAAGHDVPLVLTQPDRPAG-RGLKLTPSPVKQAALAAGIEV 59
Query: 63 LVPTKLGQEEYEQFLS---------FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P L + + DV VV AYGL++PQ L+ +LG N HASLL
Sbjct: 60 AQPRSLRLDGRYPDEAAAARAQLERVAPDVMVVAAYGLILPQWTLDLPRLGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPIQRAI AGD ETG+ IM+MD LDTG + R VPI + A L EL+ +
Sbjct: 120 PRWRGAAPIQRAIEAGDAETGVTIMQMDAGLDTGDMLLERAVPIGAQQTAAQLHDELARV 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+V+A+ L Q L Q + G+TYA K+ K E ++ A + +RA +P P
Sbjct: 180 GGQAIVDALAALAQGGLAPRRQPDAGVTYAAKLYKAEAALDCSLPAAVLARRVRAFNPVP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGR 290
GA + + + ++ ++ G G V+ IA QG +R++ LQ+AGG+
Sbjct: 240 GATIRLPGLDDPVKVWRAQALEQAAGGTSGAVLRADAQGIDIATGQGVLRLLELQKAGGK 299
Query: 291 VLDIGDFLLGCP 302
+ F+ G
Sbjct: 300 RQPVDVFVRGWQ 311
>gi|227549210|ref|ZP_03979259.1| methionyl-tRNA formyltransferase [Corynebacterium lipophiloflavum
DSM 44291]
gi|227078664|gb|EEI16627.1| methionyl-tRNA formyltransferase [Corynebacterium lipophiloflavum
DSM 44291]
Length = 307
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 105/309 (33%), Positives = 147/309 (47%), Gaps = 11/309 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT E AV L L++S H + SV T+P G RG S V + AQ +
Sbjct: 1 MRLVFAGTPEPAVVALSKLIASEHEVSSVITRPDARKG-RGRSLHPSPVKELAQHHGIEV 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P L E + + VVAYG +IP +L G+ N H SLLP WRGAA
Sbjct: 60 LTPQTLKDNEEIRQVLREIAPEAVPVVAYGNLIPADMLEIPTHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI GD +TG ++D LDTG + PI + L L+ A +VE
Sbjct: 120 PVQAAIRNGDADTGATTFRIDTGLDTGDILGHIHEPIHATDTADDLLTRLAFAGADLLVE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
M L + Q + TYA KI+ + R+++ AE V IRA +P PGAW +
Sbjct: 180 TMTGLADGTITPVAQP-SEGTYARKITSADARIDWSEPAEVVDRAIRAHTPAPGAWTTLG 238
Query: 241 IGNKHERIKLLESQL-VEGEGKPGEV-INPNFT-IACSQGAVRIMRLQRAGGRVLDIGDF 297
ER+KL EG+ +PGEV ++ + S V + R+Q G +++ D+
Sbjct: 239 G----ERVKLERITPAAEGDLRPGEVRVSKEVVEVGTSSANVELTRIQPPGKKMMAAADW 294
Query: 298 LLGCPVIIG 306
G G
Sbjct: 295 ARGLKSTEG 303
>gi|283783359|ref|YP_003374113.1| methionyl-tRNA formyltransferase [Gardnerella vaginalis 409-05]
gi|283441801|gb|ADB14267.1| methionyl-tRNA formyltransferase [Gardnerella vaginalis 409-05]
Length = 327
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 94/323 (29%), Positives = 156/323 (48%), Gaps = 19/323 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALVS--SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M L ++F GT E AV +L+ L + +V T+P P G RG K V S V + A E
Sbjct: 1 MALPILFAGTPEVAVPSLRELTKDSEHFDVRAVLTRPDAPTG-RGRKLVPSPVKQAALEL 59
Query: 59 SLPALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L ++ + + + A A VVAYG ++ Q +L+A LG+YN H SLLP+WR
Sbjct: 60 GLPVLESDPKNEDVFLEQLAATGAKAAAVVAYGKILRQNVLDALPLGWYNLHFSLLPQWR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAP+QRAI AGD+ TG + ++ + +D GP+ I S+ N+ L L+ A
Sbjct: 120 GAAPVQRAIWAGDDITGATVFRITRGMDCGPILAQFTTKIESHENSGDLLARLANDGAPL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ ++ +E + Q + A+KI+ + ++F A V IRA +P PGAW
Sbjct: 180 LAASLRGMETGEIVPVEQDQTPQEVAQKITVEDAHIDFHVPAFAVDRQIRACTPNPGAWC 239
Query: 238 EMMIGNKH----ERIKLLESQLVEGEGK---------PGEVI--NPNFTIACSQGAVRIM 282
E+ ++H + +L + + PG+++ + G + ++
Sbjct: 240 ELHADDEHNADPITLHVLRAVPADANDPHGEELMKLDPGKLLAGKKQVWVGTLSGVLELL 299
Query: 283 RLQRAGGRVLDIGDFLLGCPVII 305
++ G + + D+ G +
Sbjct: 300 EVKAQGKKAMKAADWARGARLSA 322
>gi|313894884|ref|ZP_07828444.1| methionyl-tRNA formyltransferase [Selenomonas sp. oral taxon 137
str. F0430]
gi|312976565|gb|EFR42020.1| methionyl-tRNA formyltransferase [Selenomonas sp. oral taxon 137
str. F0430]
Length = 316
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 100/317 (31%), Positives = 139/317 (43%), Gaps = 12/317 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSH--SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M+ +RVVFMGT +FAV AL + +V+V TQP RP G RG K + S V A E
Sbjct: 1 MSAMRVVFMGTPDFAVPIAAALAARPDLTEVVAVVTQPDRPRG-RGKKVLASPVKAWALE 59
Query: 58 FSLPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+P L P + E+ + DVAVV A+G ++PQ +L+ G N HASLLPRW
Sbjct: 60 NRIPVLQPVRARDAVFIEEMRALRPDVAVVAAFGQILPQELLDIPAHGCINVHASLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQ A+MAGD +GI M+MD LDTG + R VPI+ + L L + A
Sbjct: 120 RGAAPIQHAVMAGDAVSGITTMQMDAGLDTGDMLLRRAVPITPDTTYGTLHDALMEMGAA 179
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+VE M++L L +PQ S P +
Sbjct: 180 LIVETMEQLAAGRLVRTPQTGESCY---APRITRETAQIDWSRPARQLDALVRGLNPVPY 236
Query: 237 LEMMIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVL 292
+I L PG ++ +A V + +Q G +++
Sbjct: 237 AVTSHAGAVYKIGRLHGTGRPASAVPGTIVSADPKGGLIVAAGDEDVAVTEMQAPGKKMI 296
Query: 293 DIGDFLLGCPVIIGCIV 309
+ +L G I
Sbjct: 297 EAAAYLRGHRFEINTRF 313
>gi|254282688|ref|ZP_04957656.1| methionyl-tRNA formyltransferase [gamma proteobacterium NOR51-B]
gi|219678891|gb|EED35240.1| methionyl-tRNA formyltransferase [gamma proteobacterium NOR51-B]
Length = 318
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 118/317 (37%), Positives = 168/317 (52%), Gaps = 13/317 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR++F GT +FA + L LV S HS+V+V TQP RP+G RG K + V + A + L
Sbjct: 4 PLRLLFAGTPDFAASHLAQLVGSQHSVVAVLTQPDRPSG-RGKKVKATPVKQCALDAGLT 62
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P +E ++ AD +VVAYGL++PQ +L+ + G N H SLLPRWRGAA
Sbjct: 63 VLQPATLKSKEVQATIAAYGADAMIVVAYGLILPQAVLDLPRYGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETGI IM+M+ LDTGP+ PIS + T L L+ + +
Sbjct: 123 PIQRAIEAGDTETGITIMQMEAGLDTGPMLATATTPISEDDTTIELYSRLAAMGPKLLTG 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D L + + Q ++ TYA KISK E +++ + A + I A P PG + E++
Sbjct: 183 VLDDLPAHLSSATVQNDDLATYASKISKAEGHISWQQPARTIARRIHAFLPAPGCYSELL 242
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
R+K + + PG ++ N F IAC G +R+ + Q GG+ L +
Sbjct: 243 GH----RVKFWRATALSATPTATPGTIVAIDNKTFDIACGDGLLRVEQAQLPGGKPLAVT 298
Query: 296 DFLLGCP--VIIGCIVG 310
D L G + G
Sbjct: 299 DLLNARSDIFHAGVVFG 315
>gi|161610403|ref|NP_882603.2| methionyl-tRNA formyltransferase [Bordetella parapertussis 12822]
gi|39931246|sp|Q7W1V2|FMT_BORPA RecName: Full=Methionyl-tRNA formyltransferase
Length = 312
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 120/312 (38%), Positives = 166/312 (53%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L AL+++ H + V TQP RPAG RGLK S V + A +
Sbjct: 1 MRLVFAGTPEFARIALDALLAAGHDVPLVLTQPDRPAG-RGLKLTPSPVKQAALAAGIGV 59
Query: 63 LVPTKLGQEEYEQFLS---------FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P L + + DV VV AYGL++PQ L+ +LG N HASLL
Sbjct: 60 AQPRSLRLDGRYPDEAAAARAQLERVAPDVMVVAAYGLILPQWTLDLPRLGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPIQRAI AGD ETG+ IM+MD LDTG + R VPI + A L EL++
Sbjct: 120 PRWRGAAPIQRAIEAGDAETGVTIMQMDAGLDTGDMLLERAVPIGAQQTAAQLHDELALA 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+V+A+ L Q L Q + G+TYA K+ K E ++ A + +RA +P P
Sbjct: 180 GGQAIVDALAALGQGGLAPRRQPDAGVTYAAKLDKAEAALDCSLPAAVLARRVRAFNPVP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGR 290
GA + + + ++ ++ G PG V+ IA QG +R++ LQ+AGG+
Sbjct: 240 GATIRLPGLDDPVKVWRAQALEQAAGGPPGAVLRADAQGIDIATGQGVLRLLELQKAGGK 299
Query: 291 VLDIGDFLLGCP 302
+ F+ G
Sbjct: 300 RQPVDVFVRGWQ 311
>gi|90961591|ref|YP_535507.1| methionyl-tRNA formyltransferase [Lactobacillus salivarius UCC118]
gi|301299269|ref|ZP_07205555.1| methionyl-tRNA formyltransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|122993077|sp|Q1WUB1|FMT_LACS1 RecName: Full=Methionyl-tRNA formyltransferase
gi|90820785|gb|ABD99424.1| Methionyl-tRNA formyltransferase [Lactobacillus salivarius UCC118]
gi|300853113|gb|EFK80711.1| methionyl-tRNA formyltransferase [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 318
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 96/318 (30%), Positives = 167/318 (52%), Gaps = 14/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +VFMGT FA L+ ++ + +++++V TQP RP G R S V + A ++ +
Sbjct: 1 MT-NIVFMGTPAFAAPILEGIIENGYNVLAVVTQPDRPVG-RKRVLHASPVKEVALKYGI 58
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K G +E ++ + D+ V AYG +P +++ + K+ N H SLLP++RG
Sbjct: 59 KVFQPVKLSGSDEMQEIIDLQPDLIVTAAYGQFLPTKLIESVKIAAINVHGSLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+Q +IM GD++TG+ I+ M K +D G + ++ I S +T + +++S+L ++
Sbjct: 119 APVQYSIMNGDDKTGVTIIYMVKKMDAGDMLAQAELKIESTDDTGTIFEKMSILGRDVLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + K+ N+ Q EN + ++ I E ++ A+ + RAL P PGA+ +
Sbjct: 179 ETLPKIISGNVEAVKQDENKVVFSPNIKPEEEILHLNLEAKEIDWKTRALRPAPGAYFK- 237
Query: 240 MIGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVR-IMRLQRAGGRVLD 293
K +R KL + +E + + PG V+ ++ G V I+ LQ AG + +D
Sbjct: 238 --NFKGKRTKLWSIKPLEEKTEFAPGYVVNVDKHELKVSAYNGTVYSIIELQPAGKQKMD 295
Query: 294 IGDFLL--GCPVIIGCIV 309
I +L G + IG +
Sbjct: 296 ITSYLNGVGQGLKIGQRI 313
>gi|295675126|ref|YP_003603650.1| methionyl-tRNA formyltransferase [Burkholderia sp. CCGE1002]
gi|295434969|gb|ADG14139.1| methionyl-tRNA formyltransferase [Burkholderia sp. CCGE1002]
Length = 331
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 128/323 (39%), Positives = 180/323 (55%), Gaps = 16/323 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + ++ V TQP RPAG RG+K S V + AQE L
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHRAGFAVPLVLTQPDRPAG-RGMKLQASPVKRYAQEHGLA 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
PT L + + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPTSLRRAGKYPEEAAAGIEQLRATPHDVMVVAAYGLILPQEVLDIPRFGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD +TGI +M+MD LDTG + + PIS++ TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAQTGITLMQMDAGLDTGAMISEVRTPISADDTTATLHDRLAE 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V A+ +LE++ +PQ +G+TYAEKI+K E +++ R AE + +RA P
Sbjct: 183 AGAQLIVHALIELERSGKLASTPQPADGVTYAEKIAKHEAALDWRRPAEALARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLE-SQLVEGEGK-PGEVIN---PNFTIACSQGAVRIMRLQR 286
FPG + GN + + G K PG + +AC +GA+R+ +LQ+
Sbjct: 243 FPGGAGTLDDGNTVKIWAATAVASPASGSSKTPGTITEVSPDGVLVACDEGALRLTQLQK 302
Query: 287 AGGRVLDIGDFLLGCPVIIGCIV 309
GG+ L + +FL G P++ G
Sbjct: 303 PGGKRLPVREFLAGSPLVAGQRF 325
>gi|317401263|gb|EFV81904.1| methionyl-tRNA formyltransferase [Achromobacter xylosoxidans C54]
Length = 313
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 118/312 (37%), Positives = 163/312 (52%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA AL ++ H I V TQP RPAG RGLK S V + A + +
Sbjct: 1 MRLVFAGTPEFARIAFDALRAAGHDIPLVMTQPDRPAG-RGLKLTPSPVKQAALDAGIEV 59
Query: 63 LVPTKLGQEEYEQFLSFN---------ADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P L + + DV VV AYGL++PQ +L+ +LG N HASLL
Sbjct: 60 AQPRSLRLDGRYPDEAAEARALLERVAPDVMVVAAYGLILPQWVLDLPRLGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPIQRAI AGD+ TG+ IM+MD LDTG + R VPI ++ N A L L++
Sbjct: 120 PRWRGAAPIQRAIEAGDDRTGVTIMQMDAGLDTGDMLLERIVPIGADTNAAQLHDALALA 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+V A+ L Q L Q E G+TYA K+ K E ++ + A + +RA +P P
Sbjct: 180 GGEAIVAALAALAQGGLAPRKQSEEGVTYAAKLDKAEAALDCSQPAALLARRVRAFNPVP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGR 290
GA + + ++ E+ P V+ IA G +R++ LQ+AGG+
Sbjct: 240 GASIRLPGLVDPVKVWRAEAVAQAVTAAPASVLRTAADGIDIATGDGVLRLLELQKAGGK 299
Query: 291 VLDIGDFLLGCP 302
+ F+ G
Sbjct: 300 RQPVDVFVRGWQ 311
>gi|134098683|ref|YP_001104344.1| methionyl-tRNA formyltransferase [Saccharopolyspora erythraea NRRL
2338]
gi|291003630|ref|ZP_06561603.1| methionyl-tRNA formyltransferase [Saccharopolyspora erythraea NRRL
2338]
gi|166215507|sp|A4FBJ4|FMT_SACEN RecName: Full=Methionyl-tRNA formyltransferase
gi|133911306|emb|CAM01419.1| methionyl-tRNA formyltransferase [Saccharopolyspora erythraea NRRL
2338]
Length = 309
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 101/313 (32%), Positives = 155/313 (49%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E AV +L+AL+ S +H + +V T+P PAG RG K + S V A E +
Sbjct: 1 MRLVFAGTPEPAVPSLRALIESANHEVAAVVTRPDAPAG-RGRKLMRSPVGALADEHGIE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K E+ + + VVAYG ++ Q L+ + G+ N H SLLP WRGAA
Sbjct: 60 VLTPAKASDPEFLARLRELEPECCPVVAYGALLRQTALDIPEHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI GD TG + ++ LD GPV + + + L + LSV A +V
Sbjct: 120 PVQAAIKHGDQITGASTFRLVPELDAGPVYGVVTEEVRDTDTSGVLLERLSVSGAKLLVA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + L Q +G++YA K+ + RV+F A V +R+++P PGAW
Sbjct: 180 TLDGIADGTLRAEEQPADGVSYAPKVEVEDARVDFTAPARAVDRLVRSVTPDPGAWASFR 239
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVINPNFTIACSQGA--VRIMRLQRAGGRVLDIGD 296
ER+KL +V+ + PGE+ + G+ V + +Q G + + D
Sbjct: 240 D----ERLKLGPVSIVDEDLGLAPGEIRVERRRVLAGTGSAPVALGEVQAQGKKRMAATD 295
Query: 297 FLLGCPVIIGCIV 309
+ G + G +
Sbjct: 296 WARGSRIEQGERL 308
>gi|86741876|ref|YP_482276.1| methionyl-tRNA formyltransferase [Frankia sp. CcI3]
gi|123750886|sp|Q2J845|FMT_FRASC RecName: Full=Methionyl-tRNA formyltransferase
gi|86568738|gb|ABD12547.1| methionyl-tRNA formyltransferase [Frankia sp. CcI3]
Length = 337
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 94/330 (28%), Positives = 156/330 (47%), Gaps = 27/330 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT A+ +L+AL+ S H +V+V T+P RP+G RG K VH A E +P
Sbjct: 1 MRLVFAGTPAVALPSLRALIDSPRHDVVAVVTRPDRPSG-RGRKVKPPPVHVLADEAGIP 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + E+ L+ D VVAYG ++P L + G+ N H SLLP +RGAA
Sbjct: 60 VLSPDRPRDPEFLATLAGLAPDCCPVVAYGALLPPAALAIPRHGWVNLHFSLLPAYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QR ++AGD+ TG ++ +++ +D+GPV + + + L L+ A +V
Sbjct: 120 PVQRTLLAGDDLTGASVFQIEPAMDSGPVYGVLTERVRPTDTSGDLLDRLAEAGAGLLVA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD + + Q GI++A K++ E R+++ + A V RA +P PGAW
Sbjct: 180 VMDGIADGTVRPVAQPAEGISFAPKLTAEEARIDWTKPAIAVDRLARAATPAPGAWTTFR 239
Query: 241 IGNKHERIKLLESQLVEGEGKP-----------------GEVI---NPNFTIACSQGAVR 280
R+K+ +L G+P G+++ + + V
Sbjct: 240 DR----RLKIGPVRLGAVSGRPAGPVALPAGLPAGGLPAGQIMVLPGGDVAVGTGTSPVL 295
Query: 281 IMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ ++ G + + G + G +G
Sbjct: 296 LGEVRPEGRGPMAAAAWARGVRIAKGETLG 325
>gi|254852730|ref|ZP_05242078.1| methionyl-tRNA formyltransferase [Listeria monocytogenes FSL
R2-503]
gi|300763864|ref|ZP_07073861.1| methionyl-tRNA formyltransferase [Listeria monocytogenes FSL
N1-017]
gi|258606053|gb|EEW18661.1| methionyl-tRNA formyltransferase [Listeria monocytogenes FSL
R2-503]
gi|300515600|gb|EFK42650.1| methionyl-tRNA formyltransferase [Listeria monocytogenes FSL
N1-017]
Length = 316
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 99/318 (31%), Positives = 160/318 (50%), Gaps = 11/318 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L L +S++ +V+V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPEFSVPVLTQL-ASTYDVVAVVTQPDRPVG-RKRVLTPPPVKKAALELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E E+ ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSKLGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ +T+A IS+ + ++++ + + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITAIPQDPEKVTFARNISREQEKIDWTKPGRTIFNQIRGLSPWPVAYTTL 237
Query: 240 --MIGNKHERIKLLESQLVEGEGKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDI 294
E + + +G+PG ++ I G + + +Q AG +D+
Sbjct: 238 EEKPFKIWEATYEETYEETKEDGEPGAILADKTTLKIVAGDGTLIVPTVIQPAGKPKMDV 297
Query: 295 GDFL--LGCPVIIGCIVG 310
F+ G + G
Sbjct: 298 HSFMTGAGRNLSKTTRFG 315
>gi|76789267|ref|YP_328353.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis A/HAR-13]
gi|123606810|sp|Q3KLG7|FMT_CHLTA RecName: Full=Methionyl-tRNA formyltransferase
gi|76167797|gb|AAX50805.1| methionyl-tRNA formyltransferase [Chlamydia trachomatis A/HAR-13]
Length = 316
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 106/308 (34%), Positives = 168/308 (54%), Gaps = 9/308 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+LRVV++GT +FA L+ L+ + IV + T+ +P +R K + S V + A ++
Sbjct: 1 MSLRVVYLGTPQFAATVLKTLLDAHTHIVGIVTRADKPQ-KRSSKLISSPVKQLALSKNI 59
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P K + Q + ADV +VVAYG+++ Q +L+ G YN HA LLP +RGA
Sbjct: 60 PLLQPIKTTDPAFLAQLREWQADVFIVVAYGVILKQELLDIPTYGCYNLHAGLLPAYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQR IM G +G +++MD +DTG +A + V I ++ GL + L+ ++
Sbjct: 120 APIQRCIMDGGVLSGNTVIRMDAGMDTGDIANVNYVAIGEDMTAGGLAEALAASGGELLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++E + PQ E T A K++K E +++ A V+ HIR +SP PGAW
Sbjct: 180 KTLQEIEAGTVRHVPQNEAMATLAPKLTKEEGGIHWDAPASQVYAHIRGVSPAPGAWTRY 239
Query: 240 MIGNK-HERIKLLESQLVEGEGK---PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+ K R+ +L +++ G PGEV+ + IAC QGA+R+ +Q G ++
Sbjct: 240 LSQGKGARRLGVLSARMESFSGNYGDPGEVLGVSGEDLLIACRQGALRLRMVQPEGKALM 299
Query: 293 DIGDFLLG 300
DF G
Sbjct: 300 KAKDFFNG 307
>gi|149194001|ref|ZP_01871099.1| methionyl-tRNA formyltransferase [Caminibacter mediatlanticus TB-2]
gi|149135954|gb|EDM24432.1| methionyl-tRNA formyltransferase [Caminibacter mediatlanticus TB-2]
Length = 296
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 77/305 (25%), Positives = 136/305 (44%), Gaps = 13/305 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMG+ E+AV L +L + + +I+SVYTQP +P G R + V + A + +L
Sbjct: 1 MNIVFMGSPEYAVKILDSL-NKNFNILSVYTQPDKPVG-RKKVLTPTPVKEYALKNNLKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
PT L ++ + L + V L + N HASLLP++RGA+PI
Sbjct: 59 YTPTSLKNDDVIKTLKPDFIVVAAYGLLLPKEILDIA----PCINLHASLLPKYRGASPI 114
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD TG+ M MD+ LDTG + V + + + + + A
Sbjct: 115 QSAILNGDRYTGVTSMLMDEGLDTGDILVWDYVEVGNKTSIDLFDELGN---IAANQIIY 171
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + Q + K + + +A + RA P+PG +
Sbjct: 172 TLKNFDKIKPLKQN-DIEATYSPKIKKQDGLISFDNALTIDRKYRAFQPWPGIFC---DK 227
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
K +++L++ G+ E+ I C QG ++++++Q G + +D ++ G
Sbjct: 228 FKINKMELIDIDAKNNIGEILEICKDGVIIGCKQGRIKLIKIQVPGKKEIDAISYINGKR 287
Query: 303 VIIGC 307
+ +G
Sbjct: 288 LKVGD 292
>gi|119025562|ref|YP_909407.1| methionyl-tRNA formyltransferase [Bifidobacterium adolescentis ATCC
15703]
gi|166214876|sp|A1A0U2|FMT_BIFAA RecName: Full=Methionyl-tRNA formyltransferase
gi|118765146|dbj|BAF39325.1| methionyl-tRNA formyltransferase [Bifidobacterium adolescentis ATCC
15703]
Length = 320
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 88/314 (28%), Positives = 149/314 (47%), Gaps = 14/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVS--SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
L+V+F GT + AV +L+ L +V+V T+P P G RG K V + V + A E L
Sbjct: 2 LKVLFAGTPDVAVPSLKLLAQDTEHFEVVAVLTRPDAPTG-RGRKLVANPVKQAALELGL 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + + + A A VVAYG ++ Q +L+A +G+YN H SLLP+WRGAA
Sbjct: 61 PVIESDPSEETFVSELAATGAQAAAVVAYGKILKQDVLDALPMGWYNLHFSLLPQWRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QR+I AG+ TG + ++ + +D GP+ V I ++ L L+ +H +
Sbjct: 121 PVQRSIWAGEKVTGATVFRIVRAMDAGPILAQSTVEIGAHETAGELLGRLAEDGSHLLAA 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L + + Q A+KI+ + + F IRA +P PGAW E+
Sbjct: 181 SLQALADDQIAPVEQPAGAYEVAQKITVEDAHIRFDVPVFAADRQIRACTPNPGAWCELH 240
Query: 241 IGNKHERI--KLLESQLVE-------GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGG 289
E +L +Q + +PG ++ N + S + ++ ++ G
Sbjct: 241 AHADAEPATLHVLRAQPADMSNPNAPASLEPGHIVAGKKNVWVGTSTEPLELLEVKAQGK 300
Query: 290 RVLDIGDFLLGCPV 303
+ + D+ G +
Sbjct: 301 KAMRAADWARGAHL 314
>gi|256379231|ref|YP_003102891.1| methionyl-tRNA formyltransferase [Actinosynnema mirum DSM 43827]
gi|255923534|gb|ACU39045.1| methionyl-tRNA formyltransferase [Actinosynnema mirum DSM 43827]
Length = 310
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 99/314 (31%), Positives = 157/314 (50%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+ +L+AL++S H +V+V T+P P G RG K S V A+E +
Sbjct: 1 MRLVFAGTPEPALPSLRALLASDRHEVVAVVTRPDAPTG-RGRKVERSPVAALAEERGIE 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K G ++ L+ D+ VVAYG ++P + L G+ N H SLLP WRGAA
Sbjct: 60 VLTPAKAGDPDFLARLAELAPDLCPVVAYGALLPTKALAIPTHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q ++ GD+ TG + ++ K LD GPV + + L L+ A ++
Sbjct: 120 PVQASVRHGDDITGASTFRIVKELDAGPVFGVVTERVGERDTAGDLLGRLAESGARLLLS 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D +E L Q G+++A KIS + R++F A + RA++P PGAW +
Sbjct: 180 TVDGIEDGTLRAVEQSPEGVSHAPKISVEDARLDFTTPATALDRLARAVTPEPGAWAQF- 238
Query: 241 IGNKHERIKLLESQLVEGEGKP---GEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ ER+KL VE +P G++ + + VR+ +Q G + +
Sbjct: 239 ---RGERLKLGPVAPVEDPVEPLAPGQIKVERKRVLVGTATHPVRLGEVQAQGKKRMAAT 295
Query: 296 DFLLGCPVIIGCIV 309
D+ G + G +
Sbjct: 296 DWARGVRIEPGERI 309
>gi|227890676|ref|ZP_04008481.1| methionyl-tRNA formyltransferase [Lactobacillus salivarius ATCC
11741]
gi|227867614|gb|EEJ75035.1| methionyl-tRNA formyltransferase [Lactobacillus salivarius ATCC
11741]
Length = 318
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 96/318 (30%), Positives = 167/318 (52%), Gaps = 14/318 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +VFMGT FA L+ ++ + +++++V TQP RP G R S V + A ++ +
Sbjct: 1 MT-NIVFMGTPAFAAPILEGIIENGYNVLAVVTQPDRPVG-RKRVLHASPVKEVALKYGI 58
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K G +E ++ + D+ V AYG +P +++ + K+ N H SLLP++RG
Sbjct: 59 KVFQPVKLSGSDEMQEIIDLQPDLIVTAAYGQFLPTKLIESAKIAAINVHGSLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+Q +IM GD++TG+ I+ M K +D G + ++ I S +T + +++S+L ++
Sbjct: 119 APVQYSIMNGDDKTGVTIIYMVKKMDAGDMLAQAELKIESTDDTGTIFEKMSILGRDVLL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + K+ N+ Q EN + ++ I E ++ A+ + RAL P PGA+ +
Sbjct: 179 ETLPKIISGNVEAVKQDENKVVFSPNIKPEEEILHLNLEAKEIDWKTRALRPAPGAYFK- 237
Query: 240 MIGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVR-IMRLQRAGGRVLD 293
K +R KL + +E + + PG V+ ++ G V I+ LQ AG + +D
Sbjct: 238 --NFKGKRTKLWSIKPLEEKTEFAPGYVVNVDKHELKVSAYNGTVYSIIELQPAGKQKMD 295
Query: 294 IGDFLL--GCPVIIGCIV 309
I +L G + IG +
Sbjct: 296 ITSYLNGVGQGLKIGQRI 313
>gi|154487019|ref|ZP_02028426.1| hypothetical protein BIFADO_00857 [Bifidobacterium adolescentis
L2-32]
gi|154084882|gb|EDN83927.1| hypothetical protein BIFADO_00857 [Bifidobacterium adolescentis
L2-32]
Length = 320
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 88/314 (28%), Positives = 149/314 (47%), Gaps = 14/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVS--SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
L+V+F GT + AV +L+ L +V+V T+P P G RG K V + V + A E L
Sbjct: 2 LKVLFAGTPDVAVPSLKLLAQDTEHFEVVAVLTRPDAPTG-RGRKLVANPVKQAALELGL 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + + + A A VVAYG ++ Q +L+A +G+YN H SLLP+WRGAA
Sbjct: 61 PVIESDPSEETFVSELAATGAQAAAVVAYGKILKQDVLDALPMGWYNLHFSLLPQWRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QR+I AG+ TG + ++ + +D GP+ V I ++ L L+ +H +
Sbjct: 121 PVQRSIWAGEKVTGATVFRIVRAMDAGPILAQSTVEIGAHETAGELLGRLAEDGSHLLAA 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L + + Q A+KI+ + + F IRA +P PGAW E+
Sbjct: 181 SLQALADDQIAPVEQPAGAYEVAQKITVEDAHIRFDVPVFAADRQIRACTPNPGAWCELH 240
Query: 241 IGNKHERI--KLLESQLVE-------GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGG 289
E +L +Q + +PG ++ N + S + ++ ++ G
Sbjct: 241 AHADAEPATLHVLRAQPADISNPNAPASLEPGHIVAGKKNVWVGTSTEPLELLEVKAQGK 300
Query: 290 RVLDIGDFLLGCPV 303
+ + D+ G +
Sbjct: 301 KAMRAADWARGAHL 314
>gi|221632830|ref|YP_002522052.1| methionyl-tRNA formyltransferase [Thermomicrobium roseum DSM 5159]
gi|221157101|gb|ACM06228.1| methionyl-tRNA formyltransferase [Thermomicrobium roseum DSM 5159]
Length = 313
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 104/312 (33%), Positives = 148/312 (47%), Gaps = 7/312 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
LR+VF GT EFAV +L+ L + +V V TQP RPAG RG V AQE L
Sbjct: 4 KLRLVFFGTPEFAVPSLRTLAAQPDFVVVLVVTQPDRPAG-RGRGLQPPPVKVLAQELGL 62
Query: 61 PALVPTKLGQEEYEQFLSFNADV-AVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P L E E L+ A + AVVVAYG +IP +L+ + GF N H SLLPR+RGA
Sbjct: 63 PCWQPETLRTAEAEARLAAVAPMLAVVVAYGKIIPASMLSMPRHGFLNVHPSLLPRYRGA 122
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PIQ A++ GD TGI+ M LD GP+ +PI + L L+ + A +
Sbjct: 123 SPIQAALLNGDAITGISFAVMTPELDAGPILRQFAIPIVPDDTGVTLGARLAEVAAELLP 182
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ E TY ++K + RV++ AE + IRAL P+P AW +
Sbjct: 183 DTIRDWIAGRIVPIPQDEGEATYTRPLTKADGRVDWSEPAERIERKIRALQPWPCAWTTI 242
Query: 240 MIGNKHERIKLLESQLVEGEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + E + PG V+ + + + +Q G R + D+
Sbjct: 243 G--GRRLILLRARLIETEMDLAPGCLSVMPTVVLVGTGTRPLALETVQPEGKRAMSALDW 300
Query: 298 LLGCPVIIGCIV 309
G + G
Sbjct: 301 WRGTRLANGTCF 312
>gi|107024057|ref|YP_622384.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia AU 1054]
gi|116691144|ref|YP_836767.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia HI2424]
gi|122978611|sp|Q1BSJ4|FMT_BURCA RecName: Full=Methionyl-tRNA formyltransferase
gi|166214880|sp|A0KBJ7|FMT_BURCH RecName: Full=Methionyl-tRNA formyltransferase
gi|105894246|gb|ABF77411.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia AU 1054]
gi|116649233|gb|ABK09874.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia HI2424]
Length = 330
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 125/326 (38%), Positives = 178/326 (54%), Gaps = 23/326 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 4 TLRVIFAGTPEFAAAALAAIHKAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYAVEHGMA 62
Query: 62 ALVPTKLGQEEYEQFLS---------FNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAADAIELLRTTPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + ++ I+ + TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIEEARIAIAPDDTTATLHDRLAA 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V+A+ +LE++ P +PQ +G+TYAEKI K E +++ + A+ + +RA P
Sbjct: 183 DGARLIVDALVRLERDGTLPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGK-----PGEVIN---PNFTIACSQGAVRIMR 283
FPG + IKL ++ V +G PG ++ +AC GA+R+ +
Sbjct: 243 FPGGVATLDGAA----IKLWAAEPVATDGTIASAAPGTIVEAAPEGVVVACGSGALRVTQ 298
Query: 284 LQRAGGRVLDIGDFLLGCPVIIGCIV 309
LQ+ GG+ L +FL G P+ G
Sbjct: 299 LQKPGGKRLPAREFLAGSPLAAGQRF 324
>gi|319935465|ref|ZP_08009901.1| methionyl-tRNA formyltransferase [Coprobacillus sp. 29_1]
gi|319809564|gb|EFW05978.1| methionyl-tRNA formyltransferase [Coprobacillus sp. 29_1]
Length = 317
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 85/309 (27%), Positives = 153/309 (49%), Gaps = 9/309 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
R+VFMGT+ F++A L+ L ++++V V +QP R G R + V +A + +P
Sbjct: 3 KKRIVFMGTASFSLAILKMLFDENYNVVGVVSQPDRYVG-RKKILTMPDVKVEALKHDVP 61
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P K+ + +Y+ L D+ + AYG ++PQ +L+A LG N HASLLP +RG AP
Sbjct: 62 VIQPQKIRE-DYQAILDLKPDLIITAAYGQLVPQTVLDAPTLGCINVHASLLPMYRGGAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ + I+ G ++TG+ IM M K +D G + + PI L + LS + A + +
Sbjct: 121 VHQCIIDGQDQTGVTIMYMVKKMDAGNIISQQVTPIHIEDTVGDLYERLSEVGAQLLKDT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + PQ E+ +TYA +S+ + R+++ A V+N +R +P+PG++
Sbjct: 181 LPSILEGTNQSLPQDESLVTYAPTLSREDERIDWNLGALQVYNKVRGTNPWPGSYTTYQG 240
Query: 242 G-------NKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDI 294
H+ + + + G ++ + G I Q G + + +
Sbjct: 241 KVVKIWAGQVHQCENARKHHVHQDNGTIVKIFKDAIGVKVCDGVYLITEFQLEGKKKMFV 300
Query: 295 GDFLLGCPV 303
D+L G +
Sbjct: 301 KDYLNGHNI 309
>gi|260584742|ref|ZP_05852488.1| methionyl-tRNA formyltransferase [Granulicatella elegans ATCC
700633]
gi|260157765|gb|EEW92835.1| methionyl-tRNA formyltransferase [Granulicatella elegans ATCC
700633]
Length = 312
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 100/301 (33%), Positives = 163/301 (54%), Gaps = 12/301 (3%)
Query: 8 MGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MGT EF+ L ALVSS + +++V TQP RP G R S V K A E ++ P
Sbjct: 1 MGTPEFSTKVLHALVSSEEYEVIAVVTQPDRPVG-RKKVITPSPVKKYALEQNIAVYQPE 59
Query: 67 K-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
K G EE EQ ++ +AD+ V AYG +P++ L K G N HASLLP++RG API A
Sbjct: 60 KLTGSEELEQLMALDADLIVTAAYGQFLPKKFLEFPKQGAVNVHASLLPKYRGGAPIHYA 119
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
I+ GD+ TG+ IM+M +D G + R +PI + A + ++LS++ A +++ + K+
Sbjct: 120 IINGDSHTGVTIMRMVSKMDAGNILSQRSIPIEQTDDVASMFEKLSIVGAELLLDTLPKI 179
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKH 245
+ Q E +TY+ I++ + ++++ + A+ V IR L P+P ++ +
Sbjct: 180 FDGTITEIVQDEAFVTYSPNITREQEQIDWTKEAKMVDCFIRGLRPWPTSFTIL----NG 235
Query: 246 ERIKLLESQLVE--GEGKPGEVINPN--FTIACSQG-AVRIMRLQRAGGRVLDIGDFLLG 300
ER+K+ + ++V+ +PG + N +AC + I+ LQ AG + F+ G
Sbjct: 236 ERVKIWQVKVVDQTTAEQPGTLFKENHHLYVACGNQTVLEIIELQPAGKAKMSSDAFMNG 295
Query: 301 C 301
Sbjct: 296 F 296
>gi|297559830|ref|YP_003678804.1| methionyl-tRNA formyltransferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844278|gb|ADH66298.1| methionyl-tRNA formyltransferase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 311
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 97/315 (30%), Positives = 153/315 (48%), Gaps = 12/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VF GT + AV +L+AL+ S H + +V T+P +G RG K S V + A+ +
Sbjct: 1 MKLVFAGTPQVAVPSLRALIDSGHEVAAVVTRPDARSG-RGRKVSASPVGELAESEGIEV 59
Query: 63 LVPTKLGQEEYEQFLSFN-ADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K G E+ + L+ D VVAYG ++PQ L+ + G+ N H SLLP WRGAAP
Sbjct: 60 LKPAKAGDPEFLERLAHIAPDCCPVVAYGALLPQSALDIPRRGWVNLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A++ GD+ TG + ++ K LD GPV + + L LSV A +V
Sbjct: 120 VQHAVLHGDDITGASTFRIVKELDAGPVFGTLTETVRPTDTSGELLDRLSVSGAELLVRT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + + L Q +GI+YA K++ + ++F A V RA +P PGAW
Sbjct: 180 IDGIAADRLSPVEQPADGISYASKLTPEDAELDFTAPALRVDRTARACTPAPGAWTTFRG 239
Query: 242 GNKHERIKLLESQLVEGEGK----PGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
G R+K+ + PG++ + + V + +Q G R +
Sbjct: 240 G----RLKVGPVTPLTDADTPALDPGQLHADKRRVLVGTATHPVVLGEVQPQGKRAMAAV 295
Query: 296 DFLLGCPVIIGCIVG 310
D+ G + +G
Sbjct: 296 DWARGVRPVDEDRLG 310
>gi|294786451|ref|ZP_06751705.1| methionyl-tRNA formyltransferase [Parascardovia denticolens F0305]
gi|315226021|ref|ZP_07867809.1| methionyl-tRNA formyltransferase [Parascardovia denticolens DSM
10105]
gi|294485284|gb|EFG32918.1| methionyl-tRNA formyltransferase [Parascardovia denticolens F0305]
gi|315120153|gb|EFT83285.1| methionyl-tRNA formyltransferase [Parascardovia denticolens DSM
10105]
Length = 325
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 93/321 (28%), Positives = 145/321 (45%), Gaps = 19/321 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH--SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+R++F GT + AV LQAL+ + +V V T+P P G RG K S V + A + L
Sbjct: 1 MRILFAGTPQVAVGPLQALIQAGGKLEVVGVLTRPDAPQG-RGRKLTPSPVKQAAIQAGL 59
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E + + D A VVAYG ++ L+A LG+YN H SLLP++RGAA
Sbjct: 60 PVIEDKPTSPEFFRTLEDLHPDAAAVVAYGNLLKPEALDALPLGWYNLHFSLLPQYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRAI AG+ TG+ + K+ LD GP+ V I + L LS AH +
Sbjct: 120 PVQRAIWAGETITGVTVFKIGPGLDDGPIVAQSTVEIGPHETAGELLDRLSQDGAHLLCA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + L PQ A KI + R+ F A IRA +P PGAW ++
Sbjct: 180 VLQGIADGRLAFRPQPAGSFEMAAKIHPDDARIRFAVPAFAADRQIRACTPEPGAWCQLH 239
Query: 241 IGNK-----HERIKLLESQLVEGE---------GKPGE--VINPNFTIACSQGAVRIMRL 284
++ + ++ + + E KPG V + + + + ++
Sbjct: 240 TQEDSDKAAPIKLTIAQAHVDKSETAGKPAAGALKPGRLLVTKKHIWLGTLTDPLELDQV 299
Query: 285 QRAGGRVLDIGDFLLGCPVII 305
+ G + + D+ G +
Sbjct: 300 KAQGKKQMKAADWARGARLSA 320
>gi|307543964|ref|YP_003896443.1| methionyl-tRNA formyltransferase [Halomonas elongata DSM 2581]
gi|307215988|emb|CBV41258.1| methionyl-tRNA formyltransferase [Halomonas elongata DSM 2581]
Length = 326
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 129/320 (40%), Positives = 182/320 (56%), Gaps = 16/320 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT +FA A+L+AL++S HS+V VYTQP R AG RG K S V AQ LP
Sbjct: 4 SLRVIFAGTPDFAAASLRALLASQHSVVGVYTQPDRAAG-RGRKLTASPVKVLAQSHDLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E + L+ D+ VVVAYGL++P+ IL+ + G N HASLLPRWRGAA
Sbjct: 63 VHQPESLRTPEAQVQLASLDADLMVVVAYGLILPREILDTPRRGCINVHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD+E+G+ +M+MD+ LDTG + R+ PI ++ L L+ L A++E
Sbjct: 123 PIQRAIEAGDSESGVTLMQMDEGLDTGDMLLTRRTPIEADTTGGSLHDTLAELGGEALIE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D L L PQ ++G+TYA K+SK E ++F + IRA +P+P AW +
Sbjct: 183 TLDALAGPGLTAQPQPDDGVTYAAKLSKAEAELDFREPTATLAARIRAFNPWPVAWCALG 242
Query: 241 IGNKHERIKLLESQL-----VEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVL 292
ER++L ++ E PG ++ IAC G +R+ R Q GG+ L
Sbjct: 243 D----ERLRLWLAEPGAPARHETNATPGTLLEPDADALRIACGDGVLRVTRAQLPGGKPL 298
Query: 293 DIGDFLLGC--PVIIGCIVG 310
D+ + L +G +G
Sbjct: 299 DVAELLRARADRFTVGTRLG 318
>gi|332702664|ref|ZP_08422752.1| Methionyl-tRNA formyltransferase [Desulfovibrio africanus str.
Walvis Bay]
gi|332552813|gb|EGJ49857.1| Methionyl-tRNA formyltransferase [Desulfovibrio africanus str.
Walvis Bay]
Length = 332
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 116/309 (37%), Positives = 167/309 (54%), Gaps = 9/309 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M+LR+VFMGT EFA L+ ++ +V+VYTQP RP G RG S V + A
Sbjct: 1 MSLRLVFMGTPEFAATVLERVLRWDGGEVVAVYTQPDRPCG-RGQVCKPSPVKELALARD 59
Query: 60 LPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
L L P + L DV +V AYGL++PQR+L+ G N HASLLP++RG
Sbjct: 60 LRVLQPVNFKADANVGELKALAPDVLLVAAYGLILPQRVLDIPTHGAVNVHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQRAI+AG++ TGI IMKM+ LD+GP+ R + I+ + EL+ + +
Sbjct: 120 AAPIQRAILAGEHATGITIMKMEAGLDSGPMLLQRALRIADYDTAQSIHDELAAMGGDML 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
VEA++ L Q L PQ + TYA K+ K E +++ + AE++HN +RA+ P+PGA+
Sbjct: 180 VEALELLCQGKLTAIPQDHSKATYAPKLEKKEGEIDWDQPAEDIHNRVRAMHPWPGAFFS 239
Query: 239 MMIGNKHERIKLLESQ---LVEGEGKPGEVIN--PNFT-IACSQGAVRIMRLQRAGGRVL 292
++ R+ + + + E KPGE + IAC A + LQ G R +
Sbjct: 240 WRRNDESVRLGIQPGRLGGPLPPEAKPGEFLGLQDGLLAIACRDRAYLVPMLQPQGKRAM 299
Query: 293 DIGDFLLGC 301
F G
Sbjct: 300 PATAFACGY 308
>gi|206558868|ref|YP_002229628.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia J2315]
gi|238693075|sp|B4E7V8|FMT_BURCJ RecName: Full=Methionyl-tRNA formyltransferase
gi|198034905|emb|CAR50777.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia J2315]
Length = 330
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 125/326 (38%), Positives = 177/326 (54%), Gaps = 23/326 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 4 TLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYAVEHGMT 62
Query: 62 ALVPTKLGQEEYEQFLS---------FNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAADAIELLRTTQHDVMVVAAYGLLLPQEVLDIPRAGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + ++ I+ + TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIEEARIAIAPDDTTATLHDRLAA 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V+A+ +LE++ P +PQ +G+TYAEKI K E +++ + A+ + +RA P
Sbjct: 183 DGARLIVDALVRLERDGTLPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGK-----PGEVIN---PNFTIACSQGAVRIMR 283
FPG + IKL ++ V G PG ++ +AC GA+R+ +
Sbjct: 243 FPGGVATLDGAA----IKLWAAEPVAARGTMANAAPGTIVEAAPEGVVVACGSGALRVTQ 298
Query: 284 LQRAGGRVLDIGDFLLGCPVIIGCIV 309
LQ+ GG+ L +FL G P+ G
Sbjct: 299 LQKPGGKRLPAREFLAGSPLAAGQRF 324
>gi|91781431|ref|YP_556637.1| methionyl-tRNA formyltransferase [Burkholderia xenovorans LB400]
gi|123169141|sp|Q147A4|FMT_BURXL RecName: Full=Methionyl-tRNA formyltransferase
gi|91685385|gb|ABE28585.1| methionyl-tRNA formyltransferase [Burkholderia xenovorans LB400]
Length = 328
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 121/321 (37%), Positives = 167/321 (52%), Gaps = 15/321 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K S V + AQE L
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHGAGFPVPLVLTQPDRPAG-RGMKLQASPVKRYAQEHGLA 62
Query: 62 ALVPTKLGQEEYEQFLS---------FNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L+ LG N HASL
Sbjct: 63 VAQPPSLRRAGKYPEQAAAAIGQLRATPHDVMVVAAYGLILPQEVLDIPPLGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETGI +M+MD LDTG + + IS + TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGITLMQMDVGLDTGAMISETRTAISGDDTTATLHDRLAQ 182
Query: 173 LCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A + ++ L +PQ G+TYAEKI K E +++ R A + +RA P
Sbjct: 183 DGAKLIVEALVELERTGRLAATPQPAEGVTYAEKIGKHEAALDWRRPAAVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAG 288
FPG + G + + + + G PG + +AC +GA+R+ +LQ+ G
Sbjct: 243 FPGGVGTLEDGTSIKIWAAIPAD-TKAGGAPGTIAEVTPEGVVVACGEGALRLTQLQKPG 301
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
G+ L + +FL G + +G
Sbjct: 302 GKRLPVREFLAGSTLAVGQRF 322
>gi|315604185|ref|ZP_07879251.1| methionyl-tRNA formyltransferase [Actinomyces sp. oral taxon 180
str. F0310]
gi|315313891|gb|EFU61942.1| methionyl-tRNA formyltransferase [Actinomyces sp. oral taxon 180
str. F0310]
Length = 314
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 108/312 (34%), Positives = 164/312 (52%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E AV TL+AL +SSH +V V T+PP G RG S + + A L
Sbjct: 1 MRIIFAGTPEAAVPTLRALHASSHEVVLVITRPPARRG-RGKTLHPSPIAELAASVGLEL 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L + L E Q ++ D+ VVVAYG ++P IL G+ N H S LPRWRGAAP
Sbjct: 60 LETSSLKTPEIAQRIADARADIGVVVAYGGLVPATILEMPTHGWINLHFSDLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q AI AGD T + +++ LDTG V +VPI+ + L ++ AH ++
Sbjct: 120 VQWAIRAGDTSTASCVFALEEGLDTGAVYSRVEVPIARHSAGDLLA-SMACAGAHQVLGV 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D LE PQ E G+T+A ++S+ + V+F SA++ IR+++P PGA+ +
Sbjct: 179 VDSLESGTAHAHPQPEEGVTHARRLSRADGYVSFTHSADHEDRVIRSVTPNPGAFTVLPG 238
Query: 242 GNKHERIKLLESQLVE-GEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
R+KL + VE + +PG EV T+ C+ GA+ + + AG +D +
Sbjct: 239 ---GARMKLGVATPVERSDLEPGQLEVTKREVTVGCASGALLLGDVAPAGKSWMDGAAWA 295
Query: 299 LGCPVIIGCIVG 310
G + +G
Sbjct: 296 RGARLGEEVRLG 307
>gi|224542114|ref|ZP_03682653.1| hypothetical protein CATMIT_01289 [Catenibacterium mitsuokai DSM
15897]
gi|224524951|gb|EEF94056.1| hypothetical protein CATMIT_01289 [Catenibacterium mitsuokai DSM
15897]
Length = 309
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 150/310 (48%), Gaps = 10/310 (3%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT+ F++ LQ L+ + + +V V TQP R G R +S V ++A + +P L P +
Sbjct: 1 MGTASFSLKVLQMLLENKYDVVGVVTQPDRYVG-RKKVLTMSDVKQEALKHDIPVLQPER 59
Query: 68 LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127
+ + +Y+ L D+ + AYG ++P +L A +LG N HASLLP +RG AP+ RAI+
Sbjct: 60 I-RNDYQAVLDLKPDLIITAAYGQIVPTAVLEAPRLGCVNVHASLLPLYRGGAPVHRAII 118
Query: 128 AGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQ 187
G ETG+ IM M + +D G + + PI+ + N + L+ + A + + + +
Sbjct: 119 DGRTETGVTIMYMAEKMDAGDIISQKSTPITDDDNLEIVYDRLTDIGAELLKDTLPSIFD 178
Query: 188 NNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG----- 242
PQ + + YA I + + R+++ ++A + NH+R L P PG +
Sbjct: 179 ETNDRIPQNPDEVVYAPIIKREDERLDWNKTAREIFNHVRGLYPHPGTFTTYNGQIVKIY 238
Query: 243 --NKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
H+ E E G ++ + G I +Q +G + + + D+L G
Sbjct: 239 KGEIHDCPNAKEHHKDEKNGTIVKIFKDAIGVKVEDGVFVITEIQLSGKKRMSVKDYLNG 298
Query: 301 CPV-IIGCIV 309
+ +G
Sbjct: 299 KNIFEVGTQF 308
>gi|258423741|ref|ZP_05686627.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A9635]
gi|257845973|gb|EEV70001.1| methionyl-tRNA formyltransferase [Staphylococcus aureus A9635]
Length = 311
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 109/317 (34%), Positives = 169/317 (53%), Gaps = 15/317 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A ++ L
Sbjct: 1 MT-KIIFMGTPDFSTTVLEMLI-AEHDVIAVVTQPDRPVG-RKRVMTPPPVKKVAMKYDL 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K G EE EQ L + D+ V A+G ++P+ +L KLG N HASLLP++RG
Sbjct: 58 PVYQPEKLSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I N N + +LSVL A +
Sbjct: 118 APIHQAIIDGEQETGITIMYMVKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + + PQ + T+A I + + R+++ + V N IR LSP+P A+ M
Sbjct: 178 ETLPSIIEGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
N +K+ +++LVE +PG +I +A + AV I +Q AG + +
Sbjct: 238 DDTN----LKIYDAELVETNKINEPGTIIETTKKAIIVATNNNEAVAIKDMQLAGKKRML 293
Query: 294 IGDFLLGCPVI-IGCIV 309
++L G +G +
Sbjct: 294 AANYLSGAQNTLVGKKL 310
>gi|170734475|ref|YP_001766422.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia MC0-3]
gi|238688624|sp|B1K0J5|FMT_BURCC RecName: Full=Methionyl-tRNA formyltransferase
gi|169817717|gb|ACA92300.1| methionyl-tRNA formyltransferase [Burkholderia cenocepacia MC0-3]
Length = 330
Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 125/326 (38%), Positives = 177/326 (54%), Gaps = 23/326 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +
Sbjct: 4 TLRVIFAGTPEFAAAALAAIHKAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYAVEHGMA 62
Query: 62 ALVPTKLGQEEYEQFLS---------FNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAADAIELLRTTPHDVMVVAAYGLLLPQEVLDIPRAGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG + ++ I+ + TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDVGLDTGAMIEEARIAIAPDDTTATLHDRLAA 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V+A+ +LE++ P +PQ +G+TYAEKI K E +++ + A+ + +RA P
Sbjct: 183 AGARLIVDALVRLERDGTLPATPQPADGVTYAEKIGKHEAALDWRKPADVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGK-----PGEVIN---PNFTIACSQGAVRIMR 283
FPG + IKL ++ V G PG ++ +AC GA+R+ +
Sbjct: 243 FPGGVATLDGAA----IKLWAAEPVAAHGTIATAAPGTIVEAAPEGVVVACGSGALRVTQ 298
Query: 284 LQRAGGRVLDIGDFLLGCPVIIGCIV 309
LQ+ GG+ L +FL G P+ G
Sbjct: 299 LQKPGGKRLPAREFLAGSPLAAGQRF 324
>gi|289548643|ref|YP_003473631.1| methionyl-tRNA formyltransferase [Thermocrinis albus DSM 14484]
gi|289182260|gb|ADC89504.1| methionyl-tRNA formyltransferase [Thermocrinis albus DSM 14484]
Length = 297
Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats.
Identities = 106/303 (34%), Positives = 161/303 (53%), Gaps = 10/303 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT +FA+ +L+ + ++ V QP RPAG RG++ A E LP
Sbjct: 1 MRVLFMGTPKFALPSLEKIY-RHFELIGVVCQPDRPAG-RGMRPQPPPTKVFALERHLPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P + E LS VVVAYG ++ +IL+A G N HASLLP++RGAAPI
Sbjct: 59 YQPATSRELEDVV-LSLKPQCVVVVAYGKILSSKILSAVPYGCVNLHASLLPKYRGAAPI 117
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRA+MAG+ TGI +M MD+ +DTG + V I N L ++LS A +++ +
Sbjct: 118 QRALMAGEKNTGITVMLMDEGMDTGDILAQETVSIEEEDNLETLSEKLSHKGADLLLQTL 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + + PQ A I K E R+ + ++E+V + +R L P +
Sbjct: 178 QRWFRGEIEPVPQKGEPTY-APPIQKEEFRICWKATSESVKDRVRGLYPNA-----YTLT 231
Query: 243 NKHERIKLLESQLVEGEGKPGEVIN-PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+ RI++L+ + VEG G+PGE+++ +ACS+GAV I L G+ + DFL G
Sbjct: 232 PEGHRIRILKVRPVEGTGEPGEILSRNRLVVACSKGAVEIQELITPKGKRVRGEDFLKGY 291
Query: 302 PVI 304
+
Sbjct: 292 SLK 294
>gi|332295841|ref|YP_004437764.1| Methionyl-tRNA formyltransferase [Thermodesulfobium narugense DSM
14796]
gi|332178944|gb|AEE14633.1| Methionyl-tRNA formyltransferase [Thermodesulfobium narugense DSM
14796]
Length = 305
Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats.
Identities = 87/310 (28%), Positives = 144/310 (46%), Gaps = 8/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ ++F GT ++V L+ L S H IV + T+ P P G R S V A++ +P
Sbjct: 1 MDLIFFGTPIYSVNVLERLEQSKHRIVGIVTKKPSPFG-RKKILKPSPVETFAKQNCIPL 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
V +E E N ++ VV +G +IP R+++ K N H SLLP++RG AP+
Sbjct: 60 YVGRTKDKEFLEFCKELNPEIGVVAFFGEIIPTRVIDLFKYKMINLHPSLLPKYRGIAPV 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
R I+ G+N GI I ++ K LD G + IS ++ L LS + +V +
Sbjct: 120 PRTILNGENIFGITIHEVIKELDAGDIYDQISFKISEKKSSGELLDFLSKEGSDLLVHVL 179
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D +E+ L PQ TYAE + E +F A + + A +P P A ++ G
Sbjct: 180 DNIEKGCLKKIPQNHKEATYAEVLKLDEVIFSFNEKAIEIERKVLAANPDPIARTKISKG 239
Query: 243 NKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ + ++ EG G+P +++ I +G + ++ +Q G + D L
Sbjct: 240 DLL----VYKAYASEGRGEPSKIVGIEKDALKIGTGEGIIILLEVQFPGKNRIKGKDLLN 295
Query: 300 GCPVIIGCIV 309
G + IG +
Sbjct: 296 GLRLKIGDFL 305
>gi|330685502|gb|EGG97155.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis
VCU121]
Length = 310
Score = 153 bits (385), Expect = 5e-35, Method: Composition-based stats.
Identities = 101/308 (32%), Positives = 167/308 (54%), Gaps = 13/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ +++FMGT +F+ L+ L+ + +V+V TQP RP G R V K A E +
Sbjct: 1 MS-KIIFMGTPDFSTKVLEMLI-AEQEVVAVVTQPDRPVG-RKRVMTPPPVKKVALEHDI 57
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K+ E + L + D+ V A+G ++P+ +L++ KLG N HASLLP++RG
Sbjct: 58 PVYQPEKIKDSEELQTLLDMDVDLIVTAAFGQILPESLLDSPKLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + R + I + N + +LS L A +
Sbjct: 118 APIHQAIIDGEKETGITIMYMVKKLDAGNIISQRAIAIEQDDNVGSMHDKLSFLGADLLK 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + Q E ++A IS+ + ++N+ + A+ +HNHIR LSP+P A+ M
Sbjct: 178 ETLPSILNGTNDSIVQDEAKASFASNISREDEKINWNQDAQVIHNHIRGLSPWPVAYTIM 237
Query: 240 MIGNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIAC-SQGAVRIMRLQRAGGRVLDI 294
N +K+ + +V G +G+PG ++ +A S+ + + +Q AG + + +
Sbjct: 238 DDKN----LKIYGAHIVSGKKGEPGTIVETTKKAIIVATASEECIALTDIQLAGKKRMQV 293
Query: 295 GDFLLGCP 302
++L G
Sbjct: 294 ANYLSGVQ 301
>gi|16331503|ref|NP_442231.1| methionyl-tRNA formyltransferase [Synechocystis sp. PCC 6803]
gi|6016038|sp|Q55163|FMT_SYNY3 RecName: Full=Methionyl-tRNA formyltransferase
gi|1001159|dbj|BAA10301.1| methionyl-tRNA formyltransferase [Synechocystis sp. PCC 6803]
Length = 330
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 99/326 (30%), Positives = 153/326 (46%), Gaps = 29/326 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH---SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
++ VF GT +FAV TL+AL+ H +++V +QP R G RG K + S V + A +
Sbjct: 2 MKTVFFGTPDFAVPTLEALL--GHPDIDVLAVVSQPDRRRG-RGSKLIPSPVKEVAVQAG 58
Query: 60 LPALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+P P ++ + + + + AD VVVAYG ++ IL +LG N H SLLP++R
Sbjct: 59 IPVWQPERVKRCQETLAKLKNCQADFFVVVAYGQLLSPEILVMPRLGCVNVHGSLLPKYR 118
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAP+Q AI G+ ETG+ M MD+ +DTG + PI N + L+ A
Sbjct: 119 GAAPLQWAIANGETETGVTTMLMDEGMDTGAMLLKTTTPIGLMDNLTAIGDRLARSGAEL 178
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+V+ + L+ L PQ E TYA + KG+ +N+ RSA +HN +R +P
Sbjct: 179 LVQTLKDLDAGQLQPIPQTETEATYAPLLKKGDFVINWHRSALEIHNQVRGFAPACHTAW 238
Query: 238 ---------------EMMIGNKHERIKLLESQLVEG--EGKPGEVI----NPNFTIACSQ 276
E + L + L G+PG +I N +
Sbjct: 239 GEQILKIISTVPLGAEFFPLLPEKYQDLATAYLNYSLEAGEPGNIIGTIKNWGPVLETGN 298
Query: 277 GAVRIMRLQRAGGRVLDIGDFLLGCP 302
G + + ++Q G + DF+ G
Sbjct: 299 GHLLLEQVQPPGKKPQSGWDFINGNR 324
>gi|291530593|emb|CBK96178.1| methionyl-tRNA formyltransferase [Eubacterium siraeum 70/3]
Length = 306
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 98/311 (31%), Positives = 162/311 (52%), Gaps = 15/311 (4%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +FAV+ L+ L H++++V+TQP +P RG K V + A+++ +P P
Sbjct: 1 MGTPDFAVSALEELHK-HHNVMAVFTQPDKPK-NRGKKMQAPPVKECAEKYGIPVYQPLS 58
Query: 68 LGQEEYEQF-----LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L + E + D VV AYG ++P+ IL K N HASLLP++RGAAPI
Sbjct: 59 LRKGEDAEKSLELLKQLAPDCIVVAAYGQILPESILELPKYKCINIHASLLPKYRGAAPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q+ I+ G+ E+G+ M M K LDTG + R V I+ ++ L L+ ++E +
Sbjct: 119 QKCIIDGETESGVTTMLMAKGLDTGDMLMSRSVKITPDMTGGELHDSLAATGGELIIETL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
E+ + PQ + YA I+K R++F ++A +V+N IR +SP P A+ +
Sbjct: 179 KACEEGTIKPVPQDGSLSCYAGLITKEMCRIDFSKNAIDVYNFIRGMSPSPCAYTFIGD- 237
Query: 243 NKHERIKLLESQLVE-GEGKP-GEVIN-PNFTIACSQG-AVRIMRLQRAGGRVLDIGDFL 298
+R+K+ + + + KP G V+N + T+ C +R +Q GG+ ++ FL
Sbjct: 238 ---KRLKVYFAVMTDITSDKPCGTVMNENDLTVVCGDKKCIRFTDVQGEGGKRMNTASFL 294
Query: 299 LGCPVIIGCIV 309
G + ++
Sbjct: 295 NGNKLQRDTVL 305
>gi|110597711|ref|ZP_01385995.1| methionyl-tRNA formyltransferase [Chlorobium ferrooxidans DSM
13031]
gi|110340618|gb|EAT59098.1| methionyl-tRNA formyltransferase [Chlorobium ferrooxidans DSM
13031]
Length = 314
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 89/305 (29%), Positives = 154/305 (50%), Gaps = 5/305 (1%)
Query: 3 LRVVFMGTSEFAVATLQAL--VSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+R+VFMGT EFAV +LQA+ + S V V T +P ++ ++ V + A L
Sbjct: 1 MRIVFMGTPEFAVPSLQAIAELKSEFEPVLVVTGSDKPRRKKNAEAEPCPVKQAALALGL 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ E+ ++ A+VVA ++P + +LG +N HAS+LP +RGAA
Sbjct: 61 AVYEIDDVASPEFAARVAACRADAIVVAAFRILPPEVYEQARLGAFNLHASILPAYRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ ETG+ + K +DTG + K P++ + N L + LSV+ A +VE
Sbjct: 121 PINWAIIRGEKETGVTTFFLKKSVDTGNIILTAKTPVAPDENATDLARRLSVIGAGVVVE 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + ++P+S Q ++ + A K+++ TR+N+ ++A +HN IR L+ P AW
Sbjct: 181 TLRLMASGSVPVSGQDDSLASRAPKLTRDNTRINWSQTAAEIHNFIRGLALRPSAWTTFE 240
Query: 241 IGNKHE-RIKLLESQLVEGEGKPGEV-INPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + S++ PG + + S G + ++ LQ G + ++ +F
Sbjct: 241 GKTMKIFKASVATSEITSSSETPGTIQVKDGRLFAKGSDGWIELLSLQLEGRKPMEATEF 300
Query: 298 LLGCP 302
L G
Sbjct: 301 LRGFR 305
>gi|319785851|ref|YP_004145326.1| methionyl-tRNA formyltransferase [Pseudoxanthomonas suwonensis
11-1]
gi|317464363|gb|ADV26095.1| methionyl-tRNA formyltransferase [Pseudoxanthomonas suwonensis
11-1]
Length = 306
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 110/307 (35%), Positives = 158/307 (51%), Gaps = 13/307 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT +FAV +L+ +V+VYTQP RPAG RG S V +A +P
Sbjct: 1 MRIVFAGTPDFAVPSLRVAAQRG-EVVAVYTQPDRPAG-RGRGLQASPVKLEAVGRGIPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P EQ + D+ VVVAYGL++P+ +L G +N HASLLPRWRGAAP
Sbjct: 59 FQPESLRDPASQEQLRALKPDLMVVVAYGLILPKAVLAIPTHGCWNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI AGD ETG+ +M+M+ LDTGPV ++ I L L+ L A + +
Sbjct: 119 IQRAIQAGDAETGVCLMQMEAGLDTGPVLLEQRTAIGEAETGGQLHDRLAELGAQVLGDG 178
Query: 182 -MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
PQ G+ YA K+ K E R+++ R A + +RA +P+P A +
Sbjct: 179 LGLLRAGIRPVPRPQPAEGVAYAHKLDKAEARLDWNRPAVELARTVRAFNPWPVAEAPVA 238
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
ER+++ + V+ PG ++ IAC +G +R+ +QR GGR +
Sbjct: 239 G----ERLRIHGAIAVDQAHGAAPGTLLGASRDGIDIACGEGVLRLRTVQREGGRAITAA 294
Query: 296 DFLLGCP 302
D+L
Sbjct: 295 DWLNARR 301
>gi|227893308|ref|ZP_04011113.1| methionyl-tRNA formyltransferase [Lactobacillus ultunensis DSM
16047]
gi|227864888|gb|EEJ72309.1| methionyl-tRNA formyltransferase [Lactobacillus ultunensis DSM
16047]
Length = 308
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 91/308 (29%), Positives = 165/308 (53%), Gaps = 13/308 (4%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT EF+V L+ L+ +++ I +V TQP + G R K S A++ +LP P K
Sbjct: 1 MGTPEFSVPVLEGLIDNNYEIKAVVTQPDKKVG-RKQKIAKSPAKIAAEKHNLPVFQPAK 59
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
G EE ++ + +AD+ V AYG + + LN+ K+ N H SLLP++RG APIQ ++
Sbjct: 60 LSGSEEMQKLIDMHADLIVTAAYGQFLSTKFLNSVKIAAVNVHGSLLPKYRGGAPIQYSL 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ GD ETGI IM+M K +D G + + I + N L +LS++ +++ + +
Sbjct: 120 INGDQETGITIMEMVKKMDAGDIYAQEAIKIEPDDNAGSLFNKLSIVGRDLLLKTLPAII 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ PQ + + ++ I+K + ++ +A +N IRAL+P PGA++ + +
Sbjct: 180 DGTVKKIPQDPDKVIFSPNITKAQEKITSEMTATQANNMIRALNPDPGAYMMIQG----K 235
Query: 247 RIKLLESQLVE--GEGKPGEVI--NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLL-- 299
R K+ ++++ + + G V+ F ++ ++G + ++ +Q +G + +DI +FL
Sbjct: 236 RFKIWKAEVADDHTDLVAGSVVAKKGRFALSFAEGTVLNLLEVQPSGKKRMDIKNFLNGQ 295
Query: 300 GCPVIIGC 307
G G
Sbjct: 296 GNKFTSGE 303
>gi|87306775|ref|ZP_01088922.1| methionyl-tRNA formyltransferase [Blastopirellula marina DSM 3645]
gi|87290954|gb|EAQ82841.1| methionyl-tRNA formyltransferase [Blastopirellula marina DSM 3645]
Length = 349
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 98/318 (30%), Positives = 167/318 (52%), Gaps = 12/318 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRP-AGRRGLKSVLSAVHKKAQEFSLP 61
LR+V MGT FA T + L++S H+++++ TQPPR G R ++ LS + A+EF LP
Sbjct: 14 LRIVMMGTGPFAAPTFRRLLASPHNVLALLTQPPRAMRGNR--QAPLSPMRAVAEEFDLP 71
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E + ++ AD+ VV YG ++ L KLG N H SLLP++RGAA
Sbjct: 72 IHWPESVNTPESHEILRAYAADLFVVCDYGQILSADTLMLAKLGGINLHGSLLPKYRGAA 131
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ A+ GD ETG+ ++ M LD GP+ + K PI ++ + L++ LS++ +++
Sbjct: 132 PVNWAMYNGDAETGVTVIHMTPKLDGGPILAIAKTPIDADEDAVELEERLSLIGIEPVID 191
Query: 181 AMDKLEQN--NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ LE++ N P Q +T A ++ K + + + R+A ++N RA P+PG +
Sbjct: 192 SIALLEKHGNNPPGQLQDPALVTKARRLRKEDGDLPWARTAAEIYNQHRAFQPWPGTYTH 251
Query: 239 MMIGN-KHERIKLLESQLVEGEG--KPGEV---INPNFTIACSQGAVRIMRLQRAGGRVL 292
+ + R+ + + + PG+V +A + G + + +Q AG RV+
Sbjct: 252 WLRDGAEPLRLIVKRMTPLASDARVAPGQVASTDEGRLVVATAGGQIALDEIQPAGKRVM 311
Query: 293 DIGDFLLGCPVIIGCIVG 310
+FL G + G G
Sbjct: 312 QAAEFLNGYGLRAGDRFG 329
>gi|113869634|ref|YP_728123.1| methionyl-tRNA formyltransferase [Ralstonia eutropha H16]
gi|113528410|emb|CAJ94755.1| Methionyl-tRNA formyltransferase [Ralstonia eutropha H16]
Length = 337
Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats.
Identities = 125/322 (38%), Positives = 167/322 (51%), Gaps = 16/322 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL- 60
LRV F GT EFA L+A+ ++ IV+V TQP RPAG RGL+ S V + A L
Sbjct: 6 PLRVAFAGTPEFARVALEAIHAAGFPIVAVLTQPDRPAG-RGLQLHASPVKQFAAASGLG 64
Query: 61 PALVPTKLGQEEYEQFLSFN---------ADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
P L P L ++ + DV VV AYGL++P +L +LG N H S
Sbjct: 65 PVLQPRSLRRQGKYPEDAAAAIDALAGTAPDVMVVAAYGLILPAEVLALPRLGCLNIHGS 124
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLPRWRGAAPI RAI AGD ETGI +M+MD+ LDTG + VPI + T L L+
Sbjct: 125 LLPRWRGAAPIHRAIEAGDAETGITLMQMDEGLDTGDMLTRAAVPIGPDDTTGTLHDTLA 184
Query: 172 VLCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
L A V A+ +L P +PQ G+TYAEKI+K E ++ R A + N +RA +
Sbjct: 185 ALGARMTVAALQELAAGRALPATPQPAEGVTYAEKIAKDEAPLDLRRPAAALANQVRAFN 244
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQR 286
PFPGA +++ + + PG V+ IAC +G A+++ LQ+
Sbjct: 245 PFPGATVQVGDTVIKCWQAVPLAAASSLPHPPGTVLAADAAGVLIACGEGSALQVTELQK 304
Query: 287 AGGRVLDIGDFLLGCPVIIGCI 308
GGR FL P+ G
Sbjct: 305 PGGRRQPAQQFLQALPLPPGTR 326
>gi|319764923|ref|YP_004128860.1| methionyl-tRNA formyltransferase [Alicycliphilus denitrificans BC]
gi|317119484|gb|ADV01973.1| methionyl-tRNA formyltransferase [Alicycliphilus denitrificans BC]
Length = 351
Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats.
Identities = 114/349 (32%), Positives = 166/349 (47%), Gaps = 42/349 (12%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+F GT EFA L+ L+++ ++ V TQP RPAG RG+K S V + A E
Sbjct: 1 MKVIFAGTPEFARVALEHLLAAGFTVPLVLTQPDRPAG-RGMKLQASPVKQCALEHGTAV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLG--------- 104
+ + AD VV AYGL++PQ +L+
Sbjct: 60 AQPRSLRLDGKYPEDAAAARAAIEATQADAMVVAAYGLILPQWVLDTMSAARPPEGEKAP 119
Query: 105 -------------------FYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLD 145
N HASLLPRWRGAAPI RAI AGD ETG+ IM+MD LD
Sbjct: 120 LGGSEPRAAGSVGAKNGLGCLNIHASLLPRWRGAAPIHRAIEAGDAETGVTIMQMDAGLD 179
Query: 146 TGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEK 205
TG + M K I+ TA L L+ + +V A++ + L +PQ G++YA K
Sbjct: 180 TGDMLLMEKTAIAPLDTTATLHDRLAQIGGRLIVLALELAVRGGLKATPQPAEGVSYAHK 239
Query: 206 ISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEV 265
I K E+++++ AE + +RA PFPGA + ++S + G +
Sbjct: 240 IEKAESQIDWSLPAEAIARRVRAFDPFPGAATRLGADAIKVWSCEIDSCQRFPDKPCGHI 299
Query: 266 I---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ + +AC G+ +R+ LQRAGG+ L DFL G + G ++G
Sbjct: 300 LHIDDAGIAVACGAGSVLRLTVLQRAGGKRLQAADFLRGFTLTPGMVLG 348
>gi|291612481|ref|YP_003522638.1| methionyl-tRNA formyltransferase [Sideroxydans lithotrophicus ES-1]
gi|291582593|gb|ADE10251.1| methionyl-tRNA formyltransferase [Sideroxydans lithotrophicus ES-1]
Length = 309
Score = 152 bits (384), Expect = 6e-35, Method: Composition-based stats.
Identities = 117/313 (37%), Positives = 179/313 (57%), Gaps = 11/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT +FA L AL+ + IV+V TQP RP+G RG+ S V + A + LP
Sbjct: 1 MKIIFAGTPQFAATALAALLQEN-QIVAVLTQPDRPSG-RGMHLAASPVKQLALQHGLPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P +E + AD+ VV AYGL++P+ +L + G N HASLLPRWRGAAP
Sbjct: 59 LQPASLKVEEVQRTIAQYEADLMVVAAYGLILPKAVLQTPRYGCLNIHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+AGD+ETGI IM+MD+ LDTG + ++ I+++ L +L+ L A ++VEA
Sbjct: 119 IQRAILAGDSETGITIMQMDEGLDTGDMLLKKRCSIAASDTAQTLHDKLAELGAQSIVEA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L+ L Q E+ TYA K++KGE R+++ + A + +R P P A+
Sbjct: 179 VRELQTGKLIPEKQEESAATYAAKLTKGEARLDWNQDAVQLERAVRGYFPSPTAFTTFGE 238
Query: 242 GNKHERIKLLESQLVEGE-GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
IK+L ++ E + +PG +I +ACS G + + LQ+ GG+ L F
Sbjct: 239 ----IPIKILRARTGEDDKAEPGTIIAVDKSRILVACSNGTLALELLQKPGGKALTAAQF 294
Query: 298 LLGCPVIIGCIVG 310
+ P+ +G +G
Sbjct: 295 VQSLPIKVGDRLG 307
>gi|169629895|ref|YP_001703544.1| methionyl-tRNA formyltransferase [Mycobacterium abscessus ATCC
19977]
gi|229487501|sp|B1MCB9|FMT_MYCA9 RecName: Full=Methionyl-tRNA formyltransferase
gi|169241862|emb|CAM62890.1| Probable methionyl-tRNA formyltransferase [Mycobacterium abscessus]
Length = 307
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 98/307 (31%), Positives = 155/307 (50%), Gaps = 9/307 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT A+ +L+ L++S H +V+V T+P AG RG S S V A+E +
Sbjct: 1 MRIVFAGTPAPALPSLERLLASRHEVVAVLTRPDARAG-RGRASASSPVAALAREHGVAV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + + E+ + L+ + D VVAYG ++ +L +LG+ N H SLLP WRGAAP
Sbjct: 60 LTPARPNEPEFVRELAQLDVDCCAVVAYGALLKPELLAVPRLGWVNLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q +I AGD TG ++ LD+GPV + IS N L L+ A +
Sbjct: 120 VQASIAAGDEITGATTFLIEPALDSGPVYGVVTERISPNDTAGALLGRLAESGAGLLEST 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
MD +E L PQ +G++ A KI+ + R+ + A + HIRA++P PGAW +
Sbjct: 180 MDGIEDGALVAVPQAVDGVSIAPKITVEQARIRWELPAHAIDRHIRAMTPEPGAWTNIGG 239
Query: 242 GNKHERIKLLESQLV-EGEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
R+K+ + + + PG V + + A+ + +Q G +V+ D+
Sbjct: 240 T----RVKVGPVGVATDEQLPPGAVAVRKRDVLVGTGTTAIALDEVQPQGKKVMKAADWA 295
Query: 299 LGCPVII 305
G +
Sbjct: 296 RGARLDA 302
>gi|171743359|ref|ZP_02919166.1| hypothetical protein BIFDEN_02490 [Bifidobacterium dentium ATCC
27678]
gi|283455670|ref|YP_003360234.1| Methionyl-tRNA formyltransferase [Bifidobacterium dentium Bd1]
gi|171278973|gb|EDT46634.1| hypothetical protein BIFDEN_02490 [Bifidobacterium dentium ATCC
27678]
gi|283102304|gb|ADB09410.1| fmt Methionyl-tRNA formyltransferase [Bifidobacterium dentium Bd1]
Length = 321
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 90/314 (28%), Positives = 152/314 (48%), Gaps = 14/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVS--SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
L+V+F G+ E AV +L+ L +V+V T+P P G RG K V + V + A E L
Sbjct: 2 LKVLFAGSPEVAVPSLRMLAEDTEHFEVVAVLTRPDAPTG-RGRKLVPNPVKQAALELGL 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + + + A A VVAYG ++ Q +L+A +G+YN H SLLP+WRGAA
Sbjct: 61 PVIESDPSEETFINELTATGAQAAAVVAYGKILKQEVLDALPMGWYNLHFSLLPQWRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QR+I AGD TG + ++ + +D GP+ V I ++ + L L+ + +
Sbjct: 121 PVQRSIWAGDTLTGATVFRIVRKMDAGPILAQSTVEIGAHETSGELLNRLAEDGSRLLAA 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L + + Q A+KI+ + R+ F A V IRA +P PGAW E+
Sbjct: 181 SLQALADDQIAPVEQPAGAYEIAQKITVEDARIRFDVPAFAVDRQIRACTPNPGAWCELH 240
Query: 241 IGNKHERI--KLLESQLVE-------GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGG 289
E +L +Q + +PG ++ + I + + ++ ++ G
Sbjct: 241 ASADAEPTTLHVLRAQTSDMDNPNVPATLEPGRIVAGKKHVWIGTATQPLELLEVKAQGK 300
Query: 290 RVLDIGDFLLGCPV 303
+ + D+ G +
Sbjct: 301 KAMRAADWARGARL 314
>gi|306823303|ref|ZP_07456679.1| methionyl-tRNA formyltransferase [Bifidobacterium dentium ATCC
27679]
gi|309801930|ref|ZP_07696045.1| methionyl-tRNA formyltransferase [Bifidobacterium dentium
JCVIHMP022]
gi|304553935|gb|EFM41846.1| methionyl-tRNA formyltransferase [Bifidobacterium dentium ATCC
27679]
gi|308221486|gb|EFO77783.1| methionyl-tRNA formyltransferase [Bifidobacterium dentium
JCVIHMP022]
Length = 321
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 90/314 (28%), Positives = 152/314 (48%), Gaps = 14/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVS--SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
L+V+F G+ E AV +L+ L +V+V T+P P G RG K V + V + A E L
Sbjct: 2 LKVLFAGSPEVAVPSLRMLAEDTEHFEVVAVLTRPDAPTG-RGRKLVPNPVKQAALELGL 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + + + A A VVAYG ++ Q +L+A +G+YN H SLLP+WRGAA
Sbjct: 61 PVIESDPSEETFINELTATGAQAAAVVAYGKILKQEVLDALPMGWYNLHFSLLPQWRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QR+I AGD TG + ++ + +D GP+ V I ++ + L L+ + +
Sbjct: 121 PVQRSIWAGDTLTGATVFRIVRKMDAGPILAQSTVEIGAHETSGELLNRLAEDGSRLLAA 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L + + Q A+KI+ + R+ F A V IRA +P PGAW E+
Sbjct: 181 SLQALADDQIAPVEQPAGAYEIAQKITVEDARIRFDVPAFAVDRQIRACTPNPGAWCELH 240
Query: 241 IGNKHERI--KLLESQLVE-------GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGG 289
E +L +Q + +PG ++ + I + + ++ ++ G
Sbjct: 241 ASADAEPTTLHVLRAQTADMDNPNAPATLEPGRIVAGKKHVWIGTATQPLELLEVKAQGK 300
Query: 290 RVLDIGDFLLGCPV 303
+ + D+ G +
Sbjct: 301 KAMRAADWARGARL 314
>gi|255325043|ref|ZP_05366149.1| methionyl-tRNA formyltransferase [Corynebacterium
tuberculostearicum SK141]
gi|255297608|gb|EET76919.1| methionyl-tRNA formyltransferase [Corynebacterium
tuberculostearicum SK141]
Length = 315
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 99/311 (31%), Positives = 147/311 (47%), Gaps = 19/311 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E AV L+ L++SSH +V+V T+P G RG S V AQE +
Sbjct: 1 MRIIFAGTPEPAVVALEKLLASSHEVVAVITRPDAKKG-RGRTLHPSPVKALAQEHGIEV 59
Query: 63 LVPTKLGQEEYEQF------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
L PT L + + + VVAYG ++ + +L + G+ N H SLLP W
Sbjct: 60 LTPTTLRPDSEDGQALRARLKELQPEAIPVVAYGNLVTKDLLELPQHGWVNLHFSLLPAW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAP+Q AI AGD+ TG + ++++ LDTGPV I L L+
Sbjct: 120 RGAAPVQAAIAAGDDVTGASTFRIEEGLDTGPVLGTVTEEIKGTDTADDLLTRLAYSGGD 179
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+V MD L L PQ TYA KIS + RV + + + HIRA +P PGAW
Sbjct: 180 LLVATMDGLAAGQLEAQPQQGE-ATYAPKISTAQARVEWAQPDFAIDRHIRAHTPGPGAW 238
Query: 237 LEMMIGNKHERIKLLESQLVEGEG-----KPGE--VINPNFTIACSQGAVRIMRLQRAGG 289
R+K+ +E +PG+ + I V++ ++Q G
Sbjct: 239 T----MWDEARVKIGPVSRIEEAAVPQELEPGQLHIAKKAVFIGTGSQPVQLGKIQPPGK 294
Query: 290 RVLDIGDFLLG 300
++++ D+ G
Sbjct: 295 KMMNAADWARG 305
>gi|213965591|ref|ZP_03393785.1| methionyl-tRNA formyltransferase [Corynebacterium amycolatum SK46]
gi|213951750|gb|EEB63138.1| methionyl-tRNA formyltransferase [Corynebacterium amycolatum SK46]
Length = 324
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 105/322 (32%), Positives = 154/322 (47%), Gaps = 27/322 (8%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R++F GT E AV L+ L+ S H IV+V T+P G RG S V A E +P
Sbjct: 1 MRLIFAGTPEPAVVALKKLLEDSHHEIVAVLTRPDARRG-RGKSLSPSPVKALALEHDIP 59
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L PT +E +Q NAD VVAYG ++P+ +L+ G+ N H SLLP WRGAA
Sbjct: 60 VLTPTTLRDEEIQQQIRELNADCIPVVAYGNLVPEELLDVPTHGWVNLHFSLLPTWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG + +++K LDTGPV I N L L+ A +
Sbjct: 120 PVQAAIAAGDEVTGASTFRIEKGLDTGPVFGTVTEAIRPTDNADDLLTRLAYSGADLLAA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L + Q E ++YA K + R+ + + + RA +P PGAW +
Sbjct: 180 TMDGIEAGALRPTAQPEQDVSYAAKFGPEDARIIWTQPRHLLDRRARAFTPAPGAWTTLD 239
Query: 241 IGNKHERIKLLESQLVEGE------------------GKPGE--VINPNFTIACSQGAVR 280
R+K+ E + E PGE V ++ C+ G V+
Sbjct: 240 GS----RLKVGELTPLSDEDSAAVEEVRKAADPEAAAATPGELVVEKHRVSVRCADGYVQ 295
Query: 281 IMRLQRAGGRVLDIGDFLLGCP 302
++++Q G +++D D+ G
Sbjct: 296 LVKVQPQGKKMMDASDWARGSQ 317
>gi|257055598|ref|YP_003133430.1| methionyl-tRNA formyltransferase [Saccharomonospora viridis DSM
43017]
gi|256585470|gb|ACU96603.1| methionyl-tRNA formyltransferase [Saccharomonospora viridis DSM
43017]
Length = 307
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 108/310 (34%), Positives = 156/310 (50%), Gaps = 12/310 (3%)
Query: 7 FMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
F GT AV +L+AL+ S H +V+V T+P PAG RG K S V + A E + L P
Sbjct: 2 FAGTPAPAVPSLRALLDSPRHEVVAVVTRPDAPAG-RGRKLSRSPVGELADEHGIEVLTP 60
Query: 66 TKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
+ G E++ LS D VVAYG ++P+ L + G+ N H SLLP WRGAAP+Q
Sbjct: 61 RRAGDEDFLARLSELAPDACPVVAYGALLPRSALAVPRHGWINLHFSLLPAWRGAAPVQA 120
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
AI AGD TG + ++ LD GPV I L L+ A ++ +D
Sbjct: 121 AIKAGDEITGASTFRIVPELDAGPVYGTVTERIRPTDTAGELLDRLAKSGAELLLSTLDG 180
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
+E + PQ +G+TYA K++ + RVNF A V HIR+++P PGAW E +
Sbjct: 181 IEDGTVQAVPQPADGVTYAPKVTVDDARVNFAEPALAVDRHIRSVTPEPGAWAEF----R 236
Query: 245 HERIKLLESQLVEGE---GKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+R+KL +L +GE PGE V + + V + +Q G + + D+
Sbjct: 237 GQRLKLGPVRLGDGEYEGLAPGELVVERRRVLVGTATTPVVLGEVQAQGKKRMAATDWAR 296
Query: 300 GCPVIIGCIV 309
G + G +
Sbjct: 297 GTRIEQGERL 306
>gi|227878883|ref|ZP_03996788.1| methionyl-tRNA formyltransferase FMT [Lactobacillus crispatus
JV-V01]
gi|227861517|gb|EEJ69131.1| methionyl-tRNA formyltransferase FMT [Lactobacillus crispatus
JV-V01]
Length = 308
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 93/308 (30%), Positives = 163/308 (52%), Gaps = 13/308 (4%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +F+V L+ L+ + I +V TQP + G R K S A++ LP P K
Sbjct: 1 MGTPKFSVPVLEGLIDEGYEIKAVVTQPDKKVG-RKQKITKSPAKIAAEKHDLPIFQPVK 59
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
G +E ++ + +AD+ V AYG +P + LN+ K+ N H SLLP++RG APIQ ++
Sbjct: 60 LSGSDEMQKLIDMHADLIVTAAYGQFLPTKFLNSVKIAAVNVHGSLLPKYRGGAPIQYSL 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ GD ETGI IM+M K +D G + + I + N L +LS++ +++ + +
Sbjct: 120 INGDKETGITIMEMVKKMDAGDIYAQEAIKIEPDDNAGTLFSKLSIVGRDLLLKTLPAII 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
++ PQ + ++ I+K + ++N +AE V++ IRAL+P PGA+L + +
Sbjct: 180 DGSIKKVPQDPEKVVFSPNITKEQEKLNVDMTAEEVNDMIRALNPDPGAYLMIEG----K 235
Query: 247 RIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFLL-- 299
R K+ ++++ G V+ F I+ + + + ++ +Q +G + +DI FL
Sbjct: 236 RFKIWKAEIASDSSSLNAGSVVANKGRFAISFADNSVLNLLEVQPSGKKRMDIKSFLNGQ 295
Query: 300 GCPVIIGC 307
G + G
Sbjct: 296 GSKFVPGE 303
>gi|78188465|ref|YP_378803.1| methionyl-tRNA formyltransferase [Chlorobium chlorochromatii CaD3]
gi|123770884|sp|Q3ATB5|FMT_CHLCH RecName: Full=Methionyl-tRNA formyltransferase
gi|78170664|gb|ABB27760.1| methionyl-tRNA formyltransferase [Chlorobium chlorochromatii CaD3]
Length = 314
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 150/312 (48%), Gaps = 6/312 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVS--SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+R++ MGT +FAV +LQA+ + + IV V T +P + + S + + A +L
Sbjct: 1 MRIIVMGTPDFAVPSLQAIAAMGNGFDIVLVVTGQDKPRKSKHAAAEASPIKQAALALNL 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + + ++ +VVA ++P + + +LG +N HASLLP +RGAA
Sbjct: 61 PVHEVDDVNDPHFAEIVAAYKPDVIVVAAFRILPPAVYSQARLGAFNLHASLLPAYRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ AIM G+ ETG+ + + +DTG + +K I+ N L L+ + A +VE
Sbjct: 121 PVNWAIMNGEEETGVTTFFLQQRVDTGTIIMQQKTAIAPEENATELIVRLANIGADVVVE 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ N +PQ ++ + A K+++ TR+N+ + +HN IR L+ P AW
Sbjct: 181 TLRRIAAKNAATAPQDDSLASRAPKLTRINTRINWEQPVATLHNFIRGLALKPSAWTTFN 240
Query: 241 IGNKHERIKLLESQLVEGEGKP-GE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
L + + P G V + + S G + ++ LQ G + ++ DF
Sbjct: 241 DKTLKIFRTTLSTPEHDHPSAPAGSLLVSHGKLYVHGSDGWLELLALQLEGRKPMEAADF 300
Query: 298 LLGCPVIIGCIV 309
G V G +
Sbjct: 301 ARGLHVE-GEAL 311
>gi|319442114|ref|ZP_07991270.1| hypothetical protein CvarD4_10165 [Corynebacterium variabile DSM
44702]
Length = 326
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 99/323 (30%), Positives = 147/323 (45%), Gaps = 25/323 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++F GT E A TLQ L+ H +V+V TQP G RG S V + A+ +P
Sbjct: 1 MKILFAGTPEPAAVTLQYLLDDPAHEVVAVLTQPDAKRG-RGRSLHPSKVAQVAEAAGVP 59
Query: 62 ALVPTK---------LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
+E + + D VVAYG ++P +L+ + G+ N H SL
Sbjct: 60 VHKWASLKASAEDAGEIREVLRGYAADGVDAVAVVAYGQILPADVLDIFRHGWINLHFSL 119
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAP+Q AI AGD TG ++ LD GPV + P+ L L+
Sbjct: 120 LPRWRGAAPVQAAIAAGDRVTGATTFRIVPALDAGPVTGTVEEPVGLEDTADDLLTRLTY 179
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ E++ L ++ Q E G+TYA KI+ + RV++ R A + RA P
Sbjct: 180 AGRVLLAESLTGLGSGDVTPVEQPEEGMTYAAKITTADARVDWARPAVEIQRVTRAHLPA 239
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEGEGKP----GEVI--NPNFTIACSQGAVRIMRLQR 286
PG W + ER KL V+GE P GE++ + G + I R+Q
Sbjct: 240 PGPWTTL----DGERYKLGLLLPVDGEETPVLTAGEILAEKSRVLVGAGDGVLEITRIQP 295
Query: 287 AGGRVLDIGDFLLGCPVIIGCIV 309
G +++ D+ G G +
Sbjct: 296 PGKKMMAAADWARGR----GDLF 314
>gi|156315058|ref|XP_001617930.1| hypothetical protein NEMVEDRAFT_v1g156333 [Nematostella vectensis]
gi|156196541|gb|EDO25830.1| predicted protein [Nematostella vectensis]
Length = 323
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 95/312 (30%), Positives = 160/312 (51%), Gaps = 21/312 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L+++F GT + L+ ++++ ++ V TQP RPA RG K S V + A + +
Sbjct: 5 LKIIFAGTPGISETVLKNILNNKFNVELVLTQPDRPA-NRGKKITQSPVKELALKHDIEV 63
Query: 63 LVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P + + + D+ VVVAYGL++PQ +L+ KLG N H SLLP++RGAA
Sbjct: 64 IQPELVKNNHELFARIKHLQPDIMVVVAYGLILPQELLDIPKLGCINIHVSLLPKYRGAA 123
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI+A + TG+ I+KMD +DTG + +++ I S + L +L+ L A +V+
Sbjct: 124 PIQRAILANEKVTGVTIIKMDSGMDTGDILMQQELKIESTETSGTLHDKLANLGALMIVD 183
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ E + Q E ++YA KI K E +N+ + + IR +P PG + +
Sbjct: 184 YLANHENYPVK--KQDEVNVSYAPKIEKKEAHINWNEDSHIIERKIRGFNPVPGCFTFLD 241
Query: 241 IGNKHERIKLLESQLVEGEG--------KPGEVIN---PNFTIACSQGA-VRIMRLQRAG 288
IK+ ++ ++ + KPG ++N + C + + I +LQ AG
Sbjct: 242 ESL----IKIWQADSIDNKNKDYLSIGIKPGTIVNITGVGLIVLCGNNSLLLITKLQVAG 297
Query: 289 GRVLDIGDFLLG 300
+ D++ G
Sbjct: 298 KKAQSAKDYVHG 309
>gi|257455154|ref|ZP_05620392.1| methionyl-tRNA formyltransferase [Enhydrobacter aerosaccus SK60]
gi|257447487|gb|EEV22492.1| methionyl-tRNA formyltransferase [Enhydrobacter aerosaccus SK60]
Length = 342
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 114/333 (34%), Positives = 165/333 (49%), Gaps = 26/333 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS----SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
LRVVF GT EFA LQAL+S + IV+VYTQP R +G RG K S V A
Sbjct: 9 PLRVVFAGTPEFAKVALQALISHQKTLNIDIVAVYTQPDRKSG-RGQKISASPVKALALA 67
Query: 58 FSLPALVPTKLGQEEYEQFLS------FNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
++ P + + +S + DV VV AYGL++P +L+ K G N H S
Sbjct: 68 NNIAVEQPESFSLKSADGIVSRETLKRYRPDVMVVAAYGLILPLGVLHTPKFGCINIHGS 127
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLPRWRGAAPIQRAI+AGD+ TGI IM+M + LDTG + + + PI+ T L +L+
Sbjct: 128 LLPRWRGAAPIQRAILAGDDTTGITIMQMAQGLDTGDMLYKIECPITDTDTTQLLHDKLA 187
Query: 172 VLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
L A+V + L+ Q + YAEKI+ E +N+ A ++ IRAL+
Sbjct: 188 KLGGEAIVTVLSDLKNYQQNAQKQDDALANYAEKITTAEGEINWQNDAISIQRQIRALNA 247
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKP-GEVINPN---FTIACSQGA--------- 278
F ++ + IK +L + +P G++++ +AC + A
Sbjct: 248 FTYLDEHKDPNSRIKIIKAAPIKLDQQTHEPAGKIVSVGRNAILVACGKNASNHQHQGVQ 307
Query: 279 --VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ I ++Q GG+ L G + G I
Sbjct: 308 HLINITQMQWPGGKPLTAEQIANGDKLNDGDIF 340
>gi|296161363|ref|ZP_06844170.1| methionyl-tRNA formyltransferase [Burkholderia sp. Ch1-1]
gi|295888349|gb|EFG68160.1| methionyl-tRNA formyltransferase [Burkholderia sp. Ch1-1]
Length = 328
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 126/323 (39%), Positives = 174/323 (53%), Gaps = 19/323 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT EFA A L A+ + + V TQP RPAG RG+K S V + AQE L
Sbjct: 4 SLRVIFAGTPEFAAAALAAIHGAGFPVPLVLTQPDRPAG-RGMKLQTSPVKRYAQEHGLA 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L+ LG N HASL
Sbjct: 63 VAQPPSLRRAGKYPEEAAAAIGQLRATPHDVMVVAAYGLILPQEVLDIPPLGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD ETGI +M+MD LDTG + + IS + TA L L+
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGITLMQMDVGLDTGAMISETRTAISGDDTTATLHDRLAQ 182
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +VEA+ +LE+ +PQ +G+TYAEKI K E +++ R A + +RA P
Sbjct: 183 DGAKLIVEALIELERTGRLAATPQPADGVTYAEKIGKHEAALDWRRPAAVLARQVRAFDP 242
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGE--GKPGEVIN---PNFTIACSQGAVRIMRLQR 286
FPG + G K+ + + + G PG + +AC +GA+R+ +LQ+
Sbjct: 243 FPGGVGTLEDGTSI---KIWGAIPADTKAGGAPGTIAEVTPEGVVVACGEGALRLTQLQK 299
Query: 287 AGGRVLDIGDFLLGCPVIIGCIV 309
GG+ L + +FL G + +G
Sbjct: 300 PGGKRLPVREFLAGSALAVGQRF 322
>gi|262373878|ref|ZP_06067156.1| methionyl-tRNA formyltransferase [Acinetobacter junii SH205]
gi|262311631|gb|EEY92717.1| methionyl-tRNA formyltransferase [Acinetobacter junii SH205]
Length = 320
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 110/320 (34%), Positives = 168/320 (52%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL+ + H I++VYTQP R +G RG K S V + A E LP
Sbjct: 1 MKIIFAGTPEFAATALAALLKTPHQIIAVYTQPDRKSG-RGQKLTPSPVKQLALEHGLPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + DV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 FQPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQTVLDMPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD ETGI IM+M LDTG + + PI++ +A L +L+ A
Sbjct: 120 RGAAPIQRAIATGDAETGITIMQMAAGLDTGDMMYKTYCPITAEDTSATLHDKLATQGAE 179
Query: 177 AMVE---AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ + L+ Q E+ YA K+ K E R+++ ++A + +IRA +P+P
Sbjct: 180 AICTVLESEQSLQSFIAKREVQDESLTVYAHKLVKSEARIDWTQTAIQIDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVR-IMRLQRAGG 289
A++++ N + S++ + + GE++ +AC + +V + LQ +GG
Sbjct: 240 VAFIQLDENNALRVWSSMPSEISKANAQLGEILAIDKQGVHVACGENSVVCLTSLQWSGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ L+ + +G I+
Sbjct: 300 KALNAVQIAQTQKLHLGQIL 319
>gi|227503565|ref|ZP_03933614.1| methionyl-tRNA formyltransferase [Corynebacterium accolens ATCC
49725]
gi|227075601|gb|EEI13564.1| methionyl-tRNA formyltransferase [Corynebacterium accolens ATCC
49725]
Length = 313
Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats.
Identities = 108/309 (34%), Positives = 155/309 (50%), Gaps = 17/309 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E AV L+ L++SSH +V+V T+P G RG S V AQE +
Sbjct: 1 MRIIFAGTPEPAVVALEKLLASSHEVVAVITRPDAKKG-RGRSLHPSPVKALAQEHGIEV 59
Query: 63 LVPTKLGQEEYEQFL------SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
L PT L + + VVAYG +I + +L+ + G+ N H SLLP W
Sbjct: 60 LTPTTLRPGTEDGDNLRERLAELQPEAIPVVAYGNLISKDLLDVARHGWVNLHFSLLPAW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAP+Q AI AGD+ TG + ++++ LDTGPV I+ L L+ A
Sbjct: 120 RGAAPVQAAIAAGDDITGASTFRIEEGLDTGPVFGTVTEAITGTDTADDLLTRLAYSGAD 179
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+V MD LE L Q TYA KIS R+++ + A ++ HIRA +P PGAW
Sbjct: 180 LLVATMDGLEAGTLEPQAQSGE-ATYAPKISTAAARIDWAQPAFSIDRHIRAHTPGPGAW 238
Query: 237 LEMMIGNKHERIKLLESQLVEGEGK---PGE--VINPNFTIACSQGAVRIMRLQRAGGRV 291
+ R+KL L EG GK PGE + I + V++ R+Q G ++
Sbjct: 239 TLLDDA----RLKLGPVSLTEGIGKQLHPGEALISKDAVYIGTATQPVQLDRIQPPGKKM 294
Query: 292 LDIGDFLLG 300
++ D+ G
Sbjct: 295 MNAADWARG 303
>gi|119963872|ref|YP_947574.1| methionyl-tRNA formyltransferase [Arthrobacter aurescens TC1]
gi|166214870|sp|A1R5R2|FMT_ARTAT RecName: Full=Methionyl-tRNA formyltransferase
gi|119950731|gb|ABM09642.1| methionyl-tRNA formyltransferase [Arthrobacter aurescens TC1]
Length = 306
Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats.
Identities = 85/300 (28%), Positives = 142/300 (47%), Gaps = 6/300 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT AV +L ALV + +V+V T+P P G R S V +A E +
Sbjct: 1 MRVLFAGTPAVAVPSLDALVKAGFDVVAVLTRPDAPVG-RKRVLTPSPVAARAMELGIDV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ ++ + + DVA +VAYG ++P+ L G+ N H SLLP WRGAAP+
Sbjct: 60 IRAARVDADTTAGIAKYAPDVAAIVAYGGIVPKAALGVPTHGWVNLHFSLLPAWRGAAPV 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QR+I+AGD+ TG A ++++ LDTGPV + L + LS+ A + + +
Sbjct: 120 QRSIIAGDDVTGAATFQLEEGLDTGPVFGTLTETVRPEDTAGDLLERLSISGAVLLSQTL 179
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
++ PQI + R+++ + A ++ R ++P PGAW +
Sbjct: 180 SAIDAGQAAPQPQIGEVSHAPKLTLDDG-RLDWQQPALALNRRARGVTPEPGAWTTLDGQ 238
Query: 243 NKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
L ++ + PG + + + AV + R+Q AG +++ D+ G
Sbjct: 239 RVKLEPVALRPEV--KDLPPGSIRVDGKSVLVGTGSHAVELGRVQPAGKKMMPPADWARG 296
>gi|83855041|ref|ZP_00948571.1| methionyl-tRNA formyltransferase [Sulfitobacter sp. NAS-14.1]
gi|83842884|gb|EAP82051.1| methionyl-tRNA formyltransferase [Sulfitobacter sp. NAS-14.1]
Length = 289
Score = 152 bits (383), Expect = 8e-35, Method: Composition-based stats.
Identities = 137/292 (46%), Positives = 174/292 (59%), Gaps = 8/292 (2%)
Query: 19 QALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK-LGQEEYEQFL 77
ALV + H I +VY QPPRPAG RG K S V ++A+ L P E +F
Sbjct: 2 DALVLAGHEIAAVYCQPPRPAG-RGKKDRPSPVQQRAEALGLLVRHPVSLKTAEAQAEFA 60
Query: 78 SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAI 137
+ ADVAVVVAYGL++PQ +L+A K G N HASLLPRWRGAAPI RAIMAGD ETG+ I
Sbjct: 61 ALGADVAVVVAYGLILPQAVLDAPKSGCLNIHASLLPRWRGAAPIHRAIMAGDVETGVCI 120
Query: 138 MKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIE 197
M+M+ LDTGPV PI + T L LS + A +VEA+ L PQ E
Sbjct: 121 MQMEAGLDTGPVLLRAATPIRTTETTIELHDRLSAMGAELIVEALRHLPDL--QPEPQPE 178
Query: 198 NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVE 257
G+TYA KI K E R+++ R A V IR LSPFPGAW ++ R+K+L S+L E
Sbjct: 179 EGVTYASKIDKAEARIDWSRPATEVDRQIRGLSPFPGAWFDLDGT----RVKVLASKLAE 234
Query: 258 GEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
GEG GEV++ + C +GAV+++RLQRAG D F G + G ++
Sbjct: 235 GEGAAGEVLDDTLRVGCGEGAVQLIRLQRAGKAAQDAQTFQRGAQIAAGTVL 286
>gi|296269347|ref|YP_003651979.1| methionyl-tRNA formyltransferase [Thermobispora bispora DSM 43833]
gi|296092134|gb|ADG88086.1| methionyl-tRNA formyltransferase [Thermobispora bispora DSM 43833]
Length = 309
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 103/312 (33%), Positives = 154/312 (49%), Gaps = 11/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+ +L+AL+ S H +V+V T+P P+G RG S V + A+E L
Sbjct: 1 MRLVFAGTPETALPSLRALLGSPRHEVVAVVTRPDAPSG-RGRHVHPSPVARLAEEAGLE 59
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K + D VVAYG ++PQ L+ G+ N H S+LP WRGAA
Sbjct: 60 VLKPAKASDPVFLDRLREIGPDCCAVVAYGALLPQAALDIPPHGWINLHFSVLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI+ GD TG ++ K LD GPV + I + + L + L+ A ++
Sbjct: 120 PVQHAILHGDEITGATTFRIVKELDAGPVYGVLTEQIRPDDTSGTLLERLAEAGAGLLLA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D +E L PQ +G++YA KI + RV++ A V IRA +P PGAW
Sbjct: 180 TLDGIEDGTLVARPQPADGVSYAPKIEPEDARVDWTAPAMRVDRLIRACTPAPGAWTTFR 239
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVINPNFTIACSQGAV--RIMRLQRAGGRVLDIGD 296
G R+KL +L G+ PGE+ T+ G + + +Q G R++ +
Sbjct: 240 GG----RLKLGPVRLAPEAGELAPGELRATKTTVLAGTGTIPVELGEVQPQGKRMMTAAE 295
Query: 297 FLLGCPVIIGCI 308
+ G +
Sbjct: 296 WARGVRITERDR 307
>gi|225350753|ref|ZP_03741776.1| hypothetical protein BIFPSEUDO_02322 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225158209|gb|EEG71451.1| hypothetical protein BIFPSEUDO_02322 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 320
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 86/314 (27%), Positives = 150/314 (47%), Gaps = 14/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVS--SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
L+V+F GT + AV +L+ L +V+V T+P P G RG K V + V + A + L
Sbjct: 2 LKVLFAGTPDVAVPSLKMLAEDTERFEVVAVLTRPDAPTG-RGRKLVPNPVKQAALDLGL 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + + + A A VVAYG ++ Q +L+A +G+YN H SLLP+WRGAA
Sbjct: 61 PVIESDPSEETFISELAATGAQAAAVVAYGKILKQDVLDALPMGWYNLHFSLLPQWRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QR+I AG+ TG + ++ + +D GP+ V I ++ L L+ + +
Sbjct: 121 PVQRSIWAGEKVTGATVFRIVRAMDAGPILAQSTVEIGAHETAGELLNRLAEDGSRLLAA 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ + + + Q A+KI+ + + F V IRA +P PGAW E+
Sbjct: 181 SLQAMADDQIAPVEQPAGAYEVAQKITVEDAHIRFDIPVFAVDRQIRACTPNPGAWCELH 240
Query: 241 IGNKHERI--KLLESQLVEGEG-------KPGEVI--NPNFTIACSQGAVRIMRLQRAGG 289
+ E +L +Q + +PG ++ N + S + ++ ++ G
Sbjct: 241 ANAEAEPATLHVLRAQGADMSNPNTPVSLEPGRIVAGKKNVWVGTSSDPLELLEVKAQGK 300
Query: 290 RVLDIGDFLLGCPV 303
+ + D+ G +
Sbjct: 301 KAMRAADWARGAHL 314
>gi|262277955|ref|ZP_06055748.1| methionyl-tRNA formyltransferase [alpha proteobacterium HIMB114]
gi|262225058|gb|EEY75517.1| methionyl-tRNA formyltransferase [alpha proteobacterium HIMB114]
Length = 296
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 96/304 (31%), Positives = 164/304 (53%), Gaps = 12/304 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ FMGT FAV L+ ++ + +V+TQPPR + +RG+K + S VH+ + + +L
Sbjct: 1 MKIAFMGTPSFAVPALKK-INEVFKVDTVFTQPPRKS-KRGMKELSSQVHEISNQLNLDV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P +L + + V V ++ + + F N HASLLP WRGAAPI
Sbjct: 59 RTPNRLNDDLEFFKSKKFSLVVVAAYGQIIPDDFL---KECLFINIHASLLPSWRGAAPI 115
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QR++M D TGI+IMK++K LD+GPV + +PI+ ++ +LS + + +V+A+
Sbjct: 116 QRSLMNKDKSTGISIMKIEKELDSGPVLLKQSLPINIYSKYGDVEHKLSEIGSDLIVKAI 175
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + + Q N TYA+KI+K + ++ + AE V I AL+P PG++ +
Sbjct: 176 ELINEGKYEFKEQNHNLKTYAKKITKEDEKIIWNMEAETVVARIHALAPSPGSYFDY--- 232
Query: 243 NKHERIKLLESQLVEGEG-KPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+E++K+ E +L + KPG + ++ IAC + I+ +Q+ G I +FL
Sbjct: 233 -NNEKLKIFECKLSDKIAEKPGHIHIVDERLFIACKDKYIEILEIQKPGKNKQKIKEFLK 291
Query: 300 GCPV 303
G
Sbjct: 292 GYKF 295
>gi|73543089|ref|YP_297609.1| methionyl-tRNA formyltransferase [Ralstonia eutropha JMP134]
gi|72120502|gb|AAZ62765.1| methionyl-tRNA formyltransferase [Ralstonia eutropha JMP134]
Length = 331
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 126/323 (39%), Positives = 174/323 (53%), Gaps = 16/323 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL- 60
+LRV F GT EFA L+A+ ++ + +V+V +QP RPAG RG++ S V + A +L
Sbjct: 6 SLRVAFAGTPEFARVALEAIHAAGYPVVAVLSQPDRPAG-RGMQLQASPVKQYAVANALE 64
Query: 61 PALVPTKLGQEEYEQFLS---------FNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
P L P L + + DV VV AYGL++P +L +LG N HAS
Sbjct: 65 PVLQPRSLRRTGKYPEDAATAIDALAQTAPDVMVVAAYGLILPAEVLTLPRLGCLNIHAS 124
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLPRWRGAAPI RAI AGD ETGI +M+MD+ LDTG + VPI+++ +T L +L+
Sbjct: 125 LLPRWRGAAPIHRAIEAGDAETGITLMQMDEGLDTGAMLSREAVPIAADDSTGSLHDKLA 184
Query: 172 VLCAHAMVEAM-DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
L +VEA+ LP +PQ E GITYAEKI K E ++ R A + + +RA +
Sbjct: 185 ALGGRMIVEALRKLAAGETLPATPQPEAGITYAEKIGKDEAPLDLRRPAAELASQVRAFN 244
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQR 286
PFPGA L++ + S G V+ IAC G A+++ LQ+
Sbjct: 245 PFPGATLQLDNTVIKCWQAVPLSAGTSLPHPAGTVLASDASGVIIACGNGSALQVTELQK 304
Query: 287 AGGRVLDIGDFLLGCPVIIGCIV 309
GGR FL G P++ G
Sbjct: 305 PGGRRQPAQQFLQGTPLLPGTRF 327
>gi|149925344|ref|ZP_01913608.1| methionyl-tRNA formyltransferase [Limnobacter sp. MED105]
gi|149825461|gb|EDM84669.1| methionyl-tRNA formyltransferase [Limnobacter sp. MED105]
Length = 327
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 133/322 (41%), Positives = 176/322 (54%), Gaps = 16/322 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TL V F GT EFA L L+++ + + V TQP RPAG RG+K S V + A E LP
Sbjct: 4 TLNVGFAGTPEFARVALAKLIAAGYPVHLVLTQPDRPAG-RGMKLQASPVKQLALEHGLP 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
L P L + E + DV +V AYGL++PQ +L+A +LG N H SL
Sbjct: 63 VLQPASLKKGEEAEHALNALKTAAHGQTLDVLIVAAYGLILPQTVLDAPRLGCLNIHGSL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPIQR I AGD ETG+ IM+M+ LDTGPV R +PI T L +L+
Sbjct: 123 LPRWRGAAPIQRCIEAGDAETGVCIMQMEAGLDTGPVRLWRSLPIEHTDTTTTLHDKLAD 182
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
L +VEA+D L LPL PQ E G+TYAEKI+K E +N+ RSA + +RA PF
Sbjct: 183 LGGDLLVEALDSLASGTLPLVPQPEVGVTYAEKITKAEGVINWHRSAVELQRTLRAFDPF 242
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACSQGAVRIMRLQRAG 288
PGA + + E+ ++ G G+PGEV+ + + C QG +RI LQ+AG
Sbjct: 243 PGANTVWGS--EPLKCFDPETVVLAGLMGQPGEVLSVDSSGIEVQCGQGVLRIRTLQKAG 300
Query: 289 GRVLDIGDFLLGCPVIIGCIVG 310
+ + G +G
Sbjct: 301 SKRQPAQQVAQALGLQAGNQLG 322
>gi|306836176|ref|ZP_07469160.1| methionyl-tRNA formyltransferase [Corynebacterium accolens ATCC
49726]
gi|304567897|gb|EFM43478.1| methionyl-tRNA formyltransferase [Corynebacterium accolens ATCC
49726]
Length = 313
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 106/309 (34%), Positives = 154/309 (49%), Gaps = 17/309 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E AV L+ L++SSH +V+V T+P G RG S V AQE +
Sbjct: 1 MRIIFAGTPEPAVVALEKLLASSHEVVAVITRPDAKKG-RGRSLHPSPVKALAQEHGIEV 59
Query: 63 ------LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
T+ G ++ + VVAYG +I + +L+ + G+ N H SLLP W
Sbjct: 60 LTPATLRPGTEDGDNLRQRLAELQPEAIPVVAYGNLISKDLLDVARHGWVNLHFSLLPAW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAP+Q AI AGD+ TG + ++++ LDTGPV I+ L L+ A
Sbjct: 120 RGAAPVQAAIAAGDDITGASTFRIEEGLDTGPVFGTVTEGITGTDTADDLLTRLAYSGAD 179
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+V MD LE L Q TYA KIS R+++ + A + HIRA +P PGAW
Sbjct: 180 LLVATMDGLEAGTLEPQAQSGE-ATYAPKISTAAARIDWAQPAFAIDRHIRAHTPGPGAW 238
Query: 237 LEMMIGNKHERIKLLESQLVEGEGK---PGE--VINPNFTIACSQGAVRIMRLQRAGGRV 291
+ R+KL L EG GK PGE + I + V++ R+Q G ++
Sbjct: 239 TLLDDA----RLKLGPVSLTEGIGKQLHPGEALISKDAVYIGTATQPVQLDRIQPPGKKM 294
Query: 292 LDIGDFLLG 300
++ D+ G
Sbjct: 295 MNAADWARG 303
>gi|154508790|ref|ZP_02044432.1| hypothetical protein ACTODO_01299 [Actinomyces odontolyticus ATCC
17982]
gi|153798424|gb|EDN80844.1| hypothetical protein ACTODO_01299 [Actinomyces odontolyticus ATCC
17982]
Length = 314
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 101/312 (32%), Positives = 156/312 (50%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E AV TL+AL+SSSH + V T+PP G RG S V + A EF +
Sbjct: 1 MRIIFAGTPEAAVPTLRALLSSSHEVALVITRPPARRG-RGKTMYPSPVAEVATEFGVEL 59
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L T L + Q + D+ VVVAYG ++P +L G+ N H S LPRWRGAAP
Sbjct: 60 LETTTLKTPDIAQRIEDVQADLGVVVAYGGLVPPNVLAMPVHGWVNLHFSDLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q AI GD T + +++ LDTG V +VPI L ++ A ++
Sbjct: 120 VQWAIREGDATTASCVFNLEEGLDTGSVYSRVEVPIGHESAGELLS-SMAKAGADQVLGV 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D L + +PQ G+T+A ++ + V+F A IR+++P PGA+ +
Sbjct: 179 VDALAAGSATATPQPSEGVTHARRLEHVDGYVSFTHDAGYEDRVIRSVTPNPGAYTVLPG 238
Query: 242 GNKHERIKLLESQLVE-GEGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
R+KL ++ V+ + PG+ V T+ C+ GA+ + ++ AG +D +
Sbjct: 239 ---GARMKLDKATPVDRDDLAPGQLDVTKKQVTVGCTSGALVLGKVAPAGKSWMDAAAWA 295
Query: 299 LGCPVIIGCIVG 310
G +G
Sbjct: 296 RGARPSEDLRLG 307
>gi|312793227|ref|YP_004026150.1| methionyl-tRNA formyltransferase [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312876961|ref|ZP_07736936.1| methionyl-tRNA formyltransferase [Caldicellulosiruptor
lactoaceticus 6A]
gi|311796276|gb|EFR12630.1| methionyl-tRNA formyltransferase [Caldicellulosiruptor
lactoaceticus 6A]
gi|312180367|gb|ADQ40537.1| methionyl-tRNA formyltransferase [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 316
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 103/322 (31%), Positives = 161/322 (50%), Gaps = 20/322 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L +VFMGT EFAV L+ L ++ V TQP +P G R AV + AQ+
Sbjct: 1 MNLDIVFMGTPEFAVDVLRKLTQEPFVNLKLVVTQPDKPVG-RKQILTAPAVKEFAQKVG 59
Query: 60 LPALVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+ + P KL E N D VVVAYG ++P+ +L K G N HASLLP +R
Sbjct: 60 IEVVQPEKLKNNEEFYELLKEINPDTIVVVAYGKILPKEVLEIPKYGCINVHASLLPEYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPIQR +M G TG+ IMKMD+ LDTG + ++V I +N + L ++L+ + +
Sbjct: 120 GAAPIQRVLMDGKEYTGVTIMKMDEGLDTGDILLQKEVKIENNDDILTLSKKLAEVGSQL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
++E + +E Q + TYA I K E ++++ A+ ++N RAL +PG +
Sbjct: 180 LIETLRNIESI--TPVKQDHSRATYAPPIKKEEGKIDWDMCAKEIYNKFRALKIWPGIFT 237
Query: 238 EMMIGNKHERIKLLESQLVEGE----------GKPGEVINPNFTIACSQGAVRIMRLQRA 287
+ +K+ + + + G E+ + + I G +R+ LQ
Sbjct: 238 TFKE----KLLKIHDMGIAQDNKDNINSNVPNGTVVEIDDSSIIIKVRDGLIRLKLLQLE 293
Query: 288 GGRVLDIGDFLLGCPVIIGCIV 309
GG+ + DF+ G + G ++
Sbjct: 294 GGKKIGARDFVNGYKIKRGDVL 315
>gi|227504403|ref|ZP_03934452.1| methionyl-tRNA formyltransferase [Corynebacterium striatum ATCC
6940]
gi|227199051|gb|EEI79099.1| methionyl-tRNA formyltransferase [Corynebacterium striatum ATCC
6940]
Length = 317
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 102/309 (33%), Positives = 150/309 (48%), Gaps = 13/309 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT E AV L+ L++S H +V+V T+P G RG S V + AQ+ +
Sbjct: 1 MRIVFAGTPEPAVVALEKLIASKHEVVAVITRPDARRG-RGRTLHPSPVKELAQKHGIEV 59
Query: 63 LVPTKLGQEEYE------QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
L P+ L + + + + VVAYG +I +L+ + G+ N H SLLP W
Sbjct: 60 LTPSTLKPGTEDGEALRARLRDLSPEAIPVVAYGNLITPDLLDLPRHGWVNLHFSLLPAW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAP+Q AI AGD TG ++DK LDTG + + I + L L+
Sbjct: 120 RGAAPVQAAIAAGDEVTGATTFRIDKGLDTGVILGTLEEKIQATDTADDLLTRLAYAGGD 179
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+VE MD L + Q +YA KI+ + RVN+ SAE + HIRA +P PGAW
Sbjct: 180 LLVETMDGLAAGTITPHEQSGE-PSYAHKIAVEDARVNWQDSAEAIDRHIRAHTPAPGAW 238
Query: 237 LEMMIGNKHERIKLLESQLVEGEG---KPGE--VINPNFTIACSQGAVRIMRLQRAGGRV 291
+ L EG PGE + + + + AV++ RLQ G ++
Sbjct: 239 TMLGEERVKLGPVSLIGVDPALEGVALAPGEAHITKKSVYVGTADAAVKLERLQVPGKKM 298
Query: 292 LDIGDFLLG 300
++ D+ G
Sbjct: 299 MNAADWARG 307
>gi|254468862|ref|ZP_05082268.1| methionyl-tRNA formyltransferase [beta proteobacterium KB13]
gi|207087672|gb|EDZ64955.1| methionyl-tRNA formyltransferase [beta proteobacterium KB13]
Length = 311
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 99/312 (31%), Positives = 162/312 (51%), Gaps = 10/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L++V+ GT EFA+ L+ + S I++V TQP RPAG RG+K S + K A++ L
Sbjct: 2 LKIVYAGTPEFALPCLKKINDSDMEIIAVLTQPDRPAG-RGMKIKESPIKKYAKDNQLLY 60
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P K+ + + + DV +V AYG+++P ++ YN HAS+LP+WRGAAPI
Sbjct: 61 FQPEKIDEGFTKSIEELSPDVLIVAAYGIILPNYFIDIFPRKAYNIHASILPKWRGAAPI 120
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH-AMVEA 181
QRAIM GDN+ G+ IM++ + LD G + ++ N + + L+ A M
Sbjct: 121 QRAIMHGDNQIGVTIMEVVEKLDAGNIFLIKSFDRDPNKTSGNYFEILANDGADLMMQHL 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L + Q+E +TYA+KISK E +N AEN+ N + AL+PFP + +
Sbjct: 181 NNIQLGLPLESTIQVEEEVTYAKKISKSEAYLNLENKAENIVNKVMALNPFPVSRISFRQ 240
Query: 242 GNKHERIKLLESQLVEGEG---KPGEV-INPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+K+ ++L +PG + + + +A ++I +Q +GG++L DF
Sbjct: 241 RE----VKIFHAELTNISSIENQPGSINLLEDLLVATGDFYIKINSIQISGGQILTGKDF 296
Query: 298 LLGCPVIIGCIV 309
+ +
Sbjct: 297 IKNYQLKPAENF 308
>gi|222474950|ref|YP_002563365.1| methionyl-tRNA formyltransferase (fmt) [Anaplasma marginale str.
Florida]
gi|222419086|gb|ACM49109.1| methionyl-tRNA formyltransferase (fmt) [Anaplasma marginale str.
Florida]
Length = 324
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 103/302 (34%), Positives = 158/302 (52%), Gaps = 14/302 (4%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+V+FMG+SEF+V TL+ L+ S H +++VYT+ P+PAG RG + VH A ++P
Sbjct: 25 KVIFMGSSEFSVPTLEFLIGSQHEVLAVYTKAPKPAG-RGHLLTKTPVHAYADAHNVPVR 83
Query: 64 VPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P E + + D +V +YG+++P+ +L + G N H SLLPRWRGAAP+
Sbjct: 84 SPASLSSDSERDIIEKYMPDAIIVASYGMILPRWMLEVPRFGCINVHPSLLPRWRGAAPM 143
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI++GD TG+ IM++++ LD G + PI S N L + LS + +++ +
Sbjct: 144 QHAILSGDAVTGVTIMQLNERLDAGDIFLQESTPIGSRENIVALSERLSSMGGRMLLKVL 203
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D L+ Q + G TYA K E VNF +A+ + +RA P +L
Sbjct: 204 DNLDTMRSVS--QDDAGATYAAK--PSEFCVNFNDAADYICRQVRAFYPRMFFFL----- 254
Query: 243 NKHERIKLLESQLVEGEG-KPGEVINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLLG 300
+R+KLLE+ E G + G+V+N I C G + +Q + DI FL G
Sbjct: 255 -DGKRVKLLEADNYELAGAQIGDVVNDELHIQCGNGTVLAPKIVQPESKKPCDIRSFLRG 313
Query: 301 CP 302
Sbjct: 314 FR 315
>gi|154249589|ref|YP_001410414.1| methionyl-tRNA formyltransferase [Fervidobacterium nodosum Rt17-B1]
gi|171769350|sp|A7HLH4|FMT_FERNB RecName: Full=Methionyl-tRNA formyltransferase
gi|154153525|gb|ABS60757.1| methionyl-tRNA formyltransferase [Fervidobacterium nodosum Rt17-B1]
Length = 310
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 89/312 (28%), Positives = 147/312 (47%), Gaps = 11/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT EFA + L L+ ++V+V +Q +P G RG K + + V + AQ++ +P
Sbjct: 1 MRILFMGTPEFAASYLDFLIQKKFNVVAVISQKDKPRG-RGQKLLPTPVKEVAQKYGIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P+KL +E E ++ D+ +VVAYG ++ + L + YN H SLLP++RG AP+
Sbjct: 60 FQPSKLNEEGLEIIENYRPDIGIVVAYGRLLRKPFL--DAIPLYNVHTSLLPKYRGPAPM 117
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI G+ TG+ I K+ + +D G +A R + + ++ +
Sbjct: 118 QRAIENGERVTGVTIFKISEGMDEGDIALQRAFELEECEPFGSVYEK---FIKYGTELLQ 174
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ L + L+PQ + TYA KI K + V+F + A V N IRA P PG +
Sbjct: 175 EFLRNYPVTLTPQDHSKATYAPKIEKKDLYVDFSKPAVEVRNKIRAYDPTPGVRTFLNDI 234
Query: 243 NKHERIKLLESQLVEGEGKPGEVI-----NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +PG V+ + + I G + I +Q G +
Sbjct: 235 EVKLYGACEIESNSQENIEPGTVVRIEKQSGDGVIKTIDGLLHIKYIQFPGKNKITFLSA 294
Query: 298 LLGCPVIIGCIV 309
G + G +
Sbjct: 295 KNGGLIKEGMVF 306
>gi|152979922|ref|YP_001351834.1| methionyl-tRNA formyltransferase [Janthinobacterium sp. Marseille]
gi|166214902|sp|A6SU87|FMT_JANMA RecName: Full=Methionyl-tRNA formyltransferase
gi|151279999|gb|ABR88409.1| methionyl-tRNA formyltransferase [Janthinobacterium sp. Marseille]
Length = 316
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 121/315 (38%), Positives = 174/315 (55%), Gaps = 17/315 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL ++ I V TQP RPAG RG++ SAV + A +P
Sbjct: 1 MKIIFAGTPEFAAVALAALHAAGFEIPLVLTQPDRPAG-RGMQLHASAVKQFALAHDIPV 59
Query: 63 LVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P L + + DV VV AYGL++PQ IL+ G N HASLL
Sbjct: 60 AQPVSLRLDGKYPEVAAEAHALLKATPHDVMVVAAYGLILPQSILDIPPRGCINIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RAI +GD ETG+ IM+M+ LDTGP+ M+++PI+++ TA L +L+ L
Sbjct: 120 PRWRGAAPIHRAIESGDAETGVTIMQMELGLDTGPMLAMQRLPITADDTTASLHDKLATL 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+V+ + ++EQ +LP PQ +G YA KI K E ++F + AE + IRA +PFP
Sbjct: 180 GGEMIVQTLRRMEQGDLPAEPQP-DGANYAAKILKEEATLDFTQPAEQLARKIRAFNPFP 238
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGG 289
GA + ++ + PG+VI + +AC GA+R+ LQ+ GG
Sbjct: 239 GAAAT--CDGTLIKFWHAQAVPASNQLPPGQVIAANPHDGVLVACGDGALRVTELQKPGG 296
Query: 290 RVLDIGDFLLGCPVI 304
+ L +FL G +
Sbjct: 297 KRLSAVEFLKGFTLE 311
>gi|89256594|ref|YP_513956.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica LVS]
gi|115315023|ref|YP_763746.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica OSU18]
gi|156502724|ref|YP_001428789.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167010621|ref|ZP_02275552.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica FSC200]
gi|254367912|ref|ZP_04983932.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica 257]
gi|290953843|ref|ZP_06558464.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica URFT1]
gi|295312780|ref|ZP_06803516.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica URFT1]
gi|122324966|sp|Q0BLC5|FMT_FRATO RecName: Full=Methionyl-tRNA formyltransferase
gi|123094504|sp|Q2A2U6|FMT_FRATH RecName: Full=Methionyl-tRNA formyltransferase
gi|166214895|sp|A7NCY0|FMT_FRATF RecName: Full=Methionyl-tRNA formyltransferase
gi|89144425|emb|CAJ79724.1| Methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica LVS]
gi|115129922|gb|ABI83109.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica OSU18]
gi|134253722|gb|EBA52816.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica 257]
gi|156253327|gb|ABU61833.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica FTNF002-00]
Length = 313
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 116/319 (36%), Positives = 168/319 (52%), Gaps = 18/319 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT + + L+ L S H+I +V TQP R G RG K S V + A P
Sbjct: 3 KLNIIFAGTPDISAQVLKDLYKSQHNIQAVLTQPDRAKG-RGKKVQFSPVKEVALANHTP 61
Query: 62 ALVP--TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K E EQ DV VV+AYG+++PQ L+ + G N H SLLP+WRGA
Sbjct: 62 VFQPLSFKKNPEVLEQIKQLKPDVIVVIAYGIIVPQEFLDIPRYGCLNIHVSLLPKWRGA 121
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD +TG+ IM+MD LDTG + ++ I + L + + L ++
Sbjct: 122 APIQRAIQAGDTKTGVCIMQMDAGLDTGDILNTLEIEIQETDTSQTLHDKFAKLSIKPLL 181
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E ++K+E + PQ TYA KI+K E ++F +SA + HIRA +P+PGA+ +
Sbjct: 182 ETLEKIE--IIKPEPQQGE-PTYAHKITKQEGLIDFTKSAWRISCHIRAFTPWPGAYFIL 238
Query: 240 MIGNKHERIKLLESQLV---EGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLD 293
E IK+ E +++ K G +I+ F IA S +R +LQ ++L+
Sbjct: 239 DD----EAIKVGEFEILYQNTDNRKAGTIIDIYRSGFDIATSDKIIRFRQLQFPNKKMLN 294
Query: 294 IGDFLLGCPVI--IGCIVG 310
I D L G + IG +G
Sbjct: 295 IVDILNGKDLDKYIGYKLG 313
>gi|91790467|ref|YP_551419.1| methionyl-tRNA formyltransferase [Polaromonas sp. JS666]
gi|91699692|gb|ABE46521.1| methionyl-tRNA formyltransferase [Polaromonas sp. JS666]
Length = 357
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 127/324 (39%), Positives = 169/324 (52%), Gaps = 22/324 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT EFA L +L ++ I V TQP RPAG RG+K SAV + AQ +P
Sbjct: 33 MRVIFAGTPEFARVALASLQAAGFDIPLVLTQPDRPAG-RGMKLQASAVKQWAQSHQVPV 91
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ ADV VV AYGL++PQ +L+A +LG N HASLL
Sbjct: 92 AQPRSLRLDGKYPDDAAAARTAIEAARADVMVVAAYGLILPQWVLDAPRLGCLNIHASLL 151
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RAI AGD +TG+ IM+MD LDTG + + K+ I TA L L+ L
Sbjct: 152 PRWRGAAPIHRAIEAGDAQTGVTIMQMDAGLDTGDMLLLEKLTIGPEDTTASLHDRLAGL 211
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+V A++ L Q GITYA KI K E +++ RSA + IRA +PFP
Sbjct: 212 GGRLIVNALELAAGGALRPLVQPSEGITYAHKIEKNEALLDWTRSAAALERRIRAFNPFP 271
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGK-----PGEVIN---PNFTIACSQGAVRIMRLQ 285
GA + E IK + + G + PG+V+ I + VR+ RLQ
Sbjct: 272 GAAGVL----DGETIKFWRAAVPAGALRPVGVLPGQVVAAGPEGIDICAADALVRVTRLQ 327
Query: 286 RAGGRVLDIGDFLLGCPVIIGCIV 309
+AGG+ L+ DFL G + G +
Sbjct: 328 KAGGKALEAADFLRGFEIRPGMVF 351
>gi|194336842|ref|YP_002018636.1| methionyl-tRNA formyltransferase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309319|gb|ACF44019.1| methionyl-tRNA formyltransferase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 319
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 89/321 (27%), Positives = 154/321 (47%), Gaps = 16/321 (4%)
Query: 1 MTL--RVVFMGTSEFAVATLQALVSSS--HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ 56
M++ R++FMGT EFAV +LQAL + IV V T +P + + S V A+
Sbjct: 1 MSIMTRIIFMGTPEFAVPSLQALAAEKDTFEIVLVVTGSDKPRRSKHADAEPSPVKVAAR 60
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+LP + ++ ++ +VVA ++P I LG +N HASLLP +
Sbjct: 61 ALALPVYEVDDVTHPDFADTVASCKADVIVVAAFRILPPAIYEQAALGAFNLHASLLPAY 120
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPI +I+ G+ ETG+ + + +DTG + + PI+ N N L L+++ A
Sbjct: 121 RGAAPINWSIIRGERETGVTTFFLQQRVDTGNIILQERTPIAPNENATDLASRLALIGAQ 180
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+V+ + + ++ +S Q E + A K+++ TR+ + + ++HN IR L+ P AW
Sbjct: 181 VVVDTVHLIASRSVVVSGQDEALASRAPKLTRDNTRICWSQPVADMHNFIRGLALKPAAW 240
Query: 237 LEMMIGNKHERIKLLESQLVEGEGK------PGE--VINPNFTIACSQGAVRIMRLQRAG 288
+ +K+ + E + PG V S G + ++ LQ G
Sbjct: 241 TTFKG----KTMKIFRAVPAELSLETLCTASPGTLYVDQGRLCAKGSDGWIELLSLQLEG 296
Query: 289 GRVLDIGDFLLGCPVIIGCIV 309
+ ++ +FL G G ++
Sbjct: 297 RKPMEAAEFLRGFRPDAGPLL 317
>gi|332300601|ref|YP_004442522.1| Methionyl-tRNA formyltransferase [Porphyromonas asaccharolytica DSM
20707]
gi|332177664|gb|AEE13354.1| Methionyl-tRNA formyltransferase [Porphyromonas asaccharolytica DSM
20707]
Length = 335
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 101/322 (31%), Positives = 161/322 (50%), Gaps = 15/322 (4%)
Query: 1 MTL---RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M R++F GT+ FA A L+ LV + IV+V T P +PAG RG + SAV A +
Sbjct: 12 MKKDQVRIIFYGTAPFATACLERLVDEGYPIVAVVTAPDKPAG-RGHRLQPSAVKLCATK 70
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L PT L E + Q L+ VV ++P+ + + G N H SLLP++R
Sbjct: 71 LGLPILQPTNLRDEAFVQQLTELKPTLGVVVAFRMLPREVWSLPPWGTVNIHGSLLPQYR 130
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ G++ETG+ + ++ +DTG + PI S N L +L L A
Sbjct: 131 GAAPINWALINGESETGVTLFQLRHEIDTGDIIAASACPIESEDNFGTLYDKLMALGAEL 190
Query: 178 MVEAMD---KLEQNNLPLSPQ-IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ + + E PQ + + A K++K TR+++ +SA +HN +R L+P P
Sbjct: 191 LAHGLSLLTQHEGRYPQALPQEERSDLHPAPKLTKENTRIDWHQSAHEIHNLVRGLAPQP 250
Query: 234 GAWLEMMIGN-KHERIKLLESQLVEGEG---KPGEVI---NPNFTIACSQGAVRIMRLQR 286
GAW + + N + +K+ + L + E G+ + + C G + I +L+
Sbjct: 251 GAWTMLELPNEEPLLVKIYATTLSQQEAVERPVGQCVSPRKGQLAVQCGDGLLLIEQLKP 310
Query: 287 AGGRVLDIGDFLLGCPVIIGCI 308
G ++L D+L G V I +
Sbjct: 311 QGKKLLSARDWLNGLKVSIEDV 332
>gi|226953280|ref|ZP_03823744.1| methionyl-tRNA formyltransferase [Acinetobacter sp. ATCC 27244]
gi|226835968|gb|EEH68351.1| methionyl-tRNA formyltransferase [Acinetobacter sp. ATCC 27244]
Length = 320
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 113/320 (35%), Positives = 168/320 (52%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL+ +SH I++VYTQP R +G RG K S V + A E LP
Sbjct: 1 MKIIFAGTPEFAATALAALLKTSHQIIAVYTQPDRKSG-RGQKLTPSPVKQLALEHGLPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + DV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 FQPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQTVLDTPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD+ETGI IM+M LDTG + + PI++ +A L +L+ A
Sbjct: 120 RGAAPIQRAIATGDDETGITIMQMAAGLDTGDMMYKTYCPITAADTSATLHDKLATQGAE 179
Query: 177 AMVE---AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ + L+ Q E YA K+ K E R+++ ++A + +IRA +P+P
Sbjct: 180 AICTVLESEQSLQDFIAKREVQDETLTVYAHKLVKTEARIDWTQTAIQIDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGG 289
A++++ N + SQ + + + GE++ +AC + V + LQ +GG
Sbjct: 240 VAFIQLDENNALRVWGSMLSQHSKADAQIGEILAINKQGVHVACGDNSTVCLTSLQWSGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ L+ + IG I+
Sbjct: 300 KALNPVQIAQTQKLNIGQIL 319
>gi|254372757|ref|ZP_04988246.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570484|gb|EDN36138.1| methionyl-tRNA formyltransferase [Francisella novicida GA99-3549]
Length = 313
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 116/319 (36%), Positives = 168/319 (52%), Gaps = 18/319 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT + + L+ L S H+I +V TQP R G RG K S V + A P
Sbjct: 3 KLNIIFAGTPDISAQVLKDLYKSQHNIQAVLTQPDRAKG-RGKKVQFSPVKEVALANHTP 61
Query: 62 ALVP--TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K E EQ DV VV+AYG+++PQ L+ + G N H SLLP+WRGA
Sbjct: 62 VFQPLSFKKNPEVLEQIKQLKPDVIVVIAYGIIVPQEFLDIPRYGCLNIHVSLLPKWRGA 121
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD +TGI IM+MD LDTG + ++ I + L + + L ++
Sbjct: 122 APIQRAIQAGDTKTGICIMQMDAGLDTGDILNTLEIEIQETDTSQTLHDKFAKLSIKPLL 181
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E ++K+E + PQ +YA KI+K E ++F +SA + HIRA +P+PGA+ +
Sbjct: 182 ETLEKIE--IIKPEPQQGE-PSYAHKITKQEGLIDFTKSAWQISCHIRAFTPWPGAYFIL 238
Query: 240 MIGNKHERIKLLESQLV---EGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLD 293
E IK+ E +++ K G +I+ F IA S +R +LQ ++L+
Sbjct: 239 DD----EAIKVGEFEILYQNTDNRKAGTIIDIDRSGFDIATSDKIIRFRQLQFPNKKMLN 294
Query: 294 IGDFLLGCPVI--IGCIVG 310
I D L G + IG +G
Sbjct: 295 IVDILNGKDLDKYIGYKLG 313
>gi|315185955|gb|EFU19719.1| methionyl-tRNA formyltransferase [Spirochaeta thermophila DSM 6578]
Length = 325
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 94/313 (30%), Positives = 149/313 (47%), Gaps = 7/313 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRV+F GT FAV +L+A V+S +V V T P P G RG + V ++A L
Sbjct: 8 SLRVLFAGTPAFAVPSLRA-VASRFPVVGVLTNPDAPRG-RGRRLQSPPVKEEALRLGLR 65
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P +L EQ D+ VVVAYG + + L G N H SLLP++RG AP
Sbjct: 66 VFQPERLDAAFREQVARLAPDILVVVAYGKIFGPKFLALFPKGGINLHPSLLPKYRGPAP 125
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ + ETGI + K+D +D G + ++ ++ + L S A +VEA
Sbjct: 126 IPAAILNLEPETGITVQKLDLRMDAGDIILQERISLTGRETSESLSLWASERGAELLVEA 185
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ PQ E TY + K + + + +A + +RA P+P A+ +
Sbjct: 186 LHLIEEGKATPVPQDETAATYCALLKKEDGLILWEETAVRIDAKVRAFYPWPRAYTSLNQ 245
Query: 242 GNKHERIKLLESQLVEGEGKPGEV--INP--NFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + + E + PG V ++ I +G + +++LQR G L +F
Sbjct: 246 HRLYLLETV-PLEDREADASPGTVAGVDKDYGILIQTGKGLLGVLKLQREGRNPLGWKEF 304
Query: 298 LLGCPVIIGCIVG 310
L G P ++G +G
Sbjct: 305 LNGMPDLVGLRLG 317
>gi|258654278|ref|YP_003203434.1| methionyl-tRNA formyltransferase [Nakamurella multipartita DSM
44233]
gi|258557503|gb|ACV80445.1| methionyl-tRNA formyltransferase [Nakamurella multipartita DSM
44233]
Length = 307
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 101/312 (32%), Positives = 154/312 (49%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT AV +L AL+ S H + +V T+PP P G RG S + A+ +P
Sbjct: 1 MRIVFAGTPAPAVPSLTALLDSRHEVAAVITRPPAPRG-RGRTLHPSPIGALAESAGVPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P E+ + + + A VVAYG ++P IL G+ N H SLLP WRGA+P
Sbjct: 60 LTPRSARDPEFAEQLAAIEPEAAAVVAYGNLLPPPILAIPAHGWVNLHFSLLPAWRGASP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ AI AGD+ TG + +++ +DTGPV + PI L L+ A +V
Sbjct: 120 VPAAIRAGDDITGASTFRLEAGMDTGPVYGLITEPIGDGDTAGDLLDRLATAGARLLVAT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D L + PQ +G++YA KI+ + R+++ A VH IR+L+P PGAW
Sbjct: 180 LDGLADGTVVALPQSADGVSYAGKITVADARLDWSMPATAVHRTIRSLTPDPGAWT---- 235
Query: 242 GNKHERIKLLE-SQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ R+ L + + PG + + + AVR+ RL G + +D D+
Sbjct: 236 DSPWGRLVLGPVAHTDRTDLPPGRLEAGKRDVLVGTGTTAVRLGRLTAPGRKPMDAADWA 295
Query: 299 LGCPVIIGCIVG 310
G G ++G
Sbjct: 296 RGARPEPGTLLG 307
>gi|56708025|ref|YP_169921.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670496|ref|YP_667053.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis FSC198]
gi|134301840|ref|YP_001121808.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|224457108|ref|ZP_03665581.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254369419|ref|ZP_04985431.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica FSC022]
gi|254370508|ref|ZP_04986513.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis FSC033]
gi|254874825|ref|ZP_05247535.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|73919393|sp|Q5NGC1|FMT_FRATT RecName: Full=Methionyl-tRNA formyltransferase
gi|123359491|sp|Q14HS3|FMT_FRAT1 RecName: Full=Methionyl-tRNA formyltransferase
gi|166214897|sp|A4IXN6|FMT_FRATW RecName: Full=Methionyl-tRNA formyltransferase
gi|54114089|gb|AAV29678.1| NT02FT0514 [synthetic construct]
gi|56604517|emb|CAG45558.1| Methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320829|emb|CAL08941.1| Methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis FSC198]
gi|134049617|gb|ABO46688.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis WY96-3418]
gi|151568751|gb|EDN34405.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis FSC033]
gi|157122369|gb|EDO66509.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
holarctica FSC022]
gi|254840824|gb|EET19260.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159215|gb|ADA78606.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
tularensis NE061598]
Length = 313
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 116/319 (36%), Positives = 168/319 (52%), Gaps = 18/319 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT + + L+ L S H+I +V TQP R G RG K S V + A P
Sbjct: 3 KLNIIFAGTPDISAQVLKDLYKSQHNIQAVLTQPDRAKG-RGKKVQFSPVKEVALANHTP 61
Query: 62 ALVP--TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K E EQ DV VV+AYG+++PQ L+ + G N H SLLP+WRGA
Sbjct: 62 VFQPLSFKKNPEVLEQIKQLKPDVIVVIAYGIIVPQEFLDIPRYGCLNIHVSLLPKWRGA 121
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD +TG+ IM+MD LDTG + ++ I + L + + L ++
Sbjct: 122 APIQRAIQAGDTKTGVCIMQMDAGLDTGDILNTLEIEIQETDTSQTLHDKFAKLSIKPLL 181
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E ++K+E + PQ TYA KI+K E ++F +SA + HIRA +P+PGA+ +
Sbjct: 182 ETLEKIE--IIKPEPQQGE-PTYAHKITKQEGLIDFTKSAWQISCHIRAFTPWPGAYFIL 238
Query: 240 MIGNKHERIKLLESQLV---EGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLD 293
E IK+ E +++ K G +I+ F IA S +R +LQ ++L+
Sbjct: 239 DD----EAIKVGEFEILYQNTDNRKAGTIIDIYRSGFDIATSDKIIRFRQLQFPNKKMLN 294
Query: 294 IGDFLLGCPVI--IGCIVG 310
I D L G + IG +G
Sbjct: 295 IVDILNGKDLDKYIGYKLG 313
>gi|184155727|ref|YP_001844067.1| methionyl-tRNA formyltransferase [Lactobacillus fermentum IFO 3956]
gi|227515681|ref|ZP_03945730.1| methionyl-tRNA formyltransferase [Lactobacillus fermentum ATCC
14931]
gi|260663556|ref|ZP_05864446.1| methionyl-tRNA formyltransferase [Lactobacillus fermentum 28-3-CHN]
gi|238692984|sp|B2GD55|FMT_LACF3 RecName: Full=Methionyl-tRNA formyltransferase
gi|183227071|dbj|BAG27587.1| methionyl-tRNA formyltransferase [Lactobacillus fermentum IFO 3956]
gi|227085929|gb|EEI21241.1| methionyl-tRNA formyltransferase [Lactobacillus fermentum ATCC
14931]
gi|260552097|gb|EEX25150.1| methionyl-tRNA formyltransferase [Lactobacillus fermentum 28-3-CHN]
gi|299783409|gb|ADJ41407.1| Methionyl-tRNA formyltransferase [Lactobacillus fermentum CECT
5716]
Length = 316
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 91/314 (28%), Positives = 162/314 (51%), Gaps = 15/314 (4%)
Query: 3 LR-VVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
++ +VFMGT +FAV L+AL+ S + +++V +QP R G R + + V + A E +
Sbjct: 1 MKSIVFMGTPQFAVPILKALIDSEDYQVLAVVSQPDRRVG-RKRELRATPVKELALENGI 59
Query: 61 PALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P E ++ + D+ + A+G +P ++L A K+ N H SLLP++RG
Sbjct: 60 EVLTPEKINHSPEMDRVIELAPDLIITAAFGQFLPDKLLAAAKVAAINVHGSLLPKYRGG 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ A+M GD ETG+ IM M K +D G + +PI+ +T + ++LS+L ++
Sbjct: 120 APIQYAVMNGDAETGVTIMYMVKKMDAGDIISQASLPITKQDDTGTMFEKLSLLGRDLLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + KL ++ Q E+ + ++ I++ + ++F A+ + + +R L P P + +
Sbjct: 180 DTLPKLLAGDITPVKQDESQVVFSPNITREQETIDFTLPADRIDDLVRGLRPAPVGNMVI 239
Query: 240 MIGNKHERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLD 293
R K+ + + + +PG+V+ IA G +I L+ AG +D
Sbjct: 240 ----DGLRTKVYDVTPLTETTDLQPGQVVRVEKHALIIAAGAGTTYQINSLKPAGKPKMD 295
Query: 294 IGDFLLGCP-VIIG 306
I D+L G + G
Sbjct: 296 ITDYLNGHQNLKPG 309
>gi|118497395|ref|YP_898445.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
novicida U112]
gi|195536087|ref|ZP_03079094.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
novicida FTE]
gi|166214896|sp|A0Q626|FMT_FRATN RecName: Full=Methionyl-tRNA formyltransferase
gi|118423301|gb|ABK89691.1| methionyl-tRNA formyltransferase [Francisella novicida U112]
gi|194372564|gb|EDX27275.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
novicida FTE]
Length = 313
Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 116/319 (36%), Positives = 168/319 (52%), Gaps = 18/319 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT + + L+ L S H+I +V TQP R G RG K S V + A P
Sbjct: 3 KLNIIFAGTPDISAQVLKDLYKSQHNIQAVLTQPDRAKG-RGKKVQFSPVKEVALANHTP 61
Query: 62 ALVP--TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K E EQ DV VV+AYG+++PQ L+ + G N H SLLP+WRGA
Sbjct: 62 VFQPLSFKKNPEVLEQIKQLKPDVIVVIAYGIIVPQEFLDIARYGCLNIHVSLLPKWRGA 121
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD +TGI IM+MD LDTG + ++ I + L + + L ++
Sbjct: 122 APIQRAIQAGDTKTGICIMQMDAGLDTGDILNTLEIEIQETDTSQTLHDKFAKLSIKPLL 181
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E ++K+E + PQ +YA KI+K E ++F +SA + HIRA +P+PGA+ +
Sbjct: 182 ETLEKIE--IIKPEPQQGE-PSYAHKITKQEGLIDFTKSAWQISCHIRAFTPWPGAYFIL 238
Query: 240 MIGNKHERIKLLESQLV---EGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLD 293
E IK+ E +++ K G +I+ F IA S +R +LQ ++L+
Sbjct: 239 DD----EAIKVGEFEILYQNTDNRKAGTIIDIDRSGFDIATSDKIIRFRQLQFPNKKMLN 294
Query: 294 IGDFLLGCPVI--IGCIVG 310
I D L G + IG +G
Sbjct: 295 IVDILNGKDLDKYIGYKLG 313
>gi|169634913|ref|YP_001708649.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii SDF]
gi|229487445|sp|B0VQ12|FMT_ACIBS RecName: Full=Methionyl-tRNA formyltransferase
gi|169153705|emb|CAP02903.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii]
Length = 320
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 113/320 (35%), Positives = 169/320 (52%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL+ +SH I++VYTQP R AG RG K S V + E+++P
Sbjct: 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAG-RGQKLTPSPVKQLVLEYNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + DV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 YQPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD+ETGI IM+M LDTG + + PI+S +A L +L+ A
Sbjct: 120 RGAAPIQRAIATGDDETGITIMQMAAGLDTGDMMYKTYCPITSEDTSATLHDKLAAQGAT 179
Query: 177 AMV---EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ E+ + L++ Q E+ YA K+ K E R+++ +A V +IRA +P+P
Sbjct: 180 AICAVLESEETLQKYLAEREVQDESLTVYAHKLVKSEARIDWSMNAVQVDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGG 289
A++++ N S + + K GE+I +AC + + + +Q GG
Sbjct: 240 VAFIQLDENNALRVWYSTISNQNKADAKAGEIIAIDKQGVHVACGENTFICLTSVQWPGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ L+ + +G I+
Sbjct: 300 KALNAQQIAQTQKLHVGQIL 319
>gi|116670232|ref|YP_831165.1| methionyl-tRNA formyltransferase [Arthrobacter sp. FB24]
gi|166214871|sp|A0JVJ5|FMT_ARTS2 RecName: Full=Methionyl-tRNA formyltransferase
gi|116610341|gb|ABK03065.1| methionyl-tRNA formyltransferase [Arthrobacter sp. FB24]
Length = 306
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 87/309 (28%), Positives = 144/309 (46%), Gaps = 6/309 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT AV +L ALV + +V+V T+P P G R S V +A E +
Sbjct: 1 MRVLFAGTPAVAVPSLDALVQAGFDVVAVLTRPDAPVG-RKRVLTPSPVAARAAELGIEV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ K+ E + + D A +VAYG +IP+ L+ + G+ N H SLLP WRGAAP+
Sbjct: 60 IHAAKVDAEVTARIAAAAPDAAAIVAYGGLIPRAALDVPRHGWINLHFSLLPAWRGAAPV 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRA+MAGD+ TG +++ LDTGPV + + + L + LS A + + +
Sbjct: 120 QRAVMAGDDITGAVTFLLEEGLDTGPVFGTLTESVRPDDTSGELLERLSHSGAALLAQTL 179
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+E PQ + + R+++ A + R ++P PGAW +
Sbjct: 180 SAIEAGRAVAVPQSGDVSLAPKLGIDDG-RIDWHEPALAIGRRARGVTPEPGAWTTLDGQ 238
Query: 243 NKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
L + +PG+V+ + + V + R+Q +G +++ D+ G
Sbjct: 239 RVKLEPVALRTDA--PALQPGQVLLDGKSVLVGTGSHPVELTRIQPSGKKMMAAADWARG 296
Query: 301 CPVIIGCIV 309
+ G +
Sbjct: 297 QVALEGVVF 305
>gi|313885901|ref|ZP_07819641.1| methionyl-tRNA formyltransferase [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924656|gb|EFR35425.1| methionyl-tRNA formyltransferase [Porphyromonas asaccharolytica
PR426713P-I]
Length = 324
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 101/322 (31%), Positives = 160/322 (49%), Gaps = 15/322 (4%)
Query: 1 MTL---RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M R++F GT+ FA A L+ LV + IV+V T P +PAG RG + SAV A +
Sbjct: 1 MKKDQVRIIFYGTAPFATACLERLVDEGYPIVAVVTAPDKPAG-RGHRLQPSAVKLCATK 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L PT L E + Q L+ VV ++P + + G N H SLLP++R
Sbjct: 60 LGLPILQPTNLRDEAFVQQLTELKPTLGVVVAFRMLPHEVWSLPPWGTVNIHGSLLPQYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPI A++ G++ETG+ + ++ +DTG + PI S N L +L L A
Sbjct: 120 GAAPINWALINGESETGVTLFQLRHEIDTGDIIAASACPIESEDNFGTLYDKLMSLGAEL 179
Query: 178 MVEAMD---KLEQNNLPLSPQ-IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ + + E PQ + + A K++K TR+++ +SA +HN +R L+P P
Sbjct: 180 LAHGLSLLTQHEGRYPQALPQEERSDLHPAPKLTKENTRIDWHQSALEIHNLVRGLAPQP 239
Query: 234 GAWLEMMIGN-KHERIKLLESQLVEGEG---KPGEVI---NPNFTIACSQGAVRIMRLQR 286
GAW + + N + +K+ + L + E G+ + + C G + I +L+
Sbjct: 240 GAWTMLELPNEEPLLVKIYATTLSQQEAVERPVGQCVSPRKGQLAVQCGDGLLLIEQLKP 299
Query: 287 AGGRVLDIGDFLLGCPVIIGCI 308
G ++L D+L G V I +
Sbjct: 300 QGKKLLSARDWLNGLKVSIEDV 321
>gi|283778511|ref|YP_003369266.1| methionyl-tRNA formyltransferase [Pirellula staleyi DSM 6068]
gi|283436964|gb|ADB15406.1| methionyl-tRNA formyltransferase [Pirellula staleyi DSM 6068]
Length = 327
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 100/321 (31%), Positives = 166/321 (51%), Gaps = 15/321 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQP-PRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+V MGT FAV T +AL+ S H +V++ T+P P P GR K L+ + A +
Sbjct: 1 MRLVMMGTGPFAVPTFEALLESGHEVVALVTRPTPTPKGR--EKQSLNPMRDVAVARQIA 58
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E S AD+ +V YG ++ L A +LG N H SLLP++RG+A
Sbjct: 59 VHAPESINTPESVALLTSLAADLLIVCDYGQILKPAALAAARLGGINLHGSLLPKYRGSA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ +I+AGD TG++++ M LD GP+ +R+ PI L+ LS + A++E
Sbjct: 119 PVHWSILAGDATTGVSVIHMTPRLDGGPILAVRETPIGPEETMPELELRLSTMGVAAVLE 178
Query: 181 AMDKLEQNNLPLS---PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
A+D LEQ + PQ +T A + ++G+ +++ RSA + +RA P+PG++
Sbjct: 179 AIDLLEQWDGTSPIGTPQDATLVTKAPRFARGDGELDYRRSAVLLARQVRAFKPWPGSYT 238
Query: 238 EMMIGNKHERIKLLE---SQLVE--GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGG 289
+ + +++ ++ E PG V++ T+ + G + + LQ AG
Sbjct: 239 HWLREGQQPLRLIIDRATAEPAETASAAPPGTVVDVAHGKLTVMTADGLLVVTSLQPAGK 298
Query: 290 RVLDIGDFLLGCPVIIGCIVG 310
RVL +FL G + +G +G
Sbjct: 299 RVLSAAEFLNGYGLKVGAQLG 319
>gi|229496209|ref|ZP_04389929.1| methionyl-tRNA formyltransferase [Porphyromonas endodontalis ATCC
35406]
gi|229316787|gb|EEN82700.1| methionyl-tRNA formyltransferase [Porphyromonas endodontalis ATCC
35406]
Length = 335
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 104/319 (32%), Positives = 153/319 (47%), Gaps = 13/319 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F+GT+ FA L L+ S +S+V V T P RPAG RG K S V +A LP
Sbjct: 17 IRILFLGTAPFAARHLTFLIESGYSVVGVVTTPDRPAG-RGHKLQPSPVKVEALRLGLPI 75
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P +L E + + VV ++P+ + LG N HASLLPRWRGAAPI
Sbjct: 76 WQPERLRDESFLAEMRALRPTLGVVIAFRMLPEELWAMPDLGTVNIHASLLPRWRGAAPI 135
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A+MAGD ETG+++ ++ K LD G + R +PI N L L+ + E +
Sbjct: 136 NHALMAGDKETGVSLFRLTKGLDEGHILGQRALPIDENTLFGDLYDTLAEEGILLLGEFL 195
Query: 183 D-KLEQNNLPLSPQIENG-ITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
E Q ++ YA K++K TR+++ RSA +HN +R LSP P AW ++
Sbjct: 196 QACREDKIPEGVAQPKDTEEPYAHKLTKENTRIDWSRSAREIHNFVRGLSPLPTAWTTLV 255
Query: 241 IGNKHE-------RIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGR 290
E +++ + + PG V+ + +A G + I LQ +
Sbjct: 256 CPGAGEPLTYKLFVTRVVSEEPLPVGTTPGSVLPSPRRSLHVATGGGILAIEELQAPAKK 315
Query: 291 VLDIGDFLLGCPVIIGCIV 309
L I DFL G + G
Sbjct: 316 RLPIADFLNGVQLGEGAFF 334
>gi|330719304|ref|ZP_08313904.1| methionyl-tRNA formyltransferase [Leuconostoc fallax KCTC 3537]
Length = 321
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 104/309 (33%), Positives = 165/309 (53%), Gaps = 14/309 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT VVFMGT +FAV L+AL+ S + + +V TQP RP G R + V S V A
Sbjct: 1 MTYSVVFMGTPQFAVPILEALIQSADYQVKAVVTQPDRPQG-RKHQLVASPVKVAALAHD 59
Query: 60 LPALVPTKL-GQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P K+ E + ++ D + A+G +P +L A K+ N HASLLP++RG
Sbjct: 60 VPILQPDKMLHSPEMAEIIALQPDFIITAAFGQFLPTALLAAAKIAAVNTHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP+ AIM GD ETG++IM M K +D G V KVPI S+ N + ++LS +
Sbjct: 120 GAPVHYAIMNGDEETGVSIMYMVKKMDAGDVIDQVKVPILSSDNVGTMFEKLSFAGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNF-CRSAENVHNHIRALSPFPGAWL 237
++ + K+ + PQ E ++++ I+ + +NF +A+ + H+R L P A+
Sbjct: 180 MDTLPKIITGQIHPKPQNEALVSFSPNITHEQQALNFEKETAQALDWHVRGLYPTHPAYT 239
Query: 238 EMMIGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQG-AVRIMRLQRAGGRV 291
+ +R+KL++ ++ PG+V+ F++A + G ++I LQ AG
Sbjct: 240 VV----DKKRMKLIDVTPLDITTTLLPGQVVIKNKKQFSVAAANGTVLQINALQPAGKPK 295
Query: 292 LDIGDFLLG 300
+ I D+L G
Sbjct: 296 MLIQDYLNG 304
>gi|15807422|ref|NP_296155.1| methionyl-tRNA formyltransferase [Deinococcus radiodurans R1]
gi|21542065|sp|Q9RRQ3|FMT_DEIRA RecName: Full=Methionyl-tRNA formyltransferase
gi|6460250|gb|AAF11976.1|AE002073_6 methionyl-tRNA formyltransferase [Deinococcus radiodurans R1]
Length = 318
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 105/311 (33%), Positives = 150/311 (48%), Gaps = 13/311 (4%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+V F + FA+ L+AL + +V V QP +P G RGLK V +A E LP
Sbjct: 8 KVAFFASPAFALPVLEAL-RAEFEVVLVVAQPDKPVG-RGLKLTPPPVAARAAELGLPLA 65
Query: 64 VPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL Q ADVAV AYG ++P +L + GF N H SLLPR+RGAAP
Sbjct: 66 QPHKLRGNADFAAQLRDSGADVAVTCAYGKILPAGVLEIPRFGFLNTHTSLLPRYRGAAP 125
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ TG IM+ D+ +DTGPV ++PI + L LS A +V A
Sbjct: 126 IQWALIRGETVTGTTIMQTDEGMDTGPVLLQEELPIRPEWTSVELSAALSEQAAALIVRA 185
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE PQ E T+A + K + V + A+ V + R ++ +P
Sbjct: 186 LRTLETL--TPQPQDEAQATHAPLLVKEDGFVRWADPAQAVLDRFRGVAAWPQTTAFFGG 243
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R+KL L +G+G+PG+V+ T+AC +GAV I +Q + +
Sbjct: 244 ----KRLKLAGLTLGQGKGQPGKVLQVGAGGLTVACGEGAVCIATVQPEAKKAQPAQVWA 299
Query: 299 LGCPVIIGCIV 309
G V G
Sbjct: 300 QGQNVEQGARF 310
>gi|254374217|ref|ZP_04989699.1| methionyl-tRNA formyltransferase [Francisella novicida GA99-3548]
gi|151571937|gb|EDN37591.1| methionyl-tRNA formyltransferase [Francisella novicida GA99-3548]
gi|328676890|gb|AEB27760.1| Methionyl-tRNA formyltransferase [Francisella cf. novicida Fx1]
Length = 313
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 116/319 (36%), Positives = 168/319 (52%), Gaps = 18/319 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT + + L+ L S H+I +V TQP R G RG K S V + A P
Sbjct: 3 KLNIIFAGTPDISAQVLKDLYKSQHNIQAVLTQPDRAKG-RGKKVQFSPVKEVALANHTP 61
Query: 62 ALVP--TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K E EQ DV VV+AYG+++PQ L+ + G N H SLLP+WRGA
Sbjct: 62 VFQPLSFKKNPEVLEQIKQLKPDVIVVIAYGIIVPQEFLDIPRYGCLNIHVSLLPKWRGA 121
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD +TGI IM+MD LDTG + ++ I + L + + L ++
Sbjct: 122 APIQRAIQAGDTKTGICIMQMDAGLDTGDILNTLEIEIQETDTSQTLHDKFAKLSIKPLL 181
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E ++K+E + PQ +YA KI+K E ++F +SA + HIRA +P+PGA+ +
Sbjct: 182 ETLEKIE--IIKPEPQQGE-PSYAHKITKQEGLIDFTKSAWQISCHIRAFTPWPGAYFIL 238
Query: 240 MIGNKHERIKLLESQLV---EGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLD 293
E IK+ E +++ K G +I+ F IA S +R +LQ ++L+
Sbjct: 239 DD----EAIKVGEFEILYQNTDNRKVGTIIDIDRSGFDIATSDKIIRFRQLQFPNKKMLN 294
Query: 294 IGDFLLGCPVI--IGCIVG 310
I D L G + IG +G
Sbjct: 295 IVDILNGKDLDKYIGYKLG 313
>gi|256832545|ref|YP_003161272.1| methionyl-tRNA formyltransferase [Jonesia denitrificans DSM 20603]
gi|256686076|gb|ACV08969.1| methionyl-tRNA formyltransferase [Jonesia denitrificans DSM 20603]
Length = 311
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 101/306 (33%), Positives = 149/306 (48%), Gaps = 5/306 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVF GT + AV +L+ALV S H +V V T+ G RG + SAV +AQE L
Sbjct: 1 MRVVFAGTPDVAVPSLEALVDSPHDVVGVITRADARVG-RGRRVAPSAVRARAQELGLDV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L QE + DV VVAYG ++P +L+ K G+ N H SLLP WRGAAP+
Sbjct: 60 LTVPPSAQEFVPWLRERDVDVVAVVAYGHLLPASVLSVPKFGWVNLHFSLLPAWRGAAPV 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRA+MAGD TG + +++ +DTGPV + I + L + L+V A +V +
Sbjct: 120 QRAVMAGDAVTGASTFLIEEGMDTGPVFGVMTEAIRPTDTSGVLLERLAVAGAPLLVSTL 179
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM--M 240
D +E + Q G++YA K++ + RV++ R A V IR +P PGAW
Sbjct: 180 DAIESGDAQPVAQDVEGVSYAPKLNAEDVRVDWTRPAHLVDRIIRGGTPDPGAWTLWGSE 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+++ + PG+ V + VR+ + G R + D+
Sbjct: 240 GVRVGVGPVVVDGGPGDVGLAPGQLHVTKRAVWVGTGSDPVRLGEVTVPGKRAMPASDWA 299
Query: 299 LGCPVI 304
G +
Sbjct: 300 RGARLT 305
>gi|145224312|ref|YP_001134990.1| methionyl-tRNA formyltransferase [Mycobacterium gilvum PYR-GCK]
gi|189044572|sp|A4TC02|FMT_MYCGI RecName: Full=Methionyl-tRNA formyltransferase
gi|145216798|gb|ABP46202.1| methionyl-tRNA formyltransferase [Mycobacterium gilvum PYR-GCK]
Length = 310
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 97/307 (31%), Positives = 151/307 (49%), Gaps = 12/307 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+ +LQ L+ S H +++V T+P AGRRG S V + A +P
Sbjct: 1 MRLVFAGTPEPALPSLQRLIDSARHDVIAVLTRPDAAAGRRGR-PSPSPVAELAAAHGIP 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + EE+ L+ D VVAYG ++ + +L LG+ N H S+LP WRGAA
Sbjct: 60 VLKPPRPNSEEFVAELAALAPDCCAVVAYGALLREELLAVPALGWVNLHFSVLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A+ AGD TG +++ LD+GPV + I L L+ A +
Sbjct: 120 PVQAALAAGDEVTGATTFQIELSLDSGPVYGVVTETIRPTDTAGDLLGRLAESGAGLLEA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ G++ A K+S + R+ + A V IR+++P PGAW
Sbjct: 180 TMDGIEDGTLTAVPQPAEGVSIAPKVSVDDARIRWELPAHVVDRRIRSVTPNPGAWT--- 236
Query: 241 IGNKHERIKLLESQLVE---GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
RIK+ + + + +PGE+ + + + AV + +Q G + ++
Sbjct: 237 -MAGELRIKVGPVTVPDDGPKDLEPGEIRVGKKHVHVGTATDAVLLGTVQPPGKKSMNAA 295
Query: 296 DFLLGCP 302
D+ G
Sbjct: 296 DWARGAR 302
>gi|167628042|ref|YP_001678542.1| methionyl-tRNA formyltransferase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189044511|sp|B0U0T8|FMT_FRAP2 RecName: Full=Methionyl-tRNA formyltransferase
gi|167598043|gb|ABZ88041.1| methionyl-tRNA formyltransferase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 312
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 110/314 (35%), Positives = 163/314 (51%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L +VF GT + + L+ L S H+I +V TQP R G RG K S V + A +
Sbjct: 3 KLNIVFAGTPDISAQVLKDLYQSQHNIQAVLTQPDRAKG-RGKKIQFSPVKEVAIANNTL 61
Query: 62 ALVP--TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K + EQ DV VV+AYG+++PQ L+ K G N H SLLP+WRGA
Sbjct: 62 VLQPLSFKKDPQVLEQIRELKPDVIVVIAYGIIVPQEFLDIPKYGCLNIHVSLLPKWRGA 121
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD++TGI IM+MD LDTG + +V I + L + + L ++
Sbjct: 122 APIQRAIQAGDSKTGICIMQMDAGLDTGDILNTLEVEIQDTDTSQSLHDKFAKLSIKPLL 181
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E ++ ++ + PQ TYA KI+K E ++F +SA+ + HIRA +P+P A+ +
Sbjct: 182 ETLENID--TIKPQPQQGE-PTYAHKITKQEGLIDFTKSAKEISCHIRAFTPWPSAFFML 238
Query: 240 MIGNKHE-RIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
++LE + ++ F IA + +R +LQ ++L+I D L
Sbjct: 239 EGEQVKVGDFEILEKSANDEVTAIIDITKNGFDIATNDKIIRFKQLQFPNKKMLNIADIL 298
Query: 299 LGCPVI--IGCIVG 310
G + IG +G
Sbjct: 299 NGKDLDKYIGYKIG 312
>gi|62259769|gb|AAX77868.1| unknown protein [synthetic construct]
Length = 348
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 116/319 (36%), Positives = 168/319 (52%), Gaps = 18/319 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT + + L+ L S H+I +V TQP R G RG K S V + A P
Sbjct: 29 KLNIIFAGTPDISAQVLKDLYKSQHNIQAVLTQPDRAKG-RGKKVQFSPVKEVALANHTP 87
Query: 62 ALVP--TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K E EQ DV VV+AYG+++PQ L+ + G N H SLLP+WRGA
Sbjct: 88 VFQPLSFKKNPEVLEQIKQLKPDVIVVIAYGIIVPQEFLDIPRYGCLNIHVSLLPKWRGA 147
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD +TG+ IM+MD LDTG + ++ I + L + + L ++
Sbjct: 148 APIQRAIQAGDTKTGVCIMQMDAGLDTGDILNTLEIEIQETDTSQTLHDKFAKLSIKPLL 207
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E ++K+E + PQ TYA KI+K E ++F +SA + HIRA +P+PGA+ +
Sbjct: 208 ETLEKIE--IIKPEPQQGE-PTYAHKITKQEGLIDFTKSAWQISCHIRAFTPWPGAYFIL 264
Query: 240 MIGNKHERIKLLESQLV---EGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLD 293
E IK+ E +++ K G +I+ F IA S +R +LQ ++L+
Sbjct: 265 DD----EAIKVGEFEILYQNTDNRKAGTIIDIYRSGFDIATSDKIIRFRQLQFPNKKMLN 320
Query: 294 IGDFLLGCPVI--IGCIVG 310
I D L G + IG +G
Sbjct: 321 IVDILNGKDLDKYIGYKLG 339
>gi|312134886|ref|YP_004002224.1| methionyl-tRNA formyltransferase [Caldicellulosiruptor owensensis
OL]
gi|311774937|gb|ADQ04424.1| methionyl-tRNA formyltransferase [Caldicellulosiruptor owensensis
OL]
Length = 306
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 101/312 (32%), Positives = 160/312 (51%), Gaps = 17/312 (5%)
Query: 8 MGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MGT +FAV LQ L+ ++ V TQP +P G R AV + AQ+ + + P
Sbjct: 1 MGTPDFAVDILQKLIQEPFVNLKLVVTQPDKPVG-RKRILTAPAVKEFAQKVGIEVVQPE 59
Query: 67 KLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
KL E N D VVVAYG ++P+ +L K G N HASLLP +RGAAPIQR
Sbjct: 60 KLKNNEEFFKLLKEINPDTIVVVAYGKILPKEMLEIPKHGCINVHASLLPEYRGAAPIQR 119
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
A+M G TGI IMKMD+ LDTG + ++V I ++ + L ++L+ + +VE +
Sbjct: 120 ALMDGKEYTGITIMKMDEGLDTGDILLQKEVKIENDDDVLTLSKKLAEVGGKLLVETLKN 179
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
++ Q + TYA + K E ++++ +++N RAL +PG + +
Sbjct: 180 IDNI--TPVKQDHSRATYAPPLKKEEGKIDWNMCVSDIYNRFRALKIWPGIFTTF----R 233
Query: 245 HERIKLLESQLVE----GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +K+ E ++V+ + G V+ + + G +R+ LQ GG+ +D DF
Sbjct: 234 GKLLKIHEMEIVQFNITSDIPNGTVVVIDDSGIIVKVRNGFIRLKLLQLEGGKKIDARDF 293
Query: 298 LLGCPVIIGCIV 309
+ G + G I+
Sbjct: 294 VNGYKIKRGDIL 305
>gi|163841092|ref|YP_001625497.1| methionyl-tRNA formyltransferase [Renibacterium salmoninarum ATCC
33209]
gi|189044566|sp|A9WR74|FMT_RENSM RecName: Full=Methionyl-tRNA formyltransferase
gi|162954568|gb|ABY24083.1| methionyl-tRNA formyltransferase [Renibacterium salmoninarum ATCC
33209]
Length = 307
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 92/312 (29%), Positives = 152/312 (48%), Gaps = 10/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT A+ +L+AL+++ +V V T+P P G R S V +A+E LP
Sbjct: 1 MRVLFAGTPAVALPSLEALLAAGFDVVGVLTRPDAPIG-RKRVLAPSPVAARAEELGLPI 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ +L E EQ +VA +VAYG ++P L G+ N H SLLP WRGAAP+
Sbjct: 60 IRANRLDTEVQEQIALLRPEVAAIVAYGALVPPAALTIPDYGWINLHFSLLPAWRGAAPV 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q A++ GD+ TG +++ LDTGPV I + + L LS + + + +
Sbjct: 120 QHAVINGDDVTGAVTFQLEAGLDTGPVFGTVTEFIRRDDTGSALLTRLSHSGSVLLTQTL 179
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ Q ++ A K++ + R++F A V IR ++ PGAW +
Sbjct: 180 SAVAAGTATAIEQ-TGPVSLAPKLTIEDGRIDFSVPALAVSRRIRGVTEEPGAWTVLAG- 237
Query: 243 NKHERIKLLESQLVEG--EGKPGEVINPN--FTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R K+ + L E PG++ + A+ ++ +Q AG +++D D+L
Sbjct: 238 ---QRFKVAAATLRPDRRELAPGQLAQAGKSLLVGTGSHAIELLAVQPAGKKMMDAADWL 294
Query: 299 LGCPVIIGCIVG 310
G ++ G + G
Sbjct: 295 RGVGMVDGMVFG 306
>gi|187931618|ref|YP_001891602.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|238691560|sp|B2SGG5|FMT_FRATM RecName: Full=Methionyl-tRNA formyltransferase
gi|187712527|gb|ACD30824.1| methionyl-tRNA formyltransferase [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 313
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 115/319 (36%), Positives = 168/319 (52%), Gaps = 18/319 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT + + L+ L S ++I +V TQP R G RG K S V + A P
Sbjct: 3 KLNIIFAGTPDISAQVLKDLYKSQYNIQAVLTQPDRAKG-RGKKVQFSPVKEVALANHTP 61
Query: 62 ALVP--TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K E EQ DV VV+AYG+++PQ L+ + G N H SLLP+WRGA
Sbjct: 62 VFQPLSFKKNPEVLEQIKQLKPDVIVVIAYGIIVPQEFLDIPRYGCLNIHVSLLPKWRGA 121
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD +TG+ IM+MD LDTG + ++ I + L + + L ++
Sbjct: 122 APIQRAIQAGDTKTGVCIMQMDAGLDTGDILNTLEIEIQETDTSQTLHDKFAKLSIKPLL 181
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E ++K+E + PQ TYA KI+K E ++F +SA + HIRA +P+PGA+ +
Sbjct: 182 ETLEKIE--IIKPEPQQGE-PTYAHKITKQEGLIDFTKSAWQISCHIRAFTPWPGAYFIL 238
Query: 240 MIGNKHERIKLLESQLV---EGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLD 293
E IK+ E +++ K G +I+ F IA S +R +LQ ++L+
Sbjct: 239 DD----EAIKVGEFEILYQNTDNRKAGTIIDIYRSGFDIATSDKIIRFRQLQFPNKKMLN 294
Query: 294 IGDFLLGCPVI--IGCIVG 310
I D L G + IG +G
Sbjct: 295 IVDILNGKDLDKYIGYKLG 313
>gi|311739503|ref|ZP_07713338.1| methionyl-tRNA formyltransferase [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311305319|gb|EFQ81387.1| methionyl-tRNA formyltransferase [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 315
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 101/311 (32%), Positives = 150/311 (48%), Gaps = 19/311 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E AV L+ L++SSH +V+V T+P G RG S V AQE +
Sbjct: 1 MRIIFAGTPEPAVVALEKLLASSHEVVAVITRPDAKKG-RGRTLHPSPVKALAQEHGIEV 59
Query: 63 LVPTKLGQEEYEQF------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
L PT L + + + VVAYG ++ + +L + G+ N H SLLP W
Sbjct: 60 LTPTTLRPDSEDGQALRSRLKELQPEAIPVVAYGNLVTKDLLELPQHGWINLHFSLLPAW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAP+Q AI AGD+ TG + ++++ LDTGPV I L L+
Sbjct: 120 RGAAPVQAAIAAGDDVTGASTFRIEEGLDTGPVLGTVTEEIKGTDTADDLLTRLAYSGGD 179
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+V MD L L PQ TYA KIS + RV + + A + HIRA +P PGAW
Sbjct: 180 LLVATMDGLAAGQLEAQPQQGE-ATYAPKISTAQARVEWSQPAFAIDRHIRAHTPGPGAW 238
Query: 237 LEMMIGNKHERIKLLESQLVEG-----EGKPGE--VINPNFTIACSQGAVRIMRLQRAGG 289
R+K+ L+E E +PG+ + + V++ ++Q G
Sbjct: 239 T----MWGEARVKIGPVSLIEEVAVPQELEPGQLHIAKNAVFVGTGTQPVQLGKIQAPGK 294
Query: 290 RVLDIGDFLLG 300
++++ D+ G
Sbjct: 295 KMMNAADWARG 305
>gi|114321774|ref|YP_743457.1| methionyl-tRNA formyltransferase [Alkalilimnicola ehrlichii MLHE-1]
gi|122310782|sp|Q0A5C0|FMT_ALHEH RecName: Full=Methionyl-tRNA formyltransferase
gi|114228168|gb|ABI57967.1| methionyl-tRNA formyltransferase [Alkalilimnicola ehrlichii MLHE-1]
Length = 314
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 121/314 (38%), Positives = 176/314 (56%), Gaps = 12/314 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R+VF GT +FAV +LQAL+ + H V+VYTQP R AGR G + S V ++A+ LP
Sbjct: 6 RLVFAGTPDFAVPSLQALLEAGHRPVAVYTQPDRRAGR-GRRPRPSPVKQQAEAQGLPVR 64
Query: 64 VPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P + D+ VV+AYGL++PQ +L LG N HASLLPRWRGAAPI
Sbjct: 65 QPESLRDPRAQAELAELAPDLMVVIAYGLILPQAVLQIPALGCVNLHASLLPRWRGAAPI 124
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI+AGD+ETG+ +M+M+ LDTGPV + PI L L+ L + + +
Sbjct: 125 QRAILAGDDETGVCLMRMEAGLDTGPVLARARCPIGPRETGGSLHDRLAALAGTLLHDRL 184
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D L + LP PQ E G+ YA+K+ K E +++ R A + +RA +P+P A
Sbjct: 185 DDLLADRLPAQPQPEAGVCYADKLRKDEAWLDWRRDARQLDRQVRAFNPWPVAQT----L 240
Query: 243 NKHERIKLLESQLV---EGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + +++ E++ V G+ PG V+ + +GA+R+ LQ AGGR L + +
Sbjct: 241 CQGQVLRVWEAEPVAAPAGDAAPGTVVRADGDGIVVVAGEGALRLQTLQAAGGRPLGVRE 300
Query: 297 FLLGCPVIIGCIVG 310
FL G + G +G
Sbjct: 301 FLNGRALQAGERLG 314
>gi|328952874|ref|YP_004370208.1| Methionyl-tRNA formyltransferase [Desulfobacca acetoxidans DSM
11109]
gi|328453198|gb|AEB09027.1| Methionyl-tRNA formyltransferase [Desulfobacca acetoxidans DSM
11109]
Length = 313
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 96/313 (30%), Positives = 148/313 (47%), Gaps = 7/313 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VFMGT +FA+++ + +++ + +V TQP RP G RG + S V +A +P
Sbjct: 4 PLRLVFMGTPDFALSSFRTVLAGGFKVAAVATQPDRPRG-RGQRVTSSPVKIEAASQGIP 62
Query: 62 ALVPTKL-GQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + D+ +V A+G ++ IL LG N H SLLP +RGAA
Sbjct: 63 VWQPRQRGQADIIPDMQRLQPDLILVAAFGQMLSAEILAIPSLGVLNVHPSLLPLYRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ GD TG++IM M + +D G + PI + L L+ +V+
Sbjct: 123 PINWAIIRGDTLTGVSIMWMTQEMDAGDIFLQETEPIHEDDTAGTLGSRLANRGGRLLVK 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ +E+ + PQ G+ YA ++K +NF R A + IR L P PGA +
Sbjct: 183 ALHAVERGKIIKIPQRSEGVVYAPALTKEMQLLNFGRPALELQRLIRGLDPKPGALTYLH 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + + PG VI +AC G++ + LQ AGGR L +F
Sbjct: 243 -HKVLKVFRPALAAPRPHLPLPGTVIQVSAAGAEVACGDGSLWLQELQPAGGRRLSALEF 301
Query: 298 LLGCPVIIGCIVG 310
G + I +G
Sbjct: 302 SRGRRL-INERLG 313
>gi|307298448|ref|ZP_07578251.1| methionyl-tRNA formyltransferase [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306915613|gb|EFN45997.1| methionyl-tRNA formyltransferase [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 310
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 100/315 (31%), Positives = 161/315 (51%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT EFA + L+ALV S ++ V++QP RP G RG + + V A+ + LP
Sbjct: 1 MNIVFMGTPEFAASHLKALVESGVKVIGVFSQPDRPKG-RGRRVYPTPVKSVAEVYGLPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ E + L + D+ VVVAYG ++ +++ LG +N HASLLP++RGAAP
Sbjct: 60 FQPEKVNSGEGLEKLKELSPDLIVVVAYGKLLKSSVIDLPTLGCFNVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI G+ TGI I K+D+ +DTG +A R++ I + N L ++L L A+++
Sbjct: 120 IQRAIENGETRTGITIFKIDEGMDTGEIALRREIEIEISDNFGSLYEKLERLGREALLDF 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ E + L Q + + +F + + N +RA P PGA +
Sbjct: 180 LKIAEAGRIELCKQEGAPSYAPKVQASDLVISDFSDAVYVL-NKVRAYDPQPGARTSL-- 236
Query: 242 GNKHERIKLLESQLVE------GEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +KL + + +G+ +V + ++C G V I +Q G R +
Sbjct: 237 --DGKMVKLFGAAFSDRSYGKSRDGEIVKVEDHGMVLSCGTGNVIISLVQLPGKRPMSPK 294
Query: 296 DFLLGCPVIIGCIVG 310
D + G + G I+G
Sbjct: 295 DAVSGWLIREGMILG 309
>gi|312127906|ref|YP_003992780.1| methionyl-tRNA formyltransferase [Caldicellulosiruptor
hydrothermalis 108]
gi|311777925|gb|ADQ07411.1| methionyl-tRNA formyltransferase [Caldicellulosiruptor
hydrothermalis 108]
Length = 306
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 17/312 (5%)
Query: 8 MGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MGT +FAV LQ L+ ++ V TQP +P G R AV + AQ+ + + P
Sbjct: 1 MGTPDFAVDILQKLIQEPFVNLKLVVTQPDKPVG-RKRILTAPAVKEFAQKVGIEVVQPE 59
Query: 67 KLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
KL E N D VVVAYG ++P+ +L K G N HASLLP +RGAAPIQR
Sbjct: 60 KLKNNEEFFELLKEINPDTIVVVAYGKILPKEVLEIPKYGCINVHASLLPEYRGAAPIQR 119
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
+M G TGI IMKMD+ LDTG + ++V I ++ + L ++LS + ++E +
Sbjct: 120 VLMDGKEYTGITIMKMDEGLDTGDILLQKEVKIENDDDILTLSKKLSEAGSQLLIEVLKN 179
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
+E Q + TYA I K E ++++ A+ ++N RAL +PG +
Sbjct: 180 IESI--TPVKQDHSRATYAPPIKKEEGKIDWDMCAKEIYNRFRALKMWPGIFTTFKE--- 234
Query: 245 HERIKLLESQLVEGE-------GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +K+ + ++V+ G E+ + + I G +R+ LQ GG+ + DF
Sbjct: 235 -KLLKIHDMEIVQDNIFDSRPNGTVVEIDDSSIIIKVRDGLIRLKLLQLEGGKKIGARDF 293
Query: 298 LLGCPVIIGCIV 309
+ G + G ++
Sbjct: 294 VNGYKIKRGDVL 305
>gi|154175113|ref|YP_001408818.1| methionyl-tRNA formyltransferase [Campylobacter curvus 525.92]
gi|259646024|sp|A7H026|FMT_CAMC5 RecName: Full=Methionyl-tRNA formyltransferase
gi|112803697|gb|EAU01041.1| methionyl-tRNA formyltransferase [Campylobacter curvus 525.92]
Length = 301
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 89/312 (28%), Positives = 141/312 (45%), Gaps = 17/312 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ ++FMGT +A L ALV + + V+TQP +P G R S V AQ+ +LP
Sbjct: 1 MNIIFMGTPAYARTILDALVRAGIGVAGVFTQPDKPVG-RKQILTPSEVKIYAQQ-NLPH 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNA--TKLGFYNGHASLLPRWRGAA 120
+ + + + + + + N HAS+LP++RGA+
Sbjct: 59 AKIFQPKTLKEGTVAAEILALKPDFIVVAAYGKILPKSVLDIAPCINLHASILPKYRGAS 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ G+ TG+ M MD+ LDTG + V + + + A+
Sbjct: 119 PIQAALLNGEKNTGVTAMLMDEGLDTGDMLGFTHVSCEGKRSAEMFEILGELAGELAVKT 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
D NL Q + T+ +KI K + VN AE ++N RA +PG +LE
Sbjct: 179 LFDFK---NLTPQKQDDALATHCKKIQKSDGLVNLSEDAEQIYNKFRAFHEWPGVFLESG 235
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ K LE L EG G GE++ F +AC GA++I+ LQ AG + LD +
Sbjct: 236 L-------KFLELNLAEGSGAAGEILRIEKDGFVVACGTGALKILALQEAGKKALDAKAY 288
Query: 298 LLGCPVIIGCIV 309
+ G ++ G +
Sbjct: 289 INGKRLVAGNKI 300
>gi|222099116|ref|YP_002533684.1| Methionyl-tRNA formyltransferase [Thermotoga neapolitana DSM 4359]
gi|254789378|sp|B9KBC2|FMT_THENN RecName: Full=Methionyl-tRNA formyltransferase
gi|221571506|gb|ACM22318.1| Methionyl-tRNA formyltransferase [Thermotoga neapolitana DSM 4359]
Length = 313
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 109/312 (34%), Positives = 165/312 (52%), Gaps = 10/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVF+GT EFA L+ +V +IV V TQP +P G RG K++ + V A+E LP
Sbjct: 1 MRVVFVGTPEFAAEILRYMVKKGINIVGVVTQPDKPKG-RGRKTLPTPVKVVAEEKGLPC 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P + ++E E S N DV +V +YG ++ +++L+ K G YN H SLLP++RGA+P
Sbjct: 60 IQPESINRKEALEFLHSVNPDVLIVASYGKILGEKVLSLPKHGCYNIHPSLLPKYRGASP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+ G+ +TG+ I +M K LD GP+A R+V I L++ L L ++E
Sbjct: 120 IQRALENGEKKTGVTIYRMVKELDAGPIALQREVNIDPFETFDQLEKRLIELSKEMVIEF 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++KLE + L Q TYA I K + V+F + AE V N IRA PGA +
Sbjct: 180 LEKLENGEIHLREQDHTRATYAPLIKKEDLFVDFSKGAETVKNKIRAYDSRPGARAFL-- 237
Query: 242 GNKHERIKLLESQLVE-GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +KL + V+ +PG + I +G V++ LQ G + L +
Sbjct: 238 --NGKEVKLFGAMAVDSSNDEPGLIHYIDREGAWIGTGKGMVKVKYLQLPGKKKLTFWEL 295
Query: 298 LLGCPVIIGCIV 309
G + G +
Sbjct: 296 RNGRLIEEGMKL 307
>gi|300088798|ref|YP_003759320.1| methionyl-tRNA formyltransferase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299528531|gb|ADJ26999.1| methionyl-tRNA formyltransferase [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 318
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 104/312 (33%), Positives = 161/312 (51%), Gaps = 10/312 (3%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
+VFMGT +FAV L+ L + +V+VYT+P P+G RG S V +A+ L
Sbjct: 9 IVFMGTPDFAVPALEGLAGEGYDVVAVYTRPDAPSG-RGRNLTASPVKHRAESLRLAVRQ 67
Query: 65 PTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P L E + L+ D+ VV AYGL++P +L +LG N HASLLPR+RGA+P+
Sbjct: 68 PGSLRSPEELERLADLQPDLVVVAAYGLILPSPVLAIPRLGCINIHASLLPRYRGASPVA 127
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
AI AGD +G++IMKMDK +DTG V + PI ++ T L L+++ A ++ +
Sbjct: 128 AAIAAGDRFSGVSIMKMDKGIDTGDVYTRAQTPIFAHDTTGSLTGRLAIIGAALTLDVLP 187
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
++ + PQ + ++YA ++K +++ AE + IRAL P+PGA
Sbjct: 188 QILSGTIKPHPQPTDNVSYAPMLTKKAGLIDWSEPAEVIWRRIRALQPWPGATTRWGDRP 247
Query: 244 KHERIKLLESQLVEGEGKPGEVINPNFT------IACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + + PG ++ N ++ G + I+RLQ AG R +F
Sbjct: 248 IKLLETI--PLNIPADKPPGTIVTGNPDMAVPWAVSTGAGLLGIVRLQSAGKRPATGAEF 305
Query: 298 LLGCPVIIGCIV 309
L G +IG I
Sbjct: 306 LRGQRNLIGSIF 317
>gi|29839859|ref|NP_828965.1| methionyl-tRNA formyltransferase [Chlamydophila caviae GPIC]
gi|33301125|sp|Q824Q3|FMT_CHLCV RecName: Full=Methionyl-tRNA formyltransferase
gi|29834206|gb|AAP04843.1| methionyl-tRNA formyltransferase [Chlamydophila caviae GPIC]
Length = 321
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 100/307 (32%), Positives = 166/307 (54%), Gaps = 9/307 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L+V++ GT +FA L+ L+ +++ V T+ +P +R + + S V A ++P
Sbjct: 4 LKVIYFGTPQFAATVLEDLLHHDVNVIGVVTRVDKPQ-KRSSQPIPSPVKTLALSKNIPL 62
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K ++ + +F ADV +VVAYG ++ Q +LN K G YN HA LLP +RGAAP
Sbjct: 63 LQPEKASDPQFIEQLKAFEADVFIVVAYGAILRQVVLNIPKYGCYNLHAGLLPAYRGAAP 122
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQR IM G ++G +++MD +DTG +A + VP+ ++ L + LS +++
Sbjct: 123 IQRCIMDGVTQSGNTVIRMDAGMDTGDIAGVSYVPVGPDMTAGELAEALSAQGGEILIKT 182
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ + +PQ + + A K+SK E V + AE V+ IR ++P PGAW
Sbjct: 183 LQQISDGTISHTPQDSSKASIAPKLSKEEGFVLWNHPAEKVYAQIRGVTPAPGAWTLYSY 242
Query: 242 GNKH-ERIKLLESQLVEGEG---KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+K +R+ + ++ L +G PG+VI IAC++GA+ + +Q G +D
Sbjct: 243 QDKPAKRLVIRKASLASNKGIYGNPGDVIVSDQQELLIACAEGAICLKEIQPEGKGAMDS 302
Query: 295 GDFLLGC 301
FL G
Sbjct: 303 KTFLNGH 309
>gi|26553502|ref|NP_757436.1| methionyl-tRNA formyltransferase [Mycoplasma penetrans HF-2]
gi|33516869|sp|Q8EX00|FMT_MYCPE RecName: Full=Methionyl-tRNA formyltransferase
gi|26453508|dbj|BAC43840.1| methionyl-tRNA formyltransferase [Mycoplasma penetrans HF-2]
Length = 318
Score = 150 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 92/310 (29%), Positives = 153/310 (49%), Gaps = 8/310 (2%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
++VFMGT E A L AL+ S +V+V QP +P G R + + S+V K A E ++
Sbjct: 12 KIVFMGTPEIATYALNALLEKSFDVVAVVCQPDKPIG-RKKEIIFSSVKKLAIEKNIKFF 70
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K+ + + N V A+G IP IL+ + G N HASLLP++RG API
Sbjct: 71 QPNKIKE-IENELKELNPFAFVTCAFGQFIPDSILSIPEFGCINIHASLLPKYRGGAPIH 129
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
A++ G+ ETG+ +M+ K +D G V RKV I + T+ L ++++ L ++ ++
Sbjct: 130 WAVINGEKETGVCLMRTIKQMDAGDVYCSRKVNIEESDTTSTLFKKMNNLVYDIVLNDLE 189
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ P Q E+ +++A ISK + ++NF ++A + N IR LS PGA+ +
Sbjct: 190 KVFNLEYPPIKQDESKVSFAYNISKDDEKINFEKNAVEIVNLIRGLSETPGAYCFINDKK 249
Query: 244 KHERIKLLESQLVEGEGKPGE---VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ S + PG + I+ + + +Q G ++ + L G
Sbjct: 250 MKLFKAV--STNSKSNNAPGTINNISKEGILISTKDFDILVKEVQIEGKNRQEVKNILNG 307
Query: 301 CP-VIIGCIV 309
+ IG +
Sbjct: 308 NSEIKIGVTL 317
>gi|189347170|ref|YP_001943699.1| methionyl-tRNA formyltransferase [Chlorobium limicola DSM 245]
gi|229464465|sp|B3EE18|FMT_CHLL2 RecName: Full=Methionyl-tRNA formyltransferase
gi|189341317|gb|ACD90720.1| methionyl-tRNA formyltransferase [Chlorobium limicola DSM 245]
Length = 318
Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 86/311 (27%), Positives = 153/311 (49%), Gaps = 15/311 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH--SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+R+VFMGT +FAV +LQ + S +H IV V T +P ++ + V + A E L
Sbjct: 1 MRIVFMGTPDFAVPSLQRIASENHDFEIVLVVTGRDKPRRKKNALPEPTPVKQSALELGL 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E+ + + +VVA ++P + + +LG +N HASLLP +RGAA
Sbjct: 61 PVYETDDPSSAEFASVVLASRPDVIVVAAFRILPPAVFSIARLGAFNLHASLLPAYRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G+ TG+ + + +DTG + V I+ + N L ++LSV A +VE
Sbjct: 121 PINWAIIRGEKVTGVTTFFLQEKVDTGSMILTENVTIAEDDNATRLAEKLSVKGAALVVE 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + N+ + Q ++ + A K++K TR+ + + + + IR L+ P AW M
Sbjct: 181 TLHLINAGNVSVKKQDDSLASKAPKLTKENTRIRWNSRSAELCDFIRGLAMKPAAWTTM- 239
Query: 241 IGNKHERIKLLESQLVEGEG-------KPGE--VINPNFTIACSQGAVRIMRLQRAGGRV 291
+ +K+ ++ +E +PG + + + G + + +LQ G ++
Sbjct: 240 ---DGKTLKVYKAVPLESPISLPERGREPGLVYIDDSRLLVGTVDGWISLQQLQLEGKKI 296
Query: 292 LDIGDFLLGCP 302
++ +FL G
Sbjct: 297 MEAQEFLRGFR 307
>gi|145594412|ref|YP_001158709.1| methionyl-tRNA formyltransferase [Salinispora tropica CNB-440]
gi|189044561|sp|A4X631|FMT_SALTO RecName: Full=Methionyl-tRNA formyltransferase
gi|145303749|gb|ABP54331.1| methionyl-tRNA formyltransferase [Salinispora tropica CNB-440]
Length = 308
Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 100/312 (32%), Positives = 159/312 (50%), Gaps = 10/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT AV TL A+ +S H +V+V T+P PAG RG S V A E +
Sbjct: 1 MRVIFAGTPAVAVPTLAAVAASRHDLVAVLTRPDAPAG-RGRGLSRSPVGAWADEHGIEV 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + + E+ ++ + D VVAYG ++P L + G+ N H SLLP WRGAAP
Sbjct: 60 LTPARPREPEFLDRLRALAPDCVPVVAYGALVPPAALEIPRHGWVNLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A++ GD TG ++ ++++ LDTGPV + + L + L+ A ++
Sbjct: 120 VQHALLHGDELTGASVFQLEEGLDTGPVYGTVTDEVRPADTSGDLLERLAHSGAELLIAV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D +E+ + PQ +G++ A K++ + RV + A V +RA SP PG W
Sbjct: 180 LDAIEEGSARAEPQPNDGVSLAPKLTVADARVRWGDPAFAVDRRVRACSPAPGPWTTFRD 239
Query: 242 GNKHERIKLLESQLVEG--EGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
ER+KL LV G E +PGE++ + V++ ++ AG + + D+
Sbjct: 240 ----ERVKLGPVTLVAGGPELRPGELLVEKSRVLAGTASTPVQLGEIRAAGKKAMPASDW 295
Query: 298 LLGCPVIIGCIV 309
G V G ++
Sbjct: 296 ARGVRVTAGEVL 307
>gi|327398773|ref|YP_004339642.1| methionyl-tRNA formyltransferase [Hippea maritima DSM 10411]
gi|327181402|gb|AEA33583.1| Methionyl-tRNA formyltransferase [Hippea maritima DSM 10411]
Length = 309
Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+RV+F GTSEFA L+AL+ S +V + + P G+RG K + + A E+ L
Sbjct: 1 MRVLFFGTSEFAKEPLEALIKSKQFDVVGLISTPDAK-GKRGKKLLQPPTKEVALEYGLE 59
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVV--VAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P KL EE + V + + N H S+LP++RG
Sbjct: 60 VFQPEKLKTEETINKIKEFNADVFVVVSYGKFIPNDILQLPNLKKSINIHPSILPKYRGP 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI A++ GD+ TG++++ + +D G + I N L LS + + ++
Sbjct: 120 SPINYALLNGDDYTGVSLIDVIDRMDAGDIYMQWIEKIYPEDNYKTLHDRLSQIGSKMIL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
A++ ++ + + T K G+ +A+ + N I+A +P A+ +
Sbjct: 180 CALENIDNLKPKVQDENLATYTKIIKKEDGQIDFK-NETAQQIINKIKAFYVWPTAYFYL 238
Query: 240 MIGNKHERIKLLESQLVEGE-GKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ K+ E+QL++ + KP +VI I C + A+ I +Q + + I
Sbjct: 239 EG----KMFKIFEAQLIKTDITKPAQVIKASKKELIIGCKEDAISIKTIQPQSKKAMPIE 294
Query: 296 DFLLGCPVIIGC 307
FL G G
Sbjct: 295 AFLAGYKFNAGQ 306
>gi|240172781|ref|ZP_04751440.1| methionyl-tRNA formyltransferase [Mycobacterium kansasii ATCC
12478]
Length = 312
Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 94/311 (30%), Positives = 143/311 (45%), Gaps = 6/311 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+ L+ L+ S H +V+V T+P +GRRG S V ++A + +P
Sbjct: 1 MRIVFAGTPEPALPALRRLIDSPRHDVVAVLTRPDAASGRRGR-PEPSPVAREALDRGIP 59
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGL-VIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P++ E+ LS A V ++ +L G+ N H SLLP WRGAA
Sbjct: 60 VLRPSRPNSPEFVAELSKLAPQCCAVVAYGALLGDALLAIPPYGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG +++ LD+GPV + I L + L+V A +
Sbjct: 120 PVQAAIAAGDTITGATTFQIEPSLDSGPVYGVVTEAIRPTDTAGDLLERLAVSGAALLSA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + L PQ +G++ A KI+ + RV + A V IRA++P PGAW +
Sbjct: 180 TLDGIADQTLTPRPQPADGVSLAPKITVEQARVRWELPAAVVERRIRAVTPNPGAWTLIG 239
Query: 241 IGNKHERIKLLESQLVEGEG-KPGEVINPN--FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
L+ E PG + I VR+ ++Q G + + D+
Sbjct: 240 DLRVKLGPVQLDGAPRPPELLPPGAIHVDRTTVWIGTGSEPVRLGQIQPPGKKPMQAADW 299
Query: 298 LLGCPVIIGCI 308
G + G
Sbjct: 300 ARGARLDPGAR 310
>gi|108804304|ref|YP_644241.1| methionyl-tRNA formyltransferase [Rubrobacter xylanophilus DSM
9941]
gi|123368145|sp|Q1AVZ9|FMT_RUBXD RecName: Full=Methionyl-tRNA formyltransferase
gi|108765547|gb|ABG04429.1| methionyl-tRNA formyltransferase [Rubrobacter xylanophilus DSM
9941]
Length = 306
Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 114/307 (37%), Positives = 166/307 (54%), Gaps = 11/307 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV F GT EFA L+ L+ S H + V +QP P G RG ++ V A+E LP
Sbjct: 1 MRVAFAGTPEFAATVLRGLLGSGHEVGLVISQPDAPRG-RGRRTASPPVALLAREAGLPL 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P + + E D VV AYG ++ L A + G YN HASLLP +RGAAP+
Sbjct: 60 LQPASISEAAGEI---SRHDALVVAAYGQILRPDTLYAARHGAYNVHASLLPAYRGAAPV 116
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
+RAIM G+ ETG+ +++MD+ LDTGPVA R+VPI ++ L L+ + A A+VE +
Sbjct: 117 ERAIMDGERETGVTVIRMDEGLDTGPVALQRRVPIPPDMTGGELADLLARVGAEALVEVL 176
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D+LE L L+ Q + +YA +I++ + +++ R A VH+ +RALSP GA
Sbjct: 177 DRLESGTLNLTRQDSSRASYAPRITRQDQEIDWSRDARRVHDQVRALSPHIGARTRHPEV 236
Query: 243 NKHERIKLLESQLVEGEG---KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
K+ +++ G PGE+ + + C G V I+ LQ GGR L +F
Sbjct: 237 EGPL--KIWRTRVHREAGRELAPGELRAGDGRLFVGCESGVVEILELQLPGGRRLGAAEF 294
Query: 298 LLGCPVI 304
L G +
Sbjct: 295 LRGHSLT 301
>gi|228471361|ref|ZP_04056162.1| methionyl-tRNA formyltransferase [Porphyromonas uenonis 60-3]
gi|228306862|gb|EEK15975.1| methionyl-tRNA formyltransferase [Porphyromonas uenonis 60-3]
Length = 324
Score = 150 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 98/322 (30%), Positives = 159/322 (49%), Gaps = 15/322 (4%)
Query: 1 MTL---RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M R++F GT+ FA A L+ LV + IV+V T P +PAG RG + SAV A +
Sbjct: 1 MKKDQVRIIFYGTAPFATACLERLVDEGYPIVAVVTAPDKPAG-RGHRLQPSAVKVCATK 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L PT L E + Q L+ VV ++P+ + + G N H SLLP++R
Sbjct: 60 LGLPILQPTNLRDEAFVQQLTELKPTLGVVVAFRMLPREVWSLPPWGTVNIHGSLLPQYR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH- 176
GAAPI A++ G+ ETG+ + ++ +DTG + PI + L +L L A
Sbjct: 120 GAAPINWALINGERETGVTLFQLRHEIDTGDIIAASACPIEPEDDFGTLYDKLMALGAEL 179
Query: 177 --AMVEAMDKLEQNNLPLSPQIENGI-TYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ + + + PQ E+ A K++K TR+++ +SA +HN +R L+P P
Sbjct: 180 LAHGLSLLMQHDGRYPQALPQEEHPDLRPAPKLTKENTRIDWHQSAHEIHNLVRGLAPQP 239
Query: 234 GAWLEMMIGN-KHERIKLLESQLVEGEG---KPGEVI---NPNFTIACSQGAVRIMRLQR 286
GAW + + N + +K+ + L + E G+ + + C G + I +L+
Sbjct: 240 GAWTMLELPNEEPLLVKIYATTLPQQEANERPVGQCLSPRKGQLAVQCGDGLLLIDQLKP 299
Query: 287 AGGRVLDIGDFLLGCPVIIGCI 308
G ++L D+L G V + +
Sbjct: 300 QGKKLLSARDWLNGLKVSVEEV 321
>gi|270308889|ref|YP_003330947.1| methionyl-tRNA formyltransferase [Dehalococcoides sp. VS]
gi|270154781|gb|ACZ62619.1| methionyl-tRNA formyltransferase [Dehalococcoides sp. VS]
Length = 320
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 101/314 (32%), Positives = 154/314 (49%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMG+ EFA+ L+ L++ + I VYTQP RPAG RG + V A E L
Sbjct: 12 LRIVFMGSPEFALTPLKMLLAEGYDICGVYTQPDRPAG-RGRELCPPPVKALALEHGLAV 70
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L + E + LS DV V AYGL++PQ +L+ G N H SLLPR+RGA P
Sbjct: 71 YQPQSLKKPEEQAVLSGLKPDVIAVAAYGLILPQAVLDIPIYGVLNIHPSLLPRYRGATP 130
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ GD G+++MK++ LDTGPV +P+ T L +L+ + ++E
Sbjct: 131 VAATLLGGDEWAGVSLMKLEAGLDTGPVYSRAAIPVRPEDTTPLLADKLAFIGGCLLLEL 190
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ P Q TY ++K +VN+ A + +RA SP+PG +
Sbjct: 191 LSRIPSLPQPEL-QDNAKATYFGMVTKDMGQVNWQTPAAEIERRVRAFSPWPGVFTLY-- 247
Query: 242 GNKHERIKLLESQLVE--GEGKPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+LE+ + +P +V + + G + I+RLQ G D
Sbjct: 248 --NQKTLKILEASPQKLGLGLQPSQVRVYEGDRIMVGSASGELEIIRLQLEGKAACSAAD 305
Query: 297 FLLGCPVIIGCIVG 310
FL G G +G
Sbjct: 306 FLRGQRHFDGAYLG 319
>gi|270285611|ref|ZP_06195005.1| methionyl-tRNA formyltransferase [Chlamydia muridarum Nigg]
gi|270289621|ref|ZP_06195923.1| methionyl-tRNA formyltransferase [Chlamydia muridarum Weiss]
gi|301337007|ref|ZP_07225209.1| methionyl-tRNA formyltransferase [Chlamydia muridarum MopnTet14]
Length = 315
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 106/307 (34%), Positives = 166/307 (54%), Gaps = 8/307 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M LRVV++GT +FA L+ LV + +V V T+ +P +R K + S V + A ++
Sbjct: 1 MNLRVVYLGTPQFAATVLETLVDARIHVVGVVTRADKPQ-KRSSKPIASPVKQLALSKNI 59
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L PTK + Q + ADV VVVAYG+++ Q +L+ K G YN HA LLP +RGA
Sbjct: 60 PLLQPTKTTDPAFLAQLREWQADVFVVVAYGVILKQELLDIPKYGCYNLHAGLLPAYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQR I+AG+ +G +++MD +DTG +A + V I ++ L + L+ ++
Sbjct: 120 APIQRCIIAGETLSGNTVIRMDAGMDTGDIANVNHVAIGEDMTAGELAEALAGSGGELIL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++E + PQ T A K++K E V + A V+ HIR +SP PGAW
Sbjct: 180 KTLQEIEAGTVRHIPQDSAKATLAPKLTKEEGLVKWDAPASQVYAHIRGVSPAPGAWTRF 239
Query: 240 MIG-NKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + R+ +L +++ G PGEV+ + +AC QG +R+ +Q G +
Sbjct: 240 LSQGKEPRRLGILSARMESSSGSHSPGEVLGVSGEDLLVACRQGVLRLCIVQPEGKVFMK 299
Query: 294 IGDFLLG 300
DF G
Sbjct: 300 AKDFFNG 306
>gi|28378316|ref|NP_785208.1| methionyl-tRNA formyltransferase [Lactobacillus plantarum WCFS1]
gi|254556523|ref|YP_003062940.1| methionyl-tRNA formyltransferase [Lactobacillus plantarum JDM1]
gi|33516859|sp|Q88WL3|FMT_LACPL RecName: Full=Methionyl-tRNA formyltransferase
gi|28271151|emb|CAD64056.1| methionyl-tRNA formyltransferase [Lactobacillus plantarum WCFS1]
gi|254045450|gb|ACT62243.1| methionyl-tRNA formyltransferase [Lactobacillus plantarum JDM1]
Length = 317
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 97/315 (30%), Positives = 158/315 (50%), Gaps = 16/315 (5%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
+VFMGT FA L++L+ + ++ V TQP R G R S V + A +P
Sbjct: 4 IVFMGTPAFAAPILESLIKEQYQVLGVVTQPDRKVG-RKHVLTASPVKEVAVAHDIPVFQ 62
Query: 65 PTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K+ E +Q + D+ V A+G +P ++L A K+G N H SLLP++RG AP+Q
Sbjct: 63 PEKISGSPEMQQIIDLQPDLIVTAAFGQFLPTKLLKAAKIGAVNVHGSLLPKYRGGAPVQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+I+ G++ETGI I+ M K +D G + R +PI N +T + +LS++ ++E +
Sbjct: 123 YSIINGESETGITIIYMVKKMDAGDMLAQRAIPIEKNDDTGTMFDKLSLVGRDLLLETLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFC-RSAENVHNHIRALSPFPGAWLEMMIG 242
KL + PQ E+ +T+A I + ++F ++A + N +R + P P A+ +
Sbjct: 183 KLIAGEITAVPQDESQVTFAPNIQPEQEVLDFFTKTAVEIDNQVRGMRPAPIAYAVL--- 239
Query: 243 NKHERIKLLESQLVEGE---GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIG 295
+R K + + E PG+V+ IA + A+ I +LQ AG + I
Sbjct: 240 -DGKRTKFWDVTPLADEVVTQAPGQVVRKTKHELVIAAADHTAIAINQLQPAGKPKMTIT 298
Query: 296 DFLLGC--PVIIGCI 308
D+L G G
Sbjct: 299 DYLNGAADKFATGEQ 313
>gi|785041|emb|CAA88897.1| L-methionyl-tRNA-fMet N-formyltransferase [Rickettsia prowazekii]
Length = 293
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 103/300 (34%), Positives = 161/300 (53%), Gaps = 11/300 (3%)
Query: 13 FAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK-LGQE 71
FAV TL+ L+ H + +V+TQ P+ G RGL S +H+ A E +P P+ E
Sbjct: 1 FAVPTLKKLI-IHHEVKAVFTQQPKAKG-RGLHLAKSPIHQLAFEHQIPVYSPSTLRNDE 58
Query: 72 EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDN 131
+AD+ VV+AYG ++P+ IL A K G N H S LPR RGAAP+QR I+ GD
Sbjct: 59 TINLIKKIDADIIVVIAYGFIVPKAILEAKKYGCLNIHPSDLPRHRGAAPLQRTIIEGDR 118
Query: 132 ETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLP 191
++ + IM+MD LDTG + + + I L + + L A +++ + ++
Sbjct: 119 KSSVCIMRMDSGLDTGDILLKEDLNLERRITLDELSNKCAHLGAELLIKTLANIDNI--V 176
Query: 192 LSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLL 251
Q NGITYA K++K E ++N+ SA ++ IR ++P+PGA+ + IK+L
Sbjct: 177 PIKQSSNGITYAHKLTKAEGKINWYESAYSIDCKIRGMNPWPGAYFSY----NDKIIKIL 232
Query: 252 ESQLVEGEGK--PGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
++ PG VIN IAC G +R+ +LQ+ + L+I +FL G ++ I+
Sbjct: 233 RAEYFNYNHHFIPGTVINNKLEIACGSGILRVKKLQQESKKALNIEEFLRGTNILKDTIL 292
>gi|317495214|ref|ZP_07953584.1| methionyl-tRNA formyltransferase [Gemella moribillum M424]
gi|316914636|gb|EFV36112.1| methionyl-tRNA formyltransferase [Gemella moribillum M424]
Length = 320
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 92/320 (28%), Positives = 156/320 (48%), Gaps = 17/320 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++VFMGT +FAV L+ L+ + + V TQP + G R V A+E +
Sbjct: 3 KKKIVFMGTPKFAVPVLEMLIE-KYGVDLVITQPDKKVG-RKKVLTAPPVKVIAEEKGIK 60
Query: 62 ALVPTKLGQEEYE--QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ +E + N D+ + AYG ++P+ IL K N H SLLP+ RG
Sbjct: 61 VLQPEKISNDENVLSELKELNPDIIITAAYGQLVPETILEIPKYKCINVHGSLLPKLRGG 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ +I+ +TGI IM M K LD G + +V I + N L +LS+ +
Sbjct: 121 APIQYSILEDHEKTGITIMYMVKKLDAGDMISKVEVDILDSDNYESLHDKLSIAGRDLLK 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + N+ Q ++ T+A I + + ++++ +SA + N +RAL P PGA+ +
Sbjct: 181 ETLPNIFTGNIAPEKQDDSLATFARNILREDEKIDWNKSAREIFNQVRALDPTPGAFTYL 240
Query: 240 MIGNKHERIKLLESQLVE-----GEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGR 290
+K+ S++V+ K G +I + + C + +++ LQ +G +
Sbjct: 241 DEN----VLKIWSSEVVDLEENFSSKKVGTIIKQDKKHIYLLCGENTVLKVKELQISGKK 296
Query: 291 VLDIGDFLLGCPVIIGCIVG 310
+ + +FL +G I+G
Sbjct: 297 RMPVVNFLSNKKDYVGTILG 316
>gi|308180466|ref|YP_003924594.1| methionyl-tRNA formyltransferase [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|308045957|gb|ADN98500.1| methionyl-tRNA formyltransferase [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 317
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 97/315 (30%), Positives = 158/315 (50%), Gaps = 16/315 (5%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
+VFMGT FA L++L+ + ++ V TQP R G R S V + A +P
Sbjct: 4 IVFMGTPAFAAPILESLIKEQYQVLGVVTQPDRKVG-RKHVLTASPVKEVAVAHDIPVFQ 62
Query: 65 PTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K+ E +Q + D+ V A+G +P ++L A K+G N H SLLP++RG AP+Q
Sbjct: 63 PEKISGSPEMQQIIDLQPDLIVTAAFGQFLPTKLLKAAKIGAVNVHGSLLPKYRGGAPVQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+I+ G++ETGI I+ M K +D G + R +PI N +T + +LS++ ++E +
Sbjct: 123 YSIINGESETGITIIYMVKKMDAGDMLAQRAIPIEKNDDTGTMFDKLSLVGRDLLLETLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFC-RSAENVHNHIRALSPFPGAWLEMMIG 242
KL + PQ E+ +T+A I + ++F ++A + N +R + P P A+ +
Sbjct: 183 KLIAGEITAVPQDESQVTFAPNIRPEQEVLDFFTKTAVEIDNQVRGMRPAPIAYAVL--- 239
Query: 243 NKHERIKLLESQLVEGE---GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIG 295
+R K + + E PG+V+ IA + A+ I +LQ AG + I
Sbjct: 240 -DGKRTKFWDVTPLADEVVTQAPGQVVRKTKHELVIAAADHTAIAINQLQPAGKPKMTIT 298
Query: 296 DFLLGC--PVIIGCI 308
D+L G G
Sbjct: 299 DYLNGAADKFATGEQ 313
>gi|258645367|ref|ZP_05732836.1| methionyl-tRNA formyltransferase [Dialister invisus DSM 15470]
gi|260402716|gb|EEW96263.1| methionyl-tRNA formyltransferase [Dialister invisus DSM 15470]
Length = 315
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 99/315 (31%), Positives = 160/315 (50%), Gaps = 12/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
R++FMGT +FA L+ L + + ++VYTQP + G RG + S V K A E ++P
Sbjct: 4 PYRIIFMGTPDFAAVQLKTLCENGYRPIAVYTQPDKING-RGNRITFSDVKKLAMEENIP 62
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
PT E+ + L+ D+ +VVAYG ++P +++A G N HASLLP +RG+A
Sbjct: 63 VYQPTTFKSEDTIRELAALKPDLIIVVAYGKILPVAVIDAAVYGAINIHASLLPEYRGSA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI+ +ETGI+IMK+D +DTG + M + I ++ L + LSVL A ++
Sbjct: 123 PIQRAIIDRKSETGISIMKLDAGMDTGDIIRMAPLKILPHMTAGELFESLSVLGAKELLY 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L ++ PQ TYAEK++K +++ + A + IR + P PG +
Sbjct: 183 VLKNLPESMAGAKPQDHAKATYAEKVTKEMGHIDWEQEASVIDALIRGMYPSPGTYTYF- 241
Query: 241 IGNKHERIKLLESQLVEGEGKP---GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+RIK+ + G V+ + N +A + G + + +Q + +
Sbjct: 242 ---HGKRIKIHAAFYENSNTAAIPKGTVVSLKDGNIGVAATHGIIYLTMVQPENHKRMKT 298
Query: 295 GDFLLGCPVIIGCIV 309
DF+ G V
Sbjct: 299 IDFINGYQVKTNDCF 313
>gi|300767252|ref|ZP_07077164.1| methionyl-tRNA formyltransferase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|300495071|gb|EFK30227.1| methionyl-tRNA formyltransferase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
Length = 325
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 97/315 (30%), Positives = 158/315 (50%), Gaps = 16/315 (5%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
+VFMGT FA L++L+ + ++ V TQP R G R S V + A +P
Sbjct: 12 IVFMGTPAFAAPILESLIKEQYQVLGVVTQPDRKVG-RKHVLTASPVKEVAVAHDIPVFQ 70
Query: 65 PTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K+ E +Q + D+ V A+G +P ++L A K+G N H SLLP++RG AP+Q
Sbjct: 71 PEKISGSPEMQQIIDLQPDLIVTAAFGQFLPTKLLKAAKIGAVNVHGSLLPKYRGGAPVQ 130
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+I+ G++ETGI I+ M K +D G + R +PI N +T + +LS++ ++E +
Sbjct: 131 YSIINGESETGITIIYMVKKMDAGDMLAQRAIPIEKNDDTGTMFDKLSLVGRDLLLETLP 190
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFC-RSAENVHNHIRALSPFPGAWLEMMIG 242
KL + PQ E+ +T+A I + ++F ++A + N +R + P P A+ +
Sbjct: 191 KLIAGEITAVPQDESQVTFAPNIRPEQEVLDFFTKTAVEIDNQVRGMRPAPIAYAVL--- 247
Query: 243 NKHERIKLLESQLVEGE---GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIG 295
+R K + + E PG+V+ IA + A+ I +LQ AG + I
Sbjct: 248 -DGKRTKFWDVTPLADEVVTQAPGQVVRKTKHELVIAAADHTAIAINQLQPAGKPKMTIT 306
Query: 296 DFLLGC--PVIIGCI 308
D+L G G
Sbjct: 307 DYLNGAADKFATGEQ 321
>gi|294053789|ref|YP_003547447.1| Methionyl-tRNA formyltransferase [Coraliomargarita akajimensis DSM
45221]
gi|293613122|gb|ADE53277.1| Methionyl-tRNA formyltransferase [Coraliomargarita akajimensis DSM
45221]
Length = 326
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 153/312 (49%), Gaps = 12/312 (3%)
Query: 5 VVFMGTSEFAVATLQALVSSSHS---IVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
VVF G+ + L L+ + +V +QP R G RG K + V A+E +
Sbjct: 7 VVFFGSDAICLPFLNYLLLEGREQCTVRAVVSQPDRRQG-RGKKLQPNPVSAWAREHGIE 65
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K G++ E + V+AYG +P+ + A + G N H S+LP +RGA+P
Sbjct: 66 LLQPDKPGKDLAEWLQDEQIALCFVMAYGHFLPKSVREAAEHGMVNFHGSILPDYRGASP 125
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
++ A+ G+ TG+++M++ + +D G VA + VPI L+ ++ M
Sbjct: 126 VETALALGEETTGVSLMEVVREMDAGGVADVEVVPIDLTDTGPSLRVKIGEAVVPLMRRN 185
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + L Q + ++ KI K + +F ++A + +RA++P+PG + E
Sbjct: 186 LRQAVTGGLHFVAQDASRASFCRKIFKDDAAFDFNQTATALCARLRAMTPWPGGYFEYAS 245
Query: 242 GNKHERIKLLESQLVEG--EGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
ER+K+ ++ G + G ++ +AC++G ++ +LQR GGR+L +F
Sbjct: 246 ----ERVKVGACSILPGPSQAPVGTILAAEDAVQVACAEGVIQFDQLQRPGGRMLPAAEF 301
Query: 298 LLGCPVIIGCIV 309
L G P+ +G +
Sbjct: 302 LRGFPIEVGTQL 313
>gi|312622712|ref|YP_004024325.1| methionyl-tRNA formyltransferase [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203179|gb|ADQ46506.1| methionyl-tRNA formyltransferase [Caldicellulosiruptor
kronotskyensis 2002]
Length = 309
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 100/315 (31%), Positives = 158/315 (50%), Gaps = 20/315 (6%)
Query: 8 MGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MGT +FAV LQ L+ ++ V TQP +P G R AV + AQ+ + + P
Sbjct: 1 MGTPDFAVDILQKLIQEPFVNLKLVVTQPDKPVG-RKQILTAPAVKEFAQKVGIEVVQPE 59
Query: 67 KLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
KL E D VVVAYG ++P+ +L K G N HASLLP +RGAAPIQR
Sbjct: 60 KLKNNEDFLDLLKKIEPDTIVVVAYGKILPKEVLEIPKHGCINVHASLLPEYRGAAPIQR 119
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
+M G TGI IMKMD+ LDTG + ++V I +N + L ++L+ + + ++E +
Sbjct: 120 VLMDGKEYTGITIMKMDEGLDTGDILLQKEVKIENNDDILTLSKKLAEVGSQLLIETLRN 179
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
+E Q + TYA I K E ++++ SA+ ++N RAL +PG +
Sbjct: 180 IESI--TPVKQDHSRATYAPPIKKEEGKIDWNMSAKEIYNRFRALKIWPGIFTTFKG--- 234
Query: 245 HERIKLLESQLVEGE----------GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +K+ + ++ + G E+ + + I G +R+ LQ GG+ +
Sbjct: 235 -KLLKIHDIEIAQDNKDNINSNVLNGTVVEIDDSSIIIKVRDGLIRLRLLQLEGGKKISA 293
Query: 295 GDFLLGCPVIIGCIV 309
DF+ G + G ++
Sbjct: 294 RDFVNGYKIKKGDVL 308
>gi|220912432|ref|YP_002487741.1| methionyl-tRNA formyltransferase [Arthrobacter chlorophenolicus A6]
gi|254789333|sp|B8HH63|FMT_ARTCA RecName: Full=Methionyl-tRNA formyltransferase
gi|219859310|gb|ACL39652.1| methionyl-tRNA formyltransferase [Arthrobacter chlorophenolicus A6]
Length = 306
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 89/309 (28%), Positives = 145/309 (46%), Gaps = 6/309 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT AV +L ALV + +V+V T+P P G R S V +A E L
Sbjct: 1 MRVLFAGTPAVAVPSLDALVEAGFDVVAVLTRPDAPIG-RKRVLTPSPVAARAAELGLDV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ K+ EQ + DVA +VAYG ++P L + G+ N H SLLP WRGAAP+
Sbjct: 60 IYAAKVDDAAIEQISAAAPDVAAIVAYGGLVPPAALAIPRHGWINLHFSLLPAWRGAAPV 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QR++MAGD+ TG +++K LDTGPV + + L + LS A + + +
Sbjct: 120 QRSVMAGDDVTGAVTFQLEKGLDTGPVFGTLTEAVGPEDTSGQLLERLSHSGAVLLAQTL 179
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+E PQ + + + + +N+ A + R +P PGAW ++
Sbjct: 180 SAIETGKASAVPQAGDVSLAPKL-TLEDGHLNWHHPALAIGRQARGATPEPGAWT--LLD 236
Query: 243 NKHERIKLLESQLVEGEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ ++ + + + PG + + AV + R+Q AG +++ D+ G
Sbjct: 237 GQRVKLDPVRLRPDVEDLAPGALAFHGKSVLVGTGSHAVELTRIQPAGKKMMAAPDWARG 296
Query: 301 CPVIIGCIV 309
+ G +
Sbjct: 297 IGSLEGVVF 305
>gi|329767016|ref|ZP_08258544.1| methionyl-tRNA formyltransferase [Gemella haemolysans M341]
gi|328837741|gb|EGF87366.1| methionyl-tRNA formyltransferase [Gemella haemolysans M341]
Length = 320
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 95/320 (29%), Positives = 157/320 (49%), Gaps = 17/320 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++VFMGT +FAV L+ L+ + + + V TQP + G R V A + ++
Sbjct: 3 KKKIVFMGTPKFAVPVLEMLIEN-YGVDLVITQPDKKVG-RKKVLTPPPVKVVALDNNIK 60
Query: 62 ALVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ +E N D+ + AYG ++P++IL K N H SLLP+ RG
Sbjct: 61 VLQPEKISTDEETYNTLKELNPDIIITAAYGQLVPEKILEIPKHKCINVHGSLLPKLRGG 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ +I+ +TGI IM M K LD G + +V I + N L +LSV +
Sbjct: 121 APIQYSILEDHKKTGITIMYMVKKLDAGDMISKVEVDILDSDNYESLHDKLSVAGRDLLN 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + K+ ++ Q + T+A I + + ++++ SA V N +RAL P PGA+ +
Sbjct: 181 ETLPKIFSGDIAPEKQDDEQATFARNILREDEKIDWNTSAREVFNKVRALDPTPGAFTYL 240
Query: 240 MIGNKHERIKLLESQLVEGE-----GKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGR 290
+K+ S++VE E K G ++ N + C + +++ LQ +G +
Sbjct: 241 DGN----VLKIWSSEVVELEEQSSYSKVGTIVKQDKKNIYVLCGNETILKVHELQVSGKK 296
Query: 291 VLDIGDFLLGCPVIIGCIVG 310
+ + +FL +G I+G
Sbjct: 297 RMPVVNFLSNKKDYVGTILG 316
>gi|42519412|ref|NP_965342.1| methionyl-tRNA formyltransferase [Lactobacillus johnsonii NCC 533]
gi|73919399|sp|Q74IM9|FMT_LACJO RecName: Full=Methionyl-tRNA formyltransferase
gi|41583700|gb|AAS09308.1| methionyl-tRNA formyltransferase [Lactobacillus johnsonii NCC 533]
Length = 314
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 94/313 (30%), Positives = 164/313 (52%), Gaps = 13/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT F LQ L+ + I +V TQP + G R SAV + A + +LP
Sbjct: 4 VIFLGTPNFGSVVLQGLIEQGYEIKAVVTQPDKRVG-RKQVVHQSAVKETALKHNLPVYQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G EE + + D + AYG +P + L + K+ N H SLLP++RG APIQ
Sbjct: 63 PAKLSGSEELAELMKIEPDFIITAAYGQFLPTKFLKSAKVAPVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETG+ IM+M K +D G + + +PI+ + L +LS+L ++E +
Sbjct: 123 YSVLNGDKETGVTIMEMVKKMDAGDIFAQKALPITDEDTSGTLFDKLSILGRDLLLETLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K + + Q E+ + ++ ISK + ++N +A+ +N IRAL+P PGA+ +
Sbjct: 183 KFIDGTVTRTAQDEDKVVFSPNISKDQEKINLSMTAKEANNLIRALNPDPGAYFMLGG-- 240
Query: 244 KHERIKLLESQLV--EGEGKPGEVI--NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFL 298
+R K+ +++ + + G ++ F I+ + G+ + ++ +Q G + ++I D+L
Sbjct: 241 --KRFKVWKAKPLTEKTSFPAGTLVTNKKKFVISMADGSQLELLEVQPTGKKKMNIKDYL 298
Query: 299 L--GCPVIIGCIV 309
G IG +
Sbjct: 299 NGQGSHFTIGDKI 311
>gi|194334375|ref|YP_002016235.1| methionyl-tRNA formyltransferase [Prosthecochloris aestuarii DSM
271]
gi|229487507|sp|B4S9B8|FMT_PROA2 RecName: Full=Methionyl-tRNA formyltransferase
gi|194312193|gb|ACF46588.1| methionyl-tRNA formyltransferase [Prosthecochloris aestuarii DSM
271]
Length = 317
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 82/312 (26%), Positives = 151/312 (48%), Gaps = 16/312 (5%)
Query: 3 LRVVFMGTSEFAVATLQAL--VSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+R++FMGT +FAV +L+A+ + + V T +P + + + V K A+E +
Sbjct: 1 MRIIFMGTPDFAVPSLKAIAAMDGDFEVQLVVTGKDKPRRSKRSEPEPTPVKKAARELGI 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + E + ++ +VVA ++P + +LG +N HAS+LPR+RGAA
Sbjct: 61 PVMEVDDVKDERFVDTVARYRPDVLVVAAFRILPPAVYEQARLGAFNLHASILPRYRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ AI+ G+ E+G+ + K +DTG + K P+ N L L+ + A A+V+
Sbjct: 121 PVNWAIINGERESGVTTFFLRKSVDTGNMILQEKTPVYPEENAGELAARLAEIGAGAVVK 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ + + Q + T A K+S TR+++ + + + + IR L+P P AW
Sbjct: 181 TLELIRDGRVEPLLQNDTLATRAPKLSTENTRIDWVQPVDALCDFIRGLAPRPAAWAIF- 239
Query: 241 IGNKHERIKLLESQLV--------EGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGR 290
H+++K+ ++ + E PG + N + G + I+ LQ G +
Sbjct: 240 ---NHKKVKIFKASVADFHQPEAEEQSAIPGRIAVENNRLFVMGLDGWIEILSLQMEGKK 296
Query: 291 VLDIGDFLLGCP 302
V+ +F G
Sbjct: 297 VMQSHEFCCGFR 308
>gi|284991543|ref|YP_003410097.1| methionyl-tRNA formyltransferase [Geodermatophilus obscurus DSM
43160]
gi|284064788|gb|ADB75726.1| methionyl-tRNA formyltransferase [Geodermatophilus obscurus DSM
43160]
Length = 309
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 103/308 (33%), Positives = 159/308 (51%), Gaps = 10/308 (3%)
Query: 7 FMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
F GT E AV +L+ L++S H +V+V T+P +G RG K S V ++A +PAL P
Sbjct: 2 FAGTPEVAVPSLELLLASDHEVVAVLTRPDARSG-RGRKVSRSPVAERADAAGVPALQPR 60
Query: 67 KLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
+ E+ + L+ D A VVAYG ++PQ L+ + G+ N H SLLP WRGAAP+Q A
Sbjct: 61 SPREPEFLERLAELAVDSAPVVAYGALVPQAALDLPRYGWVNLHFSLLPAWRGAAPVQHA 120
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
IMAGD TG + +++ LDTGPV + PI+ L L++ A ++ +D +
Sbjct: 121 IMAGDEVTGASTFRLEAGLDTGPVYGVVTEPIAPRDTAGDLLGRLAISGARLLLATLDGI 180
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKH 245
+ L PQ G++ A +I + RV++ + V +R ++P PG W +
Sbjct: 181 QAGTLEPEPQPVEGVSLAPRIDPADARVDWSLPSHVVDRRVRGVTPAPGGWTT----WRG 236
Query: 246 ERIKLLESQLVEGE--GKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+R++L + + PGEV + +GAVR+ +Q AG R+L D+ G
Sbjct: 237 DRLRLGPVEPLSTSLGLAPGEVSVGPTGVLVGTGRGAVRLGEVQPAGKRLLPAPDWARGA 296
Query: 302 PVIIGCIV 309
G
Sbjct: 297 RPAPGERF 304
>gi|148544396|ref|YP_001271766.1| methionyl-tRNA formyltransferase [Lactobacillus reuteri DSM 20016]
gi|184153760|ref|YP_001842101.1| methionyl-tRNA formyltransferase [Lactobacillus reuteri JCM 1112]
gi|325682716|ref|ZP_08162232.1| methionyl-tRNA formyltransferase [Lactobacillus reuteri MM4-1A]
gi|148531430|gb|ABQ83429.1| methionyl-tRNA formyltransferase [Lactobacillus reuteri DSM 20016]
gi|183225104|dbj|BAG25621.1| methionyl-tRNA formyltransferase [Lactobacillus reuteri JCM 1112]
gi|324977066|gb|EGC14017.1| methionyl-tRNA formyltransferase [Lactobacillus reuteri MM4-1A]
Length = 317
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 96/315 (30%), Positives = 164/315 (52%), Gaps = 14/315 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M+ VVFMGT EFAV LQ+L+ + + + +V TQP G R S V + A++++
Sbjct: 1 MSTSVVFMGTPEFAVPILQSLIDNPEYDVQAVLTQPDHHIG-RKRTLHQSPVKELAEQYN 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ L P K E E+ +S D+ + AYG +P ++L A K+ N H SLLP++RG
Sbjct: 60 IEVLQPAKLSKSPEMEKIISLQPDLMITAAYGQFLPTKLLAAAKIAAINVHGSLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
APIQ +I+ GD ETG++IM M K +D G + R +PI ++ + ++LS+L +
Sbjct: 120 GAPIQYSIINGDKETGVSIMYMVKKMDAGDIISQRSIPIEDTDDSGTMFKKLSLLGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+E + KL ++ Q + + ++ I+ + +++F A + +R L P P +
Sbjct: 180 LETLPKLISGDVNPVAQDPDNVVFSPNITSEQEQIDFRLPAHLIDAKVRGLRPAPLGNMV 239
Query: 239 MMIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVL 292
+ R K+ + +E + +PG+V+ IA G +I +L+ AG + +
Sbjct: 240 I----DGLRTKIYDVTPLEEKTDLEPGKVVRVTKHQLVIAAGDGTTYQINKLKPAGKKAM 295
Query: 293 DIGDFLLGCP-VIIG 306
DI +L G + G
Sbjct: 296 DITSYLNGHKDITEG 310
>gi|269956514|ref|YP_003326303.1| methionyl-tRNA formyltransferase [Xylanimonas cellulosilytica DSM
15894]
gi|269305195|gb|ACZ30745.1| methionyl-tRNA formyltransferase [Xylanimonas cellulosilytica DSM
15894]
Length = 318
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 98/316 (31%), Positives = 151/316 (47%), Gaps = 12/316 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT AV +L+AL++S H +V+V T+ PAG RG V S V A+ +P
Sbjct: 1 MRLLFAGTPHAAVPSLEALIASRHDVVAVLTRADAPAG-RGRTLVPSPVRVAAEAAGIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ G + + D A VVAYG ++ +L + G+ N H SLLP WRGAAP+
Sbjct: 60 VTDVPRGDDFLTLLRDLDIDAAPVVAYGHLLRPDVLAVPRHGWVNLHFSLLPAWRGAAPV 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI+AGD TG +D+ +DTGPV I + L L+ A +V +
Sbjct: 120 QRAIIAGDEITGATTFLLDEGMDTGPVLGTMTETIRPRDTSGDLLDRLAHAGAGLLVATL 179
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D LE L PQ +G++ A K++ + ++F A V IR +P PGAW +
Sbjct: 180 DGLEDGALHPQPQPADGVSLAAKLTTADAHIDFRDPALAVDRLIRGCTPAPGAWTTVPGP 239
Query: 243 NKHERIKLLE--------SQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ L + L GE +PG + + AV++ +Q G + +
Sbjct: 240 DGAPARLGLGPVAARPDVTDLGAGELRPG---KREVLVGTATHAVQLGLVQPVGKKPMAA 296
Query: 295 GDFLLGCPVIIGCIVG 310
D+ G + ++G
Sbjct: 297 ADWARGARLGDDVLLG 312
>gi|208779190|ref|ZP_03246536.1| methionyl-tRNA formyltransferase [Francisella novicida FTG]
gi|208744990|gb|EDZ91288.1| methionyl-tRNA formyltransferase [Francisella novicida FTG]
Length = 313
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 115/319 (36%), Positives = 168/319 (52%), Gaps = 18/319 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L ++F GT + + L+ L S H+I +V TQP R G RG + S V + A P
Sbjct: 3 KLNIIFAGTPDISAQVLKDLYKSQHNIQAVLTQPDRAKG-RGKRVQFSPVKEVALANHTP 61
Query: 62 ALVP--TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K E EQ DV VV+AYG+++PQ L+ + G N H SLLP+WRGA
Sbjct: 62 VFQPLSFKKNPEVLEQIKQLKPDVIVVIAYGIIVPQEFLDIARYGCLNIHVSLLPKWRGA 121
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAI AGD +TGI IM+MD LDTG + ++ I + L + + L ++
Sbjct: 122 APIQRAIQAGDTKTGICIMQMDAGLDTGDILNTLEIEIQETDTSQTLHDKFAKLSIKPLL 181
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E ++K+E + PQ +YA KI+K E ++F +SA + HIRA +P+PGA+ +
Sbjct: 182 ETLEKIE--IIKPEPQQGE-PSYAHKITKQEGLIDFTKSAWQISCHIRAFTPWPGAYFIL 238
Query: 240 MIGNKHERIKLLESQLV---EGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLD 293
E IK+ E +++ K G +I+ F IA S +R +LQ ++L+
Sbjct: 239 DD----EAIKVGEFEILYQNTDNRKAGTIIDIDRSGFDIATSDKIIRFRQLQFPNKKMLN 294
Query: 294 IGDFLLGCPVI--IGCIVG 310
I D L G + IG +G
Sbjct: 295 IVDILNGKDLDKYIGYKLG 313
>gi|294648677|ref|ZP_06726139.1| methionyl-tRNA formyltransferase [Acinetobacter haemolyticus ATCC
19194]
gi|292825467|gb|EFF84208.1| methionyl-tRNA formyltransferase [Acinetobacter haemolyticus ATCC
19194]
Length = 320
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 113/320 (35%), Positives = 168/320 (52%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL+ SSH I++VYTQP R AG RG K S V + A E LP
Sbjct: 1 MKIIFAGTPEFAATALAALLKSSHQIIAVYTQPDRKAG-RGQKLTPSPVKQLALEHGLPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + DV VV AYGL++PQ +L+ G N H SLLPRW
Sbjct: 60 YQPLHFKASTEEGLAARQELAALGADVMVVAAYGLILPQSVLDTPTYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPIQRAI GD ETGI IM+M LDTG + + PI++ +A L +L++ A
Sbjct: 120 RGAAPIQRAIATGDAETGITIMQMAAGLDTGDMMYKTYCPITAEDTSASLHDKLAIQGAE 179
Query: 177 AMVEAMDKLEQ---NNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ ++ + Q E YA K+ K E R+++ ++A + +IRA +P+P
Sbjct: 180 AICTLLESEQSLKAFIEKREVQDEALTVYAHKLVKAEARIDWSQNAVQIDRNIRAFNPWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGG 289
A++++ N + SQ + + + GE++ +AC + AV + LQ GG
Sbjct: 240 VAFIQLDENNALRVWGSILSQHSKADAQVGEIVAMDKHGVHVACGENSAVCLTSLQWPGG 299
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ L+ + + +G I+
Sbjct: 300 KALNPIQMIQTQKLHLGQIL 319
>gi|302872124|ref|YP_003840760.1| methionyl-tRNA formyltransferase [Caldicellulosiruptor obsidiansis
OB47]
gi|302574983|gb|ADL42774.1| methionyl-tRNA formyltransferase [Caldicellulosiruptor obsidiansis
OB47]
Length = 306
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 17/312 (5%)
Query: 8 MGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MGT +FAV LQ L+ ++ V TQP +P G R AV + AQ+ + + P
Sbjct: 1 MGTPDFAVDILQKLIQEPFVNLKLVVTQPDKPVG-RKRILTAPAVKEFAQKIGIEVVQPE 59
Query: 67 KLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
KL E N D VVVAYG ++P+ +L K G N HASLLP +RGAAPIQR
Sbjct: 60 KLKNNEEFFELLKEINPDTIVVVAYGKILPKEVLEIPKHGCINVHASLLPEYRGAAPIQR 119
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
A+M G TGI IMKMD+ LDTG + ++V I ++ + L ++L+ + +VE +
Sbjct: 120 ALMDGKEYTGITIMKMDEGLDTGDILLQKEVEIENDDDILTLSKKLAEVGGKLLVETLKN 179
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
+E Q + TYA I K E ++++ A+ ++N RAL +PG +
Sbjct: 180 IENI--TPVKQDHSRATYAPPIKKEEGKIDWDMCAKEIYNRFRALKIWPGIFTTFKE--- 234
Query: 245 HERIKLLESQLVE-------GEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +K+ + ++ + G E+ + + I G +R+ LQ GG+ + DF
Sbjct: 235 -KLLKIHDMEIAQYNINSNVPNGTVVEIDDSSIIIKVRDGLIRLKLLQLEGGKKIGARDF 293
Query: 298 LLGCPVIIGCIV 309
+ G + G ++
Sbjct: 294 VNGYKIKRGDVL 305
>gi|134093409|ref|YP_001098484.1| methionyl-tRNA formyltransferase [Herminiimonas arsenicoxydans]
gi|166214901|sp|A4G1G8|FMT_HERAR RecName: Full=Methionyl-tRNA formyltransferase
gi|133737312|emb|CAL60355.1| Methionyl-tRNA formyltransferase [Herminiimonas arsenicoxydans]
Length = 317
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 126/318 (39%), Positives = 179/318 (56%), Gaps = 20/318 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL ++ I V TQP RPAG RG++ SAV + A +P
Sbjct: 1 MKIIFAGTPEFAAVALAALHAAGFEIPLVLTQPDRPAG-RGMQLQASAVKQFALAHKIPV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ QE ++ + DV VV AYGL++PQ +L+ LG N HASLL
Sbjct: 60 AQPISLRLDGKYPDVAQEAHDLLRATPHDVMVVAAYGLILPQSVLDIPPLGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RAI GD +TGI IM+M+ LDTGP+ M +PI+++ TA L +L+ L
Sbjct: 120 PRWRGAAPIHRAIEVGDEKTGITIMQMELGLDTGPMLLMESLPIAADDTTASLHDKLARL 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+VEA+ KLE+ L +PQ E G YA KI+K E ++ +SA+ + IRA +PFP
Sbjct: 180 GGEMIVEALLKLEKGELTATPQPEAGANYAAKIAKEEATLDLRQSAQELARKIRAFNPFP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGK--PGEVIN----PNFTIACSQGAVRIMRLQRA 287
GA M +K ++Q +E + G+VI+ IAC GA+R+ LQ+
Sbjct: 240 GA----MGICNGTPVKFWQAQALECSNQWPAGQVISANAQDGVVIACGDGALRVTELQKP 295
Query: 288 GGRVLDIGDFLLGCPVII 305
GG+ L +F+ G +
Sbjct: 296 GGKRLPAAEFIKGFALEA 313
>gi|223038677|ref|ZP_03608970.1| methionyl-tRNA formyltransferase [Campylobacter rectus RM3267]
gi|222880079|gb|EEF15167.1| methionyl-tRNA formyltransferase [Campylobacter rectus RM3267]
Length = 307
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 95/319 (29%), Positives = 148/319 (46%), Gaps = 23/319 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF-- 58
M +VFMGT E+A L+AL + I +V+TQP +P G R S V AQ++
Sbjct: 1 MK-NIVFMGTPEYAAKILRALAEAKFKIAAVFTQPDKPVG-RKQILTPSEVKVYAQQYLP 58
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
++P P L E + +VVA I + + N HAS+LP++RG
Sbjct: 59 AVPIFQPATLKDEAVTAQIKELKPDFIVVAAYGKILPQAV-LDIAPCINLHASILPKYRG 117
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+PIQ AI+AG+ +TG+ M MD LDTG + P + + +
Sbjct: 118 ASPIQSAILAGEKQTGVTAMLMDTGLDTGDMLDFAYTPCEDKTAAQLFDELGDLAGELIV 177
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
NL Q T+ +KISK + +F A ++N RAL+P+PG +L
Sbjct: 178 RVL---RNFANLTPLKQEGAQATHCKKISKSDGLFSFEEGARQIYNKFRALTPWPGIYLA 234
Query: 239 MMIGNKHERIKLLESQLV--------EGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGR 290
+ K+LE +L+ E G+ V F ++C +GAV+I+++Q G +
Sbjct: 235 SGL-------KILELELLRESCGRKFERTGEILHVDKLGFCVSCGEGAVKIIKVQEPGKK 287
Query: 291 VLDIGDFLLGCPVIIGCIV 309
+D +L G + G I+
Sbjct: 288 PVDASAYLNGKRLNAGDIL 306
>gi|194466506|ref|ZP_03072493.1| methionyl-tRNA formyltransferase [Lactobacillus reuteri 100-23]
gi|194453542|gb|EDX42439.1| methionyl-tRNA formyltransferase [Lactobacillus reuteri 100-23]
Length = 317
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 96/315 (30%), Positives = 164/315 (52%), Gaps = 14/315 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M+ VVFMGT EFAV LQ+L+ + + + +V TQP G R S V + A++++
Sbjct: 1 MSTSVVFMGTPEFAVPILQSLIDNPEYDVQAVLTQPDHHIG-RKRTLHQSPVKELAEQYN 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ L P K E E+ +S D+ + AYG +P ++L A K+ N H SLLP++RG
Sbjct: 60 IEVLQPAKLSKSPEMEKIISLQPDLMITAAYGQFLPTKLLAAAKIAAINVHGSLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
APIQ +I+ GD ETG++IM M K +D G + R +PI ++ + ++LS+L +
Sbjct: 120 GAPIQYSIINGDKETGVSIMYMVKKMDAGDIISQRSIPIEDTDDSGTMFKKLSLLGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+E + KL ++ Q + + ++ I+ + +++F A + +R L P P +
Sbjct: 180 LETLPKLISGDVNPVAQDPDKVVFSPNITSEQEQIDFRLPAHLIDAKVRGLRPAPLGNMV 239
Query: 239 MMIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVL 292
+ R K+ + +E + +PG+V+ IA G +I +L+ AG + +
Sbjct: 240 I----DGLRTKIYDVTPLEEKTDLEPGKVVRVTKHQLVIAAGDGTTYQINKLKPAGKKAM 295
Query: 293 DIGDFLLGCP-VIIG 306
DI +L G + G
Sbjct: 296 DITSYLNGHKDITEG 310
>gi|227833012|ref|YP_002834719.1| Methionyl-tRNA formyltransferase [Corynebacterium aurimucosum ATCC
700975]
gi|262182500|ref|ZP_06041921.1| methionyl-tRNA formyltransferase [Corynebacterium aurimucosum ATCC
700975]
gi|254789349|sp|C3PG27|FMT_CORA7 RecName: Full=Methionyl-tRNA formyltransferase
gi|227454028|gb|ACP32781.1| Methionyl-tRNA formyltransferase [Corynebacterium aurimucosum ATCC
700975]
Length = 332
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 100/319 (31%), Positives = 149/319 (46%), Gaps = 27/319 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E AV LQ L+ S H + +V T+P G RG S V A+E +
Sbjct: 1 MRIIFAGTPEPAVVALQKLIESHHEVAAVITRPDARRG-RGRSLHPSPVKALAEEHGIEV 59
Query: 63 LVPTKLGQEEYEQF------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
L PT L Q + + VVAYG +I + +L+ K G+ N H SLLP W
Sbjct: 60 LTPTTLKQGTEDGDALRARLAEIAPEAIPVVAYGNLITEDLLSLPKHGWVNLHFSLLPTW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAP+Q AI AGD TG ++D+ LDTG + + I L L+
Sbjct: 120 RGAAPVQAAIAAGDERTGATTFRIDQGLDTGDILATMEETIRPTDTADDLLTRLAYAGGD 179
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+VE M+ LE ++ PQ TYA KI+ + R+++ + + HIRA +P PGAW
Sbjct: 180 LLVETMNGLEDGSIIPQPQEGE-ATYAHKIATEDARIDWTAKVDVIDRHIRAHTPGPGAW 238
Query: 237 LEMMIGNKHERIKLLESQLVE-------------GEGKPGEVI--NPNFTIACSQGAVRI 281
+ R+K+ +VE +PGEV + VR+
Sbjct: 239 TLLGES----RLKVGPVSVVEPAELGELSDTTALTSLQPGEVHVAKKEVMVGTGSTPVRL 294
Query: 282 MRLQRAGGRVLDIGDFLLG 300
++Q G ++++ D+ G
Sbjct: 295 GQIQPPGKKMMNAADWGRG 313
>gi|227544380|ref|ZP_03974429.1| methionyl-tRNA formyltransferase [Lactobacillus reuteri CF48-3A]
gi|300909759|ref|ZP_07127220.1| methionyl-tRNA formyltransferase [Lactobacillus reuteri SD2112]
gi|227185643|gb|EEI65714.1| methionyl-tRNA formyltransferase [Lactobacillus reuteri CF48-3A]
gi|300893624|gb|EFK86983.1| methionyl-tRNA formyltransferase [Lactobacillus reuteri SD2112]
Length = 317
Score = 149 bits (375), Expect = 7e-34, Method: Composition-based stats.
Identities = 95/315 (30%), Positives = 163/315 (51%), Gaps = 14/315 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M+ VVFMGT EFAV LQ+L+ + + I +V TQP G R S V + A++++
Sbjct: 1 MSTSVVFMGTPEFAVPILQSLIDNPEYDIQAVLTQPDHHIG-RKRTLHQSPVKELAEQYN 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ L P K E E+ ++ D+ + AYG +P ++L A K+ N H SLLP++RG
Sbjct: 60 IEVLQPAKLSKSPEMEKIINLQPDLMITAAYGQFLPTKLLAAAKIAAINVHGSLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
APIQ +I+ D ETG++IM M K +D G + R +PI ++ + ++LS+L +
Sbjct: 120 GAPIQYSIINDDKETGVSIMYMVKKMDAGDIISQRSIPIEDTDDSGTMFKKLSLLGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+E + KL ++ Q + + ++ I+ + +++F A + +R L P P +
Sbjct: 180 LETLPKLISGDVNPVAQDPDKVVFSPNITSEQEQIDFRLPARLIDAKVRGLRPAPLGNMI 239
Query: 239 MMIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVL 292
+ R K+ + +E + +PG+V+ IA G +I +L+ AG + +
Sbjct: 240 I----DGLRTKIYDVTPLEEKTDLEPGKVVRVTKHQLVIAAGDGTTYQINKLKPAGKKAM 295
Query: 293 DIGDFLLGCP-VIIG 306
DI +L G + G
Sbjct: 296 DITSYLNGHKDITEG 310
>gi|182414657|ref|YP_001819723.1| methionyl-tRNA formyltransferase [Opitutus terrae PB90-1]
gi|177841871|gb|ACB76123.1| methionyl-tRNA formyltransferase [Opitutus terrae PB90-1]
Length = 337
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 98/317 (30%), Positives = 163/317 (51%), Gaps = 10/317 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS---HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
LR+VF+G+ A+ L+ L IV V+TQP R AG RG K +A+ A
Sbjct: 3 PLRIVFLGSDPIALPLLEWLAGEGRAIGEIVVVFTQPDRAAG-RGQKITPNAIKTWALAR 61
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P K+ E Q F DV++V+AYG ++ ++ +LG N H S+LP++RG
Sbjct: 62 GIPVLQPEKVTDEVRTQLAGFAPDVSLVMAYGHILRDEFISTPRLGTLNLHTSILPKYRG 121
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+PIQ A+ +GD +TG+ +M+M + LD GP+ + +V I + ++ +L+ C +
Sbjct: 122 ASPIQTAVASGDRQTGVTLMRMVRKLDAGPIGDVERVAIELDDTALDVEAKLAAACVPLL 181
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
A+ +L L + Q ++ +Y K++K + ++F SA+ + I L P+P +E
Sbjct: 182 QRALPRLRDGTLAFAAQDDSAASYCRKLAKEDGVLDFAMSADVLAARINGLFPWPACSVE 241
Query: 239 MMIGNKHERIKLLESQLVEGEG---KPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVL 292
+ G PGEV+ I+ +GA+ + R+QR GGR+L
Sbjct: 242 IARQPVKFGAATARDLPPSAVGRGKPPGEVLGADTEGLLISTGEGALCVRRMQRPGGRML 301
Query: 293 DIGDFLLGCPVIIGCIV 309
+FL G P+ +G +
Sbjct: 302 PTAEFLRGFPIAVGMRL 318
>gi|291300070|ref|YP_003511348.1| methionyl-tRNA formyltransferase [Stackebrandtia nassauensis DSM
44728]
gi|290569290|gb|ADD42255.1| methionyl-tRNA formyltransferase [Stackebrandtia nassauensis DSM
44728]
Length = 308
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 94/303 (31%), Positives = 148/303 (48%), Gaps = 6/303 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT E AV +LQA+ S H +++V T+P P+G RG K S + A +
Sbjct: 1 MRLVFAGTPEVAVPSLQAIADSGHELLAVVTRPDAPSG-RGRKLHRSPAGEWADANGVEV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K + E++ L+ D VVAYG ++PQ L+ + G+ N H SLLP WRGAAP
Sbjct: 60 LTPAKPREPEFQHRLAELAPDCVPVVAYGALVPQSALDIPRHGWINLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A++ GD TG + +++ LDTGP+ I ++ + L L+ A + +
Sbjct: 120 VQHAVLHGDEVTGACVFQLEAGLDTGPIYGSLTETIGAHDTSGDLLTRLADSGAQLLRDV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D +E PQ E+GI+ A K+S + R+ + A V +RA++P PGAW
Sbjct: 180 LDSIESGQARAVPQPEHGISMAPKVSVDDARIRWDDPAFAVDRRVRAVTPAPGAWTTW-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ R+ + PG V + VR+ +Q G + + +
Sbjct: 238 DGQRVRLGPVTPDPQGPALLPGAVAVSKSTVHVGTGTDPVRLGEIQPPGKKRMAADAWGR 297
Query: 300 GCP 302
G
Sbjct: 298 GLH 300
>gi|258511304|ref|YP_003184738.1| methionyl-tRNA formyltransferase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478030|gb|ACV58349.1| methionyl-tRNA formyltransferase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 314
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 114/306 (37%), Positives = 162/306 (52%), Gaps = 10/306 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT+R +F GT +FAV +L AL + +V V TQP RP G R + V +A E L
Sbjct: 1 MTVRALFCGTPDFAVPSLDALCRLGYEVV-VITQPDRPRG-RSRELAPPPVKIRALELGL 58
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L P +L + F DV V AYG ++ + +L+ ++G N HASLLPRWRGAA
Sbjct: 59 PVLQPERLRDAMDDIRR-FAPDVIVTAAYGKILSEALLSLPRVGSVNVHASLLPRWRGAA 117
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD ETGI +M+M + LD GP+ +V I L +L+ L
Sbjct: 118 PIQRAIWAGDAETGITLMEMVRDLDAGPILAQERVAIEPTDTAGTLHDKLAHLGGEVCER 177
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + L PQ E G+TYAEK+++ + +++ RSA + +RAL+P PGA +
Sbjct: 178 YLPRYVAGELAPVPQPEEGVTYAEKLTREDEWIDWTRSAAEIDRQVRALAPVPGATSALT 237
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
G E +K+L + +E G PGEV ++C G I ++ +G RV+ G
Sbjct: 238 TG---EELKILAGRPIETATFGDPGEVKPRGDALWVSCGGGVYEISEVKPSGRRVMPAGA 294
Query: 297 FLLGCP 302
F G
Sbjct: 295 FWRGLR 300
>gi|89898722|ref|YP_515832.1| methionyl-tRNA formyltransferase [Chlamydophila felis Fe/C-56]
gi|89332094|dbj|BAE81687.1| methionyl tRNA formyltransferase [Chlamydophila felis Fe/C-56]
Length = 335
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 104/308 (33%), Positives = 169/308 (54%), Gaps = 9/308 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+L+V++ GT +FA L L+ +++ V T+ +P +R + + S V A +LP
Sbjct: 16 SLKVIYFGTPQFAATVLADLLHHDVNVIGVVTRVDKPQ-KRSSQPIPSPVKTLALSKNLP 74
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K ++ + +F ADV VVVAYG ++ Q +L+ K G YN HA LLP +RGAA
Sbjct: 75 VLQPEKASDPQFIEQLRAFEADVFVVVAYGAILRQVVLDVPKYGCYNLHAGLLPAYRGAA 134
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR IM G ++G +++MD +DTG +A + VP+ ++ L + L+ +++
Sbjct: 135 PIQRCIMDGVTQSGNTVIRMDAGMDTGDIAGVSYVPVGPDMTAGELAEVLANQGGEILIK 194
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ + +PQ + + A K+SK E V + R A+ V+ IR ++P PGAW
Sbjct: 195 TLQQISNGTISHTPQDSSKASIAPKLSKEEGFVLWDRPADKVYAQIRGVTPAPGAWALYS 254
Query: 241 IGNKHE-RIKLLESQLVEGE---GKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLD 293
+K E R+ + ++ LV + G PG++I IACS+GAV + +Q G V+D
Sbjct: 255 YQDKPEKRLVIRKASLVADKRVYGNPGDIIVSGQQELLIACSEGAVCLKEIQPEGKGVMD 314
Query: 294 IGDFLLGC 301
FL G
Sbjct: 315 SKTFLNGH 322
>gi|311742367|ref|ZP_07716176.1| methionyl-tRNA formyltransferase [Aeromicrobium marinum DSM 15272]
gi|311313995|gb|EFQ83903.1| methionyl-tRNA formyltransferase [Aeromicrobium marinum DSM 15272]
Length = 307
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 94/302 (31%), Positives = 154/302 (50%), Gaps = 9/302 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT + AV L+ALV+S H +V+V T+P +G RG S V A+ +
Sbjct: 1 MRLVFAGTPDTAVPALEALVASRHEVVAVVTRPDARSG-RGRTVAPSPVAVAAEAHGIEV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + ++ + D VVAYG ++ + L+ G+ N H S+LP WRGAAP
Sbjct: 60 LKPLTPAEPDFHARLVELAPDCCPVVAYGAMLRRAALDVPTWGWVNLHFSVLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QR+IMAGD TG ++ + + LD GPV + I + L L+ + +V+A
Sbjct: 120 VQRSIMAGDEVTGASVFSIVEALDAGPVLGVITERIRPDDTAGTLLDRLAHEGSRLLVDA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
MD +E ++ PQ ++ ++YA K+S + RV++ RSA V IR +P PGAW +
Sbjct: 180 MDHIEAGDIAAHPQADDHVSYAPKLSTEDARVDWARSAFAVDRQIRGCTPSPGAWTVLGE 239
Query: 242 GNKHERIKLLESQLVEG-EGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
R+K+ + + + PG + + + + + +Q G R++ D+
Sbjct: 240 D----RVKIGPAVVSDDRTLPPGRIGVSKHEVRVGTTTTDLVLGDVQAVGKRLMPAADWA 295
Query: 299 LG 300
G
Sbjct: 296 RG 297
>gi|262202277|ref|YP_003273485.1| methionyl-tRNA formyltransferase [Gordonia bronchialis DSM 43247]
gi|262085624|gb|ACY21592.1| methionyl-tRNA formyltransferase [Gordonia bronchialis DSM 43247]
Length = 313
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 105/317 (33%), Positives = 157/317 (49%), Gaps = 15/317 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT + AVA+LQAL+ S H +V V T+P +G RG S V A E+ L
Sbjct: 1 MRIVFAGTPDVAVASLQALIDSPAHEVVGVITRPDAVSG-RGRTVSRSPVGLLADEYGLS 59
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P +L + + ++ D VVAYG ++P +L+ + G+ N H S+LP WRGAA
Sbjct: 60 VITPRRLAEPDVADTLRAWAPDCGAVVAYGGLVPPALLDLPEHGWINLHFSVLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG + +++K LDTGPV + I+ + L + LSV A +V
Sbjct: 120 PVQAAIAAGDEVTGASTFRLEKGLDTGPVYGVLTETIAPADTSGALLERLSVAGAGLLVR 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + L +PQ +GI++A KI + RV + A V IRA +P PGAW +
Sbjct: 180 TLDGIADGELTPTPQPPDGISHAPKIEVDDARVRWELPAHIVERLIRAYTPAPGAWTSLG 239
Query: 241 IGNKHERIKLLESQLVEGE------GKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVL 292
RIKL + + + PG V + VR+ Q G + +
Sbjct: 240 DN----RIKLGPVTVADDDPNAPDALDPGAVAVTKKAVYVGTGSVPVRLGTTQPPGKKPM 295
Query: 293 DIGDFLLGCPVIIGCIV 309
D+ G + G +
Sbjct: 296 PAADWARGARLSDGTTL 312
>gi|121610997|ref|YP_998804.1| methionyl-tRNA formyltransferase [Verminephrobacter eiseniae
EF01-2]
gi|166215596|sp|A1WQ79|FMT_VEREI RecName: Full=Methionyl-tRNA formyltransferase
gi|121555637|gb|ABM59786.1| methionyl-tRNA formyltransferase [Verminephrobacter eiseniae
EF01-2]
Length = 330
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 116/327 (35%), Positives = 163/327 (49%), Gaps = 20/327 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVF GT FA LQ L+ + S+ V T+P +PAG RGL+ S V + A L
Sbjct: 1 MKVVFAGTPGFARVALQRLLDAGFSLPLVLTRPDQPAG-RGLQWQASPVKQCALAHGLAV 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ L+ A+V VV AYGL++PQ +L+ G N HASLL
Sbjct: 60 AQPRSLRLDGRYPQDAAAARAALLAAQAEVMVVAAYGLILPQWVLDLPARGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPIQRAI AGD TG+ IM+MD LDTG + + I+ TA L L+ L
Sbjct: 120 PRWRGAAPIQRAIEAGDTHTGVTIMQMDAGLDTGAMLLSQGSAIAPTDTTATLHDRLAAL 179
Query: 174 CAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
A + +LP Q G+ YA KI K E+ +++ A+ + IRA P
Sbjct: 180 GADLIVQALEKMAAGADLPALAQPAQGVAYARKIEKSESSIDWSLPAQRIGQRIRAFDPA 239
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEGE-----GKPGEVI---NPNFTIACSQG-AVRIMR 283
PGA + ++ ++G+ PG+++ + +AC QG A+R+
Sbjct: 240 PGASTTCNGTSIKLWGYAIDGATIDGQRGVPRMHPGQILSADDSGIAVACGQGTALRLTV 299
Query: 284 LQRAGGRVLDIGDFLLGCPVIIGCIVG 310
LQRAGG+ L DFL G + G +G
Sbjct: 300 LQRAGGKRLAAADFLRGFALQPGMWLG 326
>gi|221194819|ref|ZP_03567876.1| methionyl-tRNA formyltransferase [Atopobium rimae ATCC 49626]
gi|221185723|gb|EEE18113.1| methionyl-tRNA formyltransferase [Atopobium rimae ATCC 49626]
Length = 305
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 93/300 (31%), Positives = 143/300 (47%), Gaps = 4/300 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV +L AL ++ H +V V T+P G RG + SAV A + LP
Sbjct: 1 MRIVFMGTPDFAVPSLTAL-AAKHEVVQVVTRPDAIRG-RGKIAEPSAVKIAAHDLGLPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ ++ + E+ ++ D+ VVVA+G +IP +L++ LG N HASLLPR RGAAPI
Sbjct: 59 IETARMTSDSIEKIVACAPDILVVVAFGCIIPDELLSSVPLGGINVHASLLPRLRGAAPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI+AGD TG++IM++ LD G I + + +
Sbjct: 119 QRAILAGDTLTGVSIMRVVHELDAGAWCRQSSCEIGTKTTAQLTSELAHLGARELSCALS 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D Q T+A KI+K E +++ A ++A S A +
Sbjct: 179 DIAAGTVC-WHEQDAEQATFAAKITKQEMKLDPHDGARQNVLRVQASSDTAPARARIAGR 237
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+ E++ E E E+ + + CS GA+ ++ L+ G R +D F G
Sbjct: 238 GVRVLL-AREAKEAEPEAFVVEIQKGHLYLGCSDGALEVLELRPDGKRAMDASAFAAGLH 296
>gi|309791251|ref|ZP_07685782.1| methionyl-tRNA formyltransferase [Oscillochloris trichoides DG6]
gi|308226677|gb|EFO80374.1| methionyl-tRNA formyltransferase [Oscillochloris trichoides DG6]
Length = 306
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 97/307 (31%), Positives = 153/307 (49%), Gaps = 13/307 (4%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MG+ FAV L+ALV++ H +V+V TQP RPAG R V AQ LP L P
Sbjct: 1 MGSPTFAVHPLEALVAAGHEVVAVVTQPDRPAG-RQRHLTAPPVKVAAQRLGLPILQPPT 59
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
E + DV VV AYG ++ +L LG+ N H SLLP RG AP+ AI
Sbjct: 60 LRDTAVVEALSALRPDVGVVAAYGEILRPNVLAIPPLGYLNIHPSLLPLHRGPAPVAGAI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+AGD +TG+ IM++D+ +D+GP+ + ++ + L EL V+ A +VEA+ +
Sbjct: 120 LAGDRQTGVTIMRLDRGMDSGPIVRQVRTDLAPDAYAGPLTDELFVVGAKLLVEALAEYA 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ Q + + K + V++ +SA + IRA P+PG + + +
Sbjct: 180 AGRIVPQAQEHERASLTRMLKKEDGLVDWSQSAIQIERMIRAYDPWPG----VQTSWRGQ 235
Query: 247 RIKLLESQLV---EGEGKPGEVINPN----FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
++LL + ++ + PG++I+ + +A GA+ + LQ AG R +D +L
Sbjct: 236 AVRLLRAAVLNVGDATATPGQLISQSGQRYPLVATGSGALELRELQPAGKRPMDGAAWLA 295
Query: 300 GCPVIIG 306
G G
Sbjct: 296 GLREREG 302
>gi|71066693|ref|YP_265420.1| methionyl-tRNA formyltransferase [Psychrobacter arcticus 273-4]
gi|71039678|gb|AAZ19986.1| methionyl-tRNA formyltransferase [Psychrobacter arcticus 273-4]
Length = 361
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 116/337 (34%), Positives = 167/337 (49%), Gaps = 35/337 (10%)
Query: 3 LRVVFMGTSEFAVATLQALVSS----SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
LRVVF GT EFA +L+ L++ + IV+VY+QP R AG RG K SAV + A
Sbjct: 25 LRVVFAGTPEFAAISLEVLINQQDALNIDIVAVYSQPDRKAG-RGQKFAESAVKQVALAH 83
Query: 59 SLPALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
++ P + F + DV +V AYGL++P +LN G N H SL
Sbjct: 84 NIAVEQPETFKKSSIEGMTARQTFQDYQPDVMIVAAYGLILPIGVLNTPTYGCLNIHGSL 143
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI+AGD ETGI IM+MDK LDTG + + + PI S+ A L +++
Sbjct: 144 LPRWRGAAPIHRAILAGDTETGITIMQMDKGLDTGDMLYKVRAPIESDDTAASLHDKMAE 203
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
L A A+ + L Q ++ YAEK+ K E +++ +SA + IR L+P+
Sbjct: 204 LGATAITTVLQDLAHYQAQAIAQDDSQANYAEKLVKTEGEIDWTQSATVIERQIRGLTPW 263
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEG----EGKPGEVINPN---FTIACSQGA------- 278
PGA+ + +R+K+L S V + G VI+ +AC +
Sbjct: 264 PGAYTFLAG----QRVKILASLPVNASQPTDQPAGTVISVGRKAVLVACGNDSNTDTGIE 319
Query: 279 ------VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ I +LQ AG + + G + G
Sbjct: 320 TPQASTLAITQLQFAGSKPVRAEQICHGNQLNDGDQF 356
>gi|320527313|ref|ZP_08028498.1| methionyl-tRNA formyltransferase [Solobacterium moorei F0204]
gi|320132337|gb|EFW24882.1| methionyl-tRNA formyltransferase [Solobacterium moorei F0204]
Length = 312
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 90/315 (28%), Positives = 157/315 (49%), Gaps = 10/315 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M +R++F GT+EFA LQ L+ ++IV+V +QP +P G R ++ H A ++
Sbjct: 1 MKQIRIIFFGTTEFASGILQTLIDEGYNIVAVVSQPDKPVG-RKHTIQMTPTHVLADQYQ 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P + P L + E L + ++ + AYG +P RIL + G N H SLLP++RG
Sbjct: 60 IPVIQPDFLKE-HVEDVLRYEPELILTCAYGQFVPVRILEYPRYGCINVHPSLLPKYRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API A+M G+ ETG+++++M K +D G + P+ + A L Q L VL +
Sbjct: 119 APIHHAVMGGETETGVSLIQMTKAMDAGDIYARVTTPLGKDETMAELNQRLLVLSKQLVK 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNF-CRSAENVHNHIRALSPFPGAWLE 238
+ ++ L PQ +N + I+K E +V F + + ++NHIR L +P +
Sbjct: 179 DNLEDYIAGKLVGEPQDDNKVILGLNITKEEEKVQFAVENVQTLYNHIRGLIDWPMPYG- 237
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++ K + + + + + +PGE++ N +A G + + LQ G +
Sbjct: 238 -VVDGKRIKFCKVRMRKEDHQARPGEILGFKNHAMEVASIGGIIEVYELQPEGKSRMTAD 296
Query: 296 DFLLGC-PVIIGCIV 309
+ G +IG +
Sbjct: 297 AYANGAGRNMIGKVF 311
>gi|117928485|ref|YP_873036.1| methionyl-tRNA formyltransferase [Acidothermus cellulolyticus 11B]
gi|166214866|sp|A0LUE0|FMT_ACIC1 RecName: Full=Methionyl-tRNA formyltransferase
gi|117648948|gb|ABK53050.1| methionyl-tRNA formyltransferase [Acidothermus cellulolyticus 11B]
Length = 324
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 103/328 (31%), Positives = 158/328 (48%), Gaps = 26/328 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT + A+ +L+ L+ SSH +V+V T+P PAG RG S V A++ LP
Sbjct: 1 MRLLFAGTPQTALPSLRLLLESSHEVVAVLTRPDAPAG-RGRTPRPSPVALAAEQAGLPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + E S NA++AVVVAYG ++P+ L + G+ N H S+LP WRGAAP
Sbjct: 60 LKPRRLADPETLAALRSLNAELAVVVAYGALVPEPALAIPRHGWVNLHFSILPSWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q AI+ GD TG +++ LDTGP+ PI + L L+ A +++
Sbjct: 120 VQHAILHGDEVTGATTFRLEPDLDTGPIYGTVTEPIRPDDTAGDLLNRLARTGARLLLDT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + L PQ G++YA KI+ + R+++ A +V IRA++P PGAW +
Sbjct: 180 VDGIAAGVLAPRPQPTEGVSYAPKITPADARISWSSPAFHVDRLIRAVTPEPGAWTTLAG 239
Query: 242 GNKHERIKLLESQLVEGEGKPG--------------------EVINPNFTIACSQGAVRI 281
RI L +L E + PG V + + V +
Sbjct: 240 R----RIVLGPVRLAEPQHAPGATDDGSLAPGEIRVLAPGEIRVERDRVLVGTATTPVIL 295
Query: 282 MRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+Q AG R + + G + G
Sbjct: 296 GTVQPAGRRAMPAEAWARGARLAPGARF 323
>gi|189184236|ref|YP_001938021.1| methionyl-tRNA formyltransferase [Orientia tsutsugamushi str.
Ikeda]
gi|189181007|dbj|BAG40787.1| methionyl-tRNA formyltransferase [Orientia tsutsugamushi str.
Ikeda]
Length = 302
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 101/308 (32%), Positives = 171/308 (55%), Gaps = 13/308 (4%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MG+ EFA+ L+ L S H++++V+T P+ R L S +HK A S+P P
Sbjct: 1 MGSPEFAIPALKELALSKHNVIAVFTSKPKKR-DRYLNIQRSPIHKLASALSIPVYTPDS 59
Query: 68 LGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
L + + ++ DV VV AYGL+IP+ IL K G N H S+LP++RGAAPIQR I
Sbjct: 60 LKTNDVQNLIATLDADVIVVAAYGLIIPKAILKMKKYGCINIHPSMLPKYRGAAPIQRTI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ G+ ET + I++MD+ +DTG + +K ++ NI + L + + + A +V+A++ +
Sbjct: 120 INGEKETAVCIIQMDQGVDTGDIILCQKFHLAKNICFSELHDQCAKVGAKLLVKAINYI- 178
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ LP PQ ++ +YA K+SK E+++N+ SA + IR ++P+PG + N
Sbjct: 179 -HTLPRIPQSQDRASYAHKLSKSESKINWYESAYTIDCKIRGMNPWPGTFFTYNNCNI-- 235
Query: 247 RIKLLESQLVEGEG--KPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
K+L++++V +PG V N +AC + + ++ LQ G + L FL G
Sbjct: 236 --KVLKAKIVNNSHNLQPGTVKIVNNNKLLVACQEHFLELLSLQLPGRKELSSSQFLCGY 293
Query: 302 PVIIGCIV 309
++ ++
Sbjct: 294 HILPDTVL 301
>gi|50365227|ref|YP_053652.1| methyonyl-tRNA formyltransferase [Mesoplasma florum L1]
gi|73919405|sp|Q6F155|FMT_MESFL RecName: Full=Methionyl-tRNA formyltransferase
gi|50363783|gb|AAT75768.1| methyonyl-tRNA formyltransferase [Mesoplasma florum L1]
Length = 313
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 100/316 (31%), Positives = 163/316 (51%), Gaps = 14/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
++V+F GT + L L + +V V +QP RP G R + + V + A + +L
Sbjct: 3 KIKVIFCGTPQIGADILTTLTEMENVEVVLVISQPDRPVG-RKKELKPTPVKEIALKNNL 61
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P K+ E YE+ +D V AYG +P +IL+ K+ N H SLLP++RG A
Sbjct: 62 KIIQPVKI-SEAYEEIAQIESDFIVTCAYGQFVPTKILDLPKIDSINVHGSLLPKYRGGA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI GD++TGI+IMKM K +D G + I +T + ++L+ L + E
Sbjct: 121 PIQYAIKNGDSKTGISIMKMVKKMDAGDYYIQESIDIEETDDTGIMFEKLAKLGQKMIKE 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ K+ N LP Q E+ +T+++ IS E ++N+ + NV NHIR+LSP+P A
Sbjct: 181 NLLKIYNNELPPIAQNEDEVTFSKNISTEEEKINWNDLSVNVWNHIRSLSPWPIAHTF-- 238
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
ER K+ + Q++ KPG ++N I G V+I+ +Q+ G ++++
Sbjct: 239 --KGEERYKIQKVQILNNNVEAKPGTIVNISENGIDIQTKDGQVQILLIQKPGKKMMEAS 296
Query: 296 DF-LLGCP-VIIGCIV 309
+ L + +G
Sbjct: 297 SYKLNNLSDLKVGDCF 312
>gi|329667063|gb|AEB93011.1| methionyl-tRNA formyltransferase [Lactobacillus johnsonii DPC 6026]
Length = 314
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 94/313 (30%), Positives = 164/313 (52%), Gaps = 13/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT F LQ L+ + I +V TQP + G R SAV + A + +LP
Sbjct: 4 VIFLGTPNFGSVVLQGLIEQGYEIKAVVTQPDKRIG-RKQVVHQSAVKETALKHNLPVYQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G EE + + D + AYG +P + L + K+ N H SLLP++RG APIQ
Sbjct: 63 PAKLSGSEELAELMKIEPDFIITAAYGQFLPTKFLKSAKVAPVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETG+ IM+M K +D G + + +PI+ + L +LS+L ++E +
Sbjct: 123 YSVLNGDKETGVTIMEMVKKMDAGDIFAQKALPITDEDTSGTLFDKLSILGRDLLLETLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K + + Q E+ + ++ ISK + ++N +A+ +N IRAL+P PGA+ +
Sbjct: 183 KFIDGTVTRTAQDEDKVVFSPNISKDQEKINLSMTAKEANNLIRALNPDPGAYFMLGG-- 240
Query: 244 KHERIKLLESQLV--EGEGKPGEVI--NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFL 298
+R K+ +++ + + G ++ F I+ + G+ + ++ +Q G + ++I D+L
Sbjct: 241 --KRFKVWKAKPLTEKTSFPAGTLVTNKKKFVISMADGSQLELLEVQPTGKKKMNIKDYL 298
Query: 299 L--GCPVIIGCIV 309
G IG +
Sbjct: 299 NGQGSHFTIGDKI 311
>gi|261337954|ref|ZP_05965838.1| methionyl-tRNA formyltransferase [Bifidobacterium gallicum DSM
20093]
gi|270277449|gb|EFA23303.1| methionyl-tRNA formyltransferase [Bifidobacterium gallicum DSM
20093]
Length = 333
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 94/328 (28%), Positives = 157/328 (47%), Gaps = 26/328 (7%)
Query: 3 LRVVFMGTSEFAVATLQAL-VSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
L+V+F GT E AV +L+ L + H IV+V T+P P G RG K SAV + A E L
Sbjct: 2 LKVLFAGTPETAVPSLRKLAHDTDHFEIVAVLTRPDAPTG-RGRKLQPSAVKQAALELGL 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + ++ + A + VVVAYG ++ Q +L+A +G+ N H SLLP WRGAA
Sbjct: 61 PVIESDPKEETFVDELAATGAQIGVVVAYGNILRQHVLDALPMGWVNLHFSLLPEWRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRAI AGD+ TG + ++ + +D GPV + I ++ + L + L+ +H +
Sbjct: 121 PVQRAIWAGDSVTGTTVFQLTRGMDEGPVLAQSTMEIRAHDTSGELLERLAQDGSHLLAA 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ L + + PQ + A KI+ + V F V IRA +P PGAW +
Sbjct: 181 ALEALAEGRISPVPQPQGSFEVARKITTEDAAVRFKAPVFAVDRQIRACTPAPGAWAHLH 240
Query: 241 IGNKHE--------------RIKLLESQLVEG-------EGKPGE--VINPNFTIACSQG 277
E + +L++ + + +PG+ V + +
Sbjct: 241 ANAVAEDADAVEGKEAPAATVLHILKAVPADTEDMQVPDDLEPGKLVVTKKHVWVGTLTS 300
Query: 278 AVRIMRLQRAGGRVLDIGDFLLGCPVII 305
+ ++ ++ G + + D+ G +
Sbjct: 301 PLELLAVKPQGKKAMAAADWARGAHLDE 328
>gi|91214903|ref|ZP_01251876.1| methionyl-tRNA formyltransferase [Psychroflexus torquis ATCC
700755]
gi|91187330|gb|EAS73700.1| methionyl-tRNA formyltransferase [Psychroflexus torquis ATCC
700755]
Length = 309
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 96/302 (31%), Positives = 160/302 (52%), Gaps = 12/302 (3%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT EFAV L L +SS +IV V T P +PAG RG + SAV A L L PT
Sbjct: 1 MGTPEFAVGILDRLQTSSFNIVGVVTAPDKPAG-RGKQLKSSAVKTYALHHDLEVLQPTN 59
Query: 68 LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127
L E+++ L +VV ++P+ + + G +N HASLLP++RGAAPI AI+
Sbjct: 60 LKSEDFQDDLKRLDPNLIVVVAFRMLPKAVWDFPDYGTFNLHASLLPQYRGAAPINWAII 119
Query: 128 AGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQ 187
G+ +TG+ +D+ +DTG + + + I+ N L +L L A ++E + +EQ
Sbjct: 120 NGEKKTGVTTFFIDEEIDTGKIIDSKSISIAEKDNVETLHDKLMTLGADVVIETVKAIEQ 179
Query: 188 NNLPLSPQ-IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ Q + + A K++K T++++ +S + + IR LSPFP AW E+ I ++ +
Sbjct: 180 AKVEPQAQANISELKAAPKLTKENTKIDWKQSGNAIVDFIRGLSPFPVAWTELTIEDEIK 239
Query: 247 RIKLLES--QLVEGEGKPG------EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+IK+ ++ ++ + + + G E+ +A G V + LQ G + +++ L
Sbjct: 240 KIKVYKASFEISDHQKEIGSTGLNTEI--KTIDVAVKNGYVHLEELQFPGKKKMEVKALL 297
Query: 299 LG 300
G
Sbjct: 298 NG 299
>gi|89902618|ref|YP_525089.1| methionyl-tRNA formyltransferase [Rhodoferax ferrireducens T118]
gi|123091052|sp|Q21RP5|FMT_RHOFD RecName: Full=Methionyl-tRNA formyltransferase
gi|89347355|gb|ABD71558.1| methionyl-tRNA formyltransferase [Rhodoferax ferrireducens T118]
Length = 323
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 114/323 (35%), Positives = 165/323 (51%), Gaps = 21/323 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT EFA L L + H I V TQP RPAG RG+K SAV + A + L
Sbjct: 1 MRLIFAGTPEFARVALAQLHAGGHEIALVLTQPDRPAG-RGMKLQASAVKQFALDHGLAL 59
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ E ++ AD VV AYGL++PQ +L+ G +N HASLL
Sbjct: 60 AQPRSLRLDGKYPEDAAAAREALVAAQADAMVVAAYGLILPQWVLDVPARGCFNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RAI AGD +TG+ IM+MD LDTG + + +PI + T L L+ L
Sbjct: 120 PRWRGAAPIHRAIEAGDAQTGVTIMQMDAGLDTGAMLQAQAIPIGAGDTTGSLHDRLAEL 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A M++ + + +L Q G+TYA KI K E +++ + A + IRA +PFP
Sbjct: 180 GAQLMLQVLAQAVHGSLQPVAQAAQGVTYAPKIEKHEAAIDWTQPAAVIAQRIRAFNPFP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEG----EGKPGEVIN---PNFTIACSQGAVRIMRLQR 286
GA + E +K+ + + G + G ++ + + V I +LQR
Sbjct: 240 GATAVL----NGETLKIWLADVAPGVPPVSKEFGSILAVAPVGIEVVAMKSIVNITQLQR 295
Query: 287 AGGRVLDIGDFLLGCPVIIGCIV 309
GG+ L + +FL G + G +
Sbjct: 296 PGGKRLGVAEFLRGFDLQPGMVF 318
>gi|308177753|ref|YP_003917159.1| methionyl-tRNA formyltransferase [Arthrobacter arilaitensis Re117]
gi|307745216|emb|CBT76188.1| methionyl-tRNA formyltransferase [Arthrobacter arilaitensis Re117]
Length = 310
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 92/311 (29%), Positives = 148/311 (47%), Gaps = 10/311 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT + AV +L L + I +V T+P P G R S V +A+E LP
Sbjct: 1 MRILFAGTPQVAVTSLNYLHEAGFEIAAVLTRPDAPLG-RKRVLTPSPVAARAEELGLPI 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ K+ E Q N D A +VAYG ++P+ L+ G+ N H SLLP WRGAAP+
Sbjct: 60 IKAAKITDETTAQLAQLNLDAAAIVAYGGLVPEAALSVPTHGWINLHFSLLPDWRGAAPV 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q +I+ GD+ TG +++ LDTGPV I + LS + +V+ +
Sbjct: 120 QHSIINGDDITGAVTFQLETGLDTGPVFGQVTERIGELDTAGIMLDRLSESGSTLLVQTL 179
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE---- 238
L+ Q + TYA KI+ + ++F R+A + +PFPGAW++
Sbjct: 180 QALDSGQAVAIAQAGS-HTYAPKITDVDAELDFTRTATEIRRRAHGTTPFPGAWVKVDDK 238
Query: 239 -MMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
G ER ++ + E +PG+ P I + A+ ++Q G ++++ D+
Sbjct: 239 RFKFGPLRERREITDLDAGEVRIEPGK--QPKVLIGTATWALEPTQIQPPGKKMMNASDW 296
Query: 298 LLGCPVIIGCI 308
G + G
Sbjct: 297 ARGV-LTQGTK 306
>gi|325963041|ref|YP_004240947.1| methionyl-tRNA formyltransferase [Arthrobacter phenanthrenivorans
Sphe3]
gi|323469128|gb|ADX72813.1| methionyl-tRNA formyltransferase [Arthrobacter phenanthrenivorans
Sphe3]
Length = 306
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 86/300 (28%), Positives = 139/300 (46%), Gaps = 6/300 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT AV +L ALV + +V+V T+P P G R S V +A E +
Sbjct: 1 MRVLFAGTPAVAVPSLNALVEAGFQVVAVLTRPDAPIG-RKRILTPSPVAARAAELGIEV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ ++G + + + + DVA +VAYG ++P L + G+ N H SLLP WRGAAP+
Sbjct: 60 IHAARIGADTIARISALSPDVAAIVAYGGLVPPAALGVPRHGWINLHFSLLPAWRGAAPV 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRA+MAGD+ TG ++++ LDTGPV + L + LS A + + +
Sbjct: 120 QRAVMAGDDVTGAVTFQLEEGLDTGPVFGTLTETVGPEDTAGELLERLSHSGAVLLTQTL 179
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ PQ + + R+++ + A + R ++P PGAW +
Sbjct: 180 AAVAAGKAVARPQQGDVSLAPKLTLDDG-RLDWKKPALALGRQARGVTPEPGAWTVLDGQ 238
Query: 243 NKHERIKLLESQLVEGEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
L + PG V + + AV + R+Q AG +++ D+ G
Sbjct: 239 RVKLEPVRLRPDVA--GLAPGSLSVQGRSVLVGTGSHAVELTRIQPAGKKMMAAADWARG 296
>gi|291458603|ref|ZP_06597993.1| methionyl-tRNA formyltransferase [Oribacterium sp. oral taxon 078
str. F0262]
gi|291419136|gb|EFE92855.1| methionyl-tRNA formyltransferase [Oribacterium sp. oral taxon 078
str. F0262]
Length = 339
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 100/341 (29%), Positives = 166/341 (48%), Gaps = 45/341 (13%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT +FA L+AL+ + H I V TQP RP G R S V A+E +
Sbjct: 1 MRLIFMGTPDFAAEGLKALLGAGHEISLVLTQPDRPRG-RHSAPRKSEVRLLAEEHGISV 59
Query: 63 LVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P+ +E + + ++ VV A+G ++P+ +L G N HASLLPR+RGA+
Sbjct: 60 LTPSRLFTDEEAIGRIRELSPELIVVSAFGQLLPKEVLEIPDYGCVNIHASLLPRFRGAS 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI++GD E+G+ M+MD+ LDTG + VP++ + L ++LS L ++E
Sbjct: 120 PVQWAILSGDKESGVTTMQMDEGLDTGDILLQESVPLAKDETGGSLFEKLSKLGGKLILE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D LE+ + Q E G + K +N+ ++ + IRAL+P+PG++ ++
Sbjct: 180 TIDGLERGTIQRRRQPEEGALRVGLLKKSSGLLNWNEPSDRLERRIRALNPWPGSFSYLL 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGE-----------VI----------------------- 266
+++KL ++ + G GE ++
Sbjct: 240 G----KQLKLWKADSLPGGSDAGELSRIGRLDEERILLEAERAKLPREDFLFRGDAGELY 295
Query: 267 ----NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPV 303
+ I C +G +RI+ LQ G R +D FL G +
Sbjct: 296 LEKGRNDILIRCGEGFLRILELQEEGRRRMDAASFLRGRRI 336
>gi|254443248|ref|ZP_05056724.1| methionyl-tRNA formyltransferase [Verrucomicrobiae bacterium
DG1235]
gi|198257556|gb|EDY81864.1| methionyl-tRNA formyltransferase [Verrucomicrobiae bacterium
DG1235]
Length = 320
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 11/309 (3%)
Query: 8 MGTSEFAVATLQALVSSS----HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
MG+ A+ L+A V++ +V+VYTQP RP G RG K + + E LP
Sbjct: 1 MGSDSIALPALEA-VAAGRCGEIELVAVYTQPDRPRG-RGKKVAPNEIKTWTLERGLPVF 58
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K+G+ E + + AD +V+AYG ++ Q++++ K G +N H SLLP++RGA+PIQ
Sbjct: 59 QPEKMGKAERLEIEAMGADSILVMAYGHILSQKLIDTPKFGIWNLHTSLLPKYRGASPIQ 118
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
A+ +GD+ETG+++MKM + +D GPV + V I ++ +LS C + +
Sbjct: 119 CAVASGDSETGVSLMKMVREMDAGPVLDVECVSIGEEDTALDVEAKLSAACVPLLQRGLP 178
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ L+ Q ++ K+ K + ++F S + + I L P+ +G
Sbjct: 179 HAHAGDPTLAEQDPERASFVRKLGKEDGELDFRVSGKVLAKRINGLFPW--PATRACLGE 236
Query: 244 KHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
++ L S E E KPG V+ +AC G+V + RLQR GG++L +FL G
Sbjct: 237 VLIKVGLATSDDAELEAKPGTVMGIEPEGLRVACGHGSVLLKRLQRPGGKMLAAAEFLRG 296
Query: 301 CPVIIGCIV 309
+ +G +
Sbjct: 297 FDLPVGSVF 305
>gi|227484653|ref|ZP_03914969.1| possible methionyl-tRNA formyltransferase [Anaerococcus
lactolyticus ATCC 51172]
gi|227237373|gb|EEI87388.1| possible methionyl-tRNA formyltransferase [Anaerococcus
lactolyticus ATCC 51172]
Length = 311
Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 86/313 (27%), Positives = 159/313 (50%), Gaps = 12/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ + FMG +FA+ TL L + ++ V + + R K + V K A++ +
Sbjct: 2 INICFMGNPKFALQTLDILYRDENINLKLVVSGKDKKRSR--NKFSPTPVKKYAEDNGIR 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + EE+ L D VVVA+G +I + IL+ K N H SLLP +RGA+
Sbjct: 60 VETPDSVNTEEFLDLLKDLEIDYIVVVAFGQLIKKIILDGFKDRIINLHPSLLPLYRGAS 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q ++ GD +T +M ++K +D+G + R++ + + + L+ +L + A A+ +
Sbjct: 120 PMQFTLLNGDKKTAATVMLIEKGMDSGDILIQREMDVDPSDDYFDLEDKLGKIGAEAIRD 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ ++ Q + TY KI K ++++ +S+ + + IRAL FP A+ +
Sbjct: 180 AILNFDEVYENRLDQDDEKATYCTKIDKEMGKIDWNKSSREILDQIRALVGFPVAYFDYK 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
N +K+ ++ L + +G+ GE++ I S G++RI ++Q G + +D
Sbjct: 240 GEN----VKVHKASLADKKGQAGEILAANKKDKLIIGTSDGSIRIEKIQFPGKKAMDTTS 295
Query: 297 FLLGCPVIIGCIV 309
FLLG V +G ++
Sbjct: 296 FLLGNDVEVGFVL 308
>gi|238852567|ref|ZP_04642977.1| methionyl-tRNA formyltransferase [Lactobacillus gasseri 202-4]
gi|238834713|gb|EEQ26940.1| methionyl-tRNA formyltransferase [Lactobacillus gasseri 202-4]
Length = 314
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 93/313 (29%), Positives = 164/313 (52%), Gaps = 13/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT F LQ L+ + + +V TQP + G R SAV + A + +LP
Sbjct: 4 VIFLGTPNFGSVVLQGLIDQGYDVKAVVTQPDKRVG-RKQVVHQSAVKQTALKHNLPVYQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G +E + + D V AYG +P + L + K+ N H SLLP++RG APIQ
Sbjct: 63 PAKLSGSDELAELMKIEPDFIVTAAYGQFLPTKFLKSAKIAPVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETG+ IM+M K +D G + + +PI + + L +LS+L ++E +
Sbjct: 123 YSVLNGDKETGVTIMEMVKKMDAGDIFSQKALPIEDDDTSGTLFDKLSILGRDLLLETLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K + +PQ E+ + ++ ISK + ++ +AE +N IRAL+P PGA++ +
Sbjct: 183 KFIDGTVTRTPQNEDKVVFSPNISKEQEQIKLTMTAEQANNLIRALNPDPGAYVML---- 238
Query: 244 KHERIKLLESQLV--EGEGKPGEVI--NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFL 298
+R K+ +++ + + G ++ F I+ + G+ + ++ +Q G + ++I D+L
Sbjct: 239 DGKRFKIWKAKPLAEKTSFPAGTLVTNKKKFVISMADGSELELLEVQPTGKKKMNIKDYL 298
Query: 299 L--GCPVIIGCIV 309
G G +
Sbjct: 299 NGQGSHFTSGEKI 311
>gi|283769569|ref|ZP_06342465.1| methionyl-tRNA formyltransferase [Bulleidia extructa W1219]
gi|283103837|gb|EFC05223.1| methionyl-tRNA formyltransferase [Bulleidia extructa W1219]
Length = 309
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 88/301 (29%), Positives = 138/301 (45%), Gaps = 6/301 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ ++F GT EFA L+ L ++IV+V +QP G R L+ H+ A++ +P
Sbjct: 1 MNILFFGTPEFAREMLETLYQEEYNIVAVVSQPDNFVG-RKKIFTLTPTHEFAKDHHIPC 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL + E+ LS+ D + AYG IPQ IL K G N H SLLP++RG API
Sbjct: 60 LQPEKLKE-AVEEVLSYQPDFILSCAYGQFIPQTILEYPKYGCLNIHPSLLPKYRGGAPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AIM G+ ET +++MKM K +D G + R + I + L + L + + E +
Sbjct: 119 HHAIMNGEKETAVSLMKMVKKMDAGDIYAQRVIEIGEDERFYELNRRLIEVAKKIIREDL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ L Q E+ + ++K E V + + V + + + +I
Sbjct: 179 PLYFEGKLEAIVQDESQVILGLNVTKEEEMV-HFQREDIVQLYNHIRALYDWPMAYGVIQ 237
Query: 243 NKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K + ++V GEVI IAC G + + LQ G + +D +
Sbjct: 238 GKRVKFISCRKEIVHHSKAVGEVIGLEGKGLKIACQGGYLIVNELQPEGKKAMDAKSVMN 297
Query: 300 G 300
G
Sbjct: 298 G 298
>gi|323340707|ref|ZP_08080959.1| methionyl-tRNA formyltransferase [Lactobacillus ruminis ATCC 25644]
gi|323091830|gb|EFZ34450.1| methionyl-tRNA formyltransferase [Lactobacillus ruminis ATCC 25644]
Length = 315
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 94/313 (30%), Positives = 156/313 (49%), Gaps = 13/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
+VFMGT +F+ L+ L+ + + +V TQP R G R S V + A + + L
Sbjct: 4 IVFMGTPKFSAPILEGLIREGYDVKAVVTQPDRYVG-RKHVLTASPVKETAARYGIEVLQ 62
Query: 65 PTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K+ E ++ + D+ V A+G +P +++ A K+ N H SLLP++RG AP+Q
Sbjct: 63 PEKIFGSAEMDRIIELKPDLIVTAAFGQFLPNKLIEAAKVAAINVHGSLLPKYRGGAPVQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
AIM GD+ETG+ I+ M K +D G + K+PI N +TA + Q++S+L ++E +
Sbjct: 123 YAIMNGDSETGVTIIYMVKKMDAGAMLAQAKMPIEENDDTATVFQKMSILGRDTLLETIP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ + Q E + ++ I E ++ +A + IRAL P PGA+
Sbjct: 183 KILDGTIKPIAQNEERVVFSPTIKPKEEELSLESTARELDWKIRALRPSPGAYF---ADF 239
Query: 244 KHERIKLLESQLVEGEG--KPGEVINPNFTI---ACSQGAVR-IMRLQRAGGRVLDIGDF 297
+R KL + +++ + G V+ + A + G V I LQ AG + D+
Sbjct: 240 LGKRTKLWDISVLDEKTAFASGTVVEAGKHVLKMAAADGTVYMINELQPAGKPKMKATDY 299
Query: 298 LL--GCPVIIGCI 308
L G + +G
Sbjct: 300 LNGIGKGLEVGQK 312
>gi|42560985|ref|NP_975436.1| methionyl-tRNA formyltransferase [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|73919407|sp|Q6MTF8|FMT_MYCMS RecName: Full=Methionyl-tRNA formyltransferase
gi|42492482|emb|CAE77078.1| methionyl-tRNA formyltransferase [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|301321059|gb|ADK69702.1| methionyl-tRNA formyltransferase [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 317
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 83/302 (27%), Positives = 145/302 (48%), Gaps = 7/302 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
++VVF GT + L+AL+ + IV V +QP +P G R + V + V K A E +L
Sbjct: 4 KIKVVFCGTPKIGADVLKALIEMNQVEIVLVISQPDKPIG-RKKQIVHTPVKKLALENNL 62
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
V E Y+ D + A+G IP +IL K+ N H SLLP+ RG A
Sbjct: 63 KV-VQPNKIGEIYDDLAKLEFDFLITCAFGQFIPTKILKLAKIDSINFHGSLLPKLRGGA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI GD +TGI IM+M K +D G + I + ++ L +++ L +
Sbjct: 122 PIQYAIKNGDKKTGITIMQMVKQMDAGDYYVQESIDILDSDDSGSLFEKMGHLAYSMCKK 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + L Q E+ +T+ + IS E ++N+ ++ ++ N IR+LSP P ++ +
Sbjct: 182 YLVDIYNHKFELIKQNEDEVTFCKNISSEEEKINWNNTSLDIFNLIRSLSPSPISYTTIN 241
Query: 241 IGNKHERI-KLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ K+++ PG ++ + A+ I+ +Q+ G +++ +
Sbjct: 242 NQRYKIKSSKVIDLDNQNKNAIPGTILGINKQGIVVKTLDKALLILEIQKEGKKMILASN 301
Query: 297 FL 298
+
Sbjct: 302 YY 303
>gi|262066172|ref|ZP_06025784.1| methionyl-tRNA formyltransferase [Fusobacterium periodonticum ATCC
33693]
gi|291380146|gb|EFE87664.1| methionyl-tRNA formyltransferase [Fusobacterium periodonticum ATCC
33693]
Length = 310
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 84/315 (26%), Positives = 167/315 (53%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT FA+ +L+ L ++ + ++SV+T+ + RG K + S + A +L
Sbjct: 1 MKIIFMGTPTFALPSLEKL-NARYELLSVFTKIDK-VNARGNKIIYSPIKDFALANNLKI 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E+ + D+ VVVAYG ++P+ +L+ K G N H+SLLPR+RGAAP
Sbjct: 59 YQPENFKDNALIEEIRAMEPDLIVVVAYGKILPKEVLDIPKYGVINLHSSLLPRFRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD+++G++IM +++ LD GPV ++ IS L L + A +++A
Sbjct: 119 INAAIIHGDSKSGVSIMYVEEELDAGPVILQKETEISDEDTFLTLHDRLKDMGADLLIDA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ ++ N + + Q +N +T+ + K + ++++ +++ + N IR ++P P A+ +
Sbjct: 179 IELIKDNKVNVKVQDKNLVTFVKPFKKEDCKIDWSKTSREIFNFIRGMNPVPTAFSMLDN 238
Query: 242 GNKHERIKLLESQLVEG---EGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDI 294
IK+ E+++ + + GEV+ + + G++ I + + +
Sbjct: 239 S----IIKIYETKIYDKTYDKASCGEVVEYLKGKGVVVKTADGSLIITSAKPENKKQISG 294
Query: 295 GDFLLGCPVIIGCIV 309
D + G + IG +
Sbjct: 295 VDLINGKFLKIGEKL 309
>gi|329913546|ref|ZP_08275971.1| Methionyl-tRNA formyltransferase [Oxalobacteraceae bacterium
IMCC9480]
gi|327545310|gb|EGF30552.1| Methionyl-tRNA formyltransferase [Oxalobacteraceae bacterium
IMCC9480]
Length = 323
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 124/320 (38%), Positives = 170/320 (53%), Gaps = 20/320 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L A+ ++ I V TQP RPAG RG++ SAV + A +P
Sbjct: 1 MKIIFAGTPEFAAVALAAIHAAGFDIPLVLTQPDRPAG-RGMQLHASAVKQFALAHGIPV 59
Query: 63 LVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P L + + DV VV AYGL++P +L G N HASLL
Sbjct: 60 AQPVSLRLDGKYPDVASEADALLRATAHDVMVVAAYGLILPPSVLAIPPSGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RAI AGD ETGI IM+MDK LDTGP+ + ++ I ++ T L L+ L
Sbjct: 120 PRWRGAAPIHRAIEAGDPETGITIMQMDKGLDTGPMLLVERLAIDADDTTGSLHDRLATL 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+V+A+ +LE+ L + Q E G YA KISK E ++F + AE + IRA P P
Sbjct: 180 GGKLIVDALRQLERGPLLATEQPETGTCYAAKISKEEAALDFAQPAELLARKIRAFHPAP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGE--GKPGEVINP----NFTIACSQGAVRIMRLQRA 287
GA + IK+ +++V PGE+I IAC A+R+ LQ+
Sbjct: 240 GASALIGG----VAIKIWRAEVVACSELALPGEIIAADAVSGLVIACGHSALRLTELQKP 295
Query: 288 GGRVLDIGDFLLGCPVIIGC 307
GG+ L +FL G P+ G
Sbjct: 296 GGKRLPASEFLKGFPIAAGT 315
>gi|116618608|ref|YP_818979.1| methionyl-tRNA formyltransferase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116097455|gb|ABJ62606.1| methionyl-tRNA formyltransferase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 321
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 105/319 (32%), Positives = 166/319 (52%), Gaps = 16/319 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT VV MGT FAV L+AL+ +++ + +V TQP RP G R S V A +
Sbjct: 1 MTYSVVLMGTPSFAVPILEALLENNNYDVKAVVTQPDRPQG-RKHTLTPSPVKVAALAQN 59
Query: 60 LPALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P K+ E +Q + N D V A+G +P ++L+A K+ N HASLLP++RG
Sbjct: 60 VPVLQPEKISGSPEMQQVIDINPDFIVTAAFGQFLPTKLLDAAKIAAVNTHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP+ AIM GD ETG++IM M K +D G V KVPI+S N + +LS+ +
Sbjct: 120 GAPVHYAIMNGDKETGVSIMYMVKKMDAGDVIDTIKVPITSTDNVGTMFDKLSIAGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNF-CRSAENVHNHIRALSPFPGAWL 237
++ + K+ N+ Q E +T++ I +NF +A+ + HIR L P A++
Sbjct: 180 LKTLPKIATGNIDPVVQNEEEVTFSPNIPHDMQNLNFATETAQELDWHIRGLYPTHPAFV 239
Query: 238 EMMIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRV 291
+++ +R+K+ + + +PG ++ +A + G V+I RLQ AG
Sbjct: 240 QVLD----QRVKITDVTPLSELTAQEPGTIVEKSKKQLKVASANGTVVQINRLQPAGKSE 295
Query: 292 LDIGDFLLGCP--VIIGCI 308
+ I +L G + +G
Sbjct: 296 MAISAYLNGAGKDLEVGQK 314
>gi|227431999|ref|ZP_03914019.1| methionyl-tRNA formyltransferase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227352284|gb|EEJ42490.1| methionyl-tRNA formyltransferase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 321
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 105/319 (32%), Positives = 165/319 (51%), Gaps = 16/319 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT VV MGT FAV L+AL+ ++ + + +V TQP RP G R S V A
Sbjct: 1 MTYSVVLMGTPSFAVPILEALLENNDYDVKAVVTQPDRPQG-RKHTLTPSPVKVAALAHD 59
Query: 60 LPALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P K+ E +Q + N D V A+G +P ++L+A K+ N HASLLP++RG
Sbjct: 60 VPVLQPEKISGSPEMQQVIDINPDFIVTAAFGQFLPTKLLDAAKIAAVNTHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP+ AIM GD ETG++IM M K +D G V KVPI+S N + +LS+ +
Sbjct: 120 GAPVHYAIMNGDKETGVSIMYMVKKMDAGDVIDTIKVPITSTDNVGTMFDKLSIAGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNF-CRSAENVHNHIRALSPFPGAWL 237
++ + K+ N+ Q E +T++ I +NF +A+ + HIR L P A++
Sbjct: 180 LKTLPKIATGNIDPVVQNEEEVTFSPNIPHDMQNLNFATETAQELDWHIRGLYPTHPAFV 239
Query: 238 EMMIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRV 291
+++ +R+K+ + + +PG ++ +A + G V+I RLQ AG
Sbjct: 240 QVLD----QRVKITDVTPLSELTVQEPGTIVEKSKKQLKVASANGTVVQINRLQPAGKSE 295
Query: 292 LDIGDFLLGCP--VIIGCI 308
+ I +L G + +G
Sbjct: 296 MAISAYLNGAGKDLEVGQK 314
>gi|256384378|gb|ACU78948.1| methionyl-tRNA formyltransferase [Mycoplasma mycoides subsp. capri
str. GM12]
gi|256385210|gb|ACU79779.1| methionyl-tRNA formyltransferase [Mycoplasma mycoides subsp. capri
str. GM12]
gi|296455712|gb|ADH21947.1| methionyl-tRNA formyltransferase [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 317
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 84/306 (27%), Positives = 152/306 (49%), Gaps = 15/306 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+++VF GT + L+AL+ + +V V +QP +P G R + V + V K A E +L
Sbjct: 4 KIKIVFCGTPKIGADVLKALIEMNQVEVVLVISQPDKPIG-RKKQIVYTPVKKLALENNL 62
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
V E Y+ D + A+G IP +IL K+ N H SLLP+ RG A
Sbjct: 63 KV-VQPNKIGEIYDDLAKLEFDFLITCAFGQFIPTKILKLAKIDSINFHGSLLPKLRGGA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI GD +TGI IM+M K +D G + I + ++ L +++ L +
Sbjct: 122 PIQYAIKNGDKKTGITIMQMVKQMDAGDYYVQESIDILDSDDSGSLFEKMGQLAYSMCKK 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + L Q E+ +T+ + IS E ++N+ ++ ++ N IR+LSP P ++ +
Sbjct: 182 YLVDIYNHKFELIKQNEDEVTFCKNISSEEEKINWNNTSLDIFNLIRSLSPSPISYTTI- 240
Query: 241 IGNKHERIKLLESQLVEGEGK-----PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
++R K+ S++++ + + PG +I + A+ I+ +Q+ G +++
Sbjct: 241 ---NNQRYKIKSSKVIDLDNQNKNVMPGTIIDINKQGIVVKTLDKALLILEIQKEGKKMI 297
Query: 293 DIGDFL 298
++
Sbjct: 298 LASNYY 303
>gi|93007291|ref|YP_581728.1| methionyl-tRNA formyltransferase [Psychrobacter cryohalolentis K5]
gi|92394969|gb|ABE76244.1| methionyl-tRNA formyltransferase [Psychrobacter cryohalolentis K5]
Length = 363
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 112/340 (32%), Positives = 169/340 (49%), Gaps = 37/340 (10%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS----SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
L+VVF GT EFA +L+AL+ + SIV+VY+QP R AG RG K SAV + A
Sbjct: 24 PLKVVFAGTPEFAAVSLEALIKQQQALNISIVAVYSQPDRKAG-RGQKLAASAVKQVALA 82
Query: 58 FSLPALVPTKLGQ------EEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
+ P + + + DV +V AYGL++P +LN G N HAS
Sbjct: 83 HDIAVEQPETFKKSSIEGVIARQTLQDYQPDVMIVAAYGLILPVGVLNTPTYGCLNIHAS 142
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLPRWRGAAPI RA++AGD+ETG+ IM+M+K LDTG + + I S+ A L +++
Sbjct: 143 LLPRWRGAAPIHRALLAGDSETGVTIMQMNKGLDTGDMLYKVSASIESDDTAASLHDKMA 202
Query: 172 VLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
L A A++ + L Q ++ YAEK+ K E +++ +SA + IR L+P
Sbjct: 203 ELGATAIITVLQDLPHYQAQAIVQDDSQANYAEKLVKNEGEIDWTQSATVIERQIRGLTP 262
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEG----EGKPGEVINPN---FTIACSQG------- 277
+PGA+ + +R+K+L S V + + G VI+ +AC +
Sbjct: 263 WPGAYTFLAG----QRVKILASLPVNASQPTDKQAGTVISVGRKAILVACGKDNNIDTDV 318
Query: 278 --------AVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ + +LQ AG + + G + G
Sbjct: 319 NSEKPQASTLAVTQLQFAGSKPVSAEQICHGNQLNDGDQF 358
>gi|314933390|ref|ZP_07840755.1| methionyl-tRNA formyltransferase [Staphylococcus caprae C87]
gi|313653540|gb|EFS17297.1| methionyl-tRNA formyltransferase [Staphylococcus caprae C87]
Length = 310
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 106/308 (34%), Positives = 168/308 (54%), Gaps = 13/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ +++FMGT +F+ L+ L+ + H +++V TQP RP G R V K A E +
Sbjct: 1 MS-KIIFMGTPDFSTKVLEMLI-AEHDVIAVVTQPDRPVG-RKKVMTPPPVKKVALEHDI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P K E E+ L+ +AD+ V A+G ++P+ +LNA +LG N HASLLP++RG
Sbjct: 58 KIYQPEKLKDSAELEELLTLDADLIVTAAFGQLLPESLLNAPRLGAINVHASLLPKYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI IM M K LD G + + + I + N + +LS L A +
Sbjct: 118 APIHQAIIDGEAETGITIMYMVKKLDAGNIISQKAINIEEDDNVGTMHDKLSFLGADLLR 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E M + PQ + T+A IS+ + R+N+ +SA+++HNHIR LSP+P A+ M
Sbjct: 178 ETMPSIINETNDSIPQDDAKATFASNISREDERINWNQSAQDIHNHIRGLSPWPVAYTTM 237
Query: 240 MIGNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDI 294
N +KL + ++ G G G++I I A+ + +Q AG + + +
Sbjct: 238 DDKN----LKLFSAHVITGKNGDTGKIIETTKKAIIIGTGSNDAIALTDMQLAGKKRMLV 293
Query: 295 GDFLLGCP 302
++L G
Sbjct: 294 ANYLSGVQ 301
>gi|146328824|ref|YP_001209087.1| methionyl-tRNA formyltransferase [Dichelobacter nodosus VCS1703A]
gi|259646028|sp|A5EWL9|FMT_DICNV RecName: Full=Methionyl-tRNA formyltransferase
gi|146232294|gb|ABQ13272.1| methionyl-tRNA formyltransferase [Dichelobacter nodosus VCS1703A]
Length = 314
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 122/303 (40%), Positives = 157/303 (51%), Gaps = 7/303 (2%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
+ F GT EFA A L ALV S+ V TQP RPAG RG K SAV +A+ + LP
Sbjct: 6 IWFAGTPEFATAALDALVK-HVSVAGVLTQPDRPAG-RGRKLKASAVKARAEHYQLPIAQ 63
Query: 65 PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
P +L + D+ VVVAYGL++PQ L+ +LG N HASLLPRWRGAAPIQR
Sbjct: 64 PERLQESAPPFAHLPRPDIVVVVAYGLLLPQWFLDYPRLGCINIHASLLPRWRGAAPIQR 123
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
AI AGD ETGI+IM+MD LDTG V +++PI + L L L A A+++ +
Sbjct: 124 AIEAGDEETGISIMQMDAGLDTGAVWLEKRLPIGEQSASQ-LHDALMQLGAEALIDVLPD 182
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
+ PQ +G YA K+SK E +N+ A N+ IRA FP A+ +
Sbjct: 183 ILAQARAPIPQPSSGACYAHKLSKAEAEINWQDDAANIVRKIRAFDLFPVAYSYLDDAPV 242
Query: 245 HERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+ S+ E G VI I C G +RI RLQ AG V+ GC
Sbjct: 243 RFYDGIALSEHTE-SAPAGTVIEHNQEGIDIVCGSGILRIKRLQLAGKNVVSAAALANGC 301
Query: 302 PVI 304
+
Sbjct: 302 HLK 304
>gi|289450691|ref|YP_003475240.1| methionyl-tRNA formyltransferase [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289185238|gb|ADC91663.1| methionyl-tRNA formyltransferase [Clostridiales genomosp. BVAB3
str. UPII9-5]
Length = 323
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 99/325 (30%), Positives = 160/325 (49%), Gaps = 23/325 (7%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT LR++FMGT E+A +LQAL+ + V +QP +P G R + + V + A +
Sbjct: 1 MTDLRIIFMGTPEYATYSLQALIEADLKPVLCVSQPDKPWG-RKQVILPTPVKELAVANN 59
Query: 60 LPALVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P K+ E+++ L+ + D+ V AYG ++PQ IL+ +LG N H SLLPR+RG
Sbjct: 60 IPVLQPVKIKTAEFQENLADYRPDLIVTAAYGRILPQNILDLPRLGCINVHGSLLPRYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+P+Q++I+ GD TGI I++M +D G + +P+ N A L EL L +
Sbjct: 120 ASPVQQSIINGDEITGITILRMTMAMDAGDILRQASIPLKDEYNVATLMTELGKLGGTVL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ L + PQ E TY + + +++F RSA + N +R P+PGA+
Sbjct: 180 PGTIKDLVAGKISEIPQDETKATYVSLLDRSVGKIDFTRSARTIFNLVRGTDPWPGAYTG 239
Query: 239 MMIGNKHERIKLLESQLVEGEGK-----------PGEVI---NPNFTIACSQGAVRIMRL 284
+R+K+ S +++ PGE++ + G + + L
Sbjct: 240 Y----NGKRLKIYRSHVIDTHSAEVGKYNIAKYFPGEILPAPKGELWVGTGDGILALDEL 295
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
Q GG+ LD D +G
Sbjct: 296 QFTGGKRLDARD--CAHNFAVGSSF 318
>gi|92114985|ref|YP_574913.1| methionyl-tRNA formyltransferase [Chromohalobacter salexigens DSM
3043]
gi|123265562|sp|Q1QTJ4|FMT_CHRSD RecName: Full=Methionyl-tRNA formyltransferase
gi|91798075|gb|ABE60214.1| methionyl-tRNA formyltransferase [Chromohalobacter salexigens DSM
3043]
Length = 325
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 137/318 (43%), Positives = 181/318 (56%), Gaps = 10/318 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LRVVF GT +FA A+L AL+ S H +V+ YTQP RPAG RG K S V AQE LP
Sbjct: 4 SLRVVFAGTPDFAAASLLALLDSRHQVVAAYTQPDRPAG-RGRKLTPSPVKALAQEHGLP 62
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
PT L + +Q L+ ADV VVVAYGL++PQ +L+ +LG N HASLLPRWRGAA
Sbjct: 63 VHQPTSLKDTDAQQTLAALEADVLVVVAYGLILPQAVLDIPRLGCLNVHASLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAI AGD +G+ IM+MD LDTG + +R+ PI++ L L+ L A+VE
Sbjct: 123 PIQRAIEAGDTRSGVTIMQMDAGLDTGAMLLVRETPITATTTGGELHDRLAPLGGEAIVE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+D L + L +PQ G+TYA K+SK E ++F R A + +RA +P+P AW +
Sbjct: 183 ALDALATDGLTATPQPSEGVTYAAKLSKAEAELDFTRPAHELAARVRAFNPWPVAWTRLA 242
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACS-QG--AVRIMRLQRAGGRVLDI 294
+ E++ PG ++ IAC G VRI R Q GG+ L +
Sbjct: 243 GEPLRLWLAEAEAEAERPGVAPGTLLQSAPDALRIACGHDGTQVVRITRAQLPGGKPLAV 302
Query: 295 GDFLL--GCPVIIGCIVG 310
D L G G +G
Sbjct: 303 RDLLNARGERFPEGLRLG 320
>gi|312195557|ref|YP_004015618.1| methionyl-tRNA formyltransferase [Frankia sp. EuI1c]
gi|311226893|gb|ADP79748.1| methionyl-tRNA formyltransferase [Frankia sp. EuI1c]
Length = 312
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 88/312 (28%), Positives = 153/312 (49%), Gaps = 6/312 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT A+ +L+ L+ S H + +V T+P RPAG RG S V + A E +
Sbjct: 1 MRLVFAGTPAVAIPSLRRLLDSPRHEVAAVVTRPDRPAG-RGRHLARSPVAELADEAGVE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + ++ + + D A VVAYG ++P+ L+ + G+ N H SLLP +RGAA
Sbjct: 60 VLAPERPRDPDFLSRLTAIAPDCAPVVAYGALLPKAALDIPRHGWVNLHFSLLPAYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRA++AG++ TG ++ ++++ LD+GPV + + + L + L+V+ + ++
Sbjct: 120 PVQRAVLAGEDITGASVFQIEEGLDSGPVFGTLTERVRARDTSGDLLERLAVVGSELLLA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ +G+T A K++ E RV++ + +RA +P PG W
Sbjct: 180 TMDGIEDGVLEPRPQPADGVTIAPKLTVEEVRVDWTLPDFAIDRLVRAATPAPGPWTTFR 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ V+ PG+++ + AV + ++ G + +
Sbjct: 240 GARVKLGPVRPAAGAVQTPLPPGQLVVAGKDTVAVGTGTTAVLLGEVRPEGKAPMPAAAW 299
Query: 298 LLGCPVIIGCIV 309
G G
Sbjct: 300 ARGIRPTDGEAF 311
>gi|289644961|ref|ZP_06477002.1| methionyl-tRNA formyltransferase [Frankia symbiont of Datisca
glomerata]
gi|289505234|gb|EFD26292.1| methionyl-tRNA formyltransferase [Frankia symbiont of Datisca
glomerata]
Length = 341
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 98/345 (28%), Positives = 157/345 (45%), Gaps = 43/345 (12%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+RVVF GT A+ +L+AL+ SS H +V+V T+P RPAG RG K S V A+E +
Sbjct: 1 MRVVFAGTPAVALPSLRALLDSSRHDVVAVVTRPDRPAG-RGRKVAHSPVRTLAEERGVE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K ++ + D VVAYG ++P+ L+ + G+ N H SLLP WRGAA
Sbjct: 60 VLTPQKPRDPDFLARLTEIAPDCCPVVAYGALLPRAALDIPRHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRA++AGD+ TG ++ ++++ LD+GPV P+ + L L+ + +V
Sbjct: 120 PVQRALLAGDDVTGASVFQIEEALDSGPVYGTLTEPVGPHDTAGDLLARLADAGSRLLVA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + +L PQ G++ A K+ + R+++ A V IRA +P PGAW
Sbjct: 180 VLDGIADGSLRAWPQRSEGVSIAPKLDVADVRIDWSAPAYRVDRLIRAATPAPGAWTTFR 239
Query: 241 IGNKHERIKLLESQLVE---------------------------------GEGKPGEVI- 266
RIK+ + V + PG++
Sbjct: 240 DH----RIKIGPVRPVTVVETTAVVTAVAAGKGDGGTGAAGGDSATSLGIEDLAPGQIAV 295
Query: 267 --NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ + G V + ++ G + + G + G
Sbjct: 296 GGHGRIAVGTGGGVVLLDEVRPEGRPTMAADAWARGARIAAGERF 340
>gi|307720688|ref|YP_003891828.1| methionyl-tRNA formyltransferase [Sulfurimonas autotrophica DSM
16294]
gi|306978781|gb|ADN08816.1| methionyl-tRNA formyltransferase [Sulfurimonas autotrophica DSM
16294]
Length = 304
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 89/308 (28%), Positives = 161/308 (52%), Gaps = 9/308 (2%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
V+FMGT ++A LQ L+ + ++V+VYTQP +P G R V AQE+++P
Sbjct: 3 NVIFMGTPDYAQKILQRLIDTGDINVVAVYTQPDKPVG-RKKVLTPPPVKTTAQEYNIPV 61
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P KL E+ + L +VVA I R + N HAS+LP++RGA+PI
Sbjct: 62 YQPQKLRDEKTVEKLLTIPCDFIVVAAYGQILPRKV-LDHAPCINLHASILPQYRGASPI 120
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q+ ++ GD TG+ M M++ LDTG + + + + ++ L ++L+ + A ++ +
Sbjct: 121 QQTLLHGDKITGVTAMLMEEGLDTGDILKIETIAVDDDMMVEELFEQLTEIAAALTIDVL 180
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
N Q E T+ +KI+K + V+F +A+ ++N RA +P+PG + + G
Sbjct: 181 --HNFNVYTPKKQNEAEATHCKKITKADGEVSF-DNAQELYNKYRAFTPWPGIY--LSSG 235
Query: 243 NKHERIKLLES-QLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
K +++KL + + + GK + + + C QG++RI ++Q + +D+ ++ G
Sbjct: 236 LKLKKMKLESADEAHQDAGKIITIDKESIVVTCKQGSLRIYKVQPQSKKEMDVLSYINGK 295
Query: 302 PVIIGCIV 309
V + +
Sbjct: 296 RVTLEDTL 303
>gi|224826195|ref|ZP_03699298.1| methionyl-tRNA formyltransferase [Lutiella nitroferrum 2002]
gi|224601832|gb|EEG08012.1| methionyl-tRNA formyltransferase [Lutiella nitroferrum 2002]
Length = 306
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 128/312 (41%), Positives = 180/312 (57%), Gaps = 11/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA A LQAL+ + H I V TQP RPAG RG+K S V A + L
Sbjct: 1 MKLIFAGTPEFAAAALQALLDAGHDIPLVLTQPDRPAG-RGMKLKPSPVKVLALQHGLRV 59
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P T E A+V VV AYGL++PQ +L G N HASLLPRWRGAAP
Sbjct: 60 EQPLTLKTPEAQALIAEVGAEVMVVAAYGLLLPQAVLELPAQGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA++AGD+ETGI IM+MD LDTG + + + I+++ A L L+ A A+V+
Sbjct: 120 IQRALLAGDSETGITIMQMDVGLDTGAMLSVHPLSIAADETAATLHDRLAEAGARAIVDT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L+ + Q E G+TYA+K+SK E V++ + A ++ IRA +P PGA+ +
Sbjct: 180 LARLD--AITPVAQPEEGVTYAQKLSKAEAEVDWSQPATDIARAIRAYNPVPGAFTRLAG 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
E +KL + EG G+PG V++ +A G VR+ +LQ AGG+ L DF+
Sbjct: 238 ----EPLKLWLASAEEGRGEPGTVLSADADGVRVAAGSGVVRLTQLQAAGGKRLAARDFV 293
Query: 299 LGCPVIIGCIVG 310
G P + G +G
Sbjct: 294 AGRPDLTGTRLG 305
>gi|39931283|sp|Q8DHS1|FMT_THEEB RecName: Full=Methionyl-tRNA formyltransferase
Length = 331
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 106/327 (32%), Positives = 156/327 (47%), Gaps = 23/327 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ +V+ GT EFA+A LQ L+ + + ++ V TQP R G RG + S V A LP
Sbjct: 1 MNIVYFGTPEFALAPLQRLLQTETYQVLGVVTQPDRRRG-RGNQLSPSPVKAFALRHGLP 59
Query: 62 ALVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P +L Q+ S ADV VVVAYG ++PQ IL+ + G N H SLLPR+RGA
Sbjct: 60 IWQPPRLRQDPQLPEVLRSLAADVFVVVAYGQILPQSILDIPRYGCINIHGSLLPRYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ A+ G+ ETG+ M MD LDTGP+ RKV I N L +LS A ++
Sbjct: 120 APIQWALYHGEEETGVTTMLMDAGLDTGPMLLKRKVRIHLEDNATTLSAKLSETGADLLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + +L Q PQ + TYA I K + +++ RSA +HN +RA P+ +
Sbjct: 180 DTLQQLPQLQAE--PQNDAEATYAPLIQKSDYAIDWGRSALALHNQVRAFYPYAYTQWQG 237
Query: 240 MIGNKHERIKLLE-------------SQLVEGEGKPGEVI----NPNFTIACSQGAVRIM 282
+ L+ + E PG V+ + +G + +
Sbjct: 238 TALKILQTWPLIPEVAAKLPEPLQSYVREPEAAAPPGTVLALIKGWGPVVQTGKGPLLLS 297
Query: 283 RLQRAGGRVLDIGDFLLGCPVIIGCIV 309
++Q +G + DF+ G + I
Sbjct: 298 QVQLSGRKAQSGWDFVNGVRLAIATQF 324
>gi|268319211|ref|YP_003292867.1| hypothetical protein FI9785_725 [Lactobacillus johnsonii FI9785]
gi|262397586|emb|CAX66600.1| fmt [Lactobacillus johnsonii FI9785]
Length = 314
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 95/313 (30%), Positives = 164/313 (52%), Gaps = 13/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT F LQ L+ + I +V TQP + G R SAV + A + +LP
Sbjct: 4 VIFLGTPNFGSVVLQGLIEQGYEIKAVVTQPDKRVG-RKQVVHQSAVKETALKHNLPVYQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G EE + + D + AYG +P + L + K+ N H SLLP++RG APIQ
Sbjct: 63 PAKLSGSEELAELMKIEPDFIITAAYGQFLPTKFLKSAKVAPVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETG+ IM+M K +D G + + + I+ + L +LSVL ++E +
Sbjct: 123 YSVLNGDKETGVTIMEMVKKMDAGDIFAQKALTITDEDTSGTLFDKLSVLGRDLLLETLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K + + Q E+ + ++ ISK + ++N +A+ +N IRAL+P PGA+ +
Sbjct: 183 KFIDGTVTRTAQDEDKVVFSPNISKDQEKINLTMTAKEANNLIRALNPDPGAYFMLGG-- 240
Query: 244 KHERIKLLESQLV--EGEGKPGEVI--NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFL 298
+R K+ +++ + + G ++ F I+ + G+ + ++ +Q G + ++I D+L
Sbjct: 241 --KRFKVWKAKPLTEKTSFPAGTLVTNKKKFVISMADGSQLELLEVQPTGKKKMNIKDYL 298
Query: 299 L--GCPVIIGCIV 309
G IIG +
Sbjct: 299 NGQGSHFIIGDKI 311
>gi|227890277|ref|ZP_04008082.1| methionyl-tRNA formyltransferase [Lactobacillus johnsonii ATCC
33200]
gi|227849091|gb|EEJ59177.1| methionyl-tRNA formyltransferase [Lactobacillus johnsonii ATCC
33200]
Length = 314
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 95/313 (30%), Positives = 164/313 (52%), Gaps = 13/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT F LQ L+ + I +V TQP + G R SAV + A + +LP
Sbjct: 4 VIFLGTPNFGSVVLQGLIEQGYEIKAVVTQPDKRVG-RKQVVHQSAVKETALKHNLPVYQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G EE + + D + AYG +P + L + K+ N H SLLP++RG APIQ
Sbjct: 63 PAKLSGSEELAELMKIEPDFIITAAYGQFLPTKFLKSAKVAPVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETG+ IM+M K +D G + + + I+ + L +LSVL ++E +
Sbjct: 123 YSVLNGDKETGVTIMEMVKKMDAGDIFAQKALTITDEDTSGTLFDKLSVLGRDLLLETLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K + + Q E+ + ++ ISK + ++N +A+ +N IRAL+P PGA+ +
Sbjct: 183 KFIDGTVTRTAQDEDKVVFSPNISKDQEKINLTMTAKEANNLIRALNPDPGAYFMLGG-- 240
Query: 244 KHERIKLLESQLV--EGEGKPGEVI--NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFL 298
+R K+ +++ + + G ++ F I+ + G+ + ++ +Q G + ++I D+L
Sbjct: 241 --KRFKVWKAKPLTEKTSFPAGTLVTNKKKFVISMADGSQLELLEVQPTGKKKMNIKDYL 298
Query: 299 L--GCPVIIGCIV 309
G IIG +
Sbjct: 299 NGQGSHFIIGDKI 311
>gi|224372364|ref|YP_002606736.1| methionyl-tRNA formyltransferase [Nautilia profundicola AmH]
gi|223588793|gb|ACM92529.1| methionyl-tRNA formyltransferase [Nautilia profundicola AmH]
Length = 294
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 87/309 (28%), Positives = 141/309 (45%), Gaps = 22/309 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMG+ ++AV L L + + IV++YTQP +P G R + V K A E SL
Sbjct: 1 MRIVFMGSPDYAVKILDEL-NKRYDIVALYTQPDKPVG-RKKVLTPTPVKKYALENSLEV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P+ L +E L + V L + N HASLLP++RGA+PI
Sbjct: 59 FTPSSLRDDEIIAGLKPDFIVVAAYGLLLPEKILNIA----PCINLHASLLPKYRGASPI 114
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD TG+ M MD LDTG + + + + +
Sbjct: 115 QSAILNGDEYTGVTAMLMDVGLDTGDILTWDYTEVGRKTSIDLFNELAVIAAKQTPFVID 174
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + QI+ +Y+ KI K + V F SA + RA P+PG +
Sbjct: 175 NFSKI---KPLKQIDAFASYSPKIKKQDGYVTF-ESALIIDRKYRAFQPWPGIYC----- 225
Query: 243 NKHERIKLLESQLVEGEG--KPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ K+ E +LV+ + K GE+ IN + C++G ++++++Q G + + D++
Sbjct: 226 ---DAFKINEMELVDTDSVNKAGEILEINDGVVVGCAKGKIKLLKIQVPGKKEVKAIDYV 282
Query: 299 LGCPVIIGC 307
G + G
Sbjct: 283 NGKRLKAGD 291
>gi|329770488|ref|ZP_08261866.1| methionyl-tRNA formyltransferase [Gemella sanguinis M325]
gi|328836237|gb|EGF85906.1| methionyl-tRNA formyltransferase [Gemella sanguinis M325]
Length = 320
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 93/320 (29%), Positives = 151/320 (47%), Gaps = 17/320 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++VFMGT +FAV LQ L+ + + + V TQP + G R V + A +
Sbjct: 3 KKKIVFMGTPKFAVPILQMLIEN-YGVDLVITQPDKKVG-RKKILTPPPVKEVAVAHDIR 60
Query: 62 ALVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K+ ++E N D+ + AYG ++P+ IL K N H SLLP+ RG
Sbjct: 61 VLQPEKISKDEDTLNELKQLNPDIIITAAYGQLVPESILEIPKYKCINVHGSLLPKLRGG 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ +I+ +TGI IM M K LD G + +V I + N L +LS+ +
Sbjct: 121 APIQYSIIEDHKKTGITIMYMVKKLDAGDMISKVEVDILDSDNYETLHDKLSIAGRDLLY 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + + N+ Q +N T+A I + + ++++ +A + N IRAL P PGA+ +
Sbjct: 181 ETLPNIFSGNISPEKQDDNEATFASNILREDEKIDWSCTAREIFNKIRALDPMPGAFTHL 240
Query: 240 MIGNKHERIKLLESQLVEGEGKP-----GEVI---NPNFTIACSQG-AVRIMRLQRAGGR 290
+K+ S+ + G +I N + C ++I LQ +G +
Sbjct: 241 DNN----ILKIWSSEETLLNEEIPFEDVGSIIKQDKKNIYVLCGNNTVLKIKELQVSGKK 296
Query: 291 VLDIGDFLLGCPVIIGCIVG 310
+ + +FL +G I+G
Sbjct: 297 RMPVTNFLSNKKNYVGIILG 316
>gi|308235111|ref|ZP_07665848.1| methionyl-tRNA formyltransferase [Gardnerella vaginalis ATCC 14018]
gi|311114678|ref|YP_003985899.1| methionyl-tRNA formyltransferase [Gardnerella vaginalis ATCC 14019]
gi|310946172|gb|ADP38876.1| methionyl-tRNA formyltransferase [Gardnerella vaginalis ATCC 14019]
Length = 326
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 97/321 (30%), Positives = 149/321 (46%), Gaps = 18/321 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALV--SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M L ++F GT E +VA L+AL + +V T+P P G RG K V SAV K A E
Sbjct: 1 MVLPILFAGTPEVSVAPLRALAQDKEHFDVRAVLTRPDAPTG-RGRKIVPSAVKKAAIEL 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYG-LVIPQRILNATKLGFYNGHASLLPRWR 117
+P L +EE + L V ++ Q +L+A LG+YN H SLLP+WR
Sbjct: 60 GIPVLEVNPSDEEECIRALKATGAKLAAVVAYGKILRQSVLDALPLGWYNLHFSLLPQWR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAP+QRAI AGD+ TG + K+ + +D GP+ I ++ L LS A
Sbjct: 120 GAAPVQRAIWAGDDITGATVFKITRGMDEGPILAQMTTEIGAHETAGDLLMRLSNDGADL 179
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ A+ +E + Q A+KI+ + + F A + IRA +P PGAW
Sbjct: 180 LCSALVGMESGQIIPVEQDPTPCQIAQKITVEDAHIRFDIPAFAIDRQIRACTPNPGAWC 239
Query: 238 EMMIGNKHERI---KLLESQLVE---------GEGKPGEVI--NPNFTIACSQGAVRIMR 283
+ + +I +L L + E KPG++ N + S G + ++
Sbjct: 240 NLHVDCGDLQIISLHVLSCALAKDEDISIHNLSELKPGQIFAGKRNVWVGSSSGVLELLE 299
Query: 284 LQRAGGRVLDIGDFLLGCPVI 304
++ G + + D+ G +
Sbjct: 300 VKAQGKKAMKAADWARGAHLS 320
>gi|16752391|ref|NP_444650.1| methionyl-tRNA formyltransferase [Chlamydophila pneumoniae AR39]
gi|7189032|gb|AAF37982.1| methionyl-tRNA formyltransferase [Chlamydophila pneumoniae AR39]
Length = 321
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 106/313 (33%), Positives = 166/313 (53%), Gaps = 9/313 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M L+VV+ GT FA LQ L+ I +V T+ +P +R + + S V A L
Sbjct: 1 MNLKVVYFGTPTFAATVLQDLLHHKIQITAVVTRVDKPQ-KRSAQLIPSPVKTIALTHGL 59
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P+K ++ + +FNADV +VVAYG ++ Q +L+ + G YN HA LLP +RGA
Sbjct: 60 PLLQPSKASDPQFIEELRAFNADVFIVVAYGAILRQIVLDIPRYGCYNLHAGLLPAYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQR IM G E+G +++MD +DTG +A + +VPI ++ + L L+ A ++
Sbjct: 120 APIQRCIMEGATESGNTVIRMDAGMDTGDMANITRVPIGPDMTSGELADALASQGAEVLI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++E L L Q T A K+SK E +V + + A+ + HIR ++P PGAW
Sbjct: 180 KTLQQIESGQLQLVSQDAALATIAPKLSKEEGQVPWDKPAKEAYAHIRGVTPAPGAWTLF 239
Query: 240 -MIGNKHERIKLLESQLVEGE---GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+R+ + ++ L+ G PG V+ +ACS+GA+ + +Q G
Sbjct: 240 SFSEKAPKRLMIRKASLLAEAGRYGAPGTVVVTDRQELAVACSEGAICLHEVQVEGKGST 299
Query: 293 DIGDFLLGCPVII 305
+ FL G P
Sbjct: 300 NSKSFLNGYPAKK 312
>gi|15618559|ref|NP_224845.1| methionyl-tRNA formyltransferase [Chlamydophila pneumoniae CWL029]
gi|15836181|ref|NP_300705.1| methionyl-tRNA formyltransferase [Chlamydophila pneumoniae J138]
gi|33242006|ref|NP_876947.1| methionyl-tRNA formyltransferase [Chlamydophila pneumoniae TW-183]
gi|6225375|sp|Q9Z7Q5|FMT_CHLPN RecName: Full=Methionyl-tRNA formyltransferase
gi|4376948|gb|AAD18788.1| Methionyl tRNA Formyltransferase [Chlamydophila pneumoniae CWL029]
gi|8979021|dbj|BAA98856.1| methionyl tRNA formyltransferase [Chlamydophila pneumoniae J138]
gi|33236516|gb|AAP98604.1| methionyl-tRNA formyltransferase [Chlamydophila pneumoniae TW-183]
Length = 321
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 107/313 (34%), Positives = 166/313 (53%), Gaps = 9/313 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M L+VV+ GT FA LQ L+ I +V T+ +P +R + + S V A L
Sbjct: 1 MNLKVVYFGTPTFAATVLQDLLHHKIQITAVVTRVDKPQ-KRSAQLIPSPVKTIALTHGL 59
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P+K ++ + +FNADV +VVAYG ++ Q +L+ + G YN HA LLP +RGA
Sbjct: 60 PLLQPSKASDPQFIEELRAFNADVFIVVAYGAILRQIVLDIPRYGCYNLHAGLLPAYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQR IM G E+G +++MD +DTG +A + +VPI ++ + L L+ A ++
Sbjct: 120 APIQRCIMEGATESGNTVIRMDAGMDTGDMANITRVPIGPDMTSGELADALASQGAEVLI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++E L L Q T A K+SK E +V + + A+ + HIR ++P PGAW
Sbjct: 180 KTLQQIESGQLQLVSQDAALATIAPKLSKEEGQVPWDKPAKEAYAHIRGVTPAPGAWTLF 239
Query: 240 -MIGNKHERIKLLESQLVEGE---GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+R+ + ++ L+ G PG V+ IACS+GA+ + +Q G
Sbjct: 240 SFSEKAPKRLMIRKASLLAEAGRYGAPGTVVVTDRQELAIACSEGAICLHEVQVEGKGST 299
Query: 293 DIGDFLLGCPVII 305
+ FL G P
Sbjct: 300 NSKSFLNGYPAKK 312
>gi|147670023|ref|YP_001214841.1| methionyl-tRNA formyltransferase [Dehalococcoides sp. BAV1]
gi|189044508|sp|A5FPB5|FMT_DEHSB RecName: Full=Methionyl-tRNA formyltransferase
gi|146270971|gb|ABQ17963.1| methionyl-tRNA formyltransferase [Dehalococcoides sp. BAV1]
Length = 315
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 101/314 (32%), Positives = 153/314 (48%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L++VFMG+ EFA+ L+ L++ + I VYTQP RPAG RG + V A E L
Sbjct: 7 LKIVFMGSPEFALTPLKMLLAEGYDICGVYTQPDRPAG-RGRELCPPPVKTLALEHGLAV 65
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L + E + FL DV VV AYGL++PQ +L+ G N H SLLPR+RGA P
Sbjct: 66 YQPQSLKKPEEQAFLKELKPDVIVVAAYGLILPQAVLDIPVYGVLNIHPSLLPRYRGATP 125
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ GD G+++MK++ LDTGPV V I T L +L+ + ++E
Sbjct: 126 VAATLLGGDEWAGVSLMKLEAGLDTGPVYSRSMVAIRPEDTTPILADKLAFIGGCMLLEL 185
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ P Q +Y ++K +N+ SA + +RA P+PG +
Sbjct: 186 LSQIPSLPEPQV-QDNTQASYFGMVTKEMGLINWQTSAVEIERRVRAFFPWPGVFTTF-- 242
Query: 242 GNKHERIKLLESQLVE--GEGKPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+LE++ KP EV + + G + I+RLQ G D
Sbjct: 243 --NQKTLKILEAKPRNLGLGLKPSEVRVYEQSRVMVGSASGELEIIRLQLEGKAGCSAAD 300
Query: 297 FLLGCPVIIGCIVG 310
F+ G G +G
Sbjct: 301 FVRGQRNFDGVNLG 314
>gi|331703449|ref|YP_004400136.1| methionyl tRNA formyltransferase [Mycoplasma mycoides subsp. capri
LC str. 95010]
gi|328802004|emb|CBW54158.1| Methionyl tRNA formyltransferase [Mycoplasma mycoides subsp. capri
LC str. 95010]
Length = 317
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 84/306 (27%), Positives = 151/306 (49%), Gaps = 15/306 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
++VVF GT + L+AL+ + +V V +QP +P G R + V + V K A E +L
Sbjct: 4 KIKVVFCGTPKIGADVLKALIEMNQVEVVLVISQPDKPIG-RKKQIVYTPVKKLALENNL 62
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
V + Y+ D + A+G IP +IL K N H SLLP+ RG A
Sbjct: 63 KV-VQPNKIGKIYDDLAKLEFDFLITCAFGQFIPTKILKLAKTDSINFHGSLLPKLRGGA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI GD +TGI IM+M K +D G + I + ++ L +++ L +
Sbjct: 122 PIQYAIKNGDKKTGITIMQMVKQMDAGDYYVQESIDILDSDDSGSLFEKMGQLAYSMCKK 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + L Q E+ +T+ + IS E ++N+ ++ ++ N IR+LSP P ++ +
Sbjct: 182 YLVDIYNHKFELIKQNEDEVTFCKNISSEEEKINWNNTSLDIFNLIRSLSPSPISYTTI- 240
Query: 241 IGNKHERIKLLESQLVEGEGK-----PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
++R K+ S++++ + + PG +I + A+ I+ +Q+ G +++
Sbjct: 241 ---NNQRYKIKSSKVIDLDNQNKNVMPGTIIDINKQGIVVKTLDKALLILEIQKEGKKMI 297
Query: 293 DIGDFL 298
++
Sbjct: 298 LASNYY 303
>gi|326693797|ref|ZP_08230802.1| methionyl-tRNA formyltransferase [Leuconostoc argentinum KCTC 3773]
Length = 322
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 104/318 (32%), Positives = 167/318 (52%), Gaps = 16/318 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT VVFMGT FAV L+AL++ + + +V TQP RP G R S V AQ
Sbjct: 1 MTYSVVFMGTPTFAVPILEALIADPQYDVKAVVTQPDRPQG-RKRMLTPSPVKVAAQAHD 59
Query: 60 LPALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP L P K+ +E Q ++ D + A+G +P +L+A ++ N HASLLP++RG
Sbjct: 60 LPVLQPEKMNGSDEMAQIVALAPDFIITAAFGQFLPTALLDAAQIAAVNTHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP+ AIM GD ETG++IM M K +D G V + KVPI++ N + +LS+ +
Sbjct: 120 GAPVHYAIMNGDTETGVSIMYMVKQMDAGDVIDVVKVPITAQDNVGTMFDKLSLAGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNF-CRSAENVHNHIRALSPFPGAWL 237
+ + K+ + Q E ++++ I++ + +NF +A+ + HIR L P A++
Sbjct: 180 LATLPKIAAGEIAPVSQDEAAVSFSPNITRDQQNLNFTQETAQQLDWHIRGLYPTHPAYV 239
Query: 238 EMMIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRV 291
++ +R+KL++ + + PG V+ TIA + + +RI +LQ AG V
Sbjct: 240 QVAG----QRVKLIQVTPLPETTDVAPGHVVARTKKMLTIAAADHSVLRIDQLQPAGKSV 295
Query: 292 LDIGDFLLGC--PVIIGC 307
+ +L G + G
Sbjct: 296 MSSQAYLNGAGSQLTSGD 313
>gi|162447191|ref|YP_001620323.1| methionyl-tRNA formyltransferase [Acholeplasma laidlawii PG-8A]
gi|161985298|gb|ABX80947.1| methionyl-tRNA formyltransferase [Acholeplasma laidlawii PG-8A]
Length = 304
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 80/299 (26%), Positives = 134/299 (44%), Gaps = 5/299 (1%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
+VFMGT EF+V L+ L+ + + V TQP R G R S V A ++
Sbjct: 2 IVFMGTPEFSVPILEMLIEEKYPVGLVVTQPDRFVG-RKKILTPSPVKSLALAHNIEVFQ 60
Query: 65 PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
P KL Q+ + + ++ + N H SLLP++RG APIQ
Sbjct: 61 PEKLRQDYQHIIDLKPSLIITASYGQILPK---ALLEAIPAINIHGSLLPKYRGGAPIQY 117
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
A+ GD++TGI +M+M +D G + +V I + L +LS+ + E +
Sbjct: 118 ALFNGDDKTGITLMEMVYKMDAGAMIKKVEVDIEPLDDYGTLSNKLSLAGRDLLKENLMS 177
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
+ +PQ E+ +T+A + + ++F +SA HN IR LSP GA +
Sbjct: 178 VLNKTYQSTPQNEDEVTFAFTLKYSDEALDFNKSASWNHNRIRGLSPNVGAHFNIKNTTV 237
Query: 245 HERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPV 303
+ + G+ + N I S A+ ++ LQ++G + + + D+L G +
Sbjct: 238 KVFKSAISDIIDIQRGEI-RIENKRIFIGTSDRAIELIELQQSGKKQMKVKDYLNGQSL 295
>gi|152990973|ref|YP_001356695.1| methionyl-tRNA formyltransferase [Nitratiruptor sp. SB155-2]
gi|259646043|sp|A6Q4C9|FMT_NITSB RecName: Full=Methionyl-tRNA formyltransferase
gi|151422834|dbj|BAF70338.1| methionyl-tRNA formyltransferase [Nitratiruptor sp. SB155-2]
Length = 302
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 82/309 (26%), Positives = 138/309 (44%), Gaps = 10/309 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS--L 60
+R+VFMGT ++A L+ L+ +V V+TQP +P G R V K E + +
Sbjct: 1 MRIVFMGTPDYATTILEGLLE-KFEVVGVFTQPDKPVG-RKQVVTPPHVKKFLIEKNVDI 58
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P P+ L EE + L A +VVA I + + N HASLLP++RGA+
Sbjct: 59 PIFQPSTLKSEEVYEQLHTLAPDFIVVAAYGQILPKEILQLA-PCINLHASLLPKYRGAS 117
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ GD TG+ M MD+ LDTG + + I ++ N L ++LS L +
Sbjct: 118 PIQHALLNGDTVTGVTAMLMDEGLDTGDILAYDVIDIQNSDNAITLFEKLSHLAKELTPK 177
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ E ++ + G+ R + + N + + +
Sbjct: 178 VLQSFENIAPIAQHDVDASYCKKIRKQDGQIRFSDAKVIWNKYRAFIVWPG-----IFLE 232
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
G K + I L+E+ EGK E+ + + C +G++ I +Q + ++ +L G
Sbjct: 233 NGLKLKEIDLVETDNTHEEGKILEISDAGVVVGCRRGSICIKSVQPPSKKAMEAVAYLRG 292
Query: 301 CPVIIGCIV 309
+ +G
Sbjct: 293 KRLKVGDTF 301
>gi|219683643|ref|YP_002470026.1| methionyl-tRNA formyltransferase [Bifidobacterium animalis subsp.
lactis AD011]
gi|254789338|sp|B8DTX1|FMT_BIFA0 RecName: Full=Methionyl-tRNA formyltransferase
gi|219621293|gb|ACL29450.1| methionyl-tRNA formyltransferase [Bifidobacterium animalis subsp.
lactis AD011]
gi|289178413|gb|ADC85659.1| Methionyl-tRNA formyltransferase [Bifidobacterium animalis subsp.
lactis BB-12]
Length = 321
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 96/320 (30%), Positives = 148/320 (46%), Gaps = 14/320 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVS--SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
LRV+F GT E AV +L+ L +V+V T+P P G RG K + S V A+E L
Sbjct: 2 LRVLFAGTPEVAVPSLRMLAKDTEHFEVVAVLTRPDAPTG-RGRKIMPSPVKMAARELGL 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ + + A A VVAYG ++ + +L A LG+YN H SLLP+WRGAA
Sbjct: 61 DVIECDPADECFLSALKATGAQCAAVVAYGKILRESVLEALPLGWYNLHFSLLPQWRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRAI AGD TG ++ ++ +D GPV V I ++ N L L+ A +
Sbjct: 121 PVQRAIWAGDEVTGCSVFRITAGMDRGPVLGQSTVTIGAHENAGELLDRLAEDGAGLLAA 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L++ + Q A KI+ + + F A + IRA +P PGAW +
Sbjct: 181 SLQALDEGVVNAVDQPAGSYDVAAKITTQDAHMRFDVPAFALDRQIRACTPAPGAWANLH 240
Query: 241 IGNKHERIKLLESQLVEG---------EGKPGE--VINPNFTIACSQGAVRIMRLQRAGG 289
L S+ + KPGE V + + S + ++ ++ AG
Sbjct: 241 PHGDDANETLHVSKAIPADMTADESPRNLKPGELHVTKHHVWVGTSTDPLELLVVKAAGK 300
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
R + ++ G + G +
Sbjct: 301 REMGAPEWARGAHLAEGAYL 320
>gi|294338536|emb|CAZ86865.1| Methionyl-tRNA formyltransferase [Thiomonas sp. 3As]
Length = 331
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 119/310 (38%), Positives = 168/310 (54%), Gaps = 14/310 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LRV F GT EFA L+A++S+ +++ V TQP RPAG RG+K S V + A +
Sbjct: 14 LRVAFAGTPEFAAVALRAILSAGYTVPLVLTQPDRPAG-RGMKLQSSPVKQVASAAQIEV 72
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ + + + + ADV VV AYGL++P +L +LG N H SLL
Sbjct: 73 IQPQGLRLDGRYAEQAAQAHAALRAAQADVLVVAAYGLILPTSVLTLPRLGCLNIHGSLL 132
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPIQRAI AGD +TGI +M+MD LDTG + + +PI S + L +L+VL
Sbjct: 133 PRWRGAAPIQRAIEAGDAQTGITLMQMDAGLDTGDMLLEQALPIESTDTASTLHDKLAVL 192
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A +V+ +D LE+ L PQ E G+TYA KISK E+ + + AE + +RA +P+P
Sbjct: 193 GAALVVQGLDALERGELRPRPQPEAGVTYAAKISKDESLLQWDLPAELLARRVRAFTPWP 252
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEV---INPNFTIACSQGAVRIMRLQRAGGR 290
G + G + E+ G PG V + C G +RI RLQ+ GG
Sbjct: 253 GTQFTLPDGGVVKVG-AAEALTAPHVGPPGLVRQMTAEGLDVVCGSGVLRITRLQKPGGT 311
Query: 291 VLDIGDFLLG 300
+ + +L G
Sbjct: 312 MQSVAQWLQG 321
>gi|254459111|ref|ZP_05072534.1| methionyl-tRNA formyltransferase [Campylobacterales bacterium GD 1]
gi|207084382|gb|EDZ61671.1| methionyl-tRNA formyltransferase [Campylobacterales bacterium GD 1]
Length = 302
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 91/304 (29%), Positives = 156/304 (51%), Gaps = 10/304 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R++FMGT ++A A L+ +++ + +V+VYTQP +P G R V AQ+ +
Sbjct: 1 MRIIFMGTPDYAEAILERIINTADMEVVAVYTQPDKPVG-RKKVITPPVVKTLAQKHGIA 59
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E E+ L D VV AYG ++P IL N HAS+LP++RGA+
Sbjct: 60 VYQPNRLRDSETVEELLKIEVDYIVVAAYGQILPLEILQHA--PCINLHASILPQYRGAS 117
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ+ ++ GD +TG+ M MD LDTG + + ++ +S + L L+ + ++
Sbjct: 118 PIQQTLLNGDKKTGVTAMLMDVGLDTGDILKIDEIDVSDDEMVETLFDRLTTTASELTID 177
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ N+ Q E+ T+ KISK + V+F + ++N RA +P+P + +
Sbjct: 178 ILKN--FNSYEPVKQDESLATHCAKISKHDGEVSFTDAT-ELYNKYRAFTPWPAIY--LE 232
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
G K + IKL E GK + + + C +G++RI ++Q A + +DI ++ G
Sbjct: 233 SGLKLKSIKLEEKISNNENGKILLIDKDSIVVGCEKGSIRIFKIQPASKKEMDILSYING 292
Query: 301 CPVI 304
+
Sbjct: 293 KRLT 296
>gi|83319576|ref|YP_424492.1| methionyl-tRNA formyltransferase [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
gi|123740044|sp|Q2SRX1|FMT_MYCCT RecName: Full=Methionyl-tRNA formyltransferase
gi|83283462|gb|ABC01394.1| methionyl-tRNA formyltransferase [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
Length = 317
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 82/302 (27%), Positives = 144/302 (47%), Gaps = 7/302 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
++VVF GT + L+AL+ + +V V +QP +P G R + V + V K A E +L
Sbjct: 4 KIKVVFCGTPKIGADVLKALIEMNEVEVVLVISQPDKPIG-RKKQIVYTPVKKLALENNL 62
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
V E Y+ D + A+G IP +IL K N H SLLP+ RG A
Sbjct: 63 KV-VQPNKIGEIYDDLAKLEFDFLITCAFGQFIPTKILKLAKTDSINFHGSLLPKLRGGA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI GD +TGI IM+M K +D G + I + ++ L +++ L +
Sbjct: 122 PIQYAIKNGDKKTGITIMQMVKQMDAGDYYVQESIDILDSDDSGSLFEKMGQLAYSMCKK 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + L Q EN +T+ + IS E ++++ ++ ++ N IR+LSP P ++ +
Sbjct: 182 YLVDIYNHKFELIKQNENEVTFCKNISSEEEKIDWNNTSLDIFNLIRSLSPSPISYTTIN 241
Query: 241 IGNKHERI-KLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ K++ PG +I+ + ++ I+ +Q+ G +++ +
Sbjct: 242 SQRYKIKSSKIINLDNQNKNVAPGTIIDINRQGIVVKTLDSSLLILEIQKEGKKMILASN 301
Query: 297 FL 298
+
Sbjct: 302 YY 303
>gi|25028275|ref|NP_738329.1| methionyl-tRNA formyltransferase [Corynebacterium efficiens YS-314]
gi|259507333|ref|ZP_05750233.1| methionyl-tRNA formyltransferase [Corynebacterium efficiens YS-314]
gi|33516870|sp|Q8FT52|FMT_COREF RecName: Full=Methionyl-tRNA formyltransferase
gi|23493559|dbj|BAC18529.1| putative methionyl-tRNA formyltransferase [Corynebacterium
efficiens YS-314]
gi|259165044|gb|EEW49598.1| methionyl-tRNA formyltransferase [Corynebacterium efficiens YS-314]
Length = 315
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 96/310 (30%), Positives = 145/310 (46%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT E AV LQ L+ S H +V+V TQP G RG SAV + AQ +
Sbjct: 1 MRLVFAGTPEPAVVALQKLIDSEHEVVAVLTQPDARRG-RGRTLHPSAVAELAQAHGIEV 59
Query: 63 LVPTKLGQEE------YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ PT L + ++ D VVA+G +I + +L+ G+ N H SLLP W
Sbjct: 60 IKPTSLKADTGDGRLVRQRLAELQPDCLPVVAFGQLITRDLLDVAPHGWVNLHFSLLPAW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAP+Q AI AGD TG ++D+ LDTG + + I L L+ A
Sbjct: 120 RGAAPVQAAIRAGDQLTGATCFRIDEGLDTGVILSTLEETIQPTDTADDLLTRLAYAGAD 179
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+V+ M LE + Q TYA KI+ + R+++ AE + HIRA +P PGAW
Sbjct: 180 LLVDTMTGLEAGTISPREQTGE-ATYAPKITTVDARIDWTVPAEVIDRHIRAHTPGPGAW 238
Query: 237 LEMMIGNKHERIKLLESQLVE-GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + + L + PG + + V + ++Q G ++++
Sbjct: 239 TMLDDARLKVGPLVTVTDLPDVPTLNPGALHATRDAVYVGTGSTPVALGQIQPPGKKMMN 298
Query: 294 IGDFLLGCPV 303
D+ G +
Sbjct: 299 AADWARGVHL 308
>gi|73749414|ref|YP_308653.1| methionyl-tRNA formyltransferase [Dehalococcoides sp. CBDB1]
gi|123746196|sp|Q3ZZW0|FMT_DEHSC RecName: Full=Methionyl-tRNA formyltransferase
gi|73661130|emb|CAI83737.1| methionyl-tRNA formyltransferase [Dehalococcoides sp. CBDB1]
Length = 312
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 101/314 (32%), Positives = 153/314 (48%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L++VFMG+ EFA+ L+ L++ + I VYTQP RPAG RG + V A E L
Sbjct: 4 LKIVFMGSPEFALTPLKMLLAEGYDICGVYTQPDRPAG-RGRELCPPPVKTLALEHGLAV 62
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L + E + FL DV VV AYGL++PQ +L+ G N H SLLPR+RGA P
Sbjct: 63 YQPQSLKKPEEQAFLKELKPDVIVVAAYGLILPQAVLDIPVYGVLNIHPSLLPRYRGATP 122
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ GD G+++MK++ LDTGPV V I T L +L+ + ++E
Sbjct: 123 VAATLLGGDEWAGVSLMKLEAGLDTGPVYSRSMVAIRPEDTTPILADKLAFIGGCMLLEL 182
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ P Q +Y ++K +N+ SA + +RA P+PG +
Sbjct: 183 LSQIPSLPEPKV-QDNTQASYFGMVTKEMGLINWQTSAVEIERRVRAFFPWPGVFTTF-- 239
Query: 242 GNKHERIKLLESQLVE--GEGKPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+LE++ KP EV + + G + I+RLQ G D
Sbjct: 240 --NQKTLKILEAKPRNLGLGLKPSEVRVYEQSRVMVGSASGELEIIRLQLEGKAGCSAAD 297
Query: 297 FLLGCPVIIGCIVG 310
F+ G G +G
Sbjct: 298 FVRGQRNFDGVNLG 311
>gi|15835431|ref|NP_297190.1| methionyl-tRNA formyltransferase [Chlamydia muridarum Nigg]
gi|13626746|sp|Q9PJL2|FMT_CHLMU RecName: Full=Methionyl-tRNA formyltransferase
gi|7190845|gb|AAF39619.1| methionyl-tRNA formyltransferase [Chlamydia muridarum Nigg]
Length = 316
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 105/305 (34%), Positives = 165/305 (54%), Gaps = 8/305 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LRVV++GT +FA L+ LV + +V V T+ +P +R K + S V + A ++P
Sbjct: 4 LRVVYLGTPQFAATVLETLVDARIHVVGVVTRADKPQ-KRSSKPIASPVKQLALSKNIPL 62
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L PTK + Q + ADV VVVAYG+++ Q +L+ K G YN HA LLP +RGAAP
Sbjct: 63 LQPTKTTDPAFLAQLREWQADVFVVVAYGVILKQELLDIPKYGCYNLHAGLLPAYRGAAP 122
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQR I+AG+ +G +++MD +DTG +A + V I ++ L + L+ +++
Sbjct: 123 IQRCIIAGETLSGNTVIRMDAGMDTGDIANVNHVAIGEDMTAGELAEALAGSGGELILKT 182
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++E + PQ T A K++K E V + A V+ HIR +SP PGAW +
Sbjct: 183 LQEIEAGTVRHIPQDSAKATLAPKLTKEEGLVKWDAPASQVYAHIRGVSPAPGAWTRFLS 242
Query: 242 G-NKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ R+ +L +++ G PGEV+ + +AC QG +R+ +Q G +
Sbjct: 243 QGKEPRRLGILSARMESSSGSHSPGEVLGVSGEDLLVACRQGVLRLCIVQPEGKVFMKAK 302
Query: 296 DFLLG 300
DF G
Sbjct: 303 DFFNG 307
>gi|326382169|ref|ZP_08203861.1| methionyl-tRNA formyltransferase [Gordonia neofelifaecis NRRL
B-59395]
gi|326198899|gb|EGD56081.1| methionyl-tRNA formyltransferase [Gordonia neofelifaecis NRRL
B-59395]
Length = 313
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 108/311 (34%), Positives = 157/311 (50%), Gaps = 15/311 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E AV TLQ L+ S H +V V T+P AG RG + V S V A E +
Sbjct: 1 MRLVFAGTPEVAVPTLQELLDSPDHEVVGVVTRPDTTAG-RGRRVVRSEVGTLADERGIE 59
Query: 62 ALVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P ++ E + LS +N D+ VVVAYG +IPQ +L+ G+ N H S+LP WRGAA
Sbjct: 60 VITPGRMSDPEVAEALSRWNPDLGVVVAYGGLIPQSVLDLLPHGWVNLHFSVLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG ++ +++ LDTGPV I L L+V A +
Sbjct: 120 PVQAAIAAGDEITGASVFELEAGLDTGPVYGTLTERIRGTDTAGDLLARLAVSGAGLLRA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D ++ L PQ +G+++A KI+ + RV + + + IRA +P PGAW +
Sbjct: 180 VVDGIQAGELAPVPQDADGVSHAAKITSDDARVRWDLPSHIIDRTIRAHTPAPGAWTTLG 239
Query: 241 IGNKHERIKLLESQLVEGEGK------PGE--VINPNFTIACSQGAVRIMRLQRAGGRVL 292
RIKL +G+ PG V + GAVR+ +Q G + +
Sbjct: 240 DA----RIKLGPVTPADGDDLVPSGLGPGALGVTKKAVFVGTGSGAVRLSTVQAPGKKSM 295
Query: 293 DIGDFLLGCPV 303
+ D+ G
Sbjct: 296 NAADWARGSRF 306
>gi|311113845|ref|YP_003985067.1| methionyl-tRNA formyltransferase [Rothia dentocariosa ATCC 17931]
gi|310945339|gb|ADP41633.1| methionyl-tRNA formyltransferase [Rothia dentocariosa ATCC 17931]
Length = 313
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 96/315 (30%), Positives = 157/315 (49%), Gaps = 12/315 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MTL++++ GT E AV L ALV S +V V T+ P G R S V ++A+E
Sbjct: 1 MTLKILYAGTPEIAVHPLDALVQSPRVQVVGVLTREDAPVG-RKRILTPSPVAQRAEELG 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP + + E +Q A+ A VVAYG ++PQ L+ G+ N H S LP WRGA
Sbjct: 60 LPIVKANRWLPETQQQIAPLGAEAAAVVAYGTILPQHALDMLPYGWVNLHFSKLPAWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+QRA+MAG+NE ++ LDTG V ++ + + L+ +
Sbjct: 120 APVQRALMAGENEIFSNTFLLEAGLDTGAVFEEESTLVTEDDTAGSILTRLAQSGGELLA 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+LE + + + ++YA K++ + R++F +SA + +RA++P PGAW E
Sbjct: 180 NTFVRLEAGEPGTAQREDKSVSYAAKVTNADARIDFTQSAHKILAQVRAVTPEPGAWCEF 239
Query: 240 MIGNKHERIKLLESQLVEGEGK--PG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
R+K+ +L + G PG E+ + + GA+ ++R+Q AG +++D
Sbjct: 240 SGN----RLKIGGVRLSDQAGTLAPGQLELRGKKLYVGTADGALELVRVQPAGKKMMDAL 295
Query: 296 DFLL--GCPVIIGCI 308
+ G + G +
Sbjct: 296 AWARGLGSNLAEGKV 310
>gi|300741741|ref|ZP_07071762.1| methionyl-tRNA formyltransferase [Rothia dentocariosa M567]
gi|300380926|gb|EFJ77488.1| methionyl-tRNA formyltransferase [Rothia dentocariosa M567]
Length = 313
Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 96/315 (30%), Positives = 158/315 (50%), Gaps = 12/315 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MTL++++ GT E AV L ALV S +V V T+ P G R S V ++A+E
Sbjct: 1 MTLKILYAGTPEIAVHPLDALVQSPWVQVVGVLTREDAPVG-RKRILTPSPVAQRAEELG 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP + + E +Q A+ A VVAYG ++PQ+ L+ G+ N H S LP WRGA
Sbjct: 60 LPIVKANRWLPETQQQIAPLGAEAAAVVAYGAILPQQALDMLPYGWVNLHFSKLPAWRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+QRA+MAG+NE ++ LDTG V ++ + + L+ +
Sbjct: 120 APVQRALMAGENEIFSNTFLLEAGLDTGAVFEEESTLVTEDDTAGSILTRLAQSGGELLA 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+LE + + + ++YA K++ + R++F +SA + +RA++P PGAW E
Sbjct: 180 NTFVRLEAGEHGTAQREDESVSYAAKVTNADARIDFTQSAHKILAQVRAVTPEPGAWCEF 239
Query: 240 MIGNKHERIKLLESQLVEGEGK--PG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
R+K+ +L + G PG E+ + + GA+ ++R+Q AG +++D
Sbjct: 240 SGS----RLKIGGVRLSDQSGTLTPGQLELRGKKLYVGTADGALELVRVQPAGKKMMDAL 295
Query: 296 DFLL--GCPVIIGCI 308
+ G + G +
Sbjct: 296 AWARGLGSGLAEGKV 310
>gi|227875403|ref|ZP_03993544.1| methionyl-tRNA formyltransferase [Mobiluncus mulieris ATCC 35243]
gi|306818716|ref|ZP_07452438.1| methionyl-tRNA formyltransferase [Mobiluncus mulieris ATCC 35239]
gi|307701078|ref|ZP_07638103.1| methionyl-tRNA formyltransferase [Mobiluncus mulieris FB024-16]
gi|227843957|gb|EEJ54125.1| methionyl-tRNA formyltransferase [Mobiluncus mulieris ATCC 35243]
gi|304648402|gb|EFM45705.1| methionyl-tRNA formyltransferase [Mobiluncus mulieris ATCC 35239]
gi|307614073|gb|EFN93317.1| methionyl-tRNA formyltransferase [Mobiluncus mulieris FB024-16]
Length = 333
Score = 146 bits (367), Expect = 6e-33, Method: Composition-based stats.
Identities = 100/313 (31%), Positives = 159/313 (50%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F G+ A+ TL+ LV SSH +V V ++P P G RG K SAV + AQE LP
Sbjct: 1 MRIIFAGSPAPALPTLEYLVDSSHEVVGVLSRPDAPRG-RGRKLQASAVAQYAQEHHLPL 59
Query: 63 LVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K + + D+ VVVAYG ++P IL + G+ N H SLLPRWRGAA
Sbjct: 60 YQPRSLKNDSTIATILRNLSPDLGVVVAYGAILPLEILKIPRYGWINLHFSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRA+ AGD ETG+ + ++ LDTG + + I N + + ++LS L +
Sbjct: 120 PVQRAVQAGDTETGVTVFNLEPTLDTGSIYAKLRYNIPPNASAGEVLEDLSELAISPLEI 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++DK+ P PQ + GI+YA ++S E ++++ +++E + HIR +P PGAW +
Sbjct: 180 SLDKIV-AGTPPDPQAQIGISYAPQLSVAEGQIDWTQNSEAISAHIRGFTPNPGAWTILS 238
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ++ E PG++ + V + + AG + + D
Sbjct: 239 GLRFKIGVLASGAEFPRQAMELAPGQIFPTRQGVWVGTGSTPVCLGTIAPAGKKHMPAVD 298
Query: 297 FLLGCPVIIGCIV 309
+ G + G
Sbjct: 299 WARGARLEFGMNF 311
>gi|118617417|ref|YP_905749.1| methionyl-tRNA formyltransferase [Mycobacterium ulcerans Agy99]
gi|166215487|sp|A0PPK9|FMT_MYCUA RecName: Full=Methionyl-tRNA formyltransferase
gi|118569527|gb|ABL04278.1| methionyl-tRNA formyltransferase Fmt [Mycobacterium ulcerans Agy99]
Length = 312
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 93/308 (30%), Positives = 146/308 (47%), Gaps = 6/308 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+ L L+ S H +++V T+P +GRRG K S V + A E +P
Sbjct: 1 MRLVFAGTPETALPALHQLIDSPRHDVIAVLTRPDAASGRRG-KPEPSPVARAALERGIP 59
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGL-VIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P++ E+ LS A V ++ +L G+ N H SLLP WRGAA
Sbjct: 60 VLRPSRPNSAEFVAELSELAPQCCAVVAYGALLGDALLGVPPQGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG +++ LD+GPV + I L L+V A +
Sbjct: 120 PVQAAIAAGDAVTGATTFQIEPSLDSGPVYGVVTETIRPTDTAGDLLGRLAVSGAELLSA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + + L PQ +G+T A KIS + RV + + IRA++P PGAW +
Sbjct: 180 TLDGIAEGALTARPQPADGVTLAPKISVEQARVRWELPVPIIERRIRAVTPNPGAWTLIG 239
Query: 241 IGNKHERIKLLESQLVE-GEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
L++ + G PG +V + + +R+ ++Q G ++++ D+
Sbjct: 240 DLRVKLGPVYLDAAVEPPGPLPPGAIQVDRKHVWVGTGSEPLRLGQVQPPGKKLMNAADW 299
Query: 298 LLGCPVII 305
G +
Sbjct: 300 ARGARLDP 307
>gi|78777609|ref|YP_393924.1| methionyl-tRNA formyltransferase [Sulfurimonas denitrificans DSM
1251]
gi|123768606|sp|Q30QP2|FMT_SULDN RecName: Full=Methionyl-tRNA formyltransferase
gi|78498149|gb|ABB44689.1| methionyl-tRNA formyltransferase [Sulfurimonas denitrificans DSM
1251]
Length = 302
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 79/309 (25%), Positives = 162/309 (52%), Gaps = 10/309 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMGT ++A L+ L++ + +V++YTQP +P G R A A ++ +
Sbjct: 1 MKIIFMGTPDYAAHILEKLLNTKNIEVVALYTQPDKPVG-RKKILTPPAAKNIALKYGIA 59
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P++ +E + S D VV AYG ++P IL N HAS+LP +RGA+
Sbjct: 60 ISQPSRLRDKETVAEVTSIECDYIVVAAYGQILPLEILKHA--PCINLHASILPHYRGAS 117
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ+ ++ GD +TG+ M M++ LDTG + ++++ + ++ + L L+ + + ++
Sbjct: 118 PIQQTLLHGDVKTGVTAMLMNEGLDTGDILKIKEIEVDADEMSESLFSRLTEVASDLTID 177
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ Q + Q ++ ++ +KI+K + V F +A + N RA +P+PG + +
Sbjct: 178 VLENFVQYTPKI--QDDSLSSHCKKITKQDGEVEF-DNATAIFNKYRAFTPWPGIY--LT 232
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
G K ++I+L E + G+ ++ + + C +G+++++ LQ + ++ G
Sbjct: 233 SGLKLKKIELFEKESQNESGRILDIQKDSIIVGCKKGSIKVITLQPESKNEMSALSYING 292
Query: 301 CPVIIGCIV 309
+ I +
Sbjct: 293 KRLNIADTL 301
>gi|187735473|ref|YP_001877585.1| methionyl-tRNA formyltransferase [Akkermansia muciniphila ATCC
BAA-835]
gi|229487436|sp|B2UQR9|FMT_AKKM8 RecName: Full=Methionyl-tRNA formyltransferase
gi|187425525|gb|ACD04804.1| methionyl-tRNA formyltransferase [Akkermansia muciniphila ATCC
BAA-835]
Length = 314
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 100/307 (32%), Positives = 156/307 (50%), Gaps = 9/307 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT + A+ ++L+ S + + TQP RP G R A+ A+E +P
Sbjct: 1 MRIVFMGTGDIAIPAFRSLIRHS-DLAGLVTQPDRPVG-RHQVLTAPAIKNIAREAGIPV 58
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P L + L N D+ VV+AYG ++ Q +++ +G N HASLLPR RGAA
Sbjct: 59 LQPHSLRSPDALSNLRRLNPDLIVVMAYGQILSQEVIDMAPMGCINAHASLLPRHRGAAC 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ AI +GD ETGI IM + + LD G + P+ + L +L+ + ++
Sbjct: 119 IQSAIKSGDAETGITIMHIVRKLDAGDIIAQISTPLEGSETGGTLHDKLARMTPDVLLPV 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ Q E TYA K+ + + ++++ R AE + IRA P+PG +
Sbjct: 179 IHSIEKGTATRIRQQEILATYAPKLLRADGKIDWTRPAEEIGRMIRAYDPWPGTFTNYWN 238
Query: 242 GNKHER-IKLLE--SQLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIG 295
K R +K+ S L E EGKPG+V++ IAC G + + +Q G ++I
Sbjct: 239 RKKRIRNMKIFPGFSILPEAEGKPGQVLSAGEQGLLIACGSGGLLVTDVQLEGSTRMNIS 298
Query: 296 DFLLGCP 302
+ G P
Sbjct: 299 QLIAGHP 305
>gi|257066167|ref|YP_003152423.1| methionyl-tRNA formyltransferase [Anaerococcus prevotii DSM 20548]
gi|256798047|gb|ACV28702.1| methionyl-tRNA formyltransferase [Anaerococcus prevotii DSM 20548]
Length = 312
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 83/310 (26%), Positives = 154/310 (49%), Gaps = 13/310 (4%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ + FMG +FAV L L + + V + P + RR K + + K AQ+ +
Sbjct: 2 INICFMGNPKFAVRALDVLYNDENIDVKLVVSSPDKKRNRR--KVTPTEIKKYAQDKGID 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E+ + L D VVVA+G +I + +L A + N H S+LP +RGA+
Sbjct: 60 VQTPKTVNSPEFVEELKALEIDYIVVVAFGQLIGKDLLEAYEDRIINLHPSILPAYRGAS 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q +++ GD T M ++K +D+G + ++VPI + + L+++LS + A + E
Sbjct: 120 PMQFSLLNGDKLTAATTMLIEKGMDSGDILIQKEVPIEESDDYTSLEEKLSEIGAEKIRE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ Q ++ ++ KI+K R+++ +++ + N IRA +P A+
Sbjct: 180 TILNFDEVYKNRQKQDDSKASFCTKITKDMGRIDWNKNSSEIINKIRAFVEYPVAFFAYE 239
Query: 241 IGNKHERIKLLESQLVEG-EGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
N +K+ ++++ +G EG+PG V I GA+RI ++Q G + +D
Sbjct: 240 GSN----VKVYKAEIAQGYEGRPGFVYEANPKEKIVIGTKDGAIRIEKIQFPGKKAMDTK 295
Query: 296 DFLLGCPVII 305
FL+G
Sbjct: 296 SFLMGNSFEE 305
>gi|255994859|ref|ZP_05427994.1| methionyl-tRNA formyltransferase [Eubacterium saphenum ATCC 49989]
gi|255993572|gb|EEU03661.1| methionyl-tRNA formyltransferase [Eubacterium saphenum ATCC 49989]
Length = 315
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 100/316 (31%), Positives = 161/316 (50%), Gaps = 17/316 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VVFMG+ +FAV +L AL + I TQ + K + +AV ++A + +
Sbjct: 1 MKVVFMGSPDFAVPSLDALHKAGVDIPFCITQKDAVSRN---KRIPTAVKRRASDLGIEV 57
Query: 63 LVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + ++ E+ + D VV A+G +I + IL K+ N HASLLP++RGAA
Sbjct: 58 YEPDIINKDRGLIEKMKLESPDFLVVAAFGQIISKEILEIPKIAAINLHASLLPKYRGAA 117
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA++ G ETG+ IMKM + LD+G + + ++ ++ +
Sbjct: 118 PIQRAVLEGAEETGVTIMKMAEGLDSGDMISFYTTEVGEKTSSELFEELAKEGAKLLLET 177
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
D +N L PQ E +YA K+SK E R++F SA +RA S PGA+ +
Sbjct: 178 LCDI-LKNGLKAEPQNEADASYAAKVSKAEGRIDFNNSAIVEARRVRAFSRVPGAFAFLN 236
Query: 241 IGNKHERIKLLESQLVEGEG-KPGEVI------NPNFTIACSQGAVRIMRLQRAGGRVLD 293
RIK++ ++ V+ + PGEV+ + + C++GA+ I +LQR+G + +
Sbjct: 237 GD----RIKVVRARAVDAKSNAPGEVLRITQGDDCEIVVGCAEGALAISKLQRSGKKEMG 292
Query: 294 IGDFLLGCPVIIGCIV 309
DFL G + G I
Sbjct: 293 AADFLKGVHLTPGDIF 308
>gi|254672815|emb|CBA06956.1| Methionyl-tRNA formyltransferase [Neisseria meningitidis alpha275]
Length = 308
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 112/291 (38%), Positives = 155/291 (53%), Gaps = 11/291 (3%)
Query: 25 SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEY--EQFLSFNAD 82
I V TQP RP G RG++ V + A E L P KL + AD
Sbjct: 23 GFEIPLVLTQPDRPKG-RGMQLTAPPVKQAALELGLRVAQPEKLRNNAEALQMLKEVEAD 81
Query: 83 VAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDK 142
V VV AYGL++PQ +L+ K G N HASLLPRWRGAAPIQRAI AGD ETG+ IM+MD
Sbjct: 82 VMVVAAYGLILPQEVLDTPKHGCLNIHASLLPRWRGAAPIQRAIEAGDAETGVCIMQMDI 141
Query: 143 HLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNL-PLSPQIENGIT 201
LDTG V + I + L + A A+V + +L+ Q E G+T
Sbjct: 142 GLDTGDVVSEHRYAIQPTDTANEVHDALMEIGAAAVVADLQQLQSKGRLNAVKQPEEGVT 201
Query: 202 YAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGK 261
YA+K+SK E R+++ SA + IRA +P P AW+E + +K+ +++V +G
Sbjct: 202 YAQKLSKEEARIDWSESAAVIERKIRAFNPVPAAWVEYQG----KPMKIRRAEVVAQQGA 257
Query: 262 PGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
GEV++ +AC + A++I LQ AGGR ++I F G + G +
Sbjct: 258 AGEVLSCSADGLVVACGENALKITELQPAGGRRMNIAAFAAGRHIEAGTKL 308
>gi|300361952|ref|ZP_07058129.1| methionyl-tRNA formyltransferase [Lactobacillus gasseri JV-V03]
gi|300354571|gb|EFJ70442.1| methionyl-tRNA formyltransferase [Lactobacillus gasseri JV-V03]
Length = 314
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 95/313 (30%), Positives = 164/313 (52%), Gaps = 13/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT F LQ L+ + + +V TQP + G R SAV + A + +LP
Sbjct: 4 VIFLGTPNFGSVVLQGLIDQGYDVKAVVTQPDKRVG-RKQVVHQSAVKQTALKHNLPVYQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G +E + + D V AYG +P + L + K+ N H SLLP++RG APIQ
Sbjct: 63 PAKLSGSDELAELMKIEPDFIVTAAYGQFLPTKFLKSAKIAPVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETGI IM+M K +D G + + +PI ++ + L +LS+L ++E +
Sbjct: 123 YSVLNGDKETGITIMEMVKKMDAGDIFSQKALPIEADDTSGTLFDKLSILGRDLLLETLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K + +PQ E + ++ ISK + ++ +AE +N IRAL+P PGA+L +
Sbjct: 183 KFIDGTITRTPQNEAKVVFSPNISKEQEQIKLSMTAEQANNLIRALNPDPGAYLML---- 238
Query: 244 KHERIKLLESQLV--EGEGKPGEVI--NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFL 298
+R K+ +++ + + G ++ F I+ + G+ + ++ +Q G + ++I D+L
Sbjct: 239 DGKRFKIWKAKPLAEKTSFPAGTLVTNKKRFVISMANGSELELLEVQPTGKKKMNIKDYL 298
Query: 299 L--GCPVIIGCIV 309
G G +
Sbjct: 299 NGQGSHFTSGEKI 311
>gi|116629418|ref|YP_814590.1| methionyl-tRNA formyltransferase [Lactobacillus gasseri ATCC 33323]
gi|282850878|ref|ZP_06260252.1| methionyl-tRNA formyltransferase [Lactobacillus gasseri 224-1]
gi|122273644|sp|Q044H0|FMT_LACGA RecName: Full=Methionyl-tRNA formyltransferase
gi|116095000|gb|ABJ60152.1| methionyl-tRNA formyltransferase [Lactobacillus gasseri ATCC 33323]
gi|282557830|gb|EFB63418.1| methionyl-tRNA formyltransferase [Lactobacillus gasseri 224-1]
Length = 314
Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats.
Identities = 93/313 (29%), Positives = 164/313 (52%), Gaps = 13/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT F LQ L+ + + +V TQP + G R SAV + A + +LP
Sbjct: 4 VIFLGTPNFGSVVLQGLIDQGYDVKAVVTQPDKRVG-RKQVVHQSAVKQTALKHNLPVYQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G +E + + D V AYG +P + L + K+ N H SLLP++RG APIQ
Sbjct: 63 PAKLSGSDELAELMKIEPDFIVTAAYGQFLPTKFLKSAKIAPVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETG+ IM+M K +D G + + +PI + + L +LS+L ++E +
Sbjct: 123 YSVLNGDKETGVTIMEMVKKMDAGDIFSQKALPIEDDDTSGTLFDKLSILGRDLLLETLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K + +PQ E+ + ++ ISK + ++ +AE +N IRAL+P PGA++ +
Sbjct: 183 KFIDGTVTRTPQNEDKVVFSPNISKEQEQIKLTMTAEQANNLIRALNPDPGAYVML---- 238
Query: 244 KHERIKLLESQLV--EGEGKPGEVI--NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFL 298
+R K+ +++ + + G ++ F I+ + G+ + ++ +Q G + ++I D+L
Sbjct: 239 DGKRFKIWKAKPLAEKTSFPAGTLVTNKKKFVISMAGGSELELLEVQPTGKKKMNIKDYL 298
Query: 299 L--GCPVIIGCIV 309
G G +
Sbjct: 299 NGQGSHFTSGEKI 311
>gi|57233688|ref|YP_182335.1| methionyl-tRNA formyltransferase [Dehalococcoides ethenogenes 195]
gi|123732421|sp|Q3Z614|FMT_DEHE1 RecName: Full=Methionyl-tRNA formyltransferase
gi|57224136|gb|AAW39193.1| methionyl-tRNA formyltransferase [Dehalococcoides ethenogenes 195]
Length = 312
Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats.
Identities = 101/314 (32%), Positives = 156/314 (49%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMG+ EFA+ L+ L++ ++I VYTQP RPAG RG + V A E L
Sbjct: 4 LRIVFMGSPEFALTPLKMLLAEGYAICGVYTQPDRPAG-RGRELCPPPVKALALERGLAV 62
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L + E + LS DV VV AYGL++PQ +L+ G N H SLLPR+RGA P
Sbjct: 63 YQPQSLKKPEEQAVLSGLKPDVIVVAAYGLILPQAVLDIPAYGVLNIHPSLLPRYRGATP 122
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ GD G+++MK++ LDTGPV +P+ T L +L+ + ++E
Sbjct: 123 VAATLLGGDEWAGVSLMKLEAGLDTGPVYSRAAIPVRPEDTTPLLADKLAFIGGCLLLEL 182
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ P Q TY ++K +VN+ A + +RA P+PG +
Sbjct: 183 LSRIPSLPQPEL-QDNAKATYFGMVTKDMGQVNWQTPAAEIERRVRAFFPWPGVFTSY-- 239
Query: 242 GNKHERIKLLESQLVE--GEGKPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +K+LE++ + +P +V + + G + I+RLQ G D
Sbjct: 240 --NQKTLKILEARPQKLGLGLQPSQVRVYEGDRIMVGSASGELEIIRLQLEGKAACSAAD 297
Query: 297 FLLGCPVIIGCIVG 310
FL G G +G
Sbjct: 298 FLRGQRHFDGVNLG 311
>gi|223985716|ref|ZP_03635763.1| hypothetical protein HOLDEFILI_03069 [Holdemania filiformis DSM
12042]
gi|223962327|gb|EEF66792.1| hypothetical protein HOLDEFILI_03069 [Holdemania filiformis DSM
12042]
Length = 310
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 96/307 (31%), Positives = 152/307 (49%), Gaps = 14/307 (4%)
Query: 8 MGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MGT +FA LQAL +V V +QP + G R K + VH AQ+ +LP L P
Sbjct: 1 MGTPDFACGILQALAELPFVELVGVVSQPDKKVG-RQQKLQPTPVHALAQQMALPVLQPE 59
Query: 67 KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
K+ E E L+ N ++ V AYG ++P+ +LNA K G N HASLLP++RG +P+ AI
Sbjct: 60 KIRTEYAEV-LALNPELIVTCAYGQMVPEAVLNAPKYGCINVHASLLPKYRGGSPMHTAI 118
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ G+ E+G+ IM+M K +D G + ++KV I + T L +L A + E +
Sbjct: 119 IQGETESGVTIMQMVKKMDAGDMLAVKKVAIEAEDTTEILHDKLMAAGAALLKECLLDYI 178
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ + PQ E +++A I+K + R++F +S ++N IR L +P + +
Sbjct: 179 EGRITPVPQDEAQVSFAWNITKEQERIDFSKSGWQIYNQIRGLISWPVGYGVIAGQKMKF 238
Query: 247 RIKLLESQLVEGEGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
E GKP G ++ +A +G + + LQ G + + DF G
Sbjct: 239 WGVRYR---EEKSGKPSGTILGFDETGMQVAAGEGMLIVTELQMEGKKRVSARDFYNG-- 293
Query: 303 VIIGCIV 309
G +
Sbjct: 294 --KGKQL 298
>gi|199597151|ref|ZP_03210583.1| Methionyl-tRNA formyltransferase [Lactobacillus rhamnosus HN001]
gi|199591955|gb|EDZ00030.1| Methionyl-tRNA formyltransferase [Lactobacillus rhamnosus HN001]
Length = 347
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 14/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT +FAV L+ L++ + +V+V TQP R G R K S V + A ++P L
Sbjct: 33 VIFLGTPDFAVPILEGLIAQHYDVVAVMTQPDRKVG-RKQKLAASPVKQAAVAHNIPVLQ 91
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G E Q ++ D+ V AYG +P + L A K+ N H SLLP++RG APIQ
Sbjct: 92 PEKLSGSPELAQAIALAPDLIVTAAYGQFLPTKFLQAAKIAAVNVHGSLLPKYRGGAPIQ 151
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+I+ GD ETG+ I++M K +D G + K+P++ +T + +LS+L ++ +
Sbjct: 152 YSIINGDAETGVTIIEMVKKMDAGDMFAQAKLPLTRQDDTGTVFAKLSLLGRDLLLATLP 211
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ +PQ +T+A I+K + ++ SA+ + +R L P G ++ M
Sbjct: 212 KIIDQTATRTPQDPEKVTFAPTITKEQEHLDIHLSAQALDQWVRGLRPEVGGYVYM---- 267
Query: 244 KHERIKLLESQL--VEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+R KL G V+ IA + + +I LQ AG I D+
Sbjct: 268 NGQRTKLWAITPLTATTNLPAGSVVARSKHQLVIAAGEQSTFQIDELQPAGKSKQHIADY 327
Query: 298 LL--GCPVIIGCI 308
L G + +G
Sbjct: 328 LNGPGRDLTVGQQ 340
>gi|258508665|ref|YP_003171416.1| methionyl-tRNA formyltransferase [Lactobacillus rhamnosus GG]
gi|257148592|emb|CAR87565.1| Methionyl-tRNA formyltransferase [Lactobacillus rhamnosus GG]
gi|259649971|dbj|BAI42133.1| methionyl-tRNA formyltransferase [Lactobacillus rhamnosus GG]
Length = 318
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 14/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT +FAV L+ L++ + +V+V TQP R G R K S V + A ++P L
Sbjct: 4 VIFLGTPDFAVPILEGLIAQHYDVVAVMTQPDRKVG-RKQKLAASPVKQAAVAHNIPVLQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G E Q ++ D+ V AYG +P + L A K+ N H SLLP++RG APIQ
Sbjct: 63 PEKLSGSPELAQAIALAPDLIVTAAYGQFLPTKFLQAAKIAAVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+I+ GD ETG+ I++M K +D G + K+P++ +T + +LS+L ++ +
Sbjct: 123 YSIINGDAETGVTIIEMVKKMDAGDMFAQAKLPLTRQDDTGTVFAKLSLLGRDLLLATLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ +PQ +T+A I+K + ++ SA+ + +R L P G ++ M
Sbjct: 183 KIIDQTATRTPQDPEKVTFAPTITKEQEHLDIHLSAQALDQWVRGLRPEVGGYVYM---- 238
Query: 244 KHERIKLLESQL--VEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+R KL G V+ IA + + +I LQ AG I D+
Sbjct: 239 NGQRTKLWAITPLTATTNLPAGSVVARSKHQLVIAAGEQSTFQIDELQPAGKSKQHIADY 298
Query: 298 LL--GCPVIIGCI 308
L G + +G
Sbjct: 299 LNGPGRDLTVGQQ 311
>gi|269302433|gb|ACZ32533.1| methionyl-tRNA formyltransferase [Chlamydophila pneumoniae LPCoLN]
Length = 321
Score = 145 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 107/310 (34%), Positives = 166/310 (53%), Gaps = 9/310 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M L+VV+ GT FA LQ L+ I +V T+ +P +R + + S V A L
Sbjct: 1 MNLKVVYFGTPTFAATVLQDLLHHKIPITAVVTRVDKPQ-KRSAQLIPSPVKTIALTHGL 59
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P+K ++ + +FNADV +VVAYG ++ Q +L+ + G YN HA LLP +RGA
Sbjct: 60 PLLQPSKASDPQFIEELRAFNADVFIVVAYGAILRQIVLDIPRYGCYNLHAGLLPAYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQR IM G E+G +++MD +DTG +A + +VPI ++ + L L+ A ++
Sbjct: 120 APIQRCIMEGATESGNTVIRMDAGMDTGDMANITRVPIGPDMTSGELADALASQGAEVLI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++E L L Q T A K+SK E +V + + A+ + HIR ++P PGAW
Sbjct: 180 KTLQQIESGQLQLVSQDAALATIAPKLSKEEGQVPWDKPAKEAYAHIRGVTPAPGAWTLF 239
Query: 240 -MIGNKHERIKLLESQLVEGE---GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+R+ + ++ L+ G PG V+ IACS+GA+ + +Q G
Sbjct: 240 SFSEKAPKRLMIRKASLLAEAGRYGAPGTVVVTDRQELAIACSEGAICLHEVQVEGKGST 299
Query: 293 DIGDFLLGCP 302
+ FL G P
Sbjct: 300 NSKSFLNGYP 309
>gi|120601081|ref|YP_965481.1| methionyl-tRNA formyltransferase [Desulfovibrio vulgaris DP4]
gi|166214892|sp|A1V9B4|FMT_DESVV RecName: Full=Methionyl-tRNA formyltransferase
gi|120561310|gb|ABM27054.1| methionyl-tRNA formyltransferase [Desulfovibrio vulgaris DP4]
Length = 330
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 107/309 (34%), Positives = 163/309 (52%), Gaps = 10/309 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
L++VFMGT +FA A+L+ L++ +V VYTQP RP G RG + SAV A E L
Sbjct: 6 PLKIVFMGTPDFAAASLRHLLAWDGCDVVGVYTQPDRPCG-RGQQCRPSAVKMLALEHGL 64
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E Q F AD+ VV AYGL++PQ +L+A +G N H SLLPR+RGA
Sbjct: 65 DVRQPVNFRDEADVQALRDFGADILVVAAYGLILPQSVLDAAPMGAVNVHGSLLPRYRGA 124
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRA+M GD TGI IM++ K LD GP+ + + I + + L +L+ L +V
Sbjct: 125 APIQRAVMNGDAVTGITIMQVVKQLDAGPMLLQKALGIGCDETSGQLHDQLAELGGRLLV 184
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + +L + PQ + TYA K++K + V++ R+A VH +R ++P+P A+ +
Sbjct: 185 ETLARLRAGTIMPIPQDDALATYAAKLTKADGLVDWNRTAVEVHAQVRGVTPWPAAYFTL 244
Query: 240 MIGNKHERIKLLES----QLVEGEGKPGEV---INPNFTIACSQGAVRIMRLQRAGGRVL 292
+ + +E L+E PG + ++ AC+ + ++ A + +
Sbjct: 245 RREGQKDVRVTIEPGTIGPLLEQPAVPGTIVGLVDGAIAFACADRTYLVRTIRPADKKPM 304
Query: 293 DIGDFLLGC 301
F G
Sbjct: 305 TGEAFWCGY 313
>gi|302335854|ref|YP_003801061.1| methionyl-tRNA formyltransferase [Olsenella uli DSM 7084]
gi|301319694|gb|ADK68181.1| methionyl-tRNA formyltransferase [Olsenella uli DSM 7084]
Length = 309
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 98/304 (32%), Positives = 152/304 (50%), Gaps = 7/304 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV LQAL ++ H + V T+P G RG + V S V +KA LP
Sbjct: 1 MRIVFMGTPDFAVPPLQALAAA-HEVALVVTRPDAVRG-RGRRLVPSPVKEKALALGLPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ T++ E + + DV V A+G ++P +L+A LG N H SLLPRWRGAAP+
Sbjct: 59 VEATRITDELLARIRALAPDVICVAAFGCILPDELLSAAPLGCVNVHGSLLPRWRGAAPV 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI+AGD GI+IM++ LD G V + L EL+ L A ++ A+
Sbjct: 119 QRAILAGDERAGISIMRVVHELDAGAYCRQASVEV-GERGCEELMGELASLGARELLGAL 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+E Q ++ +YA+KI+K E ++ +A ++A A L +
Sbjct: 178 ADMEAGIAVWVEQDDSEASYAKKIAKQEMGLDPAATALANRRCVQASGATAPARLSVGGC 237
Query: 243 NKHERIKLLESQLVE--GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ + G+ PG+V+ + CS GA+ ++R++ G R +D +
Sbjct: 238 GLRALSARVAGETASDVGDVAPGQVVARKGRVFLGCSDGALELLRVKPDGRREMDASAWA 297
Query: 299 LGCP 302
G
Sbjct: 298 QGLH 301
>gi|157737840|ref|YP_001490524.1| methionyl-tRNA formyltransferase [Arcobacter butzleri RM4018]
gi|157699694|gb|ABV67854.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Arcobacter butzleri RM4018]
Length = 306
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 73/312 (23%), Positives = 141/312 (45%), Gaps = 10/312 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF-- 58
M +V+FMGT +A + L+SS++ ++ ++TQP +P G R + + +
Sbjct: 1 MGKKVLFMGTPSYATEIFKKLLSSNYEVIGLFTQPDKPVG-RKQVLTPPDIKQFCIDNSI 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
++P P KL + ++ N HASLLP++RG
Sbjct: 60 NIPIFQPEKLRDNLAAYLVIKELKPDFIIVAAYGQILPKEILKLAPCINLHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+PIQ +++ DN TG+ M M++ LD+G + ++ + I+ + + +LS++ A
Sbjct: 120 ASPIQESLLNDDNFTGVTSMFMEEGLDSGDILALQYLKITPTMEVSEAFSKLSLIAAELT 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAE-NVHNHIRALSPFPGAWL 237
+ +D ++ Q E+ +++ +KI K V+F + + + P
Sbjct: 180 ITTLDNFDRL--NPIKQNESKVSFCKKIKKENGLVDFSDAKNLFLKYKAYSFWPGIFLES 237
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
E+ + + LLE GK ++ + C +G+++I LQ + ++ DF
Sbjct: 238 ELKLKDVE----LLEETSQNEAGKILDICKDYIIVGCKKGSLKIKTLQAPSKKAINSVDF 293
Query: 298 LLGCPVIIGCIV 309
+ G V IG I+
Sbjct: 294 VRGQRVEIGDIL 305
>gi|15617091|ref|NP_240304.1| methionyl-tRNA formyltransferase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681843|ref|YP_002468229.1| methionyl-tRNA formyltransferase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682398|ref|YP_002468782.1| methionyl-tRNA formyltransferase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471548|ref|ZP_05635547.1| methionyl-tRNA formyltransferase [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11131994|sp|P57564|FMT_BUCAI RecName: Full=Methionyl-tRNA formyltransferase
gi|254789342|sp|B8D9S0|FMT_BUCA5 RecName: Full=Methionyl-tRNA formyltransferase
gi|254789343|sp|B8D822|FMT_BUCAT RecName: Full=Methionyl-tRNA formyltransferase
gi|25320661|pir||F84987 methionyl-tRNA formyltransferase (EC 2.1.2.9) [imported] - Buchnera
sp. (strain APS)
gi|10039156|dbj|BAB13190.1| methionyl-tRNA formyltransferase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219622131|gb|ACL30287.1| methionyl-tRNA formyltransferase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624686|gb|ACL30841.1| methionyl-tRNA formyltransferase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311087383|gb|ADP67463.1| methionyl-tRNA formyltransferase [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087880|gb|ADP67959.1| methionyl-tRNA formyltransferase [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 314
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 104/317 (32%), Positives = 171/317 (53%), Gaps = 14/317 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT F+ L AL++SSH ++SV TQP R +G RG K S V + +P
Sbjct: 3 KLKIVFAGTEYFSAEHLHALITSSHDVISVITQPDRYSG-RGQKITFSPVKILSLNNGIP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + L NAD+ VV+YG +IP++ILN G N HASLLPRWRGA
Sbjct: 62 IFQPENLNDTDFQNKLLKLNADIMTVVSYGKIIPKKILNMFSKGCINVHASLLPRWRGAT 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ +I+ GD +TGI+I++M+ +D+G + ISS T L +L + A++E
Sbjct: 122 PIQSSILHGDKKTGISIIQMNDEIDSGNIMHSITCSISSKDTTKTLSLKLIKIGIEALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++K+ N + Q E + ++KI K + +++ SAE + IRA +P+P +
Sbjct: 182 VLEKIILNTVIYKKQNEKNVILSKKIYKKDALLDWNLSAEKLERLIRAFNPWPICYF--- 238
Query: 241 IGNKHERIKLLESQLV---EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
++++ IK+ +S+++ + GE+I I S + I +LQ G +++D+
Sbjct: 239 -LSQNKNIKVWQSEVIPITQNNRSVGEIISYNKNGIQINTSHQILNIKKLQFPGKKIIDV 297
Query: 295 GDFLLGCP--VIIGCIV 309
+ ++ IG I+
Sbjct: 298 KNVIISKKKLFKIGTIL 314
>gi|159037485|ref|YP_001536738.1| methionyl-tRNA formyltransferase [Salinispora arenicola CNS-205]
gi|189044563|sp|A8LY30|FMT_SALAI RecName: Full=Methionyl-tRNA formyltransferase
gi|157916320|gb|ABV97747.1| methionyl-tRNA formyltransferase [Salinispora arenicola CNS-205]
Length = 308
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 97/312 (31%), Positives = 153/312 (49%), Gaps = 10/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT A+ L A+ S H +++V T+P PAG RG S V A E +
Sbjct: 1 MRVIFAGTPAVAIPALAAVADSRHELLAVVTRPDAPAG-RGRGLSRSPVAAWADEQGVEV 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + + E+ ++ + D VVAYG ++P L + G+ N H SLLP WRGAAP
Sbjct: 60 LTPARPREPEFLDRLRALAPDCVPVVAYGALVPPVALEIPQHGWVNLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A++ GD TG ++ ++++ LDTGPV + + L + L+ A +
Sbjct: 120 VQHAVLHGDELTGASVFQLEQGLDTGPVYGTLTDEVGPADTSGDLLERLAHSGAGLLTAV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D +E PQ +G++ A K++ + RV + A V +RA +P PG W
Sbjct: 180 LDAIEDGTARAEPQPVDGVSLAPKLTVADARVRWGDPAFAVDRRVRACTPAPGPWTTFRD 239
Query: 242 GNKHERIKLLESQLVEG--EGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
ER+KL V E KPGE++ + VR+ ++ AG R + D+
Sbjct: 240 ----ERVKLGPVTPVADGPELKPGELLVERSRVLAGTATTPVRLGEVRAAGKRAMPASDW 295
Query: 298 LLGCPVIIGCIV 309
G V +G ++
Sbjct: 296 ARGVRVTVGEVL 307
>gi|68536090|ref|YP_250795.1| hypothetical protein jk1013 [Corynebacterium jeikeium K411]
gi|123761872|sp|Q4JVI0|FMT_CORJK RecName: Full=Methionyl-tRNA formyltransferase
gi|68263689|emb|CAI37177.1| fmt [Corynebacterium jeikeium K411]
Length = 327
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 95/313 (30%), Positives = 151/313 (48%), Gaps = 15/313 (4%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E A L+ L+ +V+V TQP G RG S V + A+E ++P
Sbjct: 1 MKIVFAGTPEPAAVALEHLIADERIEVVAVVTQPDAKRG-RGRSLRPSKVAEVAEEAAIP 59
Query: 62 ALVPTKLGQEEYEQFLS---------FNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
L + A VVAYG +IP+ IL+ + G+ N H SL
Sbjct: 60 TYKWPSLKAGTESGDEARAVLGDLAAQGVTAAAVVAYGNLIPKDILDVFEHGWVNLHYSL 119
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAP+Q A+ AGD TG +I ++++ LDTGPVA I L L+
Sbjct: 120 LPRWRGAAPVQAALAAGDETTGASIFRIEEGLDTGPVAAQLTQKIGLEDTADDLLASLTY 179
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ + + +++ LS Q + T+A KI + ++++ + AE + RA +P
Sbjct: 180 AGRELLADTLVAMDEGKAELSGQDDAQATHAPKIHPADAQIDWSQPAEVIQRVARAHTPA 239
Query: 233 PGAWLEMMIGNKHERIKLLESQLVE-GEGKPGEVIN--PNFTIACSQGAVRIMRLQRAGG 289
PGAW ++ G +++ LL S + E PGEV+ + G + I R+Q G
Sbjct: 240 PGAWT-LLDGQRYKIGMLLPSDPADVAELGPGEVVASPKKVFVGTGTGPLEITRIQPPGK 298
Query: 290 RVLDIGDFLLGCP 302
++++ + G
Sbjct: 299 KMMEAAAWARGQQ 311
>gi|313665408|ref|YP_004047279.1| methionyl-tRNA formyltransferase [Mycoplasma leachii PG50]
gi|312949381|gb|ADR23977.1| methionyl-tRNA formyltransferase [Mycoplasma leachii PG50]
Length = 317
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 79/302 (26%), Positives = 145/302 (48%), Gaps = 7/302 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
++VVF GT + L+AL+ + +V V +QP +P G R + V + V + A + +L
Sbjct: 4 KIKVVFCGTPKIGSDVLKALIEMNQVEVVLVISQPDKPIG-RKKEIVYTPVKQLALQNNL 62
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
V + Y++ D + A+G IP +IL K+ N H SLLP+ RG A
Sbjct: 63 KV-VQPNKIGDIYDELAKLEFDFLITCAFGQFIPTKILKLAKIDSINFHGSLLPKLRGGA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI GD +TGI IM+M K +D G + I + ++ L +++ L +
Sbjct: 122 PIQYAIKNGDKKTGITIMQMVKQMDAGDYYVQESIDILDSDDSGSLFEKMGQLAYSMCKK 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + L Q E+G+T+ + IS E ++N+ ++ ++ N IR+L P P + +
Sbjct: 182 YLVDIYNHKFELIKQNEDGVTFCKNISSEEEKINWNNTSLDIFNLIRSLCPTPISHTTIN 241
Query: 241 IGNKHERI-KLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ K+++ PG +I + ++ I+ +Q+ G +++ +
Sbjct: 242 NQRYKIKSSKIIDLDDQNKNVAPGTIIDINKQGIVVKTLDSSLLILEIQKEGKKMILASN 301
Query: 297 FL 298
+
Sbjct: 302 YY 303
>gi|46581766|ref|YP_012574.1| methionyl-tRNA formyltransferase [Desulfovibrio vulgaris str.
Hildenborough]
gi|73919389|sp|Q725Q9|FMT_DESVH RecName: Full=Methionyl-tRNA formyltransferase
gi|46451189|gb|AAS97834.1| methionyl-tRNA formyltransferase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311232325|gb|ADP85179.1| methionyl-tRNA formyltransferase [Desulfovibrio vulgaris RCH1]
Length = 330
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 107/309 (34%), Positives = 163/309 (52%), Gaps = 10/309 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
L++VFMGT +FA A+L+ L++ +V VYTQP RP G RG + SAV A E L
Sbjct: 6 PLKIVFMGTPDFAAASLRHLLAWDGCDVVGVYTQPDRPCG-RGQQCRPSAVKMLALEHGL 64
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E Q F AD+ VV AYGL++PQ +L+A +G N H SLLPR+RGA
Sbjct: 65 DVRQPVSFRDEADVQALRDFGADILVVAAYGLILPQSVLDAAPMGAVNVHGSLLPRYRGA 124
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRA+M GD TGI IM++ K LD GP+ + + I + + L +L+ L +V
Sbjct: 125 APIQRAVMNGDAVTGITIMQVVKQLDAGPMLLQKALGIGCDETSGQLHDQLAELGGRLLV 184
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E + +L + PQ + TYA K++K + V++ R+A VH +R ++P+P A+ +
Sbjct: 185 ETLARLRAGTIMPIPQDDALATYAAKLTKADGLVDWNRTAVEVHAQVRGVTPWPAAYFTL 244
Query: 240 MIGNKHERIKLLES----QLVEGEGKPGEV---INPNFTIACSQGAVRIMRLQRAGGRVL 292
+ + +E L+E PG + ++ AC+ + ++ A + +
Sbjct: 245 RREGQKDVRVTIEPGTIGPLLEQPAVPGTIVGLVDGAIAFACADRTYLVRTIRPADKKPM 304
Query: 293 DIGDFLLGC 301
F G
Sbjct: 305 TGEAFWCGY 313
>gi|94987208|ref|YP_595141.1| methionyl-tRNA formyltransferase [Lawsonia intracellularis
PHE/MN1-00]
gi|94731457|emb|CAJ54820.1| Methionyl-tRNA formyltransferase [Lawsonia intracellularis
PHE/MN1-00]
Length = 322
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 105/316 (33%), Positives = 162/316 (51%), Gaps = 17/316 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
LR+VFMGT EFA LQ +V+S I++ Y QP RP G RG K SAV + +
Sbjct: 7 PLRIVFMGTPEFAAIILQKIVASGKVDIIASYCQPDRPVG-RGHKVQFSAVKILSNSLRI 65
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P E + + D+ VV AYGL++PQ +L+ + N HASLLP +RGA
Sbjct: 66 PVYQPVNFKSEYEIEKLYALKPDLLVVAAYGLILPQSVLDIPAISPLNVHASLLPCYRGA 125
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRA+M D +TG+ I++M+K LDTG + ++PI+ A + ++L+ L ++
Sbjct: 126 APIQRALMNNDKKTGVTIIRMEKGLDTGAMFTHEEIPINMEDTAATMHEKLAQLGGKLLI 185
Query: 180 EAMDKLEQNN-LPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+++ Q +PQ + TYA K++K + + + AENVH +R ++P+PGA
Sbjct: 186 NIFEQIIQGTLSDPTPQDDIQATYAPKLTKSDGCIYWDMPAENVHAVVRGVTPWPGAQTS 245
Query: 239 MMIGNKHERIKLLES---------QLVEGEGK-PGEVIN---PNFTIACSQGAVRIMRLQ 285
+ N++ L + + EG+ PG ++ IAC I L+
Sbjct: 246 FKLVNRNPINILFQPGEIGSNELFKYNEGDSPLPGSILGLKGNAIAIACKDVPYLIYTLR 305
Query: 286 RAGGRVLDIGDFLLGC 301
G + + DF G
Sbjct: 306 PEGRKTMTAKDFWNGY 321
>gi|241889587|ref|ZP_04776885.1| methionyl-tRNA formyltransferase [Gemella haemolysans ATCC 10379]
gi|241863209|gb|EER67593.1| methionyl-tRNA formyltransferase [Gemella haemolysans ATCC 10379]
Length = 320
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 90/318 (28%), Positives = 157/318 (49%), Gaps = 17/318 (5%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
++VFMGT +FAV L+ L+ + + + V TQP + G R + A E ++ L
Sbjct: 5 KIVFMGTPKFAVPVLEMLIEN-YGVDLVITQPDKKVG-RKKVLTPPPIKVVALEKNIKVL 62
Query: 64 VPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ +E N D+ + AYG ++P++IL + N H SLLP+ RG AP
Sbjct: 63 QPEKISTDEETYNTLKELNPDIIITAAYGQLVPEKILEIPEHKCINVHGSLLPKLRGGAP 122
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ +I+ +TGI IM M K LD G + +V I + N L +LS+ + E
Sbjct: 123 IQYSILEDHGKTGITIMYMVKKLDAGDMISKVEVDILDSDNYETLHDKLSIAGRDLLNET 182
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ K+ ++ Q + T+A I + + ++++ SA +V N +RAL P PGA+ +
Sbjct: 183 LPKIFSGDISPEKQDDEEATFARNILREDEKIDWNTSARDVFNKVRALDPTPGAFTYLEG 242
Query: 242 GNKHERIKLLESQLVEGE-----GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVL 292
+K+ ++ V+ + K G +I + I C + +++ LQ +G + +
Sbjct: 243 N----VLKIWSTEEVKQDFESNFDKVGTIIKQDKKSIYILCGKNTVLKVNELQVSGKKRM 298
Query: 293 DIGDFLLGCPVIIGCIVG 310
+ +FL +G ++G
Sbjct: 299 PVVNFLSNKKDYVGTVLG 316
>gi|256847373|ref|ZP_05552819.1| methionyl-tRNA formyltransferase [Lactobacillus coleohominis
101-4-CHN]
gi|256716037|gb|EEU31012.1| methionyl-tRNA formyltransferase [Lactobacillus coleohominis
101-4-CHN]
Length = 316
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 102/311 (32%), Positives = 162/311 (52%), Gaps = 14/311 (4%)
Query: 5 VVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
VVFMGT +FAV LQAL++S + + +V TQP RP G R S V + A + + L
Sbjct: 4 VVFMGTPQFAVPILQALITSPDYDVQAVLTQPDRPRG-RKHVMTASPVKELAVKNGIEVL 62
Query: 64 VPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P K G E E+ + + D+ + AYG +P ++L A + N H SLLP++RG API
Sbjct: 63 QPAKLSGSPEMERVIDLHPDLMITAAYGQFLPTKMLQAANIAAINVHGSLLPKYRGGAPI 122
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q A+M GD ETG+ IM M K +D G + R +PI+ +T + ++LS+L ++E +
Sbjct: 123 QYAVMNGDTETGVTIMYMVKKMDAGDIIAQRSIPITKQDDTGTMFEKLSLLGRDLLMETL 182
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
L + P PQ E + ++ IS + R+++ A + + +R L P P + +
Sbjct: 183 PALIEGTAPSIPQDETKVVFSPNISSAQERIDYTLPANRIDDLVRGLRPQPLGNMII--- 239
Query: 243 NKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIGD 296
R K+++ + +PG+V+ IA G +I RL+ AG ++DI
Sbjct: 240 -DGVRTKIIDVTPLPESTSLEPGKVVRIAKHALVIAGGDGTTYQINRLKPAGKGLMDITA 298
Query: 297 FLLGCP-VIIG 306
+L G + G
Sbjct: 299 YLNGNQDLQPG 309
>gi|22299417|ref|NP_682664.1| methionyl-tRNA formyltransferase [Thermosynechococcus elongatus
BP-1]
gi|22295600|dbj|BAC09426.1| methionyl-tRNA formyltransferase [Thermosynechococcus elongatus
BP-1]
Length = 350
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 107/327 (32%), Positives = 156/327 (47%), Gaps = 23/327 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L +V+ GT EFA+A LQ L+ + + ++ V TQP R G RG + S V A LP
Sbjct: 20 LNIVYFGTPEFALAPLQRLLQTETYQVLGVVTQPDRRRG-RGNQLSPSPVKAFALRHGLP 78
Query: 62 ALVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P +L Q+ S ADV VVVAYG ++PQ IL+ + G N H SLLPR+RGA
Sbjct: 79 IWQPPRLRQDPQLPEVLRSLAADVFVVVAYGQILPQSILDIPRYGCINIHGSLLPRYRGA 138
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQ A+ G+ ETG+ M MD LDTGP+ RKV I N L +LS A ++
Sbjct: 139 APIQWALYHGEEETGVTTMLMDAGLDTGPMLLKRKVRIHLEDNATTLSAKLSETGADLLL 198
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + +L Q PQ + TYA I K + +++ RSA +HN +RA P+ +
Sbjct: 199 DTLQQLPQLQAE--PQNDAEATYAPLIQKSDYAIDWGRSALALHNQVRAFYPYAYTQWQG 256
Query: 240 MIGNKHERIKLLE-------------SQLVEGEGKPGEVI----NPNFTIACSQGAVRIM 282
+ L+ + E PG V+ + +G + +
Sbjct: 257 TALKILQTWPLIPEVAAKLPEPLQSYVREPEAAAPPGTVLALIKGWGPVVQTGKGPLLLS 316
Query: 283 RLQRAGGRVLDIGDFLLGCPVIIGCIV 309
++Q +G + DF+ G + I
Sbjct: 317 QVQLSGRKAQSGWDFVNGVRLAIATQF 343
>gi|160915159|ref|ZP_02077372.1| hypothetical protein EUBDOL_01167 [Eubacterium dolichum DSM 3991]
gi|158432958|gb|EDP11247.1| hypothetical protein EUBDOL_01167 [Eubacterium dolichum DSM 3991]
Length = 314
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 96/306 (31%), Positives = 147/306 (48%), Gaps = 12/306 (3%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M ++FMGT E AVA L L+ + IV V TQP + G R + V + A
Sbjct: 1 MKKVNILFMGTPEIAVAMLSRLLEDKYRIVGVVTQPDKKIG-RKQLLTMPPVKELALAHD 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P + +E + + DV + AYG IP+ +L K G +N H SLLP+ RG
Sbjct: 60 IPVYQPGSIKEEYEQLM-ELDIDVLITCAYGQFIPKALLEYPKFGSFNVHTSLLPKLRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API RAIM G++ +G++I +M +D G V +KV I+ L +L+ + A +
Sbjct: 119 APIHRAIMTGESFSGVSIQRMVAKMDAGAVCAQQKVEITQEDTMGTLYDKLAQVGADLLA 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + K+ N Q E T+A I+K E V+F + V+NHIRAL P P A+ +
Sbjct: 179 KTLPKIINNEACFVEQREEEATFAYNITKEEELVDFECDVQTVYNHIRALIPQPCAYAYV 238
Query: 240 MIGNKHERIKLLESQLVEGEGK--PGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+++K +++++ G++ I+ I G V I LQ G D
Sbjct: 239 ----HQKKLKFHKARMIRDNQPHVCGQIEGLIDQGIAIGAMNGYVLIDELQMEGKAKTDA 294
Query: 295 GDFLLG 300
F G
Sbjct: 295 KSFYNG 300
>gi|145590256|ref|YP_001156853.1| methionyl-tRNA formyltransferase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|189044569|sp|A4T0M5|FMT_POLSQ RecName: Full=Methionyl-tRNA formyltransferase
gi|145048662|gb|ABP35289.1| methionyl-tRNA formyltransferase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 332
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 109/318 (34%), Positives = 159/318 (50%), Gaps = 30/318 (9%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VF GT EFA ++A+ ++ H IV TQP R AG RG+ S V + A E ++P
Sbjct: 1 MKIVFAGTPEFAAQAMRAIHAAGHEIVLALTQPDRRAG-RGMHLQASPVKEFALEKNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQR----------------ILNATKLGFY 106
L P L + + A+ A A + G +
Sbjct: 60 LQPETLRRNNKDPEKQQQAEDAYRALINTNFDAMVVVAYGLILPQEILDITQQAPRFGSF 119
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N HASLLPRWRGAAPIQRAI AGD +TG+ IM+M+ LDTG V + I+S+ ++ L
Sbjct: 120 NIHASLLPRWRGAAPIQRAIEAGDAKTGVCIMQMEAGLDTGDVVLTADLAIASDETSSSL 179
Query: 167 QQELSVLCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNH 225
L+ L A +V+A+ L+ +PQ G+TYAEKI K E +++ SA +
Sbjct: 180 HDRLAALGAGLIVDALSLLQDGKGLSRTPQPALGVTYAEKILKAEADLDWSLSAREIDAR 239
Query: 226 IRALSPFPGAWLEMMIGNKHERIKLLESQLVEGE-----GKPGEVI---NPNFTIACSQG 277
IRA +PFPGA + E IKL +S+L + + G G VI + C G
Sbjct: 240 IRAFNPFPGAISNLNA----ETIKLWKSRLADEDAYSEAGPIGAVIGFSEDGVFVRCGDG 295
Query: 278 AVRIMRLQRAGGRVLDIG 295
+ I+ Q+ GG+ ++
Sbjct: 296 VIEILEAQKPGGKKMNAK 313
>gi|21674274|ref|NP_662339.1| methionyl-tRNA formyltransferase [Chlorobium tepidum TLS]
gi|25452944|sp|Q8KCG8|FMT_CHLTE RecName: Full=Methionyl-tRNA formyltransferase
gi|21647444|gb|AAM72681.1| methionyl-tRNA formyltransferase [Chlorobium tepidum TLS]
Length = 314
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 87/306 (28%), Positives = 142/306 (46%), Gaps = 5/306 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS--HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M LRVVFMGT EFAV +L+ + + V V T +P + + V + A E
Sbjct: 1 MGLRVVFMGTPEFAVPSLRRIAAMKPQFETVLVVTGCDKPRRSKNSPPEPTPVKQAALEL 60
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP L + E+ ++ +VVA V+P +L LG +N H SLLP +RG
Sbjct: 61 GLPVLEADDVSSHEFALQVAAARPDVIVVAAFRVLPPEVLELPPLGTFNLHGSLLPAYRG 120
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+ AI+ GD ETG+ + K +DTG + M + PI + N L + LS + A +
Sbjct: 121 AAPVNWAIINGDAETGVTTFFLQKSVDTGNIITMDRTPIGPDENAFELLKRLSEIGAGTV 180
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + + Q E T A K+++ TR+++ + + +H+ IR L+ P AW
Sbjct: 181 ERTLTMIADGAVMPEKQDERFATKAPKLNRENTRIDWNQPVQRLHDFIRGLALKPAAWTT 240
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ K + +PG + + +A + G + ++ +Q G + +D
Sbjct: 241 FGG-KSLKIYKAKACAIETAPDEPGTLRIADGRLLVAGTDGWIELLSVQAEGKKAMDGEL 299
Query: 297 FLLGCP 302
F G
Sbjct: 300 FARGLR 305
>gi|320103813|ref|YP_004179404.1| methionyl-tRNA formyltransferase [Isosphaera pallida ATCC 43644]
gi|319751095|gb|ADV62855.1| methionyl-tRNA formyltransferase [Isosphaera pallida ATCC 43644]
Length = 325
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 160/317 (50%), Gaps = 12/317 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
RVV +GT EFA+ T + L ++V++ TQP RP GRR + + +A+ AQ+ +
Sbjct: 9 RVVMLGTGEFALPTFERLCDRGWNMVALVTQPDRPQGRR-QELIPAAIKVAAQQRGIDVF 67
Query: 64 VPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P + E +Q F D+ V AYG ++ L KL N HAS+LP +RGAAPI
Sbjct: 68 QPESINAPESLDQLRRFEPDLLVTAAYGQILSAEALAVPKLAAINLHASILPAYRGAAPI 127
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
RAI G+ TG+ +++M LD G + + + PI + L+ L+ L A + E +
Sbjct: 128 ARAIQRGETVTGVTVIRMTPQLDAGGMLAVARTPIDPDETAGELEDRLAALGAPLVEETL 187
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
++L + PQ T A K+ K E+R+++ ++A +HNH+RAL P+P A
Sbjct: 188 ERLLAGTVEELPQDPTQATRAPKLRKEESRIDWSQTARTIHNHVRALHPWPLADTLWTPR 247
Query: 243 NKHE-RIKLLESQLVEGEGKP-----GE--VIN-PNFTIACSQGAVR-IMRLQRAGGRVL 292
+ + R+ +L++Q+ + G ++ ++C G + + +Q G + +
Sbjct: 248 GRPQVRLIVLKTQVESDDPTIANVSFGTAWIVEPKRLVVSCGAGTLLALREVQIPGKKPM 307
Query: 293 DIGDFLLGCPVIIGCIV 309
I FL G PV G
Sbjct: 308 PIAAFLNGYPVAPGDRF 324
>gi|260664025|ref|ZP_05864878.1| methionyl-tRNA formyltransferase [Lactobacillus jensenii SJ-7A-US]
gi|260561911|gb|EEX27880.1| methionyl-tRNA formyltransferase [Lactobacillus jensenii SJ-7A-US]
Length = 314
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 87/313 (27%), Positives = 167/313 (53%), Gaps = 13/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT F L+ L+ +S+ +++V TQP + G R K S V + AQ++ LP
Sbjct: 4 VIFLGTPNFGATVLEGLIKNSYQVLAVVTQPDKKVG-RKQKLTPSPVKEMAQKYDLPIYQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P + EE + ++ +AD+ + AYG +P + L + K+ N H SLLP++RG APIQ
Sbjct: 63 PARLPRSEELDTLINLHADLIITAAYGQFLPTKFLKSAKIAAVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETG+ IM+M K +D G + K+ I + L +++++L +++ +
Sbjct: 123 YSLINGDKETGVTIMEMVKEMDAGDMYAQEKLSIEPDDTAGSLFEKMAILGRDLLLKTLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ + PQ + + ++ ISK + R+ +A VHN IR L+P PGA+L +
Sbjct: 183 SIIDGSCDKKPQDTSKVVFSPNISKEQERITKDMTASQVHNLIRGLNPDPGAYLII---- 238
Query: 244 KHERIKLLESQLVEGEGK--PGEVINPN--FTIACSQG-AVRIMRLQRAGGRVLDIGDFL 298
+R+K+ S++ + G +++ + F ++ + + + +Q G + + D++
Sbjct: 239 NGQRMKVWASEVTNETTQFPAGALVDNHKRFAVSFADNTVLNLTEIQPTGKKRMAGRDYM 298
Query: 299 L--GCPVIIGCIV 309
G + +G ++
Sbjct: 299 NGKGSSLKLGEVI 311
>gi|238854794|ref|ZP_04645124.1| methionyl-tRNA formyltransferase [Lactobacillus jensenii 269-3]
gi|282933872|ref|ZP_06339220.1| methionyl-tRNA formyltransferase [Lactobacillus jensenii 208-1]
gi|313472304|ref|ZP_07812796.1| methionyl-tRNA formyltransferase [Lactobacillus jensenii 1153]
gi|238832584|gb|EEQ24891.1| methionyl-tRNA formyltransferase [Lactobacillus jensenii 269-3]
gi|239529846|gb|EEQ68847.1| methionyl-tRNA formyltransferase [Lactobacillus jensenii 1153]
gi|281301961|gb|EFA94215.1| methionyl-tRNA formyltransferase [Lactobacillus jensenii 208-1]
Length = 314
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 87/313 (27%), Positives = 167/313 (53%), Gaps = 13/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT F L+ L+ +S+ +++V TQP + G R K S V + AQ++ LP
Sbjct: 4 VIFLGTPNFGATVLEGLIKNSYQVLAVVTQPDKKVG-RKQKLTPSPVKEMAQKYDLPIYQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P + EE + ++ +AD+ + AYG +P + L + K+ N H SLLP++RG APIQ
Sbjct: 63 PARLPRSEELDTLINLHADLIITAAYGQFLPTKFLKSAKIAAVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETG+ IM+M K +D G + K+ I + L +++++L +++ +
Sbjct: 123 YSLINGDKETGVTIMEMVKKMDAGDMYAQEKLSIEPDDTAGSLFEKMAILGRDLLLKTLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ + PQ + + ++ ISK + R+ +A VHN IR L+P PGA+L +
Sbjct: 183 SIIDGSCDKKPQDTSKVVFSPNISKEQERITKDMTASQVHNLIRGLNPDPGAYLII---- 238
Query: 244 KHERIKLLESQLVEGEGK--PGEVINPN--FTIACSQG-AVRIMRLQRAGGRVLDIGDFL 298
+R+K+ S++ + G +++ + F ++ + + + +Q G + + D++
Sbjct: 239 NGQRMKVWASEVTNETTQFPAGALVDNHKRFAVSFADNTVLNLTEIQPTGKKRMAGRDYM 298
Query: 299 L--GCPVIIGCIV 309
G + +G ++
Sbjct: 299 NGKGSSLKLGEVI 311
>gi|242277626|ref|YP_002989755.1| methionyl-tRNA formyltransferase [Desulfovibrio salexigens DSM
2638]
gi|242120520|gb|ACS78216.1| methionyl-tRNA formyltransferase [Desulfovibrio salexigens DSM
2638]
Length = 316
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 10/307 (3%)
Query: 4 RVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VFMGT +FA L+ LV +++ YTQP R G RG K SAV A + +P
Sbjct: 7 KIVFMGTPDFASTILEYLVEWDGCDVIAAYTQPDRKCG-RGQKVRCSAVKDVALKNDIPV 65
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P +++ E+ + D VV AYGL++PQ +L+ + N HASLLP++RGAAP
Sbjct: 66 YQPLNFKDEKDVEELRALEPDFLVVAAYGLILPQSVLDVPAVMPINVHASLLPKYRGAAP 125
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RA+ GD+ TGI IMKM+ LDTGP+ + + I+ + T + EL+ + ++E
Sbjct: 126 IHRAVANGDHATGITIMKMEAGLDTGPILVQQALGIAWDDFTGKVHDELADMGGPLVMET 185
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + L + PQ ++ TYAEK+SK E +++ + VHN IR + P+PGA+
Sbjct: 186 LLRYRDGRLTVMPQDDSIATYAEKLSKEEGLIDWNLPVKEVHNKIRGMYPWPGAYYFWTP 245
Query: 242 GNKHERIKLLES----QLVEGEGKPGEVI--NPNFT-IACSQGAVRIMRLQRAGGRVLDI 294
K +L GE PG ++ + IAC +++ AG + +D
Sbjct: 246 EGKDPIRLVLSPGKPGDDEVGEHAPGTIVGESDGMLGIACQDKIYLASKVKPAGKKEMDG 305
Query: 295 GDFLLGC 301
F+ G
Sbjct: 306 KAFMCGY 312
>gi|183982228|ref|YP_001850519.1| methionyl-tRNA formyltransferase Fmt [Mycobacterium marinum M]
gi|229487502|sp|B2HP60|FMT_MYCMM RecName: Full=Methionyl-tRNA formyltransferase
gi|183175554|gb|ACC40664.1| methionyl-tRNA formyltransferase Fmt [Mycobacterium marinum M]
Length = 312
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 94/308 (30%), Positives = 147/308 (47%), Gaps = 6/308 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+ L L+ S H +++V T+P +GRRG K S V + A E +P
Sbjct: 1 MRLVFAGTPETALPALHQLIDSPRHDVIAVLTRPDAASGRRG-KPEPSPVARAALERDIP 59
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGL-VIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P++ E+ LS A V ++ +L G+ N H SLLP WRGAA
Sbjct: 60 VLRPSRPNSAEFVAELSELAPQCCAVVAYGALLGDALLGVPPQGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG +++ LD+GPV + I L L+V A +
Sbjct: 120 PVQAAIAAGDAVTGATTFQIEPSLDSGPVYGVVTETIRPTDTAGDLLGRLAVSGAELLSA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + + L PQ +G+T A KIS + RV + A + IRA++P PGAW +
Sbjct: 180 TLDGIAEGALTARPQPADGVTLAPKISVEQARVRWELPAPIIERRIRAVTPNPGAWTLIG 239
Query: 241 IGNKHERIKLLESQL-VEGEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
L++ + G PG +V + + +R+ ++Q G ++++ D+
Sbjct: 240 DLRVKLGPVYLDAAVKPPGPLPPGAIQVDRKHVWVGTGSEPLRLGQVQPPGKKLMNAADW 299
Query: 298 LLGCPVII 305
G +
Sbjct: 300 ARGARLDP 307
>gi|222529032|ref|YP_002572914.1| methionyl-tRNA formyltransferase [Caldicellulosiruptor bescii DSM
6725]
gi|222455879|gb|ACM60141.1| methionyl-tRNA formyltransferase [Caldicellulosiruptor bescii DSM
6725]
Length = 309
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 101/315 (32%), Positives = 157/315 (49%), Gaps = 20/315 (6%)
Query: 8 MGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MGT +FAV LQ L+ ++ V TQP +P G R AV + AQ+ + P
Sbjct: 1 MGTPDFAVDILQKLIQEPFVNLKLVVTQPDKPVG-RKRILTAPAVKEFAQKVGKDVVQPE 59
Query: 67 KLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
KL E N D VVVAYG ++P+ +L K G N HASLLP +RGAAPIQR
Sbjct: 60 KLKNNEEFFELLKEINPDTIVVVAYGKILPKEVLEIPKYGCINVHASLLPEYRGAAPIQR 119
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
+M G TGI IMKMD+ LDTG + +KV I ++ + L ++L+ + + ++E +
Sbjct: 120 VLMDGKEYTGITIMKMDEGLDTGDILLQKKVKIENDDDILTLSKKLAEVGSQLLIETLRN 179
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
+E Q + TYA I K E +++ SA+ ++N RAL +PG +
Sbjct: 180 IENI--TPVKQDHSRATYAPPIKKEEGNIDWNMSAKEIYNRFRALKIWPGIFTTFKG--- 234
Query: 245 HERIKLLESQLVEGE----------GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ +K+ + ++ + G E+ + + I G +R+ LQ GG+ +
Sbjct: 235 -KLLKIHDIEIAQDNKDNINSNVPNGTVVEIDDSSIIIKVRDGLIRLKLLQLEGGKKIGA 293
Query: 295 GDFLLGCPVIIGCIV 309
DF+ G + G ++
Sbjct: 294 RDFVNGYKIKKGDVL 308
>gi|317124744|ref|YP_004098856.1| methionyl-tRNA formyltransferase [Intrasporangium calvum DSM 43043]
gi|315588832|gb|ADU48129.1| methionyl-tRNA formyltransferase [Intrasporangium calvum DSM 43043]
Length = 314
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 111/318 (34%), Positives = 158/318 (49%), Gaps = 15/318 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVF GT + AV +L A+ +S H +V V T+P AG RG + S V +A+E LP
Sbjct: 1 MRVVFAGTPQVAVPSLDAIAASPHELVGVITRPDAVAG-RGRRLEASPVRARAEELGLPV 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
LVPT L E+ L D VVAYG +IPQ L G+ N H SLLP WRGAAP
Sbjct: 60 LVPTSLRDPEFLDALRRLAPDACAVVAYGNLIPQVALELPSQGWVNLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q AI+AGD TG + ++++ LDTGPV + I L LS A +V
Sbjct: 120 VQHAIIAGDEVTGASTFRLERGLDTGPVYGVMTERIRPTDTAGELLDRLSTAGAELLVAT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D +E L PQ +G++ A K+ + +++ R A + +R +P PGAW
Sbjct: 180 LDGIEAGELVAEPQPLDGVSLAPKLETEDAHIDWTRPALAIDRLVRGCTPAPGAWTTF-- 237
Query: 242 GNKHERIKLLESQLVEGEGKP-------GE--VINPNFTIACSQGAVRIMRLQRAGGRVL 292
+ ER+K+ +V P GE V+ + + VR+ +Q G R +
Sbjct: 238 --RGERLKVAPVTVVSPGELPDGSTVATGELLVMRKAVFVGTATSPVRLGSVQGHGRRPM 295
Query: 293 DIGDFLLGCPVIIGCIVG 310
D+ G V +G VG
Sbjct: 296 PAPDWARGVRVALGERVG 313
>gi|302338170|ref|YP_003803376.1| methionyl-tRNA formyltransferase [Spirochaeta smaragdinae DSM
11293]
gi|301635355|gb|ADK80782.1| methionyl-tRNA formyltransferase [Spirochaeta smaragdinae DSM
11293]
Length = 315
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 140/314 (44%), Gaps = 8/314 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS--L 60
+RV+F GT E AV +L+AL+ S+H + V T P RP G RG S V + + +
Sbjct: 1 MRVLFAGTPEIAVPSLKALLFSNHQLCGVLTNPDRPRG-RGRAPSPSPVKQALLDSGKPI 59
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L L E E + DV V A+G + + L G N H SLLPR RG +
Sbjct: 60 PLLQFEHLKGEAREAVAALKPDVLAVFAFGRIFGPKFLALFSQGGINVHPSLLPRHRGPS 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI++GD ++GI I ++ + +D G V ++ TA L + A +V
Sbjct: 120 PIPAAILSGDEKSGITIQRLAREMDKGAVLSRLVRDLNGRETTASLSAWAAEEGARLLVS 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D LE+ L Q E +Y+EKI ++ +++ A + +RA +P+P +
Sbjct: 180 TLDALERGELTEEEQDEVFASYSEKIDADDSLIDWNLPAVQIDRMVRAFNPWPRTRTSLE 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEV----INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + + PG + + G + ++RLQ + LD
Sbjct: 240 G-KELLILDSCPLPAEKSPSAPGTIAGVDRKRGILVQTGDGLLAVVRLQLKTKKPLDFAS 298
Query: 297 FLLGCPVIIGCIVG 310
F G I G +G
Sbjct: 299 FYNGNRDIAGKRLG 312
>gi|299136399|ref|ZP_07029582.1| methionyl-tRNA formyltransferase [Acidobacterium sp. MP5ACTX8]
gi|298600914|gb|EFI57069.1| methionyl-tRNA formyltransferase [Acidobacterium sp. MP5ACTX8]
Length = 311
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 90/315 (28%), Positives = 157/315 (49%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VF GT EFAV TL+A++ + H + V TQP RPAG R ++ + V + A + L
Sbjct: 1 MKLVFCGTPEFAVPTLRAVLDAGHEVALVLTQPDRPAG-RKMELQVPPVKRLALQRGLRV 59
Query: 63 LVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P ++ ++ D +VVAYG +IP +L + G N H SLLP++RGAA
Sbjct: 60 LQPERIKSDQELRGTLEGIQPDAILVVAYGRIIPGWMLELPRFGNINLHGSLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A+ G+ ETG+ M++D LDTG + ++PI + L +LS + +++
Sbjct: 120 PIQWAVAKGETETGVTTMRLDAGLDTGDMLLEERIPIGPDTTATELFAQLSHVGVEVVLQ 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVN-FCRSAENVHNHIRALSPFPGAWLEM 239
+D L + L PQ + T A +++ + +++ R+A+ +N R P+PGA +
Sbjct: 180 TLDGLAKGTLTGRPQNHDEATLAPLLTREDGKLDLAHRTAQEAYNRWRGFYPWPGAHATL 239
Query: 240 MIGNKHERIKLLESQLVEGEGK--PGEVI--NPNFTIACSQGAVRIM-RLQRAGGRVLDI 294
+R + + K PGE+ + ++ + ++ +Q G L
Sbjct: 240 ----HGKRFLVHRMHPSSADLKLVPGELDWSTGELLVGAAEETLLVLDEVQLEGKPRLAG 295
Query: 295 GDFLLGCPVIIGCIV 309
+F+ + G +
Sbjct: 296 INFVRDFQLHAGEHL 310
>gi|317011339|gb|ADU85086.1| methionyl-tRNA formyltransferase [Helicobacter pylori SouthAfrica7]
Length = 305
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 84/312 (26%), Positives = 145/312 (46%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH---SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
+R+VFMGT FA L+AL+ + +V ++TQ +P G R + E
Sbjct: 1 MRIVFMGTPGFAEVILKALMENKDNDMEVVGLFTQKDKPFG-RKKELKAPETKTYILENH 59
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
++P P L + E + S D VVVAYG ++P+ +L N HASLLP++R
Sbjct: 60 SNIPIFQPQSLKEPEVQILKSLKPDFIVVVAYGKILPKEVLKIA--PCINVHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PI I+ D GI+ + MD LD+G + ++ L +L+ + A
Sbjct: 118 GASPIHEMILNDDRIYGISTILMDLELDSGDILESASFLREDYLDLETLSLKLAHMGATL 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
++ + +++ PQ T+ +KI+K + V F + + S +
Sbjct: 178 LLSTLKN--FHSITRKPQDHMSATFCKKIAKADGLVGFKDAKSLFLKSLAFKS---WPEI 232
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ K + L+E++ EG+ ++ + C +G+VR+ RLQ G + L D+
Sbjct: 233 FLENNLKLLEVGLVENEKSHKEGEILKIDEKGVLVGCLKGSVRVERLQAVGKKPLKAKDY 292
Query: 298 LLGCPVIIGCIV 309
L G + +G I+
Sbjct: 293 LNGRRLKVGDIL 304
>gi|229552471|ref|ZP_04441196.1| methionyl-tRNA formyltransferase [Lactobacillus rhamnosus LMS2-1]
gi|229314208|gb|EEN80181.1| methionyl-tRNA formyltransferase [Lactobacillus rhamnosus LMS2-1]
Length = 340
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 97/313 (30%), Positives = 154/313 (49%), Gaps = 14/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT +FAV L+ L++ + +V+V TQP R G R K S V + A ++P L
Sbjct: 26 VIFLGTPDFAVPILEGLIAQHYDVVAVMTQPDRKVG-RKQKLAASPVKQAAVAHNIPVLQ 84
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G E Q ++ D+ V AYG +P + L A K+ N H SLLP++RG APIQ
Sbjct: 85 PEKLSGSPELAQAIALAPDLIVTAAYGQFLPTKFLQAAKIAAVNVHGSLLPKYRGGAPIQ 144
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+I+ GD ETG+ I++M K +D G + K+P++ +T + +LS+L ++ +
Sbjct: 145 YSIINGDAETGVTIIEMVKKMDAGDMFAQAKLPLTRQDDTGTVFAKLSLLGRDLLLATLP 204
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ +PQ +T+A I+K + ++ SA + +R L P G ++ M
Sbjct: 205 KIIDQTAIRTPQDPEKVTFAPTITKEQEHLDIHLSARALDQWVRGLRPEVGGYVYM---- 260
Query: 244 KHERIKLLESQL--VEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+R KL G V+ IA + + +I LQ AG I D+
Sbjct: 261 NGQRTKLWAITPLTATTNLPAGSVVARSKHQLVIAAGKQSTFQIDELQPAGKSKQHIADY 320
Query: 298 LL--GCPVIIGCI 308
L G + +G
Sbjct: 321 LNGPGRDLTVGQQ 333
>gi|323440991|gb|EGA98698.1| methionyl-tRNA formyltransferase [Staphylococcus aureus O11]
gi|323442307|gb|EGA99937.1| methionyl-tRNA formyltransferase [Staphylococcus aureus O46]
Length = 305
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 106/310 (34%), Positives = 163/310 (52%), Gaps = 14/310 (4%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +F+ L+ L+ + H +++V TQP RP G R V K A ++ LP P K
Sbjct: 1 MGTPDFSTTVLEMLI-AEHDVIAVVTQPDRPVG-RKRVMTPPPVKKVAMKYDLPVYQPEK 58
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
G EE EQ L + D+ V A+G ++P+ +L KLG N HASLLP++RG API +AI
Sbjct: 59 LSGSEELEQLLQLDVDLIVTAAFGQLLPESLLALPKLGAINVHASLLPKYRGGAPIHQAI 118
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ G+ ETGI IM M K LD G + + + I N N + +LSVL A + E + +
Sbjct: 119 IDGEQETGITIMYMIKKLDAGNIISQQAIKIEENDNVGTMHDKLSVLGADLLKETLPSII 178
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ PQ + T+A I + + R+++ + V N IR LSP+P A+ M N
Sbjct: 179 EGTNESVPQDDTQATFASNIRREDERISWNKPGRQVFNQIRGLSPWPVAYTTMDDTN--- 235
Query: 247 RIKLLESQLVEGE--GKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLLG 300
+K+ +++LVE +PG +I +A + AV I +Q AG + + ++L G
Sbjct: 236 -LKIYDAELVETNKINEPGTIIETTKKAIIVATNDNEAVAIKDMQLAGKKRMLAANYLSG 294
Query: 301 CPVI-IGCIV 309
+G +
Sbjct: 295 AQNTLVGKKL 304
>gi|289433372|ref|YP_003463245.1| methionyl-tRNA formyltransferase [Dehalococcoides sp. GT]
gi|288947092|gb|ADC74789.1| methionyl-tRNA formyltransferase [Dehalococcoides sp. GT]
Length = 315
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 101/315 (32%), Positives = 153/315 (48%), Gaps = 12/315 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VFMG+ EFA+ L+ L++ + I VYTQP RPAG RG + V A E L
Sbjct: 6 KLKMVFMGSPEFALTPLKMLLAEGYDICGVYTQPDRPAG-RGRELCPPPVKTLALEHGLA 64
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L + E + FL DV VV AYGL++PQ +L+ G N H SLLPR+RGA
Sbjct: 65 VYQPQSLKKPEEQAFLKELKPDVIVVAAYGLILPQEVLDIPVYGVLNIHPSLLPRYRGAT 124
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ ++ GD G+++MK++ LDTGPV V I T L +L+ + ++E
Sbjct: 125 PVAATLLGGDEWAGVSLMKLEAGLDTGPVYSRSMVAIRPEDTTPILADKLAFIGGCMLLE 184
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ P Q +Y ++K +N+ SA + +RA P+PG +
Sbjct: 185 LLSQIPSLPEPKV-QDNTQASYFGMVTKEMGLINWQTSAVEIERRVRAFFPWPGVFTTF- 242
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ +K+LE++ KP EV + + G + I+RLQ G
Sbjct: 243 ---NQKTLKILEAKPRNLGLGLKPSEVRVYEQSRVMVGSASGELEIIRLQLEGKAGCSAA 299
Query: 296 DFLLGCPVIIGCIVG 310
DF+ G G +G
Sbjct: 300 DFVRGQRNFDGVNLG 314
>gi|255321970|ref|ZP_05363120.1| methionyl-tRNA formyltransferase [Campylobacter showae RM3277]
gi|255301074|gb|EET80341.1| methionyl-tRNA formyltransferase [Campylobacter showae RM3277]
Length = 306
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 12/311 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--SL 60
+ +VFMGT E+A L AL + I +V+TQP +P G R S V AQ+ ++
Sbjct: 1 MNIVFMGTPEYAAKILCALTVAKFEIAAVFTQPDKPVG-RKQILTPSEVKVYAQKHLPAV 59
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P P L E + +VVA I + + N HAS+LP++RGA+
Sbjct: 60 PIFQPATLKDEAVAAQIKELKPDFIVVAAYGKILPQSV-LDIAPCINLHASILPKYRGAS 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI+AG+ +TG+ M MD LDTG + P + + +
Sbjct: 119 PIQSAILAGEKQTGVTAMLMDAGLDTGDMLDFAYTPCEDKTAAQLFDELGDLAGELIVRV 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ NL Q T+ +KISK + F +SAE ++N RAL+P+PG + +
Sbjct: 179 LQNFA---NLKPLKQDGTQATHCKKISKSDGLFGFEQSAEQIYNKFRALTPWPGIY--LA 233
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
G K +++L + GE++ F ++C +GAV+I+++Q G R ++ +
Sbjct: 234 SGLKILDLEILRESCGRKFQRTGEILHVDKLGFCVSCGEGAVKIIKVQEPGKRPVEASAY 293
Query: 298 LLGCPVIIGCI 308
L G + IG I
Sbjct: 294 LNGKRLGIGDI 304
>gi|312797601|ref|YP_004030523.1| methionyl-tRNA formyltransferase [Burkholderia rhizoxinica HKI 454]
gi|312169376|emb|CBW76379.1| Methionyl-tRNA formyltransferase (EC 2.1.2.9) [Burkholderia
rhizoxinica HKI 454]
Length = 341
Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 120/324 (37%), Positives = 169/324 (52%), Gaps = 21/324 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLRV+F GT FA LQA+ + ++ V TQP R AG RG+KS S V + A L
Sbjct: 8 TLRVIFAGTPPFAATALQAIHDAGFAVPLVLTQPDRAAG-RGMKSSSSPVKQLALARELA 66
Query: 62 ALVPTKLGQEEYEQFLSF---------NADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + + DV VV AYGL++PQ +L+ G N HASL
Sbjct: 67 LAQPPSLRCDGKYPTEAADALALLHATPHDVMVVAAYGLLLPQAVLDIAPHGCINIHASL 126
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD TG+ +M+MD LDTGP+ V I T L +L+V
Sbjct: 127 LPRWRGAAPIHRAIEAGDRVTGVTLMQMDAGLDTGPMLMREAVAIEPTDTTGTLHDKLAV 186
Query: 173 LCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A +V + +LE+ P++PQ GITYA K+SK E +++ A+ + +RA P
Sbjct: 187 TGARLIVAGLRELERTGSLPVTPQPSEGITYAHKLSKQEAALDWRLPADVLACKVRAFDP 246
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEG---KPGEVI---NPNFTIACSQGAVRIMRLQ 285
FP A + +K+ ++ V G PG ++ + TIAC + A+ +LQ
Sbjct: 247 FPAAHGILEGTP----LKIWAAEPVRAGGTGLTPGTILAVDSAGVTIACGEHALLATQLQ 302
Query: 286 RAGGRVLDIGDFLLGCPVIIGCIV 309
+ GG+ L +F+ G P+ +G
Sbjct: 303 KPGGKRLAAREFVAGFPLRVGQRF 326
>gi|296170732|ref|ZP_06852305.1| methionyl-tRNA formyltransferase [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894615|gb|EFG74351.1| methionyl-tRNA formyltransferase [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 312
Score = 143 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 96/309 (31%), Positives = 150/309 (48%), Gaps = 6/309 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M +R+VF GT E A+ L+ L+ S H +++V T+P GR G K S V ++A E
Sbjct: 1 MPVRLVFAGTPEPALPALRRLLDSPRHEVIAVLTRPDAAVGRHG-KPQPSPVAREALERG 59
Query: 60 LPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P + +E+ LS D VVAYG ++ +L G+ N H SLLP WRG
Sbjct: 60 IPLLRPARPNADEFVAELSALAPDCCAVVAYGALLRDGLLGVPPHGWINLHFSLLPAWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+Q AI AGD TG +++ LD+GP+ + I L + L+V A +
Sbjct: 120 AAPVQAAIAAGDTITGATTFRIEPSLDSGPIYGVVTETIRPTDTAGELLERLAVSGAALL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+D + L PQ +G++ A KI+ + RV + A V IR+++P PGAW
Sbjct: 180 STTLDGIADRTLTPRPQPADGVSIAPKITVEQARVRWDLPALVVERRIRSVTPNPGAWTL 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ++ E PG + + I AVR+ ++Q G ++++ D
Sbjct: 240 IGDARIKVGPLQIDPDAPEP-LAPGAIHVGRKHVWIGTGSQAVRLGQIQPPGKKLMNAVD 298
Query: 297 FLLGCPVII 305
+ G +
Sbjct: 299 WARGARLDP 307
>gi|323699399|ref|ZP_08111311.1| methionyl-tRNA formyltransferase [Desulfovibrio sp. ND132]
gi|323459331|gb|EGB15196.1| methionyl-tRNA formyltransferase [Desulfovibrio desulfuricans
ND132]
Length = 333
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 114/310 (36%), Positives = 164/310 (52%), Gaps = 12/310 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
LRVVFMGT +FA L+ L+ +V+ YTQP RP G RG + SAV + A E +
Sbjct: 21 PLRVVFMGTPDFAAEALEILLKFDAAQVVAAYTQPDRPCG-RGRQCTPSAVKRVALEHGI 79
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P L+ DV VV AYGL++PQ +L+ + N HASLLP WRGA
Sbjct: 80 PVLQPVNFKDPADVAELAALAPDVLVVAAYGLILPQSVLDIPAILPLNIHASLLPHWRGA 139
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRA+ GD TGI+IMKM+ LDTGPV R + I N + + EL+ L +
Sbjct: 140 APIQRAVENGDVVTGISIMKMEAGLDTGPVMVQRALRIGHNDHAGTIHDELAKLGGICIC 199
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EA+ +L+ L PQ + TYA+K+ K E +++ R AE +HN IRA+ P+PGA+ +
Sbjct: 200 EALARLQTGAYDLKPQDDALATYAKKLEKKEGEIDWNRPAEAIHNQIRAMYPWPGAFFDW 259
Query: 240 MIGNKHE-RIKLLESQLVEGEG---KPGEVI---NPNFTIACSQGAVRIM-RLQRAGGRV 291
+ R+ + ++ E PG V+ + I + + + ++ G +
Sbjct: 260 TNPDGKVLRLLVTPGEISEESAPKVAPGTVLGEMDGKLAITTAD-RIYLTPEVKPQGKKG 318
Query: 292 LDIGDFLLGC 301
+D F G
Sbjct: 319 MDATAFTCGY 328
>gi|150020141|ref|YP_001305495.1| methionyl-tRNA formyltransferase [Thermosipho melanesiensis BI429]
gi|166215524|sp|A6LJK9|FMT_THEM4 RecName: Full=Methionyl-tRNA formyltransferase
gi|149792662|gb|ABR30110.1| methionyl-tRNA formyltransferase [Thermosipho melanesiensis BI429]
Length = 303
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 83/315 (26%), Positives = 147/315 (46%), Gaps = 22/315 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F+GT +FA L+ L+ + +V+V +QP +P G RG K + + V + A ++++P
Sbjct: 1 MRILFLGTPDFASVHLEFLMKNGFDVVAVISQPDKPKG-RGKKILPTPVKEVALKYNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P KL +E + + D+ +VVAYG ++ L FYN HASLLP +RGAAPI
Sbjct: 60 FQPKKLNKEGLKIIENLKPDIGIVVAYGKLLK--PPFLNTLEFYNVHASLLPSYRGAAPI 117
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QR + G+ TGI I K+ + +D GP+A ++V + L ++L L A+ +
Sbjct: 118 QRVLENGEKRTGITIFKIGEGMDDGPIALKKEVEVGEFETFGELYEKLLDLGKKAL---I 174
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ L + L PQ ++ + + + A+ +
Sbjct: 175 EFLNNYPIELIPQEGKVSF--------APKITKEDLKLDFSKDVTFVKNKIRAYDPLPGV 226
Query: 243 NKHERIKLLE-----SQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ K+++ S L + G++I I+C G+V++ +Q G R +
Sbjct: 227 RVLFKRKIVKLFGVFSVLENSSREIGKIISIDKEGALISCENGSVKVRYIQFPGKRKMTF 286
Query: 295 GDFLLGCPVIIGCIV 309
+ GC + G
Sbjct: 287 FEAKNGCLIKEGECF 301
>gi|239631986|ref|ZP_04675017.1| methionyl-tRNA formyltransferase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301066671|ref|YP_003788694.1| methionyl-tRNA formyltransferase [Lactobacillus casei str. Zhang]
gi|239526451|gb|EEQ65452.1| methionyl-tRNA formyltransferase [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300439078|gb|ADK18844.1| Methionyl-tRNA formyltransferase [Lactobacillus casei str. Zhang]
Length = 318
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 16/312 (5%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT EFAV L+ L++ + I++V TQP R G R + S V + AQ+ +P L
Sbjct: 4 VIFLGTPEFAVPILEGLIAQHYDILAVMTQPDRKVG-RKQRLAASPVKQAAQKHDIPVLQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G E Q ++ D+ V AYG +P + L A K+ N H SLLP++RG APIQ
Sbjct: 63 PEKLSGSPELTQAIAMAPDLIVTAAYGQFLPTKFLEAAKIIAVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+IM GD+ETG+ I++M K +D G + K+P++ +T + +LS+L ++E +
Sbjct: 123 YSIMNGDSETGVTIIEMVKKMDAGDMFAQAKLPLTRADDTGTVFAKLSLLGRDLLLETLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ +PQ + +T++ I+K + +N A+ + IRAL P G ++ +
Sbjct: 183 KIIAGTATRTPQDPDKVTFSPTITKEQEHLNIHLPAKALDQWIRALRPDVGGYVYL---- 238
Query: 244 KHERIKLLESQLVE--GEGKPGEVINPN----FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+R KL + G ++ + +A Q ++ LQ AG I DF
Sbjct: 239 NGQRTKLWAITPLSAGSTLPAGSIVERDKHRLVMVAGQQTTFQVDELQPAGKAKQSIADF 298
Query: 298 LLGCPVIIGCIV 309
L G G +
Sbjct: 299 LNG----PGQQL 306
>gi|294783438|ref|ZP_06748762.1| methionyl-tRNA formyltransferase [Fusobacterium sp. 1_1_41FAA]
gi|294480316|gb|EFG28093.1| methionyl-tRNA formyltransferase [Fusobacterium sp. 1_1_41FAA]
Length = 310
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 83/312 (26%), Positives = 160/312 (51%), Gaps = 8/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT FA+ +L+ L ++ + ++SV+T+ + RG K + S + A +L
Sbjct: 1 MKIIFMGTPTFALPSLEKL-NARYELLSVFTKIDK-VNARGNKIIYSPIKDFALANNLKI 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E+ + D+ VVVAYG ++P+ +L+ K G N H+SLLPR+RGAAP
Sbjct: 59 YQPENFKDSVLIEEIRAMEPDLIVVVAYGKILPKEVLDIPKYGVINLHSSLLPRFRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD+++G++IM +++ LD GPV ++ IS L L + A +VEA
Sbjct: 119 INAAIIHGDSKSGVSIMYVEEELDAGPVILQKETEISDEDTFLTLHDRLKNMGADLLVEA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ ++ N Q +N +T+ + K + ++++ +++ + N +R ++P P A+ +
Sbjct: 179 IELIKDNKAEPKVQDKNLVTFVKPFKKEDCKIDWTKTSREIFNFVRGMNPAPTAFSMLDK 238
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ + E GEV+ + + G++ I + + + D
Sbjct: 239 SIIKIYETIIYDKTYE-NASCGEVVEYLKGKGPVVKTADGSLIISSAKPENKKQISGVDL 297
Query: 298 LLGCPVIIGCIV 309
+ G + IG +
Sbjct: 298 INGKFLKIGEKL 309
>gi|297206189|ref|ZP_06923584.1| methionyl-tRNA formyltransferase [Lactobacillus jensenii JV-V16]
gi|297149315|gb|EFH29613.1| methionyl-tRNA formyltransferase [Lactobacillus jensenii JV-V16]
Length = 329
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 87/318 (27%), Positives = 164/318 (51%), Gaps = 14/318 (4%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M + V+F+GT F L+ L+ ++ +++V TQP + G R K S V + AQ++
Sbjct: 14 MNMTSVIFLGTPNFGATVLEGLIKDNYQVLAVVTQPDKKVG-RKQKLTSSPVKEMAQKYD 72
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP P + EE + ++ +AD+ + AYG +P + L + K+ N H SLLP++RG
Sbjct: 73 LPVYQPARLPRSEELDTLINLHADLIITAAYGQFLPTKFLKSAKIAAVNVHGSLLPKYRG 132
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
APIQ +++ GD ETG+ IM+M K +D G + K+PI+ L +++++L +
Sbjct: 133 GAPIQYSLINGDKETGVTIMEMVKEMDAGDMYAQEKLPIAPEDTAGSLFEKMAILGRDLL 192
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + + + Q + ++ ISK + R+ +A VHN IR L+P PGA+L
Sbjct: 193 LKTLPSIIDGSCDKKAQDTTKVVFSPNISKDQERITKDMTASQVHNLIRGLNPDPGAYLM 252
Query: 239 MMIGNKHERIKLLESQLVEGEGK--PGEVINPNFTIA---CSQGAVRIMRLQRAGGRVLD 293
+ +R+K+ S++ + G +++ + A + + + +Q G + +
Sbjct: 253 I----NGQRMKVWSSEVANETTQLPAGALVDNHKRFAVSFANHTVLNLTEIQPTGKKKMA 308
Query: 294 IGDFLL--GCPVIIGCIV 309
D++ G + +G +
Sbjct: 309 GRDYMNGKGASLKLGEVF 326
>gi|94986390|ref|YP_605754.1| methionyl-tRNA formyltransferase [Deinococcus geothermalis DSM
11300]
gi|94556671|gb|ABF46585.1| methionyl-tRNA formyltransferase [Deinococcus geothermalis DSM
11300]
Length = 319
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 104/289 (35%), Positives = 147/289 (50%), Gaps = 13/289 (4%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
RV F G+ FA+ L+A+ +V V TQP +P G RGLK V +A E LP
Sbjct: 5 RVAFFGSPAFALPVLEAIRE-HFEVVLVVTQPDKPVG-RGLKLTPPPVAARAAELGLPLA 62
Query: 64 VPTKLGQE--EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P +L Q + ADVAV AYG ++P +L + GF N H SLLP +RGAAP
Sbjct: 63 QPKRLRGNVAFEAQLRASGADVAVTCAYGKMLPASLLAVPRFGFLNTHTSLLPAYRGAAP 122
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ G+ TG IM+ D +DTGP+ ++PI+ + L + LSV A +VEA
Sbjct: 123 IQWALIRGETVTGTTIMQTDAGMDTGPILLQEELPIAPEWTSIELAEALSVQAARLIVEA 182
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L PQ E T A + K + V + SA V N R ++ +P +
Sbjct: 183 LLHLPDL--TPVPQDETWATSAPMLVKEDGFVRWQESALAVVNRYRGVAAWPQTTAFLQG 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRA 287
R+KL + G+G+PGEV+ T+AC +GAVR+ +Q
Sbjct: 241 A----RLKLAGLSVTNGQGQPGEVLRVDEEGLTVACGEGAVRVQTVQPE 285
>gi|227530539|ref|ZP_03960588.1| methionyl-tRNA formyltransferase [Lactobacillus vaginalis ATCC
49540]
gi|227349545|gb|EEJ39836.1| methionyl-tRNA formyltransferase [Lactobacillus vaginalis ATCC
49540]
Length = 310
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 91/310 (29%), Positives = 161/310 (51%), Gaps = 14/310 (4%)
Query: 8 MGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MGT EFAV LQ+L+ + + + +V TQP G R S V K A E + L P
Sbjct: 1 MGTPEFAVPILQSLIDAPEYDVKAVLTQPDHRVG-RKHVLTPSPVKKLAVENQIKVLQPA 59
Query: 67 K-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
K G +E + + + D+ + AYG +P ++L+A ++ N H SLLP++RG AP+Q +
Sbjct: 60 KLSGSQEMTEIIELHPDLLITAAYGQFLPTKLLDAAQIAAINVHGSLLPKYRGGAPVQYS 119
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
I+ GD ETG+ IM M K +D G + R +PI + + + ++LS+L +++ + L
Sbjct: 120 IINGDRETGVTIMYMVKKMDAGDMISQRAIPIEPDDDNGTMFKKLSILGRDLLLDTLPDL 179
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKH 245
N+ Q +T++ IS + ++++ SA+ + + +R L P P +++
Sbjct: 180 ISGNVKPQKQDPEKVTFSPNISSEQEKIDYTMSAQQIDDKVRGLRPAPIGNMKI----DG 235
Query: 246 ERIKLLESQLV--EGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLL 299
R K+ + + + E +PG+V+ + IA +G +I L+ AG + ++I +L
Sbjct: 236 LRTKIYDVTPLTEKTELEPGKVVRIDKHHLVIAAGKGTTYQINELKPAGKQKMNITAYLN 295
Query: 300 GCP-VIIGCI 308
G + G
Sbjct: 296 GHQNIKEGMQ 305
>gi|227534878|ref|ZP_03964927.1| methionyl-tRNA formyltransferase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227187634|gb|EEI67701.1| methionyl-tRNA formyltransferase [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 343
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 16/312 (5%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT EFAV L+ L++ + I++V TQP R G R + S V + AQ+ +P L
Sbjct: 29 VIFLGTPEFAVPILEGLIAQHYDILAVMTQPDRKVG-RKQRLAASPVKQAAQKHDIPVLQ 87
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G E Q ++ D+ V AYG +P + L A K+ N H SLLP++RG APIQ
Sbjct: 88 PEKLSGSPELAQAIAMAPDLIVTAAYGQFLPTKFLEAAKIIAVNVHGSLLPKYRGGAPIQ 147
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+IM GD+ETG+ I++M K +D G + K+P++ +T + +LS+L ++E +
Sbjct: 148 YSIMNGDSETGVTIIEMVKKMDAGDMFAQAKLPLTRADDTGTVFAKLSLLGRDLLLETLP 207
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ +PQ + +T++ I+K + +N A+ + IRAL P G ++ +
Sbjct: 208 KIIAGTATRTPQDPDKVTFSPTITKEQEHLNIHLPAKALDQWIRALRPDVGGYVYL---- 263
Query: 244 KHERIKLLESQLVE--GEGKPGEVINPN----FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+R KL + G ++ + +A Q ++ LQ AG I DF
Sbjct: 264 NGQRTKLWAITPLSAGSTLPAGSIVERDKHRLVMVAGQQTTFQVDELQPAGKAKQSIADF 323
Query: 298 LLGCPVIIGCIV 309
L G G +
Sbjct: 324 LNG----PGQQL 331
>gi|191638612|ref|YP_001987778.1| Methionyl-tRNA formyltransferase [Lactobacillus casei BL23]
gi|229487498|sp|B3WEW9|FMT_LACCB RecName: Full=Methionyl-tRNA formyltransferase
gi|190712914|emb|CAQ66920.1| Methionyl-tRNA formyltransferase [Lactobacillus casei BL23]
gi|327382654|gb|AEA54130.1| Methionyl-tRNA formyltransferase [Lactobacillus casei LC2W]
gi|327385848|gb|AEA57322.1| Methionyl-tRNA formyltransferase [Lactobacillus casei BD-II]
Length = 318
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 16/312 (5%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT EFAV L+ L++ + I++V TQP R G R + S V + AQ+ +P L
Sbjct: 4 VIFLGTPEFAVPILEGLIAQHYDILAVMTQPDRKVG-RKQRLAASPVKQAAQKHDIPVLQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G E Q ++ D+ V AYG +P + L A K+ N H SLLP++RG APIQ
Sbjct: 63 PEKLSGSPELAQAIAMAPDLIVTAAYGQFLPTKFLEAAKIIAVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+IM GD+ETG+ I++M K +D G + K+P++ +T + +LS+L ++E +
Sbjct: 123 YSIMNGDSETGVTIIEMVKKMDAGDMFAQAKLPLTRADDTGTVFAKLSLLGRDLLLETLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ +PQ + +T++ I+K + +N A+ + IRAL P G ++ +
Sbjct: 183 KIIAGTATRTPQDPDKVTFSPTITKEQEHLNIHLPAKALDQWIRALRPDVGGYVYL---- 238
Query: 244 KHERIKLLESQLVE--GEGKPGEVINPN----FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+R KL + G ++ + +A Q ++ LQ AG I DF
Sbjct: 239 NGQRTKLWAITPLSAGSTLPAGSIVERDKHRLVMVAGQQTTFQVDELQPAGKAKQSIADF 298
Query: 298 LLGCPVIIGCIV 309
L G G +
Sbjct: 299 LNG----PGQQL 306
>gi|325283927|ref|YP_004256468.1| Methionyl-tRNA formyltransferase [Deinococcus proteolyticus MRP]
gi|324315736|gb|ADY26851.1| Methionyl-tRNA formyltransferase [Deinococcus proteolyticus MRP]
Length = 330
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 102/312 (32%), Positives = 149/312 (47%), Gaps = 14/312 (4%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
RV F G+ FAV L+AL ++ +V V +QP +P G RGL+ V +A E LP
Sbjct: 17 RVAFFGSPAFAVPVLEALHAA-FEVVLVVSQPDKPVG-RGLRLTPPPVAARAAELGLPLA 74
Query: 64 VPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P KL + A+VAV AYG ++PQ +L+ F N H SLLPRWRGAAP
Sbjct: 75 QPRKLRGNDEFAALLRESGAEVAVTCAYGKLLPQSLLDTLPYEFLNTHTSLLPRWRGAAP 134
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++ GD TG IM+ D +DTGPV ++PI+ + L LS A V+
Sbjct: 135 IQWALIHGDTVTGTTIMQTDAGMDTGPVLRQEELPIAPHWTALELSAALSEQAARLAVQV 194
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ E+ L PQ T+A ++K + V + A N R ++ +P +
Sbjct: 195 V--GERPGLTPQPQDHAQATHAPLLTKEDGFVRWNDPATATVNRYRGVAAWPQTTAFLGG 252
Query: 242 GNKHERIKLLESQLVE-GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
R+KL + G G+PG V++ T+A +GAV+I +Q A + +
Sbjct: 253 ----VRLKLDGLSVAPSGSGEPGTVLDMSGDTLTVASGEGAVQIRTVQPASKKPQPAAAW 308
Query: 298 LLGCPVIIGCIV 309
+ G
Sbjct: 309 AAAQGLRPGSRF 320
>gi|300173592|ref|YP_003772758.1| methionyl-tRNA formyltransferase [Leuconostoc gasicomitatum LMG
18811]
gi|299887971|emb|CBL91939.1| Methionyl-tRNA formyltransferase [Leuconostoc gasicomitatum LMG
18811]
Length = 322
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 100/318 (31%), Positives = 164/318 (51%), Gaps = 16/318 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT VV MGT +FAV L+AL+ + + +V TQP +P G R S V A +
Sbjct: 1 MTYSVVLMGTPQFAVPILEALIADDKYDVKAVVTQPDKPQG-RKHVLKPSPVKVAALAHN 59
Query: 60 LPALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP L P K+ ++ +Q ++ N D V A+G +P ++L A K+ N HASLLP++RG
Sbjct: 60 LPVLQPEKISGSDDMQQIIALNPDFIVTAAFGQFLPDKLLEAAKIAAVNTHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP+ AIM GD ETG++IM M K +D G + + KVPI++ N + +LS+ +
Sbjct: 120 GAPVHYAIMNGDTETGVSIMHMVKKMDAGDIIDVVKVPITNQDNVGTMFDKLSLAGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFC-RSAENVHNHIRALSPFPGAWL 237
+ + K+ ++ Q +N ++++ I +NF +A+ + H+R L P A +
Sbjct: 180 LANLPKIATGDISPVKQNDNDVSFSPNIPHHMQNLNFTSETAQQIDWHLRGLYPTHPAHV 239
Query: 238 EMMIGNKHERIKLLESQLVE--GEGKPGEVINP---NFTIACSQGAVR-IMRLQRAGGRV 291
++ +R+KL++ ++ + G V+ I+ + V I RLQ AG
Sbjct: 240 QVAG----QRVKLIKVTPLDEKTDLSAGHVVEKTKRQLKISAADQTVVSIDRLQPAGKSE 295
Query: 292 LDIGDFLL--GCPVIIGC 307
+DI +L G + G
Sbjct: 296 MDIVAYLNGAGNQLQTGD 313
>gi|327405557|ref|YP_004346395.1| methionyl-tRNA formyltransferase [Fluviicola taffensis DSM 16823]
gi|327321065|gb|AEA45557.1| methionyl-tRNA formyltransferase [Fluviicola taffensis DSM 16823]
Length = 319
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 84/307 (27%), Positives = 149/307 (48%), Gaps = 8/307 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT F+V L+A+ + ++V + T +PAG RG S V + + ++P
Sbjct: 5 LRIVFMGTPHFSVGILEAIQRAELNLVGIVTVADKPAG-RGQLMHESPVKQFGVQHNIPV 63
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL ++++ L VV ++P + G +N HASLLP +RGAAPI
Sbjct: 64 LQPLKLKDADFQKELKTLNADVFVVVAFRMLPAEVWKMPAKGTFNLHASLLPDYRGAAPI 123
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
I+ GD+ETG++ +D+ +DTG V +PIS N + L + + +VE++
Sbjct: 124 NWTIINGDSETGLSTFFIDEEIDTGNVIQQIHMPISENESAGQLHDRMILEGGRLVVESL 183
Query: 183 DKLEQNNLPLSPQI---ENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + +++ PQ + A K+ K T++++ + +HN +R L+P+P AW
Sbjct: 184 NNIATDSVKPIPQSEFTHSLKRPAPKLFKENTKIDWKANPATIHNLVRGLNPYPAAWTTW 243
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEV----INPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + S L+ E G + + + + I+ Q G + +
Sbjct: 244 KNAKGESKNIKVFSTLISEELGAGTLQFTSTKTQLLVDTTGKKLEIVEFQVEGKKKMTAK 303
Query: 296 DFLLGCP 302
++L+G
Sbjct: 304 EWLVGNN 310
>gi|15608544|ref|NP_215922.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis H37Rv]
gi|15840864|ref|NP_335901.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis
CDC1551]
gi|31792600|ref|NP_855093.1| methionyl-tRNA formyltransferase [Mycobacterium bovis AF2122/97]
gi|121637336|ref|YP_977559.1| methionyl-tRNA formyltransferase [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148661197|ref|YP_001282720.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis H37Ra]
gi|148822626|ref|YP_001287380.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis F11]
gi|167968445|ref|ZP_02550722.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis H37Ra]
gi|215411051|ref|ZP_03419859.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis
94_M4241A]
gi|215426743|ref|ZP_03424662.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis T92]
gi|215430292|ref|ZP_03428211.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis
EAS054]
gi|218753115|ref|ZP_03531911.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis GM
1503]
gi|219557309|ref|ZP_03536385.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis T17]
gi|224989811|ref|YP_002644498.1| methionyl-tRNA formyltransferase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253799544|ref|YP_003032545.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
KZN 1435]
gi|254364289|ref|ZP_04980335.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
str. Haarlem]
gi|254550420|ref|ZP_05140867.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260186345|ref|ZP_05763819.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis
CPHL_A]
gi|260200461|ref|ZP_05767952.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis T46]
gi|260204671|ref|ZP_05772162.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis K85]
gi|289442851|ref|ZP_06432595.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis T46]
gi|289447002|ref|ZP_06436746.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
CPHL_A]
gi|289554803|ref|ZP_06444013.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
KZN 605]
gi|289569423|ref|ZP_06449650.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
T17]
gi|289574075|ref|ZP_06454302.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
K85]
gi|289749964|ref|ZP_06509342.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
T92]
gi|289753487|ref|ZP_06512865.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis
EAS054]
gi|289761565|ref|ZP_06520943.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis GM
1503]
gi|294994968|ref|ZP_06800659.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis 210]
gi|297633962|ref|ZP_06951742.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis KZN
4207]
gi|297730951|ref|ZP_06960069.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis KZN
R506]
gi|298524912|ref|ZP_07012321.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis
94_M4241A]
gi|306775589|ref|ZP_07413926.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu001]
gi|306780737|ref|ZP_07419074.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu002]
gi|306784136|ref|ZP_07422458.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu003]
gi|306788506|ref|ZP_07426828.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu004]
gi|306792829|ref|ZP_07431131.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu005]
gi|306797228|ref|ZP_07435530.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu006]
gi|306803110|ref|ZP_07439778.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu008]
gi|306807306|ref|ZP_07443974.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu007]
gi|306967505|ref|ZP_07480166.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu009]
gi|306971697|ref|ZP_07484358.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu010]
gi|307079407|ref|ZP_07488577.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu011]
gi|307083975|ref|ZP_07493088.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu012]
gi|313658284|ref|ZP_07815164.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis KZN
V2475]
gi|54037115|sp|P64135|FMT_MYCBO RecName: Full=Methionyl-tRNA formyltransferase
gi|54040768|sp|P64134|FMT_MYCTU RecName: Full=Methionyl-tRNA formyltransferase
gi|166215482|sp|A1KIJ5|FMT_MYCBP RecName: Full=Methionyl-tRNA formyltransferase
gi|166215486|sp|A5U2A8|FMT_MYCTA RecName: Full=Methionyl-tRNA formyltransferase
gi|254789361|sp|C1AN51|FMT_MYCBT RecName: Full=Methionyl-tRNA formyltransferase
gi|1542914|emb|CAB02185.1| PROBABLE METHIONYL-TRNA FORMYLTRANSFERASE FMT [Mycobacterium
tuberculosis H37Rv]
gi|13881064|gb|AAK45715.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis
CDC1551]
gi|31618189|emb|CAD94302.1| PROBABLE METHIONYL-TRNA FORMYLTRANSFERASE FMT [Mycobacterium bovis
AF2122/97]
gi|121492983|emb|CAL71454.1| Probable methionyl-tRNA formyltransferase fmt [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|134149803|gb|EBA41848.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
str. Haarlem]
gi|148505349|gb|ABQ73158.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis H37Ra]
gi|148721153|gb|ABR05778.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
F11]
gi|224772924|dbj|BAH25730.1| methionyl-tRNA formyltransferase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253321047|gb|ACT25650.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
KZN 1435]
gi|289415770|gb|EFD13010.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis T46]
gi|289419960|gb|EFD17161.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
CPHL_A]
gi|289439435|gb|EFD21928.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
KZN 605]
gi|289538506|gb|EFD43084.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
K85]
gi|289543177|gb|EFD46825.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
T17]
gi|289690551|gb|EFD57980.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
T92]
gi|289694074|gb|EFD61503.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis
EAS054]
gi|289709071|gb|EFD73087.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis GM
1503]
gi|298494706|gb|EFI30000.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis
94_M4241A]
gi|308215900|gb|EFO75299.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu001]
gi|308326396|gb|EFP15247.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu002]
gi|308331082|gb|EFP19933.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu003]
gi|308334895|gb|EFP23746.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu004]
gi|308338704|gb|EFP27555.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu005]
gi|308342391|gb|EFP31242.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu006]
gi|308346229|gb|EFP35080.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu007]
gi|308350181|gb|EFP39032.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu008]
gi|308354823|gb|EFP43674.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu009]
gi|308358773|gb|EFP47624.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu010]
gi|308362710|gb|EFP51561.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu011]
gi|308366377|gb|EFP55228.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
SUMu012]
gi|323720070|gb|EGB29176.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
CDC1551A]
gi|326903027|gb|EGE49960.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
W-148]
gi|328459292|gb|AEB04715.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
KZN 4207]
Length = 312
Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats.
Identities = 96/306 (31%), Positives = 152/306 (49%), Gaps = 6/306 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+A+L+ L+ S H +++V T+P +GRRG K S V ++A E +P
Sbjct: 1 MRLVFAGTPEPALASLRRLIESPSHDVIAVLTRPDAASGRRG-KPQPSPVAREAAERGIP 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P++ E+ LS + VVAYG ++ +L G+ N H SLLP WRGAA
Sbjct: 60 VLRPSRPNSAEFVAELSDLAPECCAVVAYGALLGGPLLAVPPHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG +++ LD+GP+ + I L + L+V A +
Sbjct: 120 PVQAAIAAGDTITGATTFQIEPSLDSGPIYGVVTEVIQPTDTAGDLLKRLAVSGAALLST 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + L PQ +G++ A KI+ RV + A V IRA++P PGAW +
Sbjct: 180 TLDGIADQRLTPRPQPADGVSVAPKITVANARVRWDLPAAVVERRIRAVTPNPGAWTLIG 239
Query: 241 IGNKHERIKLLESQLVEGE-GKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
L++ + PG + + I VR+ ++Q G ++++ D+
Sbjct: 240 DLRVKLGPVHLDAAHRPSKPLPPGGIHVERTSVWIGTGSEPVRLGQIQPPGKKLMNAADW 299
Query: 298 LLGCPV 303
G +
Sbjct: 300 ARGARL 305
>gi|308184881|ref|YP_003929014.1| methionyl-tRNA formyltransferase [Helicobacter pylori SJM180]
gi|308060801|gb|ADO02697.1| methionyl-tRNA formyltransferase [Helicobacter pylori SJM180]
Length = 303
Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 88/310 (28%), Positives = 143/310 (46%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+R+VFMGT FA L+ALV +V ++TQ +P G R + E +
Sbjct: 1 MRIVFMGTPGFAEVILRALVGDKDIEVVGLFTQMDKPFG-RKKELKAPETKTYILENHLN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P L + E + D VVVAYG ++P+ +L N HASLLP++RGA
Sbjct: 60 IPIFQPQSLKEPEVQILKDLKPDFIVVVAYGKILPKEVLTIA--PCINVHASLLPKYRGA 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI I+ D GI+ M MD LD+G + ++ L +L+ + A ++
Sbjct: 118 SPIHEMILNDDRIYGISTMLMDLELDSGDILESASFLREDYLDLDALSLKLAHMGADLLL 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +++ PQ T+ +KI+K + V F + + S + +
Sbjct: 178 STLKN--FHSITRKPQDHAQATFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEIFL 232
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K + L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L
Sbjct: 233 ESNLKLLEVGLVENEKSHKEGEILEIDEKGVLVGCLKGSVRIERLQAVGKKPLKAKDYLN 292
Query: 300 GCPVIIGCIV 309
G + IG I+
Sbjct: 293 GKRLKIGGIL 302
>gi|256825114|ref|YP_003149074.1| methionyl-tRNA formyltransferase [Kytococcus sedentarius DSM 20547]
gi|256688507|gb|ACV06309.1| methionyl-tRNA formyltransferase [Kytococcus sedentarius DSM 20547]
Length = 336
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 98/340 (28%), Positives = 150/340 (44%), Gaps = 35/340 (10%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSS--------SHSIVSVYTQPPRPAGRRGLKSVLSAV 51
M L R+VF GT E A+ +L+ L+ S H +V V T+P G RG K S V
Sbjct: 1 MPLVRIVFAGTPEAALPSLEHLLDSARTADGRDRHEVVGVLTRPDARVG-RGRKLRPSPV 59
Query: 52 HKKAQEFSLPALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
+A E LP + + ++E DV +VAYG ++P +L G+ N H
Sbjct: 60 KARALEHGLPVIESDRPWEDEPLASLRELAPDVGAIVAYGALLPTSVLELPTHGWVNLHF 119
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL 170
SLLP WRGAAP QRA+MAGD+ TG + + +DTGPV I L + L
Sbjct: 120 SLLPAWRGAAPAQRALMAGDDLTGATTFVLTEGMDTGPVLGTLTEAIRPTDTAGDLLERL 179
Query: 171 SVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
S A + +++ L L PQ +G++ A K++ E R++F + A V + S
Sbjct: 180 SEAGAPLLTDSLHGLVSGALAPVPQPADGVSRAPKLTVDEVRLDFTQPAFAVVRRVAGAS 239
Query: 231 PFPGAWLEMMIGNKHERIKLLES------------------QLVEGEGKPGEVI--NPNF 270
P PGAW R+K+L++ PG ++ +
Sbjct: 240 PAPGAWTTFRGD----RLKVLQAAQVAGAPSSTGAGTAGPDDPSTPHLPPGRLLLHDGQV 295
Query: 271 TIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ + VR+ R+Q G + ++ + G +G
Sbjct: 296 LVGTATHPVRLQRVQPPGKQAMEAEAWARGARFDDQEALG 335
>gi|78355061|ref|YP_386510.1| methionyl-tRNA formyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78217466|gb|ABB36815.1| methionyl-tRNA formyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
Length = 329
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 111/309 (35%), Positives = 156/309 (50%), Gaps = 10/309 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
L++V+MGT +FA L L++ +++VYTQP RP G RGL+ SAV A E L
Sbjct: 7 KLKIVYMGTPDFAATVLSHLLAWEDAEVLAVYTQPDRPCG-RGLECRPSAVKSLALEHGL 65
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P EE + L+ DV VV AYGL++PQ +L+ G N HASLLPR+RGA
Sbjct: 66 PVFQPLNFKAEEDVRQLAALQPDVLVVAAYGLILPQCVLDIAPRGAVNVHASLLPRYRGA 125
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIM GD TG+ IM+M+ LD+GP+ R I A + EL+ L +V
Sbjct: 126 APIQRAIMNGDAVTGVTIMQMEAGLDSGPMLLQRATGIGITDTAATMHDELADLGGRLLV 185
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EA+ ++ + L Q T+A K++K + + + R A V HIR + P+PGA+ +
Sbjct: 186 EALGRMMKGELVPMEQNHEAATHAPKLTKADGEIVWNRPAREVDAHIRGVHPWPGAFFAL 245
Query: 240 MIGNKHERIKLLES----QLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVL 292
+E V KPG V IAC+ + L+ A + +
Sbjct: 246 RREGHKTLRVGIEPGCTGDAVPEGVKPGTVTGMAGDRLAIACADRLYLVSSLRPASRKPM 305
Query: 293 DIGDFLLGC 301
F G
Sbjct: 306 TASAFYCGY 314
>gi|149921737|ref|ZP_01910184.1| hypothetical protein PPSIR1_24584 [Plesiocystis pacifica SIR-1]
gi|149817388|gb|EDM76861.1| hypothetical protein PPSIR1_24584 [Plesiocystis pacifica SIR-1]
Length = 336
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 105/326 (32%), Positives = 152/326 (46%), Gaps = 22/326 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR VFMG+ +FAV +L A+ + V +QP RPAG RG K AV A+ +P
Sbjct: 12 KLRAVFMGSPDFAVPSLHAVHQHC-DLRLVVSQPDRPAG-RGRKLKPPAVKVAAEALGVP 69
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ PTK+ + + ++ VV AYG ++ + +L K G N HASLLPRWRGAA
Sbjct: 70 VVQPTKVRKGRLAALLQDADPEIIVVTAYGRILGRDVLELPKYGCVNVHASLLPRWRGAA 129
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+++GD ETG+AIMKMD DTGPV + PI + + L + L +
Sbjct: 130 PIQRAVLSGDAETGVAIMKMDIGCDTGPVYRLASTPIGAEETSGALFERL---ASFGGDV 186
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKI----SKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+ L PQ + + K E V++ S V +HIR + P+P AW
Sbjct: 187 LGEFLAAFPDVPPPQDQAELDGEPVHAAKLDKAEGEVDWSTSQRRVIDHIRGMDPWPCAW 246
Query: 237 LEMMIGNKHERIKLLESQLV---------EGEGKPGEVI---NPNFTIACSQGAVRIMRL 284
+ K + +L PG+V+ + + G VR+ +
Sbjct: 247 TKRSPDEGKAEGKAVILKLTGGGASDWSRPEGASPGQVLGVDDQGMHVCAGDGVVRVATV 306
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIVG 310
Q G R + D+ G P G +G
Sbjct: 307 QAPGKRRMAPRDYAAGQPFAEGERLG 332
>gi|116495107|ref|YP_806841.1| methionyl-tRNA formyltransferase [Lactobacillus casei ATCC 334]
gi|122263476|sp|Q038H3|FMT_LACC3 RecName: Full=Methionyl-tRNA formyltransferase
gi|116105257|gb|ABJ70399.1| methionyl-tRNA formyltransferase [Lactobacillus casei ATCC 334]
Length = 318
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 100/312 (32%), Positives = 160/312 (51%), Gaps = 16/312 (5%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT EFAV L+ L++ + I++V TQP R G R L+ S V + AQ+ +P L
Sbjct: 4 VIFLGTPEFAVPILEGLIAQHYDILAVMTQPDRKVG-RKLRLAASPVKQAAQKHDIPVLQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G E Q ++ D+ V AYG +P + L A K+ N H SLLP++RG APIQ
Sbjct: 63 PEKLSGSPELAQAIAMAPDLIVTAAYGQFLPTKFLEAAKIIAVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+IM GD+ETG+ I++M K +D G + K+P++ +T + +LS+L ++E +
Sbjct: 123 YSIMNGDSETGVTIIEMVKKMDAGDMFAQAKLPLTRADDTGTVFAKLSLLGRDLLLETLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ +PQ + +T++ I+K + +N A+ + IRAL P G ++ +
Sbjct: 183 KIIAGTATRTPQDPDKVTFSPTITKEQEHLNIHLPAKALDQWIRALRPDVGGYVYL---- 238
Query: 244 KHERIKLLESQLVE--GEGKPGEVINPN----FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+R KL + G ++ + +A Q ++ LQ AG I DF
Sbjct: 239 NGQRTKLWAITPLSAGSTLPAGSIVERDKHRLVMVAGQQTTFQVDELQPAGKAKQSIADF 298
Query: 298 LLGCPVIIGCIV 309
L G G +
Sbjct: 299 LNG----PGQQL 306
>gi|325478786|gb|EGC81897.1| methionyl-tRNA formyltransferase [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 310
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 80/310 (25%), Positives = 146/310 (47%), Gaps = 13/310 (4%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ + FMG +FAV TL L + V + + RG K + + K AQ+ +
Sbjct: 2 INICFMGNPKFAVRTLDILYKDKDIDVELVVSSEDKKR-SRG-KVSPTEIKKYAQDNDID 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P + EE+ L + D VVVA+G +I +L A N H S LP +RGA+
Sbjct: 60 VVTPKTVNTEEFVNKLKELDIDYIVVVAFGQMIGNVLLEAYPDRIINLHPSKLPEYRGAS 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q +I+ GD T M ++K +D+G + + V I + + ++++L + A A+ +
Sbjct: 120 PMQFSILNGDKITSATTMLIEKGMDSGDILMQKDVEIKDSDDYTSMEEKLGEIGALAIRD 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q + T+ KI+K ++N+ S+ ++ N IRA +P A
Sbjct: 180 TLLNFDSLYEKRIKQDDEKATFCTKITKDMGKINWSESSFDIINKIRAFVEYPVAHFSYE 239
Query: 241 IGNKHERIKLLESQLVEG-EGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
N +K+ ++++++ PG V I GA+R++++Q G + +D+
Sbjct: 240 GKN----VKVYKAEVLDSYNANPGFVYKANSKEGIVIGTGDGAIRLLKIQFPGKKAMDVK 295
Query: 296 DFLLGCPVII 305
FL+G
Sbjct: 296 SFLMGNDFKE 305
>gi|269977343|ref|ZP_06184316.1| methionyl-tRNA formyltransferase [Mobiluncus mulieris 28-1]
gi|269934646|gb|EEZ91207.1| methionyl-tRNA formyltransferase [Mobiluncus mulieris 28-1]
Length = 333
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 8/313 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F G+ A+ TL+ LV SSH +V V ++P P G RG K SAV + AQE L
Sbjct: 1 MRIIFAGSPAPALPTLEYLVDSSHEVVGVLSRPDAPRG-RGRKLQASAVAQYAQEHHLLL 59
Query: 63 LVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K + + D+ VVVAYG ++P IL + G+ N H SLLPRWRGAA
Sbjct: 60 YQPRSLKNDSTIATILRNLSPDLGVVVAYGAILPLEILKIPRYGWINLHFSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRA+ AGD ETG+ + ++ LDTG + + I N + + ++LS L +
Sbjct: 120 PVQRAVQAGDTETGVTVFNLEPTLDTGSIYAKLRYNIPPNASAGEVLEDLSELAISPLEI 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++DK+ P PQ + GI+YA ++S E ++++ +++E + HIR +P PGAW +
Sbjct: 180 SLDKIV-AGTPPDPQAQIGISYAPQLSVAEGQIDWTQNSEAISAHIRGFTPNPGAWTILS 238
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ++ E PG++ + V + + AG + + D
Sbjct: 239 GLRFKIGVLASGAEFPRQAMELAPGQIFPTRQGVWVGTGSTPVCLGTIAPAGKKHMPAVD 298
Query: 297 FLLGCPVIIGCIV 309
+ G + G
Sbjct: 299 WARGARLEFGMNF 311
>gi|218960358|ref|YP_001740133.1| methionyl-tRNA formyltransferase [Candidatus Cloacamonas
acidaminovorans]
gi|167729015|emb|CAO79926.1| methionyl-tRNA formyltransferase [Candidatus Cloacamonas
acidaminovorans]
Length = 314
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 90/316 (28%), Positives = 156/316 (49%), Gaps = 13/316 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R +F+G+S++ + L L + + + +QP +PAG R L + + + A E LP
Sbjct: 1 MRYLFIGSSDYGLPALNKLRQNGYEPSLIISQPAKPAG-RNLHLTPTPISQYAIEQKLPL 59
Query: 63 LVPTKLGQ-EEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + E + AD+ V A+G I ++I N G N H SLLP++RGA+P
Sbjct: 60 FTPMDINSAESITKMAEQKADIIVTAAFGEFINKKIRNLCPFGAVNLHPSLLPKYRGASP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ AI+ G+ ETG I + +D GP+ K+ I+ N + L++ L+ +++
Sbjct: 120 IQSAILNGETETGTTISLVSAKMDAGPILAQTKLSIAENETYSELKERLAEQAGDLLLQF 179
Query: 182 MDKLEQNNLPL-SPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
KL + Q E+ TY KI+ ++++ + E +HN IRA S PGAW
Sbjct: 180 WKKLITEKSLCGTKQDESKATYCYKITNKTCQIDWNKRTEEIHNQIRAFSLTPGAWTLF- 238
Query: 241 IGNKHERIKLLESQ--LVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDI 294
++ ++K+L S+ + G+PG + F + C + I ++Q AG +V++
Sbjct: 239 ---RYNKLKILCSEKTVEPANGEPGLICKIDKKRGFFVNCLDFKLLITKVQPAGKKVMEA 295
Query: 295 GDFLLGCPVIIGCIVG 310
F+ G + +G
Sbjct: 296 VAFINGARLREKEKLG 311
>gi|116747598|ref|YP_844285.1| methionyl-tRNA formyltransferase [Syntrophobacter fumaroxidans
MPOB]
gi|116696662|gb|ABK15850.1| methionyl-tRNA formyltransferase [Syntrophobacter fumaroxidans
MPOB]
Length = 305
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 105/320 (32%), Positives = 163/320 (50%), Gaps = 32/320 (10%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT EFAV +L+ L + I+ V TQP RP+G RG K L + AQE +P P +
Sbjct: 1 MGTPEFAVPSLRKLAEAGAPILLVVTQPDRPSG-RGKKVTLPPIKLLAQELGIPVFQPDR 59
Query: 68 LGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
+ + E ++ S A+ AVVVA+G ++PQ +L+ G N HASLLP++RGAAPI RAI
Sbjct: 60 VRKPEAIDRIRSAGAECAVVVAFGQILPQALLDVFPRGALNVHASLLPKYRGAAPIHRAI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ GD+ TGI++M +D +DTGPV R + I L L+ A ++E + +
Sbjct: 120 LEGDSGTGISVMLLDAGMDTGPVLTRRGLEIGDRETFGELHDRLAAAGAELLIETLKGWK 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
++ PQ + +YA + K E R+ + + A ++ + IRA P PGA+ +
Sbjct: 180 AGSVAAEPQDDAHASYAPPLRKEEFRLEWTQPAWHIVSRIRAFDPQPGAFF----MCGGK 235
Query: 247 RIKLLESQLVE--GEGKPGEVINPNFTIACSQG--------------AVRIMRLQRAGGR 290
R+K + L+ G+ GE++ G ++ I LQ G R
Sbjct: 236 RVKCFGASLLSLRTAGQGGEIV----------GLQAGGLVVLGGDGRSLLIGELQMEGQR 285
Query: 291 VLDIGDFLLGCPVIIGCIVG 310
+ +F+ G P+ G +G
Sbjct: 286 RVPAPEFVRGRPLPPGTRLG 305
>gi|296114108|ref|YP_003628046.1| methionyl-tRNA formyltransferase [Moraxella catarrhalis RH4]
gi|295921802|gb|ADG62153.1| methionyl-tRNA formyltransferase [Moraxella catarrhalis RH4]
Length = 341
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 106/330 (32%), Positives = 159/330 (48%), Gaps = 37/330 (11%)
Query: 2 TLRVVFMGTSEFAVATLQALVS----SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
+R++F GT EFA +L+ L+ + IV+VYTQP R +G RG K SA+ + AQ
Sbjct: 8 KMRIIFAGTPEFAAVSLKHLIDLQDVLNIQIVAVYTQPDRKSG-RGQKLTASAIKQVAQA 66
Query: 58 FSLPALVPTKLGQEEYEQF-----------LSFNADVAVVVAYGLVIPQRILNATKLGFY 106
+++P P + + ++ D+ +V AYGL++P +L K G
Sbjct: 67 YNIPVEQPISFSLKYQPEQGVSGAVSRETLANYQPDIMIVAAYGLILPLGVLKIPKFGCL 126
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N HASLLPRWRGAAPIQRAIMAGD ETGI IM+M LDTG + + PI T L
Sbjct: 127 NIHASLLPRWRGAAPIQRAIMAGDQETGITIMQMATGLDTGDMLYRVSCPILDTDTTQTL 186
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L+V+ A+A+ + L Q ++ YAEKI E +++ + A + I
Sbjct: 187 HDKLAVIGAYAITTVLQNLLHFQSLAKVQDDSLANYAEKIHTQEGLIDWNQDALTIQRQI 246
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVE----GEGKPGEVI---NPNFTIACS---- 275
RA L +K ERIK+L + ++ G+++ ++C
Sbjct: 247 RA--------LNAHTYHKSERIKVLSALPIKFDQTTSIPAGQIVSVGKNAILVSCGADTN 298
Query: 276 --QGAVRIMRLQRAGGRVLDIGDFLLGCPV 303
Q + I +Q GG+ L +
Sbjct: 299 GIQHLINITSIQWPGGKPLTAEQICQTNKL 328
>gi|313837735|gb|EFS75449.1| methionyl-tRNA formyltransferase [Propionibacterium acnes HL037PA2]
gi|314927383|gb|EFS91214.1| methionyl-tRNA formyltransferase [Propionibacterium acnes HL044PA1]
gi|314972673|gb|EFT16770.1| methionyl-tRNA formyltransferase [Propionibacterium acnes HL037PA3]
gi|328907467|gb|EGG27233.1| methionyl-tRNA formyltransferase [Propionibacterium sp. P08]
Length = 315
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 103/320 (32%), Positives = 163/320 (50%), Gaps = 19/320 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R++F GT + AV TL AL + H + +V T+P P G R V +KA+E +P
Sbjct: 1 MRLLFAGTPDVAVPTLAALAADPRHEVAAVLTRPDAPVG-RHRTPRPCPVAEKAEELGIP 59
Query: 62 A-LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
E ++ S N D AVVVAYG +IP +L + G+ N H SLLPRWRGAA
Sbjct: 60 VIRAINVKSGEGHDAIASLNVDAAVVVAYGGLIPADLLAVPRYGWINLHFSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRAIMAGD ETG + ++ + LD GPV +VPI + L EL+ ++
Sbjct: 120 PVQRAIMAGDEETGACVFRLVESLDAGPVYRTMRVPIGATTTAGELLDELACTATPLVIA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ +E P PQ G+T A +I G+ R+ AE + + +R SP PGAW ++
Sbjct: 180 TLEDIEAGVEPT-PQSAEGVTIAPQIHPGDVRIAVTADAEEIDHLVRGASPAPGAWAKLD 238
Query: 241 IGNKHERIKLLESQLVE---------GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGG 289
+R K+L+++ VE +PG+++ + + ++++Q G
Sbjct: 239 D----KRFKILQTRFVETGDDVPNSVATAQPGQLVATRKKLFLGTGSQPLELLQVQAFGK 294
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ ++ D+ G + G +
Sbjct: 295 KAINGTDWARGAHIDAGTRL 314
>gi|296110623|ref|YP_003621004.1| methionyl-tRNA formyltransferase [Leuconostoc kimchii IMSNU 11154]
gi|295832154|gb|ADG40035.1| methionyl-tRNA formyltransferase [Leuconostoc kimchii IMSNU 11154]
Length = 323
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 96/318 (30%), Positives = 161/318 (50%), Gaps = 16/318 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT VV MGT +FAV L+AL+ + + +V TQP RP G R S V A +
Sbjct: 1 MTYSVVLMGTPKFAVPILEALIDDERYDVKAVVTQPDRPQG-RKHTLTPSPVKVAALAHN 59
Query: 60 LPALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
L L P K+ +E +Q ++ N D V A+G +P ++L A K+ N HASLLP++RG
Sbjct: 60 LLVLQPEKISGSDEMQQVITMNPDFIVTAAFGQFLPTKLLAAAKIAAVNTHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP+ AIM GD ETG++IM M K +D G + + KVPI+ N + +LS+ +
Sbjct: 120 GAPVHYAIMNGDTETGVSIMYMVKKMDAGDIIDVVKVPITKQDNVGTMFDKLSLAGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRV-NFCRSAENVHNHIRALSPFPGAWL 237
+ + K+ Q E+ ++++ I + +A+ + H+R L P A++
Sbjct: 180 LATLPKIASGESHSVVQNEDEVSFSPNIPHELQNLDFMHETAQQIDWHVRGLYPTHPAYV 239
Query: 238 EMMIGNKHERIKLLESQLVE--GEGKPGEVINPNFTI----ACSQGAVRIMRLQRAGGRV 291
+++ +RIKL + ++ + G+++ + + A +Q + I +LQ AG
Sbjct: 240 QVLG----QRIKLTKVTPLDEKTDLSAGQIVEKSKKVLKVAAANQTVISIDKLQPAGKSE 295
Query: 292 LDIGDFLLGC--PVIIGC 307
+ + +L G + G
Sbjct: 296 MTVNAYLNGAGSQLQTGD 313
>gi|256851319|ref|ZP_05556708.1| methionyl-tRNA formyltransferase [Lactobacillus jensenii 27-2-CHN]
gi|260660743|ref|ZP_05861658.1| methionyl-tRNA formyltransferase [Lactobacillus jensenii 115-3-CHN]
gi|282933236|ref|ZP_06338623.1| methionyl-tRNA formyltransferase [Lactobacillus jensenii 208-1]
gi|256616381|gb|EEU21569.1| methionyl-tRNA formyltransferase [Lactobacillus jensenii 27-2-CHN]
gi|260548465|gb|EEX24440.1| methionyl-tRNA formyltransferase [Lactobacillus jensenii 115-3-CHN]
gi|281302740|gb|EFA94955.1| methionyl-tRNA formyltransferase [Lactobacillus jensenii 208-1]
Length = 314
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 86/313 (27%), Positives = 162/313 (51%), Gaps = 13/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT F L+ L+ ++ +++V TQP + G R K S V + AQ++ LP
Sbjct: 4 VIFLGTPNFGATVLEGLIKDNYQVLAVVTQPDKKVG-RKQKLTSSPVKEMAQKYDLPVYQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P + EE + ++ +AD+ + AYG +P + L + K+ N H SLLP++RG APIQ
Sbjct: 63 PARLPRSEELDTLINLHADLIITAAYGQFLPTKFLKSAKIAAVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD ETG+ IM+M K +D G + K+PI+ L +++++L +++ +
Sbjct: 123 YSLINGDKETGVTIMEMVKEMDAGDMYAQEKLPIAPEDTAGSLFEKMAILGRDLLLKTLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ + Q + ++ ISK + R+ +A VHN IR L+P PGA+L +
Sbjct: 183 SIIDGSCDKKAQDTTKVVFSPNISKDQERITKDMTASQVHNLIRGLNPDPGAYLMI---- 238
Query: 244 KHERIKLLESQLVEGEGK--PGEVINPNFTIA---CSQGAVRIMRLQRAGGRVLDIGDFL 298
+R+K+ S++ + G +++ + A + + + +Q G + + D++
Sbjct: 239 NGQRMKVWSSEVANETTQLPAGALVDNHKRFAVSFANHTVLNLTEIQPTGKKKMAGRDYM 298
Query: 299 L--GCPVIIGCIV 309
G + +G +
Sbjct: 299 NGKGASLKLGEVF 311
>gi|326571811|gb|EGE21817.1| methionyl-tRNA formyltransferase [Moraxella catarrhalis BC7]
Length = 341
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 106/330 (32%), Positives = 158/330 (47%), Gaps = 37/330 (11%)
Query: 2 TLRVVFMGTSEFAVATLQALVS----SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
+R++F GT EFA +L+ L+ + IV+VYTQP R +G RG K SA+ + AQ
Sbjct: 8 KMRIIFAGTPEFAAVSLKHLIDLQDVLNIQIVAVYTQPDRKSG-RGQKLTASAIKQVAQV 66
Query: 58 FSLPALVPTKLGQEEYEQF-----------LSFNADVAVVVAYGLVIPQRILNATKLGFY 106
+++P P + + ++ D+ +V AYGL++P +L K G
Sbjct: 67 YNIPVEQPISFSLKYQPEQGVSGAVSRETLANYQPDIMIVAAYGLILPLGVLKIPKFGCL 126
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N HASLLPRWRGAAPIQRAIMAGD ETGI IM+M LDTG + + PI T L
Sbjct: 127 NIHASLLPRWRGAAPIQRAIMAGDQETGITIMQMATGLDTGDMLYRVSCPILDTDTTQTL 186
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L+V+ AHA+ + L Q ++ YAEKI E +++ + A + I
Sbjct: 187 HDKLAVIGAHAITTVLQNLLHFQSLAKVQDDSLANYAEKIHTQEGLIDWNQDALTIQRQI 246
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVE----GEGKPGEVI---NPNFTIACS---- 275
RA +K ERIK+L + ++ G+++ ++C
Sbjct: 247 RA--------FNAHTYHKSERIKVLSALPIKFDQTTSIPAGQIVSVGKNAILVSCGADTN 298
Query: 276 --QGAVRIMRLQRAGGRVLDIGDFLLGCPV 303
Q + I +Q GG+ L +
Sbjct: 299 GIQHLINITSIQWPGGKPLTAEQICQTNKL 328
>gi|317182394|dbj|BAJ60178.1| methionyl-tRNA formyltransferase [Helicobacter pylori F57]
Length = 303
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 143/310 (46%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+R+VFMGT FA L+ALV +V ++TQ +P G R + E +
Sbjct: 1 MRIVFMGTPGFAEVILRALVKDEEIKVVGLFTQMDKPFG-RKKELKAPETKTYILENHLN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P L + E + + D VVVAYG ++P+ +L+ N HASLLP++RGA
Sbjct: 60 IPIFQPQSLKEPEVQILKALKPDFIVVVAYGKILPKEVLSIA--PCINAHASLLPKYRGA 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI I+ D GI+ M MD LD+G + ++ L+ +L+ + A ++
Sbjct: 118 SPIHEMILNDDKIYGISTMLMDTGLDSGDILESASFLREYYLDLETLRSKLAHMGATLLL 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ PQ ++ +KI+K + V F + + S + +
Sbjct: 178 STLKNFSSITRK--PQDHAQASFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEIFL 232
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K ++L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L
Sbjct: 233 ENSLKLLEVELVENEKSHKEGEILEIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKDYLN 292
Query: 300 GCPVIIGCIV 309
G + G I+
Sbjct: 293 GKRLKAGDIL 302
>gi|257784670|ref|YP_003179887.1| methionyl-tRNA formyltransferase [Atopobium parvulum DSM 20469]
gi|257473177|gb|ACV51296.1| methionyl-tRNA formyltransferase [Atopobium parvulum DSM 20469]
Length = 306
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 100/302 (33%), Positives = 150/302 (49%), Gaps = 7/302 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT +FAV +L+ L + H + V T+P G RG S V K AQE LP
Sbjct: 1 MRVVFMGTPDFAVPSLKKL-AHDHQVALVITRPDAVRG-RGKTLEPSPVKKCAQELDLPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L ++ E + VVA+G ++P +++ G N HASLLPRWRGAAPI
Sbjct: 59 LEANRMTSEVISAMREAQPEALCVVAFGCILPDEVISLAPYGALNVHASLLPRWRGAAPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI+AGD G++IMK+ LD G I + NT L L+ L A A+ EA+
Sbjct: 119 QRAILAGDVVAGVSIMKIAHELDAGDWCKQASCEI-GSKNTEQLTDTLAHLGADALSEAL 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+L+ L Q E +T+A K++K E ++ SA ++A S A + +G
Sbjct: 178 SELKDGFLEWQEQDEREVTFAPKVTKQEMKLTPEDSARVNVLRVQASS--DAAPARVSVG 235
Query: 243 NKHERIKLLESQLVEGEGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ RI + + G V + + C++G++ ++ ++ G R +D F G
Sbjct: 236 GRSLRILSAQLAPSDVSVAQGSVAVQDHRLFLGCAEGSIELLEVRPDGKRSMDAQSFAAG 295
Query: 301 CP 302
Sbjct: 296 LQ 297
>gi|311086219|gb|ADP66301.1| methionyl-tRNA formyltransferase [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
Length = 309
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 101/301 (33%), Positives = 164/301 (54%), Gaps = 12/301 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT F+ L AL++SSH ++SV TQP R +G RG K S V + +P
Sbjct: 3 KLKIVFAGTEYFSAEHLHALITSSHDVISVITQPDRYSG-RGQKITFSPVKILSLNNGIP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + L NAD+ VV+YG +IP++ILN G N HASLLPRWRGA
Sbjct: 62 IFQPENLNDTDFQNKLLKLNADIMTVVSYGKIIPKKILNMFSKGCINVHASLLPRWRGAT 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ +I+ GD +TGI+I++M+ +D+G + ISS T L +L + A++E
Sbjct: 122 PIQSSILHGDKKTGISIIQMNDEIDSGNIMHSITCSISSKDTTKTLSLKLIKIGIEALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++K+ N + Q E + ++KI K + +++ SAE + IRA +P+P +
Sbjct: 182 VLEKIILNTVIYKKQNEKNVILSKKIYKKDALLDWNLSAEKLERLIRAFNPWPICYF--- 238
Query: 241 IGNKHERIKLLESQLV---EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
++++ IK+ +S+++ + GE+I I S + I +LQ G +++D+
Sbjct: 239 -LSQNKNIKVWQSEVIPITQNNRSVGEIISYNKNGIQINTSHQILNIKKLQFPGKKIIDV 297
Query: 295 G 295
Sbjct: 298 K 298
>gi|315587029|gb|ADU41410.1| methionyl-tRNA formyltransferase [Helicobacter pylori 35A]
Length = 316
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 85/310 (27%), Positives = 143/310 (46%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+R+VFMGT FA L+ALV +V ++TQ +P G R + E +
Sbjct: 14 MRIVFMGTPGFAEVILRALVKDEEIKVVGLFTQMDKPFG-RKKELKAPETKTYILENHLN 72
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P L + E + + D VVVAYG ++P+ +L+ N HASLLP++RGA
Sbjct: 73 IPIFQPQSLKEPEVQILKALKPDFIVVVAYGKILPKEVLSIA--PCINAHASLLPKYRGA 130
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI I+ D GI+ M MD LD+G + ++ L+ +L+ + A ++
Sbjct: 131 SPIHEMILNDDKIYGISTMLMDTGLDSGDILESASFLREDYLDLETLRSKLAHMGATLLL 190
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ PQ ++ +KI+K + V F + + + + +
Sbjct: 191 STLKNFPFITRK--PQDHAQASFCKKITKADGLVGFKDAKSLFLKSLAFKN---WPEIFL 245
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K ++L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L
Sbjct: 246 ENSLKLLEVELVENEKSHKEGEILEINEKGVLVGCLKGSVRIARLQAVGKKPLKAKDYLN 305
Query: 300 GCPVIIGCIV 309
G + G I+
Sbjct: 306 GKRLKAGDIL 315
>gi|296134590|ref|YP_003641832.1| methionyl-tRNA formyltransferase [Thiomonas intermedia K12]
gi|295794712|gb|ADG29502.1| methionyl-tRNA formyltransferase [Thiomonas intermedia K12]
Length = 327
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 119/310 (38%), Positives = 167/310 (53%), Gaps = 14/310 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LRV F GT EFA L+A++S+ ++ V TQP RPAG RG+K S V + A +
Sbjct: 10 LRVAFAGTPEFAAVALRAILSAGYTAPLVLTQPDRPAG-RGMKLQSSPVKQVASAAQIEV 68
Query: 63 LV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ + + + + ADV VV AYGL++P +L +LG N H SLL
Sbjct: 69 IQPQGLRLDGRYAEQAAQAHAALRAAQADVLVVAAYGLILPTSVLTLPRLGCLNIHGSLL 128
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPIQRAI AGD +TGI +M+MD LDTG + + +PI S + L +L+VL
Sbjct: 129 PRWRGAAPIQRAIEAGDAQTGITLMQMDAGLDTGDMLLEQALPIESIDTASTLHDKLAVL 188
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A +V+ +D LE+ L PQ E G+TYA KISK E+ + + AE + +RA +P+P
Sbjct: 189 GAALVVQGLDALERGELRPRPQPEAGVTYAAKISKDESLLQWDLPAELLARRVRAFTPWP 248
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEV---INPNFTIACSQGAVRIMRLQRAGGR 290
G + G + E+ G PG V + C G +RI RLQ+ GG
Sbjct: 249 GTQFTLQDGGVVKVG-AAEALTAPHVGPPGLVRQMTAEGLDVVCGSGVLRITRLQKPGGT 307
Query: 291 VLDIGDFLLG 300
+ + +L G
Sbjct: 308 MQSVAQWLQG 317
>gi|154148666|ref|YP_001406259.1| methionyl-tRNA formyltransferase [Campylobacter hominis ATCC
BAA-381]
gi|259646025|sp|A7I168|FMT_CAMHC RecName: Full=Methionyl-tRNA formyltransferase
gi|153804675|gb|ABS51682.1| methionyl-tRNA formyltransferase [Campylobacter hominis ATCC
BAA-381]
Length = 302
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 82/309 (26%), Positives = 134/309 (43%), Gaps = 10/309 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE--FSL 60
+++VFMGT E+A A L+AL ++ I +V+TQP +P G R V K E
Sbjct: 1 MKIVFMGTPEYATAILRALFENNFKISAVFTQPDKPVG-RKQILTPPDVKKFLLESHADT 59
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P P+ + E + + + +VVA I + N HAS+LP++RGA+
Sbjct: 60 PIFQPSNIKTPEIAKKICEFSPDFIVVAAYGQILPLEI-LEICPCINLHASILPKFRGAS 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ AI+ G+ +G+ MKM LD G + I + + +V +
Sbjct: 119 PIQSAILEGEKISGVTAMKMGAGLDDGDILGFSFCGIQKLDESEVFHKFGNVAAKLCIKI 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +++ Q + +KI K + V F SA+ + A +PG +LE
Sbjct: 179 LQN---FDDIAPLKQKNVLSSKCKKIKKTDGLVKFSDSADEISAKFSAFKTWPGIFLENG 235
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
R S + GK + FT+A G + I++LQ + + DF+ G
Sbjct: 236 TKLLEIRKF---SDEKKEFGKISHITKDGFTLAVKDGEIEILKLQEPSKKAILARDFING 292
Query: 301 CPVIIGCIV 309
+ IG +
Sbjct: 293 KRLKIGDRI 301
>gi|126668177|ref|ZP_01739138.1| methionyl-tRNA formyltransferase [Marinobacter sp. ELB17]
gi|126627326|gb|EAZ97962.1| methionyl-tRNA formyltransferase [Marinobacter sp. ELB17]
Length = 343
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 114/315 (36%), Positives = 169/315 (53%), Gaps = 10/315 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R+VF GT +FA L+AL+++ +++V VY+QP RPAG RG K + V + A + +
Sbjct: 29 RIVFAGTPDFAATALKALLAAKYNVVGVYSQPDRPAG-RGRKLLQGPVKQAALDAGIAVF 87
Query: 64 VPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P E+ Q L+ DV +V AYGL++P +L+ G N HASLLPRWRGAAPI
Sbjct: 88 QPDNFKMEDARQQLAGLQPDVMIVAAYGLILPASVLSIPVHGCLNIHASLLPRWRGAAPI 147
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI AGD E+GI IM+MD+ LDTG + PI L L+ L A+V A+
Sbjct: 148 QRAIAAGDPESGITIMQMDEGLDTGAMLLKVSTPIHPEDTGGSLHDRLADLGGEAIVGAL 207
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
LEQN L Q YA K++K E ++++ A+++ IRA +P+PG + ++
Sbjct: 208 QLLEQNTLKPQAQQNEQACYAHKLAKQEGQIDWHGDAQSIERLIRAFNPWPGTFTDLGDQ 267
Query: 243 NKHERIKLLESQLVEGEGK---PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + E GK PG V+ IAC +G +R+ ++Q G R + D
Sbjct: 268 RIRLHLAQAQKHKQEQSGKKASPGTVLARQREGIDIACGEGVLRVSQVQLPGARAQSVND 327
Query: 297 FLLGCP--VIIGCIV 309
+ G ++ G +
Sbjct: 328 LINGGKQILLPGQEL 342
>gi|171464331|ref|YP_001798444.1| methionyl-tRNA formyltransferase [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|238692832|sp|B1XSN1|FMT_POLNS RecName: Full=Methionyl-tRNA formyltransferase
gi|171193869|gb|ACB44830.1| methionyl-tRNA formyltransferase [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 332
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 112/332 (33%), Positives = 172/332 (51%), Gaps = 32/332 (9%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VF GT EFA ++A+ ++ H IV +TQP R AG RG+ S V + A + ++P
Sbjct: 1 MKIVFAGTPEFAAQAVRAIHAAGHEIVLAFTQPDRRAG-RGMHLQASPVKEFALQKNIPI 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNAT----------------KLGFY 106
L P L + + A+ A + ++ A + G +
Sbjct: 60 LQPETLRRTSADPQKKAQAEEAYKSLSAIEFDAMVVVAYGLILPQEILDITEKPGRHGSF 119
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N HASLLPRWRGAAPIQRAI AGD +TG+ IM+MD LDTG + ++ I+ + +A L
Sbjct: 120 NIHASLLPRWRGAAPIQRAIEAGDAKTGVCIMQMDAGLDTGDTVLVVELDIARDETSASL 179
Query: 167 QQELSVLCAHAMVEAMDKLEQ-NNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNH 225
L+ L A +V A+D L+Q + SPQ GITYAEKI K E +++ SA+ +
Sbjct: 180 HDRLAGLGADLIVNALDVLQQGKTMIRSPQAIKGITYAEKILKSEAEIDWTLSAQEIDQR 239
Query: 226 IRALSPFPGAWLEMMIGNKHERIKLLESQLVEGE-----GKPGEVIN---PNFTIACSQG 277
IRA +PFPGA ++ IKL S+L + + G G+V+ I C +G
Sbjct: 240 IRAFNPFPGASSKLNGYA----IKLWNSRLADSQAFSMVGGAGDVLEFGRDGAYIQCGEG 295
Query: 278 AVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ ++ +Q+ GG+ + + P+ G +
Sbjct: 296 VLEVLEMQKPGGKKMAAKACIQ--PIGAGEKL 325
>gi|262038786|ref|ZP_06012140.1| methionyl-tRNA formyltransferase [Leptotrichia goodfellowii F0264]
gi|261747197|gb|EEY34682.1| methionyl-tRNA formyltransferase [Leptotrichia goodfellowii F0264]
Length = 310
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 89/314 (28%), Positives = 167/314 (53%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ +FMGT EFA+ +L+ + ++ + ++T+ + RG K + S V + + ++
Sbjct: 1 MKTIFMGTPEFAIPSLETVYKNT-DLKLIFTKEDKR-NARGNKIIFSPVKQFGLDNNIEI 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P + E E+ N D+ VVVAYG +IP+ I++ K G N H+SLLP++RGA+P
Sbjct: 59 IQPKRLKDAEITEKIREINPDLIVVVAYGKIIPKEIIDIPKYGIINVHSSLLPKYRGASP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD ETG++IM +++ LD G V I+ + L +L L A + +
Sbjct: 119 IHSAILNGDKETGVSIMYIEEELDAGDVILKEYCEINEDDTLGTLHDKLKELGATGLEKT 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E N+ Q + T+ + ISK + ++++ + ENV+N IR L+PFP A+
Sbjct: 179 LKLIEDGNVKTEKQDDTKATFVKPISKEQAKIDWTDTKENVYNKIRGLNPFPAAYTF--- 235
Query: 242 GNKHERIKLLESQLVEG--EGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
K+E IK+ + + ++ +G+ GE++ + G + + ++ G ++
Sbjct: 236 NEKNENIKVYKGEKIDKIYDGEFGEIVEIINKKGPVVKVQNGGIILTEVKFEGKKIQKGT 295
Query: 296 DFLLGCPVIIGCIV 309
D + G ++ G +
Sbjct: 296 DVINGRKLLQGEKL 309
>gi|326562325|gb|EGE12651.1| methionyl-tRNA formyltransferase [Moraxella catarrhalis 103P14B1]
gi|326563103|gb|EGE13376.1| methionyl-tRNA formyltransferase [Moraxella catarrhalis 12P80B1]
gi|326571734|gb|EGE21747.1| methionyl-tRNA formyltransferase [Moraxella catarrhalis BC8]
gi|326573498|gb|EGE23464.1| methionyl-tRNA formyltransferase [Moraxella catarrhalis O35E]
gi|326574351|gb|EGE24294.1| methionyl-tRNA formyltransferase [Moraxella catarrhalis CO72]
gi|326575529|gb|EGE25454.1| methionyl-tRNA formyltransferase [Moraxella catarrhalis 101P30B1]
Length = 341
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 107/330 (32%), Positives = 159/330 (48%), Gaps = 37/330 (11%)
Query: 2 TLRVVFMGTSEFAVATLQALVS----SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
+R++F GT EFA +L+ L+ + IV+VYTQP R +G RG K SA+ + AQ
Sbjct: 8 KMRIIFAGTPEFAAVSLKHLIDLQDVLNIQIVAVYTQPDRKSG-RGQKLTASAIKQVAQV 66
Query: 58 FSLPALVPTKLGQEEYEQF-----------LSFNADVAVVVAYGLVIPQRILNATKLGFY 106
+++P P + + ++ D+ +V AYGL++P +L K G
Sbjct: 67 YNIPVEQPISFSLKYQPEQGVSGAVSRETLANYQPDIMIVAAYGLILPLGVLKIPKFGCL 126
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N HASLLPRWRGAAPIQRAIMAGD ETGI IM+M LDTG + + PI T L
Sbjct: 127 NIHASLLPRWRGAAPIQRAIMAGDQETGITIMQMATGLDTGDMLYRVSCPILDTDTTQTL 186
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L+V+ AHA+ + L Q ++ YAEKI E +++ + A + I
Sbjct: 187 HDKLAVIGAHAITTVLQNLLHFQSLAKVQDDSLANYAEKIHTQEGLIDWNQDALTIQRQI 246
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVE----GEGKPGEVI---NPNFTIACS---- 275
RA L +K ERIK+L + ++ G+++ ++C
Sbjct: 247 RA--------LNAHTYHKSERIKVLSALPIKFDQTTSIPAGQIVSVGKNAILVSCGADTN 298
Query: 276 --QGAVRIMRLQRAGGRVLDIGDFLLGCPV 303
Q + I +Q GG+ L +
Sbjct: 299 GIQHLINITSIQWPGGKPLTAEQICQTNKL 328
>gi|260578785|ref|ZP_05846692.1| methionyl-tRNA formyltransferase [Corynebacterium jeikeium ATCC
43734]
gi|258603083|gb|EEW16353.1| methionyl-tRNA formyltransferase [Corynebacterium jeikeium ATCC
43734]
Length = 327
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E A L+ L+ +V+V TQP G RG S V + A+E ++P
Sbjct: 1 MKIVFAGTPEPAAVALEHLIADERLEVVAVITQPDAKRG-RGRNLHPSKVAEVAEEAAIP 59
Query: 62 ALVPT---------KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
+ + A VVAYG +IP IL+ + G+ N H SL
Sbjct: 60 TYKWPSLKAGSESGDEARGVLNDLAAEGVTAAAVVAYGNLIPVDILDVFEHGWVNLHYSL 119
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAP+Q A+ AGD TG +I ++++ LDTGPVA PI L L+
Sbjct: 120 LPRWRGAAPVQAALAAGDEATGASIFRIEQGLDTGPVAAQLSQPIGVEDTADDLLASLTY 179
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ + + +++ N LSPQ + T+A KI + ++++ + AE + +RA +P
Sbjct: 180 AGRELLADTLVDMDEGNAVLSPQDDTQATHAPKIHSADAQIDWSQPAEVIQRVVRAHTPA 239
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN--PNFTIACSQGAVRIMRLQRAGGR 290
PGAW + + L GE GEV+ + + I R+Q G +
Sbjct: 240 PGAWTLLDGQRYKIGMLLPSDSAEVGELGAGEVVASPKKVFVGTGTEPLEITRIQPPGKK 299
Query: 291 VLDIGDFLLGCP 302
+++ + G
Sbjct: 300 MMEAAAWARGQQ 311
>gi|313901452|ref|ZP_07834909.1| methionyl-tRNA formyltransferase [Thermaerobacter subterraneus DSM
13965]
gi|313468280|gb|EFR63737.1| methionyl-tRNA formyltransferase [Thermaerobacter subterraneus DSM
13965]
Length = 540
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 121/343 (35%), Positives = 164/343 (47%), Gaps = 40/343 (11%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LRVVFMGT FAV +L+ L+ +V V TQP RP G RGL V V AQE+ +P
Sbjct: 178 LRVVFMGTPAFAVPSLEELLQRQVRVVGVVTQPDRPQG-RGLAPVAPPVKALAQEYGIPV 236
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P +L ++ EQ ++ D+ VVVAYG ++P +L +LG N HASLLPR RGAAPI
Sbjct: 237 LQPERLDEQVVEQLQAWRPDLLVVVAYGKILPPAVLAVPRLGAINLHASLLPRHRGAAPI 296
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+AGD TG+ M MD+ LDTG + R+VP+ I L L+ L A + E +
Sbjct: 297 QHAILAGDTVTGVTTMWMDEGLDTGDIILQREVPLDDQITAGQLHDRLARLGAQLLGETL 356
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + P PQ T A K+ + VN+ A V IRAL P PGA
Sbjct: 357 RLVAEGKAPRQPQDGARATMAPKLRPEDEWVNWADDATRVARRIRALDPRPGARTT---- 412
Query: 243 NKHERIKLLESQLVEGEGK--------------------------------PGEVIN--- 267
+ + +KL + V + PG V+
Sbjct: 413 WRGQVLKLFGAGTVPPQAAGPDFPHQEERAPGGGGGEGSLPPGEEGGAPVPPGTVVAITP 472
Query: 268 PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ C G V I RLQ AG R + + + G + +G +G
Sbjct: 473 RAVAVRCGSGLVWIRRLQPAGRRPMTPLEMVNGYRLEVGERLG 515
>gi|195953876|ref|YP_002122166.1| methionyl-tRNA formyltransferase [Hydrogenobaculum sp. Y04AAS1]
gi|229487497|sp|B4U5Z8|FMT_HYDS0 RecName: Full=Methionyl-tRNA formyltransferase
gi|195933488|gb|ACG58188.1| methionyl-tRNA formyltransferase [Hydrogenobaculum sp. Y04AAS1]
Length = 302
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 98/303 (32%), Positives = 151/303 (49%), Gaps = 13/303 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GTS FAV +L+ L++S I V TQP +PAG RG K V +KA E +L
Sbjct: 1 MRIVFCGTSSFAVPSLE-LLASEFEIALVITQPDKPAG-RGQKLTPPPVKQKALELNLNI 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ E+ L+ D+ +VVAYG +IP+ +L N H S+LP++RGAAPI
Sbjct: 59 -SQPEKISFLKEELLNIKPDIMIVVAYGQIIPKSMLEIPTFKSLNLHGSVLPKYRGAAPI 117
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRA+M G+ ETG ++ M +D G + + +PI N L +LS+ A + + +
Sbjct: 118 QRALMQGEKETGNTVILMSSKMDEGDILSVESIPIEQEDNYEKLSNKLSIKGAKLLKDTI 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
++ PQ TYA I K E R+ F SA ++HN IR + P
Sbjct: 178 LSWVSGSIKPIPQNHQEATYAMPILKEELRICFKTSAFSIHNKIRGVYPNAYG------V 231
Query: 243 NKHERIKLLESQLVEG--EGKPGEVINPN--FTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ IK+L++ +VE KPGE+ + + I+ + G+ + +F
Sbjct: 232 SGDRNIKILKTNIVEKDLNLKPGELFYDGKSLFVGTGDLPLEILEIMSLKGKRVSGKEFA 291
Query: 299 LGC 301
+G
Sbjct: 292 MGY 294
>gi|159903465|ref|YP_001550809.1| putative methionyl-tRNA formyltransferase [Prochlorococcus marinus
str. MIT 9211]
gi|238687105|sp|A9BAJ3|FMT_PROM4 RecName: Full=Methionyl-tRNA formyltransferase
gi|159888641|gb|ABX08855.1| putative Methionyl-tRNA formyltransferase [Prochlorococcus marinus
str. MIT 9211]
Length = 339
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 91/339 (26%), Positives = 141/339 (41%), Gaps = 33/339 (9%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VF GT EF+V L+AL++S H +V V TQP R RG K + S V A E ++P
Sbjct: 1 MKIVFWGTPEFSVPILEALINSDHDVVGVVTQPDRRR-SRGNKLIHSPVKTVALENNIPV 59
Query: 63 LVPTKLGQE--EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + QE ++ ++ AD+ +VVA+G ++P IL++ LG +N HASLLPRWRGAA
Sbjct: 60 LTPQNIRQESLIQQKIINLKADLNLVVAFGQILPLLILDSPPLGSWNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAG----------LQQEL 170
PIQRAI+ GD TGI IM M++ LDTGP+ ++ PI N+
Sbjct: 120 PIQRAILEGDILTGICIMLMEEGLDTGPILLQKEFPIDVLRNSYQISSDLSSLSATTIIE 179
Query: 171 SVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
++ L + L Q + + H +
Sbjct: 180 ALELIRTSSHFTKNLVEIYPKLIKQDVVNCDPIYAKRLTKKEFQIDWKRLSEEIHRTIMG 239
Query: 231 PFPGAWLEMMIGNKHERIKL----------------LESQLVEGEGKPGEVI----NPNF 270
+P A+ + + + PGE++ F
Sbjct: 240 LYPAAYTSLNGKRIKLHNSIPLTPSFSTYISNNYDSYIIDYISTSSYPGEILAVIPKLGF 299
Query: 271 TIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ + + I+ Q G + + IG
Sbjct: 300 IVGTASYPILILNGQMEGRNSVSADILAKQIDLSIGIRF 338
>gi|187251155|ref|YP_001875637.1| methionyl-tRNA formyltransferase [Elusimicrobium minutum Pei191]
gi|229487493|sp|B2KCQ4|FMT_ELUMP RecName: Full=Methionyl-tRNA formyltransferase
gi|186971315|gb|ACC98300.1| Methionyl-tRNA formyltransferase [Elusimicrobium minutum Pei191]
Length = 333
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 82/334 (24%), Positives = 148/334 (44%), Gaps = 30/334 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ +F GT E AV L+ +++ +V V TQP RP G RG+ V + A + L
Sbjct: 1 MKTIFFGTPEVAVPYLE-ILNRYTEVVLVVTQPDRPRG-RGMVITPCPVKETALKMGLKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P K+ E + + D + VAYG ++ Q I++ KLG N H SLLP++RGAAP+
Sbjct: 59 LSPEKITDIEADLKAAGA-DYGIAVAYGQILKQHIIDIPKLGIVNIHFSLLPKFRGAAPV 117
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q + AG+ +TG+ +DK +DTGPV ++ I + + L +L L + + +
Sbjct: 118 QHTLFAGETKTGVTAFWIDKGMDTGPVFAYKETDILPSEDAKTLFTKLISLGGILLEDVI 177
Query: 183 DKLEQNNLPLSPQ---------IENGITYAEKISKGETRVNFCRSA--------ENVHNH 225
+ + + PQ + + + + E N
Sbjct: 178 EYIRLGQIVKIPQTKNIFTPQEDGSMFKEELPLPTYAPMIKKEDTILDFNNFGAETFFNR 237
Query: 226 IRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKP------GEVI----NPNFTIACS 275
+R L+ P A + I K + ++++++ L+E + G V+ + + C
Sbjct: 238 VRGLACGPHAKVITKINGKEDLLQIIKASLLEKNKQCPPNMPRGSVVSIENDGRILVKCY 297
Query: 276 QGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ I ++ AG + + F G + G ++
Sbjct: 298 DSCIYIDIVRPAGKKDMTAASFANGHKIKPGDVI 331
>gi|227363179|ref|ZP_03847313.1| methionyl-tRNA formyltransferase [Lactobacillus reuteri MM2-3]
gi|227071785|gb|EEI10074.1| methionyl-tRNA formyltransferase [Lactobacillus reuteri MM2-3]
Length = 310
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 92/308 (29%), Positives = 159/308 (51%), Gaps = 14/308 (4%)
Query: 8 MGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MGT EFAV LQ+L+ + + + +V TQP G R S V + A+++++ L P
Sbjct: 1 MGTPEFAVPILQSLIDNPEYDVQAVLTQPDHHIG-RKRTLHQSPVKELAEQYNIEVLQPA 59
Query: 67 K-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
K E E+ +S D+ + AYG +P ++L A K+ N H SLLP++RG APIQ +
Sbjct: 60 KLSKSPEMEKIISLQPDLMITAAYGQFLPTKLLAAAKIAAINVHGSLLPKYRGGAPIQYS 119
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
I+ GD ETG++IM M K +D G + R +PI ++ + ++LS+L ++E + KL
Sbjct: 120 IINGDKETGVSIMYMVKKMDAGDIISQRSIPIEDTDDSGTMFKKLSLLGRDLLLETLPKL 179
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKH 245
++ Q + + ++ I+ + +++F A + +R L P P + +
Sbjct: 180 ISGDVNPVAQDPDNVVFSPNITSEQEQIDFRLPAHLIDAKVRGLRPAPLGNMVI----DG 235
Query: 246 ERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFLL 299
R K+ + +E + +PG+V+ IA G +I +L+ AG + +DI +L
Sbjct: 236 LRTKIYDVTPLEEKTDLEPGKVVRVTKHQLVIAAGDGTTYQINKLKPAGKKAMDITSYLN 295
Query: 300 GCP-VIIG 306
G + G
Sbjct: 296 GHKDITEG 303
>gi|153003323|ref|YP_001377648.1| methionyl-tRNA formyltransferase [Anaeromyxobacter sp. Fw109-5]
gi|152026896|gb|ABS24664.1| methionyl-tRNA formyltransferase [Anaeromyxobacter sp. Fw109-5]
Length = 342
Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 103/310 (33%), Positives = 146/310 (47%), Gaps = 15/310 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT FAV L AL + H + +V QP RPAG RG A A+ +
Sbjct: 30 MRIVFMGTPAFAVPPLDALARAGHEVAAVVAQPDRPAG-RGQALREPATKVWARAHGVAV 88
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K+ + L D+ V AYG ++ +L G N H SLLP++RGAAP
Sbjct: 89 LQPEKVRDGRLARELEALRPDLLAVAAYGRILGSDLLQLAPHGALNVHGSLLPKYRGAAP 148
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ AI G+ ETG++IM+MD+ LDTG V R +PI + + L +L+ L A+VEA
Sbjct: 149 IQWAIAEGEAETGVSIMQMDEGLDTGDVLLQRVLPIGPDETSESLAPKLAALGGEALVEA 208
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L L Q + T A + K + RV++ RSA + + +RA +P+PGA +
Sbjct: 209 LALLPHGGLVPVKQDASRATLARILEKEDGRVDWTRSARRIRDRLRAFTPWPGATTTLDG 268
Query: 242 GNKHERIKLLESQLVEGEGK--------PGEVINPNFTIACSQG-AVRIMRLQRAGGRVL 292
+ E + PG + C G A+ + RLQ G
Sbjct: 269 RSVKLLEVREEPEAAGALAADPGAAALVPGR----GVAVRCGDGTALLVTRLQPEGRPPQ 324
Query: 293 DIGDFLLGCP 302
DF G
Sbjct: 325 AAVDFANGLR 334
>gi|326773323|ref|ZP_08232606.1| methionyl-tRNA formyltransferase [Actinomyces viscosus C505]
gi|326636553|gb|EGE37456.1| methionyl-tRNA formyltransferase [Actinomyces viscosus C505]
Length = 324
Score = 140 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 91/314 (28%), Positives = 153/314 (48%), Gaps = 9/314 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT E A+ TL+AL++S H +V V T+ G RG S V A++ L
Sbjct: 1 MRVLFAGTPEAALPTLEALIASEHDVVGVLTRADARKG-RGRTLHPSPVAAVARDAGLDV 59
Query: 63 LVPTKLGQEEYEQFLSFNA----DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
P L ++ ++ DVAVVVAYG ++P +L+ + G+ N H SLLP WRG
Sbjct: 60 HTPATLKGDQANDVHAWVNALKADVAVVVAYGRLVPADLLDVPEHGWLNLHFSLLPAWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+QRA++AG+ TG + ++++ LDTGPV IS + L + L+ A +
Sbjct: 120 AAPVQRAVIAGEEVTGACVFRLEEGLDTGPVYGRLTEAISGRDTSGDLLERLAQAGAPLV 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + ++E ++ PQ + T A +S + + + A + IR ++P PGA
Sbjct: 180 LDVLRRVEDGSVRPEPQDDALATLAPMLSSADGLIRWEDPALAIDRRIRGVTPAPGAHTT 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R+ + + PG++ + AVR+ ++ AG +
Sbjct: 240 Y--QGARFRLGPVTPVPEVTDLLPGQLRATKHEVLVGTGGCAVRLGQVAPAGRSWMPADA 297
Query: 297 FLLGCPVIIGCIVG 310
+ G +G ++G
Sbjct: 298 WARGARPEVGAVLG 311
>gi|296273880|ref|YP_003656511.1| methionyl-tRNA formyltransferase [Arcobacter nitrofigilis DSM 7299]
gi|296098054|gb|ADG94004.1| methionyl-tRNA formyltransferase [Arcobacter nitrofigilis DSM 7299]
Length = 306
Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 82/311 (26%), Positives = 156/311 (50%), Gaps = 8/311 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF-- 58
M R++FMGT ++A + +++SS+ IV ++TQP +P G R + + +
Sbjct: 1 MGKRILFMGTPDYATKIFEEILNSSYEIVGLFTQPDKPIG-RKQIITAPHIKQFCIDNDL 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P KL + + N + ++ N HASLLP++RG
Sbjct: 60 DIPIYQPQKLRNNQEAKQQIENLNPDFIIVAAYGQILPKEILDIAPCINLHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+PIQ +++ GDN TG+ M M++ LD+G + ++ I N+ L ELS + A
Sbjct: 120 ASPIQESLLNGDNYTGVTSMLMEEGLDSGDILGLKYFKIPQNMEVEELFSELSTVAAKLT 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+E ++ E + + Q E ++Y +KI K V+F +A+ ++ +A S +PG +L+
Sbjct: 180 IETLNNFENISPKV--QNETNVSYCKKIKKEYGEVSF-DNAQTLYKKYKAYSYWPGVYLK 236
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ ++I L+E + G+ + + IAC +G+++I LQ + ++ D++
Sbjct: 237 SGLKL--KKISLIEKNSLNNAGEILAIEDDGIIIACQKGSIKIATLQAPSKKEVNAIDYI 294
Query: 299 LGCPVIIGCIV 309
G + +G ++
Sbjct: 295 RGQRISLGSLL 305
>gi|110004542|emb|CAK98879.1| probable methionyl-trna formyltransferase protein [Spiroplasma
citri]
Length = 319
Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 95/318 (29%), Positives = 148/318 (46%), Gaps = 12/318 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS--HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
RV+FMGT FA A L+AL S I+ + TQP R G R S V + A
Sbjct: 3 KYRVIFMGTPIFATAVLKALQKLSPTIEIIGIVTQPDRKIG-RQQLVQFSPVKEFALTNQ 61
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P K+ E DV V AYG IP+RIL + N HASLLP+ RG
Sbjct: 62 IPVFQPEKINDLYAELVT-LQPDVIVTCAYGQFIPERILKLALINCINVHASLLPKLRGG 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API +AI+ G+ ETGI +M+M K +D G + +PIS + L L VL +
Sbjct: 121 APIHKAIIYGEQETGITLMQMIKKMDAGEMYVQTTIPISPTETASSLHDRLMVLAGTMIE 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + + +PQ ++ T+A I++ E +VN+ + + + IR L +P A+ +
Sbjct: 181 KHLLDIITGKIKGTPQDDSQATFAYNITRDEEKVNWFLPKQKIVDQIRGLYAWPIAYTTV 240
Query: 240 MIGNKHERIKLLESQLV---EGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGRVLD 293
+ + + + + + G +I+ + G + I RLQR G + D
Sbjct: 241 NNIHYKLHQAAITLEPLAEKDADFVNGTIIDISKLGIKVKVEDGYLLITRLQREGKKATD 300
Query: 294 IGDFL--LGCPVIIGCIV 309
++ +I+G I
Sbjct: 301 AKNYYHNASSEIIVGNIF 318
>gi|227500110|ref|ZP_03930181.1| possible methionyl-tRNA formyltransferase [Anaerococcus tetradius
ATCC 35098]
gi|227217825|gb|EEI83122.1| possible methionyl-tRNA formyltransferase [Anaerococcus tetradius
ATCC 35098]
Length = 312
Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 83/310 (26%), Positives = 153/310 (49%), Gaps = 13/310 (4%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ + FMG +FAV TL L + + V + P + RG K + + K AQE +
Sbjct: 2 INICFMGNPKFAVQTLDILYNDENIDVKLVVSSPDKKR-NRG-KVTPTEIKKYAQEKGIE 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P + +E+ + L + D VVVA+G +I + +L A + N H SLLP +RGA+
Sbjct: 60 VVCPKTVNTKEFVESLKDLDIDFIVVVAFGQLIGKDLLEAYEDRIINLHPSLLPLYRGAS 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q ++ GD T M ++K +D+G + +V I + N L+++LS + + A+ E
Sbjct: 120 PMQFTLLNGDKITAATTMLIEKGMDSGDILIQEEVEIKDDDNYTSLEEKLSEIGSKAVRE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ ++ Q + T+ KI+K ++++ +S+ + N IRA +P ++
Sbjct: 180 SILNYDRLYENRRKQDASKATFCTKITKEMGKIDWNKSSAEIINQIRAFVEYPNSYFSYE 239
Query: 241 IGNKHERIKLLESQLVEG-EGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
N K+ ++++ G E +P V I GA+R+ ++Q G + +D+
Sbjct: 240 DKNI----KVYDAEIATGFEQRPAYVYEANAKAGIVIGTKDGAIRLKKIQFPGKKAMDVK 295
Query: 296 DFLLGCPVII 305
FL+G
Sbjct: 296 AFLMGNSFKE 305
>gi|78187331|ref|YP_375374.1| methionyl-tRNA formyltransferase [Chlorobium luteolum DSM 273]
gi|123730027|sp|Q3B2V0|FMT_PELLD RecName: Full=Methionyl-tRNA formyltransferase
gi|78167233|gb|ABB24331.1| methionyl-tRNA formyltransferase [Chlorobium luteolum DSM 273]
Length = 314
Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 90/308 (29%), Positives = 150/308 (48%), Gaps = 5/308 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS--HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+R++FMGT EFAV +L+A+ + +V V T P RP R + V + A E L
Sbjct: 1 MRILFMGTPEFAVPSLRAVAGAGPGFEVVMVVTGPDRPRRSRNSAPEPTPVKQAALELGL 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L + + + +VVA ++P + A +LG +N HASLLP +RGAA
Sbjct: 61 RVLEVEDVKDPAFASTVQELRPDVIVVAAFRILPPAVYGAARLGSFNLHASLLPAYRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI A+M GD E+G+ + + +DTG + R P+ S+ N L LS + A A++
Sbjct: 121 PINHALMQGDRESGVTTFFLQQQVDTGNIILKRSTPVGSDENATELALRLSFIGAEAVLA 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + +S Q E+ + A K+++ TR+++ RSA ++HN IR LS P AW +
Sbjct: 181 TLRLIAEGRADVSLQDESMASKAPKLTRQNTRIDWNRSAADLHNFIRGLSMRPAAWTTLG 240
Query: 241 IGNKHERIKLLESQLVEGE-GKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ Q+ PG + + + G + ++ LQ G R ++ +F
Sbjct: 241 GKSVKIFRSAAAPQMSPSSPCAPGSLLIDDGRLYARGTDGWIELLLLQLEGKRPMEAPEF 300
Query: 298 LLGCPVII 305
+ G +
Sbjct: 301 VRGFRPEV 308
>gi|170782380|ref|YP_001710713.1| methionyl-tRNA formyltransferase [Clavibacter michiganensis subsp.
sepedonicus]
gi|189044504|sp|B0REV2|FMT_CLAMS RecName: Full=Methionyl-tRNA formyltransferase
gi|169156949|emb|CAQ02118.1| methionyl-tRNA formyltransferase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 305
Score = 140 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 88/302 (29%), Positives = 149/302 (49%), Gaps = 10/302 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT AV +LQ L +S H + V T+ P G R S V +A+ +P
Sbjct: 1 MRLVFAGTPLAAVPSLQRLAASGHEVALVVTRADAPLG-RKRVLTPSPVAAEAERLGIPT 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L +L + + + A++ V+VAYG ++ + +L+ G+ N H SLLPRWRGAAP+
Sbjct: 60 LRVNRLDDDATARIAAVGAELGVIVAYGGLVREPLLSTPARGWINLHFSLLPRWRGAAPV 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QR+IMAG+ TG ++ ++++ +DTGPV M + P + + L+V A + +
Sbjct: 120 QRSIMAGERVTGASVFQLERGMDTGPVFSMEERPTGDHETAGHVLDALAVQGADLLARTV 179
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D + PQ + RV++ RSA+ V IR ++P PGA +
Sbjct: 180 DAIGAGTAVARPQEGEPTLAPKTTIDDG-RVDWARSADEVLARIRGVTPEPGAHTSVDD- 237
Query: 243 NKHERIKLLESQLVEGEG--KPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
R+K+ + + +PG + ++ I + V ++++Q AG + D+
Sbjct: 238 ---VRLKIHRAAALRDAAPLEPGRIAALDGRVAIGTASHPVELIQVQPAGKSPMPAADWW 294
Query: 299 LG 300
G
Sbjct: 295 RG 296
>gi|326560690|gb|EGE11058.1| methionyl-tRNA formyltransferase [Moraxella catarrhalis 46P47B1]
Length = 341
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 107/330 (32%), Positives = 159/330 (48%), Gaps = 37/330 (11%)
Query: 2 TLRVVFMGTSEFAVATLQALVS----SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
+R++F GT EFA +L+ L+ + IV+VYTQP R +G RG K SA+ + AQ
Sbjct: 8 KMRIIFAGTPEFAAVSLKHLIDLQDVLNIQIVAVYTQPDRKSG-RGQKLTASAIKQVAQV 66
Query: 58 FSLPALVPTKLGQEEYEQF-----------LSFNADVAVVVAYGLVIPQRILNATKLGFY 106
+++P P + + ++ D+ +V AYGL++P +L K G
Sbjct: 67 YNIPVEQPISFSLKYQPEQGVSGAVSRETLANYQPDIMIVAAYGLILPLGVLKIPKFGCL 126
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N HASLLPRWRGAAPIQRAIMAGD ETGI IM+M LDTG + + PI T L
Sbjct: 127 NIHASLLPRWRGAAPIQRAIMAGDQETGITIMQMATGLDTGDMLYRVSCPILDTDTTQTL 186
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L+V+ AHA+ + L Q ++ YAEKI E +++ + A + I
Sbjct: 187 HDKLAVIGAHAITTVLQNLLYFQSLAKVQDDSLANYAEKIHTQEGLIDWNQDALTIQRQI 246
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVE----GEGKPGEVI---NPNFTIACS---- 275
RA L +K ERIK+L + ++ G+++ ++C
Sbjct: 247 RA--------LSAHTYHKSERIKVLSALPIKFDQTTSIPAGQIVSVGKNAILVSCGADTN 298
Query: 276 --QGAVRIMRLQRAGGRVLDIGDFLLGCPV 303
Q + I +Q GG+ L +
Sbjct: 299 GIQHLINITSIQWPGGKPLTAEQICQTNKL 328
>gi|237739500|ref|ZP_04569981.1| methionyl-tRNA formyltransferase [Fusobacterium sp. 2_1_31]
gi|229423108|gb|EEO38155.1| methionyl-tRNA formyltransferase [Fusobacterium sp. 2_1_31]
Length = 310
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 81/312 (25%), Positives = 160/312 (51%), Gaps = 8/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT FA+ +L+ L ++ + ++SV+T+ + RG K + S + A +L
Sbjct: 1 MKIIFMGTPTFALPSLEKL-NARYELLSVFTKIDK-VNARGNKIIYSPIKDFALANNLKI 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ + D+ VVVAYG ++P+ +L+ K G N H+SLLPR+RGAAP
Sbjct: 59 YQPENFKDNALIDEIRAMEPDLIVVVAYGKILPKEVLDIPKYGVINLHSSLLPRFRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD+++G++IM +++ LD GPV ++ IS L L + A +VEA
Sbjct: 119 INAAIIHGDSKSGVSIMYVEEELDAGPVILQKETEISDEDTFLTLHDRLKDMGADLLVEA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ ++ N + Q +N +T+ + K + ++++ +++ + N IR ++P P A+ +
Sbjct: 179 IELIKDNKVEPKVQDKNLVTFVKPFKKEDCKIDWTKTSREIFNFIRGMNPAPTAFSMLDK 238
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ + + GEV+ + + ++ I + + + D
Sbjct: 239 SIIKIYETIIYDKTYD-NASCGEVVEYIKGKGPVVKTADSSLIISSAKPENKKQISGVDL 297
Query: 298 LLGCPVIIGCIV 309
+ G + IG +
Sbjct: 298 INGKFLKIGEKL 309
>gi|116514364|ref|YP_813270.1| methionyl-tRNA formyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122274904|sp|Q049P0|FMT_LACDB RecName: Full=Methionyl-tRNA formyltransferase
gi|116093679|gb|ABJ58832.1| methionyl-tRNA formyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|325126063|gb|ADY85393.1| Methionyl-tRNA formyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 315
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 93/316 (29%), Positives = 163/316 (51%), Gaps = 14/316 (4%)
Query: 3 LR-VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ V+F+GT +F L+ L+ + + I++V TQP + G R K V S V + A LP
Sbjct: 1 MNSVIFLGTPQFGATVLEGLIKAGYHILAVVTQPDKKVG-RKQKVVYSPVKEVALANDLP 59
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + +E ++ L +AD + A+G +P + L + K+ N H SLLP++RG A
Sbjct: 60 LYQPVRLSKSDELDELLQLDADFIITAAFGQFLPTKFLKSAKIAAVNVHGSLLPKYRGGA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A+ GD ETG+ IM+M K +D G + +PI + + + +EL+ L ++E
Sbjct: 120 PIQYAVRNGDAETGVTIMEMVKEMDAGDMYAQASLPIRPDETSGEVFEELAPLGRDLLLE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ K+ + PQ + + ++ ISK E R++ +A+ N IRAL+P PGA+L +
Sbjct: 180 TLPKIASGEIVKKPQDPSQVVFSPTISKAEERISLKLTAKEAKNLIRALNPDPGAYLVIK 239
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVINP--NFTIA-CSQGAVRIMRLQRAGGRVLDIG 295
+R+K+ ++++ + G ++ F I+ + ++ +Q G + + I
Sbjct: 240 G----QRLKVWKAEVADDNTSLPAGHLLTNQGRFAISFAGNTVLNLLEVQPNGKKAMAIK 295
Query: 296 DFLL--GCPVIIGCIV 309
DFL G G +
Sbjct: 296 DFLNGQGKKFAAGEKI 311
>gi|317178557|dbj|BAJ56345.1| methionyl-tRNA formyltransferase [Helicobacter pylori F30]
Length = 303
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 140/310 (45%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+R+VFMGT FA L+ALV +V ++TQ +P G R + E +
Sbjct: 1 MRIVFMGTPGFAEVILRALVKDEEIEVVGLFTQMDKPFG-RKKELKAPETKTYILENHLN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P L + E + D VVVAYG ++P+ +L+ N HASLLP++RGA
Sbjct: 60 IPIFQPQSLKEPEVQILKDLKPDFIVVVAYGKILPKEVLSIA--PCINAHASLLPKYRGA 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI I+ D GI+ M MD LD+G + ++ L +L+ + A +
Sbjct: 118 SPIHEMILNDDKTYGISTMLMDVGLDSGDILESASFSREDYLDLETLSSKLAHMGATLLF 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ PQ ++ +KI+K + V F + + S + +
Sbjct: 178 STLKNFSSITRK--PQDHAQASFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEIFL 232
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K ++L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L
Sbjct: 233 ENSLKLLEVELVENEKSHKEGEILEIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKDYLN 292
Query: 300 GCPVIIGCIV 309
G + G I+
Sbjct: 293 GKRLKAGGIL 302
>gi|317486328|ref|ZP_07945158.1| methionyl-tRNA formyltransferase [Bilophila wadsworthia 3_1_6]
gi|316922398|gb|EFV43654.1| methionyl-tRNA formyltransferase [Bilophila wadsworthia 3_1_6]
Length = 334
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 110/312 (35%), Positives = 160/312 (51%), Gaps = 14/312 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS--SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
+RVVFMGT +FA L+ V++ +V+ Y QP RPAG RG K AV AQE
Sbjct: 7 KMRVVFMGTPDFAATVLRH-VAAWPGCEVVAAYCQPDRPAG-RGHKLQPPAVKVLAQELG 64
Query: 60 LPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P E L+ D VV AYGL++PQ +L+ +G +N H SLLP++RG
Sbjct: 65 IPVFQPLNFKDEADRAALAGLRPDALVVAAYGLILPQSVLDIPTIGPFNVHGSLLPQYRG 124
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQRAIM G++ TGI IM+M++ LDTGP+ R + I + A + EL+ L M
Sbjct: 125 AAPIQRAIMDGNHLTGITIMRMERGLDTGPMLLQRALGIGIDDTAATMHDELADLGGRLM 184
Query: 179 VEAM-DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
VE + + + PQ E TYA K++K + +++ A +H IR ++P+PGA
Sbjct: 185 VEVLRQYADGDPSTPIPQEEALATYAAKLTKADGHIDWDEDAAVIHARIRGVTPWPGAQT 244
Query: 238 EMMIGNKHERIKLLES-----QLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGG 289
++ + LL+ G PG ++ IAC + L+ AGG
Sbjct: 245 VFLLPGRDPLPALLQPGRVGETFTGGHPAPGTLVALRGGKLLIACRDALYEVSTLKPAGG 304
Query: 290 RVLDIGDFLLGC 301
+ + F G
Sbjct: 305 KPMSAEAFWNGY 316
>gi|300934518|ref|ZP_07149774.1| hypothetical protein CresD4_10641 [Corynebacterium resistens DSM
45100]
Length = 366
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 90/311 (28%), Positives = 152/311 (48%), Gaps = 15/311 (4%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++F GT E A ATL+ L+ +V+V TQP G RG SAV + A++ LP
Sbjct: 1 MKIIFAGTPEPAAATLEHLLADDRVEVVAVITQPDAKRG-RGRALRPSAVAEVAEQHGLP 59
Query: 62 ALVPTKLGQEEYEQFLSFNA---------DVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
L E + + VVAYG +IP +L+ + G+ N H SL
Sbjct: 60 VYKWATLKAETEDGRDARKRLATLSDEGAAAIAVVAYGNLIPADLLDVMEHGWINLHFSL 119
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAP+Q AI AGD +TG +I ++++ LDTGPV IS L L+
Sbjct: 120 LPRWRGAAPVQAAIAAGDGKTGASIFRIERGLDTGPVIATNSEQISLEDTADDLLTRLTY 179
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ +A+ L + + Q + T+A KI+ + ++++ ++ + RA +P
Sbjct: 180 SGRELLADALVALGEGTATTTIQDDATATHAAKITSADAQIDWRLPSQVIQRVARAHTPA 239
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEGEG-KPGEVI--NPNFTIACSQGAVRIMRLQRAGG 289
PGAW + +++ LL + + PG++ + + + ++I+R+Q G
Sbjct: 240 PGAWTVLEGQ-RYKIGLLLPATGGDAPALAPGQLHATKQHVWVGTATQTLQIIRIQPPGK 298
Query: 290 RVLDIGDFLLG 300
+++ D+ G
Sbjct: 299 KMMAAPDWARG 309
>gi|303233254|ref|ZP_07319926.1| methionyl-tRNA formyltransferase [Atopobium vaginae PB189-T1-4]
gi|302480644|gb|EFL43732.1| methionyl-tRNA formyltransferase [Atopobium vaginae PB189-T1-4]
Length = 310
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 94/309 (30%), Positives = 153/309 (49%), Gaps = 14/309 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+V+MGT EFAV L+ L++S H++ V T+P G RG S V A E +P
Sbjct: 1 MRIVYMGTPEFAVYPLEQLLTS-HTVTCVITRPDAVRG-RGRTLCPSPVKACALEHDIPC 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ ++ + F D VV AYG ++P +L G N HASLLPRWRGAAPI
Sbjct: 59 IETNRITDDVLNHIKDFAPDCIVVAAYGCILPDELLRCAPFGTLNIHASLLPRWRGAAPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI+AGD TG++IM++ LD+G V + L +ELS L A ++ A+
Sbjct: 119 QRAILAGDTHTGVSIMEVAHKLDSGRVCRQASC-AIGAQSLDELTRELSQLGARELLRAL 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+E N + Q E + YA K++K E ++ ++A S +E+
Sbjct: 178 TDIEHNTVVWHVQDEAQVCYAHKVTKPEMLLSPDDDCHTAARKVQASSNAEPCRVEIAG- 236
Query: 243 NKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQ-----GAVRIMRLQRAGGRVLDIG 295
+ +++ ++Q+ + GE+ N + C G++ ++R++ G + +D
Sbjct: 237 ---KAVRICKAQVADVVCDEGELRATKRNVYLGCKTLDGEMGSLELLRVKPTGKQEMDAS 293
Query: 296 DFLLGCPVI 304
+L G +
Sbjct: 294 AWLRGLQIT 302
>gi|109947160|ref|YP_664388.1| methionyl-tRNA formyltransferase [Helicobacter acinonychis str.
Sheeba]
gi|123362706|sp|Q17Y87|FMT_HELAH RecName: Full=Methionyl-tRNA formyltransferase
gi|109714381|emb|CAJ99389.1| fmt [Helicobacter acinonychis str. Sheeba]
Length = 305
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 83/312 (26%), Positives = 144/312 (46%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSS---SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
+R+VFMGT FA L+AL+ + + +V ++TQ +P G R + E
Sbjct: 1 MRIVFMGTPGFAEVILRALIENQNNNIEVVGLFTQMDKPFG-RKKELKAPETKTYILENH 59
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
++P P L + E + D VVVAYG ++P+ +L N HASLLP++R
Sbjct: 60 SNIPIFQPQSLKEPEVQILKGLKPDFIVVVAYGKILPKEVLKIA--PCINVHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+P+ I+ D G++ M MD LD+G + +N L +L+ + A
Sbjct: 118 GASPVHEMILNDDTIYGVSAMLMDLELDSGDILGSASFLREGYLNLETLSLKLAHMGATL 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
++ + +++ PQ T+ +KI+K + V F + + + +
Sbjct: 178 LLSTLKN--FHSITPKPQDHASATFCKKITKADGLVGFKDAKSLFLKSLAFKT---WPEI 232
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ K ++L+E++ EG+ + + C +G+VRI RLQ G + L D+
Sbjct: 233 FLENNLKLLGVELVENEKSHREGEILRIDERGVLVGCLKGSVRIARLQAVGKKPLKAKDY 292
Query: 298 LLGCPVIIGCIV 309
L G + G I+
Sbjct: 293 LNGRRLKAGDIL 304
>gi|313681878|ref|YP_004059616.1| methionyl-tRNA formyltransferase [Sulfuricurvum kujiense DSM 16994]
gi|313154738|gb|ADR33416.1| methionyl-tRNA formyltransferase [Sulfuricurvum kujiense DSM 16994]
Length = 303
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 86/311 (27%), Positives = 159/311 (51%), Gaps = 17/311 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT RV+FMGT ++A + L+AL+ + +V+VYTQP +P G R V A++ +
Sbjct: 1 MT-RVIFMGTPDYAESILEALITADDIEVVAVYTQPDKPVG-RKAVLTPPVVKVLAEKAN 58
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P PT+ +E S D+ +V AYG ++P+ +L N HAS+LP++RG
Sbjct: 59 IPVKQPTRLRDEEVVTDLRSIPCDLIIVAAYGQILPKAVLEHA--PCINLHASILPQYRG 116
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+PIQ++++ D+++G+ M MD+ LDTG + + + I ++ L + L+
Sbjct: 117 ASPIQQSLLNNDSQSGVTAMWMDEGLDTGAIIKIETLEIGADEMVESLYKRLTDSAVRLT 176
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + ++ Q + TY +KI K + ++F + ++N RA +P+PG + E
Sbjct: 177 LDVIRHWDRR--SAIKQNDAEATYCKKILKSDGLIDFSDAC-EIYNRYRAFTPWPGIFTE 233
Query: 239 MMIGNKHERIKLLESQLVEGEGKPG---EVINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+IK + + G+ G + + C +G+++I R+Q + +
Sbjct: 234 -----SGLKIKEMRLEDESSSGEAGVISRIDKEGVVVQCKKGSLKITRVQAPSKQETSVV 288
Query: 296 DFLLGCPVIIG 306
D+L G + G
Sbjct: 289 DYLNGKRIGCG 299
>gi|300811692|ref|ZP_07092167.1| methionyl-tRNA formyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|313124093|ref|YP_004034352.1| methionyl-tRNA formyltransferase fmt [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|300497319|gb|EFK32366.1| methionyl-tRNA formyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|312280656|gb|ADQ61375.1| Methionyl-tRNA formyltransferase FMT [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|325685887|gb|EGD27953.1| methionyl-tRNA formyltransferase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 315
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 92/316 (29%), Positives = 162/316 (51%), Gaps = 14/316 (4%)
Query: 3 LR-VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ V+F+GT +F L+ L+ + + I++V TQP + G R K V S V + A LP
Sbjct: 1 MNSVIFLGTPQFGATVLEGLIKAGYHILAVVTQPDKKVG-RKQKVVYSPVKEVALANDLP 59
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E ++ L +AD + A+G +P + L + K+ N H SLLP++RG A
Sbjct: 60 LYQPVRLSKSAELDELLQLDADFIITAAFGQFLPTKFLKSAKIAAVNVHGSLLPKYRGGA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A+ GD ETG+ IM+M K +D G + +PI + + + +EL+ L ++E
Sbjct: 120 PIQYAVRNGDAETGVTIMEMVKEMDAGDMYAQASLPIRPDETSGEVFEELAPLGRDLLLE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ K+ + PQ + + ++ ISK E R++ +A+ + IRAL+P PGA+L +
Sbjct: 180 TLPKIASGEIVKKPQDPSQVVFSPTISKAEERISLKLTAKEAKDLIRALNPDPGAYLVIK 239
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVINP--NFTIA-CSQGAVRIMRLQRAGGRVLDIG 295
+R+K+ ++++ + G ++ F I+ + ++ +Q G + + I
Sbjct: 240 G----QRLKVWKAEVADDNTSLPAGHLLTNQGRFAISFAGNTVLNLLEVQPNGKKAMAIK 295
Query: 296 DFLL--GCPVIIGCIV 309
DFL G G +
Sbjct: 296 DFLNGQGKKFAAGEKI 311
>gi|296140266|ref|YP_003647509.1| methionyl-tRNA formyltransferase [Tsukamurella paurometabola DSM
20162]
gi|296028400|gb|ADG79170.1| methionyl-tRNA formyltransferase [Tsukamurella paurometabola DSM
20162]
Length = 311
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 101/313 (32%), Positives = 153/313 (48%), Gaps = 10/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E AV L+AL++S H +V V T+P +GR G S V + A E +P
Sbjct: 1 MRLLFAGTPEPAVPALRALLASEHEVVGVLTRPDARSGR-GRGVRRSPVGQVADESGIPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P E + D VVAYG +IP +L+ + G+ N H SLLP WRGAAP
Sbjct: 60 LTPASLRDPEARSAIVDLAPDCCPVVAYGGMIPPDLLDVPRHGWINLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A+ AGD TG + +++ LDTGPV + I + L L+ A +
Sbjct: 120 VQAALEAGDEVTGASTFRIEAGLDTGPVFGVLTERIRPDDTATVLLGRLAEYGAELLTRT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + + PQ +G+++A K+S RV F A V HIRA++ PGAW +
Sbjct: 180 VDGVAAGAVSAVPQSTDGVSHAPKVSVDGARVRFDLPAGAVDRHIRAMTDAPGAWAQ--- 236
Query: 242 GNKHERIKLLESQLVEGEGK--PGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R+KL + PGE V + + + VR+ +Q G + + D+
Sbjct: 237 -HGDVRLKLGPVVVATDGAPLRPGELLVSKRDVLVGTATAPVRLGTVQPPGKKPMPAADW 295
Query: 298 LLGCPVIIGCIVG 310
G + G ++G
Sbjct: 296 ARGARIESGLVIG 308
>gi|217076586|ref|YP_002334302.1| fmt methionyl-tRNA formyltransferase [Thermosipho africanus TCF52B]
gi|226704305|sp|B7IFU7|FMT_THEAB RecName: Full=Methionyl-tRNA formyltransferase
gi|217036439|gb|ACJ74961.1| fmt methionyl-tRNA formyltransferase [Thermosipho africanus TCF52B]
Length = 304
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 85/308 (27%), Positives = 141/308 (45%), Gaps = 7/308 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F+GT FA L+ L+ ++ +V+V +QP +P G RG K + V + AQ++++P
Sbjct: 1 MRILFLGTPSFASEHLEFLIKNNFDVVAVISQPDKPKG-RGKKVQPTPVKEVAQKYNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
PTKL E + D+ +VVAYG ++ + FYN HASLLP++RGAAPI
Sbjct: 60 FQPTKLTSEGLSIIERYKPDLGIVVAYGKLLK--PPFLNAIPFYNIHASLLPKYRGAAPI 117
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRA+ G++ TGI I K+ + +D GP+A +++ + L ++L L A+ +
Sbjct: 118 QRALENGESVTGITIFKIGEGMDDGPIALKKEISVGEFETFGSLYEKLLSLGKEAL---L 174
Query: 183 DKLEQNNLPLSPQIENGIT-YAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L L PQ E + P + L+ I
Sbjct: 175 EFLNNYPPNLYPQEGVPTYAPKISKEDLELDFSADYVTVKNKIRAYDPIPGVRSVLKGKI 234
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+ + + ++ GK ++ N I+ G V I +Q G + + D G
Sbjct: 235 VKLFQVFYVEADENIKEYGKVLKINNEGGFISAKGGIVGIKYIQFPGKKPITFLDAKNGG 294
Query: 302 PVIIGCIV 309
V G
Sbjct: 295 LVKEGDKF 302
>gi|227542165|ref|ZP_03972214.1| methionyl-tRNA formyltransferase [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227181994|gb|EEI62966.1| methionyl-tRNA formyltransferase [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 320
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 101/320 (31%), Positives = 153/320 (47%), Gaps = 16/320 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E AVATL+ L++S H ++ V T+P G RG S V + A + LP
Sbjct: 1 MRILFAGTPEPAVATLERLIASDHEVIGVVTRPDARRG-RGRTLHPSPVAECADKHGLPV 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L + D V+AYG +IP+ +L+ + GF N H SLLPRWRGAA
Sbjct: 60 YKPETLRGNKSFVTLLKELAPDCVPVIAYGNLIPEELLDIPEHGFVNVHYSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A+ AGD++TG I ++D LDTGPV I+++ L L+ A +V+
Sbjct: 120 PVQAAVAAGDDQTGATIFRIDAGLDTGPVLSTVTTAITADDTADDLLTRLAYEGADLLVQ 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ LEQ + PQ TYA K+ K R+++ SA+ + IRA +P PGAW +
Sbjct: 180 TLTDLEQGAVVPVPQEGE-ATYAHKLDKDTARIDWEESADVIDRRIRAFTPAPGAWTQWD 238
Query: 241 IGNK------HERIKLLESQLVEGEGK----PGE--VINPNFTIACSQGAVRIMRLQRAG 288
+ + + PGE + N + AV + +Q G
Sbjct: 239 GAKVKLGPVSPLPCTQAPTSSLPPSSQVSLSPGEVRIEKNNVFVGTGSVAVALSTVQAPG 298
Query: 289 GRVLDIGDFLLGCPVIIGCI 308
+++D + G G +
Sbjct: 299 KKMMDAPSWGRGVQQQDGIV 318
>gi|227488839|ref|ZP_03919155.1| methionyl-tRNA formyltransferase [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227091261|gb|EEI26573.1| methionyl-tRNA formyltransferase [Corynebacterium glucuronolyticum
ATCC 51867]
Length = 320
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 101/320 (31%), Positives = 154/320 (48%), Gaps = 16/320 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E AVATL+ L++S H ++ V T+P G RG S V + A + LP
Sbjct: 1 MRILFAGTPEPAVATLERLIASDHEVIGVVTRPDARRG-RGRTLHPSPVAECADKHGLPV 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L + D V+AYG +IP+ +L+ + GF N H SLLPRWRGAA
Sbjct: 60 YKPETLRGNKSFVTLLKELAPDCVPVIAYGNLIPEELLDIPEHGFVNVHYSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A++AGD++TG I ++D LDTGPV I+++ L L+ A +V+
Sbjct: 120 PVQAAVVAGDDQTGATIFRIDAGLDTGPVLSTVTTAITADDTADDLLTRLAYEGADLLVQ 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ LEQ + PQ TYA K+ K R+++ SA+ + IRA +P PGAW +
Sbjct: 180 TLTDLEQGAVVPVPQEGE-ATYAHKLDKDTARIDWEESADVIDRRIRAFTPAPGAWTQWD 238
Query: 241 IGNK------HERIKLLESQLVEGEGK----PGE--VINPNFTIACSQGAVRIMRLQRAG 288
+ + + PGE + N + AV + +Q G
Sbjct: 239 GAKVKLGPVSPLPCTQAPTSSLPPSSQVSLSPGEVRIEKNNVFVGTGSVAVALSTVQAPG 298
Query: 289 GRVLDIGDFLLGCPVIIGCI 308
+++D + G G +
Sbjct: 299 KKMMDAPSWGRGVQQQDGIV 318
>gi|158313555|ref|YP_001506063.1| methionyl-tRNA formyltransferase [Frankia sp. EAN1pec]
gi|229487494|sp|A8LE22|FMT_FRASN RecName: Full=Methionyl-tRNA formyltransferase
gi|158108960|gb|ABW11157.1| methionyl-tRNA formyltransferase [Frankia sp. EAN1pec]
Length = 311
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 97/313 (30%), Positives = 155/313 (49%), Gaps = 15/313 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT A+ +L+AL+ S H +V+V T+P RPAG RG S V + A E L
Sbjct: 1 MRLVFAGTPAVALPSLRALLDSPRHQVVAVVTRPDRPAG-RGRHQRSSPVRELADERGLE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + ++ + D VVAYG ++P+ L+ K G+ N H SLLP +RGAA
Sbjct: 60 VLAPARASDPDFLARLGEIAPDCCPVVAYGALLPRPALDIPKHGWVNLHFSLLPAYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRA++AG++ TG ++ +++ LD+GPV + I + L L+V A +
Sbjct: 120 PVQRAVLAGEDMTGASVFEIEPALDSGPVYGVLTERIRPTDTSGDLLDRLAVAGARLLEA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD +E L PQ +G++ A K++ + RV++ A V +RA +P PGAW
Sbjct: 180 VMDGIEDGTLQARPQPSDGVSLAPKLTVEDVRVDWSAPAAAVDRLVRAATPAPGAWTTFR 239
Query: 241 IGNKHERIKLLESQLVEGEGKP---GEVINPN---FTIACSQGAVRIMRLQRAGGRVLDI 294
R+KL + P G + P + + V + ++ G +
Sbjct: 240 DR----RVKLGPVRPAPAGHPPLPSGRLAAPERGLVLVGTATTPVVLDEVRPEGKAPMPA 295
Query: 295 GDFLLGCPVIIGC 307
D++ G + G
Sbjct: 296 ADWIRG--LRPGT 306
>gi|189499855|ref|YP_001959325.1| methionyl-tRNA formyltransferase [Chlorobium phaeobacteroides BS1]
gi|229464466|sp|B3EPG6|FMT_CHLPB RecName: Full=Methionyl-tRNA formyltransferase
gi|189495296|gb|ACE03844.1| methionyl-tRNA formyltransferase [Chlorobium phaeobacteroides BS1]
Length = 317
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 82/312 (26%), Positives = 145/312 (46%), Gaps = 16/312 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH--SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+RV+FMGT FAV +L+A+ + + IV V T +P + + + V K A+E L
Sbjct: 1 MRVIFMGTPLFAVPSLRAVAEADNDVEIVLVVTGKDKPRRSQRAEPEPTPVKKAAKELGL 60
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L + + ++ +VVA ++P + +LG +N HASLLPR+RGAA
Sbjct: 61 AVLEIDDVKDARFADTIARYRPDVIVVAAFRILPPAVYELARLGSFNLHASLLPRYRGAA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ I+ GD ETG+ + + +DTG + ++ P++ L + L+ + A +++
Sbjct: 121 PVNWTIINGDRETGVTTFFLGRKVDTGNIILQQRTPVAPEETAGELTERLADIGAGVVLK 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ + Q + T A K++ TR+++ + + + +R LSP P AW
Sbjct: 181 TLKRIRDGEAEPTIQDDAMATRAPKLTSETTRIDWAEPVDAICDFVRGLSPKPSAWTVF- 239
Query: 241 IGNKHERIKLLESQL--------VEGEGKPGEVINPN--FTIACSQGAVRIMRLQRAGGR 290
H ++K+ E + PG ++ + G V I+ LQ G R
Sbjct: 240 ---NHRKVKIYRVAPGMFQLPEQDEQQKVPGALVVDGTRMFVMALDGWVEILSLQMEGKR 296
Query: 291 VLDIGDFLLGCP 302
+ DF G
Sbjct: 297 KMGAADFCCGFR 308
>gi|118464892|ref|YP_882554.1| methionyl-tRNA formyltransferase [Mycobacterium avium 104]
gi|259646042|sp|A0QI16|FMT_MYCA1 RecName: Full=Methionyl-tRNA formyltransferase
gi|118166179|gb|ABK67076.1| methionyl-tRNA formyltransferase [Mycobacterium avium 104]
Length = 317
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 98/318 (30%), Positives = 151/318 (47%), Gaps = 19/318 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M +R+VF GT E A+ L+ L+ S H +++V T+P +GRRG K S V ++A +
Sbjct: 1 MPVRLVFAGTPEPALPALRRLLDSPRHEVIAVLTRPDAASGRRG-KPEPSPVAREALDRG 59
Query: 60 LPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P + E+ L+ D VVAYG ++ +L G+ N H SLLP WRG
Sbjct: 60 IPVLRPARPNSPEFVAELAQLAPDCCAVVAYGALLRDELLAVPPHGWINLHFSLLPAWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+Q AI AGD TG +++ LD+GP+ + I L L+V A +
Sbjct: 120 AAPVQAAIAAGDTITGATTFRIEPALDSGPIYGVVTEAIRPTDTAGELLARLAVSGAELL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+D + + L PQ G++ A KI+ + RV + A V IRA++P PGAW
Sbjct: 180 SATLDGIADSTLTPRPQPAEGVSIAPKITVEQARVRWDLPAPVVERRIRAVTPNPGAWTV 239
Query: 239 MMIGNKHERIKLLESQLVEGE-----------GKPGEVINPNFTIACSQGAVRIMRLQRA 287
+ RIKL +L G V + + + VR+ ++Q
Sbjct: 240 IGD----LRIKLGPVRLGAASDLPAPPEPLPPGAI-HVDRKSVWVGTASDPVRLDQIQPP 294
Query: 288 GGRVLDIGDFLLGCPVII 305
G + ++ D+ G +
Sbjct: 295 GKKFMNAVDWARGARLDP 312
>gi|301168571|emb|CBW28161.1| methionyl-tRNA formyltransferase [Bacteriovorax marinus SJ]
Length = 313
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 94/307 (30%), Positives = 152/307 (49%), Gaps = 11/307 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
L ++F GT +F+V L+ L + H ++ V T P RPAG RG K V + A+ +
Sbjct: 3 KLNIIFCGTPDFSVPALEMLFNHPHVNLSHVITMPDRPAG-RGQKLQSPPVAEFAKASKI 61
Query: 61 PALVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ + +EE D VV+A+ + RILN KLG +N H SLLPR+RG
Sbjct: 62 SLIQTENINREEEILNKLEGEKVDAIVVLAFAQFLGSRILNLPKLGCFNIHTSLLPRYRG 121
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPIQ A++ GD E+G++I +M K +D G + + + N L L A ++
Sbjct: 122 AAPIQYALLNGDKESGVSIQRMVKQMDAGDLVHSYPMQLDDNETGGQLYTRLKFQAALSL 181
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNF-CRSAENVHNHIRALSPFPGAWL 237
+ KL N + +PQ + T+A + K + ++F ++ E +HN +RAL P+PG W
Sbjct: 182 NTVISKLLNNKITYTPQDHDAATFAPTLKKEDGFLDFSNKTIEEIHNQVRALIPWPGTWC 241
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++ +R+K+ + PG + + N I CS G +R+ +Q G +
Sbjct: 242 KL----NGKRLKVFSVEKSLKSISPGACDTKDGNILIGCSNGTLRLSDVQIEGKKRCSDT 297
Query: 296 DFLLGCP 302
+ G
Sbjct: 298 SLINGMK 304
>gi|207092378|ref|ZP_03240165.1| methionyl-tRNA formyltransferase [Helicobacter pylori
HPKX_438_AG0C1]
Length = 586
Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats.
Identities = 86/313 (27%), Positives = 141/313 (45%), Gaps = 13/313 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS---SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
+R+VFMGT FA L+ LV + +V ++TQ +P G R + E
Sbjct: 281 KMRIVFMGTPGFAEVILRVLVENEDKKIEVVGLFTQMDKPFG-RKKELKAPETKTYILEN 339
Query: 59 --SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
++P P L + E + D VVVAYG ++P+ +L N HASLLP++
Sbjct: 340 HLNIPIFQPQSLKEPEVQILKDLKPDFIVVVAYGKILPKEVLTIA--PCINLHASLLPKY 397
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGA+PI I+ D GI+ M MD LD+G + ++ L +L+ + A
Sbjct: 398 RGASPIHEMILNDDKIYGISTMLMDVGLDSGDILESASFLREDYLDLDALSLKLAHMGAA 457
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
++ + PQ ++ +KI+K + V F + + S
Sbjct: 458 LLLSTLKNFFSITRK--PQDHAQASFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPE 512
Query: 237 LEMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + K ++L+E++ EG+ E+ + C +G+VRI RLQ G + L D
Sbjct: 513 IFLENSLKLLEVELVENEKSHKEGEILEIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKD 572
Query: 297 FLLGCPVIIGCIV 309
+L G + IG I+
Sbjct: 573 YLNGKRLKIGGIL 585
>gi|50842675|ref|YP_055902.1| methionyl-tRNA formyltransferase [Propionibacterium acnes
KPA171202]
gi|289425561|ref|ZP_06427338.1| methionyl-tRNA formyltransferase [Propionibacterium acnes SK187]
gi|295130754|ref|YP_003581417.1| methionyl-tRNA formyltransferase [Propionibacterium acnes SK137]
gi|73919413|sp|Q6A8H1|FMT_PROAC RecName: Full=Methionyl-tRNA formyltransferase
gi|50840277|gb|AAT82944.1| methionyl-tRNA formyltransferase [Propionibacterium acnes
KPA171202]
gi|289154539|gb|EFD03227.1| methionyl-tRNA formyltransferase [Propionibacterium acnes SK187]
gi|291375150|gb|ADD99004.1| methionyl-tRNA formyltransferase [Propionibacterium acnes SK137]
Length = 315
Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats.
Identities = 108/320 (33%), Positives = 165/320 (51%), Gaps = 19/320 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R++F GT + AV TL ALV+ H + +V T+P G R V K A+E +P
Sbjct: 1 MRLLFAGTPDVAVPTLTALVADPRHEVAAVLTRPDAAVG-RHRTPRPCPVAKAAEELGIP 59
Query: 62 -ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ E ++ S +ADVAVVVAYG +IP +L + G+ N H SLLPRWRGAA
Sbjct: 60 AIKATSVKSGEGHDAITSLDADVAVVVAYGGLIPADLLAVPRHGWINLHFSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAIMAGD ETG + ++ + LD GPV VPI L EL+ ++E
Sbjct: 120 PIQRAIMAGDEETGACVFQLVESLDAGPVYRTMTVPIGPMTTAGELLDELAHTATPLVIE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ +E P +PQ G+T A +I + RV +A+ + N +R +SP PGAW E+
Sbjct: 180 ALEDIEAGVEP-TPQSVEGVTIAPQIHPDDVRVTVTAAAQEIDNLVRGVSPTPGAWAEL- 237
Query: 241 IGNKHERIKLLESQLVE---------GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGG 289
+R K+L ++ +E +PG+++ + + ++++Q G
Sbjct: 238 ---DGKRFKILRTRCLEAGDGVPSTVATAQPGQLVATRKQLFLGTGSQPLELLQVQAFGK 294
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
R + D+ G + G +
Sbjct: 295 RAMSGADWARGADIDAGTRL 314
>gi|317177891|dbj|BAJ55680.1| methionyl-tRNA formyltransferase [Helicobacter pylori F16]
Length = 303
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 85/310 (27%), Positives = 141/310 (45%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+R+VFMGT FA L+ALV +V + TQ +P G R + E +
Sbjct: 1 MRIVFMGTPGFAEVILRALVKDKEIEVVGLLTQMDKPFG-RKKELKAPETKAYILENHLN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P L + E + + D VVVAYG ++P+ +L+ N HASLLP++RGA
Sbjct: 60 IPIFQPQSLKEPEVQILKALKPDFIVVVAYGKILPKEVLSIA--PCINAHASLLPKYRGA 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI I+ D GI+ M MD LD+G + ++ L +L+ + A ++
Sbjct: 118 SPIHEMILNDDKIYGISTMFMDLGLDSGDILESASFLREDYLDLETLSLKLAHMGATLLL 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ PQ ++ +KI+K + V F + + + + +
Sbjct: 178 STLKNFSSITRK--PQDHAQASFCKKITKADGLVGFKDAKSLFLKSLAFKN---WPEIFL 232
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K ++L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L
Sbjct: 233 ENSLKLLEVELVENEKSHKEGEILEIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKDYLN 292
Query: 300 GCPVIIGCIV 309
G + G I+
Sbjct: 293 GKRLKAGGIL 302
>gi|313901119|ref|ZP_07834607.1| methionyl-tRNA formyltransferase [Clostridium sp. HGF2]
gi|312954077|gb|EFR35757.1| methionyl-tRNA formyltransferase [Clostridium sp. HGF2]
Length = 313
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 102/310 (32%), Positives = 155/310 (50%), Gaps = 8/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT E AV+ L+ L S + I+ V +QP + G R + V + A +
Sbjct: 6 IRILFMGTPEIAVSMLERLWSDGYRIIGVVSQPDKKVG-RKQVLQMPPVKQAALAHDIAV 64
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P ++ + E + D+ V AYG IP ++L G N HASLLP+ RG API
Sbjct: 65 YQPIRIRDDYEELM-QLDIDLIVTCAYGQFIPSKLLEHPTYGSVNVHASLLPKLRGGAPI 123
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
+AI+ G E+G++IM+M K +D G V V I L +L+V A + E++
Sbjct: 124 HKAIIEGHAESGVSIMRMVKKMDAGAVMAQSHVTIEDEDTMGSLYDKLAVSGAQLLSESI 183
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
K+ + Q E T+A I K E V+F R E+V+NHIR L P P A++ ++ G
Sbjct: 184 PKIIDGSAVFVEQNEAEATFAYTIQKEEEHVDFRRDVESVYNHIRGLIPAPCAYV-LVNG 242
Query: 243 NKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K + K+ +G GE+I + + IAC+ G + LQ G ++ F
Sbjct: 243 KKLKFHKVRRLSK-KGSAACGEIIGMVDGGYAIACADGLILADELQLEGKAKMEAKVFFN 301
Query: 300 GC-PVIIGCI 308
G +IGCI
Sbjct: 302 GSGKNLIGCI 311
>gi|261839872|gb|ACX99637.1| methionyl-tRNA formyltransferase [Helicobacter pylori 52]
Length = 303
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 141/310 (45%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+R+VFMGT FA L+ALV +V ++TQ +P G R + E +
Sbjct: 1 MRIVFMGTPGFAEVILRALVKDEEIEVVGLFTQMDKPFG-RKKELKAPETKTYILENHLN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P L + E + + D VVVAYG ++P+ +L N HASLLP++RGA
Sbjct: 60 IPIFQPQSLKEPEVQILKALKPDFIVVVAYGKILPKEVLTIA--PCINAHASLLPKYRGA 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI I+ D GI+ M MD LD+G V ++ L +L+ + A ++
Sbjct: 118 SPIHEMILNDDKIYGISTMLMDVGLDSGDVLESASFLREDYLDLETLSLKLAHMGAALLL 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ PQ ++ +KI+K + V F + + + + +
Sbjct: 178 STLKNFSSITRK--PQDHAQASFCKKITKADGLVGFKDAKSLFLKSLAFKN---WPEIFL 232
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K ++L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L
Sbjct: 233 ENSLKLLEVELVENEKSHKEGEILEIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKDYLN 292
Query: 300 GCPVIIGCIV 309
G + G I+
Sbjct: 293 GKRLKAGGIL 302
>gi|329946676|ref|ZP_08294088.1| methionyl-tRNA formyltransferase [Actinomyces sp. oral taxon 170
str. F0386]
gi|328526487|gb|EGF53500.1| methionyl-tRNA formyltransferase [Actinomyces sp. oral taxon 170
str. F0386]
Length = 322
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 154/314 (49%), Gaps = 9/314 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT E A+ TL+AL++S H +V V T+ G RG S V A+E L
Sbjct: 1 MRVLFAGTPEAALPTLEALIASEHDVVGVLTRADARKG-RGRSLHPSPVAATAREAGLDV 59
Query: 63 LVPTKLG----QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
PT L E + NADVAVVVAYG +IP +L+ + G+ N H SLLP WRG
Sbjct: 60 RTPTTLKGEAADEVPDWVRGLNADVAVVVAYGRLIPADLLDVPEHGWLNLHFSLLPAWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+QRA++AG+ TG + ++++ LDTGPV I + + L + L+ + +
Sbjct: 120 AAPVQRAVIAGEEITGACVFRLEEGLDTGPVYGRITEAIGATDTSGDLLERLARAGSSLV 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + +E ++ PQ + T A +S + V + A + IR +SP PGA
Sbjct: 180 LDVLGSVEDGSVRPEPQDDELATLAPMLSTADGEVRWDDPALTIDRRIRGVSPAPGAHTT 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ R+ + + PG++ + AVR+ ++ AG +
Sbjct: 240 YL--GARFRLGPVTPVPEVTDLLPGQIRATKREVLVGTGGCAVRLGQVAPAGRSWMAADA 297
Query: 297 FLLGCPVIIGCIVG 310
+ G +G ++G
Sbjct: 298 WARGARPGVGTVLG 311
>gi|254779692|ref|YP_003057798.1| methionyl-tRNA formyltransferase [Helicobacter pylori B38]
gi|254001604|emb|CAX29686.1| Methionyl-tRNA formyltransferase [Helicobacter pylori B38]
Length = 303
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 88/310 (28%), Positives = 139/310 (44%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+R+VFMGT FA L+ALV +V ++TQ +P G R + E +
Sbjct: 1 MRIVFMGTPGFAEVILRALVGDRDIEVVGLFTQMDKPFG-RKKELKAPETKTYILENHLN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P L + E + D VVVAYG ++P+ +L N HASLLP++RGA
Sbjct: 60 IPIFQPQSLKEPEVQILKDLKPDFIVVVAYGKILPKEVLTIA--PCINLHASLLPKYRGA 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI I+ D GI+ M MD LD+G + +N L +L + A ++
Sbjct: 118 SPIHEMILNDDKIYGISTMLMDMELDSGDILESASFLREDYLNLDALSLKLVHMGATLLL 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ Q T+ +KI+K + V F + + S + +
Sbjct: 178 STLKNFSSITRKS--QDHTQATFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEIFL 232
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K ++L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L
Sbjct: 233 ENSLKLLEVELVENEKSHKEGEILEIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKDYLN 292
Query: 300 GCPVIIGCIV 309
G + IG I+
Sbjct: 293 GKRLKIGGIL 302
>gi|297171901|gb|ADI22888.1| methionyl-tRNA formyltransferase [uncultured Rhizobium sp.
HF0500_35F13]
Length = 319
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 87/319 (27%), Positives = 163/319 (51%), Gaps = 12/319 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++V MGT FAV ++L++S H ++++ T+P RP+ +RG + + L
Sbjct: 1 MKLVVMGTGPFAVPMFESLLASKHQLLALVTRPVRPSRQRGRSLAE-PMRQAGLAAGLEI 59
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + +Q L+ AD+ VV +G ++ L+ T LG N H SLLPR+RGAAP
Sbjct: 60 LDPEDVNTPASQQQLAELAADLLVVCDFGQILSADSLSVTPLGGINLHGSLLPRYRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A++ G++ TG++++ M LD GP+ R+ I + N L+Q LS+L +++A
Sbjct: 120 VQWALIQGESSTGVSVIHMTPRLDAGPILSSRETTIGPSENAGELEQRLSILGVEPVLDA 179
Query: 182 MDKLEQNNLPL---SPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+D L + Q E+ A +++K + ++++ A + +R L P+PG +
Sbjct: 180 IDLLTDWDQQSSLGMQQQEDQACPARRLTKQDGQLDWSLPAVELCRRLRGLQPWPGCFTN 239
Query: 239 MM-IGNKHERIKLLESQLVEGEG----KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRV 291
+G R+ + +++ + G + + +A G + ++++Q AG R
Sbjct: 240 WQRVGKPPLRLIIEQAEPLPAAAGDLPAAGTLTECDGTLMVATGDGLLSLLQVQPAGKRS 299
Query: 292 LDIGDFLLGCPVIIGCIVG 310
+ I +F G + G +G
Sbjct: 300 MSIEEFSRGYQIAAGDQLG 318
>gi|217032672|ref|ZP_03438158.1| hypothetical protein HPB128_202g6 [Helicobacter pylori B128]
gi|216945602|gb|EEC24253.1| hypothetical protein HPB128_202g6 [Helicobacter pylori B128]
Length = 303
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 87/310 (28%), Positives = 141/310 (45%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+R+VFMGT FA L+ALV + +V ++TQ +P G R + E +
Sbjct: 1 MRIVFMGTPGFAEVILRALVENKDIEVVGLFTQMDKPFG-RKKELKAPETKTYILENHLN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P L + E + D VVVAYG ++P+ +L N HASLLP++RGA
Sbjct: 60 IPIFQPQSLKEPEVQILKDLKPDFIVVVAYGKILPKEVLAIA--PCINLHASLLPKYRGA 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI I+ D GI+ M MD LD+G + +N L +L+ + A ++
Sbjct: 118 SPIHEMILNDDRIYGISTMLMDLELDSGDILESASFLREDYLNLDALSLKLAHMGADLLL 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ PQ ++ +KI+K + V F + + S + +
Sbjct: 178 STLKNFSSITRK--PQDHMQASFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEIFL 232
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K ++L+E++ EG+ + + C +G+VRI RLQ G + L D+L
Sbjct: 233 ENSLKLLEVELVENEKSHKEGEILAIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKDYLN 292
Query: 300 GCPVIIGCIV 309
G + IG I+
Sbjct: 293 GKRLKIGGIL 302
>gi|308062417|gb|ADO04305.1| methionyl-tRNA formyltransferase [Helicobacter pylori Cuz20]
Length = 303
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 142/310 (45%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+R+VFMGT FA L+ALV +V ++TQ +P G R + + E +
Sbjct: 1 MRIVFMGTPGFAEVILRALVKDKEIEVVGLFTQMDKPFG-RQKELKAPEIKTYILENHLN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P L + E + D VVVAYG ++P+ +L+ N HASLLP++RGA
Sbjct: 60 IPIFQPQSLKEPEVQILKDLKPDFIVVVAYGKILPKEVLSIA--PCINAHASLLPKYRGA 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI I+ D GI+ M MD LD+G + ++ L +L+ + A ++
Sbjct: 118 SPIHEMILNDDKIYGISTMLMDVGLDSGDILESASFLREEYLDLDALSLKLAHMGAALLL 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ PQ ++ +KI+K + V F + + S + +
Sbjct: 178 STLKNFSSITRK--PQDHAQASFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEIFL 232
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K ++L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L
Sbjct: 233 ENSLKLLGVELVENEKSHKEGEILEIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKDYLN 292
Query: 300 GCPVIIGCIV 309
G + G I+
Sbjct: 293 GKRLKAGGIL 302
>gi|254775819|ref|ZP_05217335.1| methionyl-tRNA formyltransferase [Mycobacterium avium subsp. avium
ATCC 25291]
Length = 315
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 151/316 (47%), Gaps = 19/316 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+ L+ L+ S H +++V T+P +GRRG K S V ++A + +P
Sbjct: 1 MRLVFAGTPEPALPALRRLLDSPRHEVIAVLTRPDAASGRRG-KPEPSPVAREALDRGIP 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + E+ L+ D VVAYG ++ +L G+ N H SLLP WRGAA
Sbjct: 60 VLRPARPNSPEFVAELAQLAPDCCAVVAYGALLRDELLAVPPHGWINLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG + +++ LD+GP+ + I L L+V A +
Sbjct: 120 PVQAAIAAGDTITGASTFRIEPALDSGPIYGVVTEAIRPTDTAGELLARLAVSGAELLSA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + + L PQ G++ A KI+ + RV + A V IRA++P PGAW +
Sbjct: 180 TLDGIADSTLTPRPQPAEGVSIAPKITVEQARVRWDLPAPVVERRIRAVTPNPGAWTVIG 239
Query: 241 IGNKHERIKLLESQLVEGE-----------GKPGEVINPNFTIACSQGAVRIMRLQRAGG 289
RIKL +L G V + + + VR+ ++Q G
Sbjct: 240 D----LRIKLGPVRLGAASDLPAPPEPLPPGAI-HVDRKSVWVGTASDPVRLGQIQPPGK 294
Query: 290 RVLDIGDFLLGCPVII 305
+ ++ D+ G +
Sbjct: 295 KFMNAVDWARGARLDP 310
>gi|312870002|ref|ZP_07730141.1| methionyl-tRNA formyltransferase [Lactobacillus oris PB013-T2-3]
gi|311094587|gb|EFQ52892.1| methionyl-tRNA formyltransferase [Lactobacillus oris PB013-T2-3]
Length = 317
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 98/315 (31%), Positives = 161/315 (51%), Gaps = 14/315 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +VFMGT +FAV LQ L+ + + +V TQP G R S V + A + +
Sbjct: 1 MTTSIVFMGTPQFAVPVLQGLLDQPEYDVQAVLTQPDHRVG-RKHVLTPSPVKQLAVDNN 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ L P K E ++ ++ D+ + AYG +P ++L A K+ N H SLLP++RG
Sbjct: 60 IKVLQPAKLNKSPEMDEIIALQPDLLITAAYGQFLPSKLLAAAKIAAVNVHGSLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP+Q +I+ GD ETGI+IM M K +D G V R VPI + + + +LS+L +
Sbjct: 120 GAPVQYSIINGDAETGISIMYMVKQMDAGDVLAQRAVPIEKDDDNGTMFDKLSILGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+E + KL +PQ E+ + ++ IS + R+++ A+ + N +R L P P +
Sbjct: 180 LETLPKLVDGTATATPQDESQVVFSPNISTAQERIDYRLPADQIDNKVRGLRPAPLGNMV 239
Query: 239 MMIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVL 292
+ R K+ + ++ +PG+V+ +A G +I RL+ AG + +
Sbjct: 240 I----DGLRTKIYDVTPLDEKTNLQPGQVVRATKHQLVLAAGNGTTYQINRLKPAGKQAM 295
Query: 293 DIGDFLLGCP-VIIG 306
DI +L G + G
Sbjct: 296 DITAYLNGHQDLTEG 310
>gi|187917943|ref|YP_001883506.1| methionyl-tRNA formyltransferase [Borrelia hermsii DAH]
gi|229487441|sp|B2S1P9|FMT_BORHD RecName: Full=Methionyl-tRNA formyltransferase
gi|119860791|gb|AAX16586.1| methionyl-tRNA formyltransferase [Borrelia hermsii DAH]
Length = 309
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 82/311 (26%), Positives = 136/311 (43%), Gaps = 7/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ F + A+ L+ V+ H++V V T P +P+G RGL + + +A ++
Sbjct: 1 MRIFFASSESIALEVLKK-VADQHNVVGVLTAPDKPSG-RGLFLRANDIKVEATNRNITV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P L + E N D+ +V +YG + Q L+ +G N H SLLP++RG +PI
Sbjct: 59 LDPVVLNSDVVEIVKRLNPDLMLVFSYGKIFRQEFLDIFPMGCINVHPSLLPKYRGPSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD GI + KM +D+G + + I S +A + L + +V
Sbjct: 119 QTAILNGDTVGGITVQKMALEMDSGNILSQSQFEIKSFNTSADIF-RYVSLNSFNLVLEA 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
Q TY +K ++F SA + N I A +P+P A ++
Sbjct: 178 LSKLDKGNIGIEQDSRQATYCSFFNKQHRILDFNLSAFEIKNKINACNPWPLARAKLDDD 237
Query: 243 NKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ G++I + + G + ++ LQRAG +V+D F
Sbjct: 238 EIIFHRADFIRTNDYSDQAIGKIILFDPSRGILVKTGDGILLLLELQRAGRKVMDYKSFY 297
Query: 299 LGCPVIIGCIV 309
G +IG I
Sbjct: 298 NGNRDLIGKIF 308
>gi|325000007|ref|ZP_08121119.1| methionyl-tRNA formyltransferase [Pseudonocardia sp. P1]
Length = 310
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 94/311 (30%), Positives = 149/311 (47%), Gaps = 6/311 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R++F GT E AV L+AL+ S H +V+V T+P P+G RG + S V A E +P
Sbjct: 1 MRLLFAGTPEPAVPALRALLDSPRHDVVAVLTRPDAPSG-RGRRLTRSPVGALADEAGIP 59
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K E+ + D A VVAYG ++P+ +L+ G+ N H SLLP WRGAA
Sbjct: 60 VLTPAKPAGPEFVEVLRELAPDCAPVVAYGALLPRAVLDVPAHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A+ GD+ TG ++++ +DTGP + + L L+ A +
Sbjct: 120 PVQAALRQGDDVTGATTFRLEEGMDTGPTFGVVTETVGGGDTAGALLGRLAESGAKLLTA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D +E + PQ G++ A K++ + RV+ A + +R+++P PGAW E
Sbjct: 180 TLDGIEDGTVEAVPQPAEGVSLAPKVTPADARVDLASPAAAIDRLVRSVTPEPGAWCEFR 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ + E E PGE V S V + ++ G R++ D+
Sbjct: 240 DDRLGL-GPVRPLRTGEVELAPGELRVERRRVLAGTSTVPVELGEVKPKGKRLMPAPDWA 298
Query: 299 LGCPVIIGCIV 309
G + G +
Sbjct: 299 RGARIEPGEYL 309
>gi|212703763|ref|ZP_03311891.1| hypothetical protein DESPIG_01811 [Desulfovibrio piger ATCC 29098]
gi|212672731|gb|EEB33214.1| hypothetical protein DESPIG_01811 [Desulfovibrio piger ATCC 29098]
Length = 329
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 90/308 (29%), Positives = 143/308 (46%), Gaps = 11/308 (3%)
Query: 4 RVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
R+VFMGT + A A L+ LV ++V+VYTQP RPAG RG K S V K A E LP
Sbjct: 6 RIVFMGTPDLAAAVLRRLVRWPGGNVVAVYTQPDRPAG-RGHKLTPSPVKKLALELGLPV 64
Query: 63 LVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + ++ + D+ VV AYGL++PQ +L+ + N H SLLPR+RGAAP
Sbjct: 65 HQPLNFRQEGAVDELAALEPDLLVVAAYGLILPQAVLDIPTVDTLNVHTSLLPRYRGAAP 124
Query: 122 IQR--AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
IQR + + + + L L+ ++
Sbjct: 125 IQRAVMENWQPGDVTGVSIMRIVPALDAGPVYAQCEVPIGEHTAGSLHDALAEAGGELLL 184
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+D+L + Q E+ +TYA K++K + +++ R A VH IR ++P+PGA L+
Sbjct: 185 TVLDQLRDGSAQAREQDESRVTYAAKLAKEDGYIDWDRPAAEVHARIRGVTPWPGARLQA 244
Query: 240 MIGNKHERIKLL----ESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ E + LL +PG + +AC+ R++ ++ G + ++
Sbjct: 245 RFDGQDELLPLLLQPGRVDEPCDGVRPGSLRTDKKGLCVACADRWYRLLVVRPQGRKDME 304
Query: 294 IGDFLLGC 301
F+ G
Sbjct: 305 AAAFVNGH 312
>gi|309804759|ref|ZP_07698823.1| methionyl-tRNA formyltransferase [Lactobacillus iners LactinV
09V1-c]
gi|309806283|ref|ZP_07700296.1| methionyl-tRNA formyltransferase [Lactobacillus iners LactinV
03V1-b]
gi|312871596|ref|ZP_07731688.1| methionyl-tRNA formyltransferase [Lactobacillus iners LEAF 3008A-a]
gi|312873251|ref|ZP_07733307.1| methionyl-tRNA formyltransferase [Lactobacillus iners LEAF 2052A-d]
gi|308165869|gb|EFO68088.1| methionyl-tRNA formyltransferase [Lactobacillus iners LactinV
09V1-c]
gi|308167267|gb|EFO69433.1| methionyl-tRNA formyltransferase [Lactobacillus iners LactinV
03V1-b]
gi|311091262|gb|EFQ49650.1| methionyl-tRNA formyltransferase [Lactobacillus iners LEAF 2052A-d]
gi|311092821|gb|EFQ51173.1| methionyl-tRNA formyltransferase [Lactobacillus iners LEAF 3008A-a]
Length = 314
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 96/313 (30%), Positives = 165/313 (52%), Gaps = 13/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT +F LQ L+ + I +V TQP + G R + S V K A +L
Sbjct: 4 VIFLGTPKFGAVVLQGLIDQGYKIEAVVTQPDKKFG-RKQELHQSEVKKVALANNLKIYQ 62
Query: 65 P-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P EE + LS D V AYG +P + L K+ N H SLLP++RG APIQ
Sbjct: 63 PLHLSKSEEMNELLSIRPDFIVTAAYGQFLPTKFLQTAKIKAINVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD +TG+ I++M K +D G + R + IS + + L ++LS++ ++E +
Sbjct: 123 YSLINGDKQTGVTIIEMVKKMDAGEMYGSRVIDISDDDTSGSLFEKLSIIGRDLLLEVIP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ N + + Q E+ + ++ ISK + ++ +A HN +RAL+P PGA+ I
Sbjct: 183 KIIANQIVPTCQDEDKVVFSPNISKDQEQIKTSMTATQAHNLVRALNPQPGAY----ILM 238
Query: 244 KHERIKLLESQLV--EGEGKPGEVINPN--FTIACSQGAV-RIMRLQRAGGRVLDIGDFL 298
++R K+ +S++ + + G +++ N F I+ S G + +I+ +Q G + + I DF+
Sbjct: 239 HNKRYKIWQSEVSAEKCSLESGYLVSKNKEFAISFSNGTILKILNIQPTGKKPIAIKDFI 298
Query: 299 L--GCPVIIGCIV 309
G +G +
Sbjct: 299 NGQGNQFKVGEKI 311
>gi|190571066|ref|YP_001975424.1| methionyl-tRNA formyltransferase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|229487574|sp|B3CLK1|FMT_WOLPP RecName: Full=Methionyl-tRNA formyltransferase
gi|190357338|emb|CAQ54769.1| methionyl-tRNA formyltransferase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 299
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 97/301 (32%), Positives = 151/301 (50%), Gaps = 12/301 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMG+ FAV L L+ +V+VYT+ P+P+GRR + S VH A++ +
Sbjct: 1 MRIIFMGSPGFAVGALNLLLKLQSEVVAVYTKAPKPSGRR-QRLTKSPVHIVAEKSDIEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E E+F +F DVAVV AYGL++P+ ILN K G N H SLLPRWRGAAP
Sbjct: 60 CTPASLKSSIEQEKFGNFKPDVAVVAAYGLILPKEILNIPKYGCINIHPSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ I+AGD ETG++IM++D+ LD+GP+ I + + L + +
Sbjct: 120 IQHTILAGDQETGVSIMQLDEGLDSGPILKQ----KKFLIEKSDNYKTLYDKLSELGSDL 175
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ K+ P ++ + ++ + E + ++A P +E
Sbjct: 176 LLKVLNEIEKQVPLKQSDNDACYADKVKDYKIYASDACEIAYRKVKAFYPKAFIKVE--- 232
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
++RIK+L+++ GE+IN N I+ G + +Q G DI DF+ G
Sbjct: 233 ---NKRIKILDAEFEAFTSGQGEIINDNMHISLKGGTLIPKVVQMEGRNPCDIKDFVRGL 289
Query: 302 P 302
Sbjct: 290 K 290
>gi|148272957|ref|YP_001222518.1| hypothetical protein CMM_1775 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|166214888|sp|A5CRW8|FMT_CLAM3 RecName: Full=Methionyl-tRNA formyltransferase
gi|147830887|emb|CAN01831.1| fmtA [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 305
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 88/302 (29%), Positives = 156/302 (51%), Gaps = 10/302 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT AV +L L +S H + V T+ P G R + S V ++A+ +P
Sbjct: 1 MRLVFAGTPRAAVPSLVRLHASGHEVALVVTRADAPTG-RKRQLTPSPVAREAEGLGIPT 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L +L +E + + A + V+VAYG ++ + +L+ G+ N H SLLPRWRGAAP+
Sbjct: 60 LRTNRLDEEATARIAAVGAGLGVIVAYGGLVREPLLSTPARGWINLHFSLLPRWRGAAPV 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QR+IMAG+ TG ++ ++++ +DTGPV + + P ++ + L++ A +V +
Sbjct: 120 QRSIMAGETVTGASVFRLERGMDTGPVFAVEERPTGAHETAGDVLHALAMQGADLLVRTV 179
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D + + PQ T A K S + R+++ R A+ V IR ++P PGA+ +
Sbjct: 180 DGIAAGSAVARPQEGE-PTLAPKTSIADGRIDWARPADAVLAQIRGVTPEPGAFTSVDD- 237
Query: 243 NKHERIKLLESQLVEGEGK--PGEVINPN--FTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
R+K+ + + PG + + + + V ++++Q AG + + D+
Sbjct: 238 ---VRVKVHRAAELRDAAPLDPGRIESVGGAVMVGTTSHPVELIQVQPAGKKPMPAADWW 294
Query: 299 LG 300
G
Sbjct: 295 RG 296
>gi|259501639|ref|ZP_05744541.1| methionyl-tRNA formyltransferase [Lactobacillus iners DSM 13335]
gi|302191154|ref|ZP_07267408.1| methionyl-tRNA formyltransferase [Lactobacillus iners AB-1]
gi|259166924|gb|EEW51419.1| methionyl-tRNA formyltransferase [Lactobacillus iners DSM 13335]
Length = 314
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 96/313 (30%), Positives = 165/313 (52%), Gaps = 13/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT +F LQ L+ + I +V TQP + G R + S V K A +L
Sbjct: 4 VIFLGTPKFGAVVLQGLIDQGYKIEAVVTQPDKKFG-RKQELHQSEVKKVALANNLKIYQ 62
Query: 65 P-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P EE + LS D V AYG +P + L K+ N H SLLP++RG APIQ
Sbjct: 63 PLHLSKSEEMNELLSIRPDFIVTAAYGQFLPTKFLQTAKIKAINVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD +TG+ I++M K +D G + R + IS + + L ++LS++ ++E +
Sbjct: 123 YSLINGDKQTGVTIIEMVKKMDAGEMYGSRAIDISDDDTSGSLFEKLSIIGRDLLLEVIP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ N + + Q E+ + ++ ISK + ++ +A HN +RAL+P PGA+ I
Sbjct: 183 KIIANQIVPTCQDEDKVVFSPNISKDQEQIKTSMTATQAHNLVRALNPQPGAY----ILM 238
Query: 244 KHERIKLLESQLV--EGEGKPGEVINPN--FTIACSQGAV-RIMRLQRAGGRVLDIGDFL 298
++R K+ +S++ + + G +++ N F I+ S G + +I+ +Q G + + I DF+
Sbjct: 239 HNKRYKIWQSEVSAEKCSLESGYLVSKNKEFAISFSNGTILKILNIQPTGKKPIAIKDFI 298
Query: 299 L--GCPVIIGCIV 309
G +G +
Sbjct: 299 NGQGNQFKVGEKI 311
>gi|256830604|ref|YP_003159332.1| methionyl-tRNA formyltransferase [Desulfomicrobium baculatum DSM
4028]
gi|256579780|gb|ACU90916.1| methionyl-tRNA formyltransferase [Desulfomicrobium baculatum DSM
4028]
Length = 334
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 111/308 (36%), Positives = 159/308 (51%), Gaps = 10/308 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+VVFMGT +FA +L+ L+ +V VY QP RP G RG V A E LP
Sbjct: 9 LKVVFMGTPDFAAVSLRHLLDWGGCDVVGVYCQPDRPCG-RGQVCTPPPVKLLAMEARLP 67
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ L+ D+ +V AYGL++PQ +L+ +LG +N HASLLP +RGAA
Sbjct: 68 VFQPLNFKEQADVDQLAALEPDLLLVAAYGLILPQSVLDIPRLGAFNVHASLLPEYRGAA 127
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAIM G TGI IM M+ LDTG + R I L EL+ + +V+
Sbjct: 128 PIQRAIMDGRPVTGITIMHMEAGLDTGDILLQRSRAIGIMDTAQTLHDELAEMGGKLLVD 187
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++K+ Q L PQ TYA K+SK E R+++ + VHN IR L P+PG+W +
Sbjct: 188 ALEKMGQGRLVRIPQDHARATYAAKLSKEEGRIDWNQPVLTVHNRIRGLFPWPGSWFDWD 247
Query: 241 IG-NKHERIKLLESQLVE---GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
K R+ + + + +PGE+ + N IAC+ + ++ A + L
Sbjct: 248 GMPGKTLRLTVHPGTIGDPLPEGAQPGEIHGVADENVLIACADRLYAVPVIKPANSKPLR 307
Query: 294 IGDFLLGC 301
+F G
Sbjct: 308 GREFYCGY 315
>gi|108563504|ref|YP_627820.1| methionyl-tRNA formyltransferase [Helicobacter pylori HPAG1]
gi|123073743|sp|Q1CSC6|FMT_HELPH RecName: Full=Methionyl-tRNA formyltransferase
gi|107837277|gb|ABF85146.1| methionyl-tRNA formyltransferase [Helicobacter pylori HPAG1]
Length = 305
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 86/312 (27%), Positives = 139/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS---HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
+R+VFMGT FA L+ALV + +V ++TQ +P G R + E
Sbjct: 1 MRIVFMGTPGFAEVILRALVENKNNHIEVVGLFTQMDKPFG-RKKELKAPETKTYILENH 59
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
++P P L + E + D VVVAYG ++P+ +L N HASLLP++R
Sbjct: 60 LNIPIFQPQSLKEPEVQILKDLKPDFIVVVAYGKILPKEVLTIA--PCINAHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PI I+ D GI+ M MD LD+G + ++ L +L+ + A
Sbjct: 118 GASPIHEMILNDDRIYGISTMLMDLELDSGDILESASFLREDYLDLDALSLKLAHMGADL 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ + PQ T+ +KI+K + V F + + S +
Sbjct: 178 LFSTLKNFSSITRK--PQDHMQATFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEI 232
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ K + L+E++ EG+ E+ + C +G+VR+ LQ G + L D+
Sbjct: 233 FLENSLKLLEVGLVENEKSHKEGEILEIDEKGVLVGCLKGSVRVAWLQAVGKKPLKAKDY 292
Query: 298 LLGCPVIIGCIV 309
L G + IG I+
Sbjct: 293 LNGRRLKIGGIL 304
>gi|269959002|ref|YP_003328791.1| methionyl-tRNA formyltransferase [Anaplasma centrale str. Israel]
gi|269848833|gb|ACZ49477.1| methionyl-tRNA formyltransferase [Anaplasma centrale str. Israel]
Length = 310
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 99/293 (33%), Positives = 155/293 (52%), Gaps = 14/293 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+FMG+SEF+V TL+ L+ S H +++VYT+ P+PAG RG + VH A ++P
Sbjct: 1 MKVIFMGSSEFSVPTLEFLIGSQHEVLAVYTKAPKPAG-RGHLLTKTPVHAYADAHNVPV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E + + D +V +YG+++P+ +L + G N H SLLPRWRGAAP
Sbjct: 60 RSPASLSSDSERDIIEKYMPDAIIVASYGMILPRWMLEVPRFGCINVHPSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q AI++GD TG+ IM++++ LD G + PI S N L + LS + +++
Sbjct: 120 MQHAILSGDAVTGVTIMQLNERLDAGNIFLQESTPIGSRENIVALSERLSTMGGRMLLKV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D L+ Q + G TYA K E VNF +A+ + +RA P +L
Sbjct: 180 LDNLDTMRSVS--QDDAGATYAAK--PSEFCVNFNDAADYICRQVRAFYPRMFFFL---- 231
Query: 242 GNKHERIKLLESQLVEGEG-KPGEVINPNFTIACSQG-AVRIMRLQRAGGRVL 292
+R+KLLE+ E G + G+V+N I C G + +Q + L
Sbjct: 232 --DGKRVKLLEADNYELAGAQIGDVVNDELHIQCGNGTVLAPKIVQPEIKKAL 282
>gi|308063926|gb|ADO05813.1| methionyl-tRNA formyltransferase [Helicobacter pylori Sat464]
Length = 303
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 140/310 (45%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+R+VFMGT FA L+ALV +V ++TQ +P G R + E +
Sbjct: 1 MRIVFMGTPGFAEVILRALVKDKEIEVVGLFTQMDKPFG-RKKELKAPETKTYILENHLN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P L E + D VVVAYG ++P+ +L+ N HASLLP++RGA
Sbjct: 60 IPIFQPQSLKDSEVQILKDLKPDFIVVVAYGKILPKEVLSIA--PCINAHASLLPKYRGA 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI I+ D GI+ M MD LD+G + ++ L +L+ + A ++
Sbjct: 118 SPIHEMILNDDKIYGISTMLMDVGLDSGDILESTSFLREEYLDLDALSLKLAHMGATLLL 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ PQ ++ +KI+K + V F + + S + +
Sbjct: 178 STLKNFSSITRK--PQDHAQASFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEIFL 232
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K ++L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L
Sbjct: 233 ENSLKLLGVELVENEKSHKEGEILEIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKDYLN 292
Query: 300 GCPVIIGCIV 309
G + G I+
Sbjct: 293 GKRLKAGGIL 302
>gi|206895953|ref|YP_002246727.1| methionyl-tRNA formyltransferase [Coprothermobacter proteolyticus
DSM 5265]
gi|259646026|sp|B5Y7I0|FMT_COPPD RecName: Full=Methionyl-tRNA formyltransferase
gi|206738570|gb|ACI17648.1| methionyl-tRNA formyltransferase [Coprothermobacter proteolyticus
DSM 5265]
Length = 304
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 84/312 (26%), Positives = 150/312 (48%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ F + F + L+ L +H IV T+ P+G RGLK S A+ +P
Sbjct: 1 MKIAFFSSGTFGLPVLEELKKENHEIVL-ITKVDAPSG-RGLKLQPSPPAVVAEALQIPI 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ L + E + S DVA+VV +G IP+++ A K N H SLLP++RG PI
Sbjct: 59 VKVNSLKNDFIEWYFSQGFDVAIVVDFGFYIPKQLFQADKPVMVNIHPSLLPKYRGPNPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
+RAI +G+ ETG+ ++K+ + +D G + +V I + + L +L + + +
Sbjct: 119 RRAICSGELETGVTLIKISEKMDEGDIYLQERVLIDPDDDYVSLTPKLQHVSMELLKKFF 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+L+Q NL PQ +YA K + E +++ + A ++ N +RAL+
Sbjct: 179 LELKQGNLRAFPQ-LGDPSYAPKFTPDELWIDWQKPAHDIQNQVRALADVGAKTT----- 232
Query: 243 NKHERIKLLESQLV--EGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ +K+ + ++ E PG + + + QG++ I+ LQ+ G + D F+
Sbjct: 233 LGSKLVKIFKVRISGMEDSLPPGHYVAEKESLYVGTGQGSLEILSLQQEGRKKQDAASFV 292
Query: 299 LGCPVIIGCIVG 310
G G + G
Sbjct: 293 KGLREKEG-VFG 303
>gi|57238936|ref|YP_180072.1| methionyl-tRNA formyltransferase [Ehrlichia ruminantium str.
Welgevonden]
gi|58578869|ref|YP_197081.1| methionyl-tRNA formyltransferase [Ehrlichia ruminantium str.
Welgevonden]
gi|73919391|sp|Q5HBX2|FMT_EHRRW RecName: Full=Methionyl-tRNA formyltransferase
gi|57161015|emb|CAH57921.1| methionyl-tRNA formyltransferase [Ehrlichia ruminantium str.
Welgevonden]
gi|58417495|emb|CAI26699.1| Methionyl-tRNA formyltransferase [Ehrlichia ruminantium str.
Welgevonden]
Length = 303
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 96/309 (31%), Positives = 153/309 (49%), Gaps = 18/309 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R++FMG+ EF+V L +++++ H IV VYT+ P+PAG RG + +H A+ L
Sbjct: 1 MRIIFMGSPEFSVVALSSILNNTEHKIVGVYTRVPKPAG-RGKVLTKTPIHTVAEMHGLT 59
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P EE ++ N DV VVVAYGL+IP+ +L+ K G N H SLLPRWRGAA
Sbjct: 60 VYTPKSLKRIEEQDRIKELNPDVIVVVAYGLIIPKEVLSIPKYGCINIHPSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ GD++TG+ IM+M++ D G + +K+ I N L +LS L +VE
Sbjct: 120 PIHYAILHGDSQTGVTIMQMNEGWDEGDILLQKKLSIDEQDNIETLSSKLSNLGGAMLVE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ ++ + + ++ +AE IRAL P +
Sbjct: 180 VLNNIDNLVPVAQNEDNA----TYTNKIEDFHIDINETAEVACRRIRALYPRAFVFFN-- 233
Query: 241 IGNKHERIKLLESQLVE----GEGKPGEVINPNFTIACSQGAVRI-MRLQRAGGRVLDIG 295
+R+++L++ KP ++N I C + + + +Q G + I
Sbjct: 234 ----GKRLRILQASYYYDDNISSLKPSSILNSGMHIKCKGNTILVPLVVQMEGKTLCSIK 289
Query: 296 DFLLGCPVI 304
DF+ G V
Sbjct: 290 DFVCGYNVK 298
>gi|332673939|gb|AEE70756.1| methionyl-tRNA formyltransferase [Helicobacter pylori 83]
Length = 303
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 84/310 (27%), Positives = 139/310 (44%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+R+VFMGT FA L+ALV +V ++TQ +P G R + E +
Sbjct: 1 MRIVFMGTPGFAEVILRALVKDEEIKVVGLFTQMDKPFG-RKKELKAPETKTYILENHLN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P L + E + D VVVA G ++P+ +L N HASLLP++RGA
Sbjct: 60 IPIFQPQSLKEPEVQILKDLKPDFIVVVACGKILPKEVLTIA--PCINVHASLLPKYRGA 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI I+ D GI+ M MD LD+G + ++ L +L+ + A ++
Sbjct: 118 SPIHEMILNDDKIYGISTMLMDVGLDSGDILESASFLREDYLDLDALSLKLAHMGAALLL 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ PQ ++ +KI+K + V F + + + + +
Sbjct: 178 STLKNFSSITRK--PQDHAQASFCKKITKADGLVGFKDAKSLFLKSLAFKN---WPEIFL 232
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K ++L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L
Sbjct: 233 QNNLKLLGVELVENEKSHKEGEILEIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKDYLN 292
Query: 300 GCPVIIGCIV 309
G + G I+
Sbjct: 293 GKRLKAGGIL 302
>gi|293400538|ref|ZP_06644683.1| methionyl-tRNA formyltransferase [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305564|gb|EFE46808.1| methionyl-tRNA formyltransferase [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 309
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 100/301 (33%), Positives = 153/301 (50%), Gaps = 7/301 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT + A L+ L+ + ++ V TQP + AG R + +S V + A LP
Sbjct: 2 IKILFMGTPDIAQVMLKRLLKDGYDVIGVVTQPDKKAG-RKQQLKMSEVKQCALANHLPI 60
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P + EY++ L + D+ V AYG IPQ +L+A G N HASLLP+WRG API
Sbjct: 61 YQPLSIRS-EYQELLKLDMDLIVTCAYGQFIPQVLLDAPTYGSINVHASLLPKWRGGAPI 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
+AI+ GD E+G++IM+M K +D G V +V I+ T L ++L+V A + E++
Sbjct: 120 HKAIIEGDKESGMSIMRMVKKMDAGAVMAQCRVAITQEDTTGDLYEKLAVAGADLLSESI 179
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
K+ + Q E T+A I K E +NF + V++HIR L PFP +
Sbjct: 180 PKIIDGSAIFVEQKEEEATFAYTIQKEEEHINFQEDVQKVYDHIRGLIPFPVGNAIVK-- 237
Query: 243 NKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K + + + PGE+I + IA G + R+Q G +D F
Sbjct: 238 GKKIKFHKVRMMRCDHSYTPGEIIGWLEHGYAIAAKDGYILFDRIQMEGKAKVDAKSFYN 297
Query: 300 G 300
G
Sbjct: 298 G 298
>gi|187476717|ref|YP_784741.1| methionyl-tRNA formyltransferase [Bordetella avium 197N]
gi|123725123|sp|Q2L0K7|FMT_BORA1 RecName: Full=Methionyl-tRNA formyltransferase
gi|115421303|emb|CAJ47808.1| methionyl-tRNA formyltransferase [Bordetella avium 197N]
Length = 311
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 120/312 (38%), Positives = 159/312 (50%), Gaps = 15/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT EFA L+AL+++ H I V TQP RPAG RGLK S V + A +
Sbjct: 1 MRLVFAGTPEFARLALEALLAAGHEIPLVLTQPDRPAG-RGLKLTPSPVKEAALAAGIEV 59
Query: 63 LVPTKLGQEEYEQFL---------SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P L + + +V VV AYGL++P+ L G N HASLL
Sbjct: 60 AQPRSLRLDGRYPDEALAAQARLVAVAPEVMVVAAYGLILPRWTLALPARGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPIQRAI AGD TG+ IM+MD LDTG + R VPI + A L EL+ +
Sbjct: 120 PRWRGAAPIQRAIEAGDARTGVTIMQMDDGLDTGDMLLERTVPIGAETTAAVLHDELARV 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A A+ + L Q E G+TYA K+ K E + SAE + IRA +P P
Sbjct: 180 GAEAI--VAALADLPALAPRKQPEQGVTYAAKLDKAEAALKLDESAELLARRIRAFNPVP 237
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGR 290
GA L + N+ ++ E+ PG V+ IA QG +R++ LQ+AGG+
Sbjct: 238 GASLRLPGLNEPVKVWQAEALPESSPAAPGTVLRASAQGVDIATGQGVLRLLELQKAGGK 297
Query: 291 VLDIGDFLLGCP 302
F+ G
Sbjct: 298 RQSAEVFVRGWQ 309
>gi|326561733|gb|EGE12068.1| methionyl-tRNA formyltransferase [Moraxella catarrhalis 7169]
gi|326569045|gb|EGE19114.1| methionyl-tRNA formyltransferase [Moraxella catarrhalis BC1]
Length = 341
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 107/330 (32%), Positives = 159/330 (48%), Gaps = 37/330 (11%)
Query: 2 TLRVVFMGTSEFAVATLQALVS----SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
+R++F GT EFA +L+ L+ + IV+VYTQP R +G RG K SA+ + AQ
Sbjct: 8 KIRIIFAGTPEFAAVSLKHLIDLQDVLNIQIVAVYTQPDRKSG-RGQKLTASAIKQVAQV 66
Query: 58 FSLPALVPTKLGQEEYEQF-----------LSFNADVAVVVAYGLVIPQRILNATKLGFY 106
+++P P + + ++ D+ +V AYGL++P +L K G
Sbjct: 67 YNIPVEQPISFSLKYQPEQGVSGAVSRETLANYQPDIMIVAAYGLILPLGVLKIPKFGCL 126
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N HASLLPRWRGAAPIQRAIMAGD ETGI IM+M LDTG + + PI T L
Sbjct: 127 NIHASLLPRWRGAAPIQRAIMAGDQETGITIMQMATGLDTGDMLYRVSCPILDTDTTQTL 186
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L+V+ AHA+ + L Q ++ YAEKI E +++ + A + I
Sbjct: 187 HDKLAVIGAHAITTVLQNLLHFQSLAKVQDDSLANYAEKIHTQEGLIDWNQDALTIQRQI 246
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVE----GEGKPGEVI---NPNFTIACS---- 275
RA L +K ERIK+L + ++ G+++ ++C
Sbjct: 247 RA--------LNAHTYHKSERIKVLSALPIKFDQTTSIPAGQIVGVGKNAILVSCGADTN 298
Query: 276 --QGAVRIMRLQRAGGRVLDIGDFLLGCPV 303
Q + I +Q GG+ L +
Sbjct: 299 GIQHLINITSIQWPGGKPLTAEQICQTNKL 328
>gi|311086796|gb|ADP66877.1| methionyl-tRNA formyltransferase [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
Length = 297
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 100/296 (33%), Positives = 160/296 (54%), Gaps = 12/296 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++VF GT F+ L AL++SSH ++SV TQP R +G RG K S V + +P
Sbjct: 3 KLKIVFAGTEYFSAEHLHALITSSHDVISVITQPDRYSG-RGQKITFSPVKILSLNNGIP 61
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + L NAD+ VV+YG +IP++ILN G N HASLLPRWRGA
Sbjct: 62 IFQPENLNDTDFQNKLLKLNADIMTVVSYGKIIPKKILNMFSKGCINVHASLLPRWRGAT 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ +I+ GD +TGI+I++M+ +D+G + ISS T L +L + A++E
Sbjct: 122 PIQSSILHGDKKTGISIIQMNDEIDSGNIMHSITCSISSKDTTKTLSLKLIKIGIEALLE 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++K+ N + Q E + ++KI K + +++ SAE + IRA +P+P +
Sbjct: 182 VLEKIILNTVIYKKQNEKNVILSKKIYKKDALLDWNLSAEKLERLIRAFNPWPICYF--- 238
Query: 241 IGNKHERIKLLESQLV---EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGR 290
++++ IK+ +S+++ + GE+I I S + I +LQ G +
Sbjct: 239 -LSQNKNIKVWQSEVIPITQNNRSVGEIISYNKNGIQINTSHQILNIKKLQFPGKK 293
>gi|297623928|ref|YP_003705362.1| methionyl-tRNA formyltransferase [Truepera radiovictrix DSM 17093]
gi|297165108|gb|ADI14819.1| methionyl-tRNA formyltransferase [Truepera radiovictrix DSM 17093]
Length = 325
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 110/316 (34%), Positives = 164/316 (51%), Gaps = 15/316 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL-- 60
+RV G+ FA+ TL+AL+ H + V QP +PAG RG K V ++A+E L
Sbjct: 1 MRVALFGSPAFALPTLEALLQR-HEVALVVAQPDKPAG-RGYKLTPPPVAQRARELGLRL 58
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
K E DVAV AYG ++PQ +L+A K GF N HASLLP++RGAA
Sbjct: 59 EQPARLKGNAAFLELVRGLGLDVAVTAAYGKILPQALLDAPKHGFLNVHASLLPKYRGAA 118
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ G+ ETG++IM+ + LDTGPV R++ ++ + L L+ L A A+ E
Sbjct: 119 PIQWALIEGETETGVSIMQTEAGLDTGPVRLQRRLGVAPDDTAVTLFTRLAELGADALTE 178
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ LE LP +PQ E TYA ++K + RV + +A ++N R + +PG+W
Sbjct: 179 ALAALEAGTLPSAPQDEARATYAPLLTKADGRVRWEDAAAAIYNRYRGVFAWPGSWTP-- 236
Query: 241 IGNKHERIKLLESQLVEGEG-------KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLD 293
++ +K+LE V V T+A +GAV + +Q AG +D
Sbjct: 237 --HRGGTLKILEMSPVSAPAAARGAPGTVLAVGAEGVTVAAGEGAVLLRAVQPAGRGKMD 294
Query: 294 IGDFLLGCPVIIGCIV 309
+ G V +G +
Sbjct: 295 ARAWAGGYGVRVGERL 310
>gi|82701527|ref|YP_411093.1| methionyl-tRNA formyltransferase [Nitrosospira multiformis ATCC
25196]
gi|123740793|sp|Q2YC20|FMT_NITMU RecName: Full=Methionyl-tRNA formyltransferase
gi|82409592|gb|ABB73701.1| methionyl-tRNA formyltransferase [Nitrosospira multiformis ATCC
25196]
Length = 312
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 123/311 (39%), Positives = 178/311 (57%), Gaps = 7/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT FA A L+AL + H I V TQP RPAG RG+K+ SAV AQ+
Sbjct: 1 MRIIFAGTPPFAAAALEALADAGHEIALVLTQPDRPAG-RGMKNASSAVKLLAQKRGFGL 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P E + Q + AD+ VV AYGL++P +LN KLG N HASLLPRWRGAAP
Sbjct: 60 LQPPSLRQPELHMQLEAVRADIMVVAAYGLILPFSVLNIPKLGCVNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I+RAI+AGD ETGI IM+MD+ LDTGP+ +R + I+ + L ++L L A +VEA
Sbjct: 120 IERAILAGDRETGITIMQMDRGLDTGPILLVRSITIAKDDTAGTLHEKLGQLGAACIVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L+Q + +PQ + TYA K+ K E +++ AEN+ +RA +P PG +
Sbjct: 180 LALLQQGKIIATPQNDLAATYASKLEKTEAEIDWRMDAENIDRAVRAFNPRPGMHSTV-- 237
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
++ + E + KPGE++ +AC + A+ + +Q++GG+ L +FL
Sbjct: 238 NGISMKVWQTSVDIAETDEKPGEIVAIRPDGIVVACGKHALILKIVQKSGGKKLRSAEFL 297
Query: 299 LGCPVIIGCIV 309
LG +
Sbjct: 298 LGHSLHPHDRF 308
>gi|15612134|ref|NP_223786.1| methionyl-tRNA formyltransferase [Helicobacter pylori J99]
gi|6685432|sp|Q9ZK72|FMT_HELPJ RecName: Full=Methionyl-tRNA formyltransferase
gi|4155662|gb|AAD06649.1| METHIONYL-TRNA FORMYLTRANSFERASE [Helicobacter pylori J99]
Length = 305
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 144/312 (46%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSS---SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
+R+VFMGT FA L+ALV + +V ++TQ +P G R + E
Sbjct: 1 MRIVFMGTPSFAEVILRALVENEDKKIEVVGLFTQRDKPFG-RKKELKAPETKTYILENH 59
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
++P P L + E + D VVVAYG ++P+ +L N HASLLP++R
Sbjct: 60 LNIPIFQPQSLKEPEVQILKGLKPDFIVVVAYGKILPKEVLTIA--PCINLHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PI I+ D GI+ M MD LD+G + ++ L +L+ + A
Sbjct: 118 GASPIHEMILNDDRIYGISTMLMDLELDSGDILESASFLREDYLDLDALSLKLARMGATL 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
++ + +++ PQ ++ +KI+K + V F + + S +
Sbjct: 178 LLSTLKN--FHSITRKPQDHMQASFCKKIAKADGLVGFKDAKNLFLKSLAFKS---WPEI 232
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ K ++L+E++ EG+ + + C +G+VRI RLQ G + L D+
Sbjct: 233 FLENSLKLLEVELVENEKSHKEGEILAIDERGVLVGCLKGSVRIARLQAVGKKPLKAKDY 292
Query: 298 LLGCPVIIGCIV 309
L G + +G I+
Sbjct: 293 LNGRRLKVGGIL 304
>gi|291514072|emb|CBK63282.1| methionyl-tRNA formyltransferase [Alistipes shahii WAL 8301]
Length = 323
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 100/310 (32%), Positives = 153/310 (49%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+VFMGT EFA +L+ALV +++V V T P +PAG RG K S V A E LP
Sbjct: 6 LRIVFMGTPEFAAPSLRALVGGGYNVVGVVTSPDKPAG-RGQKIHQSEVKIAALELGLPV 64
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E+ + L +V ++P+ + +LG +N HASLLP++RGAAPI
Sbjct: 65 LQPEKLKAPEFVEALEALRPDLGIVIAFRMLPEVVWAMPRLGTFNLHASLLPQYRGAAPI 124
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ ETG+ ++ +D G + +VPI N L + L + E +
Sbjct: 125 NWAIINGETETGVTTFLLNHEIDKGGIIGQIRVPILPEDNVGTLYERLMTTGTSLVTETV 184
Query: 183 DKLEQNNLPLSPQ---IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
D++ + Q E + A KI K + R+++ + + N +R LSP+P AW EM
Sbjct: 185 DRIAAGEIRPVEQQHIDEATLRPAPKIFKEDCRIDWEKPGREIVNFVRGLSPYPAAWTEM 244
Query: 240 MIGNKHERI--KLLES--QLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVL 292
E K+ + + G + + +AC+ G + + LQ AG + L
Sbjct: 245 YREGDGEASSAKIFSASFEAAVHGEACGTLQSDGRTFIRVACADGWIALGELQIAGKKRL 304
Query: 293 DIGDFLLGCP 302
+ + LLG
Sbjct: 305 AVRELLLGWR 314
>gi|86160385|ref|YP_467170.1| methionyl-tRNA formyltransferase [Anaeromyxobacter dehalogenans
2CP-C]
gi|123750251|sp|Q2IGM4|FMT_ANADE RecName: Full=Methionyl-tRNA formyltransferase
gi|85776896|gb|ABC83733.1| methionyl-tRNA formyltransferase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 312
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 100/305 (32%), Positives = 144/305 (47%), Gaps = 6/305 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ F+GT FAVA L AL + H++V+V QP RPAG RG A A+ +
Sbjct: 1 MRIAFLGTPAFAVAALDALDRAGHALVAVVAQPDRPAG-RGQALREPATKAWARAHGVAV 59
Query: 63 LVPTKLGQ-EEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K+ + D VV AYG ++ + +L G N H SLLPRWRGAAP
Sbjct: 60 LQPEKVRDGTLAAALRALAPDALVVAAYGRILGKDLLTLAPHGAINVHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A+ G+ ETG+ IM+MD+ LDTG + R + + + + L L+ L A+ EA
Sbjct: 120 IQWAVAEGERETGVTIMQMDEGLDTGDILLQRALELREDDTSETLAPRLAALGGEALAEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE + Q T A + K + RV + A V + +R +P+PGA+ +
Sbjct: 180 LRLLEAGAIVPVRQDPAQATLARILEKEDGRVAWESPARRVADRLRGFTPWPGAFTTLEG 239
Query: 242 GNKHERIKLLESQLVEGEGKPGE---VINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDF 297
+ L G+PGE V +AC G A+ + R+Q G D
Sbjct: 240 RTLKVLEARPAADLAAPAGEPGEAEVVAGRGLAVACGGGTALLVTRVQLEGRPAQSALDL 299
Query: 298 LLGCP 302
G
Sbjct: 300 ANGLR 304
>gi|261838469|gb|ACX98235.1| methionyl-tRNA formyltransferase [Helicobacter pylori 51]
Length = 303
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 143/310 (46%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+R+VFMGT FA L+ALV +V ++TQ +P G R + E +
Sbjct: 1 MRIVFMGTPGFAEVILRALVKDEEIKVVGLFTQMDKPFG-RKKELKAPETKTYILENHLN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P L + E + + D VVVAYG ++P+ +L+ N HASLLP++RGA
Sbjct: 60 IPIFQPQSLKESEVQILKALKPDFIVVVAYGKILPKEVLSIA--PCINVHASLLPKYRGA 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI I+ D GI+ M MD LD+G + ++ L+ +L+ + A ++
Sbjct: 118 SPIHEMILNDDKIYGISTMLMDVGLDSGDILESASFLREDYLDLETLRSKLAHMGATLLL 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ PQ ++ +KI+K + V F + + S + +
Sbjct: 178 STLKNFSSITRK--PQDHAQASFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEIFL 232
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K ++L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L
Sbjct: 233 ENSLKLLGVELVENEKSHKEGEILEIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKDYLN 292
Query: 300 GCPVIIGCIV 309
G + G I+
Sbjct: 293 GKRLKAGGIL 302
>gi|317014527|gb|ADU81963.1| methionyl-tRNA formyltransferase [Helicobacter pylori Gambia94/24]
Length = 305
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 87/312 (27%), Positives = 140/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALV---SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
+R+VFMGT FA L+ALV + +V ++TQ +P G R + E
Sbjct: 1 MRIVFMGTPSFAEVILRALVEDKDNHIEVVGLFTQRDKPFG-RKKELKAPETKTYILENH 59
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
++P P L + E + D VVVAYG ++P+ +L N HASLLP++R
Sbjct: 60 LNIPIFQPQSLKEPEVQILKGLKPDFIVVVAYGKILPKEVLAIA--PCINAHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PI I+ D GI+ M MD LD+G + ++ L +L+ + A
Sbjct: 118 GASPIHEMILNDDRIYGISTMLMDLELDSGDILESVSFLREDYLDLDALSLKLAHMGADL 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
++ + PQ T+ +KI+K + V F + + S +
Sbjct: 178 LLSTLKNFSSITRK--PQDHMQATFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEI 232
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ K + L+E++ EG+ + + C +G+VRI RLQ G + L D+
Sbjct: 233 FLENNLKLLEVGLVENEKSHKEGEILAIDERGVLVGCLKGSVRIARLQAVGKKPLKAKDY 292
Query: 298 LLGCPVIIGCIV 309
L G + IG I+
Sbjct: 293 LNGRRLKIGGIL 304
>gi|332675598|gb|AEE72414.1| methionyl-tRNA formyltransferase [Propionibacterium acnes 266]
Length = 315
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 106/320 (33%), Positives = 164/320 (51%), Gaps = 19/320 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R++F GT + AV TL ALV+ H + ++ T+P G R V K A+E +P
Sbjct: 1 MRLLFAGTPDVAVPTLTALVADPRHEVAAILTRPDAAVG-RHRTPRPCPVAKAAEELGIP 59
Query: 62 -ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ E ++ S +ADVAVVVAYG +IP +L + G+ N H SLLPRWRGAA
Sbjct: 60 AIKATSVKSGEGHDAVTSLDADVAVVVAYGGLIPADLLEVPRHGWINLHFSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAIMAGD E G + ++ + LD GPV VPI L EL+ ++E
Sbjct: 120 PIQRAIMAGDEEAGACVFQLVESLDAGPVYRTMTVPIGPMTTAGELLDELAHTATPLVIE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ +E P +PQ G+T A +I + RV +A+ + N +R +SP PGAW E+
Sbjct: 180 ALEDIEAGVEP-TPQSVEGVTIAPQIHPDDVRVTVTAAAQEIDNLVRGVSPTPGAWAEL- 237
Query: 241 IGNKHERIKLLESQLVE---------GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGG 289
+R K+L ++ +E +PG+++ + + ++++Q G
Sbjct: 238 ---DGKRFKILRTRCLEAGDGVPSTVATAQPGQLVATRKQLFLGTGSQPLELLQVQAFGK 294
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
R + D+ G + G +
Sbjct: 295 RAMSGADWARGADIDAGTRL 314
>gi|149011397|ref|ZP_01832644.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP19-BS75]
gi|147764387|gb|EDK71318.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP19-BS75]
Length = 280
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 81/283 (28%), Positives = 136/283 (48%), Gaps = 10/283 (3%)
Query: 33 TQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLV 92
TQP R G R + V + A+E L P KL + L +V A
Sbjct: 2 TQPDRAVG-RKKVIQETPVKQAAKEAGLSIYQPEKLSGSPEMEDLMKLGADGIVTAAFGQ 60
Query: 93 IPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFM 152
L + N HASLLPR RG API A++ GD E G+ IM+M K +D G +
Sbjct: 61 FLPSKLLDSMDFAVNVHASLLPRHRGGAPIHYALIQGDEEAGVTIMEMVKEMDAGDMISR 120
Query: 153 RKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETR 212
R +PI+ N L ++L+++ +++ + ++ PQ + +T++ I E +
Sbjct: 121 RSIPITDEDNVGTLFEKLALVGRDLLLDTLPAYIAGDIKPEPQDTSQVTFSPNIKPEEEK 180
Query: 213 VNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPN 269
+++ ++ + N IR ++P+P A + R K+ E+ VEG+G PGE++
Sbjct: 181 LDWNKTNRQLFNQIRGMNPWPVAHTFLKGD----RFKIYEALPVEGQGNPGEILSIGKKE 236
Query: 270 FTIACSQGAVRIMRLQRAGGRVLDIGDFLL--GCPVIIGCIVG 310
+A ++GA+ + ++Q AG +DI FL G + +G G
Sbjct: 237 LIVATAEGALSLKQVQPAGKPKMDIASFLNGVGRTLTVGERFG 279
>gi|50235446|gb|AAT70830.1| methionyl-tRNA formyltransferase [Borrelia hermsii]
Length = 309
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 82/311 (26%), Positives = 136/311 (43%), Gaps = 7/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ F + A+ L+ V+ H++V V T P +P+G RGL + + +A ++
Sbjct: 1 MRIFFASSESIALGVLKK-VADQHNVVGVLTAPDKPSG-RGLFLRANDIKVEATNRNITV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P L + E N D+ +V +YG + Q L+ +G N H SLLP++RG +PI
Sbjct: 59 LDPVVLNSDVVEIVKRLNPDLMLVFSYGKIFRQEFLDIFPMGCINVHPSLLPKYRGPSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD GI + KM +D+G + + I S +A + L + +V
Sbjct: 119 QTAILNGDTVGGITVQKMALEMDSGNILSQSQFEIKSFNTSADIF-RYVSLNSFNLVLEA 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
Q TY +K ++F SA + N I A +P+P A ++
Sbjct: 178 LSKLDKGNIGIEQDSRQATYCSFFNKQHRILDFNLSAFEIKNKINACNPWPLARAKLDDD 237
Query: 243 NKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ G++I + + G + ++ LQRAG +V+D F
Sbjct: 238 EIIFHRADFIRTNDYSDQAIGKIILFDPSRGILVKTGDGILLLLELQRAGRKVMDYKSFY 297
Query: 299 LGCPVIIGCIV 309
G +IG I
Sbjct: 298 NGNRDLIGKIF 308
>gi|58616927|ref|YP_196126.1| methionyl-tRNA formyltransferase [Ehrlichia ruminantium str.
Gardel]
gi|73919390|sp|Q5FFG4|FMT_EHRRG RecName: Full=Methionyl-tRNA formyltransferase
gi|58416539|emb|CAI27652.1| Methionyl-tRNA formyltransferase [Ehrlichia ruminantium str.
Gardel]
Length = 303
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 18/309 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R++FMG+ EF+V L +++++ H IVSVYT+ P+PAG RG + +H A+ L
Sbjct: 1 MRIIFMGSPEFSVVALSSILNNTEHKIVSVYTRVPKPAG-RGKVLTKTPIHTVAEMHGLT 59
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P EE ++ N DV VVVAYGL+IP+ +L+ K G N H SLLPRWRGAA
Sbjct: 60 VYTPKSLKRIEEQDRIKELNPDVIVVVAYGLIIPKEVLSIPKYGCINIHPSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ GD++TG+ IM+M++ D G + +K+ I N L +LS L +VE
Sbjct: 120 PIHYAILHGDSQTGVTIMQMNEGWDEGDILLQKKLSIDEQDNIETLSNKLSNLGGAMLVE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ ++ + + ++ +AE IRAL P +
Sbjct: 180 VLNNIDNLVPVAQNEDNA----TYTNKIEDFHIDINETAEVACRRIRALYPRAFVFFN-- 233
Query: 241 IGNKHERIKLLESQL----VEGEGKPGEVINPNFTIACSQGAVRI-MRLQRAGGRVLDIG 295
+R+++L++ KP ++N I C + + + +Q G + I
Sbjct: 234 ----GKRLRILQASYYYDDSISSLKPSSILNSGMHIKCKGNTILVPLVVQMEGKTLCSIK 289
Query: 296 DFLLGCPVI 304
DF+ G V
Sbjct: 290 DFVCGYNVK 298
>gi|210135300|ref|YP_002301739.1| methionyl-tRNA formyltransferase [Helicobacter pylori P12]
gi|229487496|sp|B6JMY1|FMT_HELP2 RecName: Full=Methionyl-tRNA formyltransferase
gi|210133268|gb|ACJ08259.1| methionyl-tRNA formyltransferase [Helicobacter pylori P12]
Length = 305
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 142/312 (45%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS---HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
+R+VFMGT FA L+ALV + +V ++TQ +P G R + E
Sbjct: 1 MRIVFMGTPGFAEVILRALVENKNNHIEVVGLFTQRDKPFG-RKKELKAPETKTYILENR 59
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
++P P L + E + D VVVAYG ++P+ IL N HASLLP++R
Sbjct: 60 LNIPIFQPQSLKEPEVQILKDLKPDFIVVVAYGKILPKEILAIA--PCINVHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PI I+ D GI+ M MD LD+G + ++ L +L+ + A
Sbjct: 118 GASPIHEMILNDDKIYGISTMLMDLELDSGDILESASFLREDYLDLDALSLKLAHMGATL 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
++ + +++ PQ T+ +KI+K + V F + + S +
Sbjct: 178 LLSTLKN--FHSITRKPQDHTQATFCKKITKADGLVGFKDAKNLFLKSLAFKS---WPEI 232
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ K ++L+E++ EG+ + + C +G+V I LQ G + L D+
Sbjct: 233 FLENNLKLLEVELVENEKSHKEGEILRIDEKGVLVGCLKGSVCIAWLQAVGKKPLKAKDY 292
Query: 298 LLGCPVIIGCIV 309
L G + +G I+
Sbjct: 293 LNGKRLKVGGIL 304
>gi|317009753|gb|ADU80333.1| methionyl-tRNA formyltransferase [Helicobacter pylori India7]
Length = 305
Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 84/312 (26%), Positives = 140/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS---HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
+R+VFMGT FA L+ALV + +V ++TQ +P G R + E
Sbjct: 1 MRIVFMGTPGFAEVILRALVENKNNHIEVVGLFTQRDKPFG-RKKELKAPETKTYILENH 59
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
++P P L + + + D VVVAYG ++P+ +L N HASLLP++R
Sbjct: 60 LNIPIFQPQSLKEPDVQILKDLKPDFIVVVAYGKILPKEVLAIA--PCINVHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PI I+ D GI+ M MD LD+G + +N L +L+ + A
Sbjct: 118 GASPIHEMILNDDRIYGISTMLMDVELDSGDILESASFLREDYLNLDALSLKLAHMGADL 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
++ + Q ++ +KI+K + V F + + S +
Sbjct: 178 LLSTLKNFSSITRKS--QDHMQASFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEI 232
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ K ++L+E++ EG+ + + C +G+VRI RLQ G + L D+
Sbjct: 233 FLENSLKLLEVELVENEKSHKEGEILRIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKDY 292
Query: 298 LLGCPVIIGCIV 309
L G + +G I+
Sbjct: 293 LNGKRLKVGGIL 304
>gi|309809897|ref|ZP_07703745.1| methionyl-tRNA formyltransferase [Lactobacillus iners SPIN
2503V10-D]
gi|308169685|gb|EFO71730.1| methionyl-tRNA formyltransferase [Lactobacillus iners SPIN
2503V10-D]
Length = 314
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 98/313 (31%), Positives = 166/313 (53%), Gaps = 13/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT +F LQ L+ + I +V TQP + G R + S V K A +L
Sbjct: 4 VIFLGTPKFGAVVLQGLIDQGYKIEAVVTQPDKKFG-RKQELHQSEVKKVALANNLKIYQ 62
Query: 65 P-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P EE + LS D V AYG +P + L K+ N H SLLP++RG APIQ
Sbjct: 63 PLHLSKSEEMNELLSIRPDFIVTAAYGQFLPTKFLQTAKIKAINVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD +TG+ I++M K +D G + R + IS + + L ++LS++ ++E +
Sbjct: 123 YSLINGDKQTGVTIIEMVKKMDAGEMYGSRAIDISDDDTSGSLFEKLSIIGRDLLLEVIP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ N + + Q E+ + ++ ISKG+ ++ +A HN +RALSP PGA+ I
Sbjct: 183 KIIANQIVPTSQDEDKVVFSPNISKGQEQIKTSMTATQAHNLVRALSPQPGAY----ILM 238
Query: 244 KHERIKLLESQLV--EGEGKPGEVINPN--FTIACSQGAV-RIMRLQRAGGRVLDIGDFL 298
++R K+ +S++ + + G +++ N F I+ S G + +I+ +Q G + + I DF+
Sbjct: 239 HNKRYKIWQSEVSAEKCSLESGYLVSKNKEFAISFSNGTILKILNIQPTGKKPIAIKDFI 298
Query: 299 L--GCPVIIGCIV 309
G +G +
Sbjct: 299 NGQGNQFKVGEKI 311
>gi|256544907|ref|ZP_05472278.1| methionyl-tRNA formyltransferase [Anaerococcus vaginalis ATCC
51170]
gi|256399406|gb|EEU13012.1| methionyl-tRNA formyltransferase [Anaerococcus vaginalis ATCC
51170]
Length = 319
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 81/316 (25%), Positives = 156/316 (49%), Gaps = 13/316 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+ + FMG+ +F++ TL L + + ++ V + + R K + V + A + ++
Sbjct: 10 KINICFMGSPKFSLETLDILNKNENINLSLVVSGKDKKRNR--NKFKPTVVKQYALDNNI 67
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P + +E+ N D VVVA+G +I +++L K N H S LP++RG+
Sbjct: 68 EVVTPDSVNTDEFINLLKEKNIDYIVVVAFGQLIKEKLLEEYKNKIINLHPSSLPKYRGS 127
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+P+Q +++ GD +T + M ++K +D+G + ++V I + + L ++LS + + ++
Sbjct: 128 SPVQFSLLNGDKKTHASAMLIEKGMDSGDIINQKEVEIKAEDDFTSLSEKLSKIGSEVIL 187
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E++ + Q + T+ +KI+K +++F +S E + N IRA FP A+
Sbjct: 188 ESVLNYDDFMKNRIKQDNDKATFTKKITKEMGKIDFNQSKEEIINKIRAFVEFPKAYFSY 247
Query: 240 MIGNKHERIKLLESQLVE-GEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDI 294
N +K+L++ VE K V I C G +R+ ++Q G + +D
Sbjct: 248 KNEN----VKILKASPVEIENSKISFVYKANKNDKIIIGCKNGGIRVEKIQFPGKKAMDT 303
Query: 295 GDFLLGCPVIIGCIVG 310
FLLG G +G
Sbjct: 304 RSFLLGNDFEEGIYLG 319
>gi|309803144|ref|ZP_07697241.1| methionyl-tRNA formyltransferase [Lactobacillus iners LactinV
11V1-d]
gi|315653702|ref|ZP_07906622.1| methionyl-tRNA formyltransferase [Lactobacillus iners ATCC 55195]
gi|308164652|gb|EFO66902.1| methionyl-tRNA formyltransferase [Lactobacillus iners LactinV
11V1-d]
gi|315489064|gb|EFU78706.1| methionyl-tRNA formyltransferase [Lactobacillus iners ATCC 55195]
Length = 314
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 96/313 (30%), Positives = 165/313 (52%), Gaps = 13/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT +F LQ L+ + I +V TQP + G R + S V K A +L
Sbjct: 4 VIFLGTPKFGAVVLQGLIDQGYKIEAVVTQPDKKFG-RKQELHQSEVKKVALANNLKIYQ 62
Query: 65 P-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P EE + LS D V AYG +P + L K+ N H SLLP++RG APIQ
Sbjct: 63 PLHLSKSEEMNELLSIRPDFIVTAAYGQFLPTKFLQTAKIKAINVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD +TG+ I++M K +D G + R + IS + + L ++LS++ ++E +
Sbjct: 123 YSLINGDKQTGVTIIEMVKKMDAGEMYGSRAIDISDDDTSGSLFEKLSIIGRDLLLEVIP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ N + + Q E+ + ++ ISK + ++ +A HN +RAL+P PGA+ I
Sbjct: 183 KIIANQIVPTGQDEDKVVFSPNISKDQEQIKTSMTATQAHNLVRALNPQPGAY----ILM 238
Query: 244 KHERIKLLESQLV--EGEGKPGEVINPN--FTIACSQGAV-RIMRLQRAGGRVLDIGDFL 298
++R K+ +S++ + + G +++ N F I+ S G + +I+ +Q G + + I DF+
Sbjct: 239 HNKRYKIWQSEVSAEKCSLESGYLVSKNKEFAISFSNGTILKILNIQPTGKKPIAIKDFI 298
Query: 299 L--GCPVIIGCIV 309
G +G +
Sbjct: 299 NGQGNQFKVGEKI 311
>gi|118474253|ref|YP_892668.1| methionyl-tRNA formyltransferase [Campylobacter fetus subsp. fetus
82-40]
gi|166214885|sp|A0RR35|FMT_CAMFF RecName: Full=Methionyl-tRNA formyltransferase
gi|118413479|gb|ABK81899.1| methionyl-tRNA formyltransferase [Campylobacter fetus subsp. fetus
82-40]
Length = 304
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 73/315 (23%), Positives = 141/315 (44%), Gaps = 18/315 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE-- 57
M +VFMGT ++A L+A++ + +++V+V+TQP RP G R V K +
Sbjct: 1 MK-NIVFMGTPDYASVILEAILKNGGYNVVAVFTQPDRPVG-RKAILTPPEVKKTVLQSG 58
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+P P L + +VVA I + + N HASLLP++R
Sbjct: 59 LDIPIFQPLNLKDSSTVNDIKALKPNFIVVAAYGQILPKDILDIA-PCINLHASLLPKFR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PIQ AI+ G+ +G+ M+M LD G + + I + ++ + +
Sbjct: 118 GASPIQEAILRGELLSGVTAMRMGVGLDDGDILGFSVIEIPNLKSSQLFCELAKMAAKLT 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ + + + + + K ++ + + + RA P+PG +L
Sbjct: 178 IKILNEFESISPIAQFHALSSKCGKVHKEDGLIDI--KLQTPKIIESKFRAYYPWPGLYL 235
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDI 294
E + K+ + ++ +G+ G V++ FTI + G+++I LQ +G ++++
Sbjct: 236 ENGV-------KIWDMEISNLKGENGYVLSIDYDGFTIGVNGGSIKIKSLQESGKKMVNA 288
Query: 295 GDFLLGCPVIIGCIV 309
D++ G + +G
Sbjct: 289 KDYINGKRLGVGSKF 303
>gi|289428520|ref|ZP_06430204.1| methionyl-tRNA formyltransferase [Propionibacterium acnes J165]
gi|289158214|gb|EFD06433.1| methionyl-tRNA formyltransferase [Propionibacterium acnes J165]
Length = 315
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 106/320 (33%), Positives = 164/320 (51%), Gaps = 19/320 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R++F GT + AV TL ALV+ H + ++ T+P G R V K A+E +P
Sbjct: 1 MRLLFAGTPDVAVPTLTALVADPRHEVAAILTRPDAAVG-RHRTPRPCPVAKAAEELGIP 59
Query: 62 -ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ E ++ S +ADVAVVVAYG +IP +L + G+ N H SLLPRWRGAA
Sbjct: 60 AIKATSVKSGEGHDAVTSLDADVAVVVAYGGLIPADLLAVPRHGWINLHFSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAIMAGD E G + ++ + LD GPV VPI L EL+ ++E
Sbjct: 120 PIQRAIMAGDEEAGACVFQLVESLDAGPVYRTMTVPIGPMTTAGELLDELAHTATPLVIE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ +E P +PQ G+T A +I + RV +A+ + N +R +SP PGAW E+
Sbjct: 180 ALEDIEAGVEP-TPQSVEGVTIAPQIHPDDVRVTVTAAAQEIDNLVRGVSPTPGAWAEL- 237
Query: 241 IGNKHERIKLLESQLVE---------GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGG 289
+R K+L ++ +E +PG+++ + + ++++Q G
Sbjct: 238 ---DGKRFKILRTRCLEAGDGVPSTVATAQPGQLVATRKQLFLGTGSQPLELLQVQAFGK 294
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
R + D+ G + G +
Sbjct: 295 RAMSGADWARGADIDAGTRL 314
>gi|41407231|ref|NP_960067.1| methionyl-tRNA formyltransferase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|73919408|sp|Q741F8|FMT_MYCPA RecName: Full=Methionyl-tRNA formyltransferase
gi|41395582|gb|AAS03450.1| Fmt [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 315
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 97/316 (30%), Positives = 150/316 (47%), Gaps = 19/316 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+ L+ L+ S H +++V T+P +GRRG K S V ++A + +P
Sbjct: 1 MRLVFAGTPEPALPALRRLLDSPRHEMIAVLTRPDAASGRRG-KPEPSPVAREALDRGIP 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + E+ L+ D VVAYG ++ +L G+ N H SLLP WRGAA
Sbjct: 60 VLRPARPNSPEFVAELAQLAPDCCAVVAYGALLRDELLAVPPHGWINLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG + +++ LD+GP+ + I L L+V A +
Sbjct: 120 PVQAAIAAGDIITGASTFRIEPALDSGPIYGVVTEAIRPTDTAGELLARLAVSGAELLSA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + + L PQ G++ A KI+ + RV + A V IRA++P PGAW +
Sbjct: 180 TLDGIADSTLTPRPQPAEGVSIAPKITVEQARVRWDLPAPVVERRIRAVTPNPGAWTVIS 239
Query: 241 IGNKHERIKLLESQLVEGE-----------GKPGEVINPNFTIACSQGAVRIMRLQRAGG 289
RIKL +L G V + + VR+ ++Q G
Sbjct: 240 D----LRIKLGPVRLGAASDLPAPPEPLPPGAI-HVDRKSVWVGTGSDPVRLGQIQPPGK 294
Query: 290 RVLDIGDFLLGCPVII 305
+ ++ D+ G +
Sbjct: 295 KFMNAVDWARGARLDP 310
>gi|282853851|ref|ZP_06263188.1| methionyl-tRNA formyltransferase [Propionibacterium acnes J139]
gi|282583304|gb|EFB88684.1| methionyl-tRNA formyltransferase [Propionibacterium acnes J139]
Length = 315
Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 107/320 (33%), Positives = 164/320 (51%), Gaps = 19/320 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R++F GT + AV TL ALV+ H + +V T+P G R V K A+E +P
Sbjct: 1 MRLLFAGTPDVAVPTLTALVADPRHEVAAVLTRPDAAVG-RHRTPRPCPVAKAAEELGIP 59
Query: 62 -ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ E ++ S + DVAVVVAYG +IP +L + G+ N H SLLPRWRGAA
Sbjct: 60 AIKATSVKSGEGHDAITSLDVDVAVVVAYGGLIPANLLAVPRHGWINLHFSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRAIMAGD ETG + ++ + LD GPV VPI L EL+ ++E
Sbjct: 120 PIQRAIMAGDEETGACVFQLVESLDAGPVYRTMTVPIGPMTTAGELLDELAHTATPLVIE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A++ +E P +PQ G+T A +I + RV +A+ + N +R +SP PGAW E+
Sbjct: 180 ALEDIEAGVEP-TPQSVEGVTIAPQIHPDDVRVTVTAAAQEIDNLVRGVSPAPGAWAEL- 237
Query: 241 IGNKHERIKLLESQLVE---------GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGG 289
+R K+L ++ +E +PG+++ + + ++++Q G
Sbjct: 238 ---DGKRFKILRTRCLEAGDGVPSTVATAQPGQLVATRKQLFLGTGSQPLELLQVQAFGK 294
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
R + D+ G + G +
Sbjct: 295 RAMSGADWARGADIDAGTRL 314
>gi|317012918|gb|ADU83526.1| methionyl-tRNA formyltransferase [Helicobacter pylori Lithuania75]
Length = 303
Score = 136 bits (341), Expect = 6e-30, Method: Composition-based stats.
Identities = 84/310 (27%), Positives = 138/310 (44%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+R+VFMGT FA L+ALV +V ++TQ +P G R + E +
Sbjct: 1 MRIVFMGTPGFAEVILRALVRDKDIEVVGLFTQRDKPFG-RKKELKAPETKTYILENHLN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P L + E + D VVVAYG ++P+ +L N HASLLP++RGA
Sbjct: 60 IPIFQPQSLKEPEVQILKDLKPDFIVVVAYGKILPKEVLAIA--PCINVHASLLPKYRGA 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI I+ D GI+ M MD LD+G + ++ L +L+ + A ++
Sbjct: 118 SPIHEMILNDDRIYGISTMLMDVELDSGDILESASFLRGDYLDLETLSLKLAHMGADLLL 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ Q ++ +KI+K + V F + + S + +
Sbjct: 178 STLKNFSSITRKS--QDHMQASFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEIFL 232
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K ++L+E++ EG+ + + C +G+VRI RLQ G + L D+L
Sbjct: 233 ENSLKLLDVELVENEKSHKEGEILRIDEKGVLVGCLKGSVRIARLQAVGKKPLRAKDYLN 292
Query: 300 GCPVIIGCIV 309
G + G I+
Sbjct: 293 GKRLKAGDIL 302
>gi|118587054|ref|ZP_01544484.1| methionyl-tRNA formyltransferase [Oenococcus oeni ATCC BAA-1163]
gi|118432464|gb|EAV39200.1| methionyl-tRNA formyltransferase [Oenococcus oeni ATCC BAA-1163]
Length = 316
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 104/315 (33%), Positives = 173/315 (54%), Gaps = 14/315 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT V+F GTS+F+ A LQ L+ +++V +QP RP G R + + + A E+
Sbjct: 1 MTNSVIFFGTSDFSRAVLQGLIADDDFEVIAVVSQPDRPVG-RKKLLQPTKIKQLALEYR 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P K EE ++ +S AD V A+G +P ++L + K+ N HASLLP++RG
Sbjct: 60 IPIFQPEKLSRSEEMDRLISMQADFLVTAAFGQFVPSKLLKSAKIASINVHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPI A++ GD ETG++IM M K +D G + ++K+PI N N L ++L+V+ +
Sbjct: 120 AAPINWALINGDKETGVSIMYMVKEMDAGDIISVKKMPIEENDNAGSLFEKLAVVGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRV-NFCRSAENVHNHIRALSPFPGAWL 237
++ M K+ ++ Q E IT A KI T + + + AE + + IR LSP PGA L
Sbjct: 180 LKTMPKMVSGDISPIQQDEEKITLAPKIDYKLTELDFYHQKAEKIVDLIRGLSPKPGASL 239
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEV---INPNFTIACSQG-AVRIMRLQRAGGRVLD 293
++ E+IK+ ++++ +G+ G + + I + G V + +Q G +++D
Sbjct: 240 QIAD----EKIKVFKAKIGPCQGEVGSIAIKSKHDLAITAADGRTVFLQEIQPIGKKIMD 295
Query: 294 IGDFLLGC--PVIIG 306
+ FL G + +G
Sbjct: 296 VSSFLNGAGQKLHVG 310
>gi|170016868|ref|YP_001727787.1| methionyl-tRNA formyltransferase [Leuconostoc citreum KM20]
gi|169803725|gb|ACA82343.1| Methionyl-tRNA formyltransferase [Leuconostoc citreum KM20]
Length = 323
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 105/310 (33%), Positives = 165/310 (53%), Gaps = 14/310 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT VV MGT +FAV L+ALV ++ +++V TQP RP G R S V A
Sbjct: 1 MTHTVVLMGTPQFAVPILEALVADDNYHVLAVVTQPDRPQG-RKHILTPSPVKVAALAHK 59
Query: 60 LPALVPTKL-GQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP L P K+ G E Q +++ D + A+G +P ++L A ++ N HASLLP++RG
Sbjct: 60 LPVLQPEKIAGSSEMAQIINWQPDFIITAAFGQFLPTKLLAAAQIAAVNTHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP+ AIM GDNETG++IM M K +D G V + KVPI+S N + +LS+ +
Sbjct: 120 GAPVHYAIMNGDNETGVSIMYMVKEMDAGDVIDVVKVPITSTDNVGTMFDKLSLAGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFC-RSAENVHNHIRALSPFPGAWL 237
+ + K+ N+ Q + +T++ I + +NF +A+ + H+R L P A++
Sbjct: 180 LATLPKIVAGNISPVKQAIDDVTFSPNIPHDKQNLNFEVETAKQLDWHVRGLYPTHPAYV 239
Query: 238 EMMIGNKHERIKLLESQLVE--GEGKPGEVINPN---FTIACSQG-AVRIMRLQRAGGRV 291
++ +RIK+ + Q ++ G V+ N IA + +R++RLQ AG
Sbjct: 240 QVAG----QRIKITQVQPLDETTTQPAGYVVEKNKKELKIAAANHTVLRVLRLQPAGKSE 295
Query: 292 LDIGDFLLGC 301
+ I +L G
Sbjct: 296 MPIQAYLNGA 305
>gi|193213194|ref|YP_001999147.1| methionyl-tRNA formyltransferase [Chlorobaculum parvum NCIB 8327]
gi|193086671|gb|ACF11947.1| methionyl-tRNA formyltransferase [Chlorobaculum parvum NCIB 8327]
Length = 307
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 76/303 (25%), Positives = 138/303 (45%), Gaps = 11/303 (3%)
Query: 8 MGTSEFAVATLQALVSS--SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
MGT +FAV +L+ +V+ V V T +P + + V + A E LP
Sbjct: 1 MGTPQFAVPSLRRIVAMSPEFETVLVVTGCDKPRRSKNSPPEPTPVKQAALELGLPVFEA 60
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
+ E+ + ++ + +VVA ++P + LG +N H SLLP +RGAAP+ +
Sbjct: 61 DDVTTPEFAEKVAESKPDVIVVAAFRILPPAVFELPPLGTFNLHGSLLPAYRGAAPVNWS 120
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
I+ GD ETG+ + + +DTG + PI N + L + LS + A + + +
Sbjct: 121 IINGDAETGVTTFFLQQSVDTGNIITSDSTPIGPEENASELLERLSEIGAGTLERTLRMI 180
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKH 245
++ Q + T A K+ + TR+++ + + +H+ IR L+ P AW N
Sbjct: 181 ASGSVTPEKQDDRLATKAPKLHRRNTRIDWNQPVQRLHDFIRGLAMRPTAWTTFGGKN-- 238
Query: 246 ERIKLLESQL---VEGEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+K+ ++ E PG + + +A S G + ++ +Q G + ++ F G
Sbjct: 239 --LKIYRARPFDGAESSEAPGMLRIEDGRLLVAGSDGWLELLTVQAEGKKAMEAESFARG 296
Query: 301 CPV 303
Sbjct: 297 LRF 299
>gi|269123157|ref|YP_003305734.1| methionyl-tRNA formyltransferase [Streptobacillus moniliformis DSM
12112]
gi|268314483|gb|ACZ00857.1| methionyl-tRNA formyltransferase [Streptobacillus moniliformis DSM
12112]
Length = 308
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 99/313 (31%), Positives = 171/313 (54%), Gaps = 12/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP- 61
++ +FMGT +FA+ TL+ L ++ +++V+T+ + RG K V S V + A + ++
Sbjct: 1 MKTIFMGTPDFAIETLKYLHENT-ELLAVFTKVDK-INARGNKVVFSPVKQYALDNNIEI 58
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ +E YE +NAD+ VVVAYG++IP+ I++ K G N H+SLLP++RGAAP
Sbjct: 59 VQPKSLRTEEIYEILKKYNADLIVVVAYGMIIPKNIIDLPKYGIINVHSSLLPKYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD++TG++IM +++ LD G + + I N L L +L A + +A
Sbjct: 119 IHAAILNGDDKTGVSIMYINEKLDEGDIICTLETEILKEDNLGSLHDRLKMLGALGVKQA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ ++ N + + Q + T+ + I K ET+++F + + N IR L+PFP A+ +
Sbjct: 179 IEMMKNNTVKATKQDHSLATFVKPIKKEETKIDFNLDSLTIFNKIRGLNPFPEAFTTL-- 236
Query: 242 GNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ +KL S +++ G KPG VI + GA+ I L+ G + D
Sbjct: 237 --NGKILKLYSSDVLDYSGDEKPGTVIDLTKEGIVVKTGDGAIVIKELKLEGKKKQSSLD 294
Query: 297 FLLGCPVIIGCIV 309
F+ G + I+
Sbjct: 295 FINGRKINKLDIL 307
>gi|226357359|ref|YP_002787099.1| methionyl-tRNA formyltransferase [Deinococcus deserti VCD115]
gi|226319349|gb|ACO47345.1| putative Methionyl-tRNA formyltransferase (Methionyl-transfer
ribonucleic transformylase)
(N(10)-formyltetrahydrofolic-methionyl-transfer
ribonucleic transformylase) [Deinococcus deserti VCD115]
Length = 320
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 101/311 (32%), Positives = 148/311 (47%), Gaps = 13/311 (4%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
RV F G+ FA+ L A+ +V V QP +P G RGLK V +A E L
Sbjct: 10 RVAFFGSPAFALPVLDAIRER-FEVVLVVAQPDKPVG-RGLKLTPPPVAARATELGLLLA 67
Query: 64 VPTKLGQE--EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ ADVAV AYG ++P +L+ + GF N H SLLPR+RGAAP
Sbjct: 68 QPGKVRGNAAFEATLRDSGADVAVTCAYGKILPASLLSVPRYGFLNTHTSLLPRYRGAAP 127
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A++AG+ TG IM+ D+ +DTGPV R++PI + L L+ A +V+A
Sbjct: 128 IQWALIAGETVTGTTIMQTDEGMDTGPVLLQRELPIEPAWTSLELADALATQAAGLIVQA 187
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ E + L + Q E T+A + K + V + A+ V N R ++ +P +
Sbjct: 188 LE--ELDTLTPTAQDEAQATHAPMLVKEDGFVRWSDPAQAVVNRFRGVAAWPQTTAFLGG 245
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
R+KL +G G+PGEV+ +A GAV+I +Q + +
Sbjct: 246 A----RLKLGGLSPTQGHGQPGEVLRADEAGLVVAAGSGAVQIETVQPEARKAQPAVVWA 301
Query: 299 LGCPVIIGCIV 309
V G
Sbjct: 302 QSAGVGAGARF 312
>gi|305680718|ref|ZP_07403525.1| methionyl-tRNA formyltransferase [Corynebacterium matruchotii ATCC
14266]
gi|305658923|gb|EFM48423.1| methionyl-tRNA formyltransferase [Corynebacterium matruchotii ATCC
14266]
Length = 306
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 101/312 (32%), Positives = 150/312 (48%), Gaps = 12/312 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E A L AL++S+H +++V T+P G RG S V + A +P
Sbjct: 1 MRIIFAGTPEPAACALTALLASNHDVIAVITRPDARKG-RGRTYYPSPVKELATSHDIPV 59
Query: 63 LVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L PT + E + D VVAYG +IPQ +LN GF N H SLLPRWRGAA
Sbjct: 60 LTPTSLRDNDEFRSELRRLKPDCVPVVAYGNLIPQDVLNLVPCGFINLHFSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG ++D LDTG + PI L + L+ A+ +
Sbjct: 120 PVQAAIHAGDAVTGATTFRIDPGLDTGDIIGQLTEPIDPADTADSLLERLAHRGANLLTR 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
MD + PQ T+A KI+ + RV++ + AE++ IRA++ PGAW +
Sbjct: 180 TMDMIADGTAEYRPQDG-VATHAHKITVADARVDWTQPAESIDRAIRAVTSSPGAWSTIG 238
Query: 241 IGNKHERIKLLES-QLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+RIKL + +PG++ + V + R+Q +G + + D+
Sbjct: 239 E----QRIKLGPVTHTTDPHMRPGDIHVAKNRILVGTGTTPVSLGRVQPSGKKPMPAADW 294
Query: 298 LLGCPVIIGCIV 309
G + G
Sbjct: 295 ARGTMIE-GKRF 305
>gi|309807730|ref|ZP_07701664.1| methionyl-tRNA formyltransferase [Lactobacillus iners LactinV
01V1-a]
gi|312874623|ref|ZP_07734647.1| methionyl-tRNA formyltransferase [Lactobacillus iners LEAF 2053A-b]
gi|325911725|ref|ZP_08174132.1| methionyl-tRNA formyltransferase [Lactobacillus iners UPII 143-D]
gi|325913023|ref|ZP_08175396.1| methionyl-tRNA formyltransferase [Lactobacillus iners UPII 60-B]
gi|329921094|ref|ZP_08277617.1| methionyl-tRNA formyltransferase [Lactobacillus iners SPIN 1401G]
gi|308168990|gb|EFO71074.1| methionyl-tRNA formyltransferase [Lactobacillus iners LactinV
01V1-a]
gi|311089853|gb|EFQ48273.1| methionyl-tRNA formyltransferase [Lactobacillus iners LEAF 2053A-b]
gi|325476491|gb|EGC79650.1| methionyl-tRNA formyltransferase [Lactobacillus iners UPII 143-D]
gi|325477703|gb|EGC80842.1| methionyl-tRNA formyltransferase [Lactobacillus iners UPII 60-B]
gi|328935001|gb|EGG31490.1| methionyl-tRNA formyltransferase [Lactobacillus iners SPIN 1401G]
Length = 314
Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats.
Identities = 95/313 (30%), Positives = 164/313 (52%), Gaps = 13/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT +F LQ L+ + I +V TQP + G R + S V K A +L
Sbjct: 4 VIFLGTPKFGAVVLQGLIDQGYKIEAVVTQPDKKFG-RKQELHQSEVKKVALANNLKIYQ 62
Query: 65 P-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P EE + LS D V AYG +P + L K+ N H SLLP++RG APIQ
Sbjct: 63 PLHLSKSEEMNELLSIRPDFIVTAAYGQFLPTKFLQTAKIKAINVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD +TG+ I++M K +D G + R + IS + + L ++LS++ ++E +
Sbjct: 123 YSLINGDKQTGVTIIEMVKKMDAGEMYGSRVIDISDDDTSGSLFEKLSIIGRDLLLEVIP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ N + + Q E+ + ++ ISK + ++ +A HN +RAL+P PGA+ I
Sbjct: 183 KIIANQIVPTGQDEDKVVFSPNISKDQEQIKTSMTATQAHNLVRALNPQPGAY----ILM 238
Query: 244 KHERIKLLESQLV--EGEGKPGEVINPN--FTIACSQGAV-RIMRLQRAGGRVLDIGDFL 298
++R K+ +S++ + + G +++ N F I+ G + +I+ +Q G + + I DF+
Sbjct: 239 HNKRYKIWQSEVSAEKCSLESGYLVSKNKEFAISFRNGTILKILNIQPTGKKPIAIKDFI 298
Query: 299 L--GCPVIIGCIV 309
G +G +
Sbjct: 299 NGQGNQFKVGEKI 311
>gi|325068810|ref|ZP_08127483.1| methionyl-tRNA formyltransferase [Actinomyces oris K20]
Length = 324
Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats.
Identities = 95/314 (30%), Positives = 151/314 (48%), Gaps = 9/314 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT E A+ TL+AL++S H +V V T+ G RG S V A++ L
Sbjct: 1 MRVLFAGTPEAALPTLEALIASEHDVVGVLTRADARKG-RGRTLHPSPVAAVARDAGLDV 59
Query: 63 LVPTK----LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
P + + + DVAVVVAYG ++P +L + G+ N H SLLP WRG
Sbjct: 60 RTPATLKGEQAGDVRDWVRALKVDVAVVVAYGRLVPADLLEVPEHGWLNLHFSLLPAWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+QRA++AGD TG + ++++ LDTGPV IS + L + L+ A +
Sbjct: 120 AAPVQRAVIAGDEVTGACVFRLEEGLDTGPVYGRLTEAISGRDTSGDLLERLAQAGAPLV 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + ++E +++ PQ + T A +S + R+ + A + IR +SP PGA
Sbjct: 180 LDVLRRIENDSVRPEPQDDALATLAPMLSSADGRIRWEDPALAIDRRIRGVSPAPGAHTT 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
G L ++ + PG++ AVR+ ++ AG +
Sbjct: 240 YQGGRFRLGPVTLVPEVTD--LLPGQLRATKHEVLAGTGGCAVRLGQVAPAGRSWMPADA 297
Query: 297 FLLGCPVIIGCIVG 310
+ G G I+G
Sbjct: 298 WARGARPEAGAILG 311
>gi|317506002|ref|ZP_07963832.1| methionyl-tRNA formyltransferase [Segniliparus rugosus ATCC
BAA-974]
gi|316255660|gb|EFV14900.1| methionyl-tRNA formyltransferase [Segniliparus rugosus ATCC
BAA-974]
Length = 310
Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats.
Identities = 96/311 (30%), Positives = 148/311 (47%), Gaps = 6/311 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF G+ E A +L ++ H +++V T+PP +G RGL S V A+E +P
Sbjct: 1 MRLVFAGSPEVAAVSLAKILDEGKHEVLAVVTRPPARSG-RGLARKPSPVGALAEERGVP 59
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L PT ++++ D A +V YG +IP +L K G+ N H SLLP WRGAA
Sbjct: 60 VLAPTSAKDPQFQEALRELAPDCAPIVGYGALIPPALLAVPKHGWVNVHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P Q AI AGD TG++ +++ LDTGPV I L L+ A +
Sbjct: 120 PAQAAIAAGDEITGVSTFLLEEGLDTGPVFGQATERIRDTDTGGALLDRLAESGAQLLAT 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +E L PQ E+G +YA KIS + RV + + V IRA++P PGAW ++
Sbjct: 180 TLAGIEAGALAPVPQAEDGASYASKISAADARVRWDLPSHVVDRRIRAMTPAPGAWT-LL 238
Query: 241 IGNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ + L ++Q E PGE+ + + + ++ G + D+
Sbjct: 239 HDKRLKLGPLAKAQEAVSELGPGELRATKSAVYVGTGSEPLVLGEVRPEGKGPMRATDWA 298
Query: 299 LGCPVIIGCIV 309
G + G
Sbjct: 299 RGARLEQGSCF 309
>gi|258404154|ref|YP_003196896.1| methionyl-tRNA formyltransferase [Desulfohalobium retbaense DSM
5692]
gi|257796381|gb|ACV67318.1| methionyl-tRNA formyltransferase [Desulfohalobium retbaense DSM
5692]
Length = 322
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 120/310 (38%), Positives = 168/310 (54%), Gaps = 11/310 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
LR+VFMGT EFA L AL + IV VYTQP RP G RG AV +KAQE +
Sbjct: 8 PLRIVFMGTPEFAAVPLSALAAWDQAEIVGVYTQPDRPCG-RGRVCRPCAVKEKAQELGI 66
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P E + S DV VV AYGL++PQ +L+ +G N HASLLP++RGA
Sbjct: 67 PVFQPQDFKSEASREELHSLKPDVLVVAAYGLILPQTVLDIAPMGAVNIHASLLPKYRGA 126
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRA++ G+ TGI IM+M+ LD+GP+ R + + N A L EL+ L + ++
Sbjct: 127 APIQRALLHGEPVTGITIMQMEAGLDSGPILLQRALGVGVNDTAADLHDELADLGSRLVI 186
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EA+ KL Q + Q + TYA K+ K E V++ R A+ VHN +RAL P+PG++
Sbjct: 187 EALAKLRQERIAPVEQDPSLATYAPKLVKTEGVVDWNRPAQEVHNQLRALYPWPGSYFIW 246
Query: 240 MIGNKHERIKL-----LESQLVEGEGKPGE---VINPNFTIACSQGAVRIMRLQRAGGRV 291
+ E I+L + + PG+ + + + +AC + R+Q AG +
Sbjct: 247 HPPDGGEPIRLTVFPGAIGREKKDTETPGQFLGIEDGHLALACVDKIYLVPRIQPAGRKA 306
Query: 292 LDIGDFLLGC 301
LD F G
Sbjct: 307 LDPKGFFCGY 316
>gi|15645755|ref|NP_207932.1| methionyl-tRNA formyltransferase [Helicobacter pylori 26695]
gi|3023781|sp|P56461|FMT_HELPY RecName: Full=Methionyl-tRNA formyltransferase
gi|2314297|gb|AAD08187.1| methionyl-tRNA formyltransferase (fmt) [Helicobacter pylori 26695]
Length = 303
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 85/310 (27%), Positives = 141/310 (45%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+R+VFMGT FA L+ALV +V ++TQ +P G R + E +
Sbjct: 1 MRIVFMGTPGFAEVILRALVGDKDIEVVGLFTQMDKPFG-RKKELKAPETKTYILENHLN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P L + E + + VVVAYG ++P+ +L N HASLLP++RGA
Sbjct: 60 IPIFQPQSLKEPEVQILKDLKPNFIVVVAYGKILPKEVLTIA--PCINLHASLLPKYRGA 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI I+ + GI+ M MD LD+G + ++ L +L+ + A ++
Sbjct: 118 SPIHEMILNDNKIYGISTMLMDVELDSGDILESASFLREDYLDLDALSLKLAHMGAALLL 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ Q ++ +KI+K + V F + + S + +
Sbjct: 178 STLKNFSSITRKS--QDHMQASFCKKITKSDGLVGFKDAKSLFLKSLAFKS---WPEIFL 232
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
G K ++L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L
Sbjct: 233 ENGLKLLEVELVENEKSHKEGEILEIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKDYLN 292
Query: 300 GCPVIIGCIV 309
G + IG I+
Sbjct: 293 GKRLKIGGIL 302
>gi|88808728|ref|ZP_01124238.1| methionyl-tRNA formyltransferase [Synechococcus sp. WH 7805]
gi|88787716|gb|EAR18873.1| methionyl-tRNA formyltransferase [Synechococcus sp. WH 7805]
Length = 342
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 111/338 (32%), Positives = 162/338 (47%), Gaps = 29/338 (8%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M L ++F GT +AV TL L + H IV V TQP R G RG + V S V +AQE
Sbjct: 1 MALNILFWGTPAYAVPTLDTLHKAGHQIVGVVTQPDRRRG-RGKQLVASPVKARAQELGC 59
Query: 61 PALVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
P P K+ ++ Q + ADV+VVVA+G ++P+ IL LG +NGH SLLPRWRG
Sbjct: 60 PVFTPEKIRRDPECQQELNALGADVSVVVAFGQILPKEILQHPPLGCWNGHGSLLPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A PIQ +I+ GD ETG+ IM M++ LDTGPV +++PI N L + LS L A M
Sbjct: 120 AGPIQWSILEGDPETGVGIMAMEEGLDTGPVFLEQRLPIGLLENAHQLGERLSRLTADLM 179
Query: 179 VEAMDKLE---------QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL 229
+EAM +E + + Q + TYA ++K + ++ + A H + L
Sbjct: 180 LEAMPAIEAAGPGPEADRWSRLNVRQQPDQGTYARMLTKDDVQLTWSDPALTTHRKVMGL 239
Query: 230 SP-----FPGAWLE-MMIGNKHERIKLLESQ--------LVEGEGKPGEVIN---PNFTI 272
P + L+ + ER+K S+ G PG+V++ +
Sbjct: 240 YPGAVTVWKDRRLKVLATEPLIERLKDALSEDARALVGRWSTGAHSPGQVLHCSGSGLVV 299
Query: 273 ACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ S + I Q G + + G +G
Sbjct: 300 STSGCPILIREAQLEGKARSSGQTLIQQLQAVPGDTMG 337
>gi|303326113|ref|ZP_07356556.1| methionyl-tRNA formyltransferase [Desulfovibrio sp. 3_1_syn3]
gi|302864029|gb|EFL86960.1| methionyl-tRNA formyltransferase [Desulfovibrio sp. 3_1_syn3]
Length = 330
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 99/310 (31%), Positives = 151/310 (48%), Gaps = 15/310 (4%)
Query: 4 RVVFMGTSEFAVATLQALVS--SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
R+VFMGT +FA L+ L +V+VYT+P +PAG RG K S V + AQE LP
Sbjct: 8 RLVFMGTPDFAAVILKELAQWPRG-EVVAVYTRPDKPAG-RGHKLTPSPVKRVAQELDLP 65
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + + DV VV AYGL++P +L A +L N HASLLPR+RGAA
Sbjct: 66 VLQPGSLKNVATQAELAALQPDVLVVAAYGLILPDAVLAAPRLAPLNVHASLLPRYRGAA 125
Query: 121 PIQRAIMAGDNETGIAIMKM--DKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
PIQRAIM + + + + + L L+ L A +
Sbjct: 126 PIQRAIMENWGPDAQSGISIMRVASRLDAGPVYADAALPIAEHTAGSLHDALARLGADLL 185
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ +D L Q E+ YA KI K + +++ R A VH HIR ++P+PGA +
Sbjct: 186 IRVLDDLLDGRAEAREQDESRAGYAAKIGKEDGFIDWNRPAAQVHAHIRGVTPWPGARVI 245
Query: 239 MMIGNKHERIKLLES-----QLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRV 291
+ E + LL + + +G +PGE+ ++AC+ R+++++ G +
Sbjct: 246 FAFAGEAEPLPLLLAPGRVGEPADG-ARPGELRHDADGLSVACADCWYRLLQVRPQGRKD 304
Query: 292 LDIGDFLLGC 301
+ + DF+ G
Sbjct: 305 MLVRDFINGR 314
>gi|123966150|ref|YP_001011231.1| putative methionyl-tRNA formyltransferase [Prochlorococcus marinus
str. MIT 9515]
gi|166215498|sp|A2BWG3|FMT_PROM5 RecName: Full=Methionyl-tRNA formyltransferase
gi|123200516|gb|ABM72124.1| putative Methionyl-tRNA formyltransferase [Prochlorococcus marinus
str. MIT 9515]
Length = 328
Score = 135 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 91/327 (27%), Positives = 155/327 (47%), Gaps = 21/327 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E++V +L+ L S H I++V TQP + RG K + S V + A + LP
Sbjct: 1 MRIIFWGTPEYSVKSLEVLKKSDHEILAVITQPDKKR-SRGNKLIASPVKQYAMKEGLPV 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L + ++ F+ D+ VV+AYG ++P++IL+ K +N HASLLPRWRGAA
Sbjct: 60 FTPETLKKNDHFISLLKEFSCDLFVVIAYGKILPKKILDIPKYKSWNAHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ +I+ GD+ TG+ IM+M++ LDTG V +++ I N L ++LS L + +++
Sbjct: 120 PIQWSILEGDDFTGVGIMRMEEGLDTGDVLVEKQIKIEKEDNLQTLTKKLSDLSSELLLK 179
Query: 181 AMDKLEQNNLPLS-----PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
A+ K+EQN Q + ++ + + + + + +P
Sbjct: 180 AISKIEQNKNKDINHLLKKQKDLQRKLKYARMINKSDYIIDWANNSTDIYRKINALYPRV 239
Query: 236 WLEMMIGNKHERIKLLES---------QLVEGEGKPGEVI----NPNFTIACSQGAVRIM 282
N + + ++V + KPG VI N I+ + ++
Sbjct: 240 STTFKKKNLKIIKIKILTTDEIQNKNYKIVSDKFKPGYVIGLIENKGIIISTKTDPILLL 299
Query: 283 RLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ G + L +IG
Sbjct: 300 EAKLEGKNISKQKQLLQQLNPLIGEKF 326
>gi|288918234|ref|ZP_06412589.1| methionyl-tRNA formyltransferase [Frankia sp. EUN1f]
gi|288350404|gb|EFC84626.1| methionyl-tRNA formyltransferase [Frankia sp. EUN1f]
Length = 337
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 97/334 (29%), Positives = 162/334 (48%), Gaps = 39/334 (11%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT + A+ +L+AL+ S H +V+V T+P RPAG RG + S VH+ A E L
Sbjct: 1 MRLVFAGTPDVAIPSLRALLDSPRHQVVAVVTRPDRPAG-RGRRVRPSPVHELAGERGLE 59
Query: 62 ALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + G E+ + D VVAYG ++P L K G+ N H SLLP +RGAA
Sbjct: 60 VLSPARAGDPEFLGRLGEIAPDCCPVVAYGALLPAPALEIPKHGWVNLHFSLLPAYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QR+++AGD+ TG ++ +++ +D+GPV + I + + L + L+V A +V
Sbjct: 120 PVQRSVLAGDDLTGASVFQIEPAMDSGPVYGVLTERIRPSDTSGDLLERLAVAGARLLVA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D +E ++ Q +G++ A K++ + RV++ + A + +RA +P PGAW +
Sbjct: 180 VLDGIEDGSVEARAQPADGVSLAPKLTVDDVRVDWSQPAVAIDRLVRAATPAPGAWTTLR 239
Query: 241 IGNKHERIKLLESQLVE-----------------------------GEGKPGEVI---NP 268
R+KL +L G PG ++ N
Sbjct: 240 DR----RVKLGPVRLGSPNTGTPNTGSPNGGSPNGGSPNGGAAGDGGSLPPGRIVMAGNG 295
Query: 269 NFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+ V + ++ G + D++ G
Sbjct: 296 AVLVGTGTVPVALGEVRPEGRGAMPAADWIRGLR 329
>gi|298529649|ref|ZP_07017052.1| methionyl-tRNA formyltransferase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511085|gb|EFI34988.1| methionyl-tRNA formyltransferase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 318
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 105/307 (34%), Positives = 158/307 (51%), Gaps = 10/307 (3%)
Query: 4 RVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
R+VFMGT EFA L+ L+ ++V VY QP RP+G RG + S V + A + LP
Sbjct: 7 RIVFMGTPEFARIVLEKLLQWPGGAVVGVYCQPDRPSG-RGRRLSFSPVKELALDRCLPV 65
Query: 63 LVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P E + L+ F D VV AYGL++P +L+ N HASLLP +RGAAP
Sbjct: 66 LQPPNFKSLEEVEKLADFRPDYLVVAAYGLILPSAVLDTASEMPINVHASLLPLYRGAAP 125
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRAI+ G + TGI+IM++ +D GPV + I L +L++L +V+
Sbjct: 126 IQRAIIEGRSRTGISIMRLTPGMDEGPVLMEESLAIEEQDTAQSLHDKLALLGGDLVVKT 185
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ L+ + PQ + TYA K++K E R+ + R A+ +H+ IR + P+PGA+ +
Sbjct: 186 LEALKHGKIDPVPQDHDQATYAAKLTKEEGRIIWDRPAKEIHDQIRGMYPWPGAYFDWTS 245
Query: 242 G-NKHERIKLLESQLV---EGEGKPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDI 294
K R+K+ ++ E PG V + + IAC R++ R +
Sbjct: 246 PSGKTIRLKVYPGRVGGDRPPEINPGTVAGLEDEHLAIACRDKMYLTDRVKPENSREMSA 305
Query: 295 GDFLLGC 301
F G
Sbjct: 306 RSFYCGF 312
>gi|58584913|ref|YP_198486.1| methionyl-tRNA formyltransferase [Wolbachia endosymbiont strain TRS
of Brugia malayi]
gi|58419229|gb|AAW71244.1| Methionyl-tRNA formyltransferase [Wolbachia endosymbiont strain TRS
of Brugia malayi]
Length = 297
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 101/298 (33%), Positives = 155/298 (52%), Gaps = 9/298 (3%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MG+ EFA+ L +L+ S + +V+VYT+ P+P+G RG K S VH A+E + PT
Sbjct: 1 MGSPEFAINALNSLLKSKNEVVAVYTKAPKPSG-RGQKLTKSPVHIIAEESGIEVCTPTS 59
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
E E+F F DVAVV AYGL++P+ ILN K N H SLLPRWRGAAPIQ I
Sbjct: 60 LKPLVEQEKFKKFKPDVAVVAAYGLILPKEILNILKYSCINIHPSLLPRWRGAAPIQHTI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+AGD +TGI+IM++D LD+GP+ +K + N N L +LS L ++ ++E +D++E
Sbjct: 120 LAGDRKTGISIMQLDGGLDSGPILKQKKFLVEKNDNYKTLHDKLSKLGSNLLMEVIDEIE 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
P ++ + ++ E + ++A P +E +
Sbjct: 180 ----KHPPLEQSDDGACYADKIEDYKIYASDICEVAYRKVKAFYPKAFVKIEHKRVRILD 235
Query: 247 RIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVI 304
+++ L G+ G++IN N I+ G + +Q G +I DF+ G
Sbjct: 236 ADFEVDASLTSGQ---GKIINDNMHISLKSGTLIPKIVQMEGRNSCNIKDFVRGLKFS 290
>gi|307637810|gb|ADN80260.1| Methionyl-tRNA formyl transferase [Helicobacter pylori 908]
gi|325996408|gb|ADZ51813.1| Methionyl-tRNA formyltransferase [Helicobacter pylori 2018]
gi|325997996|gb|ADZ50204.1| Methionyl-tRNA formyltransferase [Helicobacter pylori 2017]
Length = 305
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 140/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS---HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
+R+VFMGT FA L+ALV + +V ++TQ +P G R + E
Sbjct: 1 MRIVFMGTPGFAEVILRALVENEDKSIEVVGLFTQRDKPFG-RKKELKAPETKTYILENH 59
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
++P P L + E + D VVVAYG ++P+ +L N HASLLP++R
Sbjct: 60 LNIPIFQPQSLKEPEVQILKDLKPDFIVVVAYGKILPKEVLAIA--PCINAHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PI I+ D GI+ M MD LD+G + ++ L +L+ + A
Sbjct: 118 GASPIHEMILNDDRIYGISTMLMDLELDSGDILESASFLREYYLDLDALSLKLARMGADL 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
++ + PQ T+ +KI+K + V F + + S +
Sbjct: 178 LLSTLKNFSSITRK--PQDHMQATFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEI 232
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ K + L+E++ EG+ + + C +G+VRI +LQ G + L D+
Sbjct: 233 FLENNLKLLEVGLVENEKSHKEGEILAIDERGVLVGCLKGSVRIAQLQAVGKKPLKAKDY 292
Query: 298 LLGCPVIIGCIV 309
L G + +G I+
Sbjct: 293 LNGKRLKVGGIL 304
>gi|116490834|ref|YP_810378.1| methionyl-tRNA formyltransferase [Oenococcus oeni PSU-1]
gi|290890279|ref|ZP_06553358.1| hypothetical protein AWRIB429_0748 [Oenococcus oeni AWRIB429]
gi|116091559|gb|ABJ56713.1| methionyl-tRNA formyltransferase [Oenococcus oeni PSU-1]
gi|290480065|gb|EFD88710.1| hypothetical protein AWRIB429_0748 [Oenococcus oeni AWRIB429]
Length = 316
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 104/315 (33%), Positives = 174/315 (55%), Gaps = 14/315 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT V+F GTS+F+ A LQ L+ +++V +QP RP G R + + + A E+
Sbjct: 1 MTNSVIFFGTSDFSRAVLQGLIADDDFEVIAVVSQPDRPVG-RKKLLQPTKIKQLALEYR 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P K EE ++ +S AD V A+G +P ++L + K+ N HASLLP++RG
Sbjct: 60 IPIFQPEKLSRSEEMDRLISMQADFLVTAAFGQFVPSKLLKSAKIASINVHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPI A++ GD ETG++IM M K +D G + ++K+PI N N L ++L+V+ +
Sbjct: 120 AAPINWALINGDKETGVSIMYMVKEMDAGDIISVKKMPIKENDNAGSLFEKLAVVGRDLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRV-NFCRSAENVHNHIRALSPFPGAWL 237
++ M K+ ++ Q E IT A KI T + + + AE + + IR LSP PGA L
Sbjct: 180 LKTMPKMVSGDISPIQQDEEKITLAPKIDYKLTELDFYHQKAEKIVDLIRGLSPKPGASL 239
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEV---INPNFTIACSQG-AVRIMRLQRAGGRVLD 293
++ E+IK+ ++++ +G+ G + + I + G V + ++Q G +++D
Sbjct: 240 QIAD----EKIKVFKAKIGPCQGEVGSIAIKSKHDLAITAADGRTVFLQKIQPIGKKIMD 295
Query: 294 IGDFLLGC--PVIIG 306
+ FL G + +G
Sbjct: 296 VSSFLNGAGQKLHVG 310
>gi|312871957|ref|ZP_07732039.1| methionyl-tRNA formyltransferase [Lactobacillus iners LEAF
2062A-h1]
gi|311092534|gb|EFQ50896.1| methionyl-tRNA formyltransferase [Lactobacillus iners LEAF
2062A-h1]
Length = 314
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 95/313 (30%), Positives = 164/313 (52%), Gaps = 13/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT +F LQ L+ + I +V TQP + G R + S V K A +L
Sbjct: 4 VIFLGTPKFGAVVLQGLIDQGYKIDAVVTQPDKKFG-RKQELHQSEVKKVALANNLKIYQ 62
Query: 65 P-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P EE + LS D V AYG +P + L K+ N H SLLP++RG APIQ
Sbjct: 63 PLHLSKSEEMNELLSIRPDFIVTAAYGQFLPTKFLQTAKIKAINVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+++ GD +TG+ I++M K +D G + R + IS + + L ++LS++ ++E +
Sbjct: 123 YSLINGDKQTGVTIIEMVKKMDAGEMYGSRVIDISDDDTSGSLFEKLSIIGRDLLLEVIP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ N + + Q E+ + ++ ISK + ++ +A HN +RAL+P PGA+ I
Sbjct: 183 KIIANQIVPTGQDEDKVVFSPNISKDQEQIKTSMTATQAHNLVRALNPQPGAY----ILM 238
Query: 244 KHERIKLLESQLV--EGEGKPGEVINPN--FTIACSQGAV-RIMRLQRAGGRVLDIGDFL 298
++R K+ +S++ + + G +++ N F I+ G + +I+ +Q G + + I DF+
Sbjct: 239 HNKRYKIWQSEVSAEKCSLESGYLVSKNKEFAISFRNGTILKILNIQPTGKKPIAIKDFI 298
Query: 299 L--GCPVIIGCIV 309
G +G +
Sbjct: 299 NGQGNQFKVGEKI 311
>gi|296122973|ref|YP_003630751.1| methionyl-tRNA formyltransferase [Planctomyces limnophilus DSM
3776]
gi|296015313|gb|ADG68552.1| methionyl-tRNA formyltransferase [Planctomyces limnophilus DSM
3776]
Length = 334
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 88/327 (26%), Positives = 160/327 (48%), Gaps = 20/327 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+LR+ F+GT A +AL S H +V++ TQP R RG + + A+E ++
Sbjct: 3 SLRIAFLGTGPLARPVFEALRESPHHQVVALITQPSRTG--RGHHQHENPLIGLAEERNI 60
Query: 61 PALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P+++ E+ +L D++VV AYG ++ + IL+ +LG N HASLLP++RGA
Sbjct: 61 PVFQPSRIRDAEHATWLKELDLDLSVVAAYGQILSREILDLPRLGTINVHASLLPKYRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
PI A+++GD G+ I+++ LD GP+ + ++ + + T L+ L+ L +
Sbjct: 121 TPIHAAVLSGDEVAGVTIIRLVPKLDAGPMLGVDQLQVDAQETTGSLEARLAQLAVPLTL 180
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+D+L + Q E T+ K++K +++ + A ++ HIR + P+PG +
Sbjct: 181 RVVDQLAMGEAQETLQDETLATHVGKLTKQHGLIDWSKPAIDIERHIRGMQPWPGPQTML 240
Query: 240 MIGNK-HERIKLLESQLV-------------EGEGKPGEVINP--NFTIACSQGAVRIMR 283
K R+ +L+ ++ + PG++ + + I+
Sbjct: 241 FSEGKAPLRLSILQGTVISSSATNSSSVGSFAEQTSPGQLSSESGRLFAQTGDHRLEILT 300
Query: 284 LQRAGGRVLDIGDFLLGCPVIIGCIVG 310
LQ G R + ++L G PV G +G
Sbjct: 301 LQPEGKRAMSAAEYLRGRPVKPGDYLG 327
>gi|302341792|ref|YP_003806321.1| methionyl-tRNA formyltransferase [Desulfarculus baarsii DSM 2075]
gi|301638405|gb|ADK83727.1| methionyl-tRNA formyltransferase [Desulfarculus baarsii DSM 2075]
Length = 318
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 151/314 (48%), Gaps = 9/314 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VFMGT A +L+A+V++ H + V TQP R G RG K AV A+ L
Sbjct: 5 SLRLVFMGTPAMAAPSLEAVVAAGHRVELVITQPDRAQG-RGRKLTRGAVAAAAEALGLV 63
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ V +AYG ++P +L LG N H SLLP RGAAP
Sbjct: 64 VAQPATMAELISLTAQARP-ELVVALAYGRLLPPAVLQIPPLGALNVHFSLLPALRGAAP 122
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA++AG ++G ++M +D+ LDTG + PI + L + L+ A +V A
Sbjct: 123 IQRAVLAGLEQSGASVMFIDEGLDTGDIVLQEPTPIEAQDTAGSLAERLARQGAALLVRA 182
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
M ++ PQ ++A +++K E +++ R A + H+R + P+PGA+
Sbjct: 183 MAQIAAGQAKRRPQDHALASHAPRLTKDEGLIDWARPARQLDCHVRGMDPWPGAFCPTPA 242
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN------PNFTIACSQGAVRIMRLQRAGGRVLDIG 295
G L PG ++ T+AC QGA+ + Q G R L
Sbjct: 243 GPLRLFGPTL-VLPDNQAAPPGLILAPPAAAPNMLTVACGQGALAVGHAQAPGKRRLPAA 301
Query: 296 DFLLGCPVIIGCIV 309
+FL G + G +
Sbjct: 302 EFLRGARLAPGQFL 315
>gi|87125802|ref|ZP_01081645.1| methionyl-tRNA formyltransferase [Synechococcus sp. RS9917]
gi|86166611|gb|EAQ67875.1| methionyl-tRNA formyltransferase [Synechococcus sp. RS9917]
Length = 337
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 109/344 (31%), Positives = 168/344 (48%), Gaps = 43/344 (12%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT +AV +L+AL ++ H+IV+V TQP R G RG S V ++A + +P
Sbjct: 1 MKILFWGTPRYAVPSLEALHAAGHTIVAVVTQPDRRRG-RGKALQPSPVKERALQLGVPV 59
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ ++ Q + AD++VVVA+G ++P IL LG +NGH SLLPRWRGA
Sbjct: 60 FTPERIRRDAEMQQQLEALGADLSVVVAFGQILPPEILQQPPLGCWNGHGSLLPRWRGAG 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ ++ GD ETG+ IM M++ LDTGPV R++ I N L LSVL A MVE
Sbjct: 120 PIQWCLLEGDAETGVGIMAMEEGLDTGPVLLERRLGIGLLENAEQLAMRLSVLTAELMVE 179
Query: 181 AMDKLE----------QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
AM ++E L L PQ G+TYA +SK + ++++ SA +H + L
Sbjct: 180 AMPRIEAAGPGPESERWQRLGLRPQAAEGMTYARMLSKQDAQIDWSASALAIHRQVMGLY 239
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLV--------------------EGEGKPGEVINP-- 268
P + + +R+K+L+++ + G PG V+
Sbjct: 240 PNA------VSQWQGKRLKILQTEPLIERLSAQLSSDAREWVGRWPTGGQAPGTVLACPP 293
Query: 269 --NFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
++ S + I Q G + G +G
Sbjct: 294 GLGVVVSSSGCPLLIREAQLEGKARCGGQALMQQLQARPGDRLG 337
>gi|119952867|ref|YP_945076.1| methionyl-tRNA formyltransferase [Borrelia turicatae 91E135]
gi|254789340|sp|A1QYL4|FMT_BORT9 RecName: Full=Methionyl-tRNA formyltransferase
gi|119861638|gb|AAX17406.1| methionyl-tRNA formyltransferase [Borrelia turicatae 91E135]
Length = 309
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 80/311 (25%), Positives = 136/311 (43%), Gaps = 7/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ F + A+ L+ VS +++V V T P +P+G RGL ++ + +A ++
Sbjct: 1 MRIFFASSDSIALEVLRK-VSDHYNVVGVLTAPDKPSG-RGLFLKVNDIKVEAINRNITV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P L + D+ +V +YG + Q L+ +G N H SLLP++RG +PI
Sbjct: 59 LDPVVLNSDVIGMVKKLKPDLMLVFSYGKIFRQEFLDIFPMGCINVHPSLLPKYRGPSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD GI + KM +D+G + + I S +A + L + +V
Sbjct: 119 QTAILNGDTIGGITVQKMALEMDSGNILAQSQFEIKSFNTSADIF-RYVSLNSFNLVLEA 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
Q N TY +K +NF SA + N I A +P+P A ++
Sbjct: 178 LSKLNKGHIGIVQDSNQATYCSFFNKQHRMLNFNLSAFEIKNKINACNPWPLARAKLDKD 237
Query: 243 NKHERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ G++++ + G + ++ LQR+G +V+D F
Sbjct: 238 EIIFHRADFIKTTDYSDQAIGKIVSFDPSKGILVKTEDGILLLLELQRSGRKVVDYKSFY 297
Query: 299 LGCPVIIGCIV 309
G +IG I
Sbjct: 298 NGNRDLIGKIF 308
>gi|320537112|ref|ZP_08037085.1| methionyl-tRNA formyltransferase [Treponema phagedenis F0421]
gi|320146037|gb|EFW37680.1| methionyl-tRNA formyltransferase [Treponema phagedenis F0421]
Length = 322
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 86/311 (27%), Positives = 142/311 (45%), Gaps = 14/311 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ----EF 58
L+++F GT E AV L A ++ H IV + T+PP G R K + SA+ + E
Sbjct: 2 LKILFAGTPECAVPVLHA-IAQKHHIVGILTRPPAAVG-RSKKLIPSAIALATEVLKSEK 59
Query: 59 SL----PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
+ P P KL ++ E + + DV V AYG + Q +L+ LG N H SLLP
Sbjct: 60 RISPAAPLFTPQKLNKDVREAIAAVSPDVMVCFAYGKIFGQSMLDLFPLGAINIHPSLLP 119
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
RWRG+ P+ AI+ GD +TG+ + +M +D G + +P+ + L +
Sbjct: 120 RWRGSTPVPAAILTGDTKTGVTVQQMALEMDAGDILAQCTIPLDGSETAESLLNLCAQRS 179
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
A + + K+ L PQ + T+ ++K +N+ SAE + RA P+PG
Sbjct: 180 ADLTLSVLQKITDKTLSPMPQDHSAATFCGMLTKEMGLINWHNSAEEIDRRHRAFVPWPG 239
Query: 235 AWLEMMIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGR 290
+ + + + +PG ++ + +G + +++LQR G +
Sbjct: 240 TFTYKNNEKLSIQALAIATSENTQNAEPGTILTADKKNGILVQTGKGIISLIQLQRTGKK 299
Query: 291 VLDIGDFLLGC 301
L DFL G
Sbjct: 300 SLYWKDFLNGS 310
>gi|220919193|ref|YP_002494497.1| methionyl-tRNA formyltransferase [Anaeromyxobacter dehalogenans
2CP-1]
gi|254789332|sp|B8J9P3|FMT_ANAD2 RecName: Full=Methionyl-tRNA formyltransferase
gi|219957047|gb|ACL67431.1| methionyl-tRNA formyltransferase [Anaeromyxobacter dehalogenans
2CP-1]
Length = 312
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 103/305 (33%), Positives = 147/305 (48%), Gaps = 6/305 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ F+GT FAVA L AL + H++V+V QP RPAG RG A A+ +P
Sbjct: 1 MRIAFLGTPAFAVAALDALERAGHALVTVVAQPDRPAG-RGQALREPATKAWARARGVPV 59
Query: 63 LVPTKLGQ-EEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K+ + D VV AYG ++ + +L G N H SLLPRWRGAAP
Sbjct: 60 LQPEKVRDGTLAAALRALAPDALVVAAYGRILGKDLLTLAPHGALNVHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A+ G+ ETG+ IM+MD+ LDTG V R + I + + L L+ L A+VEA
Sbjct: 120 IQWAVAEGERETGVTIMQMDEGLDTGDVLLQRALEIGEDDTSETLAPRLAALGGEALVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE L Q T A + K + R+ + R A + + +R +P+PGA+ +
Sbjct: 180 LRLLEAGALVPVRQDAAQATLARILEKEDGRIAWTRPARRISDRLRGFTPWPGAFTTLEG 239
Query: 242 GNKHERIKLLESQLVEGEGKPGE---VINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDF 297
+ + G+PGE V +AC G A+ + R+Q G D
Sbjct: 240 RTLKVLEARPGADVATPAGEPGEAEVVPGRGLAVACGGGSALLVTRVQLEGRPAQSALDL 299
Query: 298 LLGCP 302
G
Sbjct: 300 ANGLR 304
>gi|222823227|ref|YP_002574800.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Campylobacter lari RM2100]
gi|254789344|sp|B9KER4|FMT_CAMLR RecName: Full=Methionyl-tRNA formyltransferase
gi|222538448|gb|ACM63549.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Campylobacter lari RM2100]
Length = 303
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 78/311 (25%), Positives = 140/311 (45%), Gaps = 11/311 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS- 59
M ++FMGT +A L+ L+ ++ +++TQ +P G R S K E +
Sbjct: 1 MK-NIIFMGTPSYATCILKELIDKGFNVQALFTQSDKPVG-RKQILTPSDTKKFVLENNL 58
Query: 60 -LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ P L E + +VVA I + + N HASLLP++RG
Sbjct: 59 NIEIFTPKSLKDENIINEIKILKPDFIVVAAYGKILPKEILDIA-PCINLHASLLPKYRG 117
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+PIQ AI+ GD +G+ M M++ LD+G + + I + ++ +
Sbjct: 118 ASPIQSAILNGDKISGVCTMLMEEGLDSGAILESTECDIEGKNSAEVFIMFSNLAAKLTI 177
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + Q E+ + + K K E + +A ++ A P+PG + E
Sbjct: 178 STLLNFEKIIPK---KQDESLVIH-CKKIKKEDGLITLDNASEIYQKFLAFYPWPGIFFE 233
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
G K I+L++S+ + G +V +F ++C +G ++I LQ +G +VLD +L
Sbjct: 234 --NGMKFLDIELIDSEKTQKSGVILQVEKESFLLSCKKGILKIKTLQESGKKVLDAKTYL 291
Query: 299 LGCPVIIGCIV 309
G + +G +
Sbjct: 292 NGKRLKLGDSL 302
>gi|258539842|ref|YP_003174341.1| methionyl-tRNA formyltransferase [Lactobacillus rhamnosus Lc 705]
gi|257151518|emb|CAR90490.1| Methionyl-tRNA formyltransferase [Lactobacillus rhamnosus Lc 705]
Length = 318
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 96/313 (30%), Positives = 151/313 (48%), Gaps = 14/313 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT +FAV L+ L++ + +V+V TQP R G R K S V + A ++P L
Sbjct: 4 VIFLGTPDFAVPILEGLIAQHYDVVAVMTQPDRKVG-RKQKLAASPVKQAAVAHNIPVLQ 62
Query: 65 PTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K G E Q ++ D+ V AYG +P + L A K+ N H SLLP++RG APIQ
Sbjct: 63 PEKLSGSPELAQAIALAPDLIVTAAYGQFLPTKFLQAAKIAAVNVHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+I+ GD ETG+ I++M K +D G + K+P++ +T + +LS+L ++ +
Sbjct: 123 YSIINGDAETGVTIIEMVKKMDAGDMFAQAKLPLTRQDDTGTVFAKLSLLGRDLLLATLP 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
K+ +PQ +T+A I+K + ++ SA + +R L P G ++ M
Sbjct: 183 KIIDQTAIRTPQDPEKVTFAPTITKEQEHLDIHLSARALDQWVRGLRPEVGGYVYM---- 238
Query: 244 KHERIKLLESQL--VEGEGKPGEVI---NPNFTIACSQ-GAVRIMRLQRAGGRVLDIGDF 297
+R KL G V+ IA + I L AG I D+
Sbjct: 239 NGQRTKLWAITPLTATTNLPAGSVVARSKHQLVIAAGKPSTFHIDELPPAGKSQQHIADY 298
Query: 298 LL--GCPVIIGCI 308
L G + +G
Sbjct: 299 LNGPGRHLTVGQQ 311
>gi|242310673|ref|ZP_04809828.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Helicobacter pullorum MIT 98-5489]
gi|239523071|gb|EEQ62937.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Helicobacter pullorum MIT 98-5489]
Length = 300
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 69/307 (22%), Positives = 125/307 (40%), Gaps = 8/307 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT +A L++L+ S H+I ++ QP + AG R ++ + A + + L
Sbjct: 1 MNIVFMGTPSYAAVILESLLKS-HTIKALVCQPDKRAG-RDMQLKMPATKELLLKSGLEV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + L ++V N H S+LP++RGA+PI
Sbjct: 59 PILQPQALDLDFVDLLKQIQFDIIVVAAFGKILPKEILNLAPCVNLHTSILPKYRGASPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q +I+A + G+ +MKM++ LD+G + MR + + + + +
Sbjct: 119 QESILANEKFFGVTLMKMEEGLDSGDILGMRIIKNHQQNSKELFSELSNAAAILTLQYLE 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + Q K K E + AEN++ A +P + + G
Sbjct: 179 KRDLIVPM----QQIGADATYCKKIKKEMGIVDFGDAENLYRKALAYEGWPEIF--LKNG 232
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
K + + L E Q G+ E+ + C QG+V I LQ + + +L G
Sbjct: 233 LKIKEVVLNEIQSCNLAGEILEITEDKILVGCLQGSVWIGTLQAPSKKAMSAYQYLQGRR 292
Query: 303 VIIGCIV 309
+ G I+
Sbjct: 293 LRKGDIL 299
>gi|88607450|ref|YP_505533.1| methionyl-tRNA formyltransferase [Anaplasma phagocytophilum HZ]
gi|123763798|sp|Q2GJB8|FMT_ANAPZ RecName: Full=Methionyl-tRNA formyltransferase
gi|88598513|gb|ABD43983.1| methionyl-tRNA formyltransferase [Anaplasma phagocytophilum HZ]
Length = 301
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 96/310 (30%), Positives = 158/310 (50%), Gaps = 18/310 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++VVFMG+SEF++ +ALVS+ + +V+VYT+ P+PAG RG + VH A+ +P
Sbjct: 1 MKVVFMGSSEFSLPAFEALVSADSYDVVAVYTKAPKPAG-RGYALTKTPVHICAEGKGIP 59
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E + DV VVV+YGL++P+ L A+++G N H SLLPRWRGAA
Sbjct: 60 VRSPVSLRAEGEESIMAEYAPDVIVVVSYGLMLPKWTLTASRMGCVNIHPSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI++GD TG+ IM++++ +D G + I N L + LSV+ + +++
Sbjct: 120 PMQHAILSGDTVTGVTIMQINEFMDAGDIYLQEVTEIGEKENILDLSRRLSVMGSRMLLK 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D ++ Q E+G+T A K+ + + +M
Sbjct: 180 VLD--SIGSIQPIKQDESGVTIANKLEEFRIDFEEAADVICRRIRA--------LYPKMY 229
Query: 241 IGNKHERIKLLESQLVE-GEGKPGEVINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFL 298
R+++LE++ E E G+VIN I C A+ + +Q+ + DI FL
Sbjct: 230 FMLDGSRVRVLEAESYEFAEMNIGDVINNELHIRCGGNTALVPLVVQQESKKPCDIKSFL 289
Query: 299 ---LGCPVII 305
G + +
Sbjct: 290 CRFRGKSMPV 299
>gi|289523050|ref|ZP_06439904.1| methionyl-tRNA formyltransferase [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289503593|gb|EFD24757.1| methionyl-tRNA formyltransferase [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 310
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 90/311 (28%), Positives = 156/311 (50%), Gaps = 13/311 (4%)
Query: 7 FMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
+MG+ + L+ L S++ V T PRP+G RGL+ + V + A +
Sbjct: 3 YMGSGSWGAQCLRELARLSYNPELVITSGPRPSG-RGLRRKPNDVEEMAYWLDIEVRRSE 61
Query: 67 KLGQEEYEQFLSF--NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
+ + + + ++ VV+ +G I + L+ K G N H SLLP++RGAAPIQR
Sbjct: 62 NINDDVIIKEKLMLNSPELIVVIDFGQKIKEPFLSTPKFGCINLHPSLLPKYRGAAPIQR 121
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
AIM G TG+ + ++ + LD GP+ KV I + L ++L ++ +D
Sbjct: 122 AIMDGQQITGVTVFRLTESLDAGPILAQDKVYIDLDDTAGTLGEKLRCRGIELLINTLDA 181
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
L + Q E+ TYA KI+ E +F A +HN +RAL+P PGA+ +
Sbjct: 182 LPKGIYEFREQDESEATYAPKITNEEALFDFNEEALKIHNKVRALNPEPGAYTLI----N 237
Query: 245 HERIKLLESQLVEGE------GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+R+K+ ++L+ + G ++++ +AC +GAV ++ +QR G +V++ FL
Sbjct: 238 DKRLKVWRTKLINNDEVFAPVGTIFKIVDGFPVVACGKGAVLLLEVQREGKKVVNGRSFL 297
Query: 299 LGCPVIIGCIV 309
G + G ++
Sbjct: 298 NGLRLREGDVL 308
>gi|149200574|ref|ZP_01877582.1| methionyl-tRNA formyltransferase [Lentisphaera araneosa HTCC2155]
gi|149136346|gb|EDM24791.1| methionyl-tRNA formyltransferase [Lentisphaera araneosa HTCC2155]
Length = 324
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 159/322 (49%), Gaps = 25/322 (7%)
Query: 4 RVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+V FMG+ + + AL S ++ V +QP RPAG R + S + A+
Sbjct: 7 KVFFMGSGAIGIPAVAALHESSEIELLGVASQPDRPAG-RKKRLTPSPLAAWAESEGFSV 65
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ +++ +++ D+ VV+AYG ++ + +L+ G N HAS+LP +RGA+P
Sbjct: 66 HKPEKVSSQDFVDYVASLKPDIVVVIAYGQLLRENLLHLAPYGCLNVHASILPYYRGASP 125
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I ++ G+ E+G+++M+M K +DTG V KV + N T L+ +L+ + A +V
Sbjct: 126 IFSVVLNGEKESGVSMMQMAKGMDTGAVYRTHKVNLEENETTGSLELKLANIAAQQLVND 185
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + N L + Q T KI K +++ + AE+ I A P+PG W +
Sbjct: 186 IQDVVHNGLEATEQNHEEATSCSKIGKSFGLIDWSQPAESNIRKIFACQPWPGTWTYYQV 245
Query: 242 GNKHERIKLLESQLVEGEG---KPGEVINPNFTIACSQGA-----------VRIMRLQRA 287
G+K +R+ + E+ + E PGE++ G+ + + R++
Sbjct: 246 GDKFKRLAICEASVCESSSLERSPGEIV--------LDGSSLKVASSSSDLLEVRRVKPE 297
Query: 288 GGRVLDIGDFLLGCPVIIGCIV 309
G R +D+ DFLLG + G +
Sbjct: 298 GKREMDVKDFLLGAGLKNGDNL 319
>gi|256827224|ref|YP_003151183.1| methionyl-tRNA formyltransferase [Cryptobacterium curtum DSM 15641]
gi|256583367|gb|ACU94501.1| methionyl-tRNA formyltransferase [Cryptobacterium curtum DSM 15641]
Length = 317
Score = 133 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 101/315 (32%), Positives = 154/315 (48%), Gaps = 14/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT ++A L L+ + H +V V+T+P G RG + S V + A +P
Sbjct: 1 MRIVFMGTPKYAATILDNLI-AHHEVVGVFTRPDAVRG-RGRELQPSPVRELADRAGIPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
PT Y+ S +V V AYG ++P RIL+ + G N HASLLP WRGAAP
Sbjct: 59 FTPTTLRDNAIYDVIASLQPEVICVAAYGAILPPRILSLPRYGCLNVHASLLPHWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I+RAI+A D ETG+ +M+M++ LDTG + + + T L EL+ L + A++ A
Sbjct: 119 IERAILADDEETGVCVMRMEEGLDTGDYC-VVRTTQINGKGTVELTAELADLGSQALLTA 177
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L + ++ + Q + TYA+KI KGE + ++A SP A +
Sbjct: 178 LTLLAEGHIEWTAQDDFFSTYADKIGKGELNLIPADEVRRATRKVQASSPAHPARCLIAS 237
Query: 242 GNK------HERIKLLESQLVEGEGKPGEVI-NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
E +LL ++ EG V+ + S GA+ I ++ G R +
Sbjct: 238 RPCTVVRAHREPSRLLRERMRISEGH--TVLFQKKLYLGFSDGALEIDEVRPDGKRTMTG 295
Query: 295 GDFLLGCP-VIIGCI 308
DF G + G I
Sbjct: 296 RDFAAGIQNIKSGVI 310
>gi|183221044|ref|YP_001839040.1| methionyl-tRNA formyltransferase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911138|ref|YP_001962693.1| methionyl-tRNA formyltransferase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775814|gb|ABZ94115.1| Methionyl-tRNA formyltransferase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779466|gb|ABZ97764.1| Methionyl-tRNA formyltransferase [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 322
Score = 133 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 85/326 (26%), Positives = 151/326 (46%), Gaps = 22/326 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M L + + G+ E + LQ ++ + + V T +P G R + V + A+E +
Sbjct: 1 MKLSIGYFGSPEHSKELLQMILDAGIQVDFVVTNVDKPVG-RKQIITPTPVKQLAEEKGI 59
Query: 61 PALVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
P + +L ++ +Q LSF + V VV AYG ++P+ + K G N H SLLP++RG
Sbjct: 60 PVIQSVRLRTDDAAQKQILSFRSPVHVVYAYGSIVPETVFMDPKWGSINLHGSLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+P+Q ++ G+ TG I + K +D+G + + +S T L + ++ +
Sbjct: 120 ASPVQTVLLTGEKTTGFTIQYLAKEVDSGDIISQKSWTVSLEETTGSLLKTITKEGGVEL 179
Query: 179 VEAMDKLEQN--NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+ + LE +PQ T+ +KI+ +++ RSA+ +HN IRAL+P P A
Sbjct: 180 IRLLQTLESTGEGWKSTPQKSEEATHCQKITANHRPIDWSRSAKEIHNQIRALNPDPLAT 239
Query: 237 LEMMIGNKHERIKLLESQLVEGEGKPGEV------------INPNFTIACSQGAVR-IMR 283
E + +++ L+ S L E + +P ++ C G + I
Sbjct: 240 TEF----RGKKLILVSSFLPETQTEPIQIPIEAKTGSFFLYQKKRLFCLCGDGNLLGIDT 295
Query: 284 LQRAGGRVLDIGDFLLGCPVIIGCIV 309
LQ G + + +F G V+ G
Sbjct: 296 LQPEGKKPMKGFEFFNGARVLTGESF 321
>gi|62184735|ref|YP_219520.1| methionyl-tRNA formyltransferase [Chlamydophila abortus S26/3]
gi|73919386|sp|Q5L722|FMT_CHLAB RecName: Full=Methionyl-tRNA formyltransferase
gi|62147802|emb|CAH63548.1| putative methionyl-tRNA formyltransferase [Chlamydophila abortus
S26/3]
Length = 321
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 97/309 (31%), Positives = 167/309 (54%), Gaps = 9/309 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+L++V+ GT +FA L L+ ++V+V T+ +P +R + + S V A ++
Sbjct: 1 MSLKIVYFGTPQFAATVLADLLHHEVNVVAVVTRVDKPQ-KRSSQLIPSPVKTLALSKNI 59
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P K+ ++ + F ADV +VVAYG ++ Q +L+ K G YN HA LLP +RGA
Sbjct: 60 PLLQPEKVSDPQFVEQLRDFEADVFIVVAYGAILKQMVLDIPKYGCYNLHAGLLPAYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQR IM G ++G +++MD +DTG +A + VP+ ++ L + L+ ++
Sbjct: 120 APIQRCIMDGVVQSGNTVIRMDAGMDTGDIANVSFVPVGPDMTAGELAEALASQGGEILI 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ + +PQ + + A K+SK E + + AE V+ IR ++P PGAW
Sbjct: 180 KTLQQISDGTITHTPQEASKASIAPKLSKEEGFILWDHPAEKVYAQIRGVTPAPGAWTLY 239
Query: 240 MIGNKH-ERIKLLESQLVEGE---GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
K R+ + ++ L + G PG+++ +AC++GA+ + +Q G V+
Sbjct: 240 SYQGKPARRLVIRKASLSSSQGVYGHPGDILLSDQQELLVACAEGAICLKEIQPEGKGVM 299
Query: 293 DIGDFLLGC 301
D FL G
Sbjct: 300 DSKSFLNGH 308
>gi|152993363|ref|YP_001359084.1| methionyl-tRNA formyltransferase [Sulfurovum sp. NBC37-1]
gi|259646051|sp|A6QB68|FMT_SULNB RecName: Full=Methionyl-tRNA formyltransferase
gi|151425224|dbj|BAF72727.1| methionyl-tRNA formyltransferase [Sulfurovum sp. NBC37-1]
Length = 304
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 79/308 (25%), Positives = 140/308 (45%), Gaps = 8/308 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M ++++MGT +A LQ LV + + V TQP RP G R V AQE
Sbjct: 1 MKYKIIYMGTPHYAREILQTLVEAEDMDVSLVLTQPDRPVG-RKKVLTPPPVKVLAQEHG 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ L P +L +E ++ + ++VA I + + N HASLLP++RGA
Sbjct: 60 IDVLQPNRLSEEGIKEAIKSQNPDFIIVAAFGQILPQSILDIA-PCINLHASLLPQYRGA 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+P+Q++++ GD +TG+ M M+ LDTGP+ + I + L ++L+ +
Sbjct: 119 SPVQQSLLNGDEKTGVTSMLMEAGLDTGPMLEKIEFVIPKEMRLFALMEQLTRDACMLTL 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ E Q E+ + +KI K + +++F + + + +
Sbjct: 179 STVRNFETI--TPEAQDESQASLCKKIKKSDGQIDFEDAEIIYNKYRAF---EGWPGIFA 233
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ G K + + LLES G+ + + CS+GA++I LQ A +V+ + +
Sbjct: 234 VNGTKFDEVILLESGTTHTAGEILSFDEESVLVGCSRGALKIGILQPASKKVMTARAYCV 293
Query: 300 GCPVIIGC 307
G +G
Sbjct: 294 GRGKKVGD 301
>gi|168038970|ref|XP_001771972.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676754|gb|EDQ63233.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 373
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 92/321 (28%), Positives = 148/321 (46%), Gaps = 24/321 (7%)
Query: 4 RVVFMGTSEFAVATLQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
+VVF+GT A L AL+ SS + ++ TQPP G RG K + S V +A E
Sbjct: 41 KVVFLGTPSVAAGVLDALLDSSRADDSLFEVAAIVTQPPAARG-RGRKQLPSPVAARALE 99
Query: 58 FSLPALVPTKLGQEEYEQFLSF----NADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
PA + + E FL D+ V AYG +P + L G N H SLL
Sbjct: 100 REFPASLIWSPEKASEEGFLKDLVALRPDLCVTAAYGNYLPSKFLAIPTCGTVNVHPSLL 159
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
P +RGAAP+QRA+ G + TG+ + + +D GP+ +V + NI L L
Sbjct: 160 PLYRGAAPVQRALYDGVDVTGVTVAYTVRAMDAGPIIASERVNVDPNIKAPELLSYLFGR 219
Query: 174 CAHAMVEAMDKLEQNNLPLS--PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
++ + + + L+ PQ ++ T+A K++ E+ ++F +A HN +RA +
Sbjct: 220 GTELLLRELPAILDGSAKLNATPQDDSLATHAAKVTVEESWLSFQETAVTCHNKVRAFAE 279
Query: 232 FPGAWLEMMIGNKHERIKLLESQLV---------EGEGKPGEVINPNFTIACSQGA-VRI 281
+PGA + + +IK LE +++ +G ++I + C + I
Sbjct: 280 WPGAKCKFQTRSSDGQIKTLELKIITTRVGGSVENSDGLV-KLIGDALVVPCGDNTTLEI 338
Query: 282 MRLQRAGGRVLDIGDFLLGCP 302
+ LQ G +V+ DF G
Sbjct: 339 LELQPPGKKVMRAKDFCNGLR 359
>gi|218282264|ref|ZP_03488563.1| hypothetical protein EUBIFOR_01145 [Eubacterium biforme DSM 3989]
gi|218216732|gb|EEC90270.1| hypothetical protein EUBIFOR_01145 [Eubacterium biforme DSM 3989]
Length = 309
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 85/300 (28%), Positives = 154/300 (51%), Gaps = 9/300 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R++FMGT + A L+ ++ + + V TQP + G R + V S V + A E+ +P
Sbjct: 5 RIIFMGTPKIASVVLKTMLENDIHVGLVVTQPDKKKG-RKQQLVYSEVKEVALEYDIPVF 63
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P K+ +Y+ L F D+ V AYG ++P+ +L+ + G N H SLLP++RG APIQ
Sbjct: 64 QPVKIKS-DYQTILDFAPDLIVTCAYGQIVPKEVLDLPRYGCVNLHGSLLPKYRGGAPIQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
RAI GD +G+++MKM +D GPV +++ I N+ L ++ + + ++ +
Sbjct: 123 RAIWNGDKVSGMSLMKMAPKMDAGPVLAQKEIEILPTDNSTTLFDKMGICASELLLSHFE 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
++ + Q E+ + ++ +SK E ++ + E++ N IRA + PGA++ +
Sbjct: 183 EICSGHAVYVEQDESQVVFSPVLSKEEEHIDLNQDDEHILNQIRAFANAPGAYVLLKG-- 240
Query: 244 KHERIKLLESQLVEGEGKPG---EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
++ K+L++ + + G ++ I G + I Q G V+D F G
Sbjct: 241 --KKFKILKASYLNEHNEFGLLVKIGKNKLGIGLHLGTLVIETCQMEGKPVMDCASFFNG 298
>gi|172040658|ref|YP_001800372.1| hypothetical protein cur_0978 [Corynebacterium urealyticum DSM
7109]
gi|229487491|sp|B1VDP0|FMT_CORU7 RecName: Full=Methionyl-tRNA formyltransferase
gi|171851962|emb|CAQ04938.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 329
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 87/313 (27%), Positives = 142/313 (45%), Gaps = 14/313 (4%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++F GT + A L+ L+ ++ V TQP G RG S V + A+ L
Sbjct: 1 MKILFAGTPKPAAIVLEHLLTDPRLEVLGVITQPDARRG-RGRSLHPSPVAEVAEGAGLK 59
Query: 62 ALVPTK---------LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
+E + A VVAYG +IP +L+A + G+ N H SL
Sbjct: 60 VHKWHSLGASSEDAAAVRETLAAYREAGATAVAVVAYGNLIPADLLDAVEHGWVNLHYSL 119
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAP+Q AI AGD ETG I ++++ LDTGP+ + I + EL+
Sbjct: 120 LPRWRGAAPVQAAIAAGDQETGATIFRIEQGLDTGPMLSKKAYEIGIRETAEEVLIELTN 179
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ + + +L + + PQ E G T+A K+ + R++F A+ + RA +P
Sbjct: 180 SGKSLLADTLVELGEGSATPQPQPEEGATHAPKLHPADARIDFSAPAKVIQRRARAHTPA 239
Query: 233 PGAWLEMMIGNKHERIKLLESQLVE-GEGKPGEV--INPNFTIACSQGAVRIMRLQRAGG 289
PGAW + + L ++ E E PG++ + + + +Q G
Sbjct: 240 PGAWCTLDGQRYKFGLMLPVAEGEEFPELAPGQLWADKTRVLVGTGDTPLLVETIQPPGK 299
Query: 290 RVLDIGDFLLGCP 302
+++ D+ G
Sbjct: 300 KMMRAADWARGQQ 312
>gi|223889078|ref|ZP_03623667.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi 64b]
gi|223885327|gb|EEF56428.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi 64b]
Length = 312
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 83/312 (26%), Positives = 147/312 (47%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ F+ +S A+ + +V + +V V T P RP G RG K + + +A ++
Sbjct: 1 MKIFFVSSSSIALEVFKEIVK-HYEVVGVLTLPDRPKG-RGQKLSQNVIKSEAIARNIKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P L N D+ +V +YG + + L+ G N H SLLP++RG +PI
Sbjct: 59 LDPLILDDNVLNLVRDLNPDLMLVFSYGKIFKKEFLDLFPKGCINVHPSLLPKYRGVSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD +G+ I M +D+G + + I S + + + +S L ++EA+
Sbjct: 119 QSAILNGDCVSGVTIQSMALEMDSGNILVQKNFKIRSYDTSHDISKLVSSLSPSLVLEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+K+ + L PQ + T+ K ++F SA + N I A +P+P + +
Sbjct: 179 EKISKGFL-GIPQKSSEATFCSFFKKESGFIDFNLSAFEIKNKINACNPWPLVRVRLDYN 237
Query: 243 NK-HERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R LE L + K GE+++ + +G + ++ +QR G +VLD F
Sbjct: 238 DIIFHRADFLEVDLYKER-KIGEIVDFNPEKGLFVNTGKGILLLLEVQRPGRKVLDFKSF 296
Query: 298 LLGCPVIIGCIV 309
G +IG +
Sbjct: 297 YNGSRQLIGQVF 308
>gi|328955667|ref|YP_004373000.1| methionyl-tRNA formyltransferase [Coriobacterium glomerans PW2]
gi|328455991|gb|AEB07185.1| methionyl-tRNA formyltransferase [Coriobacterium glomerans PW2]
Length = 306
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 99/307 (32%), Positives = 149/307 (48%), Gaps = 8/307 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT F+V L+AL ++ H + T+P RG + SAV A + +P
Sbjct: 1 MRVVFMGTPSFSVPPLRALAAA-HDVCLAVTRPDAVR-ARGKRLEPSAVKAAAVDLGIPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L ++ + E + AD+ VVA+G ++P +L + LG N HASLLPRWRGAAPI
Sbjct: 59 LEARRMDSDVIEALRATEADIFCVVAFGSILPDEVLRMSPLGCVNVHASLLPRWRGAAPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QR I+AGD+ TG +IM++ +DTG V S+ L +LS L A +V +
Sbjct: 119 QRCILAGDSCTGASIMRISSGVDTGDVCAQASC-AVSSKGADELSSDLSELGASLLVRTL 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
L ++ SPQ E T A KI KGE ++ SAE +RA S A ++
Sbjct: 178 PALRSGDVVWSPQDETRATLAPKIEKGELWLDPKSSAEMNARRVRASSDAAPARCVIVDR 237
Query: 243 NKHERIKLL--ESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ + + G G + C+ G+++++ L+ G R + + G
Sbjct: 238 PVRVTRAVAVRSAHVAAGCLAVG---KERVLLGCADGSLQVLSLKPDGRREMGADAWASG 294
Query: 301 CPVIIGC 307
V G
Sbjct: 295 VRVRTGT 301
>gi|331697236|ref|YP_004333475.1| methionyl-tRNA formyltransferase [Pseudonocardia dioxanivorans
CB1190]
gi|326951925|gb|AEA25622.1| Methionyl-tRNA formyltransferase [Pseudonocardia dioxanivorans
CB1190]
Length = 310
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 94/314 (29%), Positives = 149/314 (47%), Gaps = 12/314 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R++F GT E AV L+AL+ S H +V+V T+P PAG RG S V A E +
Sbjct: 1 MRLLFAGTPEPAVPALRALLESPRHEVVAVLTRPDAPAG-RGRSVQRSPVGALADEAGVR 59
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + + E+ D A VVAYG ++P+ L+ G+ N H SLLP WRGAA
Sbjct: 60 VLTPRRPSEPEFLATLTELAPDCAPVVAYGALVPRAALDVPVHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI GD+ TG ++++ LDTGP + + + L L+V A +V
Sbjct: 120 PVQAAIRHGDDVTGATTFRLEEGLDTGPTYGVVTETVGAEDTAGALLGRLAVSGARLLVA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + + PQ+ G++ A K+ + RV + A V +R+++P PGAW
Sbjct: 180 TLDGIADGTVTAVPQLTEGVSLAPKVLVADARVAWDAPAVAVDRLVRSVTPEPGAWTHFR 239
Query: 241 IGNKHERIKLLESQLVEGEG---KPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+R+ L + V G PG V + + V + ++ G + +
Sbjct: 240 D----QRLGLGPVRPVRTGGIALAPGALHVEKRRVLVGTATVPVELGEVRPTGKKAMPAP 295
Query: 296 DFLLGCPVIIGCIV 309
D+ G + ++
Sbjct: 296 DWARGVRIAEEEVL 309
>gi|212695670|ref|ZP_03303798.1| hypothetical protein ANHYDRO_00187 [Anaerococcus hydrogenalis DSM
7454]
gi|212677343|gb|EEB36950.1| hypothetical protein ANHYDRO_00187 [Anaerococcus hydrogenalis DSM
7454]
Length = 319
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 78/315 (24%), Positives = 148/315 (46%), Gaps = 13/315 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+ + FMG+ +F++ TL L + + ++ V + + R K + + + A + +L
Sbjct: 10 KINICFMGSPKFSLETLDILNKNENINVSLVVSGKDKKRNR--NKFKPTVIKQYALDNNL 67
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P + +E+ D VVVA+G +I + +L K N H S LP++RG
Sbjct: 68 EVLTPDSVNTDEFINILREKEIDFIVVVAFGQLIKENLLKEFKNKIINLHPSSLPKYRGP 127
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+P+Q ++ GD T + M ++K +D+G + + +++ I + L ++LS + + A++
Sbjct: 128 SPVQFTLLNGDKTTHASAMLIEKGMDSGDILYQKELEIQDEDDFTSLSEKLSKIGSQAIL 187
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
++ Q + T+ +KISK +++F E++ N IRA FP A+
Sbjct: 188 YSLLNYNDLIEKSIKQDDENATFTKKISKDMGKIDFSNDKEDIINKIRAFVEFPKAYFTY 247
Query: 240 MIGNKHERIKLLESQLVE-GEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDI 294
N +K+L++ V+ K V I C G ++I ++Q G + +D
Sbjct: 248 KGEN----VKILKASPVQIENPKISFVYKANKEDKIIIGCKNGGIKIEKIQFPGKKAMDT 303
Query: 295 GDFLLGCPVIIGCIV 309
FLLG G +
Sbjct: 304 KSFLLGNDFEEGIYL 318
>gi|226320764|ref|ZP_03796320.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi 29805]
gi|226233819|gb|EEH32544.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi 29805]
Length = 312
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 82/312 (26%), Positives = 147/312 (47%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ F+ +S A+ + +V + +V V T P +P G RG K + + +A ++
Sbjct: 1 MKIFFVSSSSIALEVFKEIVK-HYEVVGVLTLPDKPKG-RGQKLSQNVIKSEAIARNIKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P L N D+ +V +YG + + L+ G N H SLLP++RG +PI
Sbjct: 59 LDPLILDDNVLNLVRDLNPDLMLVFSYGKIFKKEFLDLFPKGCINVHPSLLPKYRGVSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD +G+ I M +D+G + + I S + + + +S L ++EA+
Sbjct: 119 QSAILNGDCVSGVTIQSMALEMDSGNILVQKNFKIRSYDTSHDISKLVSSLSPSLVLEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+K+ + L PQ + T+ + K ++F SA + N I A +P+P + +
Sbjct: 179 EKISKGFL-GIPQKSSEATFCSFLKKESGFIDFNLSAFEIKNKINACNPWPLVRVRLDYN 237
Query: 243 NK-HERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R LE L + K GE++ + +G + ++ +QR G +VLD F
Sbjct: 238 DIIFHRADFLEVDLYKER-KIGEIVDFNPKKGLFVNTGKGILLLLEVQRPGRKVLDFKSF 296
Query: 298 LLGCPVIIGCIV 309
G +IG +
Sbjct: 297 YNGSRQLIGQVF 308
>gi|87302396|ref|ZP_01085221.1| methionyl-tRNA formyltransferase [Synechococcus sp. WH 5701]
gi|87283321|gb|EAQ75277.1| methionyl-tRNA formyltransferase [Synechococcus sp. WH 5701]
Length = 341
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 109/342 (31%), Positives = 167/342 (48%), Gaps = 35/342 (10%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT +AV +L+ALV++ H +V V +QP R G RG + SAV +A E +P
Sbjct: 1 MKILFWGTPAYAVPSLEALVAAGHELVGVVSQPDRRRG-RGAALMPSAVKARALELGVPV 59
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ +E Q + ADV+VVVA+G ++P+ +L LG +NGH SLLPRWRGAA
Sbjct: 60 FTPVRIRREPEMQAELGALGADVSVVVAFGQLLPKEVLAEPPLGCWNGHGSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ ++ GD ETG+ IM M++ LDTGPV R++ I A L + LS L A +VE
Sbjct: 120 PIQWCLIEGDAETGVGIMAMEEGLDTGPVLLERRLAIGLLETAAQLGERLSRLTAELLVE 179
Query: 181 AMDKL----------EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
AM + L L PQ + G+T+A + K + +++ A +H + L
Sbjct: 180 AMPLIAAAGPGPEADRWRQLGLHPQPQEGLTHARLLQKDDYAISWNAPALAIHRRVMGLH 239
Query: 231 P-----FPGAWLEMMIGNKHERIKLLE-----SQLVEGEGKP--------GEVIN----P 268
P + G L+++ R + + L + G+P G V+
Sbjct: 240 PGARTTWRGQRLKLLATEPLVRRLADQLSAEGASLAQRWGQPAQTAWPAVGTVLEVAEGV 299
Query: 269 NFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+A + I Q G + G L +G G
Sbjct: 300 GLVVATGGCPLLIREAQLEGKKASGGGAMLQQLRARVGDGFG 341
>gi|124265477|ref|YP_001019481.1| methionyl-tRNA formyltransferase [Methylibium petroleiphilum PM1]
gi|166215481|sp|A2SCF7|FMT_METPP RecName: Full=Methionyl-tRNA formyltransferase
gi|124258252|gb|ABM93246.1| methionyl-tRNA formyltransferase [Methylibium petroleiphilum PM1]
Length = 315
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 122/308 (39%), Positives = 161/308 (52%), Gaps = 17/308 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ F GT EFA L+ L+ + + V TQP RPAG RGLK SAV A E L
Sbjct: 1 MRIAFAGTPEFARVALRQLLDAGFDVPLVLTQPDRPAG-RGLKLQASAVKALAVERGLAV 59
Query: 63 LVPTKLGQEEYEQFLSF---------NADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P L + + D VV AYGL++P +L G N HASLL
Sbjct: 60 TQPRSLRLDGKYPDDASAAREALEAAQLDAMVVAAYGLILPAWVLKLPARGCLNIHASLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGAAPI RAI AGD ETGI IM+MD+ LDTG + + I S+ +TA L LS L
Sbjct: 120 PRWRGAAPIHRAIEAGDTETGITIMQMDEGLDTGDMLLSERESIRSDDSTATLHDRLSAL 179
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+VEA++ L PQ G+TYA KI K E +++ R AE + +RA PFP
Sbjct: 180 GGRLIVEALEAAACGGLVRRPQPAEGVTYAHKIDKAEAAIDWSRPAEEIERRVRAFDPFP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGR 290
GA + E +KL + + G PG V++ +AC ++ +++LQR GGR
Sbjct: 240 GASFQ----QAGETVKLWRAAVAPQRGAPGTVLSAAEGVLRVACGDLSLDLLQLQRPGGR 295
Query: 291 VLDIGDFL 298
+ DFL
Sbjct: 296 RVGARDFL 303
>gi|224533018|ref|ZP_03673624.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi WI91-23]
gi|224512012|gb|EEF82407.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi WI91-23]
Length = 312
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 82/312 (26%), Positives = 146/312 (46%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ F+ +S A+ + +V + +V V T P +P G RG K + + +A ++
Sbjct: 1 MKIFFVSSSSIALEVFKEIVK-HYEVVGVLTLPDKPKG-RGQKLSQNVIKSEAIARNIKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P L N D+ +V +YG + + L+ G N H SLLP++RG +PI
Sbjct: 59 LDPLILDDNVLNLVRDLNPDLMLVFSYGKIFKKEFLDLFPKGCINVHPSLLPKYRGVSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD +G+ I M +D+G + + I S + + + +S L ++EA+
Sbjct: 119 QSAILNGDCVSGVTIQSMALEMDSGNILVQKNFKIRSYDTSHDISKLVSSLSPSLVLEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+K+ + L PQ + T+ + K ++F SA + N I A +P+P +
Sbjct: 179 EKISKGFL-GIPQKSSEATFCSFLKKESGFIDFNLSAFEIKNKINACNPWPLVRARLDYN 237
Query: 243 NK-HERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R LE L + K GE++ + +G + ++ +QR G +VLD F
Sbjct: 238 DIIFHRADFLEVDLYKER-KIGEIVDFNPKKGLFVNTGKGILLLLEVQRPGRKVLDFKSF 296
Query: 298 LLGCPVIIGCIV 309
G +IG +
Sbjct: 297 YNGSRQLIGQVF 308
>gi|195941803|ref|ZP_03087185.1| methionyl-tRNA formyltransferase (fmt) [Borrelia burgdorferi 80a]
gi|216264273|ref|ZP_03436265.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi 156a]
gi|215980746|gb|EEC21553.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi 156a]
gi|312148037|gb|ADQ30696.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi JD1]
gi|312149305|gb|ADQ29376.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi N40]
Length = 312
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 82/312 (26%), Positives = 148/312 (47%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ F+ +S A+ + +V + +V V T P +P G RG K + + +A ++
Sbjct: 1 MKIFFVSSSSIALEVFKEIVK-HYEVVGVLTLPDKPKG-RGQKLSQNVIKSEAIARNIKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P L N D+ +V +YG + + L+ G N H SLLP++RG +PI
Sbjct: 59 LDPLILDDNVLNLVRDLNPDLMLVFSYGKIFKKEFLDLFPKGCINVHPSLLPKYRGVSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD +G+ I M +D+G + + I S + + + +S L ++EA+
Sbjct: 119 QSAILNGDCVSGVTIQSMALEMDSGNILVQKNFKIRSYDTSHDISKLVSSLSPSLVLEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+K+ + L PQ + T+ + K ++F SA + N I A +P+P + +
Sbjct: 179 EKISKGFL-GIPQKSSEATFCSFLKKESGFIDFNLSAFEIKNKINACNPWPLVRVRLDYN 237
Query: 243 NK-HERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R LE L + K GE+++ + +G + ++ +QR G +VLD F
Sbjct: 238 DIIFHRADFLEVDLYKER-KIGEIVDFNPEKGLFVNTGKGILLLLEVQRPGRKVLDFKSF 296
Query: 298 LLGCPVIIGCIV 309
G +IG +
Sbjct: 297 YNGSRQLIGQVF 308
>gi|269837206|ref|YP_003319434.1| methionyl-tRNA formyltransferase [Sphaerobacter thermophilus DSM
20745]
gi|269786469|gb|ACZ38612.1| methionyl-tRNA formyltransferase [Sphaerobacter thermophilus DSM
20745]
Length = 314
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 96/313 (30%), Positives = 156/313 (49%), Gaps = 7/313 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQAL-VSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M + VVF+G+ FAV +L+AL + + +I V TQP RPAGR G + AV A E
Sbjct: 1 MAISVVFLGSPAFAVPSLRALALDARFTIPLVVTQPDRPAGR-GRRPRPPAVKDAAIELG 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP P E+ + DV VVVAYG ++ Q +L+ LG N H SLLPR+RG
Sbjct: 60 LPVFQPETLRDPAAVERLAAAVPDVLVVVAYGEILRQSVLDLAPLGCLNVHPSLLPRYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
++P+Q AI+ GD ETGI+I+K+ + +D GP+ R+VP+ L + L+ L A +
Sbjct: 120 SSPVQAAILNGDTETGISIIKLVRRMDAGPIVAQRRVPLDGTETAGTLSERLANLAAEML 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + L PQ + TY +++ + R+++ + A + +RA+ P+P AW
Sbjct: 180 PDVVAAWVAGELEAEPQDDAAATYTRELTTADARIDWGKDAAEIERLVRAMQPWPKAWSI 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEV-INPNF-TIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + + PG + ++ +A + ++R+Q G R + D
Sbjct: 240 LEGRRLAVLACDISHKP--STEPPGTINVSARPPRVATGTTDLVLLRVQPEGKREMAAED 297
Query: 297 FLLGCPVIIGCIV 309
+ G + G
Sbjct: 298 WARGARLPHGARF 310
>gi|297380319|gb|ADI35206.1| methionyl-tRNA formyltransferase [Helicobacter pylori v225d]
Length = 303
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 85/310 (27%), Positives = 137/310 (44%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+ +VFMGT FA L+ALV +V ++TQ +P G R + E +
Sbjct: 1 MHIVFMGTPGFAEVILRALVKDEEIEVVGLFTQMDKPFG-RKKELKAPETKTYILENHLN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P L E + D VVVAYG ++P+ +L+ N HASLLP++RGA
Sbjct: 60 IPIFQPQSLKDSEVQILKDLKPDFIVVVAYGKILPKEVLSIA--PCINAHASLLPKYRGA 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI I+ D GI M MD LD+G + ++ L L+ + A ++
Sbjct: 118 SPIHEMILNDDKIYGINTMLMDVGLDSGDILESASFLREEYLDLDALSLRLAHMGATLLL 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ PQ ++ +KI+K + V F + + S + +
Sbjct: 178 STLKNFSSITRK--PQDHAQASFCKKITKSDGLVGFKDAKSLFLKSLAFKS---WPEIFL 232
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K ++L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L
Sbjct: 233 ENSLKLLGVELVENEKSHKEGEILEIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKDYLN 292
Query: 300 GCPVIIGCIV 309
G + G I+
Sbjct: 293 GKRLKAGGIL 302
>gi|218887130|ref|YP_002436451.1| methionyl-tRNA formyltransferase [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758084|gb|ACL08983.1| methionyl-tRNA formyltransferase [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 369
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 112/322 (34%), Positives = 163/322 (50%), Gaps = 23/322 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
LRVVFMGT FA ++ L+ +++ YTQP RP G RG + V A E +
Sbjct: 35 PLRVVFMGTPGFAAVIMRHLLEWDGCEVIAAYTQPDRPCG-RGQQCRPPEVKLLAMEHGV 93
Query: 61 PALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P +E + S DV VV AYGL++PQ +L+ +LG N HASLLPR RGA
Sbjct: 94 PVYQPLNFKTEEAVAELRSLRPDVLVVAAYGLILPQSVLDIPRLGPVNVHASLLPRLRGA 153
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRA+MAGD TG+ IM+M+ LDTGP+ + + I N L +L+ L +
Sbjct: 154 APIQRAVMAGDAVTGVTIMRMEASLDTGPMLLQKAMGIDINDTAGDLHDQLAELGGRLLT 213
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
A+ KL PQ + TYA K++K + +++ R A VH HIR ++P+PGA+ +
Sbjct: 214 VALGKLADGTAVAIPQDHDRATYAAKLTKADGLIDWNRPAAQVHAHIRGVTPWPGAYCTI 273
Query: 240 MIGNKHE----------------RIKLLESQLVEGEGK-PGEVI---NPNFTIACSQGAV 279
++ R L S+ E +G PG ++ + IAC+
Sbjct: 274 QRQSQGLQGGTVQKELRVSLGPGRFGPLRSEAPEYDGAAPGTIVGLVDEQLAIACADRLY 333
Query: 280 RIMRLQRAGGRVLDIGDFLLGC 301
+ ++ A + +D FL G
Sbjct: 334 LVDSIRPADRKPMDARAFLCGY 355
>gi|111114885|ref|YP_709503.1| methionyl-tRNA formyltransferase [Borrelia afzelii PKo]
gi|123047076|sp|Q0SPA1|FMT_BORAP RecName: Full=Methionyl-tRNA formyltransferase
gi|110890159|gb|ABH01327.1| methionyl-tRNA formyltransferase [Borrelia afzelii PKo]
Length = 315
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 149/312 (47%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ F+ +S A+ + +V + +V V T P +P G RG K + + +A ++
Sbjct: 1 MKIFFVSSSSIALEVFKEIVK-HYEVVGVLTLPDKPKG-RGQKLSQNVIKLEAIAKNIKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P L N D+ +V +YG + + L+ G N H SLLP++RG +PI
Sbjct: 59 FDPLILDDNILNLIRDLNPDLMLVFSYGKIFKKEFLDIFPKGCINVHPSLLPKYRGVSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD +GI I M +D+G + + I S + + + +S L + ++EA+
Sbjct: 119 QSAILNGDCVSGITIQNMALKMDSGNILVQKNFKIKSCDTSYDISKLVSSLSPNLVLEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+K+ + L PQ + T+ K V+F SA + N I A +P+P A + G
Sbjct: 179 EKIGKGFL-GIPQKSSEATFCSFFKKESGFVDFNLSAFEIKNRINACNPWPLARARLDYG 237
Query: 243 NK-HERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R L+ L + + K GE+++ + +G + ++ +QR G RVLD F
Sbjct: 238 DIIFHRADFLKIDLYKEK-KVGEIVDFDSEKGLFVNTGEGILLLLEVQRPGRRVLDYKSF 296
Query: 298 LLGCPVIIGCIV 309
G +IG +
Sbjct: 297 YNGSRQLIGQVF 308
>gi|15594410|ref|NP_212198.1| methionyl-tRNA formyltransferase (fmt) [Borrelia burgdorferi B31]
gi|218249868|ref|YP_002374595.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi ZS7]
gi|226322024|ref|ZP_03797549.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi Bol26]
gi|6685429|sp|O51091|FMT_BORBU RecName: Full=Methionyl-tRNA formyltransferase
gi|226704291|sp|B7J100|FMT_BORBZ RecName: Full=Methionyl-tRNA formyltransferase
gi|2687939|gb|AAC66446.1| methionyl-tRNA formyltransferase (fmt) [Borrelia burgdorferi B31]
gi|218165056|gb|ACK75117.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi ZS7]
gi|226232614|gb|EEH31368.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi Bol26]
Length = 312
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 83/312 (26%), Positives = 148/312 (47%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ F+ +S A+ + +V + +V V T P RP G RG K + + +A ++
Sbjct: 1 MKIFFVSSSSIALEVFKEIVK-HYEVVGVLTLPDRPKG-RGQKLSQNVIKSEAIARNIKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P L N D+ +V +YG + + L+ G N H SLLP++RG +PI
Sbjct: 59 LDPLILDDNVLNLVRDLNPDLMLVFSYGKIFKKEFLDLFPKGCINVHPSLLPKYRGVSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD +G+ I M +D+G + + I S + + + +S L ++EA+
Sbjct: 119 QSAILNGDCVSGVTIQSMALEMDSGNILVQKNFKIRSYDTSHDISKLVSSLSPSLVLEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+K+ + L PQ + T+ + K ++F SA + N I A +P+P + +
Sbjct: 179 EKISKGFL-GIPQKSSEATFCSFLKKESGFIDFNLSAFEIKNKINACNPWPLVRVRLDYN 237
Query: 243 NK-HERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R LE L + K GE+++ + +G + ++ +QR G +VLD F
Sbjct: 238 DIIFHRADFLEVDLYKER-KIGEIVDFNPEKGLFVNTGKGILLLLEVQRPGRKVLDFKSF 296
Query: 298 LLGCPVIIGCIV 309
G +IG +
Sbjct: 297 YNGSRQLIGQVF 308
>gi|32491244|ref|NP_871498.1| hypothetical protein WGLp495 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|31340071|sp|Q8D259|FMT_WIGBR RecName: Full=Methionyl-tRNA formyltransferase
gi|25166451|dbj|BAC24641.1| fmt [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 319
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 94/298 (31%), Positives = 161/298 (54%), Gaps = 13/298 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GTS+F+ L AL+ S H +V + P R +G RG K S V K A+ +++
Sbjct: 6 SLRIVFAGTSQFSYEFLYALLESRHVVVGILANPDRFSG-RGHKIKFSPVKKLAKYYNIK 64
Query: 62 ALVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P + D+ +VV+Y +++ ++IL+ +LG N H+SLLPRWRGA
Sbjct: 65 ILQPDSTESLDNLENDLKKMRCDIIIVVSYSIILSKKILSLPRLGCINLHSSLLPRWRGA 124
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API RA+ +GD TGI I+KM+ +DTGP+ + R I T L +LS++ A++
Sbjct: 125 APIHRALQSGDKTTGITIIKMNDEIDTGPILYKRVCSIQDTDTTETLLNKLSIIGKAAII 184
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + ++ L Q + TYA+KI+K E ++N+ A N+ +IRA +P+P ++
Sbjct: 185 QLLHQISIGKYNLQYQNNSIATYAKKINKKEAKINWNLPAINIDRNIRAFNPWPVSYF-- 242
Query: 240 MIGNKHERIKLLESQLVEGE---GKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRV 291
+ I+ ++++ PG+++N + +G + + LQ +G +
Sbjct: 243 --WISGKYIRAWKAKIDINNIFISDPGKILNVNSDGIHVGTGKGILILEVLQLSGKKR 298
>gi|325972107|ref|YP_004248298.1| Methionyl-tRNA formyltransferase [Spirochaeta sp. Buddy]
gi|324027345|gb|ADY14104.1| Methionyl-tRNA formyltransferase [Spirochaeta sp. Buddy]
Length = 314
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 90/317 (28%), Positives = 143/317 (45%), Gaps = 12/317 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT + AV TL+AL S I +V T +P G RG V SAV +A L
Sbjct: 1 MRILFAGTPQVAVPTLRAL-SQHFEIGAVLTNTDKP-GARGKALVPSAVKTEAVSLGLRV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L +LG E + D V AYG + + L+ N H SLLP+ RG +PI
Sbjct: 59 LQYDRLGSEVRAEVAETGCDTLVCFAYGRLFGPKFLSLFSGETLNIHPSLLPQLRGPSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q +I+ +E+GI+I ++ K +D+G + + + + L +S+ A V A+
Sbjct: 119 QGSILNQLSESGISIQRIAKEMDSGDLLMREHFLLQGDETSESLSSFVSLKAADLAVRAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
L+ + Q E TY I+ + V+F +SA+ +H IRAL P+P A
Sbjct: 179 LDLQAGKARFTAQ-EGPATYTSLITAEMSVVDFSKSAKEIHAQIRALYPWPKARTLYNGQ 237
Query: 243 N---KHERIKLLES--QLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + E+ + V+ G V+ IA G + + +Q + +D
Sbjct: 238 SLLLTGVYGTVFEAGEEKVDANIPVGTVVQKQKGKGIAIATGDGLLWVTSMQLEKRKEMD 297
Query: 294 IGDFLLGCPVIIGCIVG 310
FL G +G +G
Sbjct: 298 WSSFLNGNQGFLGARLG 314
>gi|221217388|ref|ZP_03588859.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi 72a]
gi|224533897|ref|ZP_03674482.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi CA-11.2a]
gi|225549721|ref|ZP_03770686.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi 118a]
gi|221192666|gb|EEE18882.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi 72a]
gi|224512900|gb|EEF83266.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi CA-11.2a]
gi|225369681|gb|EEG99129.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi 118a]
Length = 312
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 82/312 (26%), Positives = 148/312 (47%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ F+ +S A+ + +V + +V V T P +P G RG K + + +A ++
Sbjct: 1 MKIFFVSSSSIALEVFKEIVK-HYEVVGVLTLPDKPRG-RGQKLSQNVIKSEAIARNIKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P L N D+ +V +YG + + L+ G N H SLLP++RG +PI
Sbjct: 59 LDPLILDDNVLNLVRDLNPDLMLVFSYGKIFKKEFLDLFPKGCINVHPSLLPKYRGVSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD +G+ I M +D+G + + I S + + + +S L ++EA+
Sbjct: 119 QSAILNGDCVSGVTIQSMALEMDSGNILVQKNFKIRSYDTSHDISKLVSSLSPSLVLEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+K+ + L PQ + T+ + K ++F SA + N I A +P+P + +
Sbjct: 179 EKISKGFL-GIPQKSSEATFCSFLKKESGFIDFNLSAFEIKNKINACNPWPLVRVRLDYN 237
Query: 243 NK-HERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R LE L + K GE+++ + +G + ++ +QR G +VLD F
Sbjct: 238 DIIFHRADFLEVDLYKER-KIGEIVDFNPEKGLFVNTGKGILLLLEVQRPGRKVLDFKSF 296
Query: 298 LLGCPVIIGCIV 309
G +IG +
Sbjct: 297 YNGSRQLIGQVF 308
>gi|317180873|dbj|BAJ58659.1| methionyl-tRNA formyltransferase [Helicobacter pylori F32]
Length = 303
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 142/310 (45%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+R+VFMGT FA L+ALV + +V ++TQ +P G R + E +
Sbjct: 1 MRIVFMGTPGFAEVILRALVGNKDIEVVGLFTQMDKPFG-RKKELKAPETKTYILENHLN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P L + E + + D VVVAYG ++P+ +L N HASLLP++RGA
Sbjct: 60 IPIFQPQSLKEPEVQILKALKPDFIVVVAYGKILPKEVLEIA--PCINLHASLLPKYRGA 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI I+ D GI+ M MD LD+G + ++ L +L+ + A ++
Sbjct: 118 SPIHEMILNDDKIYGISTMLMDLELDSGDILESASFLREEYLDLDTLSLKLAHMGAALLL 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ PQ ++ +KI+K + V F + + S + +
Sbjct: 178 STLKNFSSITRK--PQNHAQASFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEIFL 232
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K ++L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L
Sbjct: 233 ESSLKLLEVELVENEKSHKEGEILEIDERGVLVGCLKGSVRIARLQAVGKKPLKAKDYLN 292
Query: 300 GCPVIIGCIV 309
G + I I+
Sbjct: 293 GKRLKISGIL 302
>gi|225549338|ref|ZP_03770311.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi 94a]
gi|225370196|gb|EEG99636.1| methionyl-tRNA formyltransferase [Borrelia burgdorferi 94a]
Length = 312
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 83/312 (26%), Positives = 147/312 (47%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ F+ +S A+ + +V + +V V T P RP G RG K + + +A ++
Sbjct: 1 MKIFFVSSSSIALEVFKEIVK-HYEVVGVLTLPDRPKG-RGQKLSQNVIKSEAIARNIKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P L N D+ +V +YG + + L+ G N H SLLP++RG +PI
Sbjct: 59 LDPLILDDNVLNLVRDLNPDLMLVFSYGKIFKKEFLDLFPKGCINVHPSLLPKYRGVSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD +G+ I M +D+G + + I S + + + +S L ++EA+
Sbjct: 119 QSAILNGDCVSGVTIQSMALEMDSGNILVQKNFKIRSYDTSHDISKLVSSLSPSLVLEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+K+ + L PQ + T+ + K ++F SA + N I A +P+P +
Sbjct: 179 EKISKGFL-GIPQKSSEATFCSFLKKESGFIDFNLSAFEIKNKINACNPWPLVRARLDYN 237
Query: 243 NK-HERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R LE L + K GE+++ + +G + ++ +QR G +VLD F
Sbjct: 238 DIIFHRADFLEVDLYKER-KIGEIVDFNPEKGLFVNTGKGILLLLEVQRPGRKVLDFKSF 296
Query: 298 LLGCPVIIGCIV 309
G +IG +
Sbjct: 297 YNGSRQLIGQVF 308
>gi|227496159|ref|ZP_03926465.1| methionyl-tRNA formyltransferase [Actinomyces urogenitalis DSM
15434]
gi|226834304|gb|EEH66687.1| methionyl-tRNA formyltransferase [Actinomyces urogenitalis DSM
15434]
Length = 323
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 91/310 (29%), Positives = 146/310 (47%), Gaps = 3/310 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+RV+F GT E A+ L+ L+ S H +V V T+ G RG S V A++ L
Sbjct: 1 MRVLFAGTPEVALPVLRWLMDSPSHEVVGVLTRADARQG-RGRTLHPSPVAALARQAGLE 59
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +EE ++++ DVAVVVAYG ++P +L + G+ N H SLLP WRGAA
Sbjct: 60 VRTPATLREEETQEWVRGLHADVAVVVAYGRLVPAALLEVPQHGWLNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRAI+AGD TG ++ ++++ LDTGPV I L L+ + E
Sbjct: 120 PVQRAIIAGDTLTGASVFRLEEGLDTGPVYAHVTASIEDEDTAGDLLARLAEKGVALVDE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+++L Q E+GIT A ++ + + + +A + IR ++P PGA
Sbjct: 180 VLEQLASGTAAPVAQREDGITLAPVLTPADGEIRWSETAAAIDRRIRGVTPAPGAHTTYE 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
++ + +V + AVR+ ++ AG + + + G
Sbjct: 240 GARLRLGPVTQVPEVTDLPAGMLQVSKHEVLVGTGGCAVRLGQVAPAGKKWMAADAWARG 299
Query: 301 CPVIIGCIVG 310
G ++G
Sbjct: 300 AHPAAGAVLG 309
>gi|320534325|ref|ZP_08034814.1| methionyl-tRNA formyltransferase [Actinomyces sp. oral taxon 171
str. F0337]
gi|320133460|gb|EFW25919.1| methionyl-tRNA formyltransferase [Actinomyces sp. oral taxon 171
str. F0337]
Length = 324
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 93/314 (29%), Positives = 150/314 (47%), Gaps = 9/314 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT E A+ TL+AL++S H +V V T+ G RG S V +++ L
Sbjct: 1 MRVLFAGTPEAALPTLEALLASKHDVVGVLTRADARQG-RGRTLHPSPVAAMSRDAGLDV 59
Query: 63 LVPTK----LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
P + + + ADVAVVVAYG ++P +L+ G+ N H SLLP WRG
Sbjct: 60 RTPATLKGEHADDVRDWVRALRADVAVVVAYGRLVPADLLDVPVHGWLNLHFSLLPAWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+QRA++AGD TG ++ ++++ LDTGPV IS + L + L+ A +
Sbjct: 120 AAPVQRAVIAGDEVTGASVFRLEEGLDTGPVYGRLTEAISGRDTSGDLLERLAQAGAPLV 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + + ++ PQ + T A +S + +V + A + IR +SP PGA
Sbjct: 180 LDVLRSVGDGSVRPEPQDDALATLAPMLSSADGQVRWDDPALTIDRRIRGVSPAPGAHTT 239
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R+ + + PG++ + AVR+ ++ AG +
Sbjct: 240 Y--QGARFRLGPVTPVPEVTDLLPGQLRATKHEALVGTGGCAVRLGQVAPAGRSWMPADA 297
Query: 297 FLLGCPVIIGCIVG 310
+ G G I+G
Sbjct: 298 WARGARPEAGVILG 311
>gi|139436887|ref|ZP_01771047.1| Hypothetical protein COLAER_00018 [Collinsella aerofaciens ATCC
25986]
gi|133776534|gb|EBA40354.1| Hypothetical protein COLAER_00018 [Collinsella aerofaciens ATCC
25986]
Length = 306
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 95/290 (32%), Positives = 145/290 (50%), Gaps = 8/290 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV +L +LV + + I V T+P G RG K S V KA E L
Sbjct: 1 MRIVFMGTPDFAVPSLTSLVEAGNEIALVVTRPDAVRG-RGKKLEPSPVKAKALELGLRV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ ++ E E + AD+ V AYG ++P +L+ LG N HASLLPRWRGAAPI
Sbjct: 60 IEANRMTPEVVEALQAARADIFCVAAYGCILPDEVLHMAPLGIVNVHASLLPRWRGAAPI 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI+AGD G++IM++ +DTG + + L EL L + + +
Sbjct: 120 QRAILAGDEVAGVSIMRIGHGVDTGAYCAQAST-SVAGKHAEALTMELGELGGKLLADTL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
L + Q E +T+A KISK E R++ +A + H+ A S A +
Sbjct: 179 PSLADGTAVWTEQDEALVTHAAKISKLEMRLDPQMAALDCVRHVLASSDTAPARCVIAG- 237
Query: 243 NKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGR 290
+ +++L++ + G V N + S G+V ++ ++ G R
Sbjct: 238 ---KTVRVLDAAPADVSLGEGAVDVKNKRVYLGLSDGSVELLEVKPDGKR 284
>gi|317970134|ref|ZP_07971524.1| methionyl-tRNA formyltransferase [Synechococcus sp. CB0205]
Length = 343
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 99/343 (28%), Positives = 148/343 (43%), Gaps = 36/343 (10%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT +A +L ALV++ H +V V TQP R G RG V S V +A E +P
Sbjct: 1 MRILFWGTPAYAAVSLDALVNAGHELVGVVTQPDRRRG-RGKALVPSPVKARAMELGIPV 59
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ ++ Q ADV VVVA+G ++P+ +L LG +NGH SLLPRWRGA
Sbjct: 60 FTPERIRKDPECQQQLAELGADVYVVVAFGQILPREVLQQPPLGCWNGHGSLLPRWRGAG 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ +++ GD ETG+ IM M++ LDTGPV R +PI N L + L+ L +VE
Sbjct: 120 PIQWSLIEGDAETGVGIMAMEEGLDTGPVLLERAIPIGLRENAHQLAERLAQLTGELLVE 179
Query: 181 AMDKLE---QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA-W 236
A+ ++E Q E+ + + A+ +
Sbjct: 180 ALPQIEAAGPGPEQERLQRLGVRVQPEEGMTYARMLAKEDFQIDWSGSALAVHRKVMGLY 239
Query: 237 LEMMIGNKHERIKLLESQLVE-------------------------GEGKPGEVI----N 267
K +R+K+L S+ + PG V+ +
Sbjct: 240 PGASSSWKGKRLKVLSSEPLIKRLTAELSPEAKALAERWGLNPGEGSSHTPGTVLECVDS 299
Query: 268 PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+A S + I Q G L V+ G +G
Sbjct: 300 TGLVVASSGCPLLIREAQLEGKSASHGTQLLQQLGVVPGDRLG 342
>gi|298346830|ref|YP_003719517.1| methionyl-tRNA formyltransferase [Mobiluncus curtisii ATCC 43063]
gi|298236891|gb|ADI68023.1| methionyl-tRNA formyltransferase [Mobiluncus curtisii ATCC 43063]
Length = 321
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 92/317 (29%), Positives = 150/317 (47%), Gaps = 16/317 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF G+ A+ L+ L S+H +V+V ++P P+G RG K SAV A + L
Sbjct: 1 MRIVFAGSPPVALPVLEYLEQSAHDLVAVLSRPDAPSG-RGRKMAPSAVSSYATQHDLML 59
Query: 63 LVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K E D+ +VVAYG ++P IL + G+ N H SLLPRWRGAA
Sbjct: 60 YQPKTLKNNAEAATFLRDLQPDLGIVVAYGAILPADILEIPQFGWINIHFSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRA+ AGD ETG+ + ++++ LDTGP+ + + QEL+ L + +
Sbjct: 120 PVQRALQAGDTETGVTVFQLEQALDTGPIYATCSYTVPEQATAGDVLQELAELSVKPLEQ 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ + + P PQ + GITYA + E +++ + + + I+ P PGAW
Sbjct: 180 ALSMIARGVAP-EPQSDIGITYASPLQPAEGEIDWSAADDTIACQIKGFMPSPGAWT--- 235
Query: 241 IGNKHERIKLLESQLVE------GEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVL 292
+ R+KL ++ +PG++ + V + + AG + +
Sbjct: 236 -MWQGSRMKLGVLEVNPPVTMPIPSLEPGQIFTTRHEVWVGTGSAPVCLGAVAPAGKKPM 294
Query: 293 DIGDFLLGCPVIIGCIV 309
+ G + G
Sbjct: 295 PADAWARGAHLESGAKF 311
>gi|216263866|ref|ZP_03435860.1| methionyl-tRNA formyltransferase [Borrelia afzelii ACA-1]
gi|215979910|gb|EEC20732.1| methionyl-tRNA formyltransferase [Borrelia afzelii ACA-1]
Length = 315
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 85/312 (27%), Positives = 149/312 (47%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ F+ +S A+ + +V + +V V T P +P G RG K + + +A ++
Sbjct: 1 MKIFFVSSSSIALEVFKEIVK-HYEVVGVLTLPDKPKG-RGQKLSQNVIKLEAIAKNIKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P L N D+ +V +YG + + L+ G N H SLLP++RG +PI
Sbjct: 59 FDPLILDDNILNLIRDLNPDLMLVFSYGKIFKKEFLDIFPKGCINVHPSLLPKYRGVSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD +GI I M +D+G + + I S + + + +S L + ++EA+
Sbjct: 119 QSAILNGDCVSGITIQNMALKMDSGNILVQKNFKIKSYDTSYDISKLVSSLSPNLVLEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+K+ + L PQ + T+ K V+F SA + N I A +P+P A + G
Sbjct: 179 EKIGKGFL-GIPQKSSEATFCSFFKKESGFVDFNLSAFEIKNRINACNPWPLARARLDYG 237
Query: 243 NK-HERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R L+ L + + K GE+++ + +G + ++ +QR G RVLD F
Sbjct: 238 DIIFHRADFLKIDLYKEK-KVGEIVDFDSEKGLFVNTGEGILLLLEVQRPGRRVLDYKSF 296
Query: 298 LLGCPVIIGCIV 309
G +IG +
Sbjct: 297 YNGSRQLIGQVF 308
>gi|219685378|ref|ZP_03540197.1| methionyl-tRNA formyltransferase [Borrelia garinii Far04]
gi|219673151|gb|EED30171.1| methionyl-tRNA formyltransferase [Borrelia garinii Far04]
Length = 315
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 81/312 (25%), Positives = 144/312 (46%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ F+ +S A+ + ++ + +V V T P +P G RG K + + +A +
Sbjct: 1 MKIFFVSSSSIALEVFKEIL-RHYEVVGVLTLPDKPKG-RGQKLSQNVIKVEAIAKDIKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P L N D+ +V +YG + + L+ +G N H SLLP++RG +PI
Sbjct: 59 FDPLILDNNTLNSIRDLNPDLMLVFSYGKIFKKEFLDIFPMGCINIHPSLLPKYRGVSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD +GI I M +D+G + + I S + + + +S L ++EA+
Sbjct: 119 QSAILNGDCVSGITIQSMALEMDSGNILVQKNFKIRSYDTSYDISKLVSSLSPSLVLEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
K+ L PQ + T+ + K ++F SA + N I A +P+P ++
Sbjct: 179 KKISNGFL-GIPQKSSEATFCSFLKKELGFIDFNLSAFEIKNRINACNPWPLVRAKLDYS 237
Query: 243 NK-HERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R E L + K GE+++ + +G + ++ +QR G RVLD F
Sbjct: 238 DIIFHRADFWEIDLYKER-KVGEIVDFDPERGLFVNTGKGILLLLEVQRPGRRVLDFKSF 296
Query: 298 LLGCPVIIGCIV 309
G +IG +
Sbjct: 297 YNGSRQLIGQVF 308
>gi|254479561|ref|ZP_05092876.1| methionyl-tRNA formyltransferase [Carboxydibrachium pacificum DSM
12653]
gi|214034499|gb|EEB75258.1| methionyl-tRNA formyltransferase [Carboxydibrachium pacificum DSM
12653]
Length = 280
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 94/283 (33%), Positives = 147/283 (51%), Gaps = 11/283 (3%)
Query: 33 TQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQF--LSFNADVAVVVAYG 90
TQP + G RG+K S V + A + + L P + N +V VV AYG
Sbjct: 2 TQPDKQRG-RGMKVSFSPVKELALQKGVKVLQPESVKNNPEFLQELKELNPEVIVVAAYG 60
Query: 91 LVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVA 150
++P+ IL + G N HASLLP++RGAAPI AI+ G+ ETGI M MDK LDTG +
Sbjct: 61 KILPEEILTLPEYGCINVHASLLPKYRGAAPINWAIINGEKETGITTMLMDKGLDTGDML 120
Query: 151 FMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGE 210
R + I + + L +L+ L A + E + KL++ L Q + TYA I+K
Sbjct: 121 LKRSIAIEEDDDAQTLHDKLANLGAEVLSETLKKLKEGKLIPEKQKDEEATYAPIITKEM 180
Query: 211 TRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVE--GEGKPGEVIN- 267
+++ A + N IR L P+PG + + +K+ ++++VE G PG V+
Sbjct: 181 GHIDWKSPACRIRNLIRGLKPWPGCYTFY----DGKMLKIWKAEVVEHFGNEPPGSVLKS 236
Query: 268 -PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ C + A+RI+ +Q+ G R + I ++L+G + G I+
Sbjct: 237 KDELIVKCGENALRILEIQQEGSRKMGIREYLIGHNIPEGTIL 279
>gi|229815472|ref|ZP_04445804.1| hypothetical protein COLINT_02520 [Collinsella intestinalis DSM
13280]
gi|229809005|gb|EEP44775.1| hypothetical protein COLINT_02520 [Collinsella intestinalis DSM
13280]
Length = 308
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 90/301 (29%), Positives = 143/301 (47%), Gaps = 4/301 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT FAV +L+ L ++ H + V T+P RG K S V + A EF LP
Sbjct: 1 MRVVFMGTPAFAVPSLRRLAAA-HEVALVLTRPDAVR-SRGKKLEPSPVKEAALEFDLPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ ++ E + + A++ V AYG ++P +L LG N HASLLPRWRGAAPI
Sbjct: 59 MEANRMTPEVLDVLRAAEAEIFCVAAYGCILPDEVLTMAPLGCVNVHASLLPRWRGAAPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QR+I+ GD ETG++IM++ +DTG + L EL+ L +V +
Sbjct: 119 QRSILEGDAETGVSIMRIGHGVDTGAYCAQASC-AVPGKSADELTAELAELGGDLLVSTL 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + + Q E+ +T+A KI+K E R++ A + A S A +
Sbjct: 178 PAIADGSAVWTEQDESLVTHAAKIAKAELRLDPAAGALENTRRVMASSNAAPARCVIAGK 237
Query: 243 N-KHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+ R ++ V + C+ G++ ++ ++ G R +D + G
Sbjct: 238 PVRVMRAAAADAASPSAAAGSFTVKGGRVYMGCADGSLELISIKPDGKREMDAKSWAAGQ 297
Query: 302 P 302
Sbjct: 298 R 298
>gi|315656711|ref|ZP_07909598.1| methionyl-tRNA formyltransferase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315492666|gb|EFU82270.1| methionyl-tRNA formyltransferase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 321
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 92/317 (29%), Positives = 151/317 (47%), Gaps = 16/317 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF G+ A+ L+ L S+H +V+V ++P P+G RG K SAV A + L
Sbjct: 1 MRIVFAGSPPVALPVLEYLEQSAHDLVAVLSRPDAPSG-RGRKMAPSAVSSYATQHDLML 59
Query: 63 LVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K E D+ +VVAYG ++P IL + G+ N H SLLPRWRGAA
Sbjct: 60 YQPKTLKNNAEAATFLRDLQPDLGIVVAYGAILPADILEIPQFGWINIHFSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRA+ AGD ETG+ + ++++ LDTGP+ + + QEL+ L + +
Sbjct: 120 PVQRALQAGDTETGVTVFQLEQALDTGPIYATCSYTVPEQATAGDVLQELAELSVKPLEQ 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ + + P PQ + GITYA + E +++ + + + I+ +P PGAW
Sbjct: 180 ALSMIARGVAP-EPQSDIGITYASPLQPAEGEIDWSAADDTIACQIKGFTPSPGAWT--- 235
Query: 241 IGNKHERIKLLESQLVE------GEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVL 292
+ R+KL ++ +PG++ + V + + AG + +
Sbjct: 236 -MWQGSRMKLGVLEVNPPVTMPIPSLEPGQIFTTRHEVWVGTGSAPVCLGAVAPAGKKPM 294
Query: 293 DIGDFLLGCPVIIGCIV 309
+ G + G
Sbjct: 295 PADAWARGAHLESGAKF 311
>gi|304389465|ref|ZP_07371428.1| methionyl-tRNA formyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304327275|gb|EFL94510.1| methionyl-tRNA formyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 321
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 92/317 (29%), Positives = 150/317 (47%), Gaps = 16/317 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF G+ A+ L+ L S+H +V+V ++P P+G RG K SAV A + L
Sbjct: 1 MRIVFAGSPPVALPVLEYLEQSAHDLVAVLSRPDAPSG-RGRKMAPSAVSSYATQHDLML 59
Query: 63 LVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K E D+ +VVAYG ++P IL + G+ N H SLLPRWRGAA
Sbjct: 60 YQPKTLKNNAEAATFLRDLQPDLGIVVAYGAILPADILEIPQFGWINIHFSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRA+ AGD ETG+ + +++ LDTGP+ + + QEL+ L + +
Sbjct: 120 PVQRALQAGDTETGVTVFQLEPALDTGPIYATCSYTVPEQATAGDVLQELAELSVKPLEQ 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ + + P PQ + GITYA + E +++ + + + I+ +P PGAW
Sbjct: 180 ALSMIARGVAP-EPQSDIGITYASPLQPAEGEIDWSAADDTIACQIKGFTPSPGAWT--- 235
Query: 241 IGNKHERIKLLESQLVE------GEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVL 292
+ R+KL ++ +PG++ + V + + AG + +
Sbjct: 236 -MWQGSRMKLGVLEVNPPVTMPIPSLEPGQIFTTRHEVWVGTGSAPVCLGAVAPAGKKPM 294
Query: 293 DIGDFLLGCPVIIGCIV 309
+ G + G
Sbjct: 295 PADAWARGAHLESGAKF 311
>gi|315655375|ref|ZP_07908275.1| methionyl-tRNA formyltransferase [Mobiluncus curtisii ATCC 51333]
gi|315490315|gb|EFU79940.1| methionyl-tRNA formyltransferase [Mobiluncus curtisii ATCC 51333]
Length = 321
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 93/317 (29%), Positives = 149/317 (47%), Gaps = 16/317 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF G+ A+ L+ L S+H +V+V ++P P+G RG K SAV A + L
Sbjct: 1 MRIVFAGSPPVALPVLEYLEQSAHDLVAVLSRPDAPSG-RGRKMAPSAVSSYATQHDLML 59
Query: 63 LVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K E D+ VVVAYG ++P IL + G+ N H SLLPRWRGAA
Sbjct: 60 YQPKTLKNNAEAATFLRDLQPDLGVVVAYGAILPADILEIPQFGWINIHFSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+QRA+ AGD ETG+ + +++ LDTGP+ + + QEL+ L + +
Sbjct: 120 PVQRALQAGDTETGVTVFQLEPTLDTGPIYATCSYAVPEQATAGDVLQELAELSVKPLEQ 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ + + P PQ + GITYA + E +++ + + I+ +P PGAW
Sbjct: 180 ALSMIARGVAP-EPQSDIGITYASPLQPAEGEIDWSVADNTIACQIKGFTPSPGAWT--- 235
Query: 241 IGNKHERIKLLESQLVE------GEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVL 292
+ R+KL ++ +PG++ + V + + AG + +
Sbjct: 236 -MWQGSRMKLGVLEVNPPITMPIPSLEPGQIFTTRHEVWVGTGSAPVCLGAVAPAGKKPM 294
Query: 293 DIGDFLLGCPVIIGCIV 309
+ G + G
Sbjct: 295 PADAWARGAHLESGAKF 311
>gi|219684792|ref|ZP_03539734.1| methionyl-tRNA formyltransferase [Borrelia garinii PBr]
gi|219671737|gb|EED28792.1| methionyl-tRNA formyltransferase [Borrelia garinii PBr]
Length = 315
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 81/312 (25%), Positives = 144/312 (46%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ F+ +S A+ + ++ + +V V T P +P G RG K + + +A +
Sbjct: 1 MKIFFVSSSSIALEVFKEIL-RHYEVVGVLTLPDKPKG-RGQKLSQNVIKVEAIAKDIKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P L N D+ +V +YG + + L+ +G N H SLLP++RG +PI
Sbjct: 59 FDPLILDNNTLNSIRDLNPDLMLVFSYGKIFKKEFLDIFPMGCINVHPSLLPKYRGVSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD GI I M +D+G + + I S + + + +S L ++EA+
Sbjct: 119 QSAILNGDCVGGITIQSMALEMDSGNILVQKNFKIRSYDTSYDISKLVSSLSPSLVLEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+K+ L PQ + T+ + K ++F SA + N I A +P+P ++
Sbjct: 179 EKISNGFL-GIPQKSSEATFCSFLKKELGFIDFNLSAFEIKNRINACNPWPLVRAKLDYS 237
Query: 243 NK-HERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R E L + K GE+++ + +G + ++ +QR G RVLD F
Sbjct: 238 DIIFHRADFWEIDLYKER-KVGEIVDFDPERGLFVNTGKGILLLLEVQRPGRRVLDFKSF 296
Query: 298 LLGCPVIIGCIV 309
G +IG +
Sbjct: 297 YNGSRQLIGQVF 308
>gi|197124463|ref|YP_002136414.1| methionyl-tRNA formyltransferase [Anaeromyxobacter sp. K]
gi|238689873|sp|B4UGK3|FMT_ANASK RecName: Full=Methionyl-tRNA formyltransferase
gi|196174312|gb|ACG75285.1| methionyl-tRNA formyltransferase [Anaeromyxobacter sp. K]
Length = 312
Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 102/305 (33%), Positives = 145/305 (47%), Gaps = 6/305 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ F+GT FAVA L AL + H++V+V QP RPAG RG A A+ +P
Sbjct: 1 MRIAFLGTPAFAVAALDALDWAGHALVTVVAQPDRPAG-RGQALREPATKAWARARGVPV 59
Query: 63 LVPTKLGQ-EEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K+ + D VV AYG ++ + +L G N H SLLPRWRGAAP
Sbjct: 60 LQPEKVRDGTLAAALRALAPDALVVAAYGRILGKDLLTLAPHGAINVHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ A+ G+ ETG+ IM+MD+ LDTG V R + I + + L L+ L A+VEA
Sbjct: 120 IQWAVAEGERETGVTIMQMDEGLDTGDVLLQRALEIREDDTSETLAPRLAALGGEALVEA 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ LE + Q T A + K + R+ + A V + +R +P+PGA+ +
Sbjct: 180 LRLLEAGAIVPVRQDAAQATLARILEKEDGRIAWTSPARRVSDRLRGFTPWPGAFTTLEG 239
Query: 242 GNKHERIKLLESQLVEGEGKPGE---VINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDF 297
+ G+PGE V +AC G A+ + R+Q G D
Sbjct: 240 RTLKVLEARPGADAEAPAGEPGEAEVVPGRGLAVACGGGTALLVTRVQLEGRPAQSALDL 299
Query: 298 LLGCP 302
G
Sbjct: 300 ANGLR 304
>gi|319956194|ref|YP_004167457.1| methionyl-tRNA formyltransferase [Nitratifractor salsuginis DSM
16511]
gi|319418598|gb|ADV45708.1| methionyl-tRNA formyltransferase [Nitratifractor salsuginis DSM
16511]
Length = 313
Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 88/312 (28%), Positives = 142/312 (45%), Gaps = 14/312 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+RVVFMGT E+A L+ L+ + V TQP RP G R V A E +
Sbjct: 11 AIRVVFMGTPEYARRILERLLEEPGIEVSLVLTQPDRPVG-RKKILTPPPVKNLAHERGI 69
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P+ L +E ++ L A +VVA + + N HASLLP +RGA+
Sbjct: 70 EVLQPSSLREEPVQERLRAEAPDFIVVAAFGQLLPPEVLGIA-PCINLHASLLPAYRGAS 128
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q+A++ GD TG+ M M++ LDTGP R V I + L + L+ A
Sbjct: 129 PVQQALLQGDRYTGVTAMLMEEGLDTGPGLAYRYVLIDESTRLRELMERLTEAAAELTPR 188
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + ++ PQ ++ KI + + + A + RA +PG +L
Sbjct: 189 VLKRYDRL--QPLPQFGALASHCSKIRRADGEIT-LEEASEIRRKYRAFEGWPGVFLP-- 243
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ LE + +PGE++ + + CS+G VRI+RLQ +G + + +
Sbjct: 244 ---NGLKLLELEFPADDSTHRPGEILEIGEESIDVGCSRGRVRILRLQPSGKKEMSGRAY 300
Query: 298 LLGCPVIIGCIV 309
+G + G +
Sbjct: 301 CVGRGLKRGDSL 312
>gi|294102011|ref|YP_003553869.1| methionyl-tRNA formyltransferase [Aminobacterium colombiense DSM
12261]
gi|293616991|gb|ADE57145.1| methionyl-tRNA formyltransferase [Aminobacterium colombiense DSM
12261]
Length = 310
Score = 130 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 91/315 (28%), Positives = 156/315 (49%), Gaps = 15/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALV---SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
+++ F+GT FA L+ LV + + T P+ G RG+ S V + A + +
Sbjct: 1 MKIWFIGTGSFAAFCLEHLVSKCNMHFD--RIITGMPKRGG-RGMGERPSYVEETATKLN 57
Query: 60 LPALVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
KL ++E + + +VV +G + + L+ G N H S+LP++R
Sbjct: 58 RSVFRTDKLSKDEELKRVLLESPPHCVIVVDFGQKVQEPFLSTPLWGCLNIHPSILPQYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPIQRA+M G TG+ + ++ + +D GPV ++ I + + L Q L+ ++
Sbjct: 118 GAAPIQRALMDGQKATGVTVFRLVEEMDAGPVLGQTQIEIGPDETSGDLFQRLAEEGSNL 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ + + + Q +TYA KI K ET++++ A+ HN +RAL+P PGA++
Sbjct: 178 LKVVVKSCNEGTNITTLQNSKLVTYASKIEKRETQLSWSFDAQRFHNTVRALNPQPGAFI 237
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDI 294
R+K+ ++ + EG GKPGEV I N +A +GAV ++ +Q G RV
Sbjct: 238 FYKKR----RLKIWKTSVCEGTGKPGEVLGFIEGNPLVALQEGAVLLLEVQPEGRRVQSG 293
Query: 295 GDFLLGCPVIIGCIV 309
++ G + G
Sbjct: 294 SEWSRGIRLKKGDNF 308
>gi|124025755|ref|YP_001014871.1| putative methionyl-tRNA formyltransferase [Prochlorococcus marinus
str. NATL1A]
gi|166215497|sp|A2C296|FMT_PROM1 RecName: Full=Methionyl-tRNA formyltransferase
gi|123960823|gb|ABM75606.1| putative Methionyl-tRNA formyltransferase [Prochlorococcus marinus
str. NATL1A]
Length = 336
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 90/340 (26%), Positives = 145/340 (42%), Gaps = 37/340 (10%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VF GT ++A L+ +V + + +++V TQP R G RG K S V + A+E S+P
Sbjct: 1 MKIVFWGTPKYAAENLRTIVKAGYEVIAVVTQPDRKRG-RGKKLSPSPVKEAAEELSIPV 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ +++ + L+ ADV +VVA+G ++P+ IL+ LG +N HASLLP WRGAA
Sbjct: 60 YATHSISKDQKTKELLLNLKADVYLVVAFGQILPKEILDQPNLGCWNSHASLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL------- 173
PIQ +I+ D +TGI IM M++ LDTGPV I + N L LS +
Sbjct: 120 PIQWSIINADTKTGICIMSMEEGLDTGPVIEQESTIIKDSDNLEILTNRLSRMSSKLLLK 179
Query: 174 ---CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
L Q + + + + + +
Sbjct: 180 SLEKIKLTKGLNKSSRLKKLNAIDQTNLKGSPSYARQITKEDNLIDWNQDAKKIIKKIQG 239
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLVEGEGK----------------PGEV--INPNFTI 272
+P A+ +RIK+LE+ + + PGE+ IN I
Sbjct: 240 LYPNAYTFYNA----KRIKILEAIISSDNNQSKESQDIKNQSKTNRIPGEIIMINKQIGI 295
Query: 273 A--CSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ + I Q G + D + + I +G
Sbjct: 296 KLMTNDYPILIKYAQLEGKKATDSYTLSIQSNLSINDKLG 335
>gi|260435792|ref|ZP_05789762.1| methionyl-tRNA formyltransferase [Synechococcus sp. WH 8109]
gi|260413666|gb|EEX06962.1| methionyl-tRNA formyltransferase [Synechococcus sp. WH 8109]
Length = 351
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 95/338 (28%), Positives = 150/338 (44%), Gaps = 30/338 (8%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TL+++F GT +A+ TL AL + H+IV V TQP R G RG + V S V +A+E L
Sbjct: 13 TLKILFWGTPVYALPTLNALHDAGHTIVGVVTQPDRRRG-RGKQLVPSPVKARAEELGLR 71
Query: 62 ALVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ +++ + + AD +VVVA+G ++P+ +L LG +NGH SLLPRWRGA
Sbjct: 72 VFTPERIRRDDDCKAKLAALGADASVVVAFGQILPKDVLEQPPLGCWNGHGSLLPRWRGA 131
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
PIQ A++ GD ETG+ IM M++ LDTGPV ++ PI + L + LS L A MV
Sbjct: 132 GPIQWALLEGDQETGVGIMAMEEGLDTGPVLLEQRTPIQLLEPSNALAKRLSALTAELMV 191
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI---RALSPFPGAW 236
+AM +E + + + + + + G
Sbjct: 192 QAMPLVEAAGPGPEDERLARLNVRVQTEESTYARMLDKQDFQLDWSTPALSIHRKVMGLH 251
Query: 237 LEMMIGNKHERIKLLESQLV--------------------EGEGKPGEVINP----NFTI 272
+ +R+K+L ++ + G PG +++ +
Sbjct: 252 PGAFTQWQGKRLKVLRTEPLIERLQDQLSAEGRNLVGQWPTGGHPPGTILDVIEDLGLVV 311
Query: 273 ACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ S + I Q G L G +G
Sbjct: 312 SSSGCPLLIREAQLEGKARSTAPVLLQQLKATPGDRLG 349
>gi|217034718|ref|ZP_03440119.1| hypothetical protein HP9810_3g3 [Helicobacter pylori 98-10]
gi|216942801|gb|EEC22300.1| hypothetical protein HP9810_3g3 [Helicobacter pylori 98-10]
Length = 303
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 11/308 (3%)
Query: 5 VVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--SLP 61
+VFMGT FA L+ALV +V ++TQ +P G R + E ++P
Sbjct: 3 IVFMGTPGFAEVILRALVKDEEIKVVGLFTQMDKPFG-RKKELKAPETKTYILENHLNIP 61
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L + E + D VVVAYG ++P+ +L+ N HASLLP++RGA+P
Sbjct: 62 IFQPQSLKEPEVQILKDLKPDFIVVVAYGKILPKEVLSIA--PCINVHASLLPKYRGASP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I I+ D GI+ M MD LD+G + ++ L +L+ + A ++
Sbjct: 120 IHEMILNDDKTYGISTMLMDVGLDSGDILESASFLREDYLDLDALSLKLAHMGATLLLST 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ PQ ++ +KI+K + V F + + S + +
Sbjct: 180 LKNFSSITRK--PQDHAQASFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEIFLEN 234
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
K ++L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L G
Sbjct: 235 SLKLLGVELVENEKSHKEGEILEIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKDYLNGK 294
Query: 302 PVIIGCIV 309
+ G I+
Sbjct: 295 RLKAGGIL 302
>gi|15827204|ref|NP_301467.1| methionyl-tRNA formyltransferase [Mycobacterium leprae TN]
gi|221229682|ref|YP_002503098.1| methionyl-tRNA formyltransferase [Mycobacterium leprae Br4923]
gi|21542057|sp|Q9CCQ0|FMT_MYCLE RecName: Full=Methionyl-tRNA formyltransferase
gi|254789362|sp|B8ZUM6|FMT_MYCLB RecName: Full=Methionyl-tRNA formyltransferase
gi|13092752|emb|CAC30060.1| putative methionyl-tRNA formyltransferase [Mycobacterium leprae]
gi|219932789|emb|CAR70645.1| putative methionyl-tRNA formyltransferase [Mycobacterium leprae
Br4923]
Length = 318
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 92/314 (29%), Positives = 147/314 (46%), Gaps = 10/314 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M +R+VF GT E A+ L L+ S H +++V T+P +GRRG K S V ++A +
Sbjct: 1 MLVRLVFAGTPESALPALCRLIDSPRHDVIAVLTRPDAASGRRG-KPEPSPVAREALDRG 59
Query: 60 LPA-LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P + + + VVVAYG ++ +L G+ N H SLLP WRG
Sbjct: 60 IPLLRPARPNSPVFVSELSEWAPECCVVVAYGALLGSPLLAVPPRGWVNLHFSLLPAWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+Q AI AGD TG +++ LD+GPV + I L + L+V A +
Sbjct: 120 AAPVQAAIAAGDTITGATTFQIEPSLDSGPVYGVVTETIQPTDTAGDLLERLAVSGATLL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL- 237
+D + L Q +G+++A KI+ + RV + A V IRA++P PGAW
Sbjct: 180 SSTLDGIADAILTPRQQPVDGVSFAPKITVEQARVCWDLPAPVVERRIRAVTPNPGAWTL 239
Query: 238 --EMMIGNKHERIKLLESQLVE--GEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRV 291
++ + R ++ PG V + + I VR+ ++Q G +
Sbjct: 240 VGKLRVKLGPVRFDSGAVEVPRLLKPLLPGGIHVDHKSVWIGTGSDPVRLSKVQPQGKKF 299
Query: 292 LDIGDFLLGCPVII 305
++ D+ G +
Sbjct: 300 MNAVDWAHGARLDP 313
>gi|33861398|ref|NP_892959.1| putative methionyl-tRNA formyltransferase [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|39931214|sp|Q7TUA3|FMT_PROMP RecName: Full=Methionyl-tRNA formyltransferase
gi|33633975|emb|CAE19300.1| putative Methionyl-tRNA formyltransferase [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 328
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 92/327 (28%), Positives = 152/327 (46%), Gaps = 21/327 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E++V +L+ L S H IV+V TQP + RG K + S V + A + ++P
Sbjct: 1 MRIIFWGTPEYSVKSLEVLKKSDHDIVAVITQPDKKR-SRGNKLISSPVKEYATKENIPV 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + + D+ +V+AYG ++P+ IL+ K +N HASLLPRWRGAA
Sbjct: 60 FTPETIKENIQFISILNDLSCDLFIVIAYGKILPKAILDIPKYKSWNAHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ +I+ GD TG+ IM+M++ LDTG V +++ I +N N L ++LS L + +
Sbjct: 120 PIQWSILEGDKITGVGIMRMEEGLDTGDVLVEKQIKIENNDNLKTLTKKLSDLSSELFLR 179
Query: 181 AMDKLEQNNLPLS-----PQIENGITYAEKISKG--ETRVNFCRSAENVHNHIRALSPFP 233
A+ +EQN Q + + +N+ SA +++ I AL P
Sbjct: 180 AISDIEQNKNRDINLLLKKQTDFKRELKYARMINKLDYIINWENSATDIYRKINALYPRA 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGE-------GKPGEVI----NPNFTIACSQGAVRIM 282
+ + L ++ KPG +I N I + ++
Sbjct: 240 NTTYKRKNLKIIKIKILTTHEIHNKNYKILSNVFKPGLIIGLIKNVGIIITTKTDPILLL 299
Query: 283 RLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ G +V + +IG
Sbjct: 300 EAKLEGKKVSSQNQLIQQLNPVIGENF 326
>gi|283457828|ref|YP_003362426.1| methionyl-tRNA formyltransferase [Rothia mucilaginosa DY-18]
gi|283133841|dbj|BAI64606.1| methionyl-tRNA formyltransferase [Rothia mucilaginosa DY-18]
Length = 322
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 83/314 (26%), Positives = 140/314 (44%), Gaps = 20/314 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L +++ GT + AV L L +S +V V T+ P G R S V ++A+E LP
Sbjct: 2 LNIIYAGTPDVAVPPLDYLANSDKVRVVGVLTREDAPVG-RKRVLTPSPVAQRAEELGLP 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ + NAD A VVAYG ++P L + + G+ N H S LP WRGAAP
Sbjct: 61 IVKANRWNDAAAAAIAELNADAAAVVAYGALLPLPALESLRYGWVNLHFSKLPAWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRA++AG+ E +++ LDTGP P++++ + L+ +
Sbjct: 121 VQRALIAGEQEIFSTTFLLEEGLDTGPTFEQESTPVAADDTAGSVLMRLATSGGALLERT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++LE + ++YA K+S + R+ + AE + R ++P PGAW E+
Sbjct: 181 FERLEAGESGTVQVEDESVSYASKMSIADGRLTWTEPAEQILARFRGVTPEPGAWCELGE 240
Query: 242 GNKHERIKLLESQLVE------------GEGKPGEV--INPNFTIACSQGAVRIMRLQRA 287
R K+ + + G PG V + + ++++Q A
Sbjct: 241 N----RFKIGGLAVADERLVQSLTEANGGPLAPGAVRLHAKKVLVGTGTEPLMLLQVQPA 296
Query: 288 GGRVLDIGDFLLGC 301
G +++D + G
Sbjct: 297 GKKMMDAPAWARGA 310
>gi|225552428|ref|ZP_03773368.1| methionyl-tRNA formyltransferase [Borrelia sp. SV1]
gi|225371426|gb|EEH00856.1| methionyl-tRNA formyltransferase [Borrelia sp. SV1]
Length = 312
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 83/312 (26%), Positives = 147/312 (47%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ F+ +S A+ + +V + +V V T P +P G RG K + + +A ++
Sbjct: 1 MKIFFVSSSSIALEVFKEIVK-HYEVVGVLTLPDKPKG-RGQKLSQNVIKSEAIARNIKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L L N D+ +V +YG + + L+ G N H SLLP++RG +PI
Sbjct: 59 LDLLILNDNALNLVRGLNPDLMLVFSYGKIFKKEFLDLFPRGCINVHPSLLPKYRGVSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD +G+ I M +D+G + +K I S + + + +S L ++EA+
Sbjct: 119 QSAILNGDCVSGVTIQSMALEMDSGNILVQKKFKIRSYDTSHDISKLVSSLSPSLVLEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+K+ + L PQ + T+ + K ++F SA + N I A +P+P +
Sbjct: 179 EKISKGFL-GIPQKSSEATFCSFLKKESGFIDFNLSAFEIKNKINACNPWPLVRARLDYN 237
Query: 243 NK-HERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R LE L + K GE+++ + +G + ++ +QR G RVLD F
Sbjct: 238 DIIFHRADFLEVDLYKNR-KIGEIVDFNPEKGLFVNTGKGILLLLEVQRPGRRVLDFKSF 296
Query: 298 LLGCPVIIGCIV 309
G +IG +
Sbjct: 297 YNGSRQLIGQVF 308
>gi|303245829|ref|ZP_07332111.1| methionyl-tRNA formyltransferase [Desulfovibrio fructosovorans JJ]
gi|302492612|gb|EFL52480.1| methionyl-tRNA formyltransferase [Desulfovibrio fructosovorans JJ]
Length = 321
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 104/304 (34%), Positives = 156/304 (51%), Gaps = 11/304 (3%)
Query: 8 MGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MGT +FA L+ L+ S + +VYTQP RP G RG K + V + A E LP P
Sbjct: 1 MGTPQFAATVLEHLLESDDVRVAAVYTQPDRPCG-RGKKCHVGPVKELALEKGLPIHQPE 59
Query: 67 KLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
++ D+ VV AYG+++PQ +L+ +L N HASLLP WRGAAPI+RA
Sbjct: 60 SFRDPAAVDILAAYKPDILVVAAYGMILPQAVLDIPRLMPINVHASLLPAWRGAAPIERA 119
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
I AGD TG+ IM+M LD GP+ R + I + L+ EL+ L + + +L
Sbjct: 120 IAAGDQLTGVTIMRMVAALDAGPMIMQRALAIGAGDTAGELRAELADLGGRVLAHCLKRL 179
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKH 245
+P+ Q + +TYA+KI K E +++ R A VHN IRA++P PGA+
Sbjct: 180 RVGGVPMVEQDPDKVTYAKKIDKAEAFIDWSRPAREVHNLIRAMTPHPGAFFFWRPAPDK 239
Query: 246 ERIKLLESQ-----LVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++++ + KPG+++ + + +AC+ I + AG R +D F
Sbjct: 240 PALRIIAHPGKVGCPLPPGAKPGDILGVMDCHLGVACADAVYLIPTVVPAGKRPMDAQAF 299
Query: 298 LLGC 301
G
Sbjct: 300 SCGY 303
>gi|283852904|ref|ZP_06370165.1| methionyl-tRNA formyltransferase [Desulfovibrio sp. FW1012B]
gi|283571733|gb|EFC19732.1| methionyl-tRNA formyltransferase [Desulfovibrio sp. FW1012B]
Length = 325
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 106/310 (34%), Positives = 155/310 (50%), Gaps = 11/310 (3%)
Query: 8 MGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MGT EFA L+ ++ S ++ +VYTQP RP G RG K L V + A E LP P
Sbjct: 1 MGTPEFAATVLRHVLESDDVTVAAVYTQPDRPCG-RGKKCRLGPVKELALEKGLPVHQPE 59
Query: 67 KLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
++ DV +V AYG+++PQ +L+ N HASLLP WRGAAPI+RA
Sbjct: 60 TFKDPAEVATLAAYKPDVLIVAAYGMILPQAVLDVPTAMPINVHASLLPAWRGAAPIERA 119
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
+ AGD TG+ IM+M LD GP+ R + I N L+ EL+ L +V + +L
Sbjct: 120 VAAGDTMTGVTIMRMVAALDAGPMIMQRVLAIGVNDTAGMLRAELADLGGRVLVHCLKRL 179
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKH 245
+P+ Q +TYA+KI K E +++ R A VHN IRA++P PGA+
Sbjct: 180 RTGGVPMVEQDPARVTYAKKIEKSEAFIDWSRPAAEVHNLIRAMTPHPGAFFFWQQAPDK 239
Query: 246 ERIKLLESQ-----LVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++++ + PG+++ + + IAC+ I + AG R +D F
Sbjct: 240 PALRIIAHPGKVGCPLPPGACPGDILGIMDCHLAIACADAVYLIPTVVPAGKRPMDAKAF 299
Query: 298 LLGCPVIIGC 307
G G
Sbjct: 300 SCGYLGKCGD 309
>gi|297571429|ref|YP_003697203.1| methionyl-tRNA formyltransferase [Arcanobacterium haemolyticum DSM
20595]
gi|296931776|gb|ADH92584.1| methionyl-tRNA formyltransferase [Arcanobacterium haemolyticum DSM
20595]
Length = 308
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 96/308 (31%), Positives = 151/308 (49%), Gaps = 13/308 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT A+ +L L+ H +V+V T+ P P G R S VH++A++ LP
Sbjct: 1 MRIIFAGTPATAIPSLHRLMQ-DHEVVAVLTRAPAPVG-RKKVLTPSPVHQEAEKLGLPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L PT G+E EQ +F + VVAYGL+IP+ +L+ + G+ N H SLLPRWRGAAP
Sbjct: 59 LTPTSLRGEEIEEQLRAFAPEAIAVVAYGLLIPKNLLDLPQHGWLNLHYSLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A+ AGD TG + +++ LDTGP F + ++ L LS A +
Sbjct: 119 VQYAVAAGDTITGTCVFQIEAGLDTGP-IFDVEEHAVDGRSSGDLLNALSDSGAEQLARV 177
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
LEQ + +PQ + ++ ++F + A+ + IR P PG W +
Sbjct: 178 FAALEQGSAKSTPQEGEVTLAPQLSTRDSF-IDFSQPAKVIDAKIRGYYPEPGPWTYVEG 236
Query: 242 GNKHERIKLLESQLVEGEGKP-GEVI-NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+RIKL + + G P G V+ + + AV + + AG + + +
Sbjct: 237 ----QRIKLAPVTVTDETGIPAGRVVPGKHVKVGTGTTAVVLSDVTPAGKKTMAAEAWAR 292
Query: 300 GCPVIIGC 307
G + G
Sbjct: 293 G--LNDGD 298
>gi|322379233|ref|ZP_08053624.1| Fmt protein [Helicobacter suis HS1]
gi|322379694|ref|ZP_08054007.1| methionyl-tRNA formyltransferase [Helicobacter suis HS5]
gi|321147843|gb|EFX42430.1| methionyl-tRNA formyltransferase [Helicobacter suis HS5]
gi|321148373|gb|EFX42882.1| Fmt protein [Helicobacter suis HS1]
Length = 302
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 88/314 (28%), Positives = 149/314 (47%), Gaps = 20/314 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS--L 60
++++FMGT FA L L+ +V + TQP +P G R + SA QE +
Sbjct: 1 MKILFMGTPLFAQVVLAHLLEEGFEVVGLITQPSKPFG-RQQQMKDSATKVFIQEKQLPI 59
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P P K+ + + DV VVVAYG ++PQ +L + N H SLLP++RGA+
Sbjct: 60 PVFEPLKIDDLTLQTIQNLKPDVVVVVAYGKILPQSLL--NLVPCINLHGSLLPQFRGAS 117
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ I+ +E G++++KM +D G + M + N L L+ + A +
Sbjct: 118 PIQEMILHDLSEFGVSVIKMSAQMDAGDILGMDSFIKDRDYNAEELGTRLACMGARLVAR 177
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+++LE + PQ TY K E + SA+ V+ A +P+PG +L+
Sbjct: 178 VLNQLE--QITPIPQDHTKATY-CKKISKENGLVAFDSAKTVYLKSLAYTPWPGVFLKSG 234
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ KL +L+ + + GE++ + + C +G ++I LQ G + +
Sbjct: 235 L-------KLFGIELINTQDCHQEGEILALEGESVLVGCLRGVLKIATLQAPGKQKIAAK 287
Query: 296 DFLLGCPVIIGCIV 309
+L G + +G I+
Sbjct: 288 SYLSGKRLKVGEIL 301
>gi|269119798|ref|YP_003307975.1| methionyl-tRNA formyltransferase [Sebaldella termitidis ATCC 33386]
gi|268613676|gb|ACZ08044.1| methionyl-tRNA formyltransferase [Sebaldella termitidis ATCC 33386]
Length = 309
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 93/314 (29%), Positives = 167/314 (53%), Gaps = 13/314 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ +FMGT EFAV +L+ + ++ + +++T+ +P RG K +++ V + E ++
Sbjct: 1 MKTIFMGTPEFAVPSLEKVFETT-ELTAIFTKEDKP-NARGNKIIINPVKQFGIEHNIEI 58
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P K+ E + + + D+ VVVAYG ++P+ I+ K G N H+SLLP++RGA+P
Sbjct: 59 IQPRKMKDSELIKKIKDLDPDLIVVVAYGKILPREIIEIPKYGIINVHSSLLPKYRGASP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ ETG++IM +++ LD+G V M I+ L +L V+ A + +A
Sbjct: 119 IHSAILNGEKETGVSIMYIEEGLDSGDVILMESCEITETDTLGTLHDKLKVIGAELLGKA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ + SPQ T+ + I+K E ++++ R AE V+N +R L+PFPGA+
Sbjct: 179 ITLIEKEEVTSSPQDHTKATFVKPITKEEEKIDWSRPAEEVYNKVRGLNPFPGAYTTFKD 238
Query: 242 GNKHERIKLLESQ--LVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+K+ E++ E EG GE++ + G + + ++ G +
Sbjct: 239 T----VVKIYETEKDYEEYEGDFGEIVALKKKHGPVVKLRDGNLILKNVKLQGKKNQSGI 294
Query: 296 DFLLGCPVIIGCIV 309
D L G G
Sbjct: 295 DLLNGRVFQTGDKF 308
>gi|281357352|ref|ZP_06243841.1| methionyl-tRNA formyltransferase [Victivallis vadensis ATCC
BAA-548]
gi|281316383|gb|EFB00408.1| methionyl-tRNA formyltransferase [Victivallis vadensis ATCC
BAA-548]
Length = 317
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 92/311 (29%), Positives = 149/311 (47%), Gaps = 7/311 (2%)
Query: 5 VVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL-PA 62
+ F+G+ AV L+A+ ++ +V V TQ RPAG R K + V AQE L P
Sbjct: 7 IYFLGSGPIAVPILKAVAAAPGLRLVGVGTQLDRPAG-RNRKPTPTPVGAAAQELGLNPD 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
VP + N + +VV++G ++ +L ++ N HASLLPR+RGA+P+
Sbjct: 66 KVPNVNDPAFLASLRARNPAIVLVVSFGQILRAELLALPRVACVNIHASLLPRYRGASPV 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
+ I+ D ETG+ M M++ LDTG V +VP+ L+ +L ++ A +
Sbjct: 126 TQCILNRDAETGVCFMAMERGLDTGGVYSSLRVPLDHREYCDALEVKLGLIAAKVAPGTL 185
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ +L PQ + T KI K + ++N+ +S+ ++ +RA P+PGA+ M+
Sbjct: 186 WAIASGDLQPVPQDDTEATVCTKIKKADGKINWTKSSYDIEAMVRAYYPWPGAFCTMLTT 245
Query: 243 NKHERIKLLESQLV-EGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
I L + G PG V+ + IAC GA+ ++ L G R + FL
Sbjct: 246 RGESTITLTRVICRRDLGGTPGSVLQADKYALIIACGSGAIEVVELAPPGRRAMSAVAFL 305
Query: 299 LGCPVIIGCIV 309
G I+
Sbjct: 306 NGLRGEKPVIL 316
>gi|192359105|ref|YP_001984034.1| methionyl-tRNA formyltransferase [Cellvibrio japonicus Ueda107]
gi|190685270|gb|ACE82948.1| methionyl-tRNA formyltransferase [Cellvibrio japonicus Ueda107]
Length = 340
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 122/319 (38%), Positives = 174/319 (54%), Gaps = 11/319 (3%)
Query: 1 MT--LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M+ LR+VF GT +FA A L AL++S H ++ VY+QP RPAG RG K S V A
Sbjct: 19 MSQGLRIVFAGTPDFAAAHLHALLASRHQVIGVYSQPDRPAG-RGKKLTASPVKAVALAH 77
Query: 59 SLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP P E L DV VVVAYGL++P+ +L+A +LG N HASLLPRWR
Sbjct: 78 GLPVYQPLNFKAPESIDELRGLNADVMVVVAYGLILPKAVLDAPRLGCINVHASLLPRWR 137
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPIQRA+ AGD+ETG+ IM+MD LDTG + + PI + L L L A
Sbjct: 138 GAAPIQRALEAGDSETGVTIMQMDVGLDTGDMLVKARCPILPDDTGGSLHDRLITLGMPA 197
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
++EA+D+L+ + Q + YA K+SK E +++ +A + +RA +PFP A
Sbjct: 198 LLEALDQLQAGSAQPERQDDGLSNYAPKLSKEEAALDWRLAAVELERKVRAFNPFPVAHT 257
Query: 238 EMMIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+ +RI++ + V G PG + + +AC+QG + + +LQ G + +
Sbjct: 258 KPAGAGDDQRIRVWAATAVAGNTGAVPGTITRLDDQGLWVACAQGQLVLQQLQLPGKKAM 317
Query: 293 DIGDFLLGCP--VIIGCIV 309
+ D L G P G +
Sbjct: 318 AVSDILCGHPDLFRTGDPL 336
>gi|193215217|ref|YP_001996416.1| methionyl-tRNA formyltransferase [Chloroherpeton thalassium ATCC
35110]
gi|193088694|gb|ACF13969.1| methionyl-tRNA formyltransferase [Chloroherpeton thalassium ATCC
35110]
Length = 307
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 143/310 (46%), Gaps = 12/310 (3%)
Query: 8 MGTSEFAVATLQALV--SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
MGT F+V +L+ + S I V T P +P K + V A F LP
Sbjct: 1 MGTPHFSVPSLRKIAASDSGLQIKLVVTSPEKPRQSARSKPEPTPVKAVAMAFGLPVYEV 60
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
+ E+ Q ++ +VV V+P + A K+G +N HASLLP++RGAAPI +
Sbjct: 61 EDVKSPEFLQKINEIRPDVIVVVAFRVLPPEVFTAAKIGTFNLHASLLPKYRGAAPINWS 120
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
I+ GD+ETG+ + + +DTG + +K I + L LS + A++E + +
Sbjct: 121 IINGDSETGVTTFFIQQKVDTGNIILQKKTEIGEHETATELAVRLSEIGGDAVLETLQMI 180
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKH 245
+ + L Q T A K+ K TR+++ A+ V++ IR L+ P AW M
Sbjct: 181 QNGAVQLQVQDNALATKAPKLFKENTRIDWAAPAKKVNDMIRGLAERPTAWTTM----NG 236
Query: 246 ERIKLLESQLVEGE----GKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +K+ ++ E GE + + + C +G + + RLQ G + +++ FL
Sbjct: 237 KSVKIFQAAPCELSPVQALAAGEWLIQDGKLYVGCGEGVLDVKRLQFEGKKQMEVEVFLR 296
Query: 300 GCPVIIGCIV 309
G
Sbjct: 297 GFRPNGDERF 306
>gi|260903812|ref|ZP_05912134.1| methionyl-tRNA formyltransferase [Brevibacterium linens BL2]
Length = 319
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 94/311 (30%), Positives = 145/311 (46%), Gaps = 16/311 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VF GT + AV L+A V S H I ++ T+P P G R S V +A E L
Sbjct: 1 MDIVFAGTPDAAVPALEAFVESRHRIRALLTRPDAPVG-RKRVLTPSPVKARALELGLDV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ ++L E + + D VVAYG + L+ +LG++N H SLLP RGAAP+
Sbjct: 60 IEASRLRGEVIAELRALKVDAVAVVAYGAIAGPAALSTAELGWFNLHFSLLPAHRGAAPV 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRA++ G +G+++ ++D+ +D+GPV ++P+ L A +V A
Sbjct: 120 QRALIEGRQHSGVSVFRIDEGMDSGPVLRRLELPLDHPDVATALDDYAHKGAA-ELVAAF 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D LE L+PQ T+A+KI + ++F A+ + + R +SP PG W ++
Sbjct: 179 DDLEDGTAVLTPQSGE-ATHADKIGVDDAHLDFTEPAQAIIDRSRGVSPSPGPWADV--- 234
Query: 243 NKHERIKLLESQLVEGEGKPGEV-----INPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+R KL P EV + C G V + +Q G + DF
Sbjct: 235 -DEKRTKLFGLTPAPEVTDPPEVGLLTSWEKTAVLGCGDGWVHVAEIQPFGKARMAAVDF 293
Query: 298 LLGCPVIIGCI 308
L G G I
Sbjct: 294 LRGR----GDI 300
>gi|78212837|ref|YP_381616.1| methionyl-tRNA formyltransferase [Synechococcus sp. CC9605]
gi|123729729|sp|Q3AK21|FMT_SYNSC RecName: Full=Methionyl-tRNA formyltransferase
gi|78197296|gb|ABB35061.1| methionyl-tRNA formyltransferase [Synechococcus sp. CC9605]
Length = 338
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 98/337 (29%), Positives = 150/337 (44%), Gaps = 30/337 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ ++F GT +AV TL AL + H+IV V TQP R G RG + V S V +A+E LP
Sbjct: 1 MNILFWGTPAYAVPTLDALHGAGHTIVGVVTQPDRRRG-RGKQLVPSPVKARAEELGLPV 59
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ +++ + + AD +VVVA+G ++P+ +L LG +NGH SLLPRWRGA
Sbjct: 60 FTPERIRRDDDCKAKLAALGADASVVVAFGQILPKDVLEQPPLGSWNGHGSLLPRWRGAG 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ GD ETG+ IM M++ LDTGPV ++ PI + L + LS L A MV+
Sbjct: 120 PIQWALLEGDQETGVGIMAMEEGLDTGPVLLEQRTPIELLDTSIALAERLSALTAELMVQ 179
Query: 181 AMDKLEQNNLPLSPQ---IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
AM +E + N AE + + + + G
Sbjct: 180 AMPLIEAAGTGPEDERLAKLNVRVQAEGSTYARMLEKQDFQLDWSASALSIHRKVMGLHP 239
Query: 238 EMMIGNKHERIKLLESQLV--------------------EGEGKPGEVI----NPNFTIA 273
+R+K+L ++ + G PG ++ + ++
Sbjct: 240 GAFTQLHDKRLKVLRTEPLIERLQDQLSTEGRSLVGQWPTGGHPPGTILAMIEDLGLVVS 299
Query: 274 CSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
S + I Q G L +G G
Sbjct: 300 SSGCPLLIREAQLEGKARSTAPALLQQLKATLGDRFG 336
>gi|126696365|ref|YP_001091251.1| putative methionyl-tRNA formyltransferase [Prochlorococcus marinus
str. MIT 9301]
gi|126543408|gb|ABO17650.1| putative Methionyl-tRNA formyltransferase [Prochlorococcus marinus
str. MIT 9301]
Length = 346
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 86/324 (26%), Positives = 152/324 (46%), Gaps = 20/324 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E+++A+L + S H ++ V +QP + RG K + S V A++ S+
Sbjct: 1 MRIIFWGTPEYSIASLDIFIKSKHEVIGVVSQPDKKR-SRGNKLISSPVKSFAEQESIKI 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
PTK+ + S + D+ +V+AYG ++P+ IL K G +N HASLLPRWRGAA
Sbjct: 60 YTPTKIRDNIHFINELKSLSCDLFIVIAYGKILPKEILEIPKFGCWNAHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ +++ GD TG+ IMKM++ LDTG + K+ I ++ N L ++LS+L A +
Sbjct: 120 PIQWSLIKGDEFTGVGIMKMNEGLDTGDLLLEEKIKIDNDDNLNTLSEKLSILSAKLFLN 179
Query: 181 -----AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
+ + N L+ Q ++ + + + + +P A
Sbjct: 180 ATSLLEENIYKNTNWQLTKQNTLAREITYARMIEKSDFRVDWTNDAIKISQKIKGLYPRA 239
Query: 236 WLEMMIGN-KHERIKLLESQLVEGE-------GKPGEVI----NPNFTIACSQGAVRIMR 283
N + +IK+L S ++ + +PG ++ N I+ + ++
Sbjct: 240 NTTFRGKNLQILKIKVLTSDEIKNKNLITSNYSRPGIILSVIENEGIIISTKTDPIILLE 299
Query: 284 LQRAGGRVLDIGDFLLGCPVIIGC 307
+ G + + IG
Sbjct: 300 AKLEGKNISSKKQLIQQLKPTIGE 323
>gi|224003795|ref|XP_002291569.1| methionyl-trna formyltransferase [Thalassiosira pseudonana
CCMP1335]
gi|220973345|gb|EED91676.1| methionyl-trna formyltransferase [Thalassiosira pseudonana
CCMP1335]
Length = 337
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 79/321 (24%), Positives = 144/321 (44%), Gaps = 22/321 (6%)
Query: 4 RVVFMGTSEFAVATLQALVS------SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
RVVF+GT + A A+L+ + S + IV V TQP + +R K + S V A+E
Sbjct: 4 RVVFLGTPDVAAASLKTIYERSQDPSSCYEIVGVVTQPNKRRKKRSGKIIASPVGIVAEE 63
Query: 58 FSLPALVPTKLGQEEYEQ--FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+P L P K E+ D+ + AYG +P+R L K G N H SLLPR
Sbjct: 64 LGIPTLTPEKARDPEFLDELQNEVKPDLCITAAYGQYLPKRFLATPKFGTLNIHPSLLPR 123
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
WRG++P+QR++ AGDN G++++ +D GP+ + I ++ L L +
Sbjct: 124 WRGSSPVQRSLEAGDNPVGVSVLFTVSKMDAGPIVAQESLEIDADEQATTLLPRLFEIGT 183
Query: 176 HAMVEAMDKL---EQNNLPLSPQIEN---GITYAEKISKGETRVNFCRSAENVHNHIRAL 229
+++++ + E + Q E+ + + + ++
Sbjct: 184 QLLIDSIPSVTSGEITMDTATVQDESLVAEASMIDSSEGQLWPQKMTAVQCHNRVRGFSM 243
Query: 230 SPFPGAWLEMMIGNK-HERIKLLESQLVEGEGKPGEVIN------PNFTIACSQGA-VRI 281
P ++ + ++K+++S+++E + +P +VI I C G+ + +
Sbjct: 244 WPGCFLHFQIGDDDTEPVKVKVIKSRVLEEKMEPTDVIEIGQKKGDGLRIVCFDGSVLEM 303
Query: 282 MRLQRAGGRVLDIGDFLLGCP 302
+++Q A V+D F G
Sbjct: 304 LQVQPATRNVMDAKSFANGLQ 324
>gi|78184741|ref|YP_377176.1| methionyl-tRNA formyltransferase [Synechococcus sp. CC9902]
gi|123729937|sp|Q3AXQ4|FMT_SYNS9 RecName: Full=Methionyl-tRNA formyltransferase
gi|78169035|gb|ABB26132.1| methionyl-tRNA formyltransferase [Synechococcus sp. CC9902]
Length = 338
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 104/336 (30%), Positives = 164/336 (48%), Gaps = 30/336 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++++ GT E+AV TL AL ++ H IV V TQP R G RG + + SA+ AQ L
Sbjct: 1 MKILYWGTPEYAVPTLLALHAAGHEIVGVVTQPDRRRG-RGKQLMPSAIKVCAQSLGLAV 59
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ + Q NADV+VVVA+G ++P+ +L LG +NGH SLLPRWRGA
Sbjct: 60 FTPERIKTDVGCQKELADLNADVSVVVAFGQILPKSVLEQPPLGCWNGHGSLLPRWRGAG 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ GD+ETG+ IM M++ LDTGPV +++PIS + N+ L ++LS L A MVE
Sbjct: 120 PIQWALLEGDSETGVGIMAMEEGLDTGPVLLEQRLPISLDQNSHDLGEKLSQLTATLMVE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHN---HIRALSPFPGAWL 237
A+D + + + P+ + + + + + +R G +
Sbjct: 180 AVDLILKAGVGTEPERLERLNVRYQGQEMSYARMLKKEDFQIKWGDPALRTHRRVMGLYP 239
Query: 238 EMMIGNKHERIKLLESQLV--------------------EGEGKPGEVI----NPNFTIA 273
M G +++R+K+LE++ + GE PG V+ N ++
Sbjct: 240 SAMTGWRNKRLKVLETEPLIERLSDEISEEARALLGRWRTGEDHPGTVLGCINNVGIVVS 299
Query: 274 CSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
S + I Q G + +G
Sbjct: 300 TSGCPILIREAQLEGKGRCRAQGLVQQLAASVGDRF 335
>gi|90415407|ref|ZP_01223341.1| methionyl-tRNA formyltransferase [marine gamma proteobacterium
HTCC2207]
gi|90332730|gb|EAS47900.1| methionyl-tRNA formyltransferase [marine gamma proteobacterium
HTCC2207]
Length = 294
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 107/290 (36%), Positives = 161/290 (55%), Gaps = 12/290 (4%)
Query: 28 IVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNA-DVAVV 86
++ VY+QP R AG RG K S V K A E+ LP P L + E ++ LS D+ VV
Sbjct: 9 VIGVYSQPDRSAG-RGKKLTASPVKKLAVEYQLPVFQPQSLKEPEQQRILSELQADIMVV 67
Query: 87 VAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDT 146
VAYGL++PQ +L+A +LG N HAS+LPRWRGAAPIQRAI AGD+ TG+ IM+MD LDT
Sbjct: 68 VAYGLILPQAVLDAPRLGCINVHASILPRWRGAAPIQRAIEAGDSGTGVTIMQMDAGLDT 127
Query: 147 GPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKI 206
G + + + I S+ +A L Q+L L A A++ + L Q + YA KI
Sbjct: 128 GAMLSVSRCEIDSSETSASLHQKLEQLGAPALLHTLAALSNGLAVAVEQDDQLSCYAAKI 187
Query: 207 SKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEG-KPGEV 265
+K E V++ + A+ + IRA +PFP A+ + RIK+ +++ + G PG++
Sbjct: 188 TKQEALVDWSQPAQLLDRQIRAFNPFPAAYTTLGE----LRIKIWQAEPTKATGLTPGQI 243
Query: 266 I---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL--LGCPVIIGCIVG 310
I N ++C + ++ + +Q G + + + L G +G
Sbjct: 244 ISTDNAGLLVSCGEQSLLLTEIQLPGKSRMAVSEVLKSRGELFAPSTQLG 293
>gi|224534890|ref|ZP_03675459.1| methionyl-tRNA formyltransferase [Borrelia spielmanii A14S]
gi|224513830|gb|EEF84155.1| methionyl-tRNA formyltransferase [Borrelia spielmanii A14S]
Length = 317
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 81/313 (25%), Positives = 146/313 (46%), Gaps = 10/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ F+ +S A+ + +V + +V V T P +P G RG K + + +A ++
Sbjct: 1 MKIFFVSSSSIALEVFKEIV-RHYEVVGVLTLPDKPKG-RGQKLSQNVIKLEAISKNIKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L N D+ +V +YG + + L+ G N H SLLP++RG +PI
Sbjct: 59 FDSLVLDDNTLSLIKDLNPDLMLVFSYGKIFKKEFLDIFPRGCINIHPSLLPKYRGVSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD +GI + M +D+G + + I S + + + +S L ++EA+
Sbjct: 119 QSAILNGDCVSGITVQSMALEMDSGNILVQKNFKIKSYDTSYDISKLVSNLSPRLVLEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+K+ + L PQ + T+ K ++F SA + N I A +P+P A ++
Sbjct: 179 EKIGKGFL-GIPQKSSEATFCSFFKKESGFIDFNLSAFEIKNRINACNPWPLARARLLDY 237
Query: 243 NK--HERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
R L+ L + + K GE+++ + +G + ++ +QR G RVLD
Sbjct: 238 GDIIFHRADFLKIDLYKEK-KVGEIVDFDPEKGLFVNTGEGILLLLEIQRPGRRVLDYKS 296
Query: 297 FLLGCPVIIGCIV 309
F G +IG +
Sbjct: 297 FYNGSRQLIGHVF 309
>gi|315453863|ref|YP_004074133.1| methionyl-tRNA formyltransferase [Helicobacter felis ATCC 49179]
gi|315132915|emb|CBY83543.1| methionyl-tRNA formyltransferase [Helicobacter felis ATCC 49179]
Length = 300
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 91/314 (28%), Positives = 145/314 (46%), Gaps = 22/314 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--SL 60
+R+VFMGT FA L L+ I++++TQP +P G R + +A + Q +
Sbjct: 1 MRLVFMGTPPFAQIVLSHLLDEKFEILALFTQPSKPFG-RQKELKHAATKEFLQSVRPDI 59
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P P KL + + D +VVAYG ++PQ L N H SLLP++RGA+
Sbjct: 60 PIFEPKKLDDSTWHTLHTLKPDAIIVVAYGKILPQSFL--DLAPCLNLHGSLLPQFRGAS 117
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q I+ G++++KM +D G + + + QEL + A +
Sbjct: 118 PMQEMILNDLPTFGVSVIKMSSQMDAGDILGS----ACLHRDRYVNVQELGAMLAPLGAK 173
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + L PQ + TY KI+K V+F SA+ V A P+PG +L
Sbjct: 174 LLADILRRPLKPIPQDHSQATYCTKITKQAGLVDFT-SAKRVFLKSLAYYPWPGIFLASG 232
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ KLL+ +L+E E PG ++ + C+QG ++I LQ G L
Sbjct: 233 L-------KLLDVELIETEKVHTPGHILALEGEAVFVGCAQGTLKIASLQAPGKARLSAK 285
Query: 296 DFLLGCPVIIGCIV 309
+L G + G I+
Sbjct: 286 TYLSGKRLKPGAIL 299
>gi|260890451|ref|ZP_05901714.1| hypothetical protein GCWU000323_01621 [Leptotrichia hofstadii
F0254]
gi|260859693|gb|EEX74193.1| methionyl-tRNA formyltransferase [Leptotrichia hofstadii F0254]
Length = 321
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 87/316 (27%), Positives = 161/316 (50%), Gaps = 14/316 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP- 61
++ +FMGT EFA+ +L+ + ++ + ++T+ + RG K + S V + + +
Sbjct: 1 MKTIFMGTPEFAIPSLEVVFKNT-DLQLIFTKEDK-INARGNKIIFSPVKQFGIDNDVEI 58
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+E + N D+ VVVAYG ++P+ I++ K G N H+SLLP++RGA+P
Sbjct: 59 VQPKKMKDEEVINKIKEINPDLIVVVAYGKILPKEIIDIPKYGIINVHSSLLPKYRGASP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD ETG++IM +++ LD+G V I+ + L +L L A + +A
Sbjct: 119 IHSAILNGDTETGVSIMYIEEGLDSGDVILKEYCEITEDDTLGTLHDKLKDLGAAGLEKA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E + Q ++ T + I+K + ++++ + E ++N IR L+PFP A
Sbjct: 179 LKLIENGEVQAEKQDDSKATLVKPITKEQAKIDWNNTKEVIYNQIRGLNPFPTAHT---S 235
Query: 242 GNKHERIKLLESQLVEG-------EGKPGEVI-NPNFTIACSQGAVRIMRLQRAGGRVLD 293
K E IK+ +S+ +E G E+I + + G + I+ + G ++
Sbjct: 236 NEKGENIKIYKSEKIEKKYEDEIENGTIVEIINKKGPVVKVANGGILILEAKFEGKKLQK 295
Query: 294 IGDFLLGCPVIIGCIV 309
D + G ++IG +
Sbjct: 296 GVDIINGRKMVIGEKL 311
>gi|254525502|ref|ZP_05137554.1| methionyl-tRNA formyltransferase [Prochlorococcus marinus str. MIT
9202]
gi|221536926|gb|EEE39379.1| methionyl-tRNA formyltransferase [Prochlorococcus marinus str. MIT
9202]
Length = 328
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 91/327 (27%), Positives = 153/327 (46%), Gaps = 21/327 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT ++++++L L+ S+H +++V +QP + RG K + S + A++ S+
Sbjct: 1 MRIIFWGTPDYSISSLDILIKSNHDVIAVVSQPDKKR-SRGNKLIASPIKSFAEQESIKI 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ S + D+ +V+AYG ++P+ IL K G +N HASLLPRWRGAA
Sbjct: 60 YTPEKIRNNIPFINELKSLSCDLFIVIAYGKILPKEILEIPKFGCWNAHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ ++M GD TG+ IMKM + LDTG + K+ I +N N L ++LS+L A ++
Sbjct: 120 PIQWSLMKGDEYTGVGIMKMSEGLDTGDLLLEEKIKIDNNDNLNTLTEKLSILSAKLLLN 179
Query: 181 AMDKLEQNNLPLS-----PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
A+ LE N Q G ++ E + + + +P A
Sbjct: 180 AVSFLENNINKKINSQLAKQNTLGREITYARMIEKSDFKVNWGDEAIKISRKIKALYPRA 239
Query: 236 WLEMMIGN-KHERIKLLESQLVEGE--------GKPGEVI----NPNFTIACSQGAVRIM 282
N K +IK+L S ++ KPG +I N I+ + ++
Sbjct: 240 NTNFRGKNLKILKIKVLSSDEIKNAKYHLMSNYSKPGIIIAVIENEGIIISTKTDPIILL 299
Query: 283 RLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ G + + +G
Sbjct: 300 EAKIEGKNISTKKQLIQQLKPSVGEYF 326
>gi|308183245|ref|YP_003927372.1| methionyl-tRNA formyltransferase [Helicobacter pylori PeCan4]
gi|308065430|gb|ADO07322.1| methionyl-tRNA formyltransferase [Helicobacter pylori PeCan4]
Length = 303
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 85/310 (27%), Positives = 139/310 (44%), Gaps = 11/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+ +VFMGT FA L+ALV +V ++TQ +P G R + + E +
Sbjct: 1 MHIVFMGTPGFAEVILRALVGDKDTEVVGLFTQMDKPFG-RKKELKVPETKTYILENHLN 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P P L E + D VVVAYG ++P+ +L N HASLLP++RGA
Sbjct: 60 IPIFQPQSLKDPEVQILKDLKPDFIVVVAYGKILPKEVLTIA--PCINAHASLLPKYRGA 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI I+ D GI+ M MD LD+G + ++ L +L+ + A ++
Sbjct: 118 SPIHEMILNDDKIYGISTMLMDVGLDSGDILESASFLREEYLDLETLSSKLAHMGAALLL 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ PQ ++ +KI+K + V F + + S + +
Sbjct: 178 STLKNFSSITRK--PQDHAQASFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEIFL 232
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K ++L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L
Sbjct: 233 ENSLKLLGVELVENEKSHKEGEILEIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKDYLN 292
Query: 300 GCPVIIGCIV 309
G + G I+
Sbjct: 293 GKRLKAGGIL 302
>gi|257124972|ref|YP_003163086.1| methionyl-tRNA formyltransferase [Leptotrichia buccalis C-1013-b]
gi|257048911|gb|ACV38095.1| methionyl-tRNA formyltransferase [Leptotrichia buccalis C-1013-b]
Length = 316
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 89/320 (27%), Positives = 165/320 (51%), Gaps = 18/320 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ +FMGT EFA+ +L+ + ++ + ++T+ + RG K + S V + + +
Sbjct: 1 MKTIFMGTPEFAIPSLEVVFKNT-DLQLIFTKEDK-INARGNKIIFSPVKQFGIDNDIEI 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P K+ EE + N D+ VVVAYG ++P+ I++ K G N H+SLLP++RGA+P
Sbjct: 59 IQPKKMKDEEVINKIKEINPDLIVVVAYGKILPKEIIDIPKYGIINVHSSLLPKYRGASP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD ETG++IM +++ LD+G V I+ + L +L L A + +A
Sbjct: 119 IHSAILNGDTETGVSIMYIEEGLDSGDVILKEYCEITEDDTLGTLHDKLKDLGAAGLTKA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E + Q ++ T + I+K + ++++ + E ++N IR L+PFP A
Sbjct: 179 LKLIENGEVQAEKQDDSKATLVKPITKEQAKIDWNSTKEVIYNQIRGLNPFPAAHT---S 235
Query: 242 GNKHERIKLLESQLVEGE-----------GKPGEVI-NPNFTIACSQGAVRIMRLQRAGG 289
K E IK+ +S+ ++ G E+I + + G + I+ + G
Sbjct: 236 NEKGENIKIYKSEKIDKNYKDENETEIENGTIVEIINKKGPVVKVANGGILILEAKFEGK 295
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
++ D + G ++IG +
Sbjct: 296 KLQKGVDIINGRKMVIGEKL 315
>gi|227872148|ref|ZP_03990518.1| methionyl-tRNA formyltransferase [Oribacterium sinus F0268]
gi|227842006|gb|EEJ52266.1| methionyl-tRNA formyltransferase [Oribacterium sinus F0268]
Length = 332
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 38/331 (11%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT +FAV L+A+ + H I+ V +Q + R+G + + V + A+ LP +
Sbjct: 1 MGTPDFAVKGLEAIHQAGHEILLVISQEDKAKDRKG-NLLKTPVKQAAERLELPVRSVHR 59
Query: 68 LGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
L ++E D VV A+G ++P+ +L + G N HASLLP +RGA+PIQ+A
Sbjct: 60 LRKDEELLAYLKELKPDCIVVAAFGQILPKELLELPRYGCVNIHASLLPLYRGASPIQQA 119
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
I+ D ETGI+ M M + LDTG + +K+P++ L + LS+L ++E + L
Sbjct: 120 ILHRDKETGISTMLMAEGLDTGDILLQKKLPLTGEETGESLFEALSLLSQDCILETLSLL 179
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKH 245
EQ N P Q E ++ I K + VN+ + A + +RA +P+P A + G
Sbjct: 180 EQGNCPRRAQEEEKASHCSMIVKQDGFVNWNKPAIEIEAMVRAFNPWPAAVSILPNGKSF 239
Query: 246 ERIK--------------------LLESQLVEG-EGKPGEVI--------------NPNF 270
+ K LL + L E + EV N
Sbjct: 240 KIWKARVIRQKEEDFQSFSEIKEDLLFAHLPESLSEEAKEVFRKKDGIGKMYRNKENNRL 299
Query: 271 TIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
++ +G + I+ +Q G + LD FLLG
Sbjct: 300 LLSTGEGYLEILEIQVEGKKRLDTPAFLLGF 330
>gi|21672743|ref|NP_660810.1| methionyl-tRNA formyltransferase [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25008447|sp|Q8K974|FMT_BUCAP RecName: Full=Methionyl-tRNA formyltransferase
gi|21623389|gb|AAM68021.1| methionyl-tRNA formyltransferase [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 314
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 89/303 (29%), Positives = 162/303 (53%), Gaps = 15/303 (4%)
Query: 3 LR---VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
++ ++F GT+ F++ L AL S H +++V TQP RP+G RG K + S V + + +
Sbjct: 1 MKKLTIIFAGTAYFSMRYLDALTKSEHKVIAVITQPDRPSG-RGQKIIFSPVKILSIKRN 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P++ ++ + + NAD+ +VV+YG +IP+ IL G N H SLLPRWRG
Sbjct: 60 IPIFQPSELKNEKIQREIFNLNADMMIVVSYGKLIPKEILTMFPKGCINVHTSLLPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A PIQ AI+ GD ETGI+I+KM++ +D G + K I N T L +L + +
Sbjct: 120 ATPIQSAILFGDKETGISIIKMNEKMDAGTIINSVKCNILPNDTTETLTFKLIEIGIQVL 179
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
++ + + +N + Q E T+++KISK + +N+ A + IRA +P+P +
Sbjct: 180 LKTLYYINKNIVVEKEQNEKHATFSKKISKKDALLNWNTEAYLLERLIRAFNPWPVCYFI 239
Query: 239 MMIGNKHERIKLLESQLVEG---EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+ I++ +++++ GE++ I + + + ++Q G +++
Sbjct: 240 V----NQIAIRVWQAKIIPTVMKSACVGEIVAFNKNGIQINTAHQILNLQKIQFPGKKII 295
Query: 293 DIG 295
++
Sbjct: 296 NVE 298
>gi|42520701|ref|NP_966616.1| methionyl-tRNA formyltransferase [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|73919427|sp|Q73GR6|FMT_WOLPM RecName: Full=Methionyl-tRNA formyltransferase
gi|42410441|gb|AAS14550.1| methionyl-tRNA formyltransferase [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 299
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 96/301 (31%), Positives = 152/301 (50%), Gaps = 12/301 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMG+ FAV +L L+ S +V+VYT+ P+P+G RG K S VH A+E ++
Sbjct: 1 MRIIFMGSPGFAVNSLSLLLKSKSEVVAVYTKAPKPSG-RGQKPTKSPVHVIAEESNIEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E E+F +F DVAVV AYGL++P+ ILN K G N H SLLPRWRGAAP
Sbjct: 60 CTPISLKFSAEQEKFRNFKPDVAVVAAYGLILPREILNIPKYGCINIHPSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ I+AGD ETG++IM++D+ LD+G + I + L + +
Sbjct: 120 IQHTILAGDQETGVSIMQLDEGLDSGTILKQ----EKFLIEKNDNYKTLHDKLSKLGSDL 175
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ K+ P +N + ++ + E + ++A P + I
Sbjct: 176 LLKVLNEIEKQLPLKQNDNDACYADKVEDYKIYASDACEVAYRKVKAFYP------KAFI 229
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+++RI++L++ + G+++N N I+ G + +Q G I DF+ G
Sbjct: 230 KIENKRIRILDADFEALASEQGKIVNDNMHISLKGGTLIPKVVQMEGRNPCSIEDFIRGL 289
Query: 302 P 302
Sbjct: 290 K 290
>gi|78779343|ref|YP_397455.1| methionyl-tRNA formyltransferase [Prochlorococcus marinus str. MIT
9312]
gi|123727886|sp|Q31AS6|FMT_PROM9 RecName: Full=Methionyl-tRNA formyltransferase
gi|78712842|gb|ABB50019.1| methionyl-tRNA formyltransferase [Prochlorococcus marinus str. MIT
9312]
Length = 328
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 90/327 (27%), Positives = 152/327 (46%), Gaps = 21/327 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E+++++L + S H +++V +QP + RG K + S V A++ S+
Sbjct: 1 MRIIFWGTPEYSISSLDIFIKSKHEVIAVVSQPDKKR-SRGKKLISSPVKSFAEQESIKI 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ S + D+ +V+AYG ++P+ IL K G +N HASLLPRWRGAA
Sbjct: 60 YTPEKIRDNINFINELKSLSCDLFIVIAYGKILPKEILEIPKFGCWNAHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ ++M GD TG+ IMKM++ LDTG + K+ I +N N L ++LS+L A +
Sbjct: 120 PIQWSLMKGDEFTGVGIMKMNEGLDTGDLLLEEKIKIDNNDNLITLTEKLSILSAKLFLN 179
Query: 181 -----AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
+ + N L+ Q G ++ E + + + +P A
Sbjct: 180 ATSLLEENINKNTNYQLTKQNTLGREITYARMIEKSDYKVDWGNEAIKISRKIKALYPRA 239
Query: 236 WLEMMIGN-KHERIKLLESQLVEGE--------GKPGEVI----NPNFTIACSQGAVRIM 282
N K +IK+L S + E KPG ++ N I+ + ++
Sbjct: 240 NTTFRGKNLKIIKIKVLSSDEINNEKYCLMSNYSKPGIILAVLENEGIIISTKTDPIILL 299
Query: 283 RLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ G + + +G +
Sbjct: 300 EAKLEGKNISSKKQLIQQLKPSLGEYL 326
>gi|50954785|ref|YP_062073.1| methionyl-tRNA formyltransferase [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|71648674|sp|Q6AF77|FMT_LEIXX RecName: Full=Methionyl-tRNA formyltransferase
gi|50951267|gb|AAT88968.1| methionyl-tRNA formyltransferase [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 302
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 91/302 (30%), Positives = 144/302 (47%), Gaps = 10/302 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT AV +L AL ++ + +V T+ P G R S V A+E L
Sbjct: 1 MRLVFAGTPAVAVPSLTAL-AARFEVAAVITREDAPLG-RKRILTPSPVAIAAEELGLSV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ +L +E E+ DV VVVAYG ++ + +L+ + G+ N H SLLPRWRGAAP+
Sbjct: 59 IRANRLREEAIERVRVLRPDVGVVVAYGGLVHEPLLSLPRRGWVNLHFSLLPRWRGAAPV 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q A++AGD ETG A+ ++ LD G V + I + L +L+ A + + +
Sbjct: 119 QHALIAGDRETGAAVFQLVPELDAGDVFGELRRLIRPDETAGELLDDLARSGARLLADTV 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
L +PQ + + ++ R A+ V+ R ++P PGAW +
Sbjct: 179 AALADGTAVATPQSGEPVAAPKLGIADAK-LDLTRPADEVYARFRGVTPEPGAWALL--- 234
Query: 243 NKHERIKLLESQL-VEGEGKPGEVINPNFTIACSQGA--VRIMRLQRAGGRVLDIGDFLL 299
ER K+ + G PG V+ I G+ + ++ +Q AG RV+ D+
Sbjct: 235 -DGERFKIHAVRPTAAGVLPPGAVVADGKRILAGTGSRPLELVTVQPAGKRVMAAADWWR 293
Query: 300 GC 301
G
Sbjct: 294 GA 295
>gi|123968561|ref|YP_001009419.1| putative methionyl-tRNA formyltransferase [Prochlorococcus marinus
str. AS9601]
gi|166215499|sp|A2BRA1|FMT_PROMS RecName: Full=Methionyl-tRNA formyltransferase
gi|123198671|gb|ABM70312.1| putative Methionyl-tRNA formyltransferase [Prochlorococcus marinus
str. AS9601]
Length = 328
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 88/327 (26%), Positives = 153/327 (46%), Gaps = 21/327 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E+++A+L + S H ++ V +QP + RG K + S V A++ S+
Sbjct: 1 MRIIFWGTPEYSIASLDIFIKSKHEVIGVVSQPDKKR-SRGNKLISSPVKSFAEQESIKI 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ + S + D+ +V+AYG ++P+ IL K G +N HASLLPRWRGAA
Sbjct: 60 YTPVKIRDNIHFINELKSLSCDLFIVIAYGKILPKEILEIPKFGCWNAHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ +++ GD TG+ IMKM++ LDTG + K+ I + N L ++LS+L A ++
Sbjct: 120 PIQWSLIKGDKFTGVGIMKMNEGLDTGDLLLEEKIKIGNEDNLNTLSEKLSILSAKLFLK 179
Query: 181 AMDKLEQNNLPL-----SPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
A LE+N + Q G ++ + + + +P A
Sbjct: 180 AASLLEENFYKNTKSQLTKQNSLGREITYARMIEKSDFRVDWGNQAIAISQKIKGLYPRA 239
Query: 236 WLEMMIGN-KHERIKLLESQLVEGE--------GKPGEVI----NPNFTIACSQGAVRIM 282
N K +IK+L S ++ E +PG ++ + I+ + ++
Sbjct: 240 NTIFRGKNLKILKIKVLSSDEIKNEKYLFMSDYSRPGIILAVIEDEGIIISTKTDPIILL 299
Query: 283 RLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ G + + +G +
Sbjct: 300 EAKLEGKNISSKKQLIQQLKPSVGEYL 326
>gi|302782279|ref|XP_002972913.1| hypothetical protein SELMODRAFT_173020 [Selaginella moellendorffii]
gi|300159514|gb|EFJ26134.1| hypothetical protein SELMODRAFT_173020 [Selaginella moellendorffii]
Length = 366
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 94/320 (29%), Positives = 143/320 (44%), Gaps = 23/320 (7%)
Query: 4 RVVFMGTSEFAVATLQALVS------SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
R+VF+GT E A L +L+ S I + TQPP G RG K + S V ++A +
Sbjct: 35 RLVFLGTPEPAAKVLDSLLDAAAAKDSKFEIAGIVTQPPAARG-RGKKQMPSLVAQRALD 93
Query: 58 FSLPALVPTKLGQEEYEQFLSF----NADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P + + FL D+ V AYG ++ Q+ L+ K G N H SLL
Sbjct: 94 RQFPPHLIFSPEKASERCFLEELKSLEPDLCVTAAYGNILSQKFLDIPKHGTVNVHPSLL 153
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
P +RGAAP+QRAI G TG+++ + LD+GPV V + NI LQ L
Sbjct: 154 PLYRGAAPVQRAIQDGVKVTGVSVAYTVRALDSGPVVASESVEVDENIKAPELQDLLFSK 213
Query: 174 CAHAMVEAMDKLEQNNLPLS--PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
++ M L Q + T+A KI E ++F A +HN +RA S
Sbjct: 214 GTCLLLREMPHLLDGTGRSRATEQDHSRATHAPKIGVEEAWLSFEEPAAIIHNKVRAFSE 273
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEG----EGKPGE---VINPN-FTIACSQ-GAVRIM 282
+PG + + + ++R +LE ++V G P ++ + C + I+
Sbjct: 274 WPGTKAKFHLSSSNDRE-ILEMKIVTTRVCQSGFPSTRSILLKAGSMLVECGDHSWLEIL 332
Query: 283 RLQRAGGRVLDIGDFLLGCP 302
+Q G +V+ DF G
Sbjct: 333 EVQPPGRKVMKARDFWNGLQ 352
>gi|257063704|ref|YP_003143376.1| methionyl-tRNA formyltransferase [Slackia heliotrinireducens DSM
20476]
gi|256791357|gb|ACV22027.1| methionyl-tRNA formyltransferase [Slackia heliotrinireducens DSM
20476]
Length = 307
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 92/298 (30%), Positives = 141/298 (47%), Gaps = 6/298 (2%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT FA L L H +V VYT+ G RG V S + A E +P P
Sbjct: 1 MGTPTFAANILIEL-KEQHDVVCVYTRADAVRG-RGKALVPSPAKQVALEAGIPVREPDT 58
Query: 68 LGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
L + FL D VV AYG ++P+ +L+ G N H SLLP++RGAAP++RAI
Sbjct: 59 LRDPKEIAFLKELAPDAIVVAAYGKILPKEVLDIPPFGCINVHGSLLPKYRGAAPMERAI 118
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ G+ ETG+ IM+M++ LDTG R I L EL+ A+A++ A+ +E
Sbjct: 119 LDGEAETGVCIMRMEEGLDTGDYCISRSCEIGDQKLEH-LAGELADKGAYALLTALYAIE 177
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
Q + Q ++ TYAEK+ E ++ SA ++A S + ++
Sbjct: 178 QGEARWTKQDDSQATYAEKLGHDELMLDPADSAVMNARRVQASSDAHPSKCQLAGRGVTV 237
Query: 247 RIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+ + E +PG+V N + CS GA+R++ ++ G + + F G
Sbjct: 238 LDARVAAGEDAPELEPGQVALQAKNLYMGCSDGAIRLIEVKPDGKKAMSAASFAAGIQ 295
>gi|304394815|ref|ZP_07376713.1| 10-formyltetrahydrofolate dehydrogenase [Ahrensia sp. R2A130]
gi|303293114|gb|EFL87516.1| 10-formyltetrahydrofolate dehydrogenase [Ahrensia sp. R2A130]
Length = 305
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 74/314 (23%), Positives = 131/314 (41%), Gaps = 16/314 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R++ MG F L L+ + +V+VY +P R G + + + A E LP
Sbjct: 1 MRLIIMGQQAFGKDALAKLLEAGTDEVVAVYCEPDR----HGK--PVDPIKEFALEKGLP 54
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E L D+ V+ + +P+ + G H SLLP RG +
Sbjct: 55 VHQPAHFKDDETLDTLKDLNADLMVMAFVNVFVPEAARDTPTHGSICFHPSLLPLHRGPS 114
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV- 179
+ I+ G E+G + LD G V + PI + L + A A V
Sbjct: 115 AVNWPIIMGRKESGYSWFYPTDGLDEGDVLLSWECPIEPDDTVINLYFKKIYPSAVASVL 174
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +D N P Q E+ TY + + +++ + V+N IR +P PGAW
Sbjct: 175 QVVDLYRDGNPPHMVQDESQATYERRCTAKHAAIDWNKPVGQVYNLIRGCNPAPGAWTT- 233
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ ++ + +S + G+G ++++ T+ C G + I R++ GG D
Sbjct: 234 ---HGGAKLGVFDSARLPGDGVSSKIVDMNDDGITVQCIGGRILIKRVRPDGGDKQFAND 290
Query: 297 FLLGCPVIIGCIVG 310
+ + + +G I+G
Sbjct: 291 WAVSVGLAVGDILG 304
>gi|282856365|ref|ZP_06265644.1| methionyl-tRNA formyltransferase [Pyramidobacter piscolens W5455]
gi|282585736|gb|EFB91025.1| methionyl-tRNA formyltransferase [Pyramidobacter piscolens W5455]
Length = 310
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 94/314 (29%), Positives = 155/314 (49%), Gaps = 11/314 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++ F GT FA L+ ++S V T PP AG RGLK+ V + A + L
Sbjct: 1 MTAKIWFFGTGGFAARCLEE-IASKLRPQLVVTAPPSVAG-RGLKTRSMPVEESALKLEL 58
Query: 61 PALVP--TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
P +E + S + +V+ +G I + L+ + G N H SLLPR+RG
Sbjct: 59 PLRHAAAVNRDEELIRLYESEKPALILVIDFGQKIGEPWLSGPRCGCINIHPSLLPRYRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+QRA+M G+ E G+++ ++ + +D GPV + + N GL + ++V A
Sbjct: 119 AAPVQRALMNGETEAGVSLFRLVEKMDAGPVWLQGRCAVDPEENAGGLLERMAVAGARLF 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
E + L L+PQ E T A KI K E R++ A +H+ +R L P PGA++
Sbjct: 179 TENVASLLDGTAALTPQDEALATVAAKIGKSEARLDLALGARKLHDLVRGLCPVPGAYVT 238
Query: 239 MMIGNKHERIKLLESQLVE-GEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
R+K+LE+++ + + GE+ + + QGA+ ++ +Q G + + G
Sbjct: 239 FRGR----RVKILETRVARRSDAESGELFAEDGRLFLGTPQGALELLTVQPEGKKPMAAG 294
Query: 296 DFLLGCPVIIGCIV 309
D+ G + G +
Sbjct: 295 DWGKGLRLEKGETL 308
>gi|259503544|ref|ZP_05746446.1| methionyl-tRNA formyltransferase [Lactobacillus antri DSM 16041]
gi|259168622|gb|EEW53117.1| methionyl-tRNA formyltransferase [Lactobacillus antri DSM 16041]
Length = 310
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 90/308 (29%), Positives = 155/308 (50%), Gaps = 14/308 (4%)
Query: 8 MGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MGT +FAV LQ L+ + + +V TQP G R S V + A ++ L P
Sbjct: 1 MGTPQFAVPILQGLLDRPEYDVQAVLTQPDHRVG-RKHVLTPSPVKQLAVANNIKVLQPA 59
Query: 67 K-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
K E ++ ++ D+ + AYG +P ++L A K+ N H SLLP++RG AP+Q +
Sbjct: 60 KLNKSPEMDEIIALQPDLLITAAYGQFLPSKLLAAAKIAAVNVHGSLLPKYRGGAPVQYS 119
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
I+ GD ETGI+IM M K +D G V R +PI + + + +LS+L ++E + +L
Sbjct: 120 IINGDAETGISIMYMVKQMDAGDVLAQRAIPIEKDDDNGTMFDKLSILGRDLLLETLPQL 179
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKH 245
+PQ E+ + ++ IS + R+++ A+ + + +R L P P + +
Sbjct: 180 VAGTATATPQDESKVVFSPNISTAQERIDYRLPADRIDDKVRGLRPAPLGNMVI----DG 235
Query: 246 ERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFLL 299
R K+ + ++ +PG+V+ +A G ++ RL+ AG + +DI +L
Sbjct: 236 LRTKIYDVTPLDEKTSLQPGQVVRATKHQLVLAAGNGTTYQVNRLKPAGKQAMDITAYLN 295
Query: 300 GCP-VIIG 306
G + G
Sbjct: 296 GHQGLTEG 303
>gi|225630569|ref|YP_002727360.1| methionyl-tRNA formyltransferase [Wolbachia sp. wRi]
gi|254789381|sp|C0R3S7|FMT_WOLWR RecName: Full=Methionyl-tRNA formyltransferase
gi|225592550|gb|ACN95569.1| methionyl-tRNA formyltransferase [Wolbachia sp. wRi]
Length = 299
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 97/301 (32%), Positives = 154/301 (51%), Gaps = 12/301 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMG+ FAV +L L+ S +V+VYT+ P+P+G RG K + S VH A+E ++
Sbjct: 1 MRIIFMGSPGFAVNSLSLLLKSKSEVVAVYTKAPKPSG-RGQKPMKSPVHVIAEESNIEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E E+F +F DVAVV AYGL++P+ ILN K G N H SLLPRWRGAAP
Sbjct: 60 CTPISLKFSAEQEKFRNFKPDVAVVAAYGLILPREILNIPKYGCINIHPSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ I+AGD ETG++IM++D+ LD+GP+ I + L + +
Sbjct: 120 IQHTILAGDQETGVSIMQLDEGLDSGPILKQ----EKFLIEKNDNYKTLHDKLSKLGSDL 175
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ K+ P +N + ++ + E + ++A P + I
Sbjct: 176 LLKVLNEIEKQLPLKQNDNDACYADKVEDYKIYASDACEVAYRKVKAFYP------KAFI 229
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+++RI++L++ + G+++N N I+ G + +Q G I DF+ G
Sbjct: 230 KIENKRIRILDADFEALASEQGKIVNDNMHISLKGGTLIPKVVQMEGRNPCSIEDFIRGL 289
Query: 302 P 302
Sbjct: 290 K 290
>gi|296394687|ref|YP_003659571.1| methionyl-tRNA formyltransferase [Segniliparus rotundus DSM 44985]
gi|296181834|gb|ADG98740.1| methionyl-tRNA formyltransferase [Segniliparus rotundus DSM 44985]
Length = 330
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 95/311 (30%), Positives = 146/311 (46%), Gaps = 6/311 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF G+ E A +L ++ H +++V T+PP +G RGL S V A E +P
Sbjct: 1 MRIVFAGSPEVAAVSLAKILDDGEHEVLAVITRPPARSG-RGLTRKPSPVGALAHERGVP 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L PT + L+ D A VV YG +IP +L + G+ N H SLLP WRGAA
Sbjct: 60 TLTPTSAKDPQLHAALAELAPDCAPVVGYGALIPPALLAVPRHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P Q AI AGD TG+ +++ LDTGPV I ++ L + L++ AH +
Sbjct: 120 PAQAAIAAGDEVTGVTTFLLEEGLDTGPVFGRATETIRADDTGGSLLERLALTGAHLLAT 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L+ L PQ ++G +YA KIS + +V + A V IRA++P PGAW
Sbjct: 180 TLSGLQSGALVPEPQPQDGASYAPKISAADAQVRWELPAHVVERRIRAMTPAPGAWTVFQ 239
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ + L + +PGE+ + + + ++ G + D+
Sbjct: 240 G-KRLKLGPLARPKEQVCGLRPGELRAAKSEVHVGAGAEVLALGEVRPEGKGAMRAVDWA 298
Query: 299 LGCPVIIGCIV 309
G + G
Sbjct: 299 RGARLAPGSTF 309
>gi|255325950|ref|ZP_05367040.1| methionyl-tRNA formyltransferase [Rothia mucilaginosa ATCC 25296]
gi|255296965|gb|EET76292.1| methionyl-tRNA formyltransferase [Rothia mucilaginosa ATCC 25296]
Length = 322
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 83/314 (26%), Positives = 141/314 (44%), Gaps = 20/314 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L +++ GT + AV L L +S +V V T+ P G R S V ++A+E LP
Sbjct: 2 LNIIYAGTPDVAVPPLDYLANSDKVRVVGVLTREDAPVG-RKRVLTPSPVAQRAEELGLP 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ + E NAD A VVAYG ++P L + + G+ N H S LP WRGAAP
Sbjct: 61 IVKANRWNDEAAAAIAELNADAAAVVAYGALLPLPALESLRYGWVNLHFSKLPAWRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRA++AG+ E +++ LDTGP ++++ + L+ +
Sbjct: 121 VQRALIAGEQEIFSTTFLLEEGLDTGPTFEQESTAVAADGTAGTVLMRLATSGGALLERT 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++LE + ++YA K+S + R+ + AE + R ++P PGAW E+
Sbjct: 181 FERLEAGENGTVQVEDESVSYASKMSIADGRLTWTEPAEQILARFRGVTPEPGAWCELGE 240
Query: 242 GNKHERIKLLESQLVE------------GEGKPGEV--INPNFTIACSQGAVRIMRLQRA 287
R K+ + + G PG V + + ++++Q A
Sbjct: 241 N----RFKIGGLAVADERLVQSLTEANGGPLAPGAVRLHAKKVLVGTGTEPLMLLQVQPA 296
Query: 288 GGRVLDIGDFLLGC 301
G +++D ++ G
Sbjct: 297 GKKMMDAPAWVRGA 310
>gi|148239435|ref|YP_001224822.1| methionyl-tRNA formyltransferase [Synechococcus sp. WH 7803]
gi|166215522|sp|A5GKR0|FMT_SYNPW RecName: Full=Methionyl-tRNA formyltransferase
gi|147847974|emb|CAK23525.1| Methionyl-tRNA formyltransferase [Synechococcus sp. WH 7803]
Length = 340
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 92/320 (28%), Positives = 146/320 (45%), Gaps = 35/320 (10%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT +AV TL L + H IV V TQP R G RG + + S V +AQE P
Sbjct: 1 MKILFWGTPAYAVPTLDTLHEAGHQIVGVVTQPDRRRG-RGKQLMPSPVKARAQELGCPV 59
Query: 63 LVPTKLGQ--EEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ + + +Q + +ADV+VVVA+G ++P+ IL LG +NGH SLLPRWRGA
Sbjct: 60 FTPERIRRDLDCQQQLNALDADVSVVVAFGQILPKDILQHPPLGCWNGHGSLLPRWRGAG 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS------VLC 174
PIQ +I+ GD ETG+ IM M++ LDTGPV +++ I+ N L + LS +L
Sbjct: 120 PIQWSILEGDPETGVGIMAMEEGLDTGPVLLEQRLSINLLENAHQLGERLSRLSADLMLQ 179
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
A ++EA + Q+ + ++ R +
Sbjct: 180 AMPVIEAAGPGLEAERWSRLQVRHQPEEGTYARMLSKEDFQLNWGDSALTIHRKVMGLYP 239
Query: 235 AWLEMMIGNKHERIKLLESQLV--------------------EGEGKPGEVI---NPNFT 271
+ + K R+K+L ++ + G PG+V+ +
Sbjct: 240 GAVTV---WKDRRLKVLATEPLIERLADDLSDEARALVGRWNTGAHPPGQVLHSADSGLV 296
Query: 272 IACSQGAVRIMRLQRAGGRV 291
++ + I Q G
Sbjct: 297 VSTHGCPILIREAQLEGKAR 316
>gi|157413395|ref|YP_001484261.1| putative methionyl-tRNA formyltransferase [Prochlorococcus marinus
str. MIT 9215]
gi|166988367|sp|A8G4Z4|FMT_PROM2 RecName: Full=Methionyl-tRNA formyltransferase
gi|157387970|gb|ABV50675.1| putative Methionyl-tRNA formyltransferase [Prochlorococcus marinus
str. MIT 9215]
Length = 328
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 87/327 (26%), Positives = 150/327 (45%), Gaps = 21/327 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT ++++++L L+ S+H I++V +QP + RG K + S + A++ +
Sbjct: 1 MRIIFWGTPDYSISSLDILIKSNHEIIAVVSQPDKKR-SRGNKLIASPIKSFAEQEYIKI 59
Query: 63 LVPTKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ S + D+ +V+AYG ++P+ IL K G +N HASLLPRWRGAA
Sbjct: 60 YTPEKIRNNIPFINELKSLSCDLFIVIAYGKILPKEILEIPKFGCWNAHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH---- 176
PIQ ++M GD TG+ IMKM + LDTG + K+ I + N L ++LS+L A
Sbjct: 120 PIQWSLMKGDEYTGVGIMKMSEGLDTGDLLLEEKIKIDNTDNLNTLTEKLSILSAKLLLK 179
Query: 177 -AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
+ ++ N L+ Q G ++ E + + + +P A
Sbjct: 180 AVSFLEKNINKKINSKLTKQNTLGREITYARMIEKSDFKVDWGNEAIKISRKIKALYPRA 239
Query: 236 WLEMMIGN-KHERIKLLESQLVEGE--------GKPGEVI----NPNFTIACSQGAVRIM 282
N K +IK+L S ++ KPG ++ N I+ + ++
Sbjct: 240 NTNFRGKNLKILKIKVLTSDEIKNAKYHLMSNYSKPGIILAVIENEGIIISTKTDPIILL 299
Query: 283 RLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ G + + +G
Sbjct: 300 EAKIEGKNISTKKQLIQQLKPSVGEYF 326
>gi|229820539|ref|YP_002882065.1| methionyl-tRNA formyltransferase [Beutenbergia cavernae DSM 12333]
gi|259646023|sp|C5C697|FMT_BEUC1 RecName: Full=Methionyl-tRNA formyltransferase
gi|229566452|gb|ACQ80303.1| methionyl-tRNA formyltransferase [Beutenbergia cavernae DSM 12333]
Length = 311
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT + A+ TL+ALV S H +V+ T+PP RRG S V A E +P
Sbjct: 1 MRVLFAGTPDVAIPTLRALVGSRHHVVAALTRPPARRSRRG-HDEPSPVAATAAELGVPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + + + + + DVAVVVAYG ++P+ +L + G+ N H S+LP WRGAAP
Sbjct: 60 LEPRSVRATDVAEELRALDLDVAVVVAYGALLPEDLLAIPRHGWINLHFSVLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A+ GD TG ++ LD GPV + + + L L+ +++
Sbjct: 120 VQHAVWHGDEVTGATTFRITAGLDEGPVYGVLTERVRPRDTSGDLLARLADAGPRLVLDT 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + Q ++G+T A ++S + RV + A V +RA +P PGAW +
Sbjct: 180 LDAVADGTARPQAQPDDGVTLAPRLSVEQARVRWADPALAVDRQVRACTPAPGAWTTLDG 239
Query: 242 GNKHERIKLLESQLVEGEGKP-GEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
R+K+ V+ P G + + V + RL AG +D +
Sbjct: 240 A----RVKVGPLDPVDAPPLPAGRIAVERQRVLVGTGSAPVELGRLAPAGKGWMDAASWA 295
Query: 299 LGCPVIIGCIVG 310
G + G
Sbjct: 296 RGARLAGDATFG 307
>gi|218513017|ref|ZP_03509857.1| methionyl-tRNA formyltransferase [Rhizobium etli 8C-3]
Length = 204
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 117/199 (58%), Positives = 144/199 (72%), Gaps = 1/199 (0%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+L ++FMGT EF+V TL+ LV + H IV+VYTQPPRP GRRGL S VH+ A+ L
Sbjct: 1 MSLSIIFMGTPEFSVPTLRLLVDAGHRIVAVYTQPPRPGGRRGLDLQKSPVHQAAELLGL 60
Query: 61 PALVP-TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P EE E+F +F ADVAVVVAYGL++P+ ILN T+ G YNGHASLLPRWRGA
Sbjct: 61 PVFTPVNFKDAEERERFAAFKADVAVVVAYGLLLPEAILNGTRDGCYNGHASLLPRWRGA 120
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRAIMAGD++TG+ +MKMDK LDTG VA R+V I N+ L L + A+AM
Sbjct: 121 APIQRAIMAGDDKTGMMVMKMDKGLDTGAVALSREVEIGPNMTAGELHDRLMQVGANAMA 180
Query: 180 EAMDKLEQNNLPLSPQIEN 198
EAM KLE N+LPL+PQ ++
Sbjct: 181 EAMVKLEMNDLPLTPQRQD 199
>gi|224418186|ref|ZP_03656192.1| methionyl-tRNA formyltransferase [Helicobacter canadensis MIT
98-5491]
gi|253827513|ref|ZP_04870398.1| methionyl-tRNA formyltransferase [Helicobacter canadensis MIT
98-5491]
gi|253510919|gb|EES89578.1| methionyl-tRNA formyltransferase [Helicobacter canadensis MIT
98-5491]
Length = 300
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 59/307 (19%), Positives = 128/307 (41%), Gaps = 8/307 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT +A L++L+ H++ ++ QP + AG R ++ + A + + L
Sbjct: 1 MNIVFMGTPSYAAVILESLLK-KHTLKALVCQPDKKAG-RDMRLKMPATKELLLQQGLEI 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ +E D ++V N HAS+LP++RGA+PI
Sbjct: 59 PIFQPAVLDEGFLETLKQIDFDMIVVAAFGKILPKSILELAPCVNLHASILPKFRGASPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q +I+ +N G+ +M+M++ LD+G + R + + +
Sbjct: 119 QESILEDENFFGVTLMQMEEGLDSGDILGFRILKNRGQNARELFAELSEAAAKLTLDYLE 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + + + ++ +E +++AL+ + + G
Sbjct: 179 RWKVIIPMKQNNADSSYCKK------IKKEMSLVDFSEARSLYLKALAYEGWPEIFLQSG 232
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
K +++ L E++ + G+ ++ + C +G+V I LQ R+++ ++L G
Sbjct: 233 LKLKKVLLKENESINKAGEILGILEDKILVGCLRGSVWIQALQAPSKRIVNAYEYLQGKR 292
Query: 303 VIIGCIV 309
+ G I+
Sbjct: 293 LKKGDIL 299
>gi|313141721|ref|ZP_07803914.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Helicobacter canadensis MIT
98-5491]
gi|313130752|gb|EFR48369.1| 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet)
N-formyltransferase [Helicobacter canadensis MIT
98-5491]
Length = 305
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 59/307 (19%), Positives = 128/307 (41%), Gaps = 8/307 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VFMGT +A L++L+ H++ ++ QP + AG R ++ + A + + L
Sbjct: 6 MNIVFMGTPSYAAVILESLLK-KHTLKALVCQPDKKAG-RDMRLKMPATKELLLQQGLEI 63
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ +E D ++V N HAS+LP++RGA+PI
Sbjct: 64 PIFQPAVLDEGFLETLKQIDFDMIVVAAFGKILPKSILELAPCVNLHASILPKFRGASPI 123
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q +I+ +N G+ +M+M++ LD+G + R + + +
Sbjct: 124 QESILEDENFFGVTLMQMEEGLDSGDILGFRILKNRGQNARELFAELSEAAAKLTLDYLE 183
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + + + ++ +E +++AL+ + + G
Sbjct: 184 RWKVIIPMKQNNADSSYCKK------IKKEMSLVDFSEARSLYLKALAYEGWPEIFLQSG 237
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
K +++ L E++ + G+ ++ + C +G+V I LQ R+++ ++L G
Sbjct: 238 LKLKKVLLKENESINKAGEILGILEDKILVGCLRGSVWIQALQAPSKRIVNAYEYLQGKR 297
Query: 303 VIIGCIV 309
+ G I+
Sbjct: 298 LKKGDIL 304
>gi|168704062|ref|ZP_02736339.1| methionyl-tRNA formyltransferase [Gemmata obscuriglobus UQM 2246]
Length = 335
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 91/331 (27%), Positives = 156/331 (47%), Gaps = 24/331 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSA--VHKKAQEFS 59
+R+V MGT FA T +AL+++ +V + TQP R G + + + + A+ +
Sbjct: 1 MRIVMMGTGTFAEPTFEALIAAFGADVVGLVTQPERDTGNKRGSTRQTGKGMANIARAAN 60
Query: 60 LPALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P + E + D+ VV AYG ++ + ++NA G N HASLLP++RG
Sbjct: 61 IPVAQPESINTPEGLTQLQAMAPDLLVVAAYGQILSKDVINAPTRGIINVHASLLPKYRG 120
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAP+ AI+ G+ TG+ I+K+ LD+G + + I T L+ L+ L A
Sbjct: 121 AAPVAYAILGGEARTGVTIIKVTPGLDSGDMVLQESLDILPTDTTGTLEARLATLGAGMA 180
Query: 179 VE-AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
VE + + Q +T A KI K +++ + A V +RA+ P+P A+
Sbjct: 181 VEATQKYAAGGPVEGAKQDPALVTKAPKIKKEFGLIDWTKPAGYVERFVRAMQPWPTAYT 240
Query: 238 EMMIGNKHERIKLLESQLVEGEGKP--------GEV-------INPNFTIAC--SQG-AV 279
+ K E ++++ S++ G P G V ++ N I+ ++
Sbjct: 241 FLHRPGK-EPMRVIVSKVACGAMCPCGPNRPATGTVSGSRKDPVSGNVVISVWVGDNISI 299
Query: 280 RIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ LQ AG + + +FL G P++ G G
Sbjct: 300 DLSELQPAGKKKMTAEEFLRGYPIVEGMRFG 330
>gi|189485013|ref|YP_001955954.1| methionyl-tRNA formyltransferase [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|229487572|sp|B1GZ11|FMT_UNCTG RecName: Full=Methionyl-tRNA formyltransferase
gi|170286972|dbj|BAG13493.1| methionyl-tRNA formyltransferase [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 312
Score = 126 bits (316), Expect = 5e-27, Method: Composition-based stats.
Identities = 88/315 (27%), Positives = 150/315 (47%), Gaps = 11/315 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT+ + L+ L H I V T P +PA RG K + AV A + ++
Sbjct: 1 MRILFFGTAFISETYLKELHKKCHEI-FVVTTPDKPA-LRGQKLIYPAVKVYAVKNNISF 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ P K + E +F AD V VAYG +IP+ + + K +N H SLLP+++GAAP+
Sbjct: 59 IQPEKFTLDVIETIKNFAADTGVAVAYGKLIPKVVFDIPKYKTFNIHFSLLPKYKGAAPV 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q A+ G+ ETGI+ +++ LDTG + K+ IS N L +L +L M + +
Sbjct: 119 QHALCRGETETGISSFYIEEGLDTGGIIIQEKLNISIKDNAETLLNKLILLGIDVMNKTL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + Q + VN+ + A ++N R L +PG + + G
Sbjct: 179 ELFRCGKCDAASQTGDPSFAPSLKKIDGL-VNWNKRAGEIYNQFRGLYLWPGIYSTISQG 237
Query: 243 N-KHERIKLLESQLVEGEG---KPGEVINP----NFTIACSQGAVRIMRLQRAGGRVLDI 294
+RIK E ++ + + G V + FT++C+ G + ++++Q V+
Sbjct: 238 KLVGKRIKFREIEVFDSDSINKDSGIVYSAEKNRGFTVSCAVGRILVVKMQSENKPVVSA 297
Query: 295 GDFLLGCPVIIGCIV 309
DF+ G + G
Sbjct: 298 WDFIQGRQISAGDRF 312
>gi|296535342|ref|ZP_06897544.1| methionyl-tRNA formyltransferase [Roseomonas cervicalis ATCC 49957]
gi|296264326|gb|EFH10749.1| methionyl-tRNA formyltransferase [Roseomonas cervicalis ATCC 49957]
Length = 268
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 111/277 (40%), Positives = 165/277 (59%), Gaps = 14/277 (5%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M+ LR+ FMG+ +FAV L+AL ++ H + +VYTQPPRP+G RG K VH+ A E
Sbjct: 1 MSHLRLAFMGSPDFAVPALRALHAAGHEVAAVYTQPPRPSG-RGQKETPCPVHRAALELG 59
Query: 60 LPALVPTKLGQEEYEQ--FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP P +L ++ Q F + + DVAVV AYGL++P +L A + G N HASLLPRWR
Sbjct: 60 LPVRNPVRLKRDMQAQAEFAALDLDVAVVAAYGLILPAAMLAAPRRGCLNIHASLLPRWR 119
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA PIQ AI+AGD ETGI IM+M++ LDTGP+ ++PI T + L A
Sbjct: 120 GAGPIQAAILAGDAETGITIMQMEEGLDTGPMLLAGRLPIGPRDGTPAIHDAL----AAM 175
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
E + + N PQ E G+TYA K+SK + R+++ + A + +RAL+P+PG +
Sbjct: 176 GGELILRALAENPAAVPQPEQGVTYAPKLSKADGRLDWTQDAAALDRRVRALNPWPGTFF 235
Query: 238 EMMIGNKHERIKLLESQLVEG--EGKPGEVINPNFTI 272
E ++ E +++L ++ V+ PG +++ +
Sbjct: 236 E----HQGETLRVLAAEPVDDAPAAPPGTLLDDAALV 268
>gi|72382206|ref|YP_291561.1| methionyl-tRNA formyltransferase [Prochlorococcus marinus str.
NATL2A]
gi|123773800|sp|Q46KX0|FMT_PROMT RecName: Full=Methionyl-tRNA formyltransferase
gi|72002056|gb|AAZ57858.1| methionyl-tRNA formyltransferase [Prochlorococcus marinus str.
NATL2A]
Length = 336
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 92/336 (27%), Positives = 153/336 (45%), Gaps = 29/336 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VF GT ++A L+ + + + +++V TQP R G RG K S V + A+E S+P
Sbjct: 1 MKIVFWGTPKYAAENLKTIAKAGYEVIAVVTQPDRKRG-RGKKLSPSPVKEAAEELSIPV 59
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ +++ + + + ADV +VVA+G ++P+ IL+ KLG +N HASLLP WRGAA
Sbjct: 60 YATNSISKDQKTKEILLNLKADVYLVVAFGQILPKEILDQPKLGCWNSHASLLPVWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ +I+ D +TGI IM M++ LDTGPV I + N L LSV+ + +++
Sbjct: 120 PIQWSIINADAKTGICIMSMEEGLDTGPVIEQESTVIKDSDNLEILTNRLSVMSSKLLLK 179
Query: 181 AMDKLE----QNNLPLSPQ--IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
+++K++ N Q S + + + L G
Sbjct: 180 SLEKIKLTKGLNKSSRLKQLNAIEQRNLNGIPSYARQITKEDNLIDWNQDARKILKKIQG 239
Query: 235 AWLEMMIGNKHERIKLLESQLVEGEGK----------------PGEV--INP--NFTIAC 274
+ +RIK+L++ + + PGE+ IN I
Sbjct: 240 LYPNAYTLYNGKRIKILDAIISCDNNQSKESQDIKNQSKSNRIPGEIFMINKQIGIKIMT 299
Query: 275 SQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ V I Q G + D + + I +G
Sbjct: 300 NDFPVLIKYAQLEGKKATDSYTLSIQSNLSINDKLG 335
>gi|208435038|ref|YP_002266704.1| methionyl-tRNA formyl transferase [Helicobacter pylori G27]
gi|208432967|gb|ACI27838.1| methionyl-tRNA formyl transferase [Helicobacter pylori G27]
Length = 298
Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 85/305 (27%), Positives = 137/305 (44%), Gaps = 11/305 (3%)
Query: 8 MGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--SLPALV 64
MGT FA L+ALV + +V ++TQ +P G R + E ++P
Sbjct: 1 MGTPGFAEVILRALVENKDIEVVGLFTQMDKPFG-RKKELKAPETKTYILENHLNIPIFQ 59
Query: 65 PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
P L + E + D VVVAYG ++P+ +L N HASLLP++RGA+PI
Sbjct: 60 PQSLKEPEVQILKDLKPDFIVVVAYGKILPKEVLTIA--PCINLHASLLPKYRGASPIHE 117
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
I+ D GI+ M MD LD+G + +N L +L+ + A ++ +
Sbjct: 118 MILNDDKIYGISTMLMDMELDSGDILESASFLREDYLNLDALSLKLAHMGAALLLSTLKN 177
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
PQ ++ +KI+K + V F + + S + + K
Sbjct: 178 FSSITRK--PQDHTQASFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEIFLESSLK 232
Query: 245 HERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVI 304
++L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L G +
Sbjct: 233 LLDVELVENEKSHKEGEILEIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKDYLNGKRLK 292
Query: 305 IGCIV 309
IG I+
Sbjct: 293 IGGIL 297
>gi|328465623|gb|EGF36846.1| methionyl-tRNA formyltransferase [Lactobacillus helveticus MTCC
5463]
Length = 278
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 88/283 (31%), Positives = 155/283 (54%), Gaps = 11/283 (3%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT EF+V L+ L+ +++ I +V TQP + G R K + A++ LP P K
Sbjct: 1 MGTPEFSVPVLEGLIKNNYEIKAVVTQPDKKVG-RKQKITKTPAKIAAEKHGLPVFQPVK 59
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
G EE +Q + +AD+ V AYG +P + L + K+ N H SLLP++RG APIQ ++
Sbjct: 60 LSGSEEMQQVIDMHADLIVTAAYGQFLPTKFLKSVKIAAVNVHGSLLPKYRGGAPIQYSL 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ GD ETGI IM+M K +D G + + + I + N L +LS++ ++E + +
Sbjct: 120 INGDAETGITIMEMVKKMDAGDIYSQKAIKIEPDDNAGTLFSKLSIVGRDLLLETLPSII 179
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
++ PQ + + ++ I+K + R+ +A +N IRAL+P PGA++ + +
Sbjct: 180 DGSIKKIPQDPDKVVFSPNITKEQERIGPTMTATEANNMIRALNPDPGAYMMLKG----K 235
Query: 247 RIKLLESQLVE--GEGKPGEVI--NPNFTIACSQG-AVRIMRL 284
R K+ ++++ + + KPG V+ F I+ + G + ++ +
Sbjct: 236 RFKVWKAEVAKDSTDLKPGCVVANKGRFAISFADGTVLNLLEV 278
>gi|302812659|ref|XP_002988016.1| hypothetical protein SELMODRAFT_127297 [Selaginella moellendorffii]
gi|300144122|gb|EFJ10808.1| hypothetical protein SELMODRAFT_127297 [Selaginella moellendorffii]
Length = 366
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 95/320 (29%), Positives = 145/320 (45%), Gaps = 23/320 (7%)
Query: 4 RVVFMGTSEFAVATLQALVS------SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
R+VF+GT E A L +L+ S I + TQPP G RG K + S V ++A +
Sbjct: 35 RLVFLGTPEPAAKVLDSLLDAAAAKDSKFEIAGIVTQPPAARG-RGKKQMPSLVAQRALD 93
Query: 58 FSLPALVPTKLGQEEYEQFLSF----NADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P + + + FL D+ V AYG ++ Q+ L+ KLG N H SLL
Sbjct: 94 RQFPPHLIFSPEKASEQCFLEELKSLEPDLCVTAAYGNILSQKFLDIPKLGTVNVHPSLL 153
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
P +RGAAP+QRAI G TG+++ + LD+GPV V + NI LQ L
Sbjct: 154 PLYRGAAPVQRAIQDGVKVTGVSVAYTVRALDSGPVVASESVEVDENIKAPELQDLLFSK 213
Query: 174 CAHAMVEAMDKLEQNNLPLS--PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
++ M L Q + T+A KI ++F A +HN +RA S
Sbjct: 214 GTCLLLREMPHLLDGTGRSRATEQDHSRATHAPKIGVEGAWLSFEEPAAIIHNKVRAFSE 273
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEG----EGKPGE---VINPN-FTIACSQ-GAVRIM 282
+PG + + + ++R +LE ++V G P ++N + C + I+
Sbjct: 274 WPGTKAKFHLSSSNDRE-ILEMKIVTTRVCQSGFPSTRSILLNAGSMLVECGDHSWLEIL 332
Query: 283 RLQRAGGRVLDIGDFLLGCP 302
+Q G +V+ DF G
Sbjct: 333 EVQPPGRKVMKARDFWNGLQ 352
>gi|115439267|ref|NP_001043913.1| Os01g0687500 [Oryza sativa Japonica Group]
gi|56784449|dbj|BAD82542.1| Met-tRNAi formyl transferase-like [Oryza sativa Japonica Group]
gi|113533444|dbj|BAF05827.1| Os01g0687500 [Oryza sativa Japonica Group]
gi|215697310|dbj|BAG91304.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619073|gb|EEE55205.1| hypothetical protein OsJ_03057 [Oryza sativa Japonica Group]
Length = 362
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 90/331 (27%), Positives = 154/331 (46%), Gaps = 27/331 (8%)
Query: 2 TLRVVFMGTSEFAVATLQALV------SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
+VF+G+ + A + L+ L+ SS + +V TQPP A RG K + SAV + A
Sbjct: 32 KKNIVFLGSPQVAASVLETLLVASESPDSSFQVSAVVTQPPA-AKNRGRKLMPSAVAQLA 90
Query: 56 QEFSLP----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
+ P + ++ + AYG ++PQR L+ G N H S
Sbjct: 91 LDRGFPGDLIFTPERAGEEAFLSDLKEVRPELCITAAYGNILPQRFLDIPPYGTVNIHPS 150
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLP +RGAAP+QRA+ G ETG+++ + LD GPV K + I L L
Sbjct: 151 LLPLYRGAAPVQRALQDGVEETGVSLAYTVRALDAGPVIASEKFAVDEYIKAPELLAILF 210
Query: 172 VLCAHAMVEAMDKLEQN--NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL 229
L + ++ + + PQ ++ IT+A K++ E+ ++F + A+ +HN +RA
Sbjct: 211 NLGSKLLLHELPSILDGTAKEKAKPQDDSKITHAPKLNSDESWLSFNQEAKLLHNKVRAF 270
Query: 230 SPFPGAWLEMMIGNKHERIKLLESQLVEGEG-----KPG---EVI--NPNFTIACSQGA- 278
+ +PG ++ + N++ +LE +++ + K G EV+ + I C +
Sbjct: 271 AGWPGTRAKLQLVNQNGEPDVLEIKVISTKACASCDKTGDGNEVLFSGNSLLIPCGGSSC 330
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ ++ LQ G +V DF G G +
Sbjct: 331 LEVVELQLPGKKVTTARDFWNGLR---GQRL 358
>gi|203287533|ref|YP_002222548.1| methionyl-tRNA formyltransferase [Borrelia recurrentis A1]
gi|229487443|sp|B5RQP3|FMT_BORRA RecName: Full=Methionyl-tRNA formyltransferase
gi|201084753|gb|ACH94327.1| methionyl-tRNA formyltransferase [Borrelia recurrentis A1]
Length = 309
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 79/311 (25%), Positives = 138/311 (44%), Gaps = 7/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ F + A+ L+ +S + +V V T P +P+G RGL ++ + ++A +
Sbjct: 1 MRIFFASSDGIALEVLKK-ISDQYDVVGVLTAPDKPSG-RGLSLKVNDIKREALSRKITV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P L + S ++ +V +YG + Q L+ +G N H SLLP++RG +PI
Sbjct: 59 LQPVVLDADVINLVKSLEPELMLVFSYGKIFKQEFLDIFPVGCINIHPSLLPKYRGPSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q I+ GD+ +GI + KM +D+G + + I S + + E L + +V
Sbjct: 119 QTVILNGDSVSGITVQKMTLEMDSGNILAQSQFEIKSFNTSVDIF-EYVSLNSFDLVIEA 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
Q +N TY + K ++F SA ++ N I A +P+P A +
Sbjct: 178 LNKLLKGDIGIVQDKNNATYCSFLGKEHRTIDFKLSAFDIKNKINAYNPWPLARARLDNN 237
Query: 243 NKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
S + G++I + + G + ++ LQR G +VLD F
Sbjct: 238 EIIFYRADFISTNDYDDQVIGKIIAFDPSKGLLVKTGDGILVVLELQRIGKKVLDCVSFY 297
Query: 299 LGCPVIIGCIV 309
G +IG +
Sbjct: 298 HGNRDLIGKVF 308
>gi|203283990|ref|YP_002221730.1| methionyl-tRNA formyltransferase [Borrelia duttonii Ly]
gi|229487440|sp|B5RKW3|FMT_BORDL RecName: Full=Methionyl-tRNA formyltransferase
gi|201083433|gb|ACH93024.1| methionyl-tRNA formyltransferase [Borrelia duttonii Ly]
Length = 309
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 80/311 (25%), Positives = 139/311 (44%), Gaps = 7/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ F + A+ L+ +S + +V V T P +P+G RGL ++ + ++A +
Sbjct: 1 MRIFFASSDVIALEVLKK-ISDQYDVVGVLTAPDKPSG-RGLSLKVNDIKREALSRKITV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P L + S ++ +V +YG + Q L+ +G N H SLLP++RG +PI
Sbjct: 59 LQPVVLDADVINLVKSLEPELMLVFSYGKIFKQEFLDIFPVGCINIHPSLLPKYRGPSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD+ +GI + KM +D+G + + I S + + E L + +V
Sbjct: 119 QTAILNGDSISGITVQKMTLEMDSGNILAQSQFEIKSFNTSVDIF-EYVSLNSFDLVIEA 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
Q +N TY + K ++F SA ++ N I A +P+P A +
Sbjct: 178 LNKLLKGDIGIVQDKNNATYCSFLGKEHRTIDFKLSAFDIKNKINAYNPWPLARARLDNN 237
Query: 243 NKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
S + G++I + + G + ++ LQR G +VLD F
Sbjct: 238 EIIFHRADFISTNDYDDQVIGKIIAFDPSKGLLVKTGDGILVVLELQRIGKKVLDCVSFY 297
Query: 299 LGCPVIIGCIV 309
G +IG +
Sbjct: 298 HGNRDLIGKVF 308
>gi|218188871|gb|EEC71298.1| hypothetical protein OsI_03318 [Oryza sativa Indica Group]
Length = 362
Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats.
Identities = 90/331 (27%), Positives = 154/331 (46%), Gaps = 27/331 (8%)
Query: 2 TLRVVFMGTSEFAVATLQALV------SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
+VF+G+ + A + L+ L+ SS + +V TQPP A RG K + SAV + A
Sbjct: 32 KKNIVFLGSPQVAASVLETLLVASESPDSSFQVSAVVTQPPA-AKNRGRKLMPSAVAQLA 90
Query: 56 QEFSLP----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
+ P + ++ + AYG ++PQR L+ G N H S
Sbjct: 91 LDRGFPGDLIFTPERAGEEAFLSDLKEVRPELCITAAYGNILPQRFLDIPPYGTVNIHPS 150
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLP +RGAAP+QRA+ G ETG+++ + LD GPV K + I L L
Sbjct: 151 LLPLYRGAAPVQRALQDGVEETGVSLAYTVRALDAGPVIASEKFAVDEYIKAPELLAILF 210
Query: 172 VLCAHAMVEAMDKLEQN--NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL 229
L + ++ + + PQ ++ IT+A K++ E+ ++F + A+ +HN +RA
Sbjct: 211 NLGSKLLLHELPSILDGTAKEKAKPQDDSKITHAPKLNSDESWLSFNQEAKLLHNKVRAF 270
Query: 230 SPFPGAWLEMMIGNKHERIKLLESQLVEGEG-----KPG---EVI--NPNFTIACSQGA- 278
+ +PG ++ + N++ +LE +++ + K G EV+ + I C +
Sbjct: 271 AGWPGTRAKLQLVNQNGESDVLEIKVISTKACASCDKTGDGNEVLFSGNSLLIPCGGSSC 330
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ ++ LQ G +V DF G G +
Sbjct: 331 LEVVELQLPGKKVTTARDFWNGLR---GQRL 358
>gi|157826976|ref|YP_001496040.1| methionyl-tRNA formyltransferase [Rickettsia bellii OSU 85-389]
gi|157802280|gb|ABV79003.1| methionyl-tRNA formyltransferase [Rickettsia bellii OSU 85-389]
Length = 278
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 98/269 (36%), Positives = 150/269 (55%), Gaps = 10/269 (3%)
Query: 37 RPAGRRGLKSVLSAVHKKAQEFSLPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQ 95
+P G RGL S +H+ A E +P PT +E + +AD+ VV+AYG +IPQ
Sbjct: 9 KPKG-RGLSETKSPIHQLADEAQIPVYTPTTLRNEEAANLINNIDADIIVVIAYGFIIPQ 67
Query: 96 RILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKV 155
IL+A K G N H S LPR RGAAP+QR I+ GD + + IM+MD LDTG +
Sbjct: 68 NILDAKKYGCLNIHPSDLPRHRGAAPLQRTIIEGDKTSSVCIMQMDAGLDTGDILMKEDF 127
Query: 156 PISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNF 215
+ I L + + L A +++ + +++ PQ G+TYA K++K E RVN+
Sbjct: 128 DLPKKITLQELHDKCANLGAELLIKTLANIDKIVPK--PQSNEGVTYAHKLTKEEGRVNW 185
Query: 216 CRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLV--EGEGKPGEVINPNFTIA 273
SA +++ +R ++P+PG + + + IK+LE++ E PG +IN N IA
Sbjct: 186 QDSAFSINCKVRGMNPWPGVYFKY----NDKTIKILEAEYSDEEHNFTPGTIINKNLEIA 241
Query: 274 CSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
C +G + I +LQ+ G +VL+I +FL G
Sbjct: 242 CGKGILMIKKLQQEGKKVLNIEEFLRGFK 270
>gi|170749197|ref|YP_001755457.1| methionyl-tRNA formyltransferase [Methylobacterium radiotolerans
JCM 2831]
gi|170655719|gb|ACB24774.1| Methionyl-tRNA formyltransferase [Methylobacterium radiotolerans
JCM 2831]
Length = 310
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 80/315 (25%), Positives = 133/315 (42%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ F+G +F A L+A + + +V+ P +P G K + A E L
Sbjct: 1 MRIAFIGQQDFGKAVLEAFLERGDEVAAVFCAPEKP----GAK--PDVLKTAAVEKGLTV 54
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E NAD+ ++ PQ ++ G H SLLPR+RG +
Sbjct: 55 FQFPSLKSPEAEAAMRGLNADIGIMAYVLQFAPQSFVSIPTHGTIQYHPSLLPRYRGPSS 114
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNIN-TAGLQQELSVLCAHAMVE 180
I I G+ +TG+ I + LD GPV + PI ++ L + AM+E
Sbjct: 115 INWPIARGELQTGLTIFRPTDGLDEGPVILQKSCPIGADATLGDVYFDNLFPMGVAAMLE 174
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A D + Q E+ +Y E +++ AE ++N IRA +P PGAW
Sbjct: 175 AADLVVAGQHVEIDQDEDAASYEGWFRAAEAEIHWSSHAEQIYNLIRAANPAPGAWTTHD 234
Query: 241 IGNKHERIKLLE--SQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
L +L + GKPGEVI + F++ G + + +++ GG+ +
Sbjct: 235 GKKLQIFDCSLHRIRKLADVVGKPGEVIAVDDQGFSVCAQGGQIEVRKVKAEGGKKVAAA 294
Query: 296 DFLLGCPVIIGCIVG 310
+F + +G ++G
Sbjct: 295 EFAREAGLAVGQVLG 309
>gi|239904669|ref|YP_002951407.1| methionyl-tRNA formyltransferase [Desulfovibrio magneticus RS-1]
gi|239794532|dbj|BAH73521.1| methionyl-tRNA formyltransferase [Desulfovibrio magneticus RS-1]
Length = 336
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 106/306 (34%), Positives = 159/306 (51%), Gaps = 11/306 (3%)
Query: 6 VFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
VFMGT EFA L+ ++ S ++ +VYTQP RP G RG K +L V K A E LP
Sbjct: 15 VFMGTPEFAATVLEHVLGSQDVTVAAVYTQPDRPCG-RGKKCLLGPVKKLALERGLPIHQ 73
Query: 65 PTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P ++ DV +V AYG+++PQ +L+ L N HASLLP WRGAAPI+
Sbjct: 74 PESFKDPAEVATLAAYKPDVLLVAAYGMILPQAVLDVPALMPLNVHASLLPAWRGAAPIE 133
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
R+I AG+ TG+ IM+M LD GP+ R + + N ++ EL+ L + +
Sbjct: 134 RSIAAGETLTGVTIMRMALALDAGPMVMQRTLAVGINDTAGTIRAELADLGGRVLTHCLK 193
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+L Q +PL Q +TYA+KI K E +++ R A VHNHIR+++P PGA+
Sbjct: 194 RLRQGGVPLVEQDATRVTYAKKIDKAEALIDWNRPAAEVHNHIRSMTPNPGAFFFWKPAA 253
Query: 244 KHERIKLLE-----SQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++++ + KPG+++ + IAC+ + + AG R ++
Sbjct: 254 DKPALRIIAQPGKVGCPLPSGAKPGDILGLMDCQIGIACADAVYLVPAVIPAGKRPMNAQ 313
Query: 296 DFLLGC 301
F G
Sbjct: 314 AFSCGY 319
>gi|213584236|ref|ZP_03366062.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 171
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 78/156 (50%), Positives = 104/156 (66%), Gaps = 2/156 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL++S H+IV V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLTSGHNIVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E + ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQHLVADLHADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
PIQR++ AGD ETG+ IM+MD LDTG + + P
Sbjct: 123 PIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACP 158
>gi|269215461|ref|ZP_06159315.1| methionyl-tRNA [Slackia exigua ATCC 700122]
gi|269130948|gb|EEZ62023.1| methionyl-tRNA [Slackia exigua ATCC 700122]
Length = 311
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 92/303 (30%), Positives = 139/303 (45%), Gaps = 7/303 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ FMGT EFA L + H IV V+T+P G RG K V S V + A E +P
Sbjct: 1 MRIAFMGTPEFAARILIE-IKEQHDIVCVHTRPDAVRG-RGSKLVSSPVKRVALESGIPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E S DV V AYG ++PQ +L+ + G N HASLLP++RGAAP
Sbjct: 59 REPRTLRDAGELAFLRSLAPDVVCVAAYGKILPQVVLDVPRFGCLNVHASLLPKYRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I+RAI+AGD + G+ IM+M+ LDTGP R V + L EL+ + + A++ A
Sbjct: 119 IERAILAGDEQVGVCIMRMEAGLDTGPFCISRSV-AVAGRGCEHLTGELADIGSCALLSA 177
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +LE + Q + +YA KI +GE ++ ++A S + +
Sbjct: 178 LAELETGAVRWIDQDDACASYAPKIERGELDLDPAEPVAVNLRRVQASSTAHTSRCRIGA 237
Query: 242 GNKHERIKLLESQLVEGEGKPG--EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ + G + + C+ GAV + ++ G + F
Sbjct: 238 KGITVVSAGAAPEGARAPAQ-GMATFSSKKLLLGCADGAVELHEVRPDGKATMSAKAFAA 296
Query: 300 GCP 302
G
Sbjct: 297 GVQ 299
>gi|307106630|gb|EFN54875.1| hypothetical protein CHLNCDRAFT_48904 [Chlorella variabilis]
Length = 339
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 88/322 (27%), Positives = 140/322 (43%), Gaps = 27/322 (8%)
Query: 8 MGTSEFAVATLQALV------SSSHSIVSVYTQPPRPAGRRGLKS-VLSAVHKKAQEFSL 60
M T + A L+ L+ +S + +V TQPPRP GR K S V A+E L
Sbjct: 1 MSTPQVAALVLKRLLAAAAQPDASFEVAAVVTQPPRPTGRGNRKVPQPSPVQVLAEEAGL 60
Query: 61 P----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E D+ V AYG +P L G N H SLLPR+
Sbjct: 61 PAGAILAPERPGDAEFLAALRQLAPDLCVTAAYGNYLPSSFLAVPPHGTLNIHPSLLPRY 120
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAP+QR++ G TG+ ++ + +D GP+ +K+P+ +I L L L
Sbjct: 121 RGAAPVQRSLQDGVPITGVTVLYTVRAMDAGPILAQQKMPVDPDIQAPELLNRLFELGTD 180
Query: 177 AMVEAMD--KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
+V+ ++ L PQ E T+A K+ + E ++F + A+ HN +R + +PG
Sbjct: 181 LLVDNLEAVWAGMGQLAAQPQDEAAATHAAKLQRHEAVLDFSQPAQACHNKVRGFAGWPG 240
Query: 235 AWLEMM-------IGNKHERIKLLESQLVEGEGKPGE------VINPNFTIACSQGA-VR 280
+ H +K++ +++ + G V I C G+ ++
Sbjct: 241 TFATFQQRDAGGGGDAGHVELKIVRTRVAQPSEWSGSSEREVAVGRDALFIRCGDGSVLQ 300
Query: 281 IMRLQRAGGRVLDIGDFLLGCP 302
++ LQ G RV+ DF+ G
Sbjct: 301 VLELQAPGKRVMAAKDFVNGLK 322
>gi|51598325|ref|YP_072513.1| methionyl-tRNA formyltransferase [Borrelia garinii PBi]
gi|73919381|sp|Q662V0|FMT_BORGA RecName: Full=Methionyl-tRNA formyltransferase
gi|51572896|gb|AAU06921.1| methionyl-tRNA formyltransferase [Borrelia garinii PBi]
Length = 315
Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 81/312 (25%), Positives = 148/312 (47%), Gaps = 9/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ F+ +S A+ + ++ + +V V T P +P G RG K + + +A +
Sbjct: 1 MKIFFVSSSFIALEVFKEIL-RHYEVVGVLTLPDKPKG-RGQKLSQNVIKVEAIAKDIKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P L N D+ +V +YG + + L+ ++G N H SLLP++RG +PI
Sbjct: 59 FDPLILDNNTLNSIRDLNPDLMLVFSYGKIFKKEFLDIFRMGCINVHPSLLPKYRGVSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD +GI I M +D+G + +K I S + + + +S L ++EA+
Sbjct: 119 QSAILNGDCVSGITIQSMALEMDSGNILVQKKFKIRSYDTSYDISKLVSSLSPSLVLEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+K+ + L PQ + T+ + K ++F S+ + N I A +P+P ++
Sbjct: 179 EKISKGFL-GIPQKSSEATFCSFLKKELGFIDFNLSSFEIKNRINACNPWPLVRAKLDYS 237
Query: 243 NK-HERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ R E L + K GE+++ + +G + ++ +QR G RVLD F
Sbjct: 238 DIIFHRADFWEIDLYKER-KVGEIVDFDPERGLFVNTGKGILFLLEVQRPGRRVLDFKSF 296
Query: 298 LLGCPVIIGCIV 309
G +IG +
Sbjct: 297 YNGSRQLIGRVF 308
>gi|226531898|ref|NP_001149111.1| LOC100282733 [Zea mays]
gi|194701390|gb|ACF84779.1| unknown [Zea mays]
gi|195624820|gb|ACG34240.1| methionyl-tRNA formyltransferase [Zea mays]
Length = 360
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 87/331 (26%), Positives = 149/331 (45%), Gaps = 27/331 (8%)
Query: 2 TLRVVFMGTSEFAVATLQALV------SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
+VF+G+ + A + L L+ S+ + +V TQPP A RG K + SAV + A
Sbjct: 30 KKNLVFLGSPQVAASVLDKLLGASGSPESAFQVAAVVTQPPA-AKNRGRKLMPSAVAQLA 88
Query: 56 QEFSLP----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
+ P + DV + AYG ++PQ+ L+ G N H S
Sbjct: 89 LDRGFPEELIFTPERAREESFLSALKEVEPDVCITAAYGNILPQKFLDIPSCGTVNIHPS 148
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLP +RGAAP+QRA+ G ETG+++ + LD GPV + + I L L
Sbjct: 149 LLPLYRGAAPVQRALQDGVAETGVSLAYTVRALDAGPVIACERFSVDECIKAPELLSMLF 208
Query: 172 VLCAHAMVEAMDKLEQN--NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL 229
L + ++ + + PQ ++ T A K++ E+ ++F A+ +HN +RA
Sbjct: 209 HLGSKLLINELPSILDGSAKDKAQPQDDSKATLAPKLNSEESWLSFDEEAKVLHNKVRAF 268
Query: 230 SPFPGAWLEMMIGNKHERIKLLESQLVEGEG-----KPG---EVI--NPNFTIAC-SQGA 278
+ +PG ++ + N++ +LE +++ + K G E++ + I C
Sbjct: 269 AGWPGTRAKLQLINQNSVPDVLEIKVISTKVSTSCVKVGDENEILFSGSSLLIPCSGSTW 328
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ ++ LQ G +V DF G G +
Sbjct: 329 LEVLELQLPGKKVTKAQDFWNGLR---GQKL 356
>gi|32477750|ref|NP_870744.1| methionyl-tRNA formyltransferase [Rhodopirellula baltica SH 1]
gi|39931220|sp|Q7UHZ6|FMT_RHOBA RecName: Full=Methionyl-tRNA formyltransferase
gi|32448304|emb|CAD77821.1| methionyl-tRNA formyltransferase [Rhodopirellula baltica SH 1]
Length = 335
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 90/325 (27%), Positives = 146/325 (44%), Gaps = 18/325 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS----SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
+LR V MGT FAV + +A+ I V+ +P P RG V + A+
Sbjct: 9 SLRYVLMGTGPFAVPSFEAIRQQMDSTGDQIARVFVRPLPPVKSRGG-PPPQPVREWAES 67
Query: 58 FSLPALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
LP P + E NAD+ VV YG ++ L + +LG N H SLLP +
Sbjct: 68 HGLPVDAPASINDPETIASLTELNADLLVVCDYGQILKPDALQSARLGGINLHGSLLPAY 127
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAP+QRA+++GD ETG++++ M LD GP+ R PI + + L+ LS +
Sbjct: 128 RGAAPVQRALLSGDRETGVSVIHMTPRLDGGPIVASRTTPIRDDETSGELEVRLSEIGVD 187
Query: 177 AMV------EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
A ++ L+ + PQ ++ A ++SK E ++++ + + +R +
Sbjct: 188 ATREAIGLLRTIESLDSHGPLGEPQDPAKVSKAPRLSKAEAQIDWSATGREIDCLVRGMQ 247
Query: 231 PFPGAWLEMMIGNKHERIKLL-----ESQLVEGEGKPGEVIN-PNFTIACSQGAVRIMRL 284
P+P A+ ++ +++ G V+ I C G V I RL
Sbjct: 248 PWPVAFTHTVVNENKPPLRVAIRGVRTETYAADASNIGRVMEHEGLAIGCGDGQVVIERL 307
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
Q AG + + DF G + G +
Sbjct: 308 QPAGKKEMSGLDFKRGHRLTAGQQL 332
>gi|257457588|ref|ZP_05622755.1| methionyl-tRNA formyltransferase [Treponema vincentii ATCC 35580]
gi|257444974|gb|EEV20050.1| methionyl-tRNA formyltransferase [Treponema vincentii ATCC 35580]
Length = 325
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 88/325 (27%), Positives = 147/325 (45%), Gaps = 24/325 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS--- 59
+ V F GT E A+ LQA ++ ++ + V T PP G RG K SA+ + E
Sbjct: 1 MNVFFAGTPECAIPALQA-IAKTYPLAGVLTAPPARVG-RGKKYADSAIAQAVAELKERG 58
Query: 60 -----LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
+P P KL + E + ++ V AYG + + L G N H SLLP
Sbjct: 59 VIAQEVPVFTPEKLNADFREAIAALRPNIMVCFAYGKIFGPKTLALFPHGALNIHPSLLP 118
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
RWRG +P+ AI+AGDN TG+ + M + +D G + +++P+ + T L + L
Sbjct: 119 RWRGPSPVPAAILAGDNITGVTVQYMAQEMDAGDIVMQKELPVGPSDTTETLLTRCAELG 178
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
A +V+A+ +E +++ PQ +Y I K + + A + IRA +P+PG
Sbjct: 179 ASLIVQALKMVETDSVNAVPQNHEAASYCTLIQKDSGLLCWQDDAGAIDRKIRAYTPWPG 238
Query: 235 AWLEMMIGNKHERIKLLESQLVEGEG------KPGEVI----NPNFTIACSQGAVRIMRL 284
A+ M ++ ++++ G PG V+ + +G + + L
Sbjct: 239 AFTYWMGS----KLSIIQAHPYTGNAAAESPETPGLVLGIDKREGVLVQTGKGILAVQVL 294
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
Q+ + + DFL G IG +
Sbjct: 295 QKETKKAMQWKDFLNGAAGFIGTTL 319
>gi|261749641|ref|YP_003257327.1| methionyl-tRNA formyltransferase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497734|gb|ACX84184.1| Methionyl-tRNA formyltransferase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 319
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 78/316 (24%), Positives = 155/316 (49%), Gaps = 13/316 (4%)
Query: 1 MTL--RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M R+VF+G++ F+ +L+ L + ++IV + T P P RR K V + A E
Sbjct: 1 MKKFPRIVFIGSTPFSFFSLKELYTRKYNIVGIITTPDPPFFRR--KKNFFPVKEYALEN 58
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P L + + + +V ++P+ I + K+G +N HASLLP+++G
Sbjct: 59 HIPLLQPKNLLDSSFLRNFTMWKADIQIVVSFRILPREIWSYPKMGTFNLHASLLPQYKG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPI AI+ G+ +TG+ + +D+G + ++V + + L+ ++ + +
Sbjct: 119 AAPINWAIINGEKKTGLTTFFISNQVDSGNILLQKEVEVKRDETAGELENKIKKISGSLV 178
Query: 179 VEAMDKLEQNNLPLSPQI---ENGITYAEKISKGETRVNFCRS-AENVHNHIRALSPFPG 234
++ ++ + Q + PQ + + YA KIS + ++++ + + ++N IR LSP+P
Sbjct: 179 LKTLEGILQKKIKPIPQKIISSSLLRYAPKISPIDCKIHWEETSIDVIYNKIRGLSPYPS 238
Query: 235 AWLEMMIG-NKHERIKLLESQLV--EGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGG 289
AW + N+ R K+ + + G VI + I+ +G + ++ Q G
Sbjct: 239 AWTTLFFKENRFVRFKIFFVKKMRKAHNFPIGLVILSSWEMKISVKEGFISVLEGQIEGK 298
Query: 290 RVLDIGDFLLGCPVII 305
+ + I + + G +
Sbjct: 299 KKMSIKNLINGIKIRK 314
>gi|88856228|ref|ZP_01130888.1| methionyl-tRNA formyltransferase [marine actinobacterium PHSC20C1]
gi|88814547|gb|EAR24409.1| methionyl-tRNA formyltransferase [marine actinobacterium PHSC20C1]
Length = 309
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 91/305 (29%), Positives = 148/305 (48%), Gaps = 10/305 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F G+ E AV +L AL+ + H I V T+ GRR + V +A+ +
Sbjct: 3 SLRLLFAGSPEVAVPSLDALLETDHEIAGVLTRTDSAQGRR-RVMTPTPVAARAEAVDID 61
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ +L E + D+ V+VAYG ++P+ +L +LG+ N H SLLP+WRGAAP
Sbjct: 62 VIRANRLDSTASEAISDLDVDLGVIVAYGGLVPKDVLAIPRLGWINLHFSLLPQWRGAAP 121
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+QRAIMAGD G + ++ + LD G V PI + L Q+LSV A +V+
Sbjct: 122 VQRAIMAGDALAGATVFQLVEQLDAGDVFATMTQPIGAQQTAGALLQQLSVSGAGLLVQV 181
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D L + Q + S + + + R A +HNHIR ++P PGA +
Sbjct: 182 VDSLADGSAHAVAQSGEITLAPKL-SLADGTIEWTRPAAAIHNHIRGVTPEPGASTSVGG 240
Query: 242 GNKHERIKLLESQLVEGE--GKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+R+K+LE+ + G V +N + + + ++R+ G +D +
Sbjct: 241 ----KRLKVLEAAIARDTPALPAGRVAFVNKKVFVGTASEPIELLRVHPEGRNAMDAAAW 296
Query: 298 LLGCP 302
G
Sbjct: 297 WRGLN 301
>gi|213019587|ref|ZP_03335393.1| methionyl-tRNA formyltransferase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995009|gb|EEB55651.1| methionyl-tRNA formyltransferase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 294
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 95/296 (32%), Positives = 146/296 (49%), Gaps = 12/296 (4%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MG+ FAV L L+ +V+VYT+ P+P+GRR + S VH A++ + P
Sbjct: 1 MGSPGFAVGALNLLLKLQSEVVAVYTKAPKPSGRR-QRLTKSPVHIVAEKSDIEVCTPAS 59
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
E E+F +F DVAVV AYGL++P+ ILN K G N H SLLPRWRGAAPIQ I
Sbjct: 60 LKSSIEQEKFGNFKPDVAVVAAYGLILPKEILNIPKYGCINIHPSLLPRWRGAAPIQHTI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+AGD ETG++IM++D+ LD+GP+ I + + L + + + K+
Sbjct: 120 LAGDQETGVSIMQLDEGLDSGPILKQ----KKFLIEKSDNYKTLYDKLSELGSDLLLKVL 175
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
P ++ + ++ + E + ++A P +E ++
Sbjct: 176 NEIEKQVPLKQSDNDACYADKVKDYKIYASDACEIAYRKVKAFYPKAFIKVE------NK 229
Query: 247 RIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
RIK+L+++ GE+IN N I+ G + +Q G DI DF+ G
Sbjct: 230 RIKILDAEFEAFTSGQGEIINDNMHISLKGGTLIPKVVQMEGRNPCDIKDFVRGLK 285
>gi|323359994|ref|YP_004226390.1| methionyl-tRNA formyltransferase [Microbacterium testaceum StLB037]
gi|323276365|dbj|BAJ76510.1| methionyl-tRNA formyltransferase [Microbacterium testaceum StLB037]
Length = 305
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 88/303 (29%), Positives = 142/303 (46%), Gaps = 9/303 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF GT AV +L+AL S H I +V T+ P G R S V + A E LP
Sbjct: 1 MRLVFAGTPAVAVPSLRALASGPHEIAAVLTRGDAPLG-RKRVLTPSPVAQAADELGLPL 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ +L E + D+ V+VAYG ++ + +L+ G+ N H SLLPRWRGAAP+
Sbjct: 60 IKADRLDAEATAAVAALEPDLGVIVAYGGLVREPLLSTPGHGWINLHFSLLPRWRGAAPV 119
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRA++AGD TG ++ ++ LD G V + I + +A + L+ + A + +
Sbjct: 120 QRALIAGDRVTGASVFQLVAALDAGDVFAEERYEIPAGATSAEVLDALADIGAPLLARVV 179
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D + +PQ + S + ++F R A+ + + I ++P PGA +
Sbjct: 180 DGIADGTAVSTPQQGEPTLAPKL-SLEDGLLDFTRGADTLLHRIAGVTPEPGAHTTLDGA 238
Query: 243 NKHERIKLLE-SQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
R K+L + PG V + + +R+ +Q AG + GD+
Sbjct: 239 ----RFKVLRAAPADAPPLPPGRVAASGKDVIVGTGTAPLRLETVQPAGKGAMAAGDWFR 294
Query: 300 GCP 302
G
Sbjct: 295 GLR 297
>gi|239818069|ref|YP_002946979.1| methionyl-tRNA formyltransferase [Variovorax paradoxus S110]
gi|259647286|sp|C5CQE1|FMT_VARPS RecName: Full=Methionyl-tRNA formyltransferase
gi|239804646|gb|ACS21713.1| methionyl-tRNA formyltransferase [Variovorax paradoxus S110]
Length = 318
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 112/331 (33%), Positives = 153/331 (46%), Gaps = 37/331 (11%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+VVF GT EFA A L+A+ ++ H I V +QP RPAG RG+K S V + A P
Sbjct: 3 PLKVVFAGTPEFARAALEAIAAAGHEIALVLSQPDRPAG-RGMKLQASPVKQCAVAHGWP 61
Query: 62 ALV---------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
+ E L+ DV VV AYGL++PQ +L+ G N HASL
Sbjct: 62 VAQPRSLRLDGKYPQDAAAAREALLAARPDVMVVAAYGLILPQWVLDLPVHGCLNIHASL 121
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPI RAI AGD +TGI IM+MD LDTG + V I S+ + +
Sbjct: 122 LPRWRGAAPIHRAIEAGDAQTGITIMQMDAGLDTGDMLLREAVDIGSDTTARLHDRLAEL 181
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ D +PQ G+TYA K+ K E ++++ + A+ + IRA PF
Sbjct: 182 GGRLIVQALADIGRLA---RTPQPAEGVTYASKVEKHEAQIDWNQPADAIVRRIRAFDPF 238
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI-------------NPNFTIACSQGAV 279
PGA ++ G + + E PG ++ +
Sbjct: 239 PGANS-LLDGETIKLWAAHAAPPAEVSAAPGTLLAVSDAGVAVAAAGSVVMA-------- 289
Query: 280 RIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
LQR GG+ L + DFL G + G G
Sbjct: 290 --TELQRPGGKRLAVADFLRGFDLKPGQRFG 318
>gi|288574971|ref|ZP_06393328.1| methionyl-tRNA formyltransferase [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570712|gb|EFC92269.1| methionyl-tRNA formyltransferase [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 311
Score = 123 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 93/310 (30%), Positives = 145/310 (46%), Gaps = 11/310 (3%)
Query: 7 FMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
FMGT FA L +V + V T PPR GRRGL + V A E SL
Sbjct: 5 FMGTGRFASLCLSRIVDLNLIPELVVTMPPRRGGRRGLAETPTPVDVLATERSLNVHRSI 64
Query: 67 KLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
+ + ++ S V +V+ +G + + L+ + G N H S LP +RGAAP+QR
Sbjct: 65 DVNSDRALLDRMESNGPSVILVIDFGQKVGEPFLSTPEYGCLNVHPSALPLYRGAAPVQR 124
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
AIM G ETG+ + ++ + +D GP+ + I S L L+ + + +
Sbjct: 125 AIMDGAKETGVTVFRLVEKMDAGPILISQSTEIDSEETGGELLFRLAYIGGDLLNRGVHL 184
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
L++ + L Q TYA KI K E +++ SA HN RAL+P PGA+
Sbjct: 185 LKEKGISLQDQDHLKATYAHKIDKAEALLSWEMSAVAFHNTTRALNPTPGAFTFFRD--- 241
Query: 245 HERIKLLESQLVEGEGK----PGEVINPNF-TIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+R+K+ + L E + + F + CS G+V++M +Q G R +D D+
Sbjct: 242 -KRLKIWRTALTEKDLDDVVGAVRIDEEGFPVVRCSSGSVKLMEVQPEGRRAIDGKDWFK 300
Query: 300 GCPVIIGCIV 309
G + G ++
Sbjct: 301 GSHLSEGDLL 310
>gi|254431598|ref|ZP_05045301.1| methionyl-tRNA formyltransferase [Cyanobium sp. PCC 7001]
gi|197626051|gb|EDY38610.1| methionyl-tRNA formyltransferase [Cyanobium sp. PCC 7001]
Length = 344
Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 105/344 (30%), Positives = 161/344 (46%), Gaps = 41/344 (11%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT +AV +L+ALV + H++V V +QP R G RG + V S V ++A+ LP
Sbjct: 1 MRILFWGTPAYAVPSLEALVEAGHTVVGVVSQPDRRRG-RGSQLVASPVKQRAEALGLPV 59
Query: 63 LVPTKLGQEEYEQFLSFNAD--VAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ Q+ Q D ++VVVA+G ++P +L LG +NGH SLLPRWRGAA
Sbjct: 60 FTPGRIRQDPGTQAELAALDAEMSVVVAFGQILPPEVLAQPPLGCWNGHGSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ +++AGD ETG+ IM M+ LDTGPV R++ I N L L+ L A ++E
Sbjct: 120 PIQWSLLAGDPETGVGIMAMEAGLDTGPVLLERRLTIGLLENAEDLAGRLAALTADLLLE 179
Query: 181 AMDKL----------EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
A+ ++ L + PQ E+G+TYA ++ K + V++ A +H + AL
Sbjct: 180 ALPRIAAAGPGPEAERWRRLGVRPQSEDGMTYARQLRKEDAVVDWSLPALEIHRRVMALY 239
Query: 231 P-----FPGAWLEMMIGNKHERIKLLESQLVEGEG-------------------KPGEVI 266
P + G L+++ E PGE
Sbjct: 240 PGAHTLWNGRRLKLLATEPLVERLRGELSPEAAALCGRWGAGGGGAEAGEVLAVAPGE-- 297
Query: 267 NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+A + + Q G R + G +G
Sbjct: 298 --GLVLATGGCPLLLRDAQLEGKRPCQGQALIQQLNARPGDRMG 339
>gi|148978498|ref|ZP_01814972.1| methionyl-tRNA formyltransferase [Vibrionales bacterium SWAT-3]
gi|145962405|gb|EDK27685.1| methionyl-tRNA formyltransferase [Vibrionales bacterium SWAT-3]
Length = 230
Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 98/228 (42%), Positives = 140/228 (61%), Gaps = 2/228 (0%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+VF GT +FA L AL+SS H +++VYTQP RPAG RG K S V A E ++P
Sbjct: 4 SLRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAG-RGKKLTASPVKNIALENNIP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E +Q L+ D+ VVVAYGL++PQ +L+ +LG N H S+LPRWRGAA
Sbjct: 63 VYQPENFKSDEAKQELADLNADIMVVVAYGLLLPQVVLDTPRLGCINVHGSILPRWRGAA 122
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQR+I AGD ETG+ IM+MD LDTG + + +PI + +A + ++L+ L A+VE
Sbjct: 123 PIQRSIWAGDKETGVTIMQMDIGLDTGDMLSIATLPIEATDTSASMYEKLAGLGPDALVE 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRA 228
+ + Q + YA+K+SK E R+N+ A ++ +RA
Sbjct: 183 CLADIASGKAVAEKQDDELANYAKKLSKEEARINWSDDAAHIERCVRA 230
>gi|188527924|ref|YP_001910611.1| methionyl-tRNA formyltransferase [Helicobacter pylori Shi470]
gi|188144164|gb|ACD48581.1| methionyl-tRNA formyltransferase [Helicobacter pylori Shi470]
Length = 298
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 83/305 (27%), Positives = 137/305 (44%), Gaps = 11/305 (3%)
Query: 8 MGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--SLPALV 64
MGT FA L+ALV +V ++TQ +P G R + E ++P
Sbjct: 1 MGTPGFAEVILRALVKDKEIEVVGLFTQMDKPFG-RKKELKAPETKTYILENHLNIPIFQ 59
Query: 65 PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
P L + E + + D VVVAYG ++P+ +L+ N HASLLP++RGA+PI
Sbjct: 60 PQSLKESEVQILKNLKPDFIVVVAYGKILPKEVLSIA--PCINVHASLLPKYRGASPIHE 117
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
I+ D GI+ M MD LD+G + ++ L +L+ + A ++ +
Sbjct: 118 MILNDDKIYGISTMLMDVGLDSGDILESASFLREEYLDLDALNLKLAHMGAALLLSTLKN 177
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
PQ ++ +KI+K + V F + + S + + K
Sbjct: 178 FSSITRK--PQDHAQASFCKKITKADGLVGFKDAKSLFLKSLAFKS---WPEIFLENSLK 232
Query: 245 HERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVI 304
++L+E++ EG+ E+ + C +G+VRI RLQ G + L D+L G +
Sbjct: 233 LLGVELVENEKSHKEGEILEIDEKGVLVGCLKGSVRIARLQAVGKKPLKAKDYLNGKRLK 292
Query: 305 IGCIV 309
G I+
Sbjct: 293 AGGIL 297
>gi|254512965|ref|ZP_05125031.1| 10-formyltetrahydrofolate dehydrogenase [Rhodobacteraceae bacterium
KLH11]
gi|221532964|gb|EEE35959.1| 10-formyltetrahydrofolate dehydrogenase [Rhodobacteraceae bacterium
KLH11]
Length = 305
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 73/314 (23%), Positives = 123/314 (39%), Gaps = 16/314 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R++ MG F L L+ + +V+VY +P + + + + A E LP
Sbjct: 1 MRLIVMGQQAFGKDVLAKLLETGTDEVVAVYCEPDKDG------KPVDPIKEFALEKGLP 54
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P +E SFNAD+ V+ + +P+ + G H SLLP RG +
Sbjct: 55 VHQPANFDDQEALDLLASFNADLMVMAFVNVFVPEAARDTPTHGSICFHPSLLPLHRGPS 114
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV- 179
+ I+ G ++G + LD G + I N L + A V
Sbjct: 115 AVNWPIIMGSTKSGYSWFYPSDGLDEGDSLLQWECEIGPNDTVIDLYFKKIYPHAVDSVL 174
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
D N P E+ TY + +K R+ + R V+N IR +P PGAW +
Sbjct: 175 TVCDLYRDGNPPRIVPDESEATYERRCNKNHARIEWHRPVNQVYNLIRGTNPAPGAWTTL 234
Query: 240 MIGNKHERIKLLESQLVEGEGKPG---EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ + V G+G G E+ + ++ C G + I R++ AG + +
Sbjct: 235 DGAELG----VFDCVPVPGDGISGRVREITDEGVSVQCVGGRILIKRVRPAGEGKVAASE 290
Query: 297 FLLGCPVIIGCIVG 310
+ + G +G
Sbjct: 291 WAASVGLEPGATLG 304
>gi|325849125|ref|ZP_08170617.1| methionyl-tRNA formyltransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480370|gb|EGC83433.1| methionyl-tRNA formyltransferase [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 304
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 76/309 (24%), Positives = 146/309 (47%), Gaps = 13/309 (4%)
Query: 8 MGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MG+ +F++ TL L + + ++ V + + R K + + + A + +L L P
Sbjct: 1 MGSPKFSLETLDILNKNENINVSLVVSGKDKKRNR--NKFKPTVIKQYALDNNLEVLTPD 58
Query: 67 KLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
+ +E+ D VVVA+G +I + +L + N H S LP++RG +P+Q
Sbjct: 59 SVNTDEFISILKEKEIDFIVVVAFGQLIKENLLKEFENKIINLHPSSLPKYRGPSPVQFT 118
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
++ GD +T + M ++K +D+G + + ++V I+ + L ++LS + + ++ ++
Sbjct: 119 LLNGDKKTHASAMLIEKGMDSGDILYQKEVDINDEDDFTSLSEKLSKIGSQTILYSLLNY 178
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKH 245
Q + T+ +KISK +++F E++ N IRA FP A+
Sbjct: 179 NDLIEKSIKQDDENATFTKKISKDMGKIDFSNDKEDIINKIRAFVEFPKAYFSYK----R 234
Query: 246 ERIKLLESQLVE-GEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
E +K+L++ V+ K V I C G ++I ++Q G + +D FLLG
Sbjct: 235 ENVKILKASPVQIENPKISFVYKANKEDKIIIGCKNGGIKIEKIQFPGKKAMDTKSFLLG 294
Query: 301 CPVIIGCIV 309
G +
Sbjct: 295 NDFEEGIYL 303
>gi|297182176|gb|ADI18347.1| methionyl-tRNA formyltransferase [uncultured actinobacterium
HF4000_04C13]
Length = 296
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 98/309 (31%), Positives = 155/309 (50%), Gaps = 26/309 (8%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R+V++G E AVA L AL + H + V T P R GRR + + V +A E +P
Sbjct: 11 RLVYLGNPEVAVAPLTALHEAGHDVALVVTSPDRRRGRR-SEPTPTPVGARALELGIPV- 68
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+ + AD+ VVVAYG +IP IL + N H SLLPRWRGAAP++
Sbjct: 69 ------AHDLSAVVDSGADLGVVVAYGRIIPVDILARVPM--LNLHFSLLPRWRGAAPVE 120
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
RA++AGD TG+ +M++ + LD G V +VPI S GL++ L+VL A + +D
Sbjct: 121 RALLAGDQTTGVCLMEVAEGLDVGGVHARVEVPIRSTDTADGLRERLAVLGARLL---VD 177
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
L +PQ E T+A K+ + + +++ RSA + +R GAW G+
Sbjct: 178 SLAAGLSAPAPQ-EGIATHAHKLHREDLALDWDRSAPELERLVRVG----GAWTTFRDGD 232
Query: 244 KHERIKLLESQLVEG--EGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+K+ +++ + G PG ++ +A GA+R++ +Q A + +L G
Sbjct: 233 ----LKVWRAEVSDEVVPGPPGSIVGD--LVATGVGALRLLEVQPASRSRMGASAWLGGA 286
Query: 302 PVIIGCIVG 310
+ +G
Sbjct: 287 RPVADERLG 295
>gi|145300198|ref|YP_001143039.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|166988212|sp|A4SQW9|ARNA_AERS4 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|142852970|gb|ABO91291.1| Bifunctional polymyxin resistance protein ArnA [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 663
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 68/313 (21%), Positives = 139/313 (44%), Gaps = 13/313 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+ + + I +V+T P+ R +V + E LP
Sbjct: 1 MKAVVFAYHDIGCTGIEALLEAGYEIQAVFTHADDPSENR----FFGSVAQLCAEHGLPV 56
Query: 63 LVPTKLGQEEYEQFLSFNADVA-VVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + + A A Y ++ Q IL+ G +N H SLLP +RG AP
Sbjct: 57 YSPEDVNHPLWVEHIKGLAPQALFSFYYRHMLKQEILDIPSAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I ++ G+ TGI + +M D G + + V I L ++ + +
Sbjct: 117 INWCLVNGEQLTGITLHQMTMRPDAGAIVAQQAVAIKWADTALTLHGKVRLAAKALLDAE 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ KL ++ L+PQ E+ +Y + + + +++ +SA +++N +R P+PGA+
Sbjct: 177 LPKLRTGDISLTPQDESRASYYGRRTPADGELHWDKSARDLYNLVRAVTQPYPGAFSFAG 236
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ + ++ + + + PG +++ + IAC +G + I+ Q GG +
Sbjct: 237 DR----KLTVWKATHIAQDSDMLPGTILSQDPLRIACGEGVLEIVAGQAEGGLYVRGAQL 292
Query: 298 LLGCPVIIGCIVG 310
++ G +G
Sbjct: 293 ARELGLVAGMRLG 305
>gi|327543077|gb|EGF29519.1| methionyl-tRNA formyltransferase [Rhodopirellula baltica WH47]
Length = 335
Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats.
Identities = 90/325 (27%), Positives = 147/325 (45%), Gaps = 18/325 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS----SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
+LR V MGT FAV + +A+ I V+ +P P RG V + A+
Sbjct: 9 SLRYVLMGTGPFAVPSFEAIRQQMDSTGDQIARVFVRPLPPVKSRGG-PPPQPVREWAES 67
Query: 58 FSLPALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
LP P + E NAD+ VV YG ++ L + +LG N H SLLP +
Sbjct: 68 HDLPVDAPASINDPETIASLTELNADLLVVCDYGQILKPDALQSARLGGINLHGSLLPAY 127
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL--- 173
RGAAP+QRA+++GD ETG++++ M LD GP+ R PI + + L+ LS +
Sbjct: 128 RGAAPVQRALLSGDRETGVSVIHMTPRLDGGPIVASRTTPIRDDETSGELEVRLSEIGVD 187
Query: 174 ---CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
A ++ + L+ + PQ ++ A ++SK E ++++ + + +R +
Sbjct: 188 ATLEAIGLLRTIQSLDSHGPLGEPQDPAKVSKAPRLSKAEAQIDWSATGREIDCLVRGMQ 247
Query: 231 PFPGAWLEMMIGNKHERIKLL-----ESQLVEGEGKPGEVIN-PNFTIACSQGAVRIMRL 284
P+P A+ ++ +++ G V+ I C G V I RL
Sbjct: 248 PWPVAFTHAVVNENKPPLRVAIRAVRTETYAADASNIGRVMEHEGLAIGCGDGQVVIERL 307
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
Q AG + + DF G + G +
Sbjct: 308 QPAGKKEMSGLDFKRGHRLTAGQQL 332
>gi|194477283|ref|YP_002049462.1| methionyl-tRNA formyltransferase [Paulinella chromatophora]
gi|171192290|gb|ACB43252.1| methionyl-tRNA formyltransferase [Paulinella chromatophora]
Length = 349
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 141/322 (43%), Gaps = 36/322 (11%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VF GT +AVA+L+ALV + H +V+V TQP R RG + S V +A E L
Sbjct: 1 MKIVFWGTPNYAVASLEALVKAGHDLVAVVTQPDRRR-ARGKLLLSSPVKVRALELGLTV 59
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ + Q S AD+ +VVA+G ++P IL +LG +NGH SLLPRWRGA
Sbjct: 60 YTPKQISSDIDIQTRLASLEADIYIVVAFGQILPFEILVQPRLGCWNGHGSLLPRWRGAG 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ ++ GD++TG+ I+ M LDTGPV + + I N N L Q LS L +VE
Sbjct: 120 PIQWSVTEGDSQTGVCIIAMGLDLDTGPVLIEQSIDIGFNENAENLGQRLSQLTGELLVE 179
Query: 181 AMDKLEQNNL----PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
AM + Q+ + I+ + + G +
Sbjct: 180 AMPLIATVGQGSESERFKQLAMRTQVEKDITYAHMLTKQDFIIMWNRSALAIHRQVMGFY 239
Query: 237 LEMMIGNKHERIKLLESQLVEGEGK-------------------------PGEVINP--- 268
E + +R+K+L ++ ++ PGE++
Sbjct: 240 PEAFSYWRGKRLKVLSTEPLDPSLSCQLTKEAIQIIHQWRLRMNPDQRVIPGEILATYEG 299
Query: 269 -NFTIACSQGAVRIMRLQRAGG 289
++ + I + Q
Sbjct: 300 VGMVVSTGDHPILIRKAQLEDK 321
>gi|242054043|ref|XP_002456167.1| hypothetical protein SORBIDRAFT_03g031530 [Sorghum bicolor]
gi|241928142|gb|EES01287.1| hypothetical protein SORBIDRAFT_03g031530 [Sorghum bicolor]
Length = 360
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 88/331 (26%), Positives = 151/331 (45%), Gaps = 27/331 (8%)
Query: 2 TLRVVFMGTSEFAVATLQALV------SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
+VF+G+ + A + L L+ S+ + +V TQPP A RG K + SAV + A
Sbjct: 30 KKNLVFLGSPQVAASVLDKLLGASGSPESAFKVAAVVTQPPA-AKNRGRKLLPSAVAQLA 88
Query: 56 QEFSLP----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
+ P + DV V AYG ++PQ+ L+ G N H S
Sbjct: 89 LDRGFPEELIFTPERAREESFLSALKEVEPDVCVTAAYGNILPQKFLDIPSCGTVNIHPS 148
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLP +RGAAP+QRA+ G ETG+++ + LD+GPV + + I L L
Sbjct: 149 LLPLYRGAAPVQRALQDGVAETGVSLAYTVRALDSGPVIACERFSVDECIKAPELLSILF 208
Query: 172 VLCAHAMVEAMDKLEQN--NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL 229
L + ++ + + PQ ++ T A K++ E+ ++F + A+ +HN +RA
Sbjct: 209 DLGSKLLINELPSILDGSAKEKAQPQDDSKATLAPKLNSEESWLSFDQEAKVLHNKVRAF 268
Query: 230 SPFPGAWLEMMIGNKHERIKLLESQLVEGEG-----KPG---EVI--NPNFTIAC-SQGA 278
+ +PG ++ + N++ +LE +++ + K G E++ + I C
Sbjct: 269 AGWPGTRAKLQLVNQNSVPDVLEIKVISTKVSTSCVKAGDENEILFSGSSLLIPCSGSTW 328
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ ++ LQ G +V DF G G +
Sbjct: 329 LEVLELQLPGKKVTKAQDFWNGLR---GQKL 356
>gi|184200811|ref|YP_001855018.1| methionyl-tRNA formyltransferase [Kocuria rhizophila DC2201]
gi|183581041|dbj|BAG29512.1| methionyl-tRNA formyltransferase [Kocuria rhizophila DC2201]
Length = 312
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 85/303 (28%), Positives = 137/303 (45%), Gaps = 11/303 (3%)
Query: 5 VVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+V+ GT E AVA L+AL + +V T+ P G R SAV ++A+E LP L
Sbjct: 8 IVYAGTPETAVAPLEALHEDPRIEVRAVLTREDAPVG-RKRVMTPSAVGRRAEELGLPVL 66
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
++ E + + A + VVAYG ++P+ L+ + G+ N H SLLP+WRGAAP+Q
Sbjct: 67 KANRVTPEVQQALRAKGARIGAVVAYGALLPRPALDVFEHGWINLHFSLLPQWRGAAPVQ 126
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
RA+MAGD G + +D+ +DTGPV + + L+ + + E++
Sbjct: 127 RALMAGDTVVGASTFVLDEGMDTGPVVGTLTDKVREEDTAGTVLARLAREGSPLLAESLL 186
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
+ + Q + + + A V +H+R ++P PGAW E
Sbjct: 187 GVASEAVHPEAQRGEPSAAPKLTGADAR-ITWQHPAVAVAHHVRGVTPEPGAWTEFEG-- 243
Query: 244 KHERIKLLESQLVEG--EGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+R+K+ G PG V+ AV + R+Q G + + D+
Sbjct: 244 --QRLKVDRVVPAPGVTGIAPGHVVIREKRVYAGTGSYAVELTRVQPGGKKPMAALDWAR 301
Query: 300 GCP 302
G
Sbjct: 302 GTQ 304
>gi|325474195|gb|EGC77383.1| methionyl-tRNA formyltransferase [Treponema denticola F0402]
Length = 322
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 90/319 (28%), Positives = 143/319 (44%), Gaps = 25/319 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLS----AVHKKAQE- 57
+R++F GT AV L L++ + V T PP PAG R K S AV + +E
Sbjct: 1 MRILFAGTPSCAVPALN-LIAREFDLCGVLTNPPAPAG-RNKKMQDSDTALAVKELIKEG 58
Query: 58 ---FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
+ P L P KL ++ + ++ V AYG + + + LG N H SLLP
Sbjct: 59 VLPENFPILTPQKLDDNFRKELEALKPELLVCFAYGKIFGPKTMALFPLGGINIHPSLLP 118
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
RWRG AP+ AI+AGD TGI I + + D G + ++P++ + T L + + C
Sbjct: 119 RWRGCAPVPAAILAGDKLTGITIQTLAQKTDCGSILGQLEIPLNDSETTESLLADCADKC 178
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
+ + + E PQ E Y + K + +++ + AE + IRA +P+PG
Sbjct: 179 CPLLRDVLSDFENKLKQARPQEEAKALYCSMLKKEDGLIDWSKPAEEIERKIRAFTPWPG 238
Query: 235 AWLEMMIGNKHERIKLLESQLVE-------GEGKPGEVI----NPNFTIACSQGAVRIMR 283
+ E+I ++E+ L E K G ++ I G + +
Sbjct: 239 CFTF----KNSEKISIIEANLYEDASNEMTKNKKFGTILGTDKKCGILIQTGNGILAVSV 294
Query: 284 LQRAGGRVLDIGDFLLGCP 302
LQ+ + L+ DFL G P
Sbjct: 295 LQKQAKKKLEWKDFLNGSP 313
>gi|237751992|ref|ZP_04582472.1| methionyl-tRNA formyltransferase [Helicobacter winghamensis ATCC
BAA-430]
gi|229376559|gb|EEO26650.1| methionyl-tRNA formyltransferase [Helicobacter winghamensis ATCC
BAA-430]
Length = 300
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 65/309 (21%), Positives = 134/309 (43%), Gaps = 12/309 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKA--QEFSL 60
+R++FMGT ++A L +L+ H I ++ Q + AG R + A + + +
Sbjct: 1 MRIIFMGTPDYAAVILDSLLE-QHIICALVCQKDKKAG-RDMCLKAPATKELLMLKAPKI 58
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P P L + + D+ +V A+G ++P+++L N HAS+LP++RGA+
Sbjct: 59 PIFQPESLDEAFVADLQALKPDIIIVAAFGKILPKKVLQIA--PCVNLHASILPKFRGAS 116
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ++I+ ++ G+++M+M++ LD G + + V + + +
Sbjct: 117 PIQQSILNKESYFGVSVMQMEEGLDCGDILGFKVVKNTGQNALELFNVLAKLAAELTLEY 176
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + Q A K + + +AL+ + +
Sbjct: 177 L---RRIDFIVPLAQNNAD---ASYCKKIKKEFALVEFDDARMLENKALAYSGWPEIFLR 230
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
G K + +KL + +G+ E+ + CS+G+V I LQ + + +++ G
Sbjct: 231 SGLKLKVLKLDSANGEYKQGEILEITKDGIKVGCSKGSVWIEVLQAPSKKAVGAYEYVQG 290
Query: 301 CPVIIGCIV 309
+ +G I+
Sbjct: 291 KRLKVGNIL 299
>gi|239917584|ref|YP_002957142.1| methionyl-tRNA formyltransferase [Micrococcus luteus NCTC 2665]
gi|239838791|gb|ACS30588.1| methionyl-tRNA formyltransferase [Micrococcus luteus NCTC 2665]
Length = 366
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 91/309 (29%), Positives = 141/309 (45%), Gaps = 18/309 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LRV++ GT E AV L+AL+ S H +V V T+P P GRR S V A+E LP
Sbjct: 6 PLRVLYAGTPETAVPALRALLDSPHEVVGVLTRPDAPVGRR-RVLTPSPVAVTAEEAGLP 64
Query: 62 ALVPTKLGQEEY----EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
L +L E + + ADVAVVVAYG ++P L + G+ N H S LP +R
Sbjct: 65 VLKADRLRGPEGADALQAIRALEADVAVVVAYGALVPAEALQIPRHGWLNLHFSALPAYR 124
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAP+QRA+MAG+ E + ++++ LDTGPV P++++ + +L+
Sbjct: 125 GAAPVQRAVMAGETEIAADVFQLEEGLDTGPVFARLTRPVAADETAGAVLTDLAERGGPL 184
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKI-SKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+++ +D+L +PQ + + G + + P W
Sbjct: 185 VIDVLDRLADGTATATPQRGEPTHAPKLTAADGLVDPARPAAEVAARINGVTPEPGAWGW 244
Query: 237 LEMMIGNKHERIKLLESQLVEG----------EGKPGEVI--NPNFTIACSQGAVRIMRL 284
L G R KL V PG+++ + + GAVR+ R+
Sbjct: 245 LTADDGAAPARFKLDGVAPVRAGDDGWPSDLDAAAPGQILVAAKAAWLRTAGGAVRLSRV 304
Query: 285 QRAGGRVLD 293
Q AG +++
Sbjct: 305 QPAGRKLMP 313
>gi|308234577|ref|ZP_07665314.1| methionyl-tRNA formyltransferase [Atopobium vaginae DSM 15829]
gi|328944366|ref|ZP_08241829.1| methionyl-tRNA formyltransferase [Atopobium vaginae DSM 15829]
gi|327491081|gb|EGF22857.1| methionyl-tRNA formyltransferase [Atopobium vaginae DSM 15829]
Length = 335
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 97/329 (29%), Positives = 142/329 (43%), Gaps = 32/329 (9%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +V+MGT +F+V LQ L H I V T+P G RG K + S V + A SLP
Sbjct: 1 MNIVYMGTPDFSVKPLQELHK-HHKISLVITRPDAVRG-RGKKLIPSPVKQCANALSLPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
T+ + + DV VV AYG +IP +L + N HASLLPRWRGAAPI
Sbjct: 59 REATRFDEGLISAVKACEPDVIVVAAYGCIIPDSVLALPRYTTLNIHASLLPRWRGAAPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI++ D TG++IM + LD G + I + L +LSVL A ++ A+
Sbjct: 119 QRAILSRDEVTGVSIMNVVHELDAGDFCRQASLKI-GAQSLDELTDKLSVLGARELLCAL 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGE----------------------TRVNFCRSAE 220
+E++ L Q E ITYA+KI K E F +
Sbjct: 178 SDIEEHKLVWHKQSETDITYAQKIDKHELLLDPSLSAESNVVRIQASGDAAPARFMMGQK 237
Query: 221 NVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEG-----KPGEVI--NPNFTIA 273
V + A + + E+ + E G V+ N +
Sbjct: 238 GVRALVGCFVGDEVASANAASESALSKSNASENAVSEHAVHAELIPAGAVLIRNHRVFLG 297
Query: 274 CSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
C+ G + ++R++ G + D+ LG
Sbjct: 298 CASGTLELLRVKPDGKSAMSAHDWSLGLH 326
>gi|262091758|gb|ACY25347.1| methionyl-tRNA formyltransferase [uncultured actinobacterium]
Length = 302
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 65/305 (21%), Positives = 114/305 (37%), Gaps = 22/305 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
R+V++GT E AVA LQALV + V T + G RG ++ + V A +P
Sbjct: 10 AKRIVYIGTPEIAVAPLQALVDEGFVVELVVTGVDKRRG-RGSQTTANPVKTAAIALGIP 68
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ L + D + V + N H S LPRWRGAAP
Sbjct: 69 V-------SHDITDVLRLSPDGLLGVVVAFGNIISQEILQHVPMINIHYSALPRWRGAAP 121
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
++RAI++GD T + I+++ + LD G V I + + L+ L L ++
Sbjct: 122 VERAILSGDATTAVCIIQVAEQLDAGDVLASAPCTIQEDDSVETLRNRLGQLALPLLINI 181
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + QI + S+ + + +
Sbjct: 182 CNHGV------TEQIAQIGEVVVARKITAQDLAINWSSSSAQILRQIRVGNAFTFF---- 231
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+R K+ E+ G + + N + +G+V+++ +Q G + D+
Sbjct: 232 --DGKRFKIHEASKSSVNLALGTISVQDGNVLVGSLEGSVQLVTVQPEGKPRVLATDWAR 289
Query: 300 GCPVI 304
G +
Sbjct: 290 GARLS 294
>gi|117617804|ref|YP_855536.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|134035390|sp|A0KGY6|ARNA_AERHH RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|117559211|gb|ABK36159.1| bifunctional polymyxin resistance ArnA protein (Polymyxin
resistanceprotein pmrI) [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 663
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 70/311 (22%), Positives = 134/311 (43%), Gaps = 9/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VV + ++AL+ + + I +V+T P R +V + E +LP
Sbjct: 1 MKVVVFAYHDIGCTGIEALLEAGYEIQAVFTHADDPGENR----FFGSVAQLCAEHNLPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ Y ++ Q IL+ +G +N H SLLP +RG AP
Sbjct: 57 YSPEDVNHPLWIERIRELAPQALFSFYYRNMLKQAILDIPTVGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I ++ G+ ETGI + +M D G + + V I+ + L ++ + + +
Sbjct: 117 INWCLVNGEAETGITLHQMTAKPDAGAIVAQQAVTIADDDTALTLHGKVRLAARALLEQE 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ KL ++ L+PQ E+ +Y + + + +++ R A +HN +R P+PGA+
Sbjct: 177 LPKLRAGDIRLTPQDESKASYYGRRTPADGELHWHRPARELHNLVRAVTQPYPGAFSFAG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+Q + + +PG +++ IAC +G + I+ Q GG +
Sbjct: 237 DRKLTVWKSHWLAQ--QSDKQPGTILSQEPLRIACGEGVLEIVAGQAEGGLYVRGAQLAR 294
Query: 300 GCPVIIGCIVG 310
++ G +G
Sbjct: 295 ELGLVEGMKIG 305
>gi|300870510|ref|YP_003785381.1| methionyl-tRNA formyltransferase [Brachyspira pilosicoli 95/1000]
gi|300688209|gb|ADK30880.1| methionyl-tRNA formyltransferase [Brachyspira pilosicoli 95/1000]
Length = 312
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 81/310 (26%), Positives = 136/310 (43%), Gaps = 5/310 (1%)
Query: 4 RVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
V+ G+++F + L+ + +I +V + R+G + + V A E +L
Sbjct: 3 NVIIAGSTDFTSDCILQLMKLDNVNISAVISTIDTKKDRKG-NIIPNPVTVTALENNLNL 61
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + +++ + NAD +VVAYG ++ +R L+ K+ N H SLLP RGA+P
Sbjct: 62 LKPENINSDDFYNTLVDLNADFFIVVAYGKILSKRTLSIPKIMPMNIHGSLLPILRGASP 121
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
++ A++ G ++TG + KMD LD G V + I SN L + + + E
Sbjct: 122 VEHALLYGFSKTGTTLQKMDYKLDEGDVILQDEFDIDSNWQFNELYDNIKKSGVYILKEF 181
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
D + L Q ++ TY KI K + R+ F +SA +HN +A +P A+
Sbjct: 182 FDDANKYISNLKKQDDSKATYCTKIKKEDGRLYFNKSALELHNMTKAFVRWPVAYCYYND 241
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ + GK + N + G I LQR G + + +FL
Sbjct: 242 VSIKVFKSEYKESSNNSNDFGKIVHIDNEGIHVQALNGIYIIKELQREGKKRQSVKEFLC 301
Query: 300 GCPVIIGCIV 309
G + I
Sbjct: 302 GNKLNINEYF 311
>gi|289705545|ref|ZP_06501937.1| methionyl-tRNA formyltransferase [Micrococcus luteus SK58]
gi|289557774|gb|EFD51073.1| methionyl-tRNA formyltransferase [Micrococcus luteus SK58]
Length = 366
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 91/309 (29%), Positives = 141/309 (45%), Gaps = 18/309 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LRV++ GT E AV L+AL+ S H +V V T+P P GRR S V A+E LP
Sbjct: 6 PLRVLYAGTPETAVPVLRALLDSPHEVVGVLTRPDAPVGRR-RVLTPSPVAVVAEEAGLP 64
Query: 62 ALVPTKLGQEEY----EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
L +L E + + ADVAVVVAYG ++P L + G+ N H S LP +R
Sbjct: 65 VLKADRLRGPEGADALQAMRALEADVAVVVAYGALVPAEALQIPRHGWLNLHFSALPAYR 124
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAP+QRA+MAG+ E + ++++ LDTGPV P++++ + +L+
Sbjct: 125 GAAPVQRAVMAGETEIAADVFQLEEGLDTGPVFARLTRPVAADETAGAVLTDLAERGGPL 184
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKI-SKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+++ +D+L +PQ + + G + + P W
Sbjct: 185 VIDVLDRLADGTATATPQRGAPTHAPKLTAADGLVDPARPAAEVAARINGVTPEPGAWGW 244
Query: 237 LEMMIGNKHERIKLLESQLVEG----------EGKPGEVI--NPNFTIACSQGAVRIMRL 284
L G R KL V PG+++ + + GAVR+ R+
Sbjct: 245 LTAGDGAAPARFKLDGVAPVRAGDDGWPPALDAAVPGQILVAAKAAWLRTAGGAVRLSRV 304
Query: 285 QRAGGRVLD 293
Q AG +++
Sbjct: 305 QPAGRKLMP 313
>gi|33240447|ref|NP_875389.1| methionyl-tRNA formyltransferase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|39931230|sp|Q7VBU5|FMT_PROMA RecName: Full=Methionyl-tRNA formyltransferase
gi|33237975|gb|AAQ00042.1| Methionyl-tRNA formyltransferase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 339
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 94/322 (29%), Positives = 157/322 (48%), Gaps = 39/322 (12%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ ++F GT F V L+ L+ S+H++++V TQP R G RG K + S + +KA E +LP
Sbjct: 1 MNIIFWGTPIFCVPILEKLLKSNHNVLAVITQPDRRRG-RGNKVLPSPIKQKALEENLPI 59
Query: 63 LVPTKLGQEEYEQ--FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + +E+ Q +NAD+ VVVA+G ++P+ +L K G +N HASLLPRWRGAA
Sbjct: 60 YTPVNITKEKDIQAKIKQYNADIFVVVAFGQILPKSVLKLPKYGCWNIHASLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ +I++GD+ETG+ +M M++ LDTG V +K+ + N L Q L L + ++E
Sbjct: 120 PIQWSILSGDSETGVGLMAMEEGLDTGAVLLEKKLKLKLLENAEQLSQRLKDLSCNLIIE 179
Query: 181 AMDKLEQNNLPLS--------PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
++ LE+ Q + TY+ + + + H + L +
Sbjct: 180 GIEILEKVREQSQSLSKLNLTKQEDINRTYSYARLLMKEDYLINWNDSGYNIHKQILGLY 239
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEGE-------------GKPGEVINPN---------- 269
P + + +R+K+LES + + K +IN N
Sbjct: 240 PNCYTYINS----KRLKVLESIPINNKYDEFLDFRYKDIILKSQSIINNNGLIIDIIENI 295
Query: 270 -FTIACSQGAVRIMRLQRAGGR 290
+ + I +++ G +
Sbjct: 296 GIIVQTKDVPLLITKVKLEGKK 317
>gi|116074909|ref|ZP_01472170.1| methionyl-tRNA formyltransferase [Synechococcus sp. RS9916]
gi|116068131|gb|EAU73884.1| methionyl-tRNA formyltransferase [Synechococcus sp. RS9916]
Length = 347
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 103/326 (31%), Positives = 154/326 (47%), Gaps = 39/326 (11%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++++ GT +AV TLQAL + H+IV V TQP R G RG + V S V A E +P
Sbjct: 1 MKILYWGTPAYAVPTLQALHQAGHAIVGVVTQPDRRRG-RGKQLVPSPVKTAALELGIPV 59
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ +E Q AD +VVVA+G ++P+ +L LG +NGH SLLPRWRGA
Sbjct: 60 FTPERIRKEPDCQAELARLGADCSVVVAFGQILPKDVLEQPPLGCWNGHGSLLPRWRGAG 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ ++M GD TG+ +M M++ LDTGPV +PI N L LS L A MV+
Sbjct: 120 PIQWSLMEGDEATGVGVMAMEEGLDTGPVLLEEALPIGVRENAESLASRLSQLTAELMVK 179
Query: 181 AMD----------KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
AM L + PQ +YA ++K + ++N+ RSA +H + L
Sbjct: 180 AMPLIEAAGPGPEHERLARLNVRPQ-TEPSSYARMLAKEDFQINWNRSALAIHRQVMGLY 238
Query: 231 P-----FPGAWLEMMIGNKHER----------------IKLLESQLVEGEGKPGEVI--- 266
P + G L++M+ + L + + PG+V+
Sbjct: 239 PGATTHWKGKRLKVMVTEPLIKRLSDHLSSEAAALAEQWGLSAGETPDPSIHPGQVLAVV 298
Query: 267 -NPNFTIACSQGAVRIMRLQRAGGRV 291
+ +A + + Q G
Sbjct: 299 PDQGLVVASQGCPLLVKEAQLEGKSR 324
>gi|291276658|ref|YP_003516430.1| methionyl-tRNA formyltransferase [Helicobacter mustelae 12198]
gi|290963852|emb|CBG39688.1| methionyl-tRNA formyltransferase [Helicobacter mustelae 12198]
Length = 299
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 80/309 (25%), Positives = 140/309 (45%), Gaps = 13/309 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS--L 60
+RV+FMGT FA L+A V +V ++ QP +P+G R + + + +
Sbjct: 1 MRVLFMGTPLFAKVILEA-VCGEFEVVGLFCQPDKPSG-RKQEIQMPPTKTYVLQSHPSI 58
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P P +E Y++ + DV VVVAYG ++P R+L N HAS+LP++RGA+
Sbjct: 59 PIFQPESFDEEIYQKVAALKPDVIVVVAYGKILPSRLLAHRC---INLHASILPKYRGAS 115
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ I+ D G+ M M++ LD G + + I+ L ++L+ + A + E
Sbjct: 116 PIQEMILQDDAYFGVTAMAMEEGLDCGDILGISLCKNDHKISLGLLSEKLAQMGAGLIKE 175
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + L Q + K K E + A + RA +P +L+
Sbjct: 176 VLCREDLLPL---AQD-EIHSSYCKKIKKENGLVEFEDARKLERFSRAYEGWPQVFLQSG 231
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ + E Q +G+ E+ + C +G+V I LQ + + D++ G
Sbjct: 232 LKLFGIE--IREEQGSHKKGEILEITTEKIAVGCVRGSVWIKFLQAPNKQKVRAVDYVNG 289
Query: 301 CPVIIGCIV 309
+ +G ++
Sbjct: 290 RRLQVGMVL 298
>gi|254821962|ref|ZP_05226963.1| methionyl-tRNA formyltransferase [Mycobacterium intracellulare ATCC
13950]
Length = 290
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 95/295 (32%), Positives = 143/295 (48%), Gaps = 14/295 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+ L+ L+ S H +++V T+P AGRRG K S V ++A + +P
Sbjct: 1 MRLVFAGTPEPALPALRRLIDSPRHDVIAVLTRPDAAAGRRG-KPEPSPVAREALDRGIP 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + E+ LS D VVAYG ++ +L G+ N H SLLP WRGAA
Sbjct: 60 VLRPPRPNSAEFVAELSRLAPDCCAVVAYGALLRDDLLAVPPRGWINLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG + +++ LD+GP+ + I L + L++ A +
Sbjct: 120 PVQAAIAAGDTITGASTFQIEPTLDSGPIYGVVTETIRPTDTAGELLERLAISGAALLST 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + + L PQ G++ A KI+ + RV + A V IRA++P PGAW +
Sbjct: 180 TLDGIADSTLTPRPQPAEGVSVAPKITVEQARVRWDLPALVVERRIRAVTPNPGAWTVIG 239
Query: 241 IGNKHERIKLLESQLVEGEG-----KPGEVI--NPNFTIACSQGAVRIMRLQRAG 288
R+KL G PG + + VR+ ++Q G
Sbjct: 240 D----LRVKLGPVDAAVASGSPEPLPPGAIHVDRKGVWVGTGSDPVRLGQIQPPG 290
>gi|224532234|ref|ZP_03672866.1| methionyl-tRNA formyltransferase [Borrelia valaisiana VS116]
gi|224511699|gb|EEF82105.1| methionyl-tRNA formyltransferase [Borrelia valaisiana VS116]
Length = 316
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 83/313 (26%), Positives = 145/313 (46%), Gaps = 10/313 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ F+ +S A+ + +V + +V V T P +P G RG K + + +A +
Sbjct: 1 MRIFFVSSSSIALEVFKEIVK-HYEVVGVLTLPDKPKG-RGQKLSQNVIKMEAIARDIKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P L + N D+ +V +YG + + L+ G N H SLLP++RG +PI
Sbjct: 59 FDPLVLDDNILNLIRALNPDLMLVFSYGKIFKKEFLDIFPKGCINVHPSLLPKYRGVSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD+ +GI I M +D+G + + I S + + + +S L ++EA+
Sbjct: 119 QSAILNGDSVSGITIQSMALEMDSGNILVQKNFKIRSYDTSYDISKLVSNLSPSLVLEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
K+ + L PQ + T+ K ++F SA + N I A +P+P ++
Sbjct: 179 KKISKGFL-GIPQKSSEATFCSFFKKETGFIDFNLSAFEIKNRINACNPWPLVRAKLDYN 237
Query: 243 N-KHERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
R L+ L + K GE+++ + +G + ++ +QR G RVLD F
Sbjct: 238 EVIFHRADFLKIDLYKER-KVGEIVDFNPERGLFVNTREGILLLLEIQRPGRRVLDFKSF 296
Query: 298 LLG-CPVIIGCIV 309
G +IG +
Sbjct: 297 YNGSSRQLIGQVF 309
>gi|330466982|ref|YP_004404725.1| methionyl-tRNA formyltransferase [Verrucosispora maris AB-18-032]
gi|328809953|gb|AEB44125.1| methionyl-tRNA formyltransferase [Verrucosispora maris AB-18-032]
Length = 308
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 100/310 (32%), Positives = 147/310 (47%), Gaps = 6/310 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+F GT AV L A+ S H +++V T+P PAG RG V S V A E +
Sbjct: 1 MRVIFAGTPAVAVPALAAVAESRHELIAVVTRPDAPAG-RGRGLVRSPVGAWADEHGVEV 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + + E+ E+ D VVAYG ++P L +LG+ N H SLLP WRGAAP
Sbjct: 60 LTPARPREPEFLERLRDLAPDCVPVVAYGALVPPAALEIPRLGWVNLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A++ GD TG ++ ++++ LDTGPV I + L + L+ A +V
Sbjct: 120 VQHAVLHGDELTGASVFQLEEGLDTGPVYGTLTDEIRPADTSGDLLERLAQSGAGLLVAV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D L PQ +G+T A K++ + RV + A V IRA +P PG W
Sbjct: 180 LDALADGTARAEPQPADGVTLAPKLTVEDARVRWSDPAFAVDRRIRACTPAPGPWTTFRG 239
Query: 242 GNKHERIKLLESQLVEGEGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ + KPGE V + + VR+ ++ AG R + D+
Sbjct: 240 ERVKLGPVV--AAPDADALKPGELKVEKSRVLVGTATVPVRLGEVRAAGKRAMPATDWAR 297
Query: 300 GCPVIIGCIV 309
G V G +
Sbjct: 298 GVRVSAGEEL 307
>gi|42527152|ref|NP_972250.1| methionyl-tRNA formyltransferase [Treponema denticola ATCC 35405]
gi|73919425|sp|Q73M65|FMT_TREDE RecName: Full=Methionyl-tRNA formyltransferase
gi|41817576|gb|AAS12161.1| methionyl-tRNA formyltransferase [Treponema denticola ATCC 35405]
Length = 322
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 90/319 (28%), Positives = 144/319 (45%), Gaps = 25/319 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLS----AVHKKAQE- 57
+R++F GT AV L L++ + V T PP PAG R K S AV + +E
Sbjct: 1 MRILFAGTPSCAVPALN-LIAREFDLCGVLTNPPAPAG-RNKKMQDSDTALAVKELIKEG 58
Query: 58 ---FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
+ P L P KL ++ + +++ V AYG + + + LG N H SLLP
Sbjct: 59 VLPENFPILTPQKLDDNYRKELEALKSELLVCFAYGKIFGPKTMALFPLGGINIHPSLLP 118
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
RWRG AP+ AI+AGD TGI I + + D G + ++P++ + T L + + C
Sbjct: 119 RWRGPAPVPAAILAGDKLTGITIQTLAQKTDCGSILGQLEIPLNDSETTESLLADCADKC 178
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
+ + + E PQ E Y + K + +++ + AE + IRA +P+PG
Sbjct: 179 CPLLRDVLSDFENKLKQARPQEEAKALYCSMLKKEDGLIDWSKPAEEIERKIRAFTPWPG 238
Query: 235 AWLEMMIGNKHERIKLLESQLVE-------GEGKPGEVI----NPNFTIACSQGAVRIMR 283
+ E+I ++E+ L E K G ++ I G + +
Sbjct: 239 CFTF----KNSEKISIIEANLYEDASNEMTKNKKFGTILGTDKKCGILIQTGNGILAVSV 294
Query: 284 LQRAGGRVLDIGDFLLGCP 302
LQ+ + L+ DFL G P
Sbjct: 295 LQKQAKKKLEWKDFLNGSP 313
>gi|159029021|emb|CAO90007.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 237
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 82/233 (35%), Positives = 124/233 (53%), Gaps = 4/233 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT FAV TL+ L+++ +++V TQP + G RG + + S V + A E +P
Sbjct: 1 MRIVFFGTPTFAVPTLKKLLANPDIEVIAVVTQPDKRRG-RGNQLIPSPVKQIAIEQQIP 59
Query: 62 ALVPT--KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K + + AD VVVAYG ++ IL +LG N H S+LP++RGA
Sbjct: 60 VLQPKSVKKNAKTLDFLRQSRADAFVVVAYGQILSPEILEMPRLGCINVHGSILPKYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+Q I G+ ETGI M MD +DTGP+ PI+ N + L + A ++
Sbjct: 120 APVQWCIARGEKETGITTMLMDAGMDTGPMLLKAYSPIALFDNAEQVGATLGQMGADLLL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
E + KL++ + PQ N TYA I K + + + S + +H+ +R P
Sbjct: 180 ETLSKLDRAEITPIPQNNNDATYAPLIQKSDYLIPWQDSGQTIHDRVRGFYPN 232
>gi|307719713|ref|YP_003875245.1| methionyl-tRNA formyltransferase [Spirochaeta thermophila DSM 6192]
gi|306533438|gb|ADN02972.1| methionyl-tRNA formyltransferase [Spirochaeta thermophila DSM 6192]
Length = 299
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 83/292 (28%), Positives = 134/292 (45%), Gaps = 6/292 (2%)
Query: 23 SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNAD 82
+S +V V T P P G RG + V ++A L P +L EQ D
Sbjct: 2 ASRFPVVGVLTNPDAPRG-RGRRLQSPPVKEEALRLGLRVFQPERLDAAFREQVARLAPD 60
Query: 83 VAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDK 142
+ VVVAYG + + L G N H SLLP++RG API AI+ D ETGI + K+D
Sbjct: 61 ILVVVAYGKIFGPKFLALFPKGGINLHPSLLPKYRGPAPIPAAILNLDPETGITVQKLDL 120
Query: 143 HLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITY 202
+D G + ++ ++ + L + S A +VEA+ +E+ PQ E TY
Sbjct: 121 RMDAGDIILQERISLTGRETSESLSRWASERGAELLVEALSLIEEGKASPVPQDETAATY 180
Query: 203 AEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKP 262
+ K + + + +A + +RA P+P A+ + + + + E + P
Sbjct: 181 CTLLKKEDGLIAWEETAVRIDAKVRAFYPWPRAYTSLNRHRLYLLETV-PLEDREADASP 239
Query: 263 GEV--INP--NFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
G V ++ I +G + +++LQR G L +FL G P ++G +G
Sbjct: 240 GTVAGVDKDYGILIQTGKGLLGVLKLQREGRNPLGWKEFLNGMPDLVGLRLG 291
>gi|269218513|ref|ZP_06162367.1| methionyl-tRNA formyltransferase [Actinomyces sp. oral taxon 848
str. F0332]
gi|269211624|gb|EEZ77964.1| methionyl-tRNA formyltransferase [Actinomyces sp. oral taxon 848
str. F0332]
Length = 298
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 87/297 (29%), Positives = 137/297 (46%), Gaps = 8/297 (2%)
Query: 16 ATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT--KLGQEEY 73
+LQ L+ + H +++V T+ P PAGRR K SAVH++A + +P PT K ++
Sbjct: 2 PSLQRLLDAGHDVLAVLTRAPAPAGRR-HKLARSAVHEEADDRGIPVYTPTSLKKDEDVR 60
Query: 74 EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNET 133
+ VVAYGL+IP +L + G+ N H SLLP+WRGAAP+Q AI AG T
Sbjct: 61 RAIEELAPEAVAVVAYGLLIPPSLLEIPRFGWINLHFSLLPQWRGAAPVQYAIAAGQETT 120
Query: 134 GIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLS 193
G + K++ LDTGP+ + L + LS A +V +
Sbjct: 121 GASTFKLEAGLDTGPIFGSVVEKMGKRETAGELLERLSHSGAGLLV-ETFERLGRGAEPV 179
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLES 253
PQ A IS + RV++ A + RA +P PG W + ++ L +
Sbjct: 180 PQSGEPSY-APSISTADARVDWNLDALTIDRRSRAHTPAPGPWTTLE--GTRIKLGPLAA 236
Query: 254 QLVEGEGKPGEVINPNF-TIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ + +PG++ + + GAV + + AG + +D +L G +
Sbjct: 237 RPDVVDLQPGQIRSGKPPLVGTGAGAVELRAVAPAGKKPMDASAWLRGARLAPETRF 293
>gi|32265919|ref|NP_859951.1| methionyl-tRNA formyltransferase [Helicobacter hepaticus ATCC
51449]
gi|32261968|gb|AAP77017.1| methionyl-tRNA formyltransferase [Helicobacter hepaticus ATCC
51449]
Length = 316
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 81/313 (25%), Positives = 137/313 (43%), Gaps = 16/313 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++ GT FA A ++ S I+++ QP +P G R + + +
Sbjct: 13 MKLILAGTPAFASAIFTPIIKSKIFDILALICQPDKPFG-RKKEPKAPHTKENFASMGID 71
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P K+ + + DV +VVAYG ++P+ L N HAS+LP WRGA+P
Sbjct: 72 ILQPNKIDEIFIAHIQALQPDVILVVAYGKILPKAFLEIA--PCINIHASILPLWRGASP 129
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ+ I+ G++ +KM++ LD G + + VP + T Q V A+
Sbjct: 130 IQQMILTQPLYFGVSAIKMNEELDKGAILGLHYVPNTQQNITQLSAQLSCVGAKLALYVL 189
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
E L + T +K +A NV+ A +P +++
Sbjct: 190 THFKEIEPLNQINADASYCTKIKKSDGYVQ----LDAALNVYCAYLAYCEWPHIFIK--- 242
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
K +KL + L+E K GE+++ + + C QG+VRI LQ+ G L+
Sbjct: 243 SIKGYTLKLFDVALIESSDLHKMGEILSIETQSIVVGCKQGSVRIGTLQQEGKEKLNAAL 302
Query: 297 FLLGCPVIIGCIV 309
+L G + +G I+
Sbjct: 303 YLRGKRLNVGDIL 315
>gi|7657875|emb|CAB89181.1| Fmt protein [Brassica napus var. napus]
Length = 354
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 84/330 (25%), Positives = 148/330 (44%), Gaps = 29/330 (8%)
Query: 5 VVFMGTSEFAVATLQALVS------SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
++F+G+ + +V L+AL+ SS + + TQPP RG K + S V + A E
Sbjct: 26 LIFLGSPQVSVTVLEALLDASSAPNSSFEVAGIVTQPPARR-DRGRKVLPSPVAQYALEK 84
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVA----YGLVIPQRILNATKLGFYNGHASLLP 114
LP+ + + E FLS D+ + YG ++P + LN G N H SLLP
Sbjct: 85 GLPSDLIFSPEKAGDEAFLSSLRDLQPELCVTAAYGNILPTKFLNIPVHGTVNIHPSLLP 144
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
+RGAAP+QRA+ G ETG+++ + LD G V + + I L L
Sbjct: 145 LYRGAAPVQRALQDGVEETGVSLAFTVRKLDAGAVIASKSFQVDDQIKAPELLSLLFSEG 204
Query: 175 AHAMVEAMDKLEQN--NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ ++ + + PQ ++ T A KI+ E ++F + A +HN +RA + +
Sbjct: 205 SKLLIRELPSIFDGSAKSKAVPQDDSKATLAPKIAPDEAWLSFDQEAFILHNKVRAFAGW 264
Query: 233 PGAWLEMMIGNK-----------HERIKLLES-QLVEGEGKPGEVINPNFTIACSQG-AV 279
PG ++++ + ++ +S +++ GE + +C G A+
Sbjct: 265 PGTRAKVLVLDDKSGQQNELELKIITTRICQSTEVLNGEQDYVTFKKGSLVFSCGGGTAL 324
Query: 280 RIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
++ +Q G + +D F G G +
Sbjct: 325 EVLEVQLPGKKAIDATAFWNGLR---GQKL 351
>gi|305432639|ref|ZP_07401800.1| methionyl-tRNA formyltransferase [Campylobacter coli JV20]
gi|304444350|gb|EFM37002.1| methionyl-tRNA formyltransferase [Campylobacter coli JV20]
Length = 306
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 81/315 (25%), Positives = 140/315 (44%), Gaps = 16/315 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
M +++FMGT +A L+AL+ + +++++TQP + G R S +
Sbjct: 1 MMKKIIFMGTPSYATCILKALLEDENFELLALFTQPDKAVG-RKQILTPSDTKAFLLQKA 59
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+P P L E + + +VVA I N HASLLP++R
Sbjct: 60 PQIPIFTPNSLKDESVIEQICALKPDFIVVAAYGKILP-KAILDIAPCINLHASLLPKYR 118
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PIQ AI+ D ++G+ M M++ LDTG V + I + ++
Sbjct: 119 GASPIQSAILNADEKSGVCTMLMEEGLDTGAVLESVECDIRDKNVNEVFEILANLAAKLT 178
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ ++ + Q E+ T+ K K E + +A ++ A +P+PG +L
Sbjct: 179 LSTLLNYEKLLPK---KQDESLATH-CKKIKKEDGLVSLDNAREIYQKYLAFTPWPGVFL 234
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
E N + I+L ++ K GE++ +F +AC QG +RI +LQ +G + LD
Sbjct: 235 E----NGLKFIELELVDELKQNAKMGEILELEKESFLLACKQGILRIKKLQESGKKALDG 290
Query: 295 GDFLLGCPVIIGCIV 309
+L G + +
Sbjct: 291 RTYLNGKRLKSADSL 305
>gi|220924685|ref|YP_002499987.1| formyl transferase domain-containing protein [Methylobacterium
nodulans ORS 2060]
gi|219949292|gb|ACL59684.1| formyl transferase domain protein [Methylobacterium nodulans ORS
2060]
Length = 310
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 77/315 (24%), Positives = 125/315 (39%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ +G +F A L+A + ++ V+ P + G K A+ + A E LP
Sbjct: 1 MRIALIGQQDFGKAVLEAFLERGDTVAGVFCAPDK----EGAK--PDALKRAAGERGLPV 54
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E + + AD+ V+ PQ + + G H SLLPR+RG +
Sbjct: 55 FQFPSLKSPEAADTMRALEADLGVMAYVLQFAPQSFVGIPRHGTIQYHPSLLPRYRGPSS 114
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCAHAMVE 180
I I GD TG+ I + LD GPV + I + + + AM+E
Sbjct: 115 INWPIAKGDTRTGLTIFRPTDGLDEGPVILQKTCEIGPDDTLGDVYFGRLFPMGVAAMLE 174
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A D + Q E +Y S R+++ ++++N IRA +P PGAW +
Sbjct: 175 AADLVVVGRHQEVVQDETQASYEGWFSAKAARLHWDAHVDHLYNLIRAANPAPGAWTTIE 234
Query: 241 IGNKHER--IKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAGGRVLDIG 295
K + +G GEV I G + + +L+ GG +
Sbjct: 235 GRKLQLFDSRKHPARTISSVKGALGEVTEIGESAIRITAQGGQIEVFKLKPEGGAKMSAA 294
Query: 296 DFLLGCPVIIGCIVG 310
DF + +G I+G
Sbjct: 295 DFARQGGIRVGQILG 309
>gi|300815502|ref|ZP_07095727.1| methionyl-tRNA formyltransferase [Escherichia coli MS 107-1]
gi|300822909|ref|ZP_07103045.1| methionyl-tRNA formyltransferase [Escherichia coli MS 119-7]
gi|300903536|ref|ZP_07121458.1| methionyl-tRNA formyltransferase [Escherichia coli MS 84-1]
gi|300918262|ref|ZP_07134866.1| methionyl-tRNA formyltransferase [Escherichia coli MS 115-1]
gi|301305497|ref|ZP_07211589.1| methionyl-tRNA formyltransferase [Escherichia coli MS 124-1]
gi|300404409|gb|EFJ87947.1| methionyl-tRNA formyltransferase [Escherichia coli MS 84-1]
gi|300414523|gb|EFJ97833.1| methionyl-tRNA formyltransferase [Escherichia coli MS 115-1]
gi|300524675|gb|EFK45744.1| methionyl-tRNA formyltransferase [Escherichia coli MS 119-7]
gi|300532394|gb|EFK53456.1| methionyl-tRNA formyltransferase [Escherichia coli MS 107-1]
gi|300839192|gb|EFK66952.1| methionyl-tRNA formyltransferase [Escherichia coli MS 124-1]
gi|315255871|gb|EFU35839.1| methionyl-tRNA formyltransferase [Escherichia coli MS 85-1]
gi|324017856|gb|EGB87075.1| methionyl-tRNA formyltransferase [Escherichia coli MS 117-3]
Length = 268
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 92/270 (34%), Positives = 145/270 (53%), Gaps = 12/270 (4%)
Query: 48 LSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFY 106
S V A+E LP P L +E +Q ++ DV VVVAYGL++P+ +L +LG
Sbjct: 2 PSPVKVLAEEKGLPVFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCI 61
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H SLLPRWRGAAPIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L
Sbjct: 62 NVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTL 121
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L+ L ++ + +L Q E +TYAEK+SK E R+++ SA + I
Sbjct: 122 YDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCI 181
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRI 281
RA +P+P +WLE+ + +K+ ++ +++ PG ++ +A G + +
Sbjct: 182 RAFNPWPMSWLEIEG----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNL 237
Query: 282 MRLQRAGGRVLDIGDFLLGCP--VIIGCIV 309
+ LQ AG + + D L + G +
Sbjct: 238 LSLQPAGKKAMSAQDLLNSRREWFVPGNRL 267
>gi|301018855|ref|ZP_07183094.1| methionyl-tRNA formyltransferase [Escherichia coli MS 69-1]
gi|300399512|gb|EFJ83050.1| methionyl-tRNA formyltransferase [Escherichia coli MS 69-1]
Length = 268
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 92/270 (34%), Positives = 145/270 (53%), Gaps = 12/270 (4%)
Query: 48 LSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFY 106
S V A+E LP P L +E +Q ++ DV VVVAYGL++P+ +L +LG
Sbjct: 2 PSPVKVLAEEKGLPVFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCI 61
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H SLLPRWRGAAPIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L
Sbjct: 62 NVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTL 121
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L+ L ++ + +L Q E +TYAEK+SK E R+++ SA + I
Sbjct: 122 YDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCI 181
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRI 281
RA +P+P +WLE+ + +K+ ++ +++ PG ++ +A G + +
Sbjct: 182 RAFNPWPMSWLEIEG----QPVKVWKASVIDTTTNAAPGTILEANKQGIQVATGDGILNL 237
Query: 282 MRLQRAGGRVLDIGDFLLGCP--VIIGCIV 309
+ LQ AG + + D L + G +
Sbjct: 238 LSLQPAGKKAMSAQDLLNSRREWFVPGNRL 267
>gi|300932180|ref|ZP_07147460.1| methionyl-tRNA formyltransferase [Escherichia coli MS 187-1]
gi|300946509|ref|ZP_07160775.1| methionyl-tRNA formyltransferase [Escherichia coli MS 116-1]
gi|300955325|ref|ZP_07167707.1| methionyl-tRNA formyltransferase [Escherichia coli MS 175-1]
gi|301643893|ref|ZP_07243923.1| methionyl-tRNA formyltransferase [Escherichia coli MS 146-1]
gi|300317769|gb|EFJ67553.1| methionyl-tRNA formyltransferase [Escherichia coli MS 175-1]
gi|300453815|gb|EFK17435.1| methionyl-tRNA formyltransferase [Escherichia coli MS 116-1]
gi|300460064|gb|EFK23557.1| methionyl-tRNA formyltransferase [Escherichia coli MS 187-1]
gi|301077736|gb|EFK92542.1| methionyl-tRNA formyltransferase [Escherichia coli MS 146-1]
Length = 268
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 92/270 (34%), Positives = 145/270 (53%), Gaps = 12/270 (4%)
Query: 48 LSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFY 106
S V A+E LP P L +E +Q ++ DV VVVAYGL++P+ +L +LG
Sbjct: 2 PSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCI 61
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H SLLPRWRGAAPIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L
Sbjct: 62 NVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTL 121
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L+ L ++ + +L Q E +TYAEK+SK E R+++ SA + I
Sbjct: 122 YDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCI 181
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRI 281
RA +P+P +WLE+ + +K+ ++ +++ PG ++ +A G + +
Sbjct: 182 RAFNPWPMSWLEIEG----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNL 237
Query: 282 MRLQRAGGRVLDIGDFLLGCP--VIIGCIV 309
+ LQ AG + + D L + G +
Sbjct: 238 LSLQPAGKKAMSAQDLLNSRREWFVPGNRL 267
>gi|289805201|ref|ZP_06535830.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 139
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 63/127 (49%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL++S H+IV V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLTSGHNIVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L +E + ++ DV VVVAYGL++P+ +L+ +LG N H SLLPRWRGAA
Sbjct: 63 VFQPVSLRPQENQHLVADLHADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWRGAA 122
Query: 121 PIQRAIM 127
PIQR++
Sbjct: 123 PIQRSLW 129
>gi|281413930|ref|ZP_06245672.1| methionyl-tRNA formyltransferase [Micrococcus luteus NCTC 2665]
Length = 366
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 91/309 (29%), Positives = 142/309 (45%), Gaps = 18/309 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LRV++ GT E AV L+AL+ S+H +V V T+P P GRR S V A+E LP
Sbjct: 6 PLRVLYAGTPETAVPALRALLDSAHEVVGVLTRPDAPVGRR-RVLTPSPVAVTAEEAGLP 64
Query: 62 ALVPTKLGQEEY----EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
L +L E + + ADVAVVVAYG ++P L + G+ N H S LP +R
Sbjct: 65 VLKADRLRGPEGADALQAIRALEADVAVVVAYGALVPAEALQIPRHGWLNLHFSALPAYR 124
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAP+QRA+MAG+ E + ++++ LDTGPV P++++ + +L+
Sbjct: 125 GAAPVQRAVMAGETEIAADVFQLEEGLDTGPVFARLTRPVAADETAGAVLTDLAERGGPL 184
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKI-SKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+++ +D+L +PQ + + G + + P W
Sbjct: 185 VIDVLDRLADGTATATPQRGEPTHAPKLTAADGLVDPARPAAEVAARINGVTPEPGAWGW 244
Query: 237 LEMMIGNKHERIKLLESQLVEG----------EGKPGEVI--NPNFTIACSQGAVRIMRL 284
L G R KL V PG+++ + + GAVR+ R+
Sbjct: 245 LTADDGAAPARFKLDGVAPVRAGDDGWPSDLDAAAPGQILVAAKAAWLRTAGGAVRLSRV 304
Query: 285 QRAGGRVLD 293
Q AG +++
Sbjct: 305 QPAGRKLMP 313
>gi|12045226|ref|NP_073037.1| methionyl-tRNA formyltransferase [Mycoplasma genitalium G37]
gi|1346022|sp|P47605|FMT_MYCGE RecName: Full=Methionyl-tRNA formyltransferase
gi|3844952|gb|AAC71592.1| methionyl-tRNA formyltransferase [Mycoplasma genitalium G37]
gi|166078720|gb|ABY79338.1| methionyl-tRNA formyltransferase [synthetic Mycoplasma genitalium
JCVI-1.0]
Length = 311
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 69/309 (22%), Positives = 134/309 (43%), Gaps = 10/309 (3%)
Query: 4 RVVFMGTSEFAVATLQAL-VSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VF GTS + L+ L + I +V TQP + R K V S V E ++
Sbjct: 3 KIVFFGTSTLSKKCLEQLFYDNDFEICAVVTQPDK-INHRNNKIVPSDVKSFCLEKNITF 61
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P + + + AD+ + V++G + Q I++ N H S LP RG AP+
Sbjct: 62 FQPKQSISIKADL-EKLKADIGICVSFGQYLHQDIIDLFPNKVINLHPSKLPLLRGGAPL 120
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
I+ G ++ ++++++ K +D GP+ + ++++ NT L + ++E
Sbjct: 121 HWTIINGFKKSALSVIQLVKKMDAGPIWKQQDFLVNNDWNTGDLSIYVEEHSPSFLIECT 180
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
++ QI + E ++ + ++ N ++ L+P PG WL
Sbjct: 181 KEILNKKGKWFEQIGEPTFGLNIRKEQEH-LDLNQIYKSFLNWVKGLAPKPGGWLSFEGK 239
Query: 243 NKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQG-AVRIMRLQRAGGRVLDIGDFL 298
N + K + + GE++N IA + I ++Q G RV+++ + +
Sbjct: 240 NI-KIFKAKYVSKSNYKHQLGEIVNISRKGINIALKSNEIISIEKIQIPGKRVMEVSEII 298
Query: 299 LG-CPVIIG 306
G P ++G
Sbjct: 299 NGKHPFVVG 307
>gi|15639743|ref|NP_219193.1| methionyl-tRNA formyltransferase (fmt) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025981|ref|YP_001933753.1| methionyl-tRNA formyltransferase [Treponema pallidum subsp.
pallidum SS14]
gi|6016039|sp|O83737|FMT_TREPA RecName: Full=Methionyl-tRNA formyltransferase
gi|229487571|sp|B2S3Z5|FMT_TREPS RecName: Full=Methionyl-tRNA formyltransferase
gi|3323062|gb|AAC65723.1| methionyl-tRNA formyltransferase (fmt) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018556|gb|ACD71174.1| methionyl-tRNA formyltransferase [Treponema pallidum subsp.
pallidum SS14]
gi|291060118|gb|ADD72853.1| methionyl-tRNA formyltransferase [Treponema pallidum subsp.
pallidum str. Chicago]
Length = 319
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 97/322 (30%), Positives = 155/322 (48%), Gaps = 21/322 (6%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS---- 59
RV F GT E AV +L+ + + H +V V T PP GR G K V SAV ++
Sbjct: 3 RVFFAGTPECAVPSLRRVACA-HRVVGVLTNPPAAVGRSG-KLVHSAVAREFFRLKASGV 60
Query: 60 LP----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
LP VP +L + Y+ + DV V AYG + R L G N H SLLPR
Sbjct: 61 LPESASLFVPGRLDRAFYDAVEALRPDVLVCFAYGKIFGPRFLALFPRGAINVHPSLLPR 120
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
WRG+ P+ AI+AGD ETG+ + + + +D G + +V + T L LS++ A
Sbjct: 121 WRGSTPVPAAILAGDCETGVTLQYIGEEMDAGDILAQSRVQLDGTETTGALLSRLSLVAA 180
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
+ + + +E++ L + Q + T+ K+ + ++ A + IRA +P+PG
Sbjct: 181 DLVDDVLVGVERHTLAPAAQDHSQATFCGKLCREMGLADWSNPAVVLERKIRAFTPWPGL 240
Query: 236 WLEMMIGNKHERIKLLESQLVEGEGKP----GEVI---NPNFTIACSQGAVRIMRLQRAG 288
+ ERI +L+++ E P G V+ + G + +++LQR+G
Sbjct: 241 FT----YKDGERIAILQARSCESSFVPLAPVGTVLAADKNGVFVQTGDGVLSLLQLQRSG 296
Query: 289 GRVLDIGDFLLGCPVIIGCIVG 310
+ L DFL G P+++ +G
Sbjct: 297 KKPLFWRDFLNGSPLLLTGRLG 318
>gi|325831457|ref|ZP_08164711.1| methionyl-tRNA formyltransferase [Eggerthella sp. HGA1]
gi|325486711|gb|EGC89159.1| methionyl-tRNA formyltransferase [Eggerthella sp. HGA1]
Length = 318
Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 105/316 (33%), Positives = 157/316 (49%), Gaps = 19/316 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT EFA A L L H + +VYT+P G RG + S V A+ L
Sbjct: 1 MRVVFMGTPEFAAAILDDLAE-QHDVAAVYTRPDAVRG-RGKRLEPSPVKAAAERRGLRV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + + SF DV V AYG ++P+ +L+ + G N HASLLPRWRGAAP
Sbjct: 59 LTPRTLRDEAAQRELASFAPDVICVAAYGAILPKAVLDIPRFGCLNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I+RAI+AGD E G+ IM+M++ LDTG + + + + A L +EL+ L +HA++ A
Sbjct: 119 IERAILAGDEEAGVCIMRMEEGLDTGAYC-VCRTAVVDGKSAAELTEELADLGSHALLTA 177
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E+ + Q E +TYA KI K E ++ A ++A S + +
Sbjct: 178 LVHVERGAAEWTEQDEEQVTYASKIEKRELDLSPADGAARAARKVQASSAAHPSRAVVAG 237
Query: 242 GNKHERIKLLESQLVEGEG--------KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRV 291
N +LE++ E +PGEV + + GA+ + L+ G +
Sbjct: 238 RN----ATVLEAREPEDAAGRELAAGIRPGEVRFAGKRLFLGMADGALEVGALKPDGKQT 293
Query: 292 LDIGDFLLGCP-VIIG 306
+D F G + G
Sbjct: 294 MDARSFAAGVQGIKDG 309
>gi|167957316|ref|ZP_02544390.1| methionyl-tRNA formyltransferase [candidate division TM7
single-cell isolate TM7c]
Length = 300
Score = 119 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 74/306 (24%), Positives = 139/306 (45%), Gaps = 17/306 (5%)
Query: 1 MTLR---VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M + ++F GT +F++ TL+ALV + +I +V T+P G RG K AV A E
Sbjct: 1 MKKKSKTIIFFGTEDFSLITLKALVEAGFNIGAVVTKPDARRG-RGTKKSQPAVKIYANE 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
++ + ++ + V ++V+YG +IPQ I++ G N H SLLP++R
Sbjct: 60 HNIQV-WQPQNLKDIVDDIKKIGKPVGILVSYGKIIPQSIIDLFTPGIINIHPSLLPKYR 118
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
G PI+ AI GD ETGI+I++++ +D GP+ K ++S L L + A+
Sbjct: 119 GPTPIESAIKNGDKETGISIIQLNARMDAGPIYRQVKHALNSKETKLDLYNTLGKIGANE 178
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+++ + + ++ Q E+ +Y +SK ++ + + + +
Sbjct: 179 IIKTLPGILNESILPKDQDESKASYCSLLSKDDSLIQPHQMTAQQIER---VIRAHLDYP 235
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVR-IMRLQRAGGRVLDIGD 296
+ + + + S + + + TIAC + I + G+ + I D
Sbjct: 236 KTKLPFLQNNLIVTRSHIAKEPSES--------TIACKDDTLLSIDEIIAPSGKHMKIKD 287
Query: 297 FLLGCP 302
+L G
Sbjct: 288 YLNGIR 293
>gi|282876352|ref|ZP_06285219.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis SK135]
gi|281295377|gb|EFA87904.1| methionyl-tRNA formyltransferase [Staphylococcus epidermidis SK135]
Length = 271
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 98/273 (35%), Positives = 151/273 (55%), Gaps = 12/273 (4%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT+ +++FMGT +F+ L+ L+ + H +++V TQP RP G R V + A +
Sbjct: 1 MTMSKIIFMGTPDFSTKILEMLI-AEHEVIAVVTQPDRPVG-RKKVMTPPPVKRVATKHQ 58
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P K +E E LS +D+ V A+G ++P+ +LNA KLG N HASLLP++RG
Sbjct: 59 IPVYQPEKLKDSQELESLLSLESDLIVTAAFGQLLPESLLNAPKLGAINVHASLLPKYRG 118
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API +AI+ G+ ETGI IM M K LD G + + + I N + +LS L A +
Sbjct: 119 GAPIHQAIIDGEEETGITIMYMVKKLDAGNIISQQSIRIEEEDNVGTMHDKLSFLGAELL 178
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + + N PQ + T+A I + + RV++ SA+ +HNHIR LSP+P A+
Sbjct: 179 KKTLPSIIDNTNDSIPQDDALATFASNIRREDERVDWNMSAQAIHNHIRGLSPWPVAYTT 238
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPNFT 271
M N +KL + +V+G+ +VI
Sbjct: 239 MNEKN----LKLFSAFIVKGK----KVIQEQLL 263
>gi|300921904|ref|ZP_07138059.1| methionyl-tRNA formyltransferase [Escherichia coli MS 182-1]
gi|301325147|ref|ZP_07218679.1| methionyl-tRNA formyltransferase [Escherichia coli MS 78-1]
gi|309794563|ref|ZP_07688985.1| methionyl-tRNA formyltransferase [Escherichia coli MS 145-7]
gi|300421705|gb|EFK05016.1| methionyl-tRNA formyltransferase [Escherichia coli MS 182-1]
gi|300847979|gb|EFK75739.1| methionyl-tRNA formyltransferase [Escherichia coli MS 78-1]
gi|308121613|gb|EFO58875.1| methionyl-tRNA formyltransferase [Escherichia coli MS 145-7]
Length = 268
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 91/270 (33%), Positives = 145/270 (53%), Gaps = 12/270 (4%)
Query: 48 LSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFY 106
S + A+E LP P L +E +Q ++ DV VVVAYGL++P+ +L +LG
Sbjct: 2 PSPIKVLAEEKGLPVFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCI 61
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H SLLPRWRGAAPIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L
Sbjct: 62 NVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTL 121
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L+ L ++ + +L Q E +TYAEK+SK E R+++ SA + I
Sbjct: 122 YDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCI 181
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRI 281
RA +P+P +WLE+ + +K+ ++ +++ PG ++ +A G + +
Sbjct: 182 RAFNPWPMSWLEIEG----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNL 237
Query: 282 MRLQRAGGRVLDIGDFLLGCP--VIIGCIV 309
+ LQ AG + + D L + G +
Sbjct: 238 LSLQPAGKKAMSAQDLLNSRREWFVPGNRL 267
>gi|238063928|ref|ZP_04608637.1| methionyl-tRNA formyltransferase [Micromonospora sp. ATCC 39149]
gi|237885739|gb|EEP74567.1| methionyl-tRNA formyltransferase [Micromonospora sp. ATCC 39149]
Length = 308
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 97/310 (31%), Positives = 149/310 (48%), Gaps = 10/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT AV L A+ +S H +V+V T+P PAG RG V S V A E +
Sbjct: 1 MRLIFAGTPAVAVPALAAVAASGHELVAVVTRPDAPAG-RGRGLVRSPVGAWADEHGVEV 59
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + + E+ ++ D VVAYG ++P L + G+ N H SLLP WRGAAP
Sbjct: 60 LTPARPREPEFLDRLRELAPDCVPVVAYGALVPPTALEIPRHGWINLHFSLLPAWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q+A++ GD TG ++ +++ LDTGPV I + L + L+ A +V
Sbjct: 120 VQQAVLHGDELTGASVFALEEGLDTGPVYGTVTDEIRPTDTSGDLLERLAHSGAGLLVAV 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + PQ +G++ A K++ + RV + A V IRA +P PG W
Sbjct: 180 LDAIAAGTARAQPQPADGVSLAPKLTVDDARVRWGDPAFAVDRRIRACTPAPGPWTTF-- 237
Query: 242 GNKHERIKLLESQLVEG--EGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ ER+KL KPGE++ + V + ++ AG + + D+
Sbjct: 238 --RGERVKLGPVVPAPDGPALKPGELLAEKSRVLAGTATVPVALGEVRAAGKKAMPASDW 295
Query: 298 LLGCPVIIGC 307
G V G
Sbjct: 296 ARGARVTAGE 305
>gi|113955332|ref|YP_730509.1| methionyl-tRNA formyltransferase [Synechococcus sp. CC9311]
gi|123132585|sp|Q0IAL3|FMT_SYNS3 RecName: Full=Methionyl-tRNA formyltransferase
gi|113882683|gb|ABI47641.1| methionyl-tRNA formyltransferase [Synechococcus sp. CC9311]
Length = 342
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 102/340 (30%), Positives = 149/340 (43%), Gaps = 33/340 (9%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ ++F GT ++AV TL AL + H+IV V TQP R G RG V SAV KA + L
Sbjct: 1 MNILFWGTPDYAVPTLMALHQAGHTIVGVVTQPDRRRG-RGKTLVPSAVKAKAIKMGLRV 59
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ Q+E Q D++VVVA+G ++P+ +LN LG +NGH SLLPRWRGA
Sbjct: 60 FTPERIKQDETCQQQLAELQPDLSVVVAFGQILPKNVLNQPPLGCWNGHGSLLPRWRGAG 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ +I+ GD ETG+ +M M++ LDTGPV R +PI N L + +SVL A MVE
Sbjct: 120 PIQWSILEGDPETGVGVMAMEEGLDTGPVLIERNLPIGLLDNGHTLAERMSVLTAELMVE 179
Query: 181 AMDKLEQNNLPLSPQ------IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AM +E P+ + N + S + + +
Sbjct: 180 AMPLIESAGQGSEPERRARLKVMNQSDRSGDASYARMLTKQDHQIDWSASALNIHRKVMA 239
Query: 235 AWLEMMIGNKHERIKLLESQLV--------------------EGEGKPGEVINP----NF 270
+ + +R+KLL + + G PG V+
Sbjct: 240 LYPNAVTLWNDKRLKLLHCEPLIDRLREELPAEVHPLIGRWPTGGHPPGTVLESVKGLGV 299
Query: 271 TIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
++ S + + Q G D + G
Sbjct: 300 VVSTSGCPILVRAAQLEGKGRSDGDSLIQQLNAAAEQQFG 339
>gi|169837911|ref|ZP_02871099.1| Methionyl-tRNA formyltransferase [candidate division TM7
single-cell isolate TM7a]
Length = 309
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 87/309 (28%), Positives = 162/309 (52%), Gaps = 18/309 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ +FMGT EFA+ +L+ + ++ + ++T+ + RG K + S V + + ++
Sbjct: 1 MKTIFMGTPEFAIPSLEVIFKNT-DLQLIFTKEDKR-NARGNKIIFSPVKQFGIDNNVEI 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P K+ EE + N D+ VVVAYG ++P+ I++ K G N H+SLLP++RGA+P
Sbjct: 59 IQPRKMKDEEVINKIKEINPDLIVVVAYGKILPKEIIDIPKYGIINVHSSLLPKYRGASP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ GD ETG++IM +++ LD+G V I+ + L +L L A + +A
Sbjct: 119 IHSAILNGDAETGVSIMYIEEGLDSGDVILREYCEITEDDTLGTLHDKLKELGADGLTKA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E + Q ++ T + I+K + R+++ + E ++N IR L+PFP A+
Sbjct: 179 LKLIENGEVQAEKQDDSKATLVKPITKEQARIDWNNTKEVIYNQIRGLNPFPAAYTF--- 235
Query: 242 GNKHERIKLLESQLVE--------GEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGG 289
K E IK+ +S+ ++ E + G V+ + + G + I+ + G
Sbjct: 236 NEKGENIKIYKSEKIDKKYEDENGNEMENGTVVEIINKKGPVVKVANGGLLILEAKFEGK 295
Query: 290 RVLDIGDFL 298
++ D +
Sbjct: 296 KLQRGADII 304
>gi|218510169|ref|ZP_03508047.1| methionyl-tRNA formyltransferase [Rhizobium etli Brasil 5]
Length = 242
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 138/232 (59%), Positives = 167/232 (71%), Gaps = 1/232 (0%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT EF+V TL+ LV + H IV+VYTQPPRP GRRGL S VH+ A+ LP P
Sbjct: 1 MGTPEFSVPTLRLLVDAGHRIVAVYTQPPRPGGRRGLDLQKSPVHQAAELLGLPVFTPIN 60
Query: 68 LGQ-EEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
EE E+F +F ADVAVVVAYGL++P+ +LN T+ G YNGHASLLPRWRGAAPIQRAI
Sbjct: 61 FRDAEERERFAAFKADVAVVVAYGLLLPEAVLNGTRDGCYNGHASLLPRWRGAAPIQRAI 120
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
MAGD +TG+ +MKMDK LDTG VA R+V I N+ L L + A AM EAM KLE
Sbjct: 121 MAGDEKTGMMVMKMDKGLDTGAVALSREVEIGPNMTAGELHDRLMQVGAKAMAEAMVKLE 180
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
N+LPL+PQ ++G+ YA KI K ETR++F R A +VHNHIR L+PFPGAW+
Sbjct: 181 MNDLPLTPQRQDGVLYAAKIDKAETRIDFARPARDVHNHIRGLAPFPGAWVR 232
>gi|183602601|ref|ZP_02963966.1| methionyl-tRNA formyltransferase [Bifidobacterium animalis subsp.
lactis HN019]
gi|241190675|ref|YP_002968069.1| methionyl-tRNA formyltransferase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241196081|ref|YP_002969636.1| methionyl-tRNA formyltransferase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|183218242|gb|EDT88888.1| methionyl-tRNA formyltransferase [Bifidobacterium animalis subsp.
lactis HN019]
gi|240249067|gb|ACS46007.1| methionyl-tRNA formyltransferase [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240250635|gb|ACS47574.1| methionyl-tRNA formyltransferase [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|295793664|gb|ADG33199.1| methionyl-tRNA formyltransferase [Bifidobacterium animalis subsp.
lactis V9]
Length = 303
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 85/296 (28%), Positives = 134/296 (45%), Gaps = 12/296 (4%)
Query: 25 SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVA 84
+V+V T+P P G RG K + S V A+E L + + + A A
Sbjct: 8 HFEVVAVLTRPDAPTG-RGRKIMPSPVKMAARELGLDVIECDPADECFLSALKATGAQCA 66
Query: 85 VVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHL 144
VVAYG ++ + +L A LG+YN H SLLP+WRGAAP+QRAI AGD TG ++ ++ +
Sbjct: 67 AVVAYGKILRESVLEALPLGWYNLHFSLLPQWRGAAPVQRAIWAGDEVTGCSVFRITAGM 126
Query: 145 DTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAE 204
D GPV V I ++ N L L+ A + ++ L++ + Q A
Sbjct: 127 DRGPVLGQSTVTIGAHENAGELLDRLAEDGAGLLAASLQALDEGVVNAVDQPAGSYDVAA 186
Query: 205 KISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEG------ 258
KI+ + + F A + IRA +P PGAW + L S+ +
Sbjct: 187 KITTQDAHMRFDVPAFALDRQIRACTPAPGAWANLHPHGDDANETLHVSKAIPADMTADE 246
Query: 259 ---EGKPGE--VINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
KPGE V + + S + ++ ++ AG R + ++ G + G +
Sbjct: 247 SPRNLKPGELHVTKHHVWVGTSTDPLELLVVKAAGKREMGAPEWARGAHLAEGAYL 302
>gi|296125442|ref|YP_003632694.1| formyl transferase domain protein [Brachyspira murdochii DSM 12563]
gi|296017258|gb|ADG70495.1| formyl transferase domain protein [Brachyspira murdochii DSM 12563]
Length = 312
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 78/310 (25%), Positives = 134/310 (43%), Gaps = 5/310 (1%)
Query: 4 RVVFMGTSEFAVAT-LQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
V+ G+++F LQ + + + ++ V R+G + S V + A E +L
Sbjct: 3 NVIVAGSTDFTRDCILQLMKTDNVNLSGVIAPIDTKKDRKG-NIINSPVAEAALENNLNL 61
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + ++E+ D +VVAYG ++ +R L K+ N H SLLP RGA+P
Sbjct: 62 FQPESINKDEFYGILTDIAPDFLIVVAYGKILTKRTLALPKIMPLNIHGSLLPILRGASP 121
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
++ A++ G ++G + KMD LD G + +V I+ N L + + + E
Sbjct: 122 VEHALLYGFKKSGTTLQKMDAKLDEGDIILQHEVDIADNWQFNDLYDRIKESGVYLLKEF 181
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ + Q ++ TY KI K + +++F R ++HN RA +P A+
Sbjct: 182 FKDADRYLSNMIKQDDSSATYCSKIKKEDGKLDFSRDVISLHNMTRAFVRWPTAYCFYKD 241
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ + GK +V N I G I LQR G + + +FL
Sbjct: 242 ISIRVFKSEYKYNTNCQSDFGKIADVNNEGIYIQALNGIYIIKELQREGKKRQTVKEFLC 301
Query: 300 GCPVIIGCIV 309
G + IG
Sbjct: 302 GNKLNIGEYF 311
>gi|301633729|gb|ADK87283.1| methionyl-tRNA formyltransferase [Mycoplasma pneumoniae FH]
Length = 311
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 74/312 (23%), Positives = 133/312 (42%), Gaps = 8/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++VVF GTS + L+A+ + V TQP + R K SAV + E ++P
Sbjct: 2 IKVVFFGTSTLSKCCLEAIFQDPEFVVCGVVTQPDK-VNERNNKINFSAVKQFCIENNIP 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K + + AD+ V VA+G I I+N N H S LP RG AP
Sbjct: 61 CFQPEKNI-QIKTELAQLQADIGVCVAFGQYIHNDIINLFPYKIANLHPSKLPLLRGGAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ I+ G + ++++++ + +D+GP+ + ++ N NT L + + +++
Sbjct: 120 LHWTIINGFTTSSLSVIELVQKMDSGPIWKQKDFKVNPNWNTGDLFEYVQTHAPQFLIQC 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ Q N T+ I K + R++ + N ++ L+P PG WLE
Sbjct: 180 LKEIVSGKSQWKEQ-INPPTFGLNIKKEQERLDLNLEPKAFINWVKGLAPKPGGWLEFEG 238
Query: 242 GNKH--ERIKLLESQLVEGEGKPGEVINPNFTIA-CSQGAVRIMRLQRAGGRVLDIGDFL 298
N + L + G+ ++ IA + V + +Q G R + + + +
Sbjct: 239 QNIKILQATYLGKMTSTTAVGQITKISKQGIEIALANDEIVLLQIIQIPGKRAMGVSEII 298
Query: 299 LG-CPVIIGCIV 309
G P G
Sbjct: 299 NGKHPFAEGKFF 310
>gi|219125445|ref|XP_002182992.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405786|gb|EEC45728.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 336
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 89/332 (26%), Positives = 148/332 (44%), Gaps = 32/332 (9%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
RVVF+GT E A +LQ + +S IV V TQP + R+G S V K A
Sbjct: 1 KKRVVFLGTPEVAATSLQTIYRASQHPDSAFEIVGVVTQPAKRRKRKGQ-LEASPVGKLA 59
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFN--ADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+E +P L P K ++ L D+ + AYG +P+R L A G N H SLL
Sbjct: 60 EELDIPVLAPEKAKDVDFLDHLEHQVRPDLCITAAYGQYLPKRFLAAPPYGTVNIHPSLL 119
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
PRWRGA+P+QR++ AGDN G+ ++ +D GP+ + I + + +L +
Sbjct: 120 PRWRGASPVQRSLEAGDNPVGVTVLFTVSQMDAGPIIAQTERMIDEDETATTVLPKLFEI 179
Query: 174 CAHAMVEAMDKLE---QNNLPLSPQIENGITYAEKISKGETRV-NFCRSAENVHNHIRAL 229
+ ++E + + + + Q A I E + + SA HN R
Sbjct: 180 GTNLLLEHLPAVLSGKISMDTATTQDGTKAVSAAMIHSSEGELKPWLESARTCHNRGRGF 239
Query: 230 SPFPGAWLEMMIGN-----------KHERIKLLESQLVEGEG-KPGEVI------NPNFT 271
S +PG ++ IG + ++K++E+++V +P ++
Sbjct: 240 SMWPGTFMYFQIGGGENDSSADGAREPMKVKIVETRVVPDLVREPTNIVSLGPTKKSGLY 299
Query: 272 IACSQGA-VRIMRLQRAGGRVLDIGDFLLGCP 302
+ C G+ + ++++Q A + DF G P
Sbjct: 300 VTCVDGSVLELLQVQPATRKAFRARDFQNGYP 331
>gi|13508282|ref|NP_110232.1| methionyl-tRNA formyltransferase [Mycoplasma pneumoniae M129]
gi|2498387|sp|P75235|FMT_MYCPN RecName: Full=Methionyl-tRNA formyltransferase
gi|1673970|gb|AAB95947.1| methionyl-tRNA formyltransferase [Mycoplasma pneumoniae M129]
Length = 311
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 74/312 (23%), Positives = 132/312 (42%), Gaps = 8/312 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++VVF GTS + L+A+ + V TQP + R K SAV + E ++P
Sbjct: 2 IKVVFFGTSTLSKCCLEAIFQDPEFVVCGVVTQPDK-VNERNNKINFSAVKQFCIENNIP 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K + + AD+ V VA+G I I+N N H S LP RG AP
Sbjct: 61 CFQPEKNI-QIKTELAQLQADIGVCVAFGQYIHNDIINLFPYKIANLHPSKLPLLRGGAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ I+ G + ++++++ + +D GP+ + ++ N NT L + + +++
Sbjct: 120 LHWTIINGFTTSSLSVIELVQKMDAGPIWKQKDFKVNPNWNTGDLFEYVQTHAPQFLIQC 179
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ ++ Q N T+ I K + R++ + N ++ L+P PG WLE
Sbjct: 180 LKEIVSGKSQWKEQ-INPPTFGLNIKKEQERLDLNLEPKAFINWVKGLAPKPGGWLEFEG 238
Query: 242 GNKH--ERIKLLESQLVEGEGKPGEVINPNFTIA-CSQGAVRIMRLQRAGGRVLDIGDFL 298
N + L + G+ ++ IA + V + +Q G R + + + +
Sbjct: 239 QNIKILQATYLGKMTSTTAVGQITKISKQGIEIALANDEIVLLQIIQIPGKRAMGVSEII 298
Query: 299 LG-CPVIIGCIV 309
G P G
Sbjct: 299 NGKHPFAEGKFF 310
>gi|153950956|ref|YP_001397352.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
doylei 269.97]
gi|166214886|sp|A7H1H2|FMT_CAMJD RecName: Full=Methionyl-tRNA formyltransferase
gi|152938402|gb|ABS43143.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
doylei 269.97]
Length = 305
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 83/318 (26%), Positives = 144/318 (45%), Gaps = 23/318 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
M +++FMGT +A L+ALV + + +V+++TQP + G R S +
Sbjct: 1 MK-KIIFMGTPSYATCILKALVENENFKLVALFTQPDKAVG-RKQILTPSDTKAFLSQNY 58
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
S+P P+ L E + + +VVA I N HASLLP++R
Sbjct: 59 PSIPIFTPSSLKDENIMRQIKDLNPDFIVVAAYGKILP-KAILDLAPCVNLHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PIQ AI+ D ++G+ M M++ LDTG + + I ++ + ++
Sbjct: 118 GASPIQSAILNKDEKSGVCTMLMEEGLDTGAILESLECDIKDKNSSEVFELLANLAAKLI 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ L + + E + + K E + ++A ++ A +P+PG +L
Sbjct: 178 L----STLLNFDKITPKKQEESLATLCRKIKKEDGLINLQNARELYQKYLAFTPWPGVFL 233
Query: 238 EMMIGNKHERIKLLESQLVEG---EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRV 291
E + K LE +LV+ K GE++ +F +AC QG +RI +LQ +G +
Sbjct: 234 ENGL-------KFLELELVDELKQNAKMGEILELEKESFLLACKQGVLRIKKLQESGKKA 286
Query: 292 LDIGDFLLGCPVIIGCIV 309
LD +L G + +
Sbjct: 287 LDGRTYLNGKRLKSEDSL 304
>gi|114764443|ref|ZP_01443668.1| methionyl-tRNA formyltransferase [Pelagibaca bermudensis HTCC2601]
gi|114543010|gb|EAU46029.1| methionyl-tRNA formyltransferase [Roseovarius sp. HTCC2601]
Length = 221
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 82/147 (55%), Positives = 100/147 (68%), Gaps = 2/147 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+FMGT EF+V L ALV + H I +VY QPPRPAG RG K + VH +A+ L
Sbjct: 1 MRVIFMGTPEFSVPVLDALVEAGHEIAAVYCQPPRPAG-RGKKDRPTPVHARAKALGLEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P +E +F ADVAVVVAYGL++PQ IL+A G N HASLLPRWRGAAP
Sbjct: 60 RHPVSLKSPDEQARFAELKADVAVVVAYGLILPQAILDAPAKGCLNIHASLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGP 148
I RAI++GD +TGI IM+M+ LDTGP
Sbjct: 120 IHRAILSGDAQTGICIMQMEAGLDTGP 146
>gi|167971523|ref|ZP_02553800.1| methionyl-tRNA formyltransferase [Ureaplasma parvum serovar 6 str.
ATCC 27818]
gi|171920326|ref|ZP_02690479.3| methionyl-tRNA formyltransferase [Ureaplasma parvum serovar 1 str.
ATCC 27813]
gi|171902746|gb|EDT49035.1| methionyl-tRNA formyltransferase [Ureaplasma parvum serovar 1 str.
ATCC 27813]
gi|186701124|gb|EDU19406.1| methionyl-tRNA formyltransferase [Ureaplasma parvum serovar 6 str.
ATCC 27818]
Length = 305
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 83/308 (26%), Positives = 143/308 (46%), Gaps = 13/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSI--VSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M +V+F GT E A L+ L + H + ++V +QP R V S V + +
Sbjct: 1 MKYKVMFFGTPEIAKIVLETLFNM-HEVDLIAVVSQPDA-HFDRKKNVVYSPVKQFCLDH 58
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
++ P K+ + E E + D+ + A+G I Q I++ K N HASLLP+ RG
Sbjct: 59 NIKLFQPEKIKEIEEEIRI-LGPDIIITCAFGQFINQGIIDIPKYKIVNIHASLLPKLRG 117
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API AI+ G+ +TGI +M K +D G + F R + I+ T L EL+ L A +
Sbjct: 118 GAPIHYAILNGELKTGITLMHTIKKMDAGNILFQRSLEINDCTTTKSLTLELANLSALMI 177
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
E +L + NL Q EN +++A I K + +NF + A ++ + A+ P A ++
Sbjct: 178 KEHFLELVKPNLVGIQQDENSVSFAYNIQKDQNIINFDQPAFFINRFVNAMYDKPIAIMQ 237
Query: 239 MMIGNKHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ K+ + ++ + KPG ++ ++ + ++ +Q + L
Sbjct: 238 YNGVSI----KVYQVKITNQKSCQKPGTIVIFKNQLFVSTQDFDIELLLIQLPNKKPLSP 293
Query: 295 GDFLLGCP 302
L G
Sbjct: 294 KVLLNGRN 301
>gi|57504658|ref|ZP_00370736.1| methionyl-tRNA formyltransferase [Campylobacter coli RM2228]
gi|57019427|gb|EAL56122.1| methionyl-tRNA formyltransferase [Campylobacter coli RM2228]
Length = 305
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 81/315 (25%), Positives = 140/315 (44%), Gaps = 17/315 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
M +++FMGT +A L+AL+ + +++++TQP + G R S +
Sbjct: 1 MK-KIIFMGTPSYATCILKALLEDENFELLALFTQPDKAVG-RKQILTPSDTKAFLLQKA 58
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+P P L E + + +VVA I N HASLLP++R
Sbjct: 59 PQIPIFTPNSLKDESVIEQICALKPDFIVVAAYGKILP-KAILDIAPCINLHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PIQ AI+ D ++G+ M M++ LDTG V + I + ++
Sbjct: 118 GASPIQSAILNADEKSGVCTMLMEEGLDTGAVLESVECDIRDKNVNEVFEILANLAAKLT 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ ++ + Q E+ T+ K K E + +A ++ A +P+PG +L
Sbjct: 178 LSTLLNYEKLLPK---KQDESLATH-CKKIKKEDGLVSLDNAREIYQKYLAFTPWPGVFL 233
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
E N + I+L ++ K GE++ +F +AC QG +RI +LQ +G + LD
Sbjct: 234 E----NGLKFIELELVDELKQNAKMGEILELEKESFLLACKQGILRIKKLQESGKKALDG 289
Query: 295 GDFLLGCPVIIGCIV 309
+L G + +
Sbjct: 290 RTYLNGKRLKSADSL 304
>gi|157148862|ref|YP_001456181.1| hypothetical protein CKO_04700 [Citrobacter koseri ATCC BAA-895]
gi|157086067|gb|ABV15745.1| hypothetical protein CKO_04700 [Citrobacter koseri ATCC BAA-895]
Length = 268
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 90/270 (33%), Positives = 145/270 (53%), Gaps = 12/270 (4%)
Query: 48 LSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFY 106
S V A+E + P L +E + ++ DV VVVAYGL++P+ +L+ +LG
Sbjct: 2 PSPVKVLAEEKGIAVFQPASLRPQENQHLVADLHADVMVVVAYGLILPKAVLDMPRLGCI 61
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H SLLPRWRGAAPIQR++ AGD ETG+ IM+MD LDTG + + PI+ + L
Sbjct: 62 NVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITEKDTSGTL 121
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L+ L ++E + +LE Q T+AEK+SK E R+++ SA + I
Sbjct: 122 YDKLADLGPQGLIETLKQLENGTAKPEVQDNALATHAEKLSKEEARMDWSLSAAQLERCI 181
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRI 281
RA +P+P +W+E+ + +K+ ++ ++E + +PG ++ +A G + +
Sbjct: 182 RAFNPWPMSWMEI----DGQPVKVWQASVIERVTQAEPGTILDATKQGIQVATGNGILNL 237
Query: 282 MRLQRAGGRVLDIGDFLLGCP--VIIGCIV 309
+ LQ AG + + D L I G +
Sbjct: 238 LSLQPAGKKAMSAQDLLNSRREWFIPGNRL 267
>gi|149202186|ref|ZP_01879159.1| methionyl-tRNA formyltransferase [Roseovarius sp. TM1035]
gi|149144284|gb|EDM32315.1| methionyl-tRNA formyltransferase [Roseovarius sp. TM1035]
Length = 300
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 69/309 (22%), Positives = 118/309 (38%), Gaps = 16/309 (5%)
Query: 8 MGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MG F L L+ + +V+VY +P R + + + A E LP P
Sbjct: 1 MGQQAFGKDVLAKLLDTGTDEVVAVYCEPDRDG------KPVDPIKELALEKGLPVHQPA 54
Query: 67 KLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
+ L+ AD+ V+ + +P+ + G H SLLP RG + +
Sbjct: 55 NFDDPASLEVLAGHKADLMVMAFVNVFVPEAARDTPTHGSICFHPSLLPLHRGPSAVNWP 114
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV-EAMDK 184
I+ G ++G + LD G + I + L + A V D
Sbjct: 115 IIMGSTKSGYSWFYPSDGLDEGDSLLQWECEIGPDDTVIDLYFKKIYPHAVDSVLTVCDL 174
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
N P E+ TY + ++ R+ + R + V++ IR +P PGAW +
Sbjct: 175 FRAGNPPRIVPDEDQATYERRCTRTHARIEWHRPVKQVYDLIRGTNPAPGAWTTLNGAEV 234
Query: 245 HERIKLLESQLVEGEGKPGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+ + +V G+G G V + + C G + I R++ AGG + D+
Sbjct: 235 D----VYDCAIVAGDGISGRVRDVSDAGVAVQCVGGRILIKRVRPAGGAKMPASDWAASV 290
Query: 302 PVIIGCIVG 310
+ G +G
Sbjct: 291 GLAPGATLG 299
>gi|300896635|ref|ZP_07115152.1| methionyl-tRNA formyltransferase [Escherichia coli MS 198-1]
gi|300359512|gb|EFJ75382.1| methionyl-tRNA formyltransferase [Escherichia coli MS 198-1]
Length = 268
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 92/270 (34%), Positives = 146/270 (54%), Gaps = 12/270 (4%)
Query: 48 LSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFY 106
S V A+E +LP P L +E +Q ++ DV VVVAYGL++P+ +L +LG
Sbjct: 2 PSPVKVLAEEKALPVFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEMPRLGCI 61
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H SLLPRWRGAAPIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L
Sbjct: 62 NVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTL 121
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L+ L ++ + +L Q E +TYAEK+SK E R+++ SA + I
Sbjct: 122 YDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCI 181
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRI 281
RA +P+P +WLE+ + +K+ ++ +++ PG ++ +A G + +
Sbjct: 182 RAFNPWPMSWLEIEG----QPVKVWKASVIDTATNAAPGTILEANKQGIQVATGDGILNL 237
Query: 282 MRLQRAGGRVLDIGDFLLGCP--VIIGCIV 309
+ LQ AG + + D L + G +
Sbjct: 238 LSLQPAGKKAMSAQDLLNSRREWFVPGNRL 267
>gi|86149538|ref|ZP_01067768.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88597717|ref|ZP_01100950.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni 84-25]
gi|218561779|ref|YP_002343558.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|21542063|sp|Q9PJ28|FMT_CAMJE RecName: Full=Methionyl-tRNA formyltransferase
gi|85839806|gb|EAQ57065.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88190021|gb|EAQ93997.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112359485|emb|CAL34269.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|315926965|gb|EFV06327.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni DFVF1099]
Length = 305
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 23/318 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
M +++FMGT +A L+ALV + + +V+++TQP + G R S +
Sbjct: 1 MK-KIIFMGTPSYATCILKALVENENFKLVALFTQPDKAVG-RKQILTPSDTKAFLSQNY 58
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
S+P P+ L + + + +VVA I N HASLLP++R
Sbjct: 59 PSIPIFTPSSLKDKNIIREIKDLNPDFIVVAAYGKILP-KAILDLAPCVNLHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PIQ AI+ D ++G+ M M++ LDTG + + I ++ + ++
Sbjct: 118 GASPIQSAILNKDEKSGVCTMLMEEGLDTGAILESLECDIKDKNSSEVFELLANLAAKII 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ L + + E + + K E + ++A ++ A +P+PG +L
Sbjct: 178 L----STLLNFDKITPKKQEESLATLCRKIKKEDGLINLQNARELYQKYLAFTPWPGVFL 233
Query: 238 EMMIGNKHERIKLLESQLVEG---EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRV 291
E + K LE +LV+ K GE++ +F +AC QG +RI +LQ +G +
Sbjct: 234 ENGL-------KFLELELVDELKQNAKMGEILELEKESFLLACKQGVLRIKKLQESGKKA 286
Query: 292 LDIGDFLLGCPVIIGCIV 309
LD +L G + +
Sbjct: 287 LDGRTYLNGKRLKSEDSL 304
>gi|47459240|ref|YP_016102.1| methionyl-tRNA formyltransferase [Mycoplasma mobile 163K]
gi|47458569|gb|AAT27891.1| methionyl-tRNA formyltransferase [Mycoplasma mobile 163K]
Length = 278
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 66/291 (22%), Positives = 130/291 (44%), Gaps = 15/291 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++ GT +F+V + ++ + +V++ TQP + A RGLK+ S V A ++ +
Sbjct: 1 MKIILAGTPDFSVPIFEEIIK-KYEVVAIITQPDKQA-NRGLKTQESPVSFLANKYKIKL 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + + + + D + A+G IP IL K N H SLLP++RGAAPI
Sbjct: 59 F-KPEKISQIFHELEKLDFDFFLTAAFGQYIPTNILELPKKASLNIHGSLLPKYRGAAPI 117
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q AI+ GD +TGI+++ M K +D G + + I N + + ++S++ + + +
Sbjct: 118 QHAILNGDLKTGISLIYMTKKMDAGNILKTEEFEIYDNDDADSIFLKMSLIASKKINFWL 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + +N+ Q E T A K+ K + +++ + + +
Sbjct: 178 ESIMKNDFEEIVQDEFFATQAPKLLKEDAKIDLEKMTFEEIKNKVRAFSSNPGSYIFL-- 235
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLD 293
+R+K+ L I G + + Q G +++D
Sbjct: 236 -NKKRVKIFRVSLTN---------KKGLEIKYKNGLLYATKYQIEGKKIVD 276
>gi|257791460|ref|YP_003182066.1| methionyl-tRNA formyltransferase [Eggerthella lenta DSM 2243]
gi|257475357|gb|ACV55677.1| methionyl-tRNA formyltransferase [Eggerthella lenta DSM 2243]
Length = 318
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 101/316 (31%), Positives = 153/316 (48%), Gaps = 19/316 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT FA L L H + +VYT+P G RG + S V A+ L
Sbjct: 1 MRVVFMGTPAFAATILDDLAE-QHDVAAVYTRPDAVRG-RGKRLEPSPVKAAAERRGLRV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P + + SF DV V AYG ++P+ +L+ + G N HASLLPRWRGAAP
Sbjct: 59 LTPRTLRDEAAQRELASFAPDVICVAAYGAILPKEVLDIPRFGCLNVHASLLPRWRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I+RAI+AGD E G+ IM+M++ LDTG + + I + + L EL+ L +HA++ A
Sbjct: 119 IERAILAGDEEAGVCIMRMEEGLDTGAYC-VCRTAIVDGKSASELTDELADLGSHALLTA 177
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E++ + Q E +TYA KI K E ++ ++A S + +
Sbjct: 178 LVHVERDAAEWTEQDEEQVTYASKIEKRELDLSPNDDVALAARKVQASSAPHPSRAVVAG 237
Query: 242 GNKHERIKLLESQLVEGEG--------KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRV 291
+ +LE+ E +PGEV + + GA+ + L+ G +
Sbjct: 238 RG----VTVLEAHAPEDAAGCELAAGIRPGEVRFAGKRLFLGMADGALEVGALKPDGKQT 293
Query: 292 LDIGDFLLGCP-VIIG 306
+D F G + G
Sbjct: 294 MDARSFAAGVQGIKDG 309
>gi|284925391|gb|ADC27743.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni IA3902]
Length = 305
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 82/318 (25%), Positives = 145/318 (45%), Gaps = 23/318 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
M +++FMGT +A L+ALV + + +V+++TQP + G R S +
Sbjct: 1 MK-KIIFMGTPSYATCILKALVENENFKLVALFTQPDKAVG-RKQILTPSDTKAFLSQNY 58
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
S+P P+ L + + + +VVA I + N HASLLP++R
Sbjct: 59 PSIPIFTPSSLKDKNIIREIKDLNPDFIVVAAYGKILP-KVILDLAPCVNLHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PIQ AI+ D ++G+ M M++ LDTG + + I ++ + ++
Sbjct: 118 GASPIQSAILNKDEKSGVCTMLMEEGLDTGAILESLECDIKDKNSSEVFELLANLAAKLI 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ L + + E + + K E + ++A ++ A +P+PG +L
Sbjct: 178 L----STLLNFDKITPKKQEESLATLCRKIKKEDGLINLQNARELYQKYLAFTPWPGVFL 233
Query: 238 EMMIGNKHERIKLLESQLVEG---EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRV 291
E + K LE +LV+ K GE++ +F +AC QG +RI +LQ +G +
Sbjct: 234 ENGL-------KFLELELVDELKQNAKMGEILELEKESFLLACKQGVLRIKKLQESGKKA 286
Query: 292 LDIGDFLLGCPVIIGCIV 309
LD +L G + +
Sbjct: 287 LDGRTYLNGKRLKSEDSL 304
>gi|57237105|ref|YP_178117.1| methionyl-tRNA formyltransferase [Campylobacter jejuni RM1221]
gi|148926898|ref|ZP_01810576.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni CG8486]
gi|73919385|sp|Q5HX68|FMT_CAMJR RecName: Full=Methionyl-tRNA formyltransferase
gi|57165909|gb|AAW34688.1| methionyl-tRNA formyltransferase [Campylobacter jejuni RM1221]
gi|145844475|gb|EDK21583.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni CG8486]
gi|315057538|gb|ADT71867.1| Methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni S3]
Length = 305
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 82/318 (25%), Positives = 144/318 (45%), Gaps = 23/318 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
M +++FMGT +A L+ALV + + +V+++TQP + G R S +
Sbjct: 1 MK-KIIFMGTPSYATCILKALVENENFKLVALFTQPDKAVG-RKQILTPSDTKAFLSQNY 58
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
S+P P+ L + + + +VVA I N HASLLP++R
Sbjct: 59 PSIPIFTPSSLKDKNIIREIKDLNPDFIVVAAYGKILP-KAILDLAPCVNLHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PIQ AI+ D ++G+ M M++ LDTG + + I ++ + ++
Sbjct: 118 GASPIQSAILNKDEKSGVCTMLMEEGLDTGAILESLECDIKDKNSSEVFELLANLAAKLI 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ L + + E + + K E + ++A ++ A +P+PG +L
Sbjct: 178 L----STLLNFDKITPKKQEESLATLCRKIKKEDGLINLQNARELYQKYLAFTPWPGVFL 233
Query: 238 EMMIGNKHERIKLLESQLVEG---EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRV 291
E + K LE +LV+ K GE++ +F +AC QG +RI +LQ +G +
Sbjct: 234 ENGL-------KFLELELVDELKQNAKMGEILELEKESFLLACKQGVLRIKKLQESGKKA 286
Query: 292 LDIGDFLLGCPVIIGCIV 309
LD +L G + +
Sbjct: 287 LDGRTYLNGKRLKSEDSL 304
>gi|205356474|ref|ZP_03223238.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni CG8421]
gi|205345661|gb|EDZ32300.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni CG8421]
Length = 305
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 83/318 (26%), Positives = 144/318 (45%), Gaps = 23/318 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
M +++FMGT +A L+ALV + + +V+++TQP + G R S +
Sbjct: 1 MK-KIIFMGTPSYATCILKALVENENFKLVALFTQPDKAVG-RKQILTPSDTKAFLSQNY 58
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
S+P P+ L E + + +VVA I N HASLLP++R
Sbjct: 59 PSIPIFTPSSLKDENIIREIKDLNPDFIVVAAYGKILP-KAILDLAPCVNLHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PIQ AI+ D ++G+ M M++ LDTG + + I ++ + ++
Sbjct: 118 GASPIQSAILNKDEKSGVCTMLMEEGLDTGAILESLECDIKDKNSSEVFELLANLAAKLI 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ L + + E + + K E + ++A ++ A +P+PG +L
Sbjct: 178 L----STLLNFDKITPKKQEESLATLCRKIKKEDGLINLQNARELYQKYLAFTPWPGVFL 233
Query: 238 EMMIGNKHERIKLLESQLVEG---EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRV 291
E + K LE +LV+ K GE++ +F +AC QG +RI +LQ +G +
Sbjct: 234 ENGL-------KFLELELVDELKQNAKMGEILELEKESFLLACKQGVLRIKKLQESGKKA 286
Query: 292 LDIGDFLLGCPVIIGCIV 309
LD +L G + +
Sbjct: 287 LDGRTYLNGKRLKSEDSL 304
>gi|262091713|gb|ACY25303.1| methionyl-tRNA formyltransferase [uncultured actinobacterium]
Length = 304
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 71/308 (23%), Positives = 119/308 (38%), Gaps = 21/308 (6%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
++F GT + AV L++LV+S S+ V T + G RG S V K A E +P
Sbjct: 13 IIFFGTPDVAVGPLRSLVASGISVALVVTGADKRRG-RGGDISPSPVKKVAVELGIPISH 71
Query: 65 PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
+ + V IL N H SLLPRWRGAAP++R
Sbjct: 72 RVSDAIKLTKNHPETLGVVVAYGHIFSADALAILPM-----INIHYSLLPRWRGAAPVER 126
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
AI+ GD ETG++I+++ + LD G + ++ T L + L A A ++
Sbjct: 127 AILEGDRETGVSIIQVAQQLDAGNIIAQA---ATNISQTETLAELRLRLEALAEPLLLEV 183
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
+ PQ I + S + + K
Sbjct: 184 CLKGVASSRPQEGEPIVARKISSSDVRLDFLGSAEHACRQVRVGGA---------FSFIK 234
Query: 245 HERIKLLESQLVEGEGK-PGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+R+K+L ++L G GE+ +N + + + ++ + +Q G + + G
Sbjct: 235 GKRLKVLAAELAPGVALGAGEIQLVNGDVMVGFGENSILLRTVQLEGKPSSEASSWFNGA 294
Query: 302 PVIIGCIV 309
+ +G
Sbjct: 295 RISVGERF 302
>gi|104774279|ref|YP_619259.1| methionyl-tRNA formyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423360|emb|CAI98213.1| Methionyl-tRNA formyltransferase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 299
Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 87/299 (29%), Positives = 153/299 (51%), Gaps = 13/299 (4%)
Query: 19 QALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK-LGQEEYEQFL 77
+ L+ + + I++V TQP + G R K V S V + A LP P + +E ++ L
Sbjct: 2 EGLIKAGYHILAVVTQPDKKVG-RKQKVVYSPVKEVALANDLPLYQPVRLSKSDELDELL 60
Query: 78 SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAI 137
+AD + A+G +P + L + K+ N H SLLP++RG APIQ A+ GD ETG+ I
Sbjct: 61 QLDADFIITAAFGQFLPTKFLKSAKIAAVNVHGSLLPKYRGGAPIQYAVRNGDAETGVTI 120
Query: 138 MKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIE 197
M+M K +D G + +PI + + + +EL+ L ++E + K+ + PQ
Sbjct: 121 MEMVKEMDAGDMYAQASLPIRPDETSGEVFEELAPLGRDLLLETLPKIASGEIVKKPQDP 180
Query: 198 NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVE 257
+ + ++ ISK E R++ +A+ N IRAL+P PGA+L + +R+K+ ++++ +
Sbjct: 181 SQVVFSPTISKAEERISLKLTAKEAKNLIRALNPDPGAYLVIKG----QRLKVWKAEVAD 236
Query: 258 GE--GKPGEVINP--NFTIA-CSQGAVRIMRLQRAGGRVLDIGDFLL--GCPVIIGCIV 309
G ++ F I+ + ++ +Q G + + I DFL G G +
Sbjct: 237 DNTSLPAGHLLTNQGRFAISFAGNTVLNLLEVQPNGKKAMAIKDFLNGQGKKFAAGEKI 295
>gi|197119352|ref|YP_002139779.1| putative formyltransferase [Geobacter bemidjiensis Bem]
gi|197088712|gb|ACH39983.1| UDP-4-amino-4-deoxy-L-arabinose formyltransferase [Geobacter
bemidjiensis Bem]
Length = 303
Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 64/299 (21%), Positives = 117/299 (39%), Gaps = 10/299 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M +VV L+ L+ + V++ + + +V + A +
Sbjct: 1 MKDKVVVCAYHNVGYRCLEELIRQGADVRLVFSHEDSASE----EIWFRSVRELAARHGI 56
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L E E+ D + Y +I +L + G N H S LPR+RG
Sbjct: 57 PCLTGNVNDAENRERIAELAPDFLLSFYYRNMISPEVLTLARRGALNLHGSYLPRYRGRV 116
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI A++ G+ TG + M + D G + V I+ + +++ +
Sbjct: 117 PINWAVINGETSTGATLHYMVEKPDAGEIVDQEAVEIAFKDTAFDVFNKVTDAAVTVLRR 176
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEM 239
A +L P P Y + R+++ SA +++ +R P+PGA+ +
Sbjct: 177 AWPQLVAGTAPRIPMDLKAGNYCGGRKPEDGRIDWNLSARRIYDLVRGVTHPYPGAFTTL 236
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+++ + ++ VEG G+PG V++ + +G + I LQ G L DF
Sbjct: 237 AG----QKLLVWQAFPVEGAGEPGRVVSTRPLLVGTGEGLLEIRSLQLEGDTELSASDF 291
>gi|262340840|ref|YP_003283695.1| methionyl-tRNA formyltransferase [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272177|gb|ACY40085.1| methionyl-tRNA formyltransferase [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 319
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 82/315 (26%), Positives = 151/315 (47%), Gaps = 11/315 (3%)
Query: 1 MTL--RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M ++VF+G++ F++ +L+ L ++IV + T P ++ K S V K A E
Sbjct: 1 MKKFPKIVFIGSTHFSLFSLKELHIKQYNIVGIITSPDNFFHKKKEKM-FSPVKKYALEN 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P L + + L +V ++P+++ N K+G +N HASLLP++RG
Sbjct: 60 DIPFLQPINLLDNSFLRNLKKWNPDIQIVVSFRILPKKVWNFPKMGSFNLHASLLPQYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AAPI I+ G+N+TG+ K F +K+ I L+ +L + +
Sbjct: 120 AAPINWVIINGENQTGLTTFFHRKKNRLWKNTFTKKIEIEKEETAGELENKLKKMSGSMV 179
Query: 179 VEAMDKLEQNNLPLSPQ-IENGITYAEKISKGETRVNFCRS-AENVHNHIRALSPFPGAW 236
++ ++ + +N + + Q N + YA KIS + ++ + E+++N IR LSP P AW
Sbjct: 180 IKTLEGIIKNKIEPTDQKNVNSLKYAPKISTLDCKIQWDEPSIESIYNKIRGLSPLPTAW 239
Query: 237 LEM-MIGNKHERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGR 290
+ NK R K+ + + + G V + I+ +G + I+ Q G +
Sbjct: 240 TLLFFSKNKFVRFKIFTVKKIRKKHFFPIGFVFITSSFEMQISVKEGFISIIEGQIEGKK 299
Query: 291 VLDIGDFLLGCPVII 305
++I + + G +
Sbjct: 300 KMNIQNLINGIKIRK 314
>gi|237751005|ref|ZP_04581485.1| methionyl-tRNA formyltransferase [Helicobacter bilis ATCC 43879]
gi|229373450|gb|EEO23841.1| methionyl-tRNA formyltransferase [Helicobacter bilis ATCC 43879]
Length = 346
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 71/345 (20%), Positives = 134/345 (38%), Gaps = 40/345 (11%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ +VF+GT FA L+ L+ + H+I+SV TQP +P G R V + A ++P
Sbjct: 1 MNIVFLGTPLFAKEILEGLMKN-HTILSVITQPDKPFG-RKKILKAPEVKEYALANNIPC 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQ-RILNATKLGFYNGHASLLPRWRGAAP 121
P K + + ++ N H SLLP +RGA+P
Sbjct: 59 FQPEKSIDIIEILHNIDTKQKIEAIIVVAYGKILKKEIISRYICLNLHGSLLPHYRGASP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISS--NINTAGLQQELSVLCAHAMV 179
IQ +IM G++++ M++ LD+G +A ++ + N + L+ +
Sbjct: 119 IQTSIMNDYKHFGLSVIHMNEGLDSGNIAAIQAIEKDIVARKNVVEVFHILAPYGISLLE 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP--FPGAWL 237
+ ++ ++ N L +PQ + +Y +K++K + ++F S + + +
Sbjct: 179 KVLNDIKHNTLQTTPQNHDIASYCKKLTKNDCYLDFIDSYTCYLHFLALGHIGVWTKYKD 238
Query: 238 EMMIGNKHERIKLLESQLVEG------------------EGKP------------GEV-- 265
++ N + L S L + + P G +
Sbjct: 239 SVLKINMIQDYVLDNSVLSDSVLQDSSLKDPTLRDSKLQDSIPKDSMQNKVAKQKGTILA 298
Query: 266 INPNF-TIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
I N IAC GA+ I + + + FL + +G +
Sbjct: 299 IKQNMACIACENGALWIESVTPQNKSKMAMASFLQSQNLKVGESL 343
>gi|161506039|ref|YP_001573151.1| hypothetical protein SARI_04220 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160867386|gb|ABX24009.1| hypothetical protein SARI_04220 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 268
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 93/270 (34%), Positives = 148/270 (54%), Gaps = 12/270 (4%)
Query: 48 LSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFY 106
S V A+E LP P L +E + ++ DV VVVAYGL++P+ +L+ +LG
Sbjct: 2 PSPVKVMAEEKGLPVFQPVSLRPQENQHLVADLHADVMVVVAYGLILPKAVLDMPRLGCI 61
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H SLLPRWRGAAPIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L
Sbjct: 62 NVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGSL 121
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L+ L ++ + +L Q E +T+AEK+SK E R+++ SA + I
Sbjct: 122 YNKLAELGPQGLITTLKQLADGTATPEAQNEALVTHAEKLSKEEARIDWSLSAAQLERCI 181
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRI 281
RA +P+P +WLE+ + +K+ ++ ++EG + PG ++ +A +G + +
Sbjct: 182 RAFNPWPMSWLEI----DGQPVKVWQASVIEGATQSPPGTILAATKQGIQVATGKGILNL 237
Query: 282 MRLQRAGGRVLDIGDFLLGCP--VIIGCIV 309
+ LQ AG + + D L I G +
Sbjct: 238 LSLQPAGKKAMSAHDLLNSRREWFIPGNRL 267
>gi|78222104|ref|YP_383851.1| putative formyltransferase [Geobacter metallireducens GS-15]
gi|78193359|gb|ABB31126.1| Formyl transferase-like protein [Geobacter metallireducens GS-15]
Length = 311
Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 64/296 (21%), Positives = 116/296 (39%), Gaps = 10/296 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
RVV L+ L+ + V+T P + +V + AQ +P L
Sbjct: 10 RVVVCAYHNVGFRCLEELLKQGADVRLVFTHEDSPTE----EIWFQSVRELAQRHGIPYL 65
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+ D Y +I +L+ + G N H S LP++RG P+
Sbjct: 66 TSDINEPANVAKVREIAPDFLFSFYYRNMITPEVLDIPRKGALNLHGSYLPKYRGRVPVN 125
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
A++ G+ ETG + M + D G + KVPI+ + + +++ + +
Sbjct: 126 WAVINGETETGATLHHMVEKPDAGDIVDREKVPIAFTDTSFDVFTKVTDAAVTVISRSYP 185
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIG 242
L P P Y + +++ +SA ++N IR P+PGA+ +
Sbjct: 186 LLVAGTAPRIPMNLVEGNYCGGRRPADGLIDWTKSAVQIYNLIRGVTHPYPGAFTYL--- 242
Query: 243 NKHERIKLLESQLVEGEGKPGEVI-NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++I + ++ + G +PG V+ + +G + I LQ GG + G F
Sbjct: 243 -DGKKILVWSARPLPGSAEPGVVVTEDPLVVGTGEGLLEITSLQLEGGDEVAAGSF 297
>gi|189426677|ref|YP_001953854.1| formyltransferase [Geobacter lovleyi SZ]
gi|189422936|gb|ACD97334.1| formyl transferase domain protein [Geobacter lovleyi SZ]
Length = 298
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 62/294 (21%), Positives = 121/294 (41%), Gaps = 10/294 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++V ++ L+ I ++T P + S+V + A+ +P
Sbjct: 1 MKLVVCAYHNVGYRCIEELLRQGAEISLIFTHEDSPTE----QIWFSSVRELAEANRIPY 56
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L + E E+ D + Y +I +L G N H S LP++RG P+
Sbjct: 57 LTSSINEPENIEKVRKIAPDFLLSFYYRNMIKPELLELPARGALNLHGSWLPKYRGRVPV 116
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ ETG + M D G + KV I+ + +++ + A
Sbjct: 117 NWAVINGETETGATLHYMVAKPDAGDIVDQEKVAIAFTDTAHDVFGKVNEAAVTVLRRAW 176
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMI 241
+L + P +Y + R+++ +S+ ++N IR P+PGA+ E+
Sbjct: 177 PRLVDGSADRIPMDLAAGSYFGGRKPEDGRIDWTKSSVQIYNLIRGVTHPYPGAFTELNS 236
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN-PNFTIACSQGAVRIMRLQRAGGRVLDI 294
++ + + V G G+PG+V++ I G + + R+Q GG+ +
Sbjct: 237 M----KLLIWSAWPVAGSGQPGQVVSLKPLCIGTGDGLLELRRVQFEGGQEQEA 286
>gi|328887103|emb|CCA60342.1| formyltransferase [Streptomyces venezuelae ATCC 10712]
Length = 314
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 80/309 (25%), Positives = 139/309 (44%), Gaps = 19/309 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TLQAL+ S H +V V T P + K +V A E +P
Sbjct: 1 MRVVMFGYQTWGHRTLQALLDSEHDVVLVVTHP--KSEHAYEKIWSDSVADLATEHGVPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
++ + E + + + D+ V + IP I N + G N H SLLP++ G +P+
Sbjct: 59 VIRNRPDDELFARLKEADPDIIVANNWRTWIPPHIYNLPRHGTLNIHDSLLPKYAGFSPL 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ E G+ MD+ LD G + VP+ T L + L A ++A+
Sbjct: 119 IWALINGETEVGVTAHMMDEVLDAGDIVQQHAVPVGPTDTTTDLFHKTVDLIAPVTIDAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS-PFPGAWLEMMI 241
D++ +PQ + ++ K ++ + R+++ AE + +RA S P+P A+
Sbjct: 179 DRIAAGTAEFTPQDRSQASFFHKRAEEDIRIDWNWPAEVLERLVRAQSAPYPSAFTF--- 235
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAGG 289
+K R+++L + + EG G PG + I A + I R++ G
Sbjct: 236 -HKGRRLEILSAVVSEGRYGGTPGRIFYREGEGVVIVAGADARTGRNHGLAITRVRTEDG 294
Query: 290 RVLDIGDFL 298
R L ++
Sbjct: 295 RELPATEYF 303
>gi|71892001|ref|YP_277731.1| methionyl-tRNA formyltransferase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|123761480|sp|Q493I2|FMT_BLOPB RecName: Full=Methionyl-tRNA formyltransferase
gi|71796107|gb|AAZ40858.1| methionyl-tRNA formyltransferase [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 322
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 96/324 (29%), Positives = 159/324 (49%), Gaps = 24/324 (7%)
Query: 2 TLRVVFMGTSEFAVATLQAL-VSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+LR+ F GT+ FA L L S+H I++V+TQ + + KS LS +HK A+++++
Sbjct: 6 SLRIAFFGTTSFAAWHLHTLAHLSTHQIIAVFTQEIQISTC---KSFLS-LHKIAKKYNI 61
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ N D+ VVV+YGL++PQ ILN +LG N H SLLPRWRG
Sbjct: 62 SLFQSRTLSISDIIYIIKKINVDLIVVVSYGLILPQEILNIPRLGCINVHGSLLPRWRGP 121
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
APIQRA+ GD+ TGI I++MD +DTG + + I + L L + + +
Sbjct: 122 APIQRALEYGDSITGITIIQMDLGIDTGDILHIMPCKIFPKDTSCTLSNRLVNIGSAMLS 181
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ +D+ L PQ TYA K++K E R+N+ SA + IRA +P+P ++ ++
Sbjct: 182 QVLDQFILGTFTLIPQDSTYATYAHKLNKQEARINWNLSAIQLERCIRAFNPWPISFFQI 241
Query: 240 MIGNKHERIKLLESQLVEGEGK---------PGEVIN---PNFTIACSQGAVRIMRLQRA 287
RI++ ++++ PG ++ + G + + LQ +
Sbjct: 242 KND----RIRVWDAEVSNQNINNYSSSTSILPGTILAAHPNGIYVVTGSGILILTMLQIS 297
Query: 288 GGRVLDIGDFLLGCP--VIIGCIV 309
G ++ + D L ++
Sbjct: 298 GKKITSVRDLLNAYKEWFKPNSVL 321
>gi|213859536|ref|ZP_03385240.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 268
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 92/270 (34%), Positives = 147/270 (54%), Gaps = 12/270 (4%)
Query: 48 LSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFY 106
S V A+E LP P L +E + ++ DV VVVAYGL++P+ +L+ +LG
Sbjct: 2 PSPVKVLAEEKGLPVFQPVSLRPQENQHLVADLHADVMVVVAYGLILPKAVLDMPRLGCI 61
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H SLLPRWRGAAPIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L
Sbjct: 62 NVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITAEDTSGSL 121
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L+ L ++ + +L Q E +T+AEK+SK E R+++ SA + I
Sbjct: 122 YNKLAELGPQGLITTLKQLADGTATPEAQNEALVTHAEKLSKEEARIDWSLSAAQLERCI 181
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAVRI 281
RA +P+P +WLE+ + +K+ ++ ++E + PG ++ +A +G + +
Sbjct: 182 RAFNPWPMSWLEI----DGQPVKVWQASVIEDATQSLPGTILAATKQGIQVATGKGILNL 237
Query: 282 MRLQRAGGRVLDIGDFLLGCP--VIIGCIV 309
+ LQ AG + + D L I G +
Sbjct: 238 LSLQPAGKKAMSAQDLLNSRREWFIPGNRL 267
>gi|330958578|gb|EGH58838.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 663
Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats.
Identities = 75/314 (23%), Positives = 134/314 (42%), Gaps = 12/314 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ +VV + LQAL+ + + I +V+T P K+ +V + +
Sbjct: 1 MSTKVVVFAYHDIGCVGLQALLDADYEIAAVFTHADDPEE----KTFFGSVAQLCARHDI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E+ D Y ++ + +L K G +N H SLLPR+RG
Sbjct: 57 PVHAPEDPNHPLWIERVSKLAPDFIFSFYYRALLSEPLLACAKRGAFNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ ++ G+ ETG+ + KM K D GPV +++ IS+ + L +L +
Sbjct: 117 APVNWVLVNGETETGVTLHKMVKRADAGPVFAQQRISISATDSALTLHGKLREAAIALLS 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+A+ L ++ L +PQ E+ T + + + +++ A +++ IR P+PGA+
Sbjct: 177 DALPSLARDQLSGTPQDESLATCFGRRTPADGLIDWSLPAARLYDLIRAVTQPYPGAFCP 236
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQR--AGGRVLDIG 295
+ I + PG VI+ + IAC +G++ I QR G L
Sbjct: 237 VGDHK--LIIWAARVEPSNNGAAPGTVISHDPLRIACGEGSLIIHAGQRGNEG-LYLSGA 293
Query: 296 DFLLGCPVIIGCIV 309
++ G +
Sbjct: 294 QLAREFGLVQGSQL 307
>gi|86154012|ref|ZP_01072213.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|121612514|ref|YP_999822.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni 81-176]
gi|166214887|sp|A1VXI1|FMT_CAMJJ RecName: Full=Methionyl-tRNA formyltransferase
gi|85842426|gb|EAQ59640.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|87249063|gb|EAQ72025.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni 81-176]
Length = 305
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 83/318 (26%), Positives = 148/318 (46%), Gaps = 23/318 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
M +++FMGT +A L+ALV + + +V+++TQP + G R S +
Sbjct: 1 MK-KIIFMGTPSYATCILKALVENENFKLVALFTQPDKAVG-RKQILTPSDTKAFLSQNY 58
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
S+P P+ L E + + +VVA I + N HASLLP++R
Sbjct: 59 PSIPIFTPSSLKDENIIREIKDLNPDFIVVAAYGKILP-KAILDLVPCVNLHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PIQ AI+ D ++G+ M M++ LDTG + + I ++ + ++
Sbjct: 118 GASPIQSAILNKDEKSGVCTMLMEEGLDTGAILESLECDIKDKNSSEVFELLANLAAKLI 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ ++ + + Q E+ T + K E + ++A ++ A +P+PG +L
Sbjct: 178 LTTLLNF---DKITPKKQEESLAT-LCRKIKKEDGLINLQNARELYQKYLAFTPWPGVFL 233
Query: 238 EMMIGNKHERIKLLESQLVEG---EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRV 291
E + K LE +LV+ + GE++ +F +AC QG +RI +LQ +G +
Sbjct: 234 ENGL-------KFLELELVDELKQNARMGEILELEKESFLLACKQGVLRIKKLQESGKKA 286
Query: 292 LDIGDFLLGCPVIIGCIV 309
LD +L G + +
Sbjct: 287 LDGRTYLNGKRLKSEDSL 304
>gi|86151470|ref|ZP_01069685.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni 260.94]
gi|315123700|ref|YP_004065704.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85841817|gb|EAQ59064.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni 260.94]
gi|315017422|gb|ADT65515.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
Length = 305
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 82/318 (25%), Positives = 142/318 (44%), Gaps = 23/318 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
M +++FMGT +A L+ALV + + +V+++TQP + G R S +
Sbjct: 1 MK-KIIFMGTPSYATCILKALVENENFKLVALFTQPDKAVG-RKQILTPSDTKAFLSQNY 58
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
S+P P+ L E + + +VVA I N HASLLP++R
Sbjct: 59 PSIPIFTPSSLKDENIIREIKDLNPDFIVVAAYGKILP-KAILDLAPCVNLHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PIQ AI+ D ++G+ M M++ LDTG + + I ++ + +
Sbjct: 118 GASPIQSAILNKDEKSGVCTMLMEEGLDTGAILESLECDIKDKNSSEVFELLADLAAKLI 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ L + + E + + K E ++A ++ A +P+PG +L
Sbjct: 178 L----STLLNFDKITPKKQEESLATLCRKIKKEDGFINLQNARELYQKYLAFTPWPGVFL 233
Query: 238 EMMIGNKHERIKLLESQLVEG---EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRV 291
E + K LE +LV+ + GE++ +F +AC QG +RI +LQ +G +
Sbjct: 234 ENGL-------KFLELELVDELKQNARMGEILELEKESFLLACKQGVLRIKKLQESGKKA 286
Query: 292 LDIGDFLLGCPVIIGCIV 309
LD +L G + +
Sbjct: 287 LDGRTYLNGKRLKSEDSL 304
>gi|169629346|ref|YP_001702995.1| putative formyltransferase [Mycobacterium abscessus ATCC 19977]
gi|169241313|emb|CAM62341.1| Putative formyltransferase [Mycobacterium abscessus]
Length = 312
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 84/309 (27%), Positives = 144/309 (46%), Gaps = 18/309 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVF G + TLQAL+ H IV T P + + V + A+E +PA
Sbjct: 1 MRVVFFGYQTWGYRTLQALIDLGHEIVLAVTHP--MSEDAYKAIWAAPVEELAREHGIPA 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
++ E + S + DV VV ++ +P + + G N H SLLP++ G +P+
Sbjct: 59 HFTKRVDAETIDLVRSVDPDVIVVNSWYNRMPVELYDLPPYGTLNFHDSLLPKFTGFSPV 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A+++G++E G+ + +MD LDTG + R +PI L L + EA+
Sbjct: 119 LWALISGESEFGLTVHRMDSGLDTGDILVQRSLPIGPTDTGTELVLRGMELIPRVLAEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMI 241
+ LE + PQ + T+ K S+ ++ +++ AE++ +R P+P A+
Sbjct: 179 NALESGSAAWRPQNKAERTFCHKRSEQDSALDWAWPAEDLERFVRALSEPYPRAFAFYNT 238
Query: 242 GNKHERIKLLESQLVEGE--GKPG--EVINPNFTIACSQGA-------VRIMRLQRAGGR 290
ERI++LE+++ E G PG V + C GA + I R++RA G
Sbjct: 239 ----ERIEVLEARVSEARYGGTPGRVTVQEQGGAVVCGPGAHRAANRGLVITRIRRADGS 294
Query: 291 VLDIGDFLL 299
+ ++
Sbjct: 295 EVSGEEYFR 303
>gi|227883419|ref|ZP_04001224.1| methionyl-tRNA formyltransferase [Escherichia coli 83972]
gi|301046058|ref|ZP_07193237.1| methionyl-tRNA formyltransferase [Escherichia coli MS 185-1]
gi|227839563|gb|EEJ50029.1| methionyl-tRNA formyltransferase [Escherichia coli 83972]
gi|300301943|gb|EFJ58328.1| methionyl-tRNA formyltransferase [Escherichia coli MS 185-1]
Length = 268
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 90/270 (33%), Positives = 147/270 (54%), Gaps = 12/270 (4%)
Query: 48 LSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFY 106
S V A++ LP P L +E +Q ++ DV VVVAYGL++P+ +L +LG
Sbjct: 2 PSPVKVLAEDKGLPVFQPVSLRPQENQQRVADLQADVMVVVAYGLILPKAVLEMPRLGCI 61
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H SLLPRWRGAAPIQR++ AGD ETG+ IM+MD LDTG + + PI++ + L
Sbjct: 62 NVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTL 121
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L+ L ++ + +L Q E +TYAEK+SK E R+++ SA + I
Sbjct: 122 YDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCI 181
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRI 281
RA +P+P +WLE+ + +K+ ++ +++ + PG ++ +A G + +
Sbjct: 182 RAFNPWPMSWLEIEG----QPVKVWKASVIDTTTKAAPGTILEANKQGIQVATGDGILNL 237
Query: 282 MRLQRAGGRVLDIGDFLLGCP--VIIGCIV 309
+ +Q AG + + + D L + G +
Sbjct: 238 LSMQPAGKKAMSVQDLLNSRREWFVPGNRL 267
>gi|157414411|ref|YP_001481667.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni 81116]
gi|172046989|sp|A8FJQ3|FMT_CAMJ8 RecName: Full=Methionyl-tRNA formyltransferase
gi|157385375|gb|ABV51690.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni 81116]
gi|307747055|gb|ADN90325.1| Methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni M1]
gi|315931492|gb|EFV10459.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni 327]
Length = 305
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 83/318 (26%), Positives = 145/318 (45%), Gaps = 23/318 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
M +++FMGT +A L+ALV + + +V+++TQP + G R S +
Sbjct: 1 MK-KIIFMGTPSYATCILKALVENENFKLVALFTQPDKAVG-RKQILTPSDTKAFLSQNY 58
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
S+P P+ L E + + +VVA I N HASLLP++R
Sbjct: 59 PSIPIFTPSSLKDENIIREIKDLNPDFIVVAAYGKILP-KAILDLAPCVNLHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PIQ AI+ D ++G+ M M++ LDTG V + I ++ + ++
Sbjct: 118 GASPIQSAILNKDEKSGVCTMLMEEGLDTGAVLESLECDIKDKNSSEVFELLANLAAKLI 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ L + + + E + + K E + ++A ++ A +P+PG +L
Sbjct: 178 L----STLLNFDKIIPKKQEESLATLCRKIKKEDGLINLQNARELYQKYLAFTPWPGVFL 233
Query: 238 EMMIGNKHERIKLLESQLVEG---EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRV 291
E + K LE +LV+ + GE++ +F +AC QG +RI +LQ +G +
Sbjct: 234 ENGL-------KFLELELVDELKQNARMGEILELEKESFLLACKQGVLRIKKLQESGKKA 286
Query: 292 LDIGDFLLGCPVIIGCIV 309
LD +L G + +
Sbjct: 287 LDGRTYLNGKRLKSEDSL 304
>gi|224438551|ref|ZP_03659471.1| methionyl-tRNA formyltransferase [Helicobacter cinaedi CCUG 18818]
gi|313144977|ref|ZP_07807170.1| methionyl-tRNA formyltransferase [Helicobacter cinaedi CCUG 18818]
gi|313130008|gb|EFR47625.1| methionyl-tRNA formyltransferase [Helicobacter cinaedi CCUG 18818]
Length = 307
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 76/311 (24%), Positives = 127/311 (40%), Gaps = 9/311 (2%)
Query: 3 LRVVFMGTSEFAVATLQ-ALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS-- 59
+RV+ GT FA A L SS I+++ QP +P GR+G + + + +
Sbjct: 1 MRVILAGTPSFASAIFTPMLEDSSFEILALICQPDKPFGRKG-ELKAPHTKEMLTQKNLQ 59
Query: 60 -LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ L P+ + E D+ +VVAYG ++PQ L+ N HASLLP+WRG
Sbjct: 60 HIQILQPSSIDSAFIESIRDLKPDMILVVAYGKILPQAFLDIA--PCVNIHASLLPQWRG 117
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+PIQ+ +++ N GI MKM+ LD+G + + + T +Q + A+
Sbjct: 118 ASPIQQMLLSQPNFFGITAMKMNLQLDSGEILGFSYLANTEQNFTLLCEQLSHLGAKLAI 177
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
E L + K + P E
Sbjct: 178 HTLKHFNEIKPLKQYDLDSSYCGKIVKSCGKVE--LENAKSVYYAYLAYCEWPHIFIQSE 235
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
K + L+ES +G+ + + + + C G++RI LQ+ G + ++
Sbjct: 236 SGYTLKLFDLHLVESTQSHKQGEILSIDSQSIIVGCLMGSLRIGFLQQEGKAKIPAPLYI 295
Query: 299 LGCPVIIGCIV 309
G + IG I+
Sbjct: 296 NGKRLKIGDIL 306
>gi|283955542|ref|ZP_06373037.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni 1336]
gi|283793003|gb|EFC31777.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni 1336]
Length = 305
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 83/318 (26%), Positives = 145/318 (45%), Gaps = 23/318 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
M +++FMGT +A L+ALV + + +V+++TQP + G R S +
Sbjct: 1 MK-KIIFMGTPSYATCILKALVENENFKLVALFTQPDKAVG-RKQILTPSDTKAFLSQNY 58
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
S+P P+ L E + + +VVA I N HASLLP++R
Sbjct: 59 PSIPIFTPSSLKDENIIREIKDLNPDFIVVAAYGKILP-KAILDLAPCVNLHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PIQ AI+ D ++G+ M M++ LDTG + + I ++ + ++
Sbjct: 118 GASPIQSAILNKDEKSGVCTMLMEEGLDTGAILESLECDIKDKNSSEVFELLANLAAKLI 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ L + + E + + K E + ++A ++ A +P+PG +L
Sbjct: 178 L----STLLNFDKITPKKQEESLATLCRKIKKEDGLINLQNARELYQKYLAFTPWPGVFL 233
Query: 238 EMMIGNKHERIKLLESQLVEG---EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRV 291
E + K LE +LV+ + GE++ +F +AC QG +RI +LQ +G +V
Sbjct: 234 ENGL-------KFLELELVDELKQNARMGEILELEKESFLLACKQGVLRIKKLQESGKKV 286
Query: 292 LDIGDFLLGCPVIIGCIV 309
LD +L G + +
Sbjct: 287 LDGRTYLNGKRLKSEDSL 304
>gi|168281662|ref|ZP_02689329.1| methionyl-tRNA formyltransferase [Ureaplasma parvum serovar 14 str.
ATCC 33697]
gi|182675873|gb|EDT87778.1| methionyl-tRNA formyltransferase [Ureaplasma parvum serovar 14 str.
ATCC 33697]
Length = 305
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 82/308 (26%), Positives = 143/308 (46%), Gaps = 13/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSI--VSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M +V+F GT E A L+ L + H + ++V +QP R + S V + +
Sbjct: 1 MKYKVMFFGTPEIAKIVLETLFNM-HEVDLIAVVSQPDA-HFDRKKNVIYSPVKQFCLDH 58
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
++ P K+ + E E + D+ + A+G I Q I++ K N HASLLP+ RG
Sbjct: 59 NIKLFQPEKIKEIEEEIRI-LGPDIIITCAFGQFINQGIIDIPKYKIVNIHASLLPKLRG 117
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API AI+ G+ +TGI +M K +D G + F R + I+ T L EL+ L A +
Sbjct: 118 GAPIHYAILNGELKTGITLMHTIKKMDAGNILFQRSLEINDCTTTKSLTLELANLSALMI 177
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
E +L + NL Q EN +++A I K + +NF + A ++ + A+ P A ++
Sbjct: 178 KEHFLELVKPNLVGVQQDENSVSFAYNIQKDQNIINFDQPAFFINRFVNAMYDKPIAIMQ 237
Query: 239 MMIGNKHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ K+ + ++ + KPG ++ ++ + ++ +Q + L
Sbjct: 238 YNGVSI----KVYQVKITNQKSCQKPGTIMIFKNQLFVSTQDFDIELLLIQLPNKKPLSP 293
Query: 295 GDFLLGCP 302
L G
Sbjct: 294 KVLLNGKN 301
>gi|13358026|ref|NP_078300.1| methionyl-tRNA formyltransferase [Ureaplasma parvum serovar 3 str.
ATCC 700970]
gi|170762040|ref|YP_001752548.1| methionyl-tRNA formyltransferase [Ureaplasma parvum serovar 3 str.
ATCC 27815]
gi|21542064|sp|Q9PQ27|FMT_UREPA RecName: Full=Methionyl-tRNA formyltransferase
gi|189044551|sp|B1AJA4|FMT_UREP2 RecName: Full=Methionyl-tRNA formyltransferase
gi|11356979|pir||H82888 methionyl-tRNA formyltransferase UU463 [imported] - Ureaplasma
urealyticum
gi|6899456|gb|AAF30875.1|AE002142_9 methionyl-tRNA formyltransferase [Ureaplasma parvum serovar 3 str.
ATCC 700970]
gi|168827617|gb|ACA32879.1| methionyl-tRNA formyltransferase [Ureaplasma parvum serovar 3 str.
ATCC 27815]
Length = 305
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 82/308 (26%), Positives = 143/308 (46%), Gaps = 13/308 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSI--VSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M +V+F GT E A L+ L + H + ++V +QP R + S V + +
Sbjct: 1 MKYKVMFFGTPEIAKIVLETLFNM-HEVDLIAVVSQPDA-HFDRKKNVIYSPVKQFCLDH 58
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
++ P K+ + E E + D+ + A+G I Q I++ K N HASLLP+ RG
Sbjct: 59 NIKLFQPEKIKEIEEEIRI-LGPDIIITCAFGQFINQGIIDIPKYKIVNIHASLLPKLRG 117
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API AI+ G+ +TGI +M K +D G + F R + I+ T L EL+ L A +
Sbjct: 118 GAPIHYAILNGELKTGITLMHTIKKMDAGNILFQRSLEINDCTTTKSLTLELANLSALMI 177
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
E +L + NL Q EN +++A I K + +NF + A ++ + A+ P A ++
Sbjct: 178 KEHFLELVKPNLVGIQQDENSVSFAYNIQKDQNIINFDQPAFFINRFVNAMYDKPIAIMQ 237
Query: 239 MMIGNKHERIKLLESQLVEGEG--KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ K+ + ++ + KPG ++ ++ + ++ +Q + L
Sbjct: 238 YNGVSI----KVYQVKITNQKSCQKPGTIMIFKNQLFVSTQDFDIELLLIQLPNKKPLSP 293
Query: 295 GDFLLGCP 302
L G
Sbjct: 294 KVLLNGKN 301
>gi|283955264|ref|ZP_06372764.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni 414]
gi|283793178|gb|EFC31947.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni 414]
Length = 305
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 83/318 (26%), Positives = 142/318 (44%), Gaps = 23/318 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF- 58
M +++FMGT +A L+A++ + + +V+++TQP + G R S +
Sbjct: 1 MK-KIIFMGTPSYATCVLRAILENDNFKLVALFTQPDKAVG-RKKILTSSHTKTFLSKNY 58
Query: 59 -SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+P P L E+ + +VVA I N HASLLP++R
Sbjct: 59 PDIPVFTPKFLKDEKVIAQIRSLKPDFIVVAAYGKILP-KAILDLAPCVNLHASLLPKYR 117
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PIQ AI+ D ++G+ M M++ LDTG V + I ++ + ++
Sbjct: 118 GASPIQSAILNKDEKSGVCTMLMEEGLDTGAVLESLECDIKDKNSSEVFELLANLAAKLI 177
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
++ + Q E+ T K K E + +A ++ A +P+PG +L
Sbjct: 178 SSTLLNFEKIIPK---KQDESLATI-CKKIKKEDGLVNLENARELYQKYLAFTPWPGVFL 233
Query: 238 EMMIGNKHERIKLLESQLVEG---EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRV 291
E + K LE +LV+ K GE++ +F +AC QG +RI +LQ +G +
Sbjct: 234 ENGL-------KFLELELVDELKQNAKMGEILELEKESFLLACKQGVLRIKKLQESGKKA 286
Query: 292 LDIGDFLLGCPVIIGCIV 309
LD +L G + +
Sbjct: 287 LDGRTYLNGKRLKSADSL 304
>gi|170740790|ref|YP_001769445.1| methionyl-tRNA formyltransferase [Methylobacterium sp. 4-46]
gi|168195064|gb|ACA17011.1| Methionyl-tRNA formyltransferase [Methylobacterium sp. 4-46]
Length = 310
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 77/315 (24%), Positives = 133/315 (42%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ +G +F A L+A + ++ V+ P R G K A+ ++A+ LP
Sbjct: 1 MRIALIGQQDFGKAVLEAFLERGDTVAGVFCAPDR----EGAK--PDALKREAEARGLPL 54
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L ++ + +AD+ V+ PQ + + G H SLLP +RG +
Sbjct: 55 HQFPSLKSQDAADTLRALDADLGVMAYVLQFAPQSFVTIPRHGTIQYHPSLLPAYRGPSS 114
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCAHAMVE 180
I I GD TG++I + LD GPV + I + + + AM+E
Sbjct: 115 INWPIAKGDARTGLSIFRPTDGLDEGPVILQKTCEIGPDDTLGDVYFGRLFPMGVAAMLE 174
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A D + Q E +Y S R+++ ++++N IRA +P PGAW +
Sbjct: 175 AADLVVAGRHREVVQDEAQASYEGWFSAKAARLSWDSHIDHLYNLIRAANPAPGAWTTLE 234
Query: 241 IGN--KHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+ K ++ E +G GEV+ + I G + + +L+ GG + G
Sbjct: 235 GRKLQFFDCRKHPVRRIAEVKGALGEVVAVGEESIRITAQGGQIELFKLKPEGGSKMSAG 294
Query: 296 DFLLGCPVIIGCIVG 310
F + +G I+G
Sbjct: 295 AFAREGGIRVGHILG 309
>gi|268679147|ref|YP_003303578.1| methionyl-tRNA formyltransferase [Sulfurospirillum deleyianum DSM
6946]
gi|268617178|gb|ACZ11543.1| methionyl-tRNA formyltransferase [Sulfurospirillum deleyianum DSM
6946]
Length = 319
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 83/315 (26%), Positives = 134/315 (42%), Gaps = 16/315 (5%)
Query: 2 TLRVVFMGTSEFAVATLQAL-VSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
L++VFMGT +A L+AL + S ++ + TQ +P G R E L
Sbjct: 13 KLKIVFMGTPSYATTILEALCLEPSIEVILLVTQEDKPVG-RKQLLTPPHTKAWLLEQGL 71
Query: 61 PALVPTKLGQEEYEQFLS---FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+ E D VV AYG ++P+ +L+ N HASLLP++R
Sbjct: 72 HVEIFQPKTLRCKEAQEKIAACRPDFIVVAAYGQILPREVLDIA--PCINLHASLLPKYR 129
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+PIQ A++AG+ TG+ M M++ LDTG + + I N + L LS A
Sbjct: 130 GASPIQSALLAGEVYTGVTSMLMEEGLDTGAMLGFSYLKIEPEHNASLLFNALSSCAARL 189
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ + Q+ T+ +KI K + V+F A + H +ALSP+PG +L
Sbjct: 190 TLTTLKNFAALLP--IQQVSANATHCKKIKKEDGLVSFELDAIEIMKHFKALSPWPGIYL 247
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDI 294
E + + + + G + + C +G V + LQ +
Sbjct: 248 ESGL----KLLDICLVDESSCNASVGMIDGIETEGIILTCKKGKVLLKILQPVSKNAMPA 303
Query: 295 GDFLLGCPVIIGCIV 309
D++ G + G +
Sbjct: 304 VDYIRGKRLGRGDTL 318
>gi|328947002|ref|YP_004364339.1| methionyl-tRNA formyltransferase [Treponema succinifaciens DSM
2489]
gi|328447326|gb|AEB13042.1| Methionyl-tRNA formyltransferase [Treponema succinifaciens DSM
2489]
Length = 337
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 79/341 (23%), Positives = 144/341 (42%), Gaps = 40/341 (11%)
Query: 3 LRVVFMGTSEFAVATLQALV----------SSSHSIVSVYTQPPRPAGRRGLKSVLSAVH 52
L+V+F G+ A L+ ++ + IV V T PP G R + + + V
Sbjct: 2 LKVLFGGSPACAAKALELILKDSAMSNSVPEEEYKIVGVLTNPPSAQG-RHKELIPTEVE 60
Query: 53 KKA------QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFY 106
+ A + +L P + Q E EQ S D+ V AYG ++ + + K G
Sbjct: 61 QYAIIWNRARNDNLAVFTPEHIKQPEREQIASLEPDIFVCFAYGHILGPKFFSLFKFGGI 120
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H SLLP++RGA P+ AI+ D+ETG +I KM +D G + + +K ++ +
Sbjct: 121 NLHPSLLPKYRGATPVNAAILNCDDETGFSIQKMALGMDEGDILYQQKERLTGTETAEQV 180
Query: 167 QQELSVLCAHAMVEAMDKLEQNN--LPLSPQIENGITYAEKISKGETRVNFCRSAENVHN 224
+ ++ + + + K+ + PQ + + +N+ SAE +
Sbjct: 181 LKNSALYGGMNITQILRKIAKTGKLPASFPQEGKASYCSIIKKEDGK-INWNNSAEKIDA 239
Query: 225 HIRALSPFPGAWLEMMIGNKHERIKLLESQ------------LVEGEGKPGEVIN----P 268
IRA +P+PG + + + ++K+L+++ + PG V++
Sbjct: 240 QIRAYTPWPGCFTT----SGNLQLKILKARAASKVAAQDSSVVKNTSAVPGTVLDYNKQR 295
Query: 269 NFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
I G + LQ + +D F+ G IG ++
Sbjct: 296 GILIQTGNGVLIATELQWQAKKAMDYKSFMNGARNFIGTVL 336
>gi|269138646|ref|YP_003295347.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Edwardsiella tarda EIB202]
gi|267984307|gb|ACY84136.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Edwardsiella tarda EIB202]
gi|304558657|gb|ADM41321.1| Polymyxin resistance protein ArnA-DH, UDP-glucuronic acid
decarboxylase [Edwardsiella tarda FL6-60]
Length = 659
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 69/310 (22%), Positives = 131/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + A +Q+L+ + + I ++ T P G +V + A + ++P
Sbjct: 1 MKAVVFAYHDMGCAGVQSLIDAGYEIAAIVTHQDAP----GENLFFGSVARLAAQHNIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ + V Y ++ IL G +N H SLLP +RG AP
Sbjct: 57 FAPDDVNHPLWVERLRALQPQVIFSFYYRHLLSDAILTLAPQGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M+ D G + R++ I+ L +L + EA
Sbjct: 117 LNWVLVNGETETGVTLHRMETRADAGNIIAQRRIAIAEEDTALTLHHKLCQCARALLAEA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ + PQ E+ TY + + + R+ + + A ++N +R P+PGA+
Sbjct: 177 LPQIRGGSYAEFPQDESAATYVGRRTPADGRLEWSKPARALYNLVRAVTEPWPGAFSYAG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ S L +PG V++ + TIAC GA+ I+ Q G +
Sbjct: 237 NRQFTVWQARVRSDL--PAARPGTVLSASPLTIACGDGALEIVAGQPQDGLYMQGSQLAE 294
Query: 300 GCPVIIGCIV 309
++ G I+
Sbjct: 295 SLGLVEGAIL 304
>gi|226325271|ref|ZP_03800789.1| hypothetical protein COPCOM_03063 [Coprococcus comes ATCC 27758]
gi|225206619|gb|EEG88973.1| hypothetical protein COPCOM_03063 [Coprococcus comes ATCC 27758]
Length = 139
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 55/135 (40%), Positives = 83/135 (61%), Gaps = 2/135 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++FMGT +F+V TL+ALV + H +V TQP +P G RG + + V + A ++P
Sbjct: 1 MKIIFMGTPDFSVGTLEALVEAGHEVVLAVTQPDKPKG-RGKEMQFTPVKECALAHNIPV 59
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P K+ + E + + ADV VVVA+G ++P+ IL T G N HASLLP++RGAAP
Sbjct: 60 YQPKKIREPECIEELKKYQADVCVVVAFGQILPKEILEMTPYGCINVHASLLPKYRGAAP 119
Query: 122 IQRAIMAGDNETGIA 136
IQ A++ G+
Sbjct: 120 IQWAVINGEKSIRCH 134
>gi|255026917|ref|ZP_05298903.1| methionyl-tRNA formyltransferase [Listeria monocytogenes FSL
J2-003]
Length = 247
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 88/254 (34%), Positives = 139/254 (54%), Gaps = 8/254 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L L +S++ +V+V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPEFSVPVLTQL-ASTYDVVAVVTQPDRPVG-RKRVLTPPPVKKAALELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E E+ ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSKLGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ +T+A IS+ + ++++ + + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITAIPQNPEKVTFARNISREQEKIDWTKPGRTIFNQIRGLSPWPVAYTTL 237
Query: 240 MIGNKHERIKLLES 253
+ K+ E+
Sbjct: 238 EE----KPFKIWEA 247
>gi|144575152|gb|AAZ43932.2| methionyl-tRNA formyltransferase [Mycoplasma synoviae 53]
Length = 280
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 82/293 (27%), Positives = 143/293 (48%), Gaps = 15/293 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++V GT EF+V + ++ + +V++ TQP +PA +RG S V K A +++L
Sbjct: 1 MT-KIVLAGTPEFSVPIFKEIIKN-FEVVAIVTQPDKPA-KRGQNLQESPVKKLALKYNL 57
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ YE+ + D + A+G IP+ ILN K N H SLLP++RGAA
Sbjct: 58 KLF-QPEKISMIYEELKELDFDYMLTAAFGQYIPENILNLPKKFPLNIHGSLLPKYRGAA 116
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ A++ + ETG+ ++ M K +D G + K+ I + + L ++LS L A +V
Sbjct: 117 PIQHALLNNETETGVQLIIMTKKMDAGDILKEAKIKIEESDISLTLFEKLSNLAAENIVS 176
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L+QNN Q E+ +T A K+ K ++ ++ ++ + I+A + PGA
Sbjct: 177 WIHDLDQNNYQRIIQDESKVTLASKLLKEDSFLDKTKTKKENIAKIKAFALNPGAR---Y 233
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLD 293
I ++ +K+ + + I C G + + Q + +
Sbjct: 234 INENNKLVKVYFATENK--------IKNAPVFTCVDGDIFLNDYQIESKKRVT 278
>gi|297838169|ref|XP_002886966.1| hypothetical protein ARALYDRAFT_894179 [Arabidopsis lyrata subsp.
lyrata]
gi|297332807|gb|EFH63225.1| hypothetical protein ARALYDRAFT_894179 [Arabidopsis lyrata subsp.
lyrata]
Length = 355
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 78/330 (23%), Positives = 144/330 (43%), Gaps = 29/330 (8%)
Query: 5 VVFMGTSEFAVATLQALVS------SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
++F+G+ + +V L+AL + SS + + TQPP RG K + S V + A +
Sbjct: 27 LIFLGSPQVSVTVLEALFNASAAPNSSFEVAGIVTQPPSRR-DRGRKVLPSPVAQYALDK 85
Query: 59 SLP----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
LP + ++ + AYG ++P + L G N H SLLP
Sbjct: 86 GLPSDLIFSPEKAGDEAFLSALRELQPELCITAAYGNILPTKFLKIPLHGTVNIHPSLLP 145
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
+RGAAP+QRA+ G ETG+++ + LD GPV ++ + I L L
Sbjct: 146 LYRGAAPVQRALQDGVPETGVSLAFTVRKLDAGPVIASKRFQVDDLIKAPELLSFLFSEG 205
Query: 175 AHAMVEAMDKLEQNNLPLS--PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ ++ + + + PQ ++ T A KI+ E ++F A +HN +RA + +
Sbjct: 206 SKLLIRELPSIFDGSAKSKAAPQDDSKATLAPKIAPDEAWLSFDEEAFVLHNKVRAFAGW 265
Query: 233 PGAWLEMMI------GNKHERIKLLESQLVEG-EGKPG-----EVINPNFTIACSQG-AV 279
PG ++++ +K++ +++ + E + G + C G A+
Sbjct: 266 PGTRAKVVVLDDKSGQQNVLELKIMSTRVCKDLEIQDGGQDYVTFKKGSLVFPCGGGTAL 325
Query: 280 RIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
++ +Q G + ++ F G G +
Sbjct: 326 EVLEVQLPGKKAINAAAFWNGLR---GQKL 352
>gi|323456440|gb|EGB12307.1| hypothetical protein AURANDRAFT_3701 [Aureococcus anophagefferens]
Length = 319
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 93/319 (29%), Positives = 155/319 (48%), Gaps = 22/319 (6%)
Query: 5 VVFMGTSEFAVATLQALVSS-------SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
VVF+G+ A TL+AL+ + +V+ +QPP P G R S VH+ A+
Sbjct: 1 VVFLGSPGVAALTLEALLDASAEGRGGGFEVVAAVSQPPAPKG-RKRALAKSEVHELAEA 59
Query: 58 FSLPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+P L P E+ L + D+ V AYG +P+ L K G N H SLLPRW
Sbjct: 60 RGVPCLTPASARDPEFLAALEALDVDLCVTAAYGQFLPKAFLAIPKHGTMNVHPSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAP+QR++ AGD E G+ +++ +D GPVA R + + A L EL + A
Sbjct: 120 RGAAPLQRSLEAGDAEVGVTVLRTVLKMDAGPVAAQRTRAVEDGDDCAALLDELFGVGAQ 179
Query: 177 AMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVN-------FCRSAENVHNHIRA 228
+V+ + + PQ + T A K++K E ++ +A + +RA
Sbjct: 180 LLVDDVMPGLWDGTLECEPQDGDLATEAPKLTKDEGALDLGGPGDDGRSAARRAADKVRA 239
Query: 229 LSPFPGAWLEMMIGNKH--ERIKLLESQLVEGEGKPGEV--INPNFTIACSQG-AVRIMR 283
+P+PG + + +G+K ER+K+L +++ G + + + C+ G A+ +++
Sbjct: 240 FTPWPGTHVPVRVGDKPDVERLKILAARVAPECPAGGALAKVGKAVLLPCADGSALELLK 299
Query: 284 LQRAGGRVLDIGDFLLGCP 302
+Q A + +D + G
Sbjct: 300 VQPANRKPMDAAAYWNGLR 318
>gi|330890233|gb|EGH22894.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. mori
str. 301020]
Length = 114
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/111 (45%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L+AL+ S + IV+VYTQP RPAG RG K + S V + A + +P
Sbjct: 4 PLRIVFAGTPEFAAEHLKALLDSPYQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQHDIP 62
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
+ P L + + L+ D+ VVVAYGL++PQ +L+ +LG N HAS
Sbjct: 63 VMQPPTLRAPDAQAELAALKPDLMVVVAYGLILPQVVLDIPRLGCINSHAS 113
>gi|99036099|ref|ZP_01315132.1| hypothetical protein Wendoof_01000022 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 294
Score = 113 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 95/296 (32%), Positives = 147/296 (49%), Gaps = 12/296 (4%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MG+ FAV +L L+ S +V+VYT+ PRP+G RG K S VH A+E ++ P
Sbjct: 1 MGSPGFAVNSLSLLLKSKSEVVAVYTKAPRPSG-RGQKPTKSPVHVIAEESNIEVCTPIS 59
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
E E+F +F DVAVV AYGL++P+ ILN K G N H SLLPRWRGAAPIQ I
Sbjct: 60 LKFSAEQEKFRNFKPDVAVVAAYGLILPREILNIPKYGCINIHPSLLPRWRGAAPIQHTI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+AGD ETG++IM++D+ LD+G + I + L + + + K+
Sbjct: 120 LAGDQETGVSIMQLDEGLDSGTILKQ----EKFLIEKNDNYKTLHDKLSKLGSDLLLKVL 175
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
P +N + ++ + E + ++A P + I +++
Sbjct: 176 NEIEKQLPLKQNDNDACYADKVEDYKIYASDACEVAYRKVKAFYP------KAFIKIENK 229
Query: 247 RIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
RI++L++ + G+++N N I+ G + +Q G I DF+ G
Sbjct: 230 RIRILDADFEALASEQGKIVNDNMHISLKGGTLIPKVVQMEGRNPCSIEDFIRGLK 285
>gi|331647913|ref|ZP_08349005.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli M605]
gi|330912085|gb|EGH40595.1| polymyxin resistance protein ArnA [Escherichia coli AA86]
gi|331043637|gb|EGI15775.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli M605]
Length = 660
Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 69/310 (22%), Positives = 134/310 (43%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+S+ + I +++T P G K+ S+V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLSAGYEISAIFTHTDNP----GEKAFYSSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPRGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|27262478|gb|AAN87520.1| Methionyl-tRNA formyltransferase [Heliobacillus mobilis]
Length = 163
Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 66/147 (44%), Positives = 92/147 (62%), Gaps = 1/147 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT +FAV TL+A+VS+ H++ V ++P +P G RG K + S V + A LP
Sbjct: 5 MRVVFMGTPDFAVPTLEAIVSAGHTVSLVVSRPDKPRG-RGQKPLPSPVKEAALAMGLPV 63
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P KL + ++ DV VV A+G ++P+ +L A G+ N HASLLPR+RGAAPI
Sbjct: 64 EHPAKLDGDFIQRLRDLKVDVGVVAAFGRILPKALLEALPKGWINVHASLLPRYRGAAPI 123
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPV 149
R+++ GD ETGI M M + LD
Sbjct: 124 HRSVINGDAETGITTMLMSEGLDEVCF 150
>gi|170682848|ref|YP_001744454.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli SMS-3-5]
gi|226723715|sp|B1LLK9|ARNA_ECOSM RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|170520566|gb|ACB18744.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli SMS-3-5]
Length = 660
Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 70/312 (22%), Positives = 142/312 (45%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I +IL G +N H SLLP++RG AP
Sbjct: 57 YAPDDVNHPLWVERIAQLSPDVIFSFYYRHLIHDKILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + +SA +HN +R P+PGA+ +
Sbjct: 177 LPAIKDGNILEIAQCENEATCFGRRTPEDSFLEWHKSAAVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+++ + S++ +PG VI+ IAC GA+ I+ Q GG +
Sbjct: 237 ----NQKFTVWSSRVHSHAPAAQPGSVISVAPLLIACGDGALEIVTGQAGGGITMQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G +
Sbjct: 293 AQTLGLVQGSRL 304
>gi|271502704|ref|YP_003335730.1| NAD-dependent epimerase/dehydratase [Dickeya dadantii Ech586]
gi|270346259|gb|ACZ79024.1| NAD-dependent epimerase/dehydratase [Dickeya dadantii Ech586]
Length = 663
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 71/312 (22%), Positives = 140/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V +F L+ALV++ +++ +V+T PA + +V + A E +P
Sbjct: 1 MKAVVFAYHDFGCVGLRALVAAGYTVEAVFTHADNPAENQ----FFGSVARTAAELGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ + + DV Y ++ IL + G YN H SLLPR+RG AP
Sbjct: 57 FAPEDVNHPLWVERIAAMSPDVIFSFYYRHLLSDAILQSAAHGAYNLHGSLLPRYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG+ + +M D G + ++V I + L +L + + + ++
Sbjct: 117 LNWALVNGETETGVTLHRMVARADAGNIVAQQRVAIDESDTALSLHHKLRDVASQLLKDS 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + PQ E+ TY + + + R+ + + A ++N +R P+PGA+ +
Sbjct: 177 LPAIAAGKANDIPQDESQATYVGRRTPEDGRIEWQKPARALYNLVRAVTEPWPGAFSFVG 236
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + ++++ KPG V++ + +AC A+ I+ Q G L
Sbjct: 237 TT----KFIIWQAKVRTDFAAAKPGTVLSTSPLVVACGNDALEIVTGQGDNGIYLQGAQL 292
Query: 298 LLGCPVIIGCIV 309
++ G I+
Sbjct: 293 AQSLGLVTGAIL 304
>gi|124023144|ref|YP_001017451.1| methionyl-tRNA formyltransferase [Prochlorococcus marinus str. MIT
9303]
gi|259646045|sp|A2C9M6|FMT_PROM3 RecName: Full=Methionyl-tRNA formyltransferase
gi|123963430|gb|ABM78186.1| putative Methionyl-tRNA formyltransferase [Prochlorococcus marinus
str. MIT 9303]
Length = 342
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 91/337 (27%), Positives = 152/337 (45%), Gaps = 33/337 (9%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
+F GT +AV TL AL S + IV V +QP R G RG + + S V ++A + L P
Sbjct: 2 LFWGTPSYAVPTLDALNDSGYEIVGVVSQPDRRRG-RGNQQMASPVKQRAMDQGLRVFTP 60
Query: 66 TKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
++ E Q S AD++VVVA+G ++P +LN LG +NGHASLLPRWRGA PIQ
Sbjct: 61 ERIRDEGNVQAELKSLKADISVVVAFGQLLPSTVLNQPPLGCWNGHASLLPRWRGAGPIQ 120
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
++++GD+ TG+ IM M++ LDTGPV ++V I N L LS + A +E++
Sbjct: 121 WSLLSGDSVTGVGIMAMEEGLDTGPVLANQRVSIGLLENANQLSNRLSSITAKLFLESIP 180
Query: 184 KL----EQNNLPLSPQIENGITYAEKISKGETRVNFCRSA--ENVHNHIRALSPFPGAWL 237
++ Q+E R+ + + + + G +
Sbjct: 181 RIAAAGPGVESERWKQLEVIKQEEIGGDPTYARMLSKKDHILDWNQSAMDLHRRVMGLYP 240
Query: 238 EMMIGNKHERIKLLESQLV--------------------EGEGKPGEVI----NPNFTIA 273
++R+K+ ++ + +GE +PG+++ + ++
Sbjct: 241 NAFSSWNNKRLKVQATEPLDEELKSKLSERVRPLLGRWQDGEHEPGKILACESDLGLVVS 300
Query: 274 CSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ I + Q G + +G +G
Sbjct: 301 TKTCPLLIRQGQLEGKSKALGEVLIQQLQATVGQNLG 337
>gi|58698329|ref|ZP_00373245.1| methionyl-tRNA formyltransferase [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58535153|gb|EAL59236.1| methionyl-tRNA formyltransferase [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 294
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 95/296 (32%), Positives = 149/296 (50%), Gaps = 12/296 (4%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MG+ FAV +L L+ S +V+VYT+ P+P+G RG K + S VH A+E ++ P
Sbjct: 1 MGSPGFAVNSLSLLLKSKSEVVAVYTKAPKPSG-RGQKPMKSPVHVIAEESNIEVCTPIS 59
Query: 68 -LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
E E+F +F DVAVV AYGL++P+ ILN K G N H SLLPRWRGAAPIQ I
Sbjct: 60 LKFSAEQEKFRNFKPDVAVVAAYGLILPREILNIPKYGCINIHPSLLPRWRGAAPIQHTI 119
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+AGD ETG++IM++D+ LD+GP+ I + L + + + K+
Sbjct: 120 LAGDQETGVSIMQLDEGLDSGPILKQ----EKFLIEKNDNYKTLHDKLSKLGSDLLLKVL 175
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
P +N + ++ + E + ++A P + I +++
Sbjct: 176 NEIEKQLPLKQNDNDACYADKVEDYKIYASDACEVAYRKVKAFYP------KAFIKIENK 229
Query: 247 RIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
RI++L++ + G+++N N I+ G + +Q G I DF+ G
Sbjct: 230 RIRILDADFEALASEQGKIVNDNMHISLKGGTLIPKVVQMEGRNPCSIEDFIRGLK 285
>gi|221126327|ref|XP_002165996.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
Length = 306
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 106/300 (35%), Positives = 153/300 (51%), Gaps = 28/300 (9%)
Query: 33 TQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSF---------NADV 83
+QP RPAG RG+K SAV + A E S+P P L + + ADV
Sbjct: 2 SQPDRPAG-RGMKLQASAVKQFALEHSIPVAQPRSLRLDGKFPEDAVAARQAIADAQADV 60
Query: 84 AVVVAYGLVIPQRILNAT---------KLGFYNGHASLLPRWRGAAPIQRAIMAGDNETG 134
VV AYGL++PQ +L+ + G N H SLLPRWRGAAPI RAI GD ETG
Sbjct: 61 MVVAAYGLILPQWVLDDMAAPQADGRVRFGCLNIHGSLLPRWRGAAPIHRAIELGDPETG 120
Query: 135 IAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSP 194
+ IM+MD LDTG + +PI+++ TA L +++ + A +V+ + Q L
Sbjct: 121 VTIMQMDAGLDTGDMLLKESLPIAADDTTATLHDKVAGMGARMIVQTLGLASQGALQPRR 180
Query: 195 QIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQ 254
Q + G+TYA KI K E + + A ++ IRA +PFPGA + E +K+ ++
Sbjct: 181 QPDEGVTYAHKIEKEEAPIRWSDDASSIVRRIRAFNPFPGATA----VMQGETLKVWGAK 236
Query: 255 LVEG--EGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ G + G ++ +A V I LQR GG+ + + DFL G P+ +G
Sbjct: 237 VGNGVASEEYGRIVAVAPGGIAVAAMNSIVIITELQRPGGKRMAVSDFLRGMPLEVGAQF 296
>gi|291619021|ref|YP_003521763.1| ArnA [Pantoea ananatis LMG 20103]
gi|291154051|gb|ADD78635.1| ArnA [Pantoea ananatis LMG 20103]
gi|327395359|dbj|BAK12781.1| bifunctional polymyxin resistance ArnA protein [Pantoea ananatis
AJ13355]
Length = 335
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 78/317 (24%), Positives = 145/317 (45%), Gaps = 16/317 (5%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M ++ V G E A L+AL+ + ++ +++T +G + +V + A+
Sbjct: 25 MKESGMKAVLFGYHEMACTGLKALMDAGFTVSALFTHADPASGAQ----FYGSVARLAER 80
Query: 58 FSLPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
++P + E + S AD +Y V+ + IL++ K G YN HA+LLP +
Sbjct: 81 HNIPVFITEDVNTAEWQARIASLEADYLFCFSYRQVLSEAILSSVKKGAYNVHAALLPAY 140
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RG A + I+ G+ +TG+ + +M K D GP+ + V I N L L A
Sbjct: 141 RGRAHLNWVIIKGETQTGVTLHRMIKRPDAGPILAQKAVEIHPQDNALALHTRLVATTAQ 200
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGA 235
+ +D L L +PQ E + + ++++ A ++HN +R P+PGA
Sbjct: 201 MLPTWLDALVAGELTETPQDERAASCFGSRKPEDGQIHWQAPARDIHNLVRALAFPWPGA 260
Query: 236 WLEMMIGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVL 292
+ +R + ++++++ +PGEV++ I C QG + I++ Q AGG +
Sbjct: 261 FT----LADSQRFTVWQTRVIDARKASQPGEVVSVTPLVIGCGQGQLEILQGQSAGGESV 316
Query: 293 DIGDFLLGCPVIIGCIV 309
+I+G +
Sbjct: 317 TGTTLAGQLGLIVGQHL 333
>gi|134035392|sp|Q32DT3|ARNA_SHIDS RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
Length = 660
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 66/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I IL G +N H SLL ++RG AP
Sbjct: 57 YAPDDVNHPLWVERIAQLSPDVIFSFYYRHLICDEILQLAPAGAFNLHGSLLTKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVTRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q + G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQASDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|213027379|ref|ZP_03341826.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 112
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 49/109 (44%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL++S H+IV V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLTSGHNIVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGH 109
P L +E + ++ DV VVVAYGL++P+ +L+ +LG N H
Sbjct: 63 VFQPVSLRPQENQHLVADLHADVMVVVAYGLILPKAVLDMPRLGCINVH 111
>gi|15828516|ref|NP_325876.1| methionyl-tRNA formyltransferase [Mycoplasma pulmonis UAB CTIP]
gi|21542053|sp|Q98RG4|FMT_MYCPU RecName: Full=Methionyl-tRNA formyltransferase
gi|14089458|emb|CAC13218.1| METHIONYL-TRNA FORMYLTRANSFERASE [Mycoplasma pulmonis]
Length = 289
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 73/294 (24%), Positives = 136/294 (46%), Gaps = 20/294 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++ GT EF+V + L+ IV++ TQP +P RG S V K AQ++ +
Sbjct: 1 MKLLLAGTPEFSVPIFEELIK-KFEIVAIITQPDKPK-NRGYSLEASPVKKLAQKYDIKV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ Y+Q D + AYG IP++ILN K+ N H SLLP++RGAAPI
Sbjct: 59 Y-DPEKISTIYDQIKDLEFDFFLTAAYGQYIPEKILNLPKIASLNVHGSLLPKYRGAAPI 117
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q A++ GD+ETGI+++ M K +D G + + K+ ++ N N L ++S + + +V +
Sbjct: 118 QHALLNGDDETGISLIYMTKKMDAGNILKIAKIKLNGNENADDLFLQMSKIASKNIVLWL 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCR---SAENVHNHIRALSPFPGAWLEM 239
+++ Q + Q E ++ + K+ K + + + +L+P
Sbjct: 178 EQIYQKDFSEIVQDEEKVSLSPKLLKEDALLEVDKLSVKDFINKVRAFSLNPGAY----- 232
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ +R+K+ + ++ F + + Q G + +
Sbjct: 233 -LIKDGKRVKIFRATTS--------LVKNAFVVEVQGQKIYCYEYQFEGKKRVK 277
>gi|320199846|gb|EFW74435.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli EC4100B]
Length = 660
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDDVNHPLWVERIAQLSPDVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 ALGLVQGSRL 304
>gi|146311730|ref|YP_001176804.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Enterobacter sp. 638]
gi|166988215|sp|A4WAM3|ARNA_ENT38 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|145318606|gb|ABP60753.1| NAD-dependent epimerase/dehydratase [Enterobacter sp. 638]
Length = 660
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 68/312 (21%), Positives = 136/312 (43%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + A + ALV++ + I ++YT P P+ +V + A E +P
Sbjct: 1 MKAVVFAYHDIGCAGINALVAAGYDITAIYTHPDAPSENH----FFGSVARTAAEHGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ S DV Y ++ ILN+ +G +N H SLLP +RG AP
Sbjct: 57 YAPNDVNHPLWIDRIKSAQPDVIFSFYYRNLLCDEILNSATVGAFNLHGSLLPHYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + KM D G + +V I+ L +L+ + + +
Sbjct: 117 LNWVLVKGETETGVTLHKMVSRADAGAIVAQHRVAIAPEETALTLHHKLTQASSDLLKDI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ + P Q + + + + + +++ +A+ + N +R P+PGA+ +
Sbjct: 177 LPVIKTGHFPEVEQDHSQASIFGRRTAQDGCIDWHATAQEISNLVRAVTDPWPGAFGYVG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + +++ +EG K G V++ + IA GA+ IM Q G +
Sbjct: 237 GS----KFIVWKARALEGLQAAKAGTVLSVSPLVIATGGGALEIMTGQTENGVYMQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G I+
Sbjct: 293 AQTLGLVAGAII 304
>gi|82777664|ref|YP_404013.1| putative transformylase [Shigella dysenteriae Sd197]
gi|309785044|ref|ZP_07679677.1| bifunctional polymyxin resistance protein arnA [Shigella
dysenteriae 1617]
gi|81241812|gb|ABB62522.1| putative transformylase [Shigella dysenteriae Sd197]
gi|308927414|gb|EFP72888.1| bifunctional polymyxin resistance protein arnA [Shigella
dysenteriae 1617]
Length = 544
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 66/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I IL G +N H SLL ++RG AP
Sbjct: 57 YAPDDVNHPLWVERIAQLSPDVIFSFYYRHLICDEILQLAPAGAFNLHGSLLTKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVTRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q + G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQASDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|328473548|gb|EGF44385.1| methionyl-tRNA formyltransferase [Listeria monocytogenes 220]
Length = 242
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 86/240 (35%), Positives = 134/240 (55%), Gaps = 4/240 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L L +S++ +V+V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPEFSVPVLTQL-ASTYDVVAVVTQPDRPVG-RKRVLTPPPVKKAALELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E E+ ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSKLGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + PQ +T+A IS+ + ++++ + + N IR LSP+P A+ +
Sbjct: 178 DTLPDFLAGKITAIPQDPEKVTFARNISREQEKIDWTKPGRTIFNQIRGLSPWPVAYTTL 237
>gi|167972905|ref|ZP_02555182.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|167973767|ref|ZP_02556044.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 11
str. ATCC 33695]
gi|167975764|ref|ZP_02558041.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|167987952|ref|ZP_02569623.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|168362883|ref|ZP_02696057.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|195867792|ref|ZP_03079792.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198273853|ref|ZP_03206387.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|209554203|ref|YP_002284899.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|225550384|ref|ZP_03771333.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 2
str. ATCC 27814]
gi|225551117|ref|ZP_03772063.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 8
str. ATCC 27618]
gi|229487573|sp|B5ZBV9|FMT_UREU1 RecName: Full=Methionyl-tRNA formyltransferase
gi|171903067|gb|EDT49356.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 13
str. ATCC 33698]
gi|184209275|gb|EDU06318.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 5
str. ATCC 27817]
gi|188019097|gb|EDU57137.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 7
str. ATCC 27819]
gi|188998082|gb|EDU67179.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 11
str. ATCC 33695]
gi|195659762|gb|EDX53142.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 12
str. ATCC 33696]
gi|195660489|gb|EDX53746.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 9
str. ATCC 33175]
gi|198249608|gb|EDY74390.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 4
str. ATCC 27816]
gi|209541704|gb|ACI59933.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 10
str. ATCC 33699]
gi|225378932|gb|EEH01297.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 8
str. ATCC 27618]
gi|225379538|gb|EEH01900.1| methionyl-tRNA formyltransferase [Ureaplasma urealyticum serovar 2
str. ATCC 27814]
Length = 305
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 84/305 (27%), Positives = 139/305 (45%), Gaps = 7/305 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M V+F GT E A L+ L + +++ V +QP R V S V + +
Sbjct: 1 MKYNVMFFGTPEIAKIVLETLFNMPEVNLIGVVSQPDS-HFDRKKNVVYSPVKQFCLDHD 59
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P K+ + E E S D+ + A+G I Q I++ K N HASLLP+ RG
Sbjct: 60 IKLFQPQKIKEIEEEI-RSLAPDIIITCAFGQFINQGIIDIPKYKIVNVHASLLPKLRGG 118
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
API AI+ GD +TGI +M K +D G + F R + I+ T L EL+ L A +
Sbjct: 119 APIHYAILNGDLQTGITLMHTIKKMDAGNILFQRSLAINEQTTTKILTLELANLGALMIK 178
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
E +L +++L Q EN +++A I K + ++F + A V+ + A+ P A +E
Sbjct: 179 EHFLELVKSDLVGIQQDENDVSFAYNIQKNQNIIDFNKPAFFVNRFVNAMYDKPIAIMEY 238
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ ++ ++ + KPG + ++ V ++ +Q + L
Sbjct: 239 --NDVLIKVHQIKITNQKSTQKPGTIAISKHQIFVSTQDFNVELLLIQLPNKKPLAPKAL 296
Query: 298 LLGCP 302
L G
Sbjct: 297 LNGKN 301
>gi|330877761|gb|EGH11910.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 663
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 74/313 (23%), Positives = 131/313 (41%), Gaps = 10/313 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V + LQAL+ + + I +V+T PA K+ +V + +
Sbjct: 1 MSPKAVVFAYHDIGCVGLQALLDAGYDIAAVFTHADDPAE----KTFFGSVAQLCARHDI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E+ D Y ++ + +L K G N H SLLPR+RG
Sbjct: 57 PVHAPEDPNHPLWVERIGKLAPDFIFSFYYRQLLGEPLLAYAKNGALNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G++ETG+ + +M K D GP+ ++V IS+ L +L + +
Sbjct: 117 APANWVLVNGESETGVTLHQMVKRADAGPIVAQQRVSISATDTALTLHGKLREAASSLLC 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
E + L Q L +PQ E+ TY + + + +++ A +++ IR P+PGA+
Sbjct: 177 ETLPLLAQGQLSGTPQDESKATYFGRRTPADGLIDWSLPAARLYDLIRAVTQPYPGAFCP 236
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQR-AGGRVLDIGD 296
+ + + PG VI+ + IAC + ++ I QR G L
Sbjct: 237 VGDNK--LIVWSARVEPRNNHQAPGTVISHDPLRIACGEDSLVISAGQRGDNGLYLSGAQ 294
Query: 297 FLLGCPVIIGCIV 309
++ G +
Sbjct: 295 LAREFGLVEGSQL 307
>gi|320324080|gb|EFW80162.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320327838|gb|EFW83845.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|320328674|gb|EFW84674.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330885493|gb|EGH19642.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 663
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 10/313 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V + LQAL+ + + I +V+T P K+ +V + +
Sbjct: 1 MSPKAVVFAYHDIGCVGLQALLGAGYEIAAVFTHADDPKE----KTFFGSVAQLCARHGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E+ D Y ++ +L K G N H SLLPR+RG
Sbjct: 57 PVHAPEDPNHPLWVERIDKLAPDFIFSFYYRQLLGDPLLACAKKGALNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G++ETG+ + +M K D GP+ ++V ISS L +L A +
Sbjct: 117 APANWVLVNGESETGVTLHQMVKRADAGPIVAQQRVSISSTDTALTLHGKLREAAADLLS 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
E + L L +PQ E + + + + +++ A ++N IR P+PGA+
Sbjct: 177 ETLPLLALGQLSGTPQDETRASCFGRRTPADGLIDWSLPATQLYNLIRAVTQPYPGAFC- 235
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQR-AGGRVLDIGD 296
+G + ++ PG VI+ + IAC +G++ I QR G L
Sbjct: 236 -AVGENKLIVWAASAEAGNNGEAPGTVISHDPLRIACGEGSLVINAGQRGDNGLYLSGAQ 294
Query: 297 FLLGCPVIIGCIV 309
++ G +
Sbjct: 295 LAREFGLVEGSQL 307
>gi|71736629|ref|YP_274991.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|83287937|sp|Q48HZ1|ARNA_PSE14 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|71557182|gb|AAZ36393.1| UDP-D-glucuronate dehydrogenase [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 663
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 10/313 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V + LQAL+ + + I +V+T P K+ +V + +
Sbjct: 1 MSPKAVVFAYHDIGCVGLQALLGAGYEIAAVFTHADDPKE----KTFFGSVAQLCARHGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E+ D Y ++ +L K G N H SLLPR+RG
Sbjct: 57 PVHAPEDPNHPLWVERIDKLAPDFIFSFYYRQLLGDPLLACAKKGALNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G++ETG+ + +M K D GP+ ++V ISS L +L A +
Sbjct: 117 APANWVLVNGESETGVTLHQMVKRADAGPIVAQQRVSISSTDTALTLHGKLREAAADLLS 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
E + L L +PQ E + + + + +++ A ++N IR P+PGA+
Sbjct: 177 ETLPLLALGQLSGTPQDETRASCFGRRTPADGLIDWSLPATQLYNLIRAVTQPYPGAFC- 235
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQR-AGGRVLDIGD 296
+G + ++ PG VI+ + IAC +G++ I QR G L
Sbjct: 236 -AVGENKLIVWAASAEAGNNGEAPGTVISHDPLRIACGEGSLVINAGQRGDNGLYLSGAQ 294
Query: 297 FLLGCPVIIGCIV 309
++ G +
Sbjct: 295 LAREFGLVEGSQL 307
>gi|290962837|ref|YP_003494019.1| formyltransferase [Streptomyces scabiei 87.22]
gi|260652363|emb|CBG75496.1| putative formyltransferase [Streptomyces scabiei 87.22]
Length = 315
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 70/310 (22%), Positives = 129/310 (41%), Gaps = 18/310 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ G + TL+AL+ S H +V V T P + K +V A++ +P
Sbjct: 1 MRIAMFGYQTWGHRTLRALLDSGHEVVLVVTHP--QSDHAYEKIWNDSVADLAEQHGVPV 58
Query: 63 -LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L +E + D+ V + +P I + G N H SLLP + G +P
Sbjct: 59 LLRNRPGDEELLRALKEADPDLIVANNWRTWLPPEIFDLPPHGTLNIHDSLLPAYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ E G+ +MD LD G V R VP+ L L + ++
Sbjct: 119 LIWALINGEPEVGVTAHRMDGELDMGDVLLQRSVPVGPKDTATDLFHRTVDLIGPLVTDS 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ ++ +PQ + ++ K S ++R+++ AE++ +RA +
Sbjct: 179 LELIDSGRAVWTPQDRSRSSFFHKRSLEDSRIDWTWPAEDLERFVRAQ---SDPYPNAFT 235
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAGG 289
++ ERI+++ + + EG G PG + I GA + + R++ G
Sbjct: 236 HHRGERIRIVAASVSEGRYGGTPGRIFIREGDGVVIVAGAGARSGRLPGLVVERVRTEDG 295
Query: 290 RVLDIGDFLL 299
L D+
Sbjct: 296 TELAATDYFR 305
>gi|301024033|ref|ZP_07187749.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 69-1]
gi|300396765|gb|EFJ80303.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 69-1]
Length = 660
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPDVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGRVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|307133266|ref|YP_003885282.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Dickeya dadantii 3937]
gi|306530795|gb|ADN00726.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Dickeya dadantii 3937]
Length = 663
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 71/312 (22%), Positives = 139/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V +F L+ALV++ +++ +V+T PA + +V + A E +P
Sbjct: 1 MKAVVFAYHDFGCVGLRALVAAGYTVEAVFTHADNPAENQ----FFGSVARTAAELGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ + + DV Y ++ IL + G YN H SLLPR+RG AP
Sbjct: 57 FAPEDVNHPLWVERIAAMSPDVIFSFYYRHLLSDAILQSAVHGAYNLHGSLLPRYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG+ + +M D G + ++V I + L ++L + + +
Sbjct: 117 LNWALVNGETETGVTLHRMVARADAGNIVAQQRVAIDESDTALSLHRKLRDVAEQLLKDT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + PQ E+ TY + + + R+ + + A ++N +R P+PGA+ +
Sbjct: 177 LPAIAAGKANDIPQDESQATYVGRRTPEDGRIEWQKPARTLYNLVRAVTEPWPGAFSFVG 236
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + ++++ KPG V++ + +AC A+ I+ Q G L
Sbjct: 237 TT----KFIIWQAKVRTDFAAAKPGTVLSTSPLVVACGSDALEIVTGQGDNGIYLQGAQL 292
Query: 298 LLGCPVIIGCIV 309
++ G I+
Sbjct: 293 AQSLGLVTGAIL 304
>gi|308271088|emb|CBX27698.1| Bifunctional polymyxin resistance protein arnA [uncultured
Desulfobacterium sp.]
Length = 663
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 69/309 (22%), Positives = 123/309 (39%), Gaps = 7/309 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + A ++AL+ + I +V+T P G +V + A +P
Sbjct: 1 MKAVVLAYHNIGCAGIEALLKNGFDIKAVFTHEDDP----GENLWFKSVAELAAANDIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ D+ Y ++ + IL+ G N H SLLPR+RG P
Sbjct: 57 YAPDDINHLLWVEKIREMEPDILFSFYYRNIVDKNILDIMPSGALNLHGSLLPRYRGRCP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + M D G + ++V I L ++L + A M E
Sbjct: 117 VNWVLVNGEKETGVTLHYMTPQPDDGDIVGQKRVGIDDEDTALSLHKKLEMATASLMDEL 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + PQ +Y + +N+ ++A +V N +RA++ +
Sbjct: 177 LPAIIEKRSERIPQQHLLASYFGGRKPEDGEINWNQNATDVRNLVRAVTRPYPGAFSYIG 236
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
K ++ +Q E E PG V++ N IAC GAV++M Q G +
Sbjct: 237 NRKTFFWQVSLAQTTE-EASPGTVLSANPLKIACGNGAVQVMFGQPEDGIYMSGRQLAEE 295
Query: 301 CPVIIGCIV 309
+ G
Sbjct: 296 LNLAKGMKF 304
>gi|255081700|ref|XP_002508072.1| predicted protein [Micromonas sp. RCC299]
gi|226523348|gb|ACO69330.1| predicted protein [Micromonas sp. RCC299]
Length = 344
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 78/336 (23%), Positives = 137/336 (40%), Gaps = 36/336 (10%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSA----V 51
++VF+GT E A + L+A++ ++ + +V +QP RP G RG V
Sbjct: 6 KKKLVFLGTPEVAASALEAILDAAEAPNAAFEVHAVVSQPGRPRG-RGRSKSGPPPPSPV 64
Query: 52 HKKAQEFSLPALVPTKLGQEEYEQF----LSFNADVAVVVAYGLVIPQRILNATKLGFYN 107
+ A +P + + F D+ V AYG +PQ+ L+ +LG N
Sbjct: 65 AEAAMRRGIPEDMVLCPVKANEPDFLQRLRDMEPDLMVTAAYGNFLPQKFLDIPRLGTLN 124
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQ 167
H SLLP++RGAAP+QR + GD TG+++ +D GPV + ++ + L
Sbjct: 125 IHPSLLPQFRGAAPVQRCLERGDAVTGVSVAYTVLKMDAGPVLRRVEHELNGDEKHDELL 184
Query: 168 QELSVLCAHAMVEAMDKLEQ---NNLPLSPQ----IENGITYAEKISKGETRVNFCRSAE 220
EL A A++EA+ ++ + +PQ +
Sbjct: 185 PELFATGAKALIEALPRVWDGTESFDTATPQAEYGDACEAPKTSPEEARMDFMGQNARTL 244
Query: 221 NVHNHIRALSPFPGAWLEMMIGNKHE----RIKLLESQLV-------EGEGKPG--EVIN 267
+ A P A E+ E +K++ +++V E + G E+
Sbjct: 245 HNKVRGFAGWPGTKAKFEVRKDGGDEGTVVEVKIITTKVVTDSEAGKEAKAANGAVELTK 304
Query: 268 PNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLLGCP 302
+ + C G + ++ LQ G + + GD+ G
Sbjct: 305 NSMRVPCGGGDWLEVLELQPPGKKAMKAGDYANGMK 340
>gi|66361563|pdb|2BLN|A Chain A, N-Terminal Formyltransferase Domain Of Arna In Complex
With N-5-Formyltetrahydrofolate And Ump
gi|66361564|pdb|2BLN|B Chain B, N-Terminal Formyltransferase Domain Of Arna In Complex
With N-5-Formyltetrahydrofolate And Ump
Length = 305
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|315615520|gb|EFU96152.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
3431]
Length = 660
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|237749248|ref|ZP_04579728.1| methionyl-tRNA formyltransferase [Oxalobacter formigenes OXCC13]
gi|229380610|gb|EEO30701.1| methionyl-tRNA formyltransferase [Oxalobacter formigenes OXCC13]
Length = 310
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 75/315 (23%), Positives = 129/315 (40%), Gaps = 13/315 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+V +G F A +A S H IV V+ P + + + A + +P
Sbjct: 1 MRIVIVGQRRFGKAVFEAFQSRGHEIVGVFVAPDKKG------AEPDTLKLYAMDKGIPL 54
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ LG E ++ +D+AV+ +P+ K G H SLLP++RG +
Sbjct: 55 FQFSDLGSPEALSAIADLKSDMAVMAYVLQFVPEEFTKIPKYGTIQFHPSLLPKYRGPSA 114
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCAHAMVE 180
I AI+ G+ ETGI + + +D GP+ ++V I + L L A++E
Sbjct: 115 INWAIVCGEKETGITVFRPTDGMDEGPILLQKRVSIDPDETLGALYHRRLFPLGIDALLE 174
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
D++ + Q +Y + R+N+ V+N IR +P PGAW +
Sbjct: 175 TADRIASGDYEEKEQDNTVASYEGWFRTIDARINWNNHVNQVYNLIRGCNPKPGAWSTVN 234
Query: 241 IGNKHE--RIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
K L + G+PG ++ + + G +RI ++Q G +
Sbjct: 235 GLKFIVLDARKHLHAAADSVRGRPGSIVEVDEKSVFVGGQGGEIRIFQIQLESGEKIPAP 294
Query: 296 DFLLGCPVIIGCIVG 310
DF + G +G
Sbjct: 295 DFARQNGLQAGSPLG 309
>gi|330965148|gb|EGH65408.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 663
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 75/313 (23%), Positives = 132/313 (42%), Gaps = 10/313 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V + LQAL+ + + I +V+T PA K+ +V + +
Sbjct: 1 MSPKAVVFAYHDIGCVGLQALLDAGYDIAAVFTHADDPAE----KTFFGSVAQLCARHDI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E+ D Y ++ + +L K G N H SLLP +RG
Sbjct: 57 PVHAPEDPNHPLWVERIGKLTPDFIFSFYYRQLLGEPLLTCAKKGALNLHGSLLPHYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G++ETG+ + +M K D GP+ ++V IS+ L +L + +
Sbjct: 117 APANWVLVNGESETGVTLHQMVKRADAGPIVAQQRVSISATDTALTLHGKLREAASSLLC 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
E + L Q L +PQ E+ TY + + + +++ A +++ IR P+PGA+
Sbjct: 177 ETLPLLAQGQLSGTPQDESKATYFGRRTPADGLIDWSLPAARLYDLIRAVTQPYPGAFCP 236
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQR-AGGRVLDIGD 296
+ L+E + PG VI+ + IAC + ++ I QR G L
Sbjct: 237 VGDNKLIVWSALVEPR--NYHQAPGTVISHDPLRIACGEDSLVISAGQRGDNGLYLSGAQ 294
Query: 297 FLLGCPVIIGCIV 309
++ G +
Sbjct: 295 LAREFGLVEGSQL 307
>gi|157159038|ref|YP_001463602.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli E24377A]
gi|193062414|ref|ZP_03043509.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli E22]
gi|194427214|ref|ZP_03059765.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli B171]
gi|209919705|ref|YP_002293789.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli SE11]
gi|218554814|ref|YP_002387727.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli IAI1]
gi|218695857|ref|YP_002403524.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 55989]
gi|256017586|ref|ZP_05431451.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella sp. D9]
gi|260844847|ref|YP_003222625.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli O103:H2 str. 12009]
gi|260856301|ref|YP_003230192.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli O26:H11 str. 11368]
gi|293446595|ref|ZP_06663017.1| bifunctional polymyxin resistance protein aRNA [Escherichia coli
B088]
gi|300822127|ref|ZP_07102269.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 119-7]
gi|331668956|ref|ZP_08369804.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TA271]
gi|331678204|ref|ZP_08378879.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli H591]
gi|332278595|ref|ZP_08391008.1| bifunctional polymyxin resistance protein aRNA [Shigella sp. D9]
gi|166988213|sp|A7ZP73|ARNA_ECO24 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|226723711|sp|B7M5T7|ARNA_ECO8A RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|226723714|sp|B6I7J8|ARNA_ECOSE RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|254806285|sp|B7LAS0|ARNA_ECO55 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|157081068|gb|ABV20776.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli E24377A]
gi|192932080|gb|EDV84679.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli E22]
gi|194414835|gb|EDX31106.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli B171]
gi|209912964|dbj|BAG78038.1| putative formyltransferase [Escherichia coli SE11]
gi|218352589|emb|CAU98370.1| fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase
[Escherichia coli 55989]
gi|218361582|emb|CAQ99174.1| fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase
[Escherichia coli IAI1]
gi|257754950|dbj|BAI26452.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli O26:H11 str. 11368]
gi|257759994|dbj|BAI31491.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli O103:H2 str. 12009]
gi|291323425|gb|EFE62853.1| bifunctional polymyxin resistance protein aRNA [Escherichia coli
B088]
gi|300525257|gb|EFK46326.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 119-7]
gi|323156405|gb|EFZ42560.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
EPECa14]
gi|323161664|gb|EFZ47548.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
E128010]
gi|323184128|gb|EFZ69505.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
1357]
gi|324020925|gb|EGB90144.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 117-3]
gi|331064150|gb|EGI36061.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TA271]
gi|331074664|gb|EGI45984.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli H591]
gi|332100947|gb|EGJ04293.1| bifunctional polymyxin resistance protein aRNA [Shigella sp. D9]
Length = 660
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDDVNHPLWVERIAQLSPDVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|191166526|ref|ZP_03028356.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli B7A]
gi|309793133|ref|ZP_07687561.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 145-7]
gi|190903486|gb|EDV63205.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli B7A]
gi|308123419|gb|EFO60681.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 145-7]
gi|323944769|gb|EGB40835.1| NAD dependent epimerase/dehydratase [Escherichia coli H120]
Length = 660
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 66/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ + + ++ + DV Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YATDDVNHPLWVERIAQLSPDVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|16130190|ref|NP_416758.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli str. K-12 substr. MG1655]
gi|89109072|ref|AP_002852.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA C-4'-decarboxylase
[Escherichia coli str. K-12 substr. W3110]
gi|170019431|ref|YP_001724385.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli ATCC 8739]
gi|170081873|ref|YP_001731193.1| fused UDP-L-Ara4N formyltransferase; UDP-GlcA C-4'-decarboxylase
[Escherichia coli str. K-12 substr. DH10B]
gi|188492513|ref|ZP_02999783.1| bifunctional polymyxin resistance arnA protein [Escherichia coli
53638]
gi|194436241|ref|ZP_03068343.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 101-1]
gi|238901429|ref|YP_002927225.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli BW2952]
gi|253772821|ref|YP_003035652.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254162266|ref|YP_003045374.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli B str. REL606]
gi|256022062|ref|ZP_05435927.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia sp. 4_1_40B]
gi|300948958|ref|ZP_07163018.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 116-1]
gi|300958945|ref|ZP_07171048.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 175-1]
gi|301026887|ref|ZP_07190286.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 196-1]
gi|301647652|ref|ZP_07247446.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 146-1]
gi|312973488|ref|ZP_07787660.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
1827-70]
gi|6176575|sp|P77398|ARNA_ECOLI RecName: Full=Bifunctional polymyxin resistance protein ArnA;
AltName: Full=Polymyxin resistance protein PmrI;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|189046231|sp|B1IXT2|ARNA_ECOLC RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|226723712|sp|B1X8W8|ARNA_ECODH RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|259563491|sp|C4ZU97|ARNA_ECOBW RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|71042200|pdb|1Z7E|A Chain A, Crystal Structure Of Full Length Arna
gi|71042201|pdb|1Z7E|B Chain B, Crystal Structure Of Full Length Arna
gi|71042202|pdb|1Z7E|C Chain C, Crystal Structure Of Full Length Arna
gi|71042203|pdb|1Z7E|D Chain D, Crystal Structure Of Full Length Arna
gi|71042204|pdb|1Z7E|E Chain E, Crystal Structure Of Full Length Arna
gi|71042205|pdb|1Z7E|F Chain F, Crystal Structure Of Full Length Arna
gi|1788589|gb|AAC75315.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli str. K-12 substr. MG1655]
gi|1799607|dbj|BAA16078.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA C-4'-decarboxylase
[Escherichia coli str. K12 substr. W3110]
gi|16555376|gb|AAL23678.1| UDP-D-glucuronate dehydrogenase [Escherichia coli]
gi|169754359|gb|ACA77058.1| NAD-dependent epimerase/dehydratase [Escherichia coli ATCC 8739]
gi|169889708|gb|ACB03415.1| fused UDP-L-Ara4N formyltransferase; UDP-GlcA C-4'-decarboxylase
[Escherichia coli str. K-12 substr. DH10B]
gi|188487712|gb|EDU62815.1| bifunctional polymyxin resistance arnA protein [Escherichia coli
53638]
gi|194424969|gb|EDX40954.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 101-1]
gi|238861262|gb|ACR63260.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli BW2952]
gi|242377889|emb|CAQ32657.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase, subunit of UDP-GlcA
C-4''-decarboxylase / UDP-L-Ara4N formyltransferase
[Escherichia coli BL21(DE3)]
gi|253323865|gb|ACT28467.1| NAD-dependent epimerase/dehydratase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974167|gb|ACT39838.1| hypothetical protein ECB_02181 [Escherichia coli B str. REL606]
gi|253978334|gb|ACT44004.1| hypothetical protein ECD_02181 [Escherichia coli BL21(DE3)]
gi|260448653|gb|ACX39075.1| NAD-dependent epimerase/dehydratase [Escherichia coli DH1]
gi|299879547|gb|EFI87758.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 196-1]
gi|300314448|gb|EFJ64232.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 175-1]
gi|300451572|gb|EFK15192.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 116-1]
gi|301074182|gb|EFK88988.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 146-1]
gi|309702565|emb|CBJ01893.1| bifunctional polymyxin resistance protein [includes:
UDP-4-amino-4-deoxy-l-arabinose formyltransferase;
UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating] [Escherichia coli ETEC H10407]
gi|310332083|gb|EFP99318.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
1827-70]
gi|315136888|dbj|BAJ44047.1| bifunctional UDP-glucuronic
aciddecarboxylase/UDP-4-amino-4-deoxy-L-
arabinoseformyltransferase [Escherichia coli DH1]
gi|323936653|gb|EGB32939.1| NAD dependent epimerase/dehydratase [Escherichia coli E1520]
gi|323961496|gb|EGB57105.1| NAD dependent epimerase/dehydratase [Escherichia coli H489]
gi|323973040|gb|EGB68234.1| NAD dependent epimerase/dehydratase [Escherichia coli TA007]
Length = 660
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|307138918|ref|ZP_07498274.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli H736]
gi|331642892|ref|ZP_08344027.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli H736]
gi|331039690|gb|EGI11910.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli H736]
Length = 660
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|15219681|ref|NP_176825.1| pde194 (pigment defective 194); catalytic/ formyltetrahydrofolate
deformylase/ hydroxymethyl-, formyl- and related
transferase [Arabidopsis thaliana]
gi|12322271|gb|AAG51166.1|AC074025_16 formyl transferase, putative [Arabidopsis thaliana]
gi|332196399|gb|AEE34520.1| methionyl-tRNA formyltransferase [Arabidopsis thaliana]
Length = 355
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 77/330 (23%), Positives = 145/330 (43%), Gaps = 29/330 (8%)
Query: 5 VVFMGTSEFAVATLQALVS------SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
++F+G+ + +V+ L+AL + SS + + TQPP RG K + S V + A +
Sbjct: 27 LIFLGSPQVSVSVLEALFNASNAPNSSFEVAGIVTQPPSRR-DRGKKVLPSPVAQYALDK 85
Query: 59 SLP----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
LP + ++ + AYG ++P + L G N H SLLP
Sbjct: 86 GLPSDLIFSPEKAGDEAFLSALRELQPELCITAAYGNILPTKFLKIPVHGTVNIHPSLLP 145
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
+RGAAP+QRA+ G ETG+++ + LD GPV ++ + I L L
Sbjct: 146 LYRGAAPVQRALQDGVPETGVSLAFTVRKLDAGPVIASKRFQVDDLIKAPELLSFLFSEG 205
Query: 175 AHAMVEAMDKLEQNNLPLS--PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
++ ++ + + + PQ ++ T A KI+ E ++F + A +HN +RA + +
Sbjct: 206 SNLLIRELPSIFDGSAKSKAAPQDDSKATLAPKIAPDEAWLSFDQEAFVLHNKVRAFAGW 265
Query: 233 PGAWLEMMI------GNKHERIKLLESQLV------EGEGKPGEVINPNFTIACSQG-AV 279
PG ++++ +K++ +++ + E + C G A+
Sbjct: 266 PGTRAKVVVLDEKSGQQNVLELKIMSTRVCKDLEIQDSEQDYVTFKKGSLIFPCRGGTAL 325
Query: 280 RIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
++ +Q G + ++ F G G +
Sbjct: 326 EVLEVQLPGKKAINAAAFWNGLR---GQKL 352
>gi|332298813|ref|YP_004440735.1| Methionyl-tRNA formyltransferase [Treponema brennaborense DSM
12168]
gi|332181916|gb|AEE17604.1| Methionyl-tRNA formyltransferase [Treponema brennaborense DSM
12168]
Length = 337
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 82/334 (24%), Positives = 146/334 (43%), Gaps = 27/334 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVS------SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ 56
+ +++ G+ + + L+ L++ + I V T PP G R V + V ++A+
Sbjct: 2 INILYAGSPDVSAIPLERLIAESVTPGAQFRIAGVLTNPPAAQG-RSKALVPTPVAQEAE 60
Query: 57 E----FSL--PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
+ + P P KLG + EQ + + D+ V AYG + + + G N H
Sbjct: 61 RAESRYGITVPVFTPEKLGAQAREQIAAVHPDLLVCFAYGKIFGPKFMALFPYGGINLHP 120
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL 170
SLLP +RG AP+ AI+ +ETGI + K+ +D+G + R +P+S L +
Sbjct: 121 SLLPAYRGCAPVPAAILDCKSETGITVQKLAAQMDSGNILLQRIIPLSGTETAGVLLESA 180
Query: 171 SVLCAHAMVEAMDKLEQNN--LPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRA 228
+ A ++E + +N PQ + TY+ + K + +++ +A + IRA
Sbjct: 181 ARAGAEMLLEIITGAAKNRAIPEGIPQNDADATYSAMLKKEDGLIDWHDTARAIDAKIRA 240
Query: 229 LSPFPGAWLEMM-IGNKHERIKLLESQL-------VEGEGKPGEVI----NPNFTIACSQ 276
+P+PGA+ + + K R + +L ++ PG V+ I
Sbjct: 241 FNPWPGAFTRVRGVQLKIHRAAVYGGELPQQAREALDRGAIPGTVLGVDKKEGILIQTGN 300
Query: 277 GAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
G + LQ + +D DF+ G G I G
Sbjct: 301 GILAAATLQWQTKKAVDWKDFINGSGDFPGMICG 334
>gi|85706373|ref|ZP_01037467.1| methionyl-tRNA formyltransferase [Roseovarius sp. 217]
gi|85669146|gb|EAQ24013.1| methionyl-tRNA formyltransferase [Roseovarius sp. 217]
Length = 300
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 70/309 (22%), Positives = 119/309 (38%), Gaps = 16/309 (5%)
Query: 8 MGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MG F L L+ + +V+VY +P R + V + A E LP P
Sbjct: 1 MGQQAFGKDVLAKLLDTGTDEVVAVYCEPDRDG------KPVDPVKELALEKGLPVHQPA 54
Query: 67 KLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
+ L+ AD+ V+ + +P+ + G H SLLP RG + +
Sbjct: 55 NFDDPASLEVLAGHQADLMVMAFVNVFVPEAARDTPTHGSICFHPSLLPLHRGPSAVNWP 114
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV-EAMDK 184
I+ G ++G + LD G I + L + A V D
Sbjct: 115 IIMGSTKSGYSWFYPSDGLDEGDSLLQWDCEIGPDDTVIDLYFKKIYPSAVESVLTVCDL 174
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
+ N P E+ TY + ++ +R+ + R + V++ IR +P PGAW +
Sbjct: 175 YRKGNPPRIVPDEDEATYERRCTRTHSRIEWHRPVKQVYDLIRGTNPAPGAWTTLNGAEV 234
Query: 245 HERIKLLESQLVEGEGKPG---EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+ + LV G+G G EV + + C G + I R++ GG + ++
Sbjct: 235 D----VYDCALVPGDGISGRVREVSDAGVAVQCVGGRILIKRVRPKGGAKVPASEWAASV 290
Query: 302 PVIIGCIVG 310
+ G +G
Sbjct: 291 DLAPGATLG 299
>gi|300818146|ref|ZP_07098358.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 107-1]
gi|300529290|gb|EFK50352.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 107-1]
Length = 660
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 68/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDDVNHPLWVERIAQLSPDVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISIAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|33519685|ref|NP_878517.1| methionyl-tRNA formyltransferase [Candidatus Blochmannia
floridanus]
gi|39931238|sp|Q7VQC1|FMT_BLOFL RecName: Full=Methionyl-tRNA formyltransferase
gi|33517348|emb|CAD83733.1| methionyl-tRNA formyltransferase [Candidatus Blochmannia
floridanus]
Length = 323
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 90/312 (28%), Positives = 164/312 (52%), Gaps = 20/312 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+ F GTS+FA L L+ S H IV+++TQ + + KS + ++H +Q ++
Sbjct: 8 LRIAFFGTSDFAAYHLFVLIHCSIHKIVAIFTQE---SIKIKQKSSILSIHTISQINNIL 64
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L Q + + N D+ +VV+YG+++ Q IL+ KLG N H SLLPRWRG A
Sbjct: 65 LFQSYFLSQSQINHIIKNLNIDIIIVVSYGVILSQEILHIPKLGCINIHGSLLPRWRGPA 124
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ GD TGI+I++M+ ++DTG + IS + L ++L+ + + A+++
Sbjct: 125 PIQRALEHGDTMTGISIIQMNSNIDTGDILHSTPCKISPKDTSYTLSKKLACIGSIALLK 184
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++K+ PQ + ITYA K++K E +N+ +SA + IRA +P+P ++ ++
Sbjct: 185 TIEKIILGTCKNIPQDTSNITYAYKLNKKEAHINWNKSAIEIERRIRAFNPWPVSYFKIK 244
Query: 241 IGNKHERIKLLESQLVEG--------EGKPGEVIN---PNFTIACSQGAVRIMRLQRAGG 289
++ +++ + + +PG ++ + G + + LQ +G
Sbjct: 245 NQYI----RVWNAEINKNSINTDQYNDFQPGTILKTHPNGIYVITGSGIIILTVLQISGK 300
Query: 290 RVLDIGDFLLGC 301
+ + + D +
Sbjct: 301 KKIHVKDLMNAY 312
>gi|332344038|gb|AEE57372.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
UMNK88]
Length = 660
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKYGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|304398783|ref|ZP_07380654.1| NAD-dependent epimerase/dehydratase [Pantoea sp. aB]
gi|304353730|gb|EFM18106.1| NAD-dependent epimerase/dehydratase [Pantoea sp. aB]
Length = 659
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 70/312 (22%), Positives = 140/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + + AL+S+ + I +++T +V + A E +P
Sbjct: 1 MKTVVFAYHDLGCVGINALLSAGYEITAIFTHNDVATENH----FFGSVARLAAEHGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ + ++ Y ++ IL + G +N H SLLP++RG AP
Sbjct: 57 YAPDEANHPIWLDRIRTMAPEMIFSFYYRHLLSDEILQCAEKGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG+ + +M K D G + +KV I N L ++L+ + +
Sbjct: 117 LNWALVNGETETGVTLHRMVKRADAGNILAQQKVAIEDADNALTLHRKLTQAAEQLLNDV 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ +L + +PQ E+ T + + + R+++ + AE +HN +R P+PGA+
Sbjct: 177 LPRLRTGEVSETPQDESQATCVGRRTAEDGRIDWNQPAEKIHNLVRAVTDPWPGAFAFAG 236
Query: 241 IGNKHERIKLLESQL--VEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + +S++ + KPG VI+ F IAC +GA+ I+ Q G ++
Sbjct: 237 S----VKFIVWKSRVHTHPHQAKPGTVISKQPFLIACGEGALEILTGQSEHGVYMNGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G ++
Sbjct: 293 AQSLGMVPGALL 304
>gi|29824361|gb|AAP04141.1| putative formyl transferase [Arabidopsis thaliana]
gi|110738871|dbj|BAF01358.1| hypothetical protein [Arabidopsis thaliana]
Length = 355
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 77/330 (23%), Positives = 145/330 (43%), Gaps = 29/330 (8%)
Query: 5 VVFMGTSEFAVATLQALVS------SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
++F+G+ + +V+ L+AL + SS + + TQPP RG K + S V + A +
Sbjct: 27 LIFLGSPQVSVSVLEALFNASNAPNSSFEVAGIVTQPPSRR-DRGKKVLPSPVAQYALDK 85
Query: 59 SLP----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
LP + ++ + AYG ++P + L G N H SLLP
Sbjct: 86 GLPSDLIFSPEKAGDEAFLSALRELQPELCITAAYGNILPTKFLKIPVHGAVNIHPSLLP 145
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
+RGAAP+QRA+ G ETG+++ + LD GPV ++ + I L L
Sbjct: 146 LYRGAAPVQRALQDGVPETGVSLAFTVRKLDAGPVIASKRFQVDDLIKAPELLSFLFSEG 205
Query: 175 AHAMVEAMDKLEQNNLPLS--PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
++ ++ + + + PQ ++ T A KI+ E ++F + A +HN +RA + +
Sbjct: 206 SNLLIRELPSIFDGSAKSKAAPQDDSKATLAPKIAPDEAWLSFDQEAFVLHNKVRAFAGW 265
Query: 233 PGAWLEMMI------GNKHERIKLLESQLV------EGEGKPGEVINPNFTIACSQG-AV 279
PG ++++ +K++ +++ + E + C G A+
Sbjct: 266 PGTRAKVVVLDEKSGQQNVLELKIMSTRVCKDLEIQDSEQDYVTFKKGSLIFPCRGGTAL 325
Query: 280 RIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
++ +Q G + ++ F G G +
Sbjct: 326 EVLEVQLPGKKAINAAAFWNGLR---GQKL 352
>gi|330985431|gb|EGH83534.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 663
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 10/313 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V + LQAL+ + + I +V+T P K+ +V + +
Sbjct: 1 MSPKAVVFAYHDIGCVGLQALLGAGYEIAAVFTHADDPKE----KTFFGSVAQLCARHGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E+ D Y ++ +L K G N H SLLPR+RG
Sbjct: 57 PVHAPEDPNHPLWVERIGKLAPDFIFSFYYRQLLGDPLLACAKKGALNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G++ETG+ + +M K D GP+ ++V ISS L +L A +
Sbjct: 117 APANWVLVNGESETGVTLHQMVKRADAGPIVAQQRVSISSTDTALTLHGKLREAAADLLS 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
E + L L +PQ E + + + + +++ A ++N IR P+PGA+
Sbjct: 177 ETLPLLALGQLSGTPQDETLASCFGRRTPADGLIDWSLPAIQLYNLIRAVTQPYPGAFC- 235
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQR-AGGRVLDIGD 296
+G + ++ PG VI+ + IAC +G++ I QR G L
Sbjct: 236 -AVGENKLIVWAASAEAGNNGEAPGTVISHDPLRIACGEGSLVINAGQRGDNGLYLSGAQ 294
Query: 297 FLLGCPVIIGCIV 309
++ G +
Sbjct: 295 LAREFGLVEGSQL 307
>gi|257484198|ref|ZP_05638239.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331008272|gb|EGH88329.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 663
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 10/313 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V + LQAL+ + + I +V+T P K+ +V + +
Sbjct: 1 MSPKAVVFAYHDIGCVGLQALLGAGYEIAAVFTHADDPKE----KTFFGSVAQLCARHGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E+ D Y ++ +L K G N H SLLPR+RG
Sbjct: 57 PVHAPEDPNHPLWVERIGKLAPDFIFSFYYRQLLGDPLLACAKKGALNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G++ETG+ + +M K D GP+ ++V ISS L +L A +
Sbjct: 117 APANWVLVNGESETGVTLHQMVKRADAGPIVAQQRVSISSTDTALTLHGKLREAAADLLS 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
E + L L +PQ E + + + + +++ A ++N IR P+PGA+
Sbjct: 177 ETLPLLALGQLSGTPQDETLASCFGRRTPADGLIDWSLPAIQLYNLIRAVTQPYPGAFC- 235
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQR-AGGRVLDIGD 296
+G + ++ PG VI+ + IAC +G++ I QR G L
Sbjct: 236 -AVGENKLIVWAASAEAGNNGEAPGTVISHDPLRIACGEGSLVINAGQRGDNGLYLSGAQ 294
Query: 297 FLLGCPVIIGCIV 309
++ G +
Sbjct: 295 LAREFGLVEGSQL 307
>gi|255574306|ref|XP_002528067.1| methionyl-tRNA formyltransferase, putative [Ricinus communis]
gi|223532528|gb|EEF34317.1| methionyl-tRNA formyltransferase, putative [Ricinus communis]
Length = 362
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 74/330 (22%), Positives = 140/330 (42%), Gaps = 29/330 (8%)
Query: 5 VVFMGTSEFAVATLQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
+VF+G+ + + L AL ++S + ++ TQPP G RG K + S + A +
Sbjct: 34 LVFLGSPQVSTTVLDALFNASSSPNSIFEVAAIVTQPPARKG-RGRKLMPSPAAQYALDR 92
Query: 59 SLP----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
P ++ + AYG ++P + LN +G N H SLLP
Sbjct: 93 GFPPDLIFTPERAGEDSFLCSLKELQPELCITAAYGNILPTKFLNIPSMGIVNIHPSLLP 152
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
+RGAAP+QRA+ G ETG+++ + LD GPV ++ + I L L
Sbjct: 153 LYRGAAPVQRALQDGVKETGVSLAFTVRALDAGPVIAHERLDVDDQIKAPDLLALLFSEG 212
Query: 175 AHAMVEAMDKLEQNNLPLSP--QIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ ++ + + + Q ++ T A KI+ E+ ++F A +HN +RA + +
Sbjct: 213 SRLLIHELPSIFDGSAREKALLQDDSKATLAPKITPEESWLSFDEEASVLHNKVRAFAGW 272
Query: 233 PGAWLEMMIGN------KHERIKLLESQLVEGEGKPG------EVINPNFTIACSQG-AV 279
PG ++ + + +K++ +++ G + + C + A+
Sbjct: 273 PGTRAKVALVDGKDGNEDIIELKVITTRVCHHGIPQGNEVDDITFLKGSLVFPCGKSTAL 332
Query: 280 RIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
++ +Q G + + F G G +
Sbjct: 333 EVLEVQLPGKKAVSAAAFWNGLR---GQKL 359
>gi|288550485|ref|ZP_05970615.2| methionyl-tRNA formyltransferase [Enterobacter cancerogenus ATCC
35316]
gi|288314936|gb|EFC53874.1| methionyl-tRNA formyltransferase [Enterobacter cancerogenus ATCC
35316]
Length = 268
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 92/270 (34%), Positives = 148/270 (54%), Gaps = 12/270 (4%)
Query: 48 LSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFY 106
V A+E LP P L EE +Q ++ DV VVVAYGL++P+ +L+ +LG
Sbjct: 2 PGPVKALAEEHGLPVFQPASLRPEENQQLVADLNADVMVVVAYGLILPKAVLDMPRLGCI 61
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H SLLPRWRGAAPIQR++ AGD ETG+ IMKMD LDTG + + PI+ +A L
Sbjct: 62 NVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMKMDVGLDTGDMLYKLSCPITPEDTSATL 121
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L+ L +++ +++L + Q E +TYAEK+SK E +++ A + I
Sbjct: 122 YDKLAELGPQGLIKTLEQLAEGTAKPEVQDEALVTYAEKLSKDEALLDWALPAAQLERCI 181
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGAVRI 281
RA +P+P +W+ + + +K+ ++ ++E + PG ++ +A ++G + +
Sbjct: 182 RAFNPWPMSWMVIDD----QPVKVWKASVIESHVQAAPGTIVEANKQGIQVATAEGILNL 237
Query: 282 MRLQRAGGRVLDIGDFLLGCP--VIIGCIV 309
LQ AG + + + D L I G +
Sbjct: 238 ESLQPAGKKAMSVQDLLNSRREWFIPGNRL 267
>gi|289623804|ref|ZP_06456758.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289647101|ref|ZP_06478444.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. aesculi str.
2250]
gi|330870355|gb|EGH05064.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 663
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 74/313 (23%), Positives = 129/313 (41%), Gaps = 10/313 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V + LQAL+ + + I +V+T P K+ +V + +
Sbjct: 1 MSPKAVVFAYHDIGCVGLQALLGAGYEIAAVFTHADDPKE----KTFFGSVAQLCARHGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E+ D Y ++ + +L G N H SLLPR+RG
Sbjct: 57 PVHAPEDPNHPLWVERIGKLAPDFIFSFYYRQLLGEPLLACASKGALNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G++ETG+ + +M K D GP+ ++V ISS L +L A +
Sbjct: 117 APANWVLVNGESETGVTLHQMVKRADAGPIVAQQRVSISSTDTALTLHGKLREAAADLLS 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
E + L L +PQ E + + + + +++ A ++N IR P+PGA+
Sbjct: 177 ETLPLLALGQLSGTPQDETLASCFGRRTPADGLIDWSLPATQLYNLIRAVTQPYPGAFC- 235
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQR-AGGRVLDIGD 296
+G + ++ PG VI+ + IAC +G++ I QR G L
Sbjct: 236 -AVGENKLIVWAASAEAGNNGEAPGTVISHDPLRIACGEGSLVINAGQRGDNGLYLSGAQ 294
Query: 297 FLLGCPVIIGCIV 309
++ G +
Sbjct: 295 LAREFGLVEGSQL 307
>gi|297190506|ref|ZP_06907904.1| methionyl-tRNA formyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
gi|197717819|gb|EDY61727.1| methionyl-tRNA formyltransferase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 315
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 79/310 (25%), Positives = 135/310 (43%), Gaps = 20/310 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TLQAL+ S H +V V T P + K +V A+E +P
Sbjct: 1 MRVVMFGYQTWGHRTLQALLDSEHDVVLVVTHP--KSEHAYEKIWSDSVADLAEEHGVPV 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L+ + EE + + + D+ V + IP RI + G N H SLLP++ G +P
Sbjct: 59 LIRNRPDDEELFMRLKEADPDIIVANNWRTWIPPRIFGLPRHGTLNVHDSLLPKYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ E G+ MD LD G + VP+ L L A EA
Sbjct: 119 LIWALINGEREVGVTAHMMDDELDAGDIVVQHAVPVGPTDTATDLFHRTVDLIAPVTTEA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS-PFPGAWLEMM 240
+ + + Q + ++ K + + R+++ AE++ IRA S P+P A+
Sbjct: 179 LALIASGRTDFTKQDRSQASFFHKRAAEDIRIDWNWPAEDLERLIRAQSAPYPSAFTF-- 236
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAG 288
+K +R+++L + + +G G PG + + I A + I R++
Sbjct: 237 --HKGKRLEILAAVVSQGRYGGTPGRIFYRESGGVVIVAGADARTGRNHGLAITRIRTED 294
Query: 289 GRVLDIGDFL 298
G + D+
Sbjct: 295 GEEMAATDYF 304
>gi|224069492|ref|XP_002302984.1| methionyl-trna formyltransferase [Populus trichocarpa]
gi|222844710|gb|EEE82257.1| methionyl-trna formyltransferase [Populus trichocarpa]
Length = 356
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 81/330 (24%), Positives = 143/330 (43%), Gaps = 29/330 (8%)
Query: 5 VVFMGTSEFAVATLQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
+VF+G+ + A L AL ++S + ++ TQPP RG K + S V + A +
Sbjct: 28 LVFLGSPQVAATVLDALFNASKAPNSLFEVAAIVTQPPARR-DRGKKLMPSPVAEFALDT 86
Query: 59 SLP----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
P + ++ + AYG ++P + LN +G N H SLLP
Sbjct: 87 GFPSDLIFTPERAGEDTFLSTLRALQPELCITAAYGNILPTKFLNIPPMGTVNIHPSLLP 146
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
+RGAAP+QRA+ G ETG+++ + LD GPV + + I L L +
Sbjct: 147 LYRGAAPVQRALQDGAKETGVSLAFTVRALDAGPVIAYETLEVDDQIKAPDLLALLFLEG 206
Query: 175 AHAMVEAMDKLEQN--NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ ++ + + L PQ ++ T A KIS E+ ++F + A +HN +RA + +
Sbjct: 207 SKLLIHELPSILHGSARLKAQPQDDSKATLAPKISVEESWLSFDQEASVLHNKVRAFAGW 266
Query: 233 PGAWLEMMIGN------KHERIKLLESQLVEGEGKPG------EVINPNFTIACS-QGAV 279
PG ++ I + +K++ +++ + G + + C A+
Sbjct: 267 PGTRAKVAIVDDENDRRNIVELKIITTRVCDRSIVQGDEADDITYVKDSLVFPCGRSTAL 326
Query: 280 RIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
++ LQ G +V F G G +
Sbjct: 327 EVLELQLPGKKVFRAAAFWNGLR---GQKL 353
>gi|148242572|ref|YP_001227729.1| methionyl-tRNA formyltransferase [Synechococcus sp. RCC307]
gi|166215523|sp|A5GU17|FMT_SYNR3 RecName: Full=Methionyl-tRNA formyltransferase
gi|147850882|emb|CAK28376.1| Methionyl-tRNA formyltransferase [Synechococcus sp. RCC307]
Length = 330
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 104/324 (32%), Positives = 158/324 (48%), Gaps = 44/324 (13%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--SL 60
+RV+F GT +AV TL+AL + H IV V TQP R G RG + S V +A + +
Sbjct: 1 MRVLFWGTPAYAVPTLEALHGAGHQIVGVVTQPDRRRG-RGSSLMPSPVKARALDLLGDV 59
Query: 61 PALVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
P L P ++ +E Q + AD++VVVA+G ++P +L LG +NGH SLLPRWRG
Sbjct: 60 PVLTPQRIRREPETQEQLAALQADLSVVVAFGQLLPPEVLQQPPLGCWNGHGSLLPRWRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A PIQ +M GD +TG+ IM M+ LDTGPV R + + N AGL + LS L A
Sbjct: 120 AGPIQWCLMEGDAQTGVGIMAMEPGLDTGPVLLERALDVQLLENAAGLAERLSHLTAELF 179
Query: 179 VEAMDKLEQNNLPL----------SPQIENGITYAEKISKGETRVNFCRSAENVHNHIRA 228
VEA+ ++E +PQ + G++ A +SK + R+++ A +H +
Sbjct: 180 VEALPRIEAAGPGPEAERLSRLAVTPQSDEGVSLARLLSKDDYRIDWSERALAIHRKVMG 239
Query: 229 LSPFPGAWLEMMIGNKHERIKLLESQLVEG-------------------EGKPGEVINP- 268
L P + +R+KLL ++ + +PG ++
Sbjct: 240 LFPGAHC------SWRGKRLKLLATEPLVARLADQLSPQAAALSQRQWPSAEPGSILEAV 293
Query: 269 ---NFTIACSQGAVRIMRLQRAGG 289
+A S + + + Q G
Sbjct: 294 RGVGLVLATSGCPILLRQAQLEGK 317
>gi|306814631|ref|ZP_07448793.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli NC101]
gi|305852025|gb|EFM52477.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli NC101]
Length = 660
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 134/310 (43%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I +IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLIHDKILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ N L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPNDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQCENEATCFGRRTPDDSFLEWHKPAFMLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|323967698|gb|EGB63110.1| NAD dependent epimerase/dehydratase [Escherichia coli M863]
gi|327252527|gb|EGE64186.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_7v]
Length = 660
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 67/312 (21%), Positives = 135/312 (43%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHSDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQMSPEVIFSFYYRHLIHDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPEDSFLEWHKPAAVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+++ + S++ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 ----NQKFTVWSSRVHSHAPAAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G +
Sbjct: 293 AQSLGLVQGSRL 304
>gi|300918582|ref|ZP_07135170.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 115-1]
gi|300414234|gb|EFJ97544.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 115-1]
Length = 660
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHNMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDDVNHPLWVERIAQLSPDVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|237732290|ref|ZP_04562771.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Citrobacter sp. 30_2]
gi|226907829|gb|EEH93747.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Citrobacter sp. 30_2]
Length = 660
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 69/312 (22%), Positives = 139/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QAL+ + + I +++T P G K+ +V + A +P
Sbjct: 1 MKAVVFAYHDMGCQGVQALLDAGYEIAAIFTHTDNP----GEKAFFGSVSRLAASVGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ + + +S DV Y ++ IL+ G +N H SLLP++RG AP
Sbjct: 57 YAPDEVNHPLWIERISQLAPDVIFSFYYRHLLSDEILSLAPKGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++V IS L +L H + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQQRVAISPEDVALTLHHKLCQAARHLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + + PQ + T + + ++ +++ + A +HN +R P+PGA+ +
Sbjct: 177 LPAINAGSYSEFPQQDADATCFGRRTPEDSFLDWNKPAAELHNQVRAVSDPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ + S++ + +PG VI+ + IAC GA+ I+ Q G +
Sbjct: 237 T----QKFTVWSSRVCTNDIAAQPGTVISVSPLLIACVDGALEIITGQAGDGIAMQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G +
Sbjct: 293 AQVLGLVPGSRL 304
>gi|317054447|ref|YP_004118472.1| formyl transferase domain-containing protein [Pantoea sp. At-9b]
gi|316952442|gb|ADU71916.1| formyl transferase domain protein [Pantoea sp. At-9b]
Length = 306
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 72/311 (23%), Positives = 130/311 (41%), Gaps = 11/311 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + L AL+++ I +V+T G +V + AQ ++P
Sbjct: 1 MKAVIFAYHDMGCTGLNALLNAGFDIGAVFTHADAA----GENHFHGSVAQLAQAHNIPV 56
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+P + Q + + + D+ +++ ++ + IL +LG + ASLLP RG A
Sbjct: 57 FMPEDINQPTWVERLTALAPDMLFSLSFRQILSRDILACARLGAFGVQASLLPAHRGRAH 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M D GP+ KV I + L +L +
Sbjct: 117 LNWVLIKGETETGVTLFRMTTRPDCGPILAQEKVSILPEDDAFSLHNKLVQTSGRMLAVW 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ L N L Q E + + + +++ RSA+ VHN +R SP+PGA+ +
Sbjct: 177 LPALMANQLRERTQDETQASSFGRRKPEDGAIDWQRSAQEVHNLVRGLASPWPGAYSTVQ 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINP-NFTIACSQGAVRIMRLQR-AGGRVLDIGDFL 298
E KPG V++ F IAC G + I+ Q GG + +
Sbjct: 237 GQRFVVWHSRFSVDRAE--VKPGTVLSVMPFIIACGSGQLEILAGQTGEGG-RVSGSELA 293
Query: 299 LGCPVIIGCIV 309
+ G ++
Sbjct: 294 RSLMITPGTLL 304
>gi|170767415|ref|ZP_02901868.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia albertii TW07627]
gi|170123749|gb|EDS92680.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia albertii TW07627]
Length = 660
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 68/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ ++V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHADNP----GEKAFYASVARLAAETGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ + DV Y +I IL +G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQMSPDVIFSFYYRHLISDDILQLAPVGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+NETG+ + +M K D G + ++V IS + L +L + +
Sbjct: 117 LNWVLVNGENETGVTLHRMVKKADAGAIIAQQRVVISPDDIAITLHHKLCHTARLLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ + Q EN T + + ++ +++ + A+ +HN +R P+PGA+
Sbjct: 177 LPAIKHGHFQEIAQRENEATCFGRRTPDDSFLDWHKPADVLHNMVRAVADPWPGAFSYAG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+PG VI+ +AC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPDTSTAQPGSVISVAPLRVACGHGALEIITGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVEGSRL 304
>gi|218690418|ref|YP_002398630.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli ED1a]
gi|254806286|sp|B7MXT6|ARNA_ECO81 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|218427982|emb|CAR08902.2| fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase
[Escherichia coli ED1a]
Length = 660
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 68/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+S+ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLSAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWMERIAQLSPEVIFSFYYRHLICDEILQLAPRGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|319950532|ref|ZP_08024442.1| methionyl-tRNA formyltransferase [Dietzia cinnamea P4]
gi|319435782|gb|EFV90992.1| methionyl-tRNA formyltransferase [Dietzia cinnamea P4]
Length = 290
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 92/291 (31%), Positives = 140/291 (48%), Gaps = 12/291 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT + AV +L+AL+ S H +V+V ++P G RG S V A +
Sbjct: 1 MRLVFAGTPDVAVPSLRALLDSDRHEVVAVVSRPDARTG-RGRGLSRSPVAAAADAAGIE 59
Query: 62 ALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P E+ D VVAYG ++P+ +L+ G+ N H SLLP WRGAA
Sbjct: 60 VLTPPNARDSGFAERLRELAPDAVPVVAYGHLVPRPVLDIPAHGWINLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ AI AGD TG ++D+ +DTGPV I L LS A +V
Sbjct: 120 PVNAAIAAGDEVTGATTFRLDEGMDTGPVLGTMTETIRPRDTAGDLLGRLSESGAGLLVA 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D LE L PQ +G+++A K++ + RV + A V HIR+++P PGAW +
Sbjct: 180 TLDGLEAGELRPVPQPTDGVSHAGKLTVDDARVRWTDPALAVDRHIRSVTPAPGAWTTLG 239
Query: 241 IGNKHERIKLLESQLVEGEG---KPGEV--INPNFTIACSQGAVRIMRLQR 286
ER+K+ ++ E +PG + + + + + +Q
Sbjct: 240 G----ERVKIGSARPAEETAPDLEPGRIAWDKKAVHVGTASAPMVLETIQP 286
>gi|331683931|ref|ZP_08384527.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli H299]
gi|331078883|gb|EGI50085.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli H299]
Length = 660
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 66/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPTIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|213618712|ref|ZP_03372538.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 96
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR++F GT +FA L AL++S H+IV V+TQP RPAG RG K + S V A+E LP
Sbjct: 4 SLRIIFAGTPDFAARHLDALLTSGHNIVGVFTQPDRPAG-RGKKLMPSPVKVLAEEKGLP 62
Query: 62 ALVPTKLGQEEYEQFLSFNADVAV 85
P L +E + ++ +
Sbjct: 63 VFQPVSLRPQENQHLVADLHADVM 86
>gi|315298086|gb|EFU57355.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 16-3]
Length = 660
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPRGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|293410618|ref|ZP_06654194.1| polymyxin resistance protein ArnA_DH [Escherichia coli B354]
gi|291471086|gb|EFF13570.1| polymyxin resistance protein ArnA_DH [Escherichia coli B354]
Length = 660
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 68/312 (21%), Positives = 139/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPDVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPEDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+++ + S++ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 ----NQKFTVWSSRVHSHAPAAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G +
Sbjct: 293 AQTLGLVQGSRL 304
>gi|331658338|ref|ZP_08359300.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TA206]
gi|331056586|gb|EGI28595.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TA206]
Length = 660
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPRGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|302188658|ref|ZP_07265331.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. syringae
642]
Length = 513
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 74/314 (23%), Positives = 126/314 (40%), Gaps = 11/314 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V + LQAL+ + + I +V+T P G K+ +V + +
Sbjct: 1 MSTKAVVFAYHDIGCVGLQALLDAGYEIAAVFTHADDP----GEKTFFGSVAQMCARHGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
E+ D Y ++ +L K N H SLLPR+RG
Sbjct: 57 AVHAPEDPNHPLWVERIGKLAPDFIFSFYYRQLLGDSLLACAKKAALNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G++ETG+ + +M K D GP+ ++V IS+ L +L A +
Sbjct: 117 APANWVLVNGESETGVTLHQMVKRADAGPIVAQQRVAISATDTALTLHGKLRDAAADLLC 176
Query: 180 EAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWL 237
E + L P +PQ E+ TY + + + +++ A ++N IR P+PGA+
Sbjct: 177 ETLPLLAAQGQLPGTPQDESRATYFGRRTPADGLIDWSLPASQLYNLIRAVTQPYPGAFC 236
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQR-AGGRVLDIG 295
+ + PG VI+ IAC +G++ I QR G L
Sbjct: 237 PVGDNK--LIVWAASVDTSSNGEAPGTVISNEPLRIACGEGSLVITAGQRGDNGLYLSGA 294
Query: 296 DFLLGCPVIIGCIV 309
++ G +
Sbjct: 295 QLAREFGLVAGSQL 308
>gi|145356701|ref|XP_001422565.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582808|gb|ABP00882.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 386
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 87/327 (26%), Positives = 146/327 (44%), Gaps = 29/327 (8%)
Query: 4 RVVFMGTSEFAVATLQALVS------SSHSIVSVYTQPPRPAGRRGLKS---VLSAVHKK 54
RVVF+GT E A L ++ S+ + +V +QP RP G RG KS S V +
Sbjct: 55 RVVFLGTPECAKEVLARVLDAAEGRESAFEVAAVVSQPGRPRG-RGRKSDEAAPSPVAEL 113
Query: 55 AQEFSLP----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
A + + + + + D+AV AYG +PQ+ L+ KLG N H
Sbjct: 114 ALRRGMAEDRVLCPEKANEEWFLDALRALDVDLAVTAAYGNFLPQKFLDIPKLGTLNIHP 173
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL 170
SLLP+WRGAAP+QRA+ +G +ETG+++ +D GPV P+ + L EL
Sbjct: 174 SLLPQWRGAAPVQRALESGQSETGVSVAYTVLKMDAGPVLRQVTRPLKGDEKAPDLLTEL 233
Query: 171 SVLCAHAMVEAMDKLEQNNL--PLSPQIENGITYAEKISKGETRVNFCRS---AENVHNH 225
A++E + + + PQ E +++A K+S E ++F + +
Sbjct: 234 FETGVGALLEELPSVFAGDAAARAVPQSEETLSHAAKVSPEEGELDFTKQSALECHNKVR 293
Query: 226 IRALSPFPGAWLEMMIGNKHE----RIKLLESQLV---EGEGKPG--EVINPNFTIAC-S 275
A P A L++ E +K++ +++ + + G EV + C
Sbjct: 294 AFAGWPGTKATLKIKANGDEESKEVVLKIITTRVSAEGDEKAANGQVEVTKKLLRVPCAG 353
Query: 276 QGAVRIMRLQRAGGRVLDIGDFLLGCP 302
G + ++ +Q G + + F+ G
Sbjct: 354 GGWLEVLEVQPPGKKAMPANAFINGIK 380
>gi|91211549|ref|YP_541535.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli UTI89]
gi|117624448|ref|YP_853361.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli APEC O1]
gi|218559171|ref|YP_002392084.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli S88]
gi|237704733|ref|ZP_04535214.1| bifunctional polymyxin resistance protein aRNA [Escherichia sp.
3_2_53FAA]
gi|123084415|sp|Q1R9G0|ARNA_ECOUT RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|134035391|sp|A1ADA7|ARNA_ECOK1 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|226723708|sp|B7MG22|ARNA_ECO45 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|91073123|gb|ABE08004.1| hypothetical protein YfbG [Escherichia coli UTI89]
gi|115513572|gb|ABJ01647.1| putative nucleoside-diphosphate-sugar epimerase [Escherichia coli
APEC O1]
gi|218365940|emb|CAR03684.1| fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase
[Escherichia coli S88]
gi|226901099|gb|EEH87358.1| bifunctional polymyxin resistance protein aRNA [Escherichia sp.
3_2_53FAA]
gi|294491185|gb|ADE89941.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli IHE3034]
gi|307626206|gb|ADN70510.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli UM146]
gi|315285878|gb|EFU45316.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 110-3]
gi|323952050|gb|EGB47924.1| NAD dependent epimerase/dehydratase [Escherichia coli H252]
gi|323956024|gb|EGB51777.1| NAD dependent epimerase/dehydratase [Escherichia coli H263]
Length = 660
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 68/310 (21%), Positives = 134/310 (43%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPRGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + +SA +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKSASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|308185448|ref|YP_003929580.1| bifunctional polymyxin resistance protein arna [Pantoea vagans
C9-1]
gi|308055728|gb|ADO07898.1| Bifunctional polymyxin resistance protein arnA [Pantoea vagans
C9-1]
Length = 659
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 68/310 (21%), Positives = 131/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + + AL+++ + I +++T +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCVGINALLNAGYEITAIFTHNDVATENN----FFGSVARLAAEHGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ + ++ Y ++ IL + G +N H SLLP++RG AP
Sbjct: 57 YAPDEANHPIWLDRIRTMAPEMIFSFYYRHLLSDEILQCAQKGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG+ + +M K D G + +KV I N L ++L + +
Sbjct: 117 LNWALVNGERETGVTLHRMVKRADAGNILAQQKVAIDDQDNALTLHRKLIQAAEQLLSDV 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ +L Q + PQ E+ T + + R+++ + A +HN +R P+PGA+
Sbjct: 177 LPRLRQGEVSEWPQDESQATRVGGRTAEDGRIDWNQPAATIHNLVRAVTDPWPGAFAFAG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ + KPG VI+ F IAC +GA+ I Q G ++
Sbjct: 237 SVKFIVWKS--RVHPQQQQAKPGTVISKQPFLIACGEGALEIQTGQSEHGVYMNGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G ++
Sbjct: 295 SLGMVPGALL 304
>gi|324117864|gb|EGC11763.1| NAD dependent epimerase/dehydratase [Escherichia coli E1167]
Length = 660
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 66/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAHLAPEVIFSFYYRHLICDAILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPTIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISIAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|300926358|ref|ZP_07142158.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 182-1]
gi|301328743|ref|ZP_07221796.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 78-1]
gi|300417635|gb|EFK00946.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 182-1]
gi|300844891|gb|EFK72651.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 78-1]
Length = 660
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 66/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAHLAPEVIFSFYYRHLICDAILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPTIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISIAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|300931395|ref|ZP_07146724.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 187-1]
gi|300460765|gb|EFK24258.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 187-1]
Length = 660
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 66/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M D+G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVTRADSGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|308809335|ref|XP_003081977.1| Fmt protein (ISS) [Ostreococcus tauri]
gi|116060444|emb|CAL55780.1| Fmt protein (ISS) [Ostreococcus tauri]
Length = 385
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 88/327 (26%), Positives = 147/327 (44%), Gaps = 29/327 (8%)
Query: 4 RVVFMGTSEFAVATLQALVSS------SHSIVSVYTQPPRPAGRRGLKS---VLSAVHKK 54
R+VF+GT E A L ++ + + + +V +QP RP G RG KS S V +
Sbjct: 54 RLVFLGTPECASEVLGKVLDAAEAESATFEVCAVVSQPGRPRG-RGRKSDVPPPSPVAEL 112
Query: 55 AQEFSLP----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
A + + + + + + DV V AYG +PQ+ L+ K G N H
Sbjct: 113 ALKRGMAEDRVLCPEKANEEWFLDALRALDVDVMVTAAYGNFLPQKFLDIPKFGTLNIHP 172
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL 170
SLLP+WRGAAP+QRA+ +G +ETG+++ +D GPV P+ + L EL
Sbjct: 173 SLLPQWRGAAPVQRALESGQSETGVSVAYTVLKMDAGPVLRQITRPLKGDEKAPELLTEL 232
Query: 171 SVLCAHAMVEAMDKLEQNNL--PLSPQIENGITYAEKISKGETRVNFCRS---AENVHNH 225
+A++E + + PQ E +++A K+S E +NF + +
Sbjct: 233 FETGVNALLEELPSVFAGEAAARAVPQDEATLSHAAKVSPEEGELNFAKQSAIECHNKVR 292
Query: 226 IRALSPFPGAWLEMMIGNKHE----RIKLLESQLVE---GEGKPGEV--INPNFTIACSQ 276
A P A L++ + E +K+ +++ E + GEV + C
Sbjct: 293 AFAGWPGTKATLKVKANGEEEAKEVVLKIATTRVSEEGDAKAANGEVEVSKKVLRVPCGG 352
Query: 277 G-AVRIMRLQRAGGRVLDIGDFLLGCP 302
G + ++ +Q G +V+ G F+ G
Sbjct: 353 GGWLELLEVQPPGKKVMPTGAFINGIK 379
>gi|110642463|ref|YP_670193.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 536]
gi|191169920|ref|ZP_03031474.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli F11]
gi|300981194|ref|ZP_07175403.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 200-1]
gi|123049026|sp|Q0TFI7|ARNA_ECOL5 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|110344055|gb|ABG70292.1| hypothetical protein YfbG [Escherichia coli 536]
gi|190909436|gb|EDV69021.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli F11]
gi|300307644|gb|EFJ62164.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 200-1]
gi|324013145|gb|EGB82364.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 60-1]
Length = 660
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 68/310 (21%), Positives = 134/310 (43%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPRGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + +SA +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKSASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|26248643|ref|NP_754683.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli CFT073]
gi|300983317|ref|ZP_07176531.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 45-1]
gi|301049009|ref|ZP_07195996.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 185-1]
gi|81590105|sp|Q8FFM1|ARNA_ECOL6 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|26109048|gb|AAN81251.1|AE016763_210 Hypothetical protein yfbG [Escherichia coli CFT073]
gi|300299201|gb|EFJ55586.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 185-1]
gi|300408575|gb|EFJ92113.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 45-1]
gi|315292207|gb|EFU51559.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 153-1]
Length = 660
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 68/310 (21%), Positives = 134/310 (43%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPRGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + +SA +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKSASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|301060254|ref|ZP_07201121.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [delta proteobacterium NaphS2]
gi|300445766|gb|EFK09664.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [delta proteobacterium NaphS2]
Length = 674
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 69/310 (22%), Positives = 122/310 (39%), Gaps = 7/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + ++AL+ + I +V+T P AV + A +P
Sbjct: 1 MKTIVLAYHNIGCTGIKALLKNGFDIKAVFTHKDDPKEN----IWFDAVAELAARKHIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ ++ Y ++ IL+ G N H SLLPR+RG P
Sbjct: 57 YAPDDINHPLWVQKIRELAPEILFSFYYRNLVRSPILDIPAKGCLNLHGSLLPRYRGRVP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G+ TG+ + M D G + ++ IS N A L ++ + + E
Sbjct: 117 INWALINGEKRTGVTLHYMTTRPDDGDMVSQVEIEISENDTAATLHEKAAGAAGDMLDEI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ KL+ + P PQ + +Y + +N+ A + N +RA++ M
Sbjct: 177 LPKLKAGSAPRIPQDHSKASYYGGRRPSDGEINWDVPAHRIRNLVRAVTRPFPGAFSHMG 236
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
K + E +G KPG VI+ + C GAVRI Q+A +D +
Sbjct: 237 DRKCLFWAVSEVAGDDG-AKPGTVISVAPLVVVCKTGAVRIETAQQADDVPMDGAQMAVQ 295
Query: 301 CPVIIGCIVG 310
++ G G
Sbjct: 296 MGLVEGMRFG 305
>gi|33865729|ref|NP_897288.1| putative methionyl-tRNA formyltransferase [Synechococcus sp. WH
8102]
gi|39931217|sp|Q7U6Z1|FMT_SYNPX RecName: Full=Methionyl-tRNA formyltransferase
gi|33632899|emb|CAE07710.1| putative methionyl-tRNA formyltransferase [Synechococcus sp. WH
8102]
Length = 338
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 94/332 (28%), Positives = 152/332 (45%), Gaps = 39/332 (11%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+++ GT +AV TL+ L + H+IV V +QP R G RG + V SAV ++A +LP
Sbjct: 1 MRILYWGTPAYAVPTLRQLHQAGHTIVGVVSQPDRRRG-RGQQLVASAVKQEALNLNLPV 59
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ ++ Q + AD +VVVA+G ++P +L LG +NGH SLLPRWRGAA
Sbjct: 60 FTPERIKKDSDCQAQLAALKADASVVVAFGQILPLEVLEQPPLGCWNGHGSLLPRWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQ +I+ GD ETG+ +M M++ LDTGPV R++ I N L ++LS L A MVE
Sbjct: 120 PIQWSILDGDAETGVGVMAMEEGLDTGPVLLERRLSIGLQDNAHALAEKLSGLTAELMVE 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR---ALSPFPGAWL 237
AM +E + + + + + C+ + G +
Sbjct: 180 AMPLIEAVGAGPTDERLHRLGVQHQAEASCYARMLCKQDYQIDWSNSALAIHRQVMGLYP 239
Query: 238 EMMIGNKHERIKLLESQL----VEGEGKP----------------GEVI----NPNFTIA 273
+R+KL +++ ++ + P G V+ + ++
Sbjct: 240 GAQTSWNGKRLKLTQTEPLIDRLKDQLSPEAQELVGQWPTGGHAGGTVLACIQDLGLVVS 299
Query: 274 CSQGAVRIMRLQRAGGRV---------LDIGD 296
S + I Q G + +
Sbjct: 300 SSGCPLLIREAQLEGKSRSRGQALVQQMAAAE 331
>gi|27904915|ref|NP_778041.1| methionyl-tRNA formyltransferase [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|29839229|sp|P59557|FMT_BUCBP RecName: Full=Methionyl-tRNA formyltransferase
gi|27904313|gb|AAO27146.1| methionyl-tRNA formyltransferase [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 323
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 95/319 (29%), Positives = 166/319 (52%), Gaps = 17/319 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+L++VF GT +F+ L+ LV +++H I+ V T+P +P G RG + S K A++ +
Sbjct: 8 SLKIVFAGTDKFSKDHLKILVTNTTHKILGVITKPDQPLG-RGKQITSSLTKKLAKKLKI 66
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P PT Y Q + NAD+ +VV+YG +IPQ ILN LG N H SLLPRWRG
Sbjct: 67 PVFQPTALNTSTFYNQIYNLNADIIIVVSYGKIIPQLILNIFPLGGINVHTSLLPRWRGP 126
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PIQ A++ GD TGI I+KM+ ++DTG + + I+ + + LQ +L +L ++
Sbjct: 127 SPIQSALLNGDKLTGITIIKMNNNIDTGDIIYSSSCIINKSDTSVTLQNKLKILSCQGLI 186
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + + P+ + KI+K + ++ + +SA + IRA +P+P + ++
Sbjct: 187 QVLKNFKSSYFPIRQSNLATY--SNKINKEDAKLIWLKSAIQLERSIRAYNPWPICYFKI 244
Query: 240 MIGNKHERIKLLESQLV----EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
N IK+ + ++ + + + GE+I I S+ + I +Q G +++
Sbjct: 245 ---NNQLSIKVWSANVIIHFNQHKYQIGEIILINKHGMQIKTSKNILNITTVQLPGKKIM 301
Query: 293 DIGDFLLGCPV--IIGCIV 309
+ I G +
Sbjct: 302 HANNLCNSKNKWCIPGTKL 320
>gi|297198311|ref|ZP_06915708.1| methionyl-tRNA formyltransferase [Streptomyces sviceus ATCC 29083]
gi|297147059|gb|EFH28469.1| methionyl-tRNA formyltransferase [Streptomyces sviceus ATCC 29083]
Length = 194
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 64/151 (42%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 44 PMKLVFAGTPEVAVPALDALIASGRHEVAAVVTRPDAPAG-RGRRLVASPVAERAEEAGI 102
Query: 61 PALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P K E+ E+ D VVAYG ++P+ L+ G+ N H SLLP WRGA
Sbjct: 103 EVLKPVKPRDPEFLERLREIAPDCCPVVAYGALLPRVALDIPAHGWVNLHFSLLPAWRGA 162
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVA 150
AP+Q +IMAGD TG + +++ LD+GPV
Sbjct: 163 APVQHSIMAGDEITGASTFLIEEGLDSGPVY 193
>gi|293415549|ref|ZP_06658192.1| bifunctional polymyxin resistance protein aRNA [Escherichia coli
B185]
gi|291433197|gb|EFF06176.1| bifunctional polymyxin resistance protein aRNA [Escherichia coli
B185]
Length = 660
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|324006635|gb|EGB75854.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 57-2]
Length = 660
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 68/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+S+ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLSAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPRGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|307311182|ref|ZP_07590826.1| NAD-dependent epimerase/dehydratase [Escherichia coli W]
gi|306908688|gb|EFN39185.1| NAD-dependent epimerase/dehydratase [Escherichia coli W]
gi|315061550|gb|ADT75877.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli W]
gi|323377869|gb|ADX50137.1| NAD-dependent epimerase/dehydratase [Escherichia coli KO11]
Length = 660
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 66/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAHLAPEVIFSFYYRHLICDAILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPTIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISIAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|238919324|ref|YP_002932839.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Edwardsiella ictaluri 93-146]
gi|238868893|gb|ACR68604.1| Bifunctional polymyxin resistance protein ArnA, putative
[Edwardsiella ictaluri 93-146]
Length = 659
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 66/312 (21%), Positives = 132/312 (42%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + A +Q+L+ + + I ++ T P G +V + A + ++P
Sbjct: 1 MKAVVFAYHDMGCAGVQSLIDAGYEIAAIVTHQDAP----GENLFFGSVARLAAQHNIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ + V Y ++ IL G +N H SLLP +RG AP
Sbjct: 57 FAPDDVNHPLWVERLRALQPQVIFSFYYRHLLNDEILALAPQGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ E+G+ + +M+K D G + ++ I+ L +L + EA
Sbjct: 117 LNWVLVNGETESGVTLHRMEKRADAGNIIAQHRIAIAEEDTALTLHHKLCQCARVLLAEA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ + PQ E+ TY + + + R+ + + A ++N +R P+PGA+
Sbjct: 177 LPQIRSGSYAEFPQDESAATYVGRRTPADGRLEWSKPARELYNLVRAVTEPWPGAFSYAG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEV-INPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ ++++ +PG V + TIAC +GA+ I+ Q G +
Sbjct: 237 NRQF----TVWQARVRRDLPAARPGTVLLASPLTIACGEGALEIVAGQPQDGLYMQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G I+
Sbjct: 293 AESLGLVEGAIL 304
>gi|227887314|ref|ZP_04005119.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 83972]
gi|227835664|gb|EEJ46130.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 83972]
gi|307554320|gb|ADN47095.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli ABU 83972]
Length = 660
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 68/310 (21%), Positives = 134/310 (43%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPRGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMAKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + +SA +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKSASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|320657321|gb|EFX25123.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O55:H7 str. 3256-97
TW 07815]
Length = 660
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEICAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|308190052|ref|YP_003922983.1| methionyl-tRNA formyltransferase [Mycoplasma fermentans JER]
gi|319777346|ref|YP_004136997.1| methionyl-tRNA formyltransferase [Mycoplasma fermentans M64]
gi|238809522|dbj|BAH69312.1| hypothetical protein [Mycoplasma fermentans PG18]
gi|307624794|gb|ADN69099.1| methionyl-tRNA formyltransferase [Mycoplasma fermentans JER]
gi|318038421|gb|ADV34620.1| Methionyl-tRNA formyltransferase [Mycoplasma fermentans M64]
Length = 278
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 84/291 (28%), Positives = 144/291 (49%), Gaps = 15/291 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++ GT FAV + L+++ +V++ +QP RP+ RG K + AQ++++
Sbjct: 1 MKLLLAGTPAFAVEIFEKLINN-FEVVAIVSQPDRPS-VRGHKLAPTPTKLLAQKYNIKC 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P K+ Q + E N D + A+G IP+ +LN K N H SLLP++RGAAPI
Sbjct: 59 FQPEKISQIKDELQT-LNYDYLITCAFGQYIPESVLNIAKKLSLNIHGSLLPKYRGAAPI 117
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q +++ D ETGI++M+M K +D G V + + I + L +LS L A +V+ +
Sbjct: 118 QYSLLNNDQETGISLMEMIKQMDAGDVFVQKAIKIDEYDTASTLFNKLSKLSADNIVQWL 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ L+QN L Q E+ +T + K+ K + +N + + N IRA PGA+ +
Sbjct: 178 NDLDQNKLKRIKQDESKVTLSPKLEKEKALLNESLTMQEAINIIRAYEMNPGAYTFI--- 234
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLD 293
++RIK+ + E I + G + Q + +
Sbjct: 235 -DNKRIKIFFATKKE--------IKNVPKLKFKDGYLFATDYQYESKKRVK 276
>gi|300903638|ref|ZP_07121556.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 84-1]
gi|301303286|ref|ZP_07209411.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 124-1]
gi|300404374|gb|EFJ87912.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 84-1]
gi|300841460|gb|EFK69220.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 124-1]
gi|315255189|gb|EFU35157.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 85-1]
Length = 660
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVAHLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFTYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISIAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|323171937|gb|EFZ57581.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
LT-68]
Length = 660
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHNMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDDVNHPLWVERIAQLSPDVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 MLGLVQGSRL 304
>gi|251791777|ref|YP_003006498.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Dickeya zeae Ech1591]
gi|247540398|gb|ACT09019.1| NAD-dependent epimerase/dehydratase [Dickeya zeae Ech1591]
Length = 663
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 72/312 (23%), Positives = 139/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V +F L+ALV++ +++ +V+T PA + +V + A E +P
Sbjct: 1 MKAVVFAYHDFGCVGLRALVAAGYTVEAVFTHADNPAENQ----FFGSVARTAAELGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ + + DV Y ++ IL + G YN H SLLPR+RG AP
Sbjct: 57 FAPEDVNHPLWVERIAAMSPDVIFSFYYRHLLSDAILQSATHGAYNLHGSLLPRYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG+ + +M D G + ++V I + L ++L + + +A
Sbjct: 117 LNWALVNGETETGVTLHRMVTRADAGNIVAQQRVAIDESDTALSLHRKLRDVAEQLLKDA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + Q E+ TY + + + R+ + R A ++N +R P+PGA+ +
Sbjct: 177 LPAIAAGKANDIAQDESQATYVGRRTPEDGRIEWQRPARTLYNLVRAVTEPWPGAFSFVG 236
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + ++++ KPG V++ + +AC A+ I+ Q G L
Sbjct: 237 TT----KFIIWQAKVRTDFAAAKPGTVLSTSPLVVACGSDALEIVTGQGDNGIYLQGAQL 292
Query: 298 LLGCPVIIGCIV 309
++ G I+
Sbjct: 293 AQSLGLVTGAIL 304
>gi|15802804|ref|NP_288831.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 EDL933]
gi|15832397|ref|NP_311170.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. Sakai]
gi|168749666|ref|ZP_02774688.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4113]
gi|168755009|ref|ZP_02780016.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4401]
gi|168761304|ref|ZP_02786311.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4501]
gi|168767883|ref|ZP_02792890.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4486]
gi|168773017|ref|ZP_02798024.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4196]
gi|168780112|ref|ZP_02805119.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4076]
gi|168787165|ref|ZP_02812172.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC869]
gi|168798427|ref|ZP_02823434.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC508]
gi|195935634|ref|ZP_03081016.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4024]
gi|208809714|ref|ZP_03252051.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4206]
gi|208813824|ref|ZP_03255153.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4045]
gi|208821467|ref|ZP_03261787.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4042]
gi|209399006|ref|YP_002271667.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4115]
gi|217327888|ref|ZP_03443971.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|254794150|ref|YP_003078987.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str.
TW14359]
gi|261223289|ref|ZP_05937570.1| bifunctional UDP-L-Ara4N formyltransferase [Escherichia coli
O157:H7 str. FRIK2000]
gi|261259161|ref|ZP_05951694.1| bifunctional UDP-L-Ara4N formyltransferase [Escherichia coli
O157:H7 str. FRIK966]
gi|291283500|ref|YP_003500318.1| Bifunctional polymyxin resistance protein arnA [Escherichia coli
O55:H7 str. CB9615]
gi|21542315|sp|Q8XDZ3|ARNA_ECO57 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|226723709|sp|B5YXP8|ARNA_ECO5E RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|12516601|gb|AAG57386.1|AE005458_3 putative transformylase [Escherichia coli O157:H7 str. EDL933]
gi|13362613|dbj|BAB36566.1| putative transformylase [Escherichia coli O157:H7 str. Sakai]
gi|187771097|gb|EDU34941.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4196]
gi|188016114|gb|EDU54236.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4113]
gi|189002204|gb|EDU71190.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4076]
gi|189357598|gb|EDU76017.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4401]
gi|189362879|gb|EDU81298.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4486]
gi|189368338|gb|EDU86754.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4501]
gi|189372920|gb|EDU91336.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC869]
gi|189379016|gb|EDU97432.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC508]
gi|208729515|gb|EDZ79116.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4206]
gi|208735101|gb|EDZ83788.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4045]
gi|208741590|gb|EDZ89272.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4042]
gi|209160406|gb|ACI37839.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4115]
gi|209765348|gb|ACI80986.1| putative transformylase [Escherichia coli]
gi|209765350|gb|ACI80987.1| putative transformylase [Escherichia coli]
gi|209765352|gb|ACI80988.1| putative transformylase [Escherichia coli]
gi|209765354|gb|ACI80989.1| putative transformylase [Escherichia coli]
gi|209765356|gb|ACI80990.1| putative transformylase [Escherichia coli]
gi|217320255|gb|EEC28680.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|254593550|gb|ACT72911.1| bifunctional UDP-L-Ara4N formyltransferase [Escherichia coli
O157:H7 str. TW14359]
gi|290763373|gb|ADD57334.1| Bifunctional polymyxin resistance protein arnA [Includes:
UDP-4-amino- 4-deoxy-L-arabinose formyltransferase
(UDP-L-Ara4N formyltransferase) (ArnAFT)] [Escherichia
coli O55:H7 str. CB9615]
gi|320192122|gb|EFW66767.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC1212]
gi|320641084|gb|EFX10563.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. G5101]
gi|320646472|gb|EFX15391.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H- str. 493-89]
gi|320651569|gb|EFX19949.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H- str. H 2687]
gi|320663022|gb|EFX30339.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O55:H7 str. USDA
5905]
gi|320667840|gb|EFX34748.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. LSU-61]
gi|326339608|gb|EGD63419.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. 1125]
gi|326344070|gb|EGD67831.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. 1044]
Length = 660
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|123442451|ref|YP_001006430.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|134035393|sp|A1JPN5|ARNA_YERE8 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|122089412|emb|CAL12260.1| probable formyl transferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 687
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 73/321 (22%), Positives = 141/321 (43%), Gaps = 29/321 (9%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + L+ALV + + I +V+T P R S+V + A + LP
Sbjct: 1 MKAIVFAYHDIGCVGLKALVEAGYDIQAVFTHTDSPNENR----FFSSVARVAADLDLPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ D+ Y ++ IL++ G +N H SLLP++RG AP
Sbjct: 57 FAPEDVNHPLWIERIQQLQPDIIFSFYYRNMLCDDILSSAPRGGFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I ++ G+ ETG+ + +M K D GP+ KV IS + L ++ + +
Sbjct: 117 INWVLVNGETETGVTLHQMVKKADAGPIVGQHKVMISGSDTALTLHTKMRDAANELLRDL 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ K++ +LPL PQ E+ + + + + +++ +SA ++N +R P+PGA+ +
Sbjct: 177 LPKMKNASLPLEPQKESEASCFGRRTADDGAIDWQKSALAINNLVRAVTEPYPGAFSYLG 236
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGD- 296
++ + SQ ++ G V++ + +AC GA+ I+ Q +
Sbjct: 237 ----QRKLIIWRSQPLDVVHSKLAGTVLSTSPLVVACGDGALEIITGQ--------GEEG 284
Query: 297 -FLLGCPVI------IGCIVG 310
++ G + G +G
Sbjct: 285 LYVQGSRLAQEMGIVTGIRLG 305
>gi|302533356|ref|ZP_07285698.1| methionyl-tRNA formyltransferase [Streptomyces sp. C]
gi|302442251|gb|EFL14067.1| methionyl-tRNA formyltransferase [Streptomyces sp. C]
Length = 179
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 63/148 (42%), Positives = 91/148 (61%), Gaps = 3/148 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++VF GT E AV L AL++S H + +V T+P PAG RG + V S V ++A+E +
Sbjct: 1 MKLVFAGTPEVAVPALDALIASGRHEVAAVVTRPDAPAG-RGRRLVASPVAERAEEAGIE 59
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P + E++ D VVAYG +IP+ L+ + G+ N H SLLP WRGAA
Sbjct: 60 VLKPVRPRDPEFQARLREIAPDCCPVVAYGALIPKSALDIPRHGWVNLHFSLLPSWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGP 148
P+Q +IMAGD TG + ++++ LDTGP
Sbjct: 120 PVQHSIMAGDQVTGASTFRIEEGLDTGP 147
>gi|238753668|ref|ZP_04615030.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia ruckeri ATCC 29473]
gi|238708220|gb|EEQ00576.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia ruckeri ATCC 29473]
Length = 667
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 76/313 (24%), Positives = 142/313 (45%), Gaps = 21/313 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + ++ALV + + I +++T PA S+V + A E LP
Sbjct: 1 MKAIVFAYHDIGCVGIKALVEAGYDIQAIFTHTDDPAENH----FFSSVARVAAELELPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
EQ DV Y ++ ++IL+ G +N H SLLPR+RG AP
Sbjct: 57 FAPEDVNHPLWVEQIRELQPDVIFSFYYRNLLDEQILSIAPQGAFNLHGSLLPRYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I ++ G+ ETG+ + +M K D G + +V IS + L ++ + +
Sbjct: 117 INWVLVNGETETGVTLHQMVKRPDAGGIVGQCRVAISDSDTALSLHGKMRDAAQTLLRDL 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ K++ LPL PQ+E +Y + + + +++ +SA +HN +R P+PGA+ +
Sbjct: 177 LPKMKNEALPLIPQVEADASYFGRRTAADGEISWLKSAAELHNLVRAVTEPYPGAFTHLG 236
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ + ++ ++ PG V++ + IAC GA+ I+ Q D G +
Sbjct: 237 ----QRKLIVWRARPLDCNHNKIPGTVLSAHPLVIACGDGALEIISGQS------DAGLY 286
Query: 298 LLGCPVII--GCI 308
+ G + G +
Sbjct: 287 MQGHRLAAEMGMV 299
>gi|319760356|ref|YP_004124294.1| methionyl-tRNA formyltransferase [Candidatus Blochmannia vafer str.
BVAF]
gi|318039070|gb|ADV33620.1| methionyl-tRNA formyltransferase [Candidatus Blochmannia vafer str.
BVAF]
Length = 344
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 93/333 (27%), Positives = 162/333 (48%), Gaps = 38/333 (11%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+VF GT EFA L L++ S+H+I++++TQ P+ ++ +++ + ++LP
Sbjct: 9 LRIVFFGTGEFAAYHLYTLINCSAHTIIAIFTQEPQILNKKTQHYF--SIYHIIRTYNLP 66
Query: 62 ALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L + Q + D+ +VV+YGL++ + IL+ KLG N H SLLPRWRG A
Sbjct: 67 LFQSNTLSMFQILQIIKHRNIDIIIVVSYGLILSKEILSIPKLGCINVHGSLLPRWRGPA 126
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PIQRA+ GD TGI+I+++D +DTG + + + I + L ++L+ + + A+++
Sbjct: 127 PIQRALEHGDIITGISIIQIDSGIDTGNILYTQSCKILPKETSYSLCKKLAYIGSVALLQ 186
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
M + PQ TYA K+SK E R+N+ SAE + IRA +P+P ++ ++
Sbjct: 187 TMHHITMGTCKNIPQNPLYATYAPKVSKLEARINWKNSAEELERRIRAFNPWPISYFQLK 246
Query: 241 IGNKHERIKLLESQLVEGEG---------------------------KPGEVIN---PNF 270
+RIK+ +++ PG ++
Sbjct: 247 T----KRIKVWGAEINNNSSITTTKPHPSHPFHSLLRNDNLHSYSFLTPGTILKINSKGI 302
Query: 271 TIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPV 303
+A G + + LQ G + + L +
Sbjct: 303 YVATGNGTIILTILQIPGKKKTPVKCLLNSYSL 335
>gi|332161625|ref|YP_004298202.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318605883|emb|CBY27381.1| polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase; Polymyxin resistance protein ArnA_FT,
UDP-4-amino-4-deoxy-L-arabinose formylase [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325665855|gb|ADZ42499.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 677
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 76/321 (23%), Positives = 144/321 (44%), Gaps = 29/321 (9%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + A L+ALV + + I +V+T P R S+V + A + LP
Sbjct: 1 MKAIVFAYHDIGCAGLKALVEAGYDIQAVFTHTDSPNENR----FFSSVARVAADLDLPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ D+ Y ++ IL++ G +N H SLLP++RG AP
Sbjct: 57 FAPEDVNHPLWIERIQQLQPDIIFSFYYRNMLCDDILSSAPRGGFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G+ ETG+ + +M K D GPV KV IS + L ++ + +
Sbjct: 117 INWALVNGETETGVTLHQMVKKADAGPVVGQHKVMISGSDTALTLHAKMRDAANELLRDL 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ K++ +LPL PQ E+ +Y + + + +++ +SA ++N +R P+PGA+ +
Sbjct: 177 LPKMKNASLPLEPQKESEASYFGRRTADDGAIDWQKSALAINNLVRAVTEPYPGAFSYLG 236
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGD- 296
++ + S+ ++ G V++ + +AC GA+ I+ Q +
Sbjct: 237 ----QRKLIIWRSRPLDVVHSKLAGTVLSTSPLVVACGDGALEIITGQ--------GEEG 284
Query: 297 -FLLGCPVI------IGCIVG 310
++ G + G +G
Sbjct: 285 LYVQGSRLAQEMGIVTGIRLG 305
>gi|254882162|ref|ZP_05254872.1| formyl transferase N-terminal domain-containing protein
[Bacteroides sp. 4_3_47FAA]
gi|254834955|gb|EET15264.1| formyl transferase N-terminal domain-containing protein
[Bacteroides sp. 4_3_47FAA]
Length = 215
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 64/191 (33%), Positives = 95/191 (49%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+V+MGT +FAV +L+ LV +++V V T P +P GR G S V + A L
Sbjct: 6 LRIVYMGTPDFAVESLKRLVEGGYNVVGVITMPDKPMGRHGSVLQPSPVKEYAVSQGLRI 65
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L P KL E + + L +V ++P+ + N +LG +N HASLLP++RGAAPI
Sbjct: 66 LQPEKLKDEAFIEELRSLQADLQIVVAFRMLPEIVWNMPRLGTFNLHASLLPQYRGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ GD ETGI + +DTG + +VPI+ N + +L L
Sbjct: 126 NWAVINGDTETGITTFFLKHEIDTGEIIQQVRVPIADTDNVEIVHDKLMYLGGGFGFGNR 185
Query: 183 DKLEQNNLPLS 193
+
Sbjct: 186 GCYFEWKCETC 196
>gi|283832310|ref|ZP_06352051.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Citrobacter youngae ATCC 29220]
gi|291071955|gb|EFE10064.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Citrobacter youngae ATCC 29220]
Length = 660
Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 70/312 (22%), Positives = 140/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QAL+ + + I +++T P G K+ +V + A +P
Sbjct: 1 MKAVVFAYHDMGCQGVQALLDAGYEIAAIFTHTDTP----GEKAFFGSVSRLAASAGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + +S DV Y ++ + IL+ G +N H SLLP++RG AP
Sbjct: 57 YAPDDVNHPLWIERISQLAPDVIFSFYYRHLLSEEILSLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++V IS + L +L + +A
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIIAQQRVAISPDDVALTLHHKLCQAARQLLEQA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ + PQ E T + + ++ +++ + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKTEDYAERPQQEADATCFGRRTPEDSFLDWNKPAAELHNQVRAVSDPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ + S++ + +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 T----QKFTVWSSRVCTNDLAAQPGTVISVAPLLIACIDGALEIITGQAGDGIAMQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G +
Sbjct: 293 AQVLGLVPGSRL 304
>gi|311277580|ref|YP_003939811.1| NAD-dependent epimerase/dehydratase [Enterobacter cloacae SCF1]
gi|308746775|gb|ADO46527.1| NAD-dependent epimerase/dehydratase [Enterobacter cloacae SCF1]
Length = 660
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 68/310 (21%), Positives = 131/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QAL+ + + I +++T P G +V + A E +
Sbjct: 1 MKAVVFAYHDMGCTGIQALLDAGYDIAAIFTHPD----NSGENHFFGSVARLAAEQGITV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ + DV Y ++ +L+ + G +N H SLLP++RG AP
Sbjct: 57 YAPEDVNHPLWVDRIRAMAPDVIFSFYYRNLLSDDVLSTARHGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M D G + V I N L ++L + +A
Sbjct: 117 LNWVLVNGEKETGVTLHRMVNRADAGNIVAQEVVAIDDNDVAMTLHRKLCAAAQTVLRDA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + + Q ++ TY + + + R+ + +SAE +HN +R P+PGA+ +
Sbjct: 177 LPAIRDGKTKETAQDDSQATYVGRRTPEDGRLEWEKSAEQLHNLVRAVSDPWPGAFGFVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ L KPG V++ TIAC +GA+ I+ Q G +
Sbjct: 237 TNKFIVWKSRVRHDLA--AAKPGTVLSVAPLTIACGKGALEIVTGQSENGVYMQGAQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G ++
Sbjct: 295 ALGLVGGALL 304
>gi|225453106|ref|XP_002270626.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 365
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 80/331 (24%), Positives = 147/331 (44%), Gaps = 31/331 (9%)
Query: 5 VVFMGTSEFAVATLQALVSSS------HSIVSVYTQPPRPAGR-RGLKSVLSAVHKKAQE 57
+VF+G+ + + A L L ++S + ++ TQP P+GR RG K + S V + A +
Sbjct: 36 LVFLGSPQVSAAVLDDLFNASTAPDSMFEVAAIVTQP--PSGRNRGRKVMPSPVAQHALD 93
Query: 58 FSLP----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P + + ++ + AYG ++P++ L +G N H SLL
Sbjct: 94 RGFPSDLIFTPEKAGEEIFLSSLRALQPELCITAAYGNILPRKFLEIPPMGTVNIHPSLL 153
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
P +RGAAP+QRA+ G ETG+++ + LD GPV + + I L L
Sbjct: 154 PLYRGAAPVQRALQDGVKETGVSLAFTVRALDAGPVIACERFEVDDQIKATDLLALLFSQ 213
Query: 174 CAHAMVEAMDKLEQN--NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
+ ++ + + NL PQ ++ T A KI+ E+ ++F + A +HN +RA +
Sbjct: 214 GSKLLIHELPSIFDGSANLKAQPQDDSKATLAPKITPEESWLSFDQEASVLHNKVRAFAG 273
Query: 232 FPGAWLEMMIGNKHE-RIKLLESQLVE-----------GEGKPGEVINPNFTIAC-SQGA 278
+PG ++++ + +L+ +++ E I C A
Sbjct: 274 WPGTRAKVVVIDDKNGEHNVLDLKIITTRVCGQSNIQVNEADDVRFIKDALVFPCSGSSA 333
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ ++ +Q G +V++ F G G +
Sbjct: 334 LEVLEVQLPGKKVVNAAAFWNGLR---GQRL 361
>gi|296087189|emb|CBI33563.3| unnamed protein product [Vitis vinifera]
Length = 392
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 80/331 (24%), Positives = 147/331 (44%), Gaps = 31/331 (9%)
Query: 5 VVFMGTSEFAVATLQALVSSS------HSIVSVYTQPPRPAGR-RGLKSVLSAVHKKAQE 57
+VF+G+ + + A L L ++S + ++ TQP P+GR RG K + S V + A +
Sbjct: 63 LVFLGSPQVSAAVLDDLFNASTAPDSMFEVAAIVTQP--PSGRNRGRKVMPSPVAQHALD 120
Query: 58 FSLP----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P + + ++ + AYG ++P++ L +G N H SLL
Sbjct: 121 RGFPSDLIFTPEKAGEEIFLSSLRALQPELCITAAYGNILPRKFLEIPPMGTVNIHPSLL 180
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
P +RGAAP+QRA+ G ETG+++ + LD GPV + + I L L
Sbjct: 181 PLYRGAAPVQRALQDGVKETGVSLAFTVRALDAGPVIACERFEVDDQIKATDLLALLFSQ 240
Query: 174 CAHAMVEAMDKLEQN--NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
+ ++ + + NL PQ ++ T A KI+ E+ ++F + A +HN +RA +
Sbjct: 241 GSKLLIHELPSIFDGSANLKAQPQDDSKATLAPKITPEESWLSFDQEASVLHNKVRAFAG 300
Query: 232 FPGAWLEMMIGNKHE-RIKLLESQLVE-----------GEGKPGEVINPNFTIAC-SQGA 278
+PG ++++ + +L+ +++ E I C A
Sbjct: 301 WPGTRAKVVVIDDKNGEHNVLDLKIITTRVCGQSNIQVNEADDVRFIKDALVFPCSGSSA 360
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ ++ +Q G +V++ F G G +
Sbjct: 361 LEVLEVQLPGKKVVNAAAFWNGLR---GQRL 388
>gi|33863044|ref|NP_894604.1| putative methionyl-tRNA formyltransferase [Prochlorococcus marinus
str. MIT 9313]
gi|39931226|sp|Q7V7H4|FMT_PROMM RecName: Full=Methionyl-tRNA formyltransferase
gi|33634961|emb|CAE20947.1| putative methionyl-tRNA formyltransferase [Prochlorococcus marinus
str. MIT 9313]
Length = 342
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 92/337 (27%), Positives = 152/337 (45%), Gaps = 33/337 (9%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
+F GT +AV TL AL S + IV V +QP R G RG + + S V ++A + L P
Sbjct: 2 LFWGTPSYAVPTLDALNDSGYEIVGVVSQPDRRRG-RGNQQMASPVKQRAMDQGLRLFTP 60
Query: 66 TKLGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
++ E Q S AD++VVVA+G ++P +LN LG +NGHASLLPRWRGA PIQ
Sbjct: 61 ERIRDEGDIQAELKSLKADISVVVAFGQLLPSTVLNQPPLGCWNGHASLLPRWRGAGPIQ 120
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
++++GD+ TG+ IM M++ LDTGPV +V I N L LS + A +E+M
Sbjct: 121 WSLLSGDSVTGVGIMAMEEGLDTGPVLVQERVAIGLLENANQLSNRLSSITAKLFLESMP 180
Query: 184 KL----EQNNLPLSPQIENGITYAEKISKGETRVNFCRSA--ENVHNHIRALSPFPGAWL 237
++ Q+E + R+ + + + + G +
Sbjct: 181 RIAAAGPGIESERWKQLEVIKQEEIEGDPTYARMLSKKDHILDWNQSAMDLHRRVMGLYP 240
Query: 238 EMMIGNKHERIKLLESQLV--------------------EGEGKPGEVI----NPNFTIA 273
++R+K+ ++ + +GE +PG+++ + ++
Sbjct: 241 NAFSSWNNKRLKVQATEPLDEELKSKLSEEVRPLLGRWQDGEHEPGKILACESDLGLVVS 300
Query: 274 CSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ I + Q G + +G +G
Sbjct: 301 TKTCPLLIRQGQLEGKSKALGEVLIQQLQATVGQGLG 337
>gi|222034015|emb|CAP76756.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
LF82]
Length = 660
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 69/310 (22%), Positives = 135/310 (43%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+S+ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLSAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPRGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + +SA +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKSASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
L + +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTV--WLSRVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQTGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|313678776|ref|YP_004056516.1| Methionyl-tRNA formyltransferase [Mycoplasma bovis PG45]
gi|312950771|gb|ADR25366.1| Methionyl-tRNA formyltransferase [Mycoplasma bovis PG45]
Length = 279
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 69/291 (23%), Positives = 145/291 (49%), Gaps = 15/291 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++ GT EFAV + ++++ +V + +QP +P +RG + AQ++++
Sbjct: 1 MKILLAGTPEFAVPIFEKIINN-FEVVGIVSQPDKP-NKRGRILTSTPTKVLAQKYNIKC 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + ++ + + D V A+G +IP +L K N H S+LP++RGAAP+
Sbjct: 59 F-QPEKIGQIADELKALDYDYLVTAAFGQLIPTSVLQIAKKLNLNVHGSILPKYRGAAPV 117
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q A++ D TG+++M++ K +D G V + I + L ++S+L A +V+ +
Sbjct: 118 QHALLNNDKTTGVSLMEIVKAMDAGDVFAKIEFEIDERDTASSLLCKISLLSAEKIVDWL 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+K+++ L Q E+ +T++ K++K + + + + N IRA PGA++ +
Sbjct: 178 NKIDKGELAREVQDESKVTFSPKLNKEDAEITKDLTCDEAINKIRAYEYNPGAYIHI--- 234
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLD 293
+R+KL + +V+ I + G++ + Q + +
Sbjct: 235 -NDKRVKLFFATK--------KVVKAGLKIDQADGSIYAVDYQFDSKKRVK 276
>gi|215487472|ref|YP_002329903.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O127:H6 str.
E2348/69]
gi|312967557|ref|ZP_07781772.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
2362-75]
gi|254806284|sp|B7UFR7|ARNA_ECO27 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|215265544|emb|CAS09947.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli O127:H6 str. E2348/69]
gi|312287754|gb|EFR15659.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
2362-75]
Length = 660
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPRGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQTGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|239945919|ref|ZP_04697856.1| putative formyltransferase [Streptomyces roseosporus NRRL 15998]
gi|239992390|ref|ZP_04713054.1| putative formyltransferase [Streptomyces roseosporus NRRL 11379]
gi|291449375|ref|ZP_06588765.1| methionyl-tRNA formyltransferase [Streptomyces roseosporus NRRL
15998]
gi|291352322|gb|EFE79226.1| methionyl-tRNA formyltransferase [Streptomyces roseosporus NRRL
15998]
Length = 314
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 78/309 (25%), Positives = 135/309 (43%), Gaps = 19/309 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TLQAL+ S H +V+V T P + K +V A++ +P
Sbjct: 1 MRVVMFGYQTWGHRTLQALLDSEHDVVTVVTHP--RSEHAYEKIWSDSVADLAEKHDVPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
++ + E +Q D+ V + +P I G N H SLLP + G +P+
Sbjct: 59 IIRNRPDDELVDQLSEVAPDIIVANNWRTWMPPEIFTLPVHGTLNIHDSLLPAYAGFSPL 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ E G+ MD+ LD G + R VP+ L L A VEA+
Sbjct: 119 IWALINGEPEVGVTAHMMDEELDAGDIVVQRAVPVGPTDTATDLFHRTVDLIAPVTVEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS-PFPGAWLEMMI 241
+ +PQ + ++ K ++ + R+++ AE++ +RA S P+P A+
Sbjct: 179 GLIASGQREFTPQDRSKASFFHKRAEEDIRIDWNWPAEDLERLVRAQSAPYPAAFT---- 234
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAGG 289
++ RI+++ + + EG G PG V I A + + R++ G
Sbjct: 235 YHRGRRIEVVSAVVSEGRYGGTPGRVFYREGDGVVIVAGADARTGRNRGLAVTRVRTEDG 294
Query: 290 RVLDIGDFL 298
R L ++
Sbjct: 295 RELPATEYF 303
>gi|331663770|ref|ZP_08364680.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TA143]
gi|284922246|emb|CBG35330.1| bifunctional polymyxin resistance protein [includes:
UDP-4-amino-4-deoxy-l-arabinose formyltransferase;
UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating] [Escherichia coli 042]
gi|331059569|gb|EGI31546.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TA143]
Length = 660
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 67/312 (21%), Positives = 139/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPTIKHGNILEIAQRENEATCFGRRTPEDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+++ + S++ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 ----NQKFTVWSSRVHSHAPAAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G +
Sbjct: 293 AQTLGLVQGSRL 304
>gi|66361188|pdb|1YRW|A Chain A, Crystal Structure Of E.Coli Arna Transformylase Domain
Length = 302
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 65/286 (22%), Positives = 127/286 (44%), Gaps = 9/286 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQ 285
+ +PG VI+ IAC GA+ I+ Q
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQ 280
>gi|82544737|ref|YP_408684.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella boydii Sb227]
gi|123728361|sp|Q31YK2|ARNA_SHIBS RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|81246148|gb|ABB66856.1| putative transformylase [Shigella boydii Sb227]
gi|332093622|gb|EGI98680.1| bifunctional polymyxin resistance protein arnA [Shigella boydii
3594-74]
Length = 660
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVAHLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHATRQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISIAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|325496709|gb|EGC94568.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia fergusonii ECD227]
Length = 660
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 70/312 (22%), Positives = 136/312 (43%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QAL+ + + I +++T PA K +V + A +P
Sbjct: 1 MKAVVFAYHDMGCLGVQALLDAGYEISAIFTHADNPAE----KVFYGSVSRLAALAGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ DV Y ++ IL G +N H SLLP++RG AP
Sbjct: 57 YAPDDINHPLWVERIAQLAPDVIFSFYYRNLLNNEILKLAPHGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ + G+NETG+ + +M D G + ++V I L ++L + + A
Sbjct: 117 LNWVLENGENETGVTLHRMVAKADAGAIIAQQRVAIDPEDAALTLHKKLCQSASQMLEYA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++Q + Q E+ TY + ++ +++ + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKQGQTQETAQNESEATYFGRRKPEDSFLDWNKPATVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ + S++ +PG VI+ F IAC GA+ I+ Q G +
Sbjct: 237 T----QKFTIWSSRVHPRVNAAQPGSVISVAPFLIACGDGALEIITGQSVDGITMQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G +
Sbjct: 293 AQTLGLVEGSRL 304
>gi|33565036|emb|CAE39985.1| methionyl-tRNA formyltransferase [Bordetella parapertussis]
Length = 287
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 108/285 (37%), Positives = 148/285 (51%), Gaps = 13/285 (4%)
Query: 30 SVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLS---------FN 80
V TQP RPAG RGLK S V + A + P L + +
Sbjct: 3 LVLTQPDRPAG-RGLKLTPSPVKQAALAAGIGVAQPRSLRLDGRYPDEAAAARAQLERVA 61
Query: 81 ADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKM 140
DV VV AYGL++PQ L+ +LG N HASLLPRWRGAAPIQRAI AGD ETG+ IM+M
Sbjct: 62 PDVMVVAAYGLILPQWTLDLPRLGCLNIHASLLPRWRGAAPIQRAIEAGDAETGVTIMQM 121
Query: 141 DKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGI 200
D LDTG + R VPI + A L EL++ A+V+A+ L Q L Q + G+
Sbjct: 122 DAGLDTGDMLLERAVPIGAQQTAAQLHDELALAGGQAIVDALAALGQGGLAPRRQPDAGV 181
Query: 201 TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEG 260
TYA K+ K E ++ A + +RA +P PGA + + + ++ ++ G
Sbjct: 182 TYAAKLDKAEAALDCSLPAAVLARRVRAFNPVPGATIRLPGLDDPVKVWRAQALEQAAGG 241
Query: 261 KPGEVINP---NFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
PG V+ IA QG +R++ LQ+AGG+ + F+ G
Sbjct: 242 PPGAVLRADAQGIDIATGQGVLRLLELQKAGGKRQPVDVFVRGWQ 286
>gi|330954155|gb|EGH54415.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae Cit 7]
Length = 664
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 73/314 (23%), Positives = 128/314 (40%), Gaps = 11/314 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+++ V + LQAL+ + + I +V+T P K+ +V + +
Sbjct: 1 MSIKAVVFAYHDIGCVGLQALLDAGYEIAAVFTHADDPRE----KTFFGSVAQMCARHGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
E+ D Y ++ +L K N H SLLPR+RG
Sbjct: 57 TVHAPEDPNHPLWVERIGKLAPDFIFSFYYRQLLGDSLLACAKKAALNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G+NETG+ + +M K D GP+ ++V IS+ L +L A +
Sbjct: 117 APANWVLVNGENETGVTLHQMVKRADAGPIVAQQRVSISATDTALTLHGKLRDAAADLLC 176
Query: 180 EAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWL 237
E + L P + Q E+ TY + + + +++ A ++N IR P+PGA+
Sbjct: 177 ETLPLLAAEGQLPATLQDESRATYFGRRTPADGLIDWSLPATQLYNLIRAVTQPYPGAFC 236
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQR-AGGRVLDIG 295
+ + ++ PG VI+ + IAC +G++ I QR G L
Sbjct: 237 PVGENK--LIVWAANAEAGNNGEAPGTVISHDPLRIACGEGSLIITAGQRGDSGLYLSGA 294
Query: 296 DFLLGCPVIIGCIV 309
++ G +
Sbjct: 295 QLAREFGLVAGSQL 308
>gi|281357447|ref|ZP_06243935.1| NAD-dependent epimerase/dehydratase [Victivallis vadensis ATCC
BAA-548]
gi|281316050|gb|EFB00076.1| NAD-dependent epimerase/dehydratase [Victivallis vadensis ATCC
BAA-548]
Length = 664
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 72/313 (23%), Positives = 125/313 (39%), Gaps = 13/313 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + A ++AL+ + I +++T P G +V + A E +P
Sbjct: 1 MKCVVLAYHNVGRAGIEALIRNGFEISAIFTHRDNP----GENIWFGSVAELAGELGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ + D + ++ +L+ +LG N H SLLP++RG P
Sbjct: 57 FAPEDINHPVWVGRIRAMAPDFIFSFYFRDMVKGDLLSIPRLGALNLHGSLLPKYRGRVP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ ETG+ + M D G + K I + L + +
Sbjct: 117 INWAIINGETETGVTLHYMTAKPDAGDIVDQEKFAIGDDDTARTLFDKAVTAAGILLDRT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ L+ P +PQ E TY + ++++ +SA+ V N IR P+PGA+ +
Sbjct: 177 LPLLKSGKAPRTPQDEAEATYFGGRKPADGQIDWTKSAKEVRNLIRAVTRPYPGAFSFIG 236
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+VE PG V+ FT+AC +GAVR+ Q GG +
Sbjct: 237 DRKCFF----WSVDVVEASRKAAPGTVLRAKPFTVACGEGAVRVKTAQLDGGVFMTGDQL 292
Query: 298 LLGCPVIIGCIVG 310
++ + G
Sbjct: 293 AADARIVENMVWG 305
>gi|323188016|gb|EFZ73311.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
RN587/1]
Length = 660
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQTGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|312879140|ref|ZP_07738940.1| formyl transferase domain protein [Aminomonas paucivorans DSM
12260]
gi|310782431|gb|EFQ22829.1| formyl transferase domain protein [Aminomonas paucivorans DSM
12260]
Length = 306
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 67/313 (21%), Positives = 118/313 (37%), Gaps = 19/313 (6%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
RV+ G SE A L+AL+ ++V ++T P R + + V + A +P
Sbjct: 5 RVLVCGYSEVGTACLEALLDLGANVVGLFTHRDDPKENRWFR-TPAPVAEAA---GIPVS 60
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+ S D+ + Y ++ +L LG YN H SLLPR+RG PI
Sbjct: 61 TESLASPGGIALARSLRPDLLLSFYYRDLLGADLLALPPLGAYNLHGSLLPRYRGRVPIH 120
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
A++ G+ TG + M D G + VPI + + + ++ + +
Sbjct: 121 WAVIRGETRTGATLHVMTPRPDGGDLIDQESVPILFEDTSLEVFRRVTDAAVRVVRRSYP 180
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFC-RSAENVHNHIRALSPFPGAWLEMMIG 242
L Q P +PQ E T + + + R+++ + H P+PGA+ +
Sbjct: 181 LLAQGRAPRTPQDEARATTFGRRTPADGRLDWTGDALGLYHLVRAVTRPYPGAFAFLGNR 240
Query: 243 NKHERIKLLESQLVEGEGKPGEVINP---NFTIACSQGAVRIMRLQRAGGR---VLDIGD 296
+ + PG + C GA+R++ +Q G R +
Sbjct: 241 KLFVWKAWPLPEAGQPSVPPGTCFEDPEGGLRVRCGSGALRLLEVQEEGAREDEAMPG-- 298
Query: 297 FLLGCPVIIGCIV 309
+ G +
Sbjct: 299 ------LTPGARL 305
>gi|300936818|ref|ZP_07151709.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 21-1]
gi|300458061|gb|EFK21554.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 21-1]
Length = 660
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 67/312 (21%), Positives = 140/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I +IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLIHDKILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPEDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+++ + S++ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 ----NQKFTVWSSRVHSHAPAAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G +
Sbjct: 293 AQTLGLVQGSRL 304
>gi|218705788|ref|YP_002413307.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli UMN026]
gi|293405723|ref|ZP_06649715.1| polymyxin resistance protein ArnA_DH [Escherichia coli FVEC1412]
gi|298381406|ref|ZP_06991005.1| polymyxin resistance protein ArnA_DH [Escherichia coli FVEC1302]
gi|300896929|ref|ZP_07115412.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 198-1]
gi|226723713|sp|B7N5M0|ARNA_ECOLU RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|218432885|emb|CAR13779.1| fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase
[Escherichia coli UMN026]
gi|291427931|gb|EFF00958.1| polymyxin resistance protein ArnA_DH [Escherichia coli FVEC1412]
gi|298278848|gb|EFI20362.1| polymyxin resistance protein ArnA_DH [Escherichia coli FVEC1302]
gi|300359240|gb|EFJ75110.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 198-1]
Length = 660
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 67/312 (21%), Positives = 139/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPEDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+++ + S++ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 ----NQKFTVWSSRVHSHAPAAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G +
Sbjct: 293 AQTLGLVQGSRL 304
>gi|281179345|dbj|BAI55675.1| putative formyltransferase [Escherichia coli SE15]
Length = 660
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 70/312 (22%), Positives = 139/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+S+ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLSAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPRGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGK--PGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+++ + S++ K PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 ----NQKFTVWSSRVHPHASKALPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G +
Sbjct: 293 AQTLGLVQGSRL 304
>gi|157161741|ref|YP_001459059.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli HS]
gi|166988214|sp|A8A2C2|ARNA_ECOHS RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|157067421|gb|ABV06676.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli HS]
Length = 660
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVAHLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISIAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|318041668|ref|ZP_07973624.1| methionyl-tRNA formyltransferase [Synechococcus sp. CB0101]
Length = 345
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 70/156 (44%), Positives = 97/156 (62%), Gaps = 3/156 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT +AVA+L ALV++ H +V V +QP R G RG + S V +A E +P
Sbjct: 1 MKILFWGTPAYAVASLDALVAAGHELVGVVSQPDRRRG-RGKALMPSPVKARALELGIPV 59
Query: 63 LVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P ++ +E Q ADV VVVA+G ++P IL LG +NGH SLLPRWRGA
Sbjct: 60 FTPERIRREPECQRQLADLGADVYVVVAFGQILPLEILQQPPLGCWNGHGSLLPRWRGAG 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
PIQ +++ GD TG+ IM M++ LDTGPV R +P
Sbjct: 120 PIQWSLLEGDATTGVGIMAMEEGLDTGPVLLERSLP 155
>gi|193068155|ref|ZP_03049119.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli E110019]
gi|192958434|gb|EDV88873.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli E110019]
Length = 660
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVAHLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISIAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|145588826|ref|YP_001155423.1| methionyl-tRNA formyltransferase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145047232|gb|ABP33859.1| Methionyl-tRNA formyltransferase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 310
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 79/316 (25%), Positives = 134/316 (42%), Gaps = 17/316 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAV-HKKAQEFSL- 60
+RV +G+++F A L+A + +V+V+ P P KS V + A L
Sbjct: 1 MRVALIGSADFGKAALEAFLDRGDEVVAVFCPPDNP------KSSKPEVLKEAALARGLT 54
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + G E + + NAD+ V+ +PQ ++ K G H SLLP++RG +
Sbjct: 55 PLQFASLKGPEAAQAMIDSNADICVMAYVLQFVPQELVKIPKHGTIQYHPSLLPKYRGPS 114
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNIN-TAGLQQELSVLCAHAMV 179
I AI G+ +TG+ I + LD G V ++VPI N L + A++
Sbjct: 115 AINWAIALGEEKTGLTIFRPSDGLDEGEVILQKEVPIGPNDTLGKIYFDHLFPVGIKALM 174
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
EA D + Q E+ Y ++++ ++N IRA +P PGAW +
Sbjct: 175 EAADLVVAGQHQEVVQDESKANYEGWFDANAAQIHWATHISQIYNLIRACNPAPGAWTKF 234
Query: 240 MIGNKHE--RIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQ-RAGGRVLD 293
K + + +GKPGEV +F + C G + +++ + AG +
Sbjct: 235 GEQKIQIYDCHKHVAATFASVKGKPGEVTQITLDSFFVTCHGGQIEVLKAKGAAGK--VT 292
Query: 294 IGDFLLGCPVIIGCIV 309
+ + +G
Sbjct: 293 GAELAKELNIEVGQSF 308
>gi|323977544|gb|EGB72630.1| NAD dependent epimerase/dehydratase [Escherichia coli TW10509]
Length = 660
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 66/312 (21%), Positives = 134/312 (42%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHSDNPCE----KAFYGSVARLAAERGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQMSPEVIFSFYYRHLIHDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPEDSFLEWHKPAAVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+++ + S++ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 ----NQKFTVWSSRVHSHAPAAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G +
Sbjct: 293 AQSLGLVQGSRL 304
>gi|34556929|ref|NP_906744.1| methionyl-tRNA formyltransferase [Wolinella succinogenes DSM 1740]
gi|39931192|sp|Q7MA26|FMT_WOLSU RecName: Full=Methionyl-tRNA formyltransferase
gi|34482644|emb|CAE09644.1| METHIONYL-TRNA FORMYLTRANSFERASE [Wolinella succinogenes]
Length = 305
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 78/310 (25%), Positives = 134/310 (43%), Gaps = 10/310 (3%)
Query: 3 LRVVFMGTSEFAVATLQAL-VSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+RV+FMGT +A L+AL S +V V +QP +P GRR + V +
Sbjct: 2 IRVLFMGTPAYAKTILEALWFSEEVEVVGVVSQPDKPVGRR-QELTPPPVKESCLRLAPH 60
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P L +E + + +VVA I + N HAS+LP +RGA
Sbjct: 61 TPLFQPENLKEERWAKEWRALEPDFIVVAAYGKILP-KVILDIAPCINLHASILPLYRGA 119
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+PI ++ GD +G++ M+M++ LD G V V I + L +EL+ A +
Sbjct: 120 SPIHESLRRGDAWSGVSAMRMEEGLDCGEVLGCSFVEIKEEWGVSRLFEELANRAAALTL 179
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + + PQ+ +Y KI K E V F + E + + + +
Sbjct: 180 KVLK--RFSEIRPLPQVGADSSYCRKIRKEEGLVGFVNAKELYD---QFRAYKVWPGIFL 234
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
K + I LL G+ + + C +G++RI+ +Q + +D ++
Sbjct: 235 RSELKLKEITLLSETGEHHMGEILAINKEGVVVGCKEGSLRILMVQAPSKKEVDAVSYVN 294
Query: 300 GCPVIIGCIV 309
G + +G I+
Sbjct: 295 GKRLGVGDIL 304
>gi|206580101|ref|YP_002236150.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae 342]
gi|288933140|ref|YP_003437199.1| NAD-dependent epimerase/dehydratase [Klebsiella variicola At-22]
gi|290511942|ref|ZP_06551310.1| UDP-GlcUA decarboxylase/UDP-L-Ara4N formyltransferase [Klebsiella
sp. 1_1_55]
gi|226723718|sp|B5XTK9|ARNA_KLEP3 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|206569159|gb|ACI10935.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae 342]
gi|288887869|gb|ADC56187.1| NAD-dependent epimerase/dehydratase [Klebsiella variicola At-22]
gi|289775732|gb|EFD83732.1| UDP-GlcUA decarboxylase/UDP-L-Ara4N formyltransferase [Klebsiella
sp. 1_1_55]
Length = 661
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 69/312 (22%), Positives = 134/312 (42%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +Q+L+ + + I +++T P P G +V + A E +P
Sbjct: 1 MKAVVFAYHDMGCTGIQSLLDAGYDIAAIFTHPDNP----GENHFFGSVARLAAEQGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ DV Y ++ ILN G +N H SLLP++RG AP
Sbjct: 57 WAPEDVNHPLWIERIREMKPDVLFSFYYRNLLGDEILNLAPKGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M D G + + V I + L ++L + +A
Sbjct: 117 LNWVLVNGESETGVTLHRMVNRADAGDIVAQQTVAIGPDDAALTLHRKLCAAATELLGQA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + + PQ + TY + + + R+++ + A+ +HN +R P+PGA+
Sbjct: 177 LPAILEGKTAERPQDHSQATYVGRRTPEDGRLDWEQPAQTLHNLVRAVSDPWPGAFGYAG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + +S++ KPG VI+ +AC GA+ I+ Q G +
Sbjct: 237 AN----KFIVWKSRVRHDLPAAKPGTVISVAPLIVACQDGALEIVTGQTERGVYMQGAQL 292
Query: 298 LLGCPVIIGCIV 309
++ G ++
Sbjct: 293 AQALGLVSGAVI 304
>gi|331673768|ref|ZP_08374531.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TA280]
gi|331069041|gb|EGI40433.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TA280]
Length = 660
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 68/312 (21%), Positives = 139/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+S+ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLSAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPEDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+++ + S++ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 ----NQKFTVWSSRVHSHAPAAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G +
Sbjct: 293 AQTLGLVQGSRL 304
>gi|74312777|ref|YP_311196.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella sonnei Ss046]
gi|123759587|sp|Q3YZV1|ARNA_SHISS RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|73856254|gb|AAZ88961.1| putative transformylase [Shigella sonnei Ss046]
gi|323168579|gb|EFZ54259.1| bifunctional polymyxin resistance protein arnA [Shigella sonnei
53G]
Length = 660
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T PA K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPAE----KAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGHRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 MLGLVQGSRL 304
>gi|312946876|gb|ADR27703.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O83:H1 str. NRG
857C]
Length = 660
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 68/310 (21%), Positives = 134/310 (43%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+S+ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLSAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPRGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + +SA +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKSASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQTGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|291320616|ref|YP_003515881.1| methionyl tRNA formyltransferase [Mycoplasma agalactiae]
gi|290752952|emb|CBH40927.1| Methionyl tRNA formyltransferase [Mycoplasma agalactiae]
Length = 279
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 73/292 (25%), Positives = 147/292 (50%), Gaps = 15/292 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++ GT EFAV + ++++ ++V + +QP +P +RG + AQ++++
Sbjct: 1 MKILLAGTPEFAVPIFEKIINN-FTVVGIVSQPDKP-NQRGRVLTSTPTKALAQKYNIKC 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + ++ + + D V A+G +IP +L K N H SLLP++RGAAP+
Sbjct: 59 F-QPEKIGQIADELRALDYDYLVTAAFGQLIPTSVLQIAKKLNLNVHGSLLPKYRGAAPV 117
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q A++ D TG+++M+M K +D G V + I + L +++S+L A +VE +
Sbjct: 118 QHALLNNDKTTGVSLMEMVKAMDAGDVFAKIEFEIEETDVASSLLKKISLLTADNIVEWL 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+K+++ L Q E+ +T++ K++K + + + + + IRA PGA++ +
Sbjct: 178 NKIDKGELAREVQDESKVTFSPKLNKDDAEITKDLTCDQAISKIRAYEYNPGAFVYINS- 236
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+R+KL + +V+ I S G + + Q + + I
Sbjct: 237 ---KRVKLFFAIK--------KVVKAGIKIELSDGVIYAVDYQFDSKKRVKI 277
>gi|332098976|gb|EGJ03926.1| bifunctional polymyxin resistance protein arnA domain protein
[Shigella dysenteriae 155-74]
Length = 346
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVAHLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 MLGLVQGSRL 304
>gi|331653697|ref|ZP_08354698.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli M718]
gi|331048546|gb|EGI20622.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli M718]
Length = 660
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 131/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+S+ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLSAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPEDSFLEWHKPAAVLHNMVRAVADPWPGAFSYAG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHTSAAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|117164721|emb|CAJ88269.1| putative formyltransferase [Streptomyces ambofaciens ATCC 23877]
Length = 315
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 78/310 (25%), Positives = 135/310 (43%), Gaps = 20/310 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TLQAL+ S H +V V T P + K +V A+E +P
Sbjct: 1 MRVVMFGYQTWGHRTLQALLDSEHDVVLVVTHP--KSEHAYEKIWSDSVADLAEEHGVPV 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L+ + EE +E+ + D+ V + IP RI + G N H SLLP++ G +P
Sbjct: 59 LIRNRPDDEELFERLKEADPDIIVANNWRTWIPPRIFGLPRHGTLNVHDSLLPKYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ E G+ M+ LD G + VP+ L + L A V A
Sbjct: 119 LIWALINGEREVGVTAHMMNDELDAGDIVRQEAVPVGPTDTATDLFHKTVDLIAPVTVGA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMM 240
+ + + Q + ++ K S + R+++ AE++ +RA P+P A+
Sbjct: 179 LGLIAAGQTEFTKQDRSLASFFHKRSAEDIRIDWTWPAEDLERLVRAQSEPYPSAFTF-- 236
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAG 288
++ R+++L + + EG G PG + I A + + R++
Sbjct: 237 --HRGRRLEVLAAVVSEGRYGGTPGRIFYREGDGVVIVAGADARTGRNHGLAVTRVRTED 294
Query: 289 GRVLDIGDFL 298
GR L ++
Sbjct: 295 GRELSAAEYF 304
>gi|293363782|ref|ZP_06610523.1| methionyl-tRNA formyltransferase [Mycoplasma alligatoris A21JP2]
gi|292552648|gb|EFF41417.1| methionyl-tRNA formyltransferase [Mycoplasma alligatoris A21JP2]
Length = 282
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 78/292 (26%), Positives = 143/292 (48%), Gaps = 15/292 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++ GT F+V + ++++ +V + +QP +P RG + A++ ++
Sbjct: 4 KIKILLAGTPVFSVPIFEEVINN-FEVVGIISQPDKPH-NRGYTLSETPTKILAKKHNI- 60
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L + + YE+ + D + A+G IP IL K+ N H SLLP++RGAAP
Sbjct: 61 TLFQPEKISQIYEELNQMDFDFLLTAAFGQYIPSNILELPKIASINIHGSLLPKYRGAAP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ +++ GDNETGI+++ M K +D G + + K+PI+ + + ++S L + +
Sbjct: 121 IQYSLLNGDNETGISLIYMTKKMDAGKILKVAKIPINKTDTSDSMFIKISELATKNITQW 180
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L N + Q E +T + K+ K ++ + S + N IRA S PGA+ I
Sbjct: 181 LKDLYYKNFTETEQNEELVTLSPKLEKEDSLLLNTDSMKTNFNKIRAFSSNPGAY----I 236
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLD 293
N ++RIK+ + + + P I CS G + + Q + +
Sbjct: 237 LNNNKRIKIYYATDQKTKNVP--------IIECSDGQLFALDYQYESKKRIK 280
>gi|288573339|ref|ZP_06391696.1| formyl transferase domain protein [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288569080|gb|EFC90637.1| formyl transferase domain protein [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 309
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 76/311 (24%), Positives = 132/311 (42%), Gaps = 14/311 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL-PAL 63
+V +E L+ L ++V+V T P + +V + A+ + P L
Sbjct: 6 IVVFAYNEVGYRCLETLFDMEANVVAVVTYTDDP----DEEIWFRSVAELARSRGIEPLL 61
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
Q+ + + Y VIP++IL KLG YN H SLLPR+RG A +
Sbjct: 62 DLDLKDQQNVKTIKKLKPKLIFSFYYRDVIPEKILKIAKLGAYNMHGSLLPRYRGRACVN 121
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
AI+ G+ ETG + +M +D G V V I + ++ A + +
Sbjct: 122 WAILNGEKETGATLHRMTSKVDRGEVIDQEVVRIEETDGAKEVFLKVCDAAAEIVARTLP 181
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNF-CRSAENVHNHIRALSPFPGAWLEMMIG 242
+LE + + Q E T + + + S + P+PGA+ +
Sbjct: 182 ELESGRVVGAAQDETMATEFGGRRPEDGIIRWSNDSRRIYNLIRAVTHPYPGAYTDY--- 238
Query: 243 NKHERIKLLESQLVEGE--GKPGEVIN-PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +++ + + EG GKPGEV++ T+A +G +R++R Q G +D DF
Sbjct: 239 -RGKKLFIWWGKPQEGTSLGKPGEVLSLDPLTVATGRGNLRVLRAQLDGEIEMDGPDFAR 297
Query: 300 GCPVIIGCIVG 310
+ +G ++G
Sbjct: 298 -KNLNVGTLLG 307
>gi|218700729|ref|YP_002408358.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli IAI39]
gi|226723710|sp|B7NNT4|ARNA_ECO7I RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|218370715|emb|CAR18528.1| fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase
[Escherichia coli IAI39]
Length = 660
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 67/312 (21%), Positives = 140/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I +IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLIHDKILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKDGNILEIAQRENEATCFGRRTPEDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+++ + S++ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 ----NQKFTVWSSRVHSHAPAAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G +
Sbjct: 293 AQTLGLVQGSRL 304
>gi|330970164|gb|EGH70230.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 664
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 73/316 (23%), Positives = 129/316 (40%), Gaps = 15/316 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V + LQAL+ + + I +V+T P K+ +V + +
Sbjct: 1 MSTKAVVFAYHDIGCVGLQALLDAGYEIAAVFTHADDPRE----KTFFGSVAQLCARHGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
E+ D Y ++ +L K N H SLLPR+RG
Sbjct: 57 AVHAPEDPNHPLWVERIGKLAPDFIFSFYYRQLLGDSLLACAKKAALNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G++ETG+ + +M K D GP+ ++V IS+ L +L A +
Sbjct: 117 APANWVLVNGESETGVTLHQMVKRADAGPIVAQQRVSISATDTALTLHGKLRDAAADLLC 176
Query: 180 EAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWL 237
E + L P +PQ E+ TY + + + +++ A ++N IR P+PGA+
Sbjct: 177 ETLPLLAAQGQLPATPQDESRATYFGRRTPADGLIDWSLPATQLYNLIRAVTQPYPGAFC 236
Query: 238 EMMIGNKHERIKLLESQLVEGEG--KPGEVINPN-FTIACSQGAVRIMRLQR-AGGRVLD 293
+ ++ + + + PG VI+ IAC +G++ I QR G L
Sbjct: 237 PVGDN----KLIVWTASVDTSSNGEAPGTVISHEPLRIACGEGSLVITAGQRGDNGLYLS 292
Query: 294 IGDFLLGCPVIIGCIV 309
++ G +
Sbjct: 293 GEQLAREFGLVAGSQL 308
>gi|220903298|ref|YP_002478610.1| methionyl-tRNA formyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|254789350|sp|B8J1H5|FMT_DESDA RecName: Full=Methionyl-tRNA formyltransferase
gi|219867597|gb|ACL47932.1| methionyl-tRNA formyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 337
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 96/320 (30%), Positives = 135/320 (42%), Gaps = 31/320 (9%)
Query: 4 RVVFMGTSEFAV---------ATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKK 54
R+VFMGT FA IV+VYTQP RPAG RG K +SAV K
Sbjct: 8 RIVFMGTPGFAAASLRRLAAWP--------RAHIVAVYTQPDRPAG-RGQKLAMSAVKKL 58
Query: 55 AQEFSLPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
A E +P P G E + +F DV V AYGL++P +L+ +L N HAS+L
Sbjct: 59 ALELGIPVCQPASLKGAEAQAELAAFRPDVLAVAAYGLILPDAVLDMPRLAPVNVHASIL 118
Query: 114 PRWRGAAPIQRAIMAGDNETG--IAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
P RGAAPIQRA+M G + + + L L+
Sbjct: 119 PGLRGAAPIQRAVMEGWQPGARAGISIMRIGSRLDAGPVYAMGDTPIGEHTSGSLHDALA 178
Query: 172 VLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
L A +V +D L + Q E+ T+A K+ K + +N+ RSA H IR ++P
Sbjct: 179 ELGAELLVTVLDDLMEGRAVAVEQDESLATHAAKLGKRDGYINWTRSAAEAHAQIRGVTP 238
Query: 232 FPGAWLEMMIG---NKHERIKLLESQL-----VEGEGKPGEVINPN--FTIACSQGAVRI 281
PGA + + + R L PG V + +IAC +
Sbjct: 239 RPGARTVLHLDAGTDFEARSMPLIVSPGTIGETAAGTAPGSVRHDGQDISIACGDCWYTL 298
Query: 282 MRLQRAGGRVLDIGDFLLGC 301
++ G + + + D L G
Sbjct: 299 GMVRPEGRKDMPVRDLLNGS 318
>gi|310766942|gb|ADP11892.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Erwinia sp. Ejp617]
Length = 659
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 69/310 (22%), Positives = 135/310 (43%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + L+AL + + I +V+T A S+V + A + +P
Sbjct: 1 MKAVVFAYHDIGCTGLRALAEAGYQIAAVFTHADNAAENH----FFSSVARTATQLGVPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ S DV Y ++ I+N+ G +N HASLLP++RG AP
Sbjct: 57 YAPEDVNHPLWIDRIRSMAPDVIFSFHYRHMLNDAIINSASRGAFNLHASLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +KVPI+ + L ++ +
Sbjct: 117 LNWVLVNGEQETGVTLHRMVKQADAGAIIAQKKVPIADRDDALTLHHKVCAAAGELLAIT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N PQ E+ +Y + + + R+++ A+ +HN +R P+PGA+ +
Sbjct: 177 LPDMQSGNDVGHPQDESLASYVGRRTPEDGRIDWRLPAQQIHNLVRAVTDPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
G + + +PG +++ +ACS GA+ I+ Q G +
Sbjct: 237 SGKFIVWQS--KVRHDCPANRPGTILSVAPLVVACSAGALEIVTGQSDSGIYMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G ++
Sbjct: 295 TLGLVAGALL 304
>gi|188534508|ref|YP_001908305.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Erwinia tasmaniensis Et1/99]
gi|226723716|sp|B2VBI9|ARNA_ERWT9 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|188029550|emb|CAO97427.1| Bifunctional polymyxin resistance arnA protein (Polymyxin
resistance protein pmrI) [Includes: UDP-glucuronic acid
decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase)
(ArnAFT); UDP-4-amino-4-deoxy-L-arabinose
formyltransferase (EC 2.1.2.-) (UDP-L- [Erwinia
tasmaniensis Et1/99]
Length = 660
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 66/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL + + I +++T A ++V + A E +P
Sbjct: 1 MKAVVFAYHDIGCTGIRALAEAGYEIAAIFTHADNAAENH----FFASVARTAAELGVPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D Y ++ I+N+ LG +N HASLLP++RG AP
Sbjct: 57 YAPEDANHPLWVDRIRGMKPDAIFSFHYRHMLNDDIINSASLGAFNLHASLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + V I+ + L +++ + EA
Sbjct: 117 LNWVLVNGEQETGVTLHRMVKRADAGAIIAQNTVAIADRDDALTLHRKVCAAAGELLAEA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ Q E+ +Y + + + R+++ A+ V+N +R P+PGA+ +
Sbjct: 177 LPAIKIGEFSEHQQDESQASYVGRRTPEDGRIDWHLPAQRVYNLVRAVTDPWPGAFGYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
G + KPG V++ F +AC++GA+ I+ Q G +
Sbjct: 237 TGKFIVWQS--KIHYDRAAAKPGTVLSVAPFVVACAEGALEIVTGQSESGVYMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVAGARL 304
>gi|315639301|ref|ZP_07894463.1| methionyl-tRNA formyltransferase [Campylobacter upsaliensis JV21]
gi|315480627|gb|EFU71269.1| methionyl-tRNA formyltransferase [Campylobacter upsaliensis JV21]
Length = 302
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 84/306 (27%), Positives = 136/306 (44%), Gaps = 12/306 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF-- 58
M ++VFMGT +A LQ L+ +++++TQP + G R S Q+
Sbjct: 1 MK-KLVFMGTPAYATHILQELL-RHFELLALFTQPDKAVG-RKQILTPSDTKAFLQKTAP 57
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P L EE + L +VVA I + + N HASLLP++RG
Sbjct: 58 QIPIFTPKSLKDEELFESLKALKPDFIVVAAYGKILPQNILDLA-PCINLHASLLPKYRG 116
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+PIQ AI+ GD +G+ M MD LDTG + + I + ++ + A+
Sbjct: 117 ASPIQSAILNGDEVSGVCSMLMDAGLDTGAILQSVECDIKDKKAEEVFEIFGNLAASLAV 176
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + Q E+ ++ K K E + A+ ++ A P+PG +
Sbjct: 177 ETL---RHFSQITPQKQDESKVSI-CKKIKKEDGLVDLSHAKKLYRKFLAFYPWPGVF-- 230
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ G K I+L + + E EG + +F + C +G +RI LQ +G + LD FL
Sbjct: 231 LENGLKFLDIELYDEKENEKEGLILALEKESFLLTCKKGTLRIKVLQESGKKPLDGRTFL 290
Query: 299 LGCPVI 304
G +
Sbjct: 291 NGKRLK 296
>gi|269792635|ref|YP_003317539.1| formyl transferase domain-containing protein [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100270|gb|ACZ19257.1| formyl transferase domain protein [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 305
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 83/311 (26%), Positives = 147/311 (47%), Gaps = 17/311 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL-P 61
++ + + F L+ L++ + + T+PPRPAG RG + ++ V + A F L P
Sbjct: 1 MKWAVLSSGPFGALWLEGLLAVGRRPLWIMTKPPRPAG-RGYRERVTPVEEVALSFGLTP 59
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ + DV VV I + +L+ +G N H SLLP+ RGAAP
Sbjct: 60 VRTNSPVDDVAALAPQ--GLDVLFVVDCSFFIREPLLSFPTMGCINLHPSLLPQLRGAAP 117
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQRA+ G + TG+ + ++ + +D GP+ P+ + + L +L+ L + +
Sbjct: 118 IQRALWMGLDVTGVTMFRLVEEMDAGPILMRVPHPVDPDDHFGSLLPKLARLASRMTGDF 177
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D ++ PQ + A +IS ETRV++ A V + IRALSP P AW +
Sbjct: 178 LD--APDSFSPVPQEGSPSY-APRISNQETRVDWGDGASRVRDMIRALSPSPCAWSTLGG 234
Query: 242 GNKHERIKLLESQLVEG---EGKPG-EVINPNF-TIACSQGA-VRIMRLQRAGGRVLDIG 295
RI++L++ + + PG + + + C G+ + ++ +Q G R ++
Sbjct: 235 R----RIRILKASVDQYPPISSPPGAHYVRDSLPCVVCGDGSGLVLLEVQPEGKRPMESA 290
Query: 296 DFLLGCPVIIG 306
+L G + G
Sbjct: 291 SWLKGLRLSPG 301
>gi|320178771|gb|EFW53734.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella boydii ATCC 9905]
Length = 660
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVAHLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 MLGLVQGSRL 304
>gi|194433309|ref|ZP_03065589.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella dysenteriae 1012]
gi|194418403|gb|EDX34492.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella dysenteriae 1012]
Length = 660
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVAHLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 MLGLVQGSRL 304
>gi|152972353|ref|YP_001337499.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|166988216|sp|A6TF98|ARNA_KLEP7 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|150957202|gb|ABR79232.1| hypothetical protein KPN_03845 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 661
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 69/312 (22%), Positives = 132/312 (42%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QAL+ + + I +++T P P G +V + A E +P
Sbjct: 1 MKAVVFAYHDMGCTGIQALLDAGYDIAAIFTHPDNP----GENHFFGSVARLAAEQGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ DV Y ++ ILN G +N H SLLP++RG AP
Sbjct: 57 WAPEDVNHPLWIERIREMKPDVLFSFYYRNLLGDEILNLAPKGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M D G + + V I ++ L ++L + A
Sbjct: 117 LNWVLVNGESETGVTLHRMVNRADAGDIVAQQAVAIGADDAALTLHRKLCAAATELLSRA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + PQ + TY + + + R+++ A+ +HN +R P+PGA+
Sbjct: 177 LPAILAGTTDERPQDHSQATYVGRRTPEDGRLDWELPAQTLHNLVRAVSDPWPGAFGYAG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + +S++ KPG V++ +AC GA+ I+ Q G +
Sbjct: 237 AN----KFIVWKSRVRHDLPAAKPGTVLSIAPLIVACQDGALEIVTGQTERGVYMQGAQL 292
Query: 298 LLGCPVIIGCIV 309
++ G ++
Sbjct: 293 AQALGLVSGAVI 304
>gi|324112788|gb|EGC06764.1| NAD dependent epimerase/dehydratase [Escherichia fergusonii B253]
Length = 660
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 69/312 (22%), Positives = 136/312 (43%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QAL+ + + I +++T PA K +V + A +P
Sbjct: 1 MKAVVFAYHDMGCLGVQALLDAGYEISAIFTHADNPAE----KVFYGSVSRLAALAGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ DV Y ++ IL G +N H SLLP++RG AP
Sbjct: 57 YAPDDINHPLWVERIAQLAPDVIFSFYYRNLLNNEILKLAPHGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ + G+NETG+ + +M D G + ++V I L ++L + + A
Sbjct: 117 LNWVLENGENETGVTLHRMVAKADAGAIIAQQRVAIDPEDAALTLHKKLCQSASQMLEYA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++Q + Q E+ TY + ++ +++ + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKQGQTQETAQNESEATYFGRRKPEDSFLDWNKPATVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ + S++ +PG VI+ F IAC GA+ ++ Q G +
Sbjct: 237 T----QKFTIWSSRVHPRVNAAQPGSVISVAPFLIACGDGALEVITGQSVDGITMQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G +
Sbjct: 293 AQTLGLVEGSRL 304
>gi|218548295|ref|YP_002382086.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia fergusonii ATCC 35469]
gi|226723717|sp|B7LM76|ARNA_ESCF3 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|218355836|emb|CAQ88449.1| fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase
[Escherichia fergusonii ATCC 35469]
Length = 660
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 69/312 (22%), Positives = 136/312 (43%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QAL+ + + I +++T PA K +V + A +P
Sbjct: 1 MKAVVFAYHDMGCLGVQALLDAGYEISAIFTHADNPAE----KVFYGSVSRLAALAGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ DV Y ++ IL G +N H SLLP++RG AP
Sbjct: 57 YAPDDINHPLWVERIAQLAPDVIFSFYYRNLLNNEILKLAPHGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ + G+NETG+ + +M D G + ++V I L ++L + + A
Sbjct: 117 LNWVLENGENETGVTLHRMVAKADAGAIIAQQRVAIDPEDAALTLHKKLCQSASQMLEYA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++Q + Q E+ TY + ++ +++ + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKQGQTQETAQNESEATYFGRRKPEDSFLDWNKPATVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ + S++ +PG VI+ F IAC GA+ ++ Q G +
Sbjct: 237 T----QKFTIWSSRVHPRVNAAQPGSVISVAPFLIACGDGALEVITGQSVDGITMQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G +
Sbjct: 293 AQTLGLVEGSRL 304
>gi|85059821|ref|YP_455523.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Sodalis glossinidius str.
'morsitans']
gi|123766408|sp|Q2NRV7|ARNA_SODGM RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|84780341|dbj|BAE75118.1| putative formyl transferase [Sodalis glossinidius str. 'morsitans']
Length = 660
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 65/309 (21%), Positives = 134/309 (43%), Gaps = 7/309 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + + AL+++ ++I ++ T P P+ K+ +V + A E ++P
Sbjct: 1 MKAVIFAYHDMGCVGVTALINAGYTIEAIITHPDAPSE----KTFFGSVARIAAEHNIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ + DV Y ++ Q IL+ +G +N H SLLPR+RG +P
Sbjct: 57 FVPDDVNHPLWIARIKALAPDVIFSFYYRQLLCQDILSLPTVGAFNLHGSLLPRYRGRSP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M D G + R V I+ + L ++L A + +
Sbjct: 117 LNWVLVNGEQETGVTLHRMTARADAGAILAQRSVAITLQDDALTLHRKLCEAAAGVLEKV 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + +PQ E+ +Y + + R+++ + A + N +RA++
Sbjct: 177 LPAIREQRCTETPQDESIASYVGHRTPEDGRIDWGQPAATLANLVRAVTDPWPGAFSYAG 236
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN-PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
G K K + + + +PG V++ IAC A+ + Q G + G
Sbjct: 237 GEKFIIWK-AQVRPNSADAQPGTVLSIDPLVIACGSDALEVQTGQSQQGVYMQGGQLAHA 295
Query: 301 CPVIIGCIV 309
++ G ++
Sbjct: 296 LGLVKGALL 304
>gi|295698623|ref|YP_003603278.1| methionyl-tRNA formyltransferase [Candidatus Riesia pediculicola
USDA]
gi|291157098|gb|ADD79543.1| methionyl-tRNA formyltransferase [Candidatus Riesia pediculicola
USDA]
Length = 320
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 90/325 (27%), Positives = 171/325 (52%), Gaps = 22/325 (6%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHS----IVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
M LRV+F G+S F+ L L+ S+ +V + + P RP+G RGL + +++ K +
Sbjct: 1 MKRLRVIFAGSSHFSKIHLLNLLKFSNKRLIHVVGILSTPDRPSG-RGLFAEPNSIKKIS 59
Query: 56 QEFSLPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
+E + + P + Y+ S D+ +V Y L+ P+ IL G +N H SLLP
Sbjct: 60 EELRIDCIQPNFLNDEFVYDWIFSKKVDIIIVAQYRLIFPEEILKRIPFGVWNIHCSLLP 119
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
RWRG +PIQ AI+ GD TG++I++M+ +DTG + + I + L ++L +
Sbjct: 120 RWRGPSPIQYAILTGDERTGVSIVQMNSRIDTGDIIYQSCCLIDKGETFSSLYRKLVKVS 179
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAE-NVHNHIRALSPFP 233
+++ ++D L + + L Q EN TY++KI+K +++ S ++ IRA +P
Sbjct: 180 LFSIMRSIDLLIKEKIVLKKQNENLATYSKKINKEMAEISWSSSTSLDLERKIRAFQFWP 239
Query: 234 GAWLEMMIGNKHERIKLLESQLVE---GEGKPGEVIN---PNFTIACSQGAVRIMRLQRA 287
++ ++ E IK+L+++LVE G PG ++ ++ +G ++I++++++
Sbjct: 240 VSYFKV----NQETIKILQAELVENYFGHALPGTIVRIERNGTIVSAKEGFLKILKMRKS 295
Query: 288 GGRVLDIGDFLLGCPVI---IGCIV 309
G + + +F + G ++
Sbjct: 296 GRKTVSSFEFKN-YHLPWYQEGTLL 319
>gi|262040545|ref|ZP_06013786.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
gi|259042138|gb|EEW43168.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
Length = 661
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 68/288 (23%), Positives = 125/288 (43%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QAL+ + + I +++T P P G +V + A E +P
Sbjct: 1 MKAVVFAYHDMGCTGIQALLDAGYDIAAIFTHPDNP----GENHFFGSVARLAAEQGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ DV Y ++ ILN G +N H SLLP++RG AP
Sbjct: 57 WAPEDVNHPLWIERIREMKPDVLFSFYYRNLLGDEILNLAPKGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M D G + + V I ++ L ++L + A
Sbjct: 117 LNWVLVNGESETGVTLHRMVNRADAGDIVAQQAVAIGADDAALTLHRKLCAAATELLSRA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + PQ + TY + + + R+++ A+ +HN +R P+PGA+
Sbjct: 177 LPAILAGTTDERPQDHSQATYVGRRTPEDGRLDWELPAQTLHNLVRAVSDPWPGAFGYAG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQ 285
+ + +S++ KPG VI+ +AC GA+ I+ Q
Sbjct: 237 AN----KFIVWKSRVRHDLPAAKPGTVISIAPLIVACQDGALEIVTGQ 280
>gi|71894535|ref|YP_278643.1| methionyl-tRNA formyltransferase [Mycoplasma synoviae 53]
Length = 275
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 79/286 (27%), Positives = 138/286 (48%), Gaps = 14/286 (4%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
GT EF+V + ++ + +V++ TQP +PA +RG S V K A +++L +
Sbjct: 2 AGTPEFSVPIFKEIIKN-FEVVAIVTQPDKPA-KRGQNLQESPVKKLALKYNLKLF-QPE 58
Query: 68 LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127
YE+ + D + A+G IP+ ILN K N H SLLP++RGAAPIQ A++
Sbjct: 59 KISMIYEELKELDFDYMLTAAFGQYIPENILNLPKKFPLNIHGSLLPKYRGAAPIQHALL 118
Query: 128 AGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQ 187
+ ETG+ ++ M K +D G + K+ I + + L ++LS L A +V + L+Q
Sbjct: 119 NNETETGVQLIIMTKKMDAGDILKEAKIKIEESDISLTLFEKLSNLAAENIVSWIHDLDQ 178
Query: 188 NNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHER 247
NN Q E+ +T A K+ K ++ ++ ++ + I+A + PGA I ++
Sbjct: 179 NNYQRIIQDESKVTLASKLLKEDSFLDKTKTKKENIAKIKAFALNPGAR---YINENNKL 235
Query: 248 IKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLD 293
+K+ + + I C G + + Q + +
Sbjct: 236 VKVYFATENK--------IKNAPVFTCVDGDIFLNDYQIESKKRVT 273
>gi|238896942|ref|YP_002921687.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae NTUH-K2044]
gi|238549269|dbj|BAH65620.1| hypothetical protein KP1_5182 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 661
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 69/312 (22%), Positives = 132/312 (42%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +Q+L+ + + I +++T P P G +V + A E +P
Sbjct: 1 MKAVVFAYHDMGCTGIQSLLDAGYDIAAIFTHPDNP----GENHFFGSVARLAAEQGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ DV Y ++ ILN G +N H SLLP++RG AP
Sbjct: 57 WAPEDVNHPLWIERIREMKPDVLFSFYYRNLLGDEILNLAPKGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M D G + + V I ++ L ++L + A
Sbjct: 117 LNWVLVNGESETGVTLHRMVNRADAGDIVAQQAVAIGADDAALTLHRKLCAAATELLSRA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + PQ + TY + + + R+++ A+ +HN +R P+PGA+
Sbjct: 177 LPAILAGTTDERPQDHSQATYVGRRTPEDGRLDWELPAQTLHNLVRAVSDPWPGAFGYAG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + +S++ KPG VI+ +AC GA+ I+ Q G +
Sbjct: 237 AN----KFIVWKSRVRHDLPAAKPGTVISIAPLIVACQDGALEIVTGQTERGVYMQGAQL 292
Query: 298 LLGCPVIIGCIV 309
++ G ++
Sbjct: 293 AQALGLVSGAVI 304
>gi|282863174|ref|ZP_06272234.1| formyl transferase domain protein [Streptomyces sp. ACTE]
gi|282562156|gb|EFB67698.1| formyl transferase domain protein [Streptomyces sp. ACTE]
Length = 315
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 74/309 (23%), Positives = 131/309 (42%), Gaps = 18/309 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TLQAL+ S H +V V T P + K +V A++ +P
Sbjct: 1 MRVVMFGYQTWGHRTLQALLDSEHDVVLVVTHP--KSEHAYEKIWSDSVADLAEDHGVPV 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L+ + +E + + D+ V + IP RI + G N H SLLP++ G +P
Sbjct: 59 LIRNRPDDDELFRRLEEAAPDIIVANNWRTWIPPRIFRLPRHGTLNVHDSLLPKYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G++E G+ M+ LD G V V + T L + L A + A
Sbjct: 119 LIWALINGESEVGVTAHMMNDELDAGAVVRQEAVQVGPTDTTTDLFHKTVELIAPVTIGA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + + Q + T+ K S + R+++ AE++ +RA +
Sbjct: 179 LDLIASGRTDFTEQDRSQATFFHKRSAEDIRIDWNWPAEDLERLVRAQ---SEPYPSAFT 235
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAGG 289
+K +R+++L + + E G PG + I A + I R++ G
Sbjct: 236 YHKGKRLEVLAAAVSENRYGGTPGRIFYREGDGVVIVAGADARTGRNHGLAIRRVRTEDG 295
Query: 290 RVLDIGDFL 298
R + ++
Sbjct: 296 REIPATEYF 304
>gi|115376636|ref|ZP_01463866.1| methionyl-tRNA formyltransferase [Stigmatella aurantiaca DW4/3-1]
gi|115366379|gb|EAU65384.1| methionyl-tRNA formyltransferase [Stigmatella aurantiaca DW4/3-1]
Length = 266
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 90/259 (34%), Positives = 142/259 (54%), Gaps = 8/259 (3%)
Query: 54 KAQEFSLPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
A E +P L P K E+ DV VV AYG ++P+ +L + G N HASL
Sbjct: 2 LALERGVPVLQPPKLRTPPFSEELRKLAPDVCVVTAYGKILPKDVLEVPRRGCVNVHASL 61
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPR+RGAAPIQ AI GD ETG+++M MD+ LDTGPV M+++PI+ +A L +LS
Sbjct: 62 LPRFRGAAPIQWAIAHGDAETGVSLMCMDEGLDTGPVLEMKRLPIAPEDTSATLHDKLSQ 121
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
L + E++ + L PQ G+ A I K + +++F R A + +RA +P+
Sbjct: 122 LGGGILRESLPAYLRGELKPVPQPTEGVVLAPIIQKEDGQLDFTRPAVELERRLRAFTPW 181
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGG 289
PG + + R+K+ +++ G+G PG V+ + +AC++G++ ++ +Q G
Sbjct: 182 PGVFTGLNGA----RLKVHRTKVGAGQGAPGTVLAASSAGIEVACAEGSLVLLDVQPEGR 237
Query: 290 RVLDIGDFLLGCPVIIGCI 308
RV+ +FL G + G
Sbjct: 238 RVMSAHEFLAGHKLAPGSQ 256
>gi|51596652|ref|YP_070843.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pseudotuberculosis IP 32953]
gi|153948868|ref|YP_001400702.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pseudotuberculosis IP 31758]
gi|186895709|ref|YP_001872821.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pseudotuberculosis PB1/+]
gi|81595797|sp|Q93PD8|ARNA_YERPS RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|166988219|sp|A7FHH4|ARNA_YERP3 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|226723728|sp|B2K5L3|ARNA_YERPB RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|14582789|gb|AAK69642.1|AF336802_4 unknown [Yersinia pseudotuberculosis]
gi|51589934|emb|CAH21566.1| probable formyl transferase [Yersinia pseudotuberculosis IP 32953]
gi|152960363|gb|ABS47824.1| bifunctional polymyxin resistance ArnA protein [Yersinia
pseudotuberculosis IP 31758]
gi|186698735|gb|ACC89364.1| NAD-dependent epimerase/dehydratase [Yersinia pseudotuberculosis
PB1/+]
Length = 667
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 71/288 (24%), Positives = 133/288 (46%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + L AL + + I +V+T P R S+V + A + +LP
Sbjct: 1 MKAIVFAYHDIGCVGLNALAEAGYDIQAVFTHTDNPGENR----FFSSVARVAADLALPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ D+ Y ++ IL+ G +N H SLLP++RG AP
Sbjct: 57 FAPEDVNHPLWVERIRELQPDIIFSFYYRNMLSDEILSLAPQGGFNLHGSLLPQYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I ++ G+ ETG+ + +M K D GP+A KV IS L ++ +
Sbjct: 117 INWVLVNGETETGVTLHQMVKKADAGPIAGQYKVAISDVDTALTLHAKMRDAAQELLRNL 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++++ LPL+PQ E +Y + + + +++ +SA ++N +R P+PGA+ +
Sbjct: 177 LPRMKEGPLPLTPQKEADASYFGRRTAADGEIHWQKSAFTINNLVRAVTEPYPGAFSYLG 236
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRIMRLQ 285
++ + S+ ++ PG V++ T+AC +GA+ I+ Q
Sbjct: 237 ----QRKLTIWRSRPLDLVHNKLPGTVLSTAPLTVACGEGALEIITGQ 280
>gi|22125812|ref|NP_669235.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis KIM 10]
gi|45441997|ref|NP_993536.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis biovar Microtus str.
91001]
gi|108807759|ref|YP_651675.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis Antiqua]
gi|108812036|ref|YP_647803.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis Nepal516]
gi|145598033|ref|YP_001162109.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis Pestoides F]
gi|149365672|ref|ZP_01887707.1| probable formyl transferase [Yersinia pestis CA88-4125]
gi|162419909|ref|YP_001607017.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis Angola]
gi|165927508|ref|ZP_02223340.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165939521|ref|ZP_02228067.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Orientalis str. IP275]
gi|166011815|ref|ZP_02232713.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166211092|ref|ZP_02237127.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167400957|ref|ZP_02306463.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167422073|ref|ZP_02313826.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167424841|ref|ZP_02316594.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|167469208|ref|ZP_02333912.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
FV-1]
gi|218929508|ref|YP_002347383.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis CO92]
gi|229837945|ref|ZP_04458104.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229895105|ref|ZP_04510281.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis Pestoides A]
gi|229898506|ref|ZP_04513651.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229902347|ref|ZP_04517467.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis Nepal516]
gi|270490471|ref|ZP_06207545.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis KIM D27]
gi|294503577|ref|YP_003567639.1| hypothetical protein YPZ3_1467 [Yersinia pestis Z176003]
gi|81517989|sp|Q8ZDX8|ARNA_YERPE RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|123246475|sp|Q1CIH7|ARNA_YERPN RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|123372411|sp|Q1C742|ARNA_YERPA RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|166988220|sp|A4TIM4|ARNA_YERPP RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|226723729|sp|A9R093|ARNA_YERPG RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|21958739|gb|AAM85486.1|AE013794_7 putative transformylase [Yersinia pestis KIM 10]
gi|45436860|gb|AAS62413.1| probable formyl transferase [Yersinia pestis biovar Microtus str.
91001]
gi|108775684|gb|ABG18203.1| formyl transferase [Yersinia pestis Nepal516]
gi|108779672|gb|ABG13730.1| formyl transferase [Yersinia pestis Antiqua]
gi|115348119|emb|CAL21047.1| probable formyl transferase [Yersinia pestis CO92]
gi|145209729|gb|ABP39136.1| formyl transferase [Yersinia pestis Pestoides F]
gi|149292085|gb|EDM42159.1| probable formyl transferase [Yersinia pestis CA88-4125]
gi|162352724|gb|ABX86672.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
Angola]
gi|165912570|gb|EDR31201.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Orientalis str. IP275]
gi|165920563|gb|EDR37840.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165989280|gb|EDR41581.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166208272|gb|EDR52752.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Antiqua str. B42003004]
gi|166958885|gb|EDR55906.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167049810|gb|EDR61218.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167056028|gb|EDR65806.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|229680682|gb|EEO76778.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis Nepal516]
gi|229688054|gb|EEO80125.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229694311|gb|EEO84358.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229701867|gb|EEO89890.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis Pestoides A]
gi|262361619|gb|ACY58340.1| hypothetical protein YPD4_1432 [Yersinia pestis D106004]
gi|262365639|gb|ACY62196.1| hypothetical protein YPD8_1513 [Yersinia pestis D182038]
gi|270338975|gb|EFA49752.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis KIM D27]
gi|294354036|gb|ADE64377.1| hypothetical protein YPZ3_1467 [Yersinia pestis Z176003]
gi|320015075|gb|ADV98646.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 667
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 71/288 (24%), Positives = 133/288 (46%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + L AL + + I +V+T P R S+V + A + +LP
Sbjct: 1 MKAIVFAYHDIGCVGLNALAEAGYDIQAVFTHTDNPGENR----FFSSVARVAADLALPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ D+ Y ++ IL+ G +N H SLLP++RG AP
Sbjct: 57 FAPEDVNHPLWVERIRELQPDIIFSFYYRNMLSDEILSLAPQGGFNLHGSLLPQYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I ++ G+ ETG+ + +M K D GP+A KV IS L ++ +
Sbjct: 117 INWVLVNGETETGVTLHQMVKKADAGPIAGQYKVAISDVDTALTLHAKMRDAAQELLRNL 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++++ LPL+PQ E +Y + + + +++ +SA ++N +R P+PGA+ +
Sbjct: 177 LPRMKEGPLPLTPQKEADASYFGRRTAADGEIHWQKSAFTINNLVRAVTEPYPGAFSYLG 236
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRIMRLQ 285
++ + S+ ++ PG V++ T+AC +GA+ I+ Q
Sbjct: 237 ----QRKLTIWRSRPLDLVHNKLPGTVLSTAPLTVACGEGALEIITGQ 280
>gi|333001402|gb|EGK20970.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
VA-6]
Length = 660
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 66/310 (21%), Positives = 131/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVAHLAAERDIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I I G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEIFQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 MLGLVQGSRL 304
>gi|332088385|gb|EGI93503.1| bifunctional polymyxin resistance protein arnA domain protein
[Shigella boydii 5216-82]
Length = 374
Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVAHLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVYPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 MLGLVQGSRL 304
>gi|163794191|ref|ZP_02188163.1| Methionyl-tRNA formyltransferase [alpha proteobacterium BAL199]
gi|159180359|gb|EDP64880.1| Methionyl-tRNA formyltransferase [alpha proteobacterium BAL199]
Length = 295
Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 75/301 (24%), Positives = 134/301 (44%), Gaps = 15/301 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+V G F A L+ L+ ++V+V P + GR + + A E LP
Sbjct: 1 MRIVVHGQQAFGKAVLERLLERGENVVAVCCAPTK-EGR-----PEDPLAEYASEKGLPV 54
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E E SF ADV ++ L +PQ + +A G + H SL P RG +
Sbjct: 55 HRPASWKTPEALELMKSFKADVCMMAYVLLFVPQEVRDAPTYGTFQYHPSLCPWHRGPSS 114
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCAHAMVE 180
I I G +TG+ I D LD GP+ + I + + + + AM+E
Sbjct: 115 INWPIAMGKTQTGLTIFWPDDGLDEGPIMLQKTCEIGPDETLGDVYFKKLFPMGVDAMIE 174
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ ++ + Q +Y R+++ +SA +V+N IRA +P PGA +
Sbjct: 175 GLELVKAGVILKHNQRLEDGSYESWFKAENARIDWSKSARDVYNLIRAANPAPGAQTTIH 234
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + +L++G+G PG+++ + + + G ++I R++ AGG+ +
Sbjct: 235 GTELQ----VFDCKLLDGDGTPGDLVETNDAGIVMQANGGRIQIERVRPAGGQKQPATAW 290
Query: 298 L 298
+
Sbjct: 291 I 291
>gi|302549384|ref|ZP_07301726.1| methionyl-tRNA formyltransferase [Streptomyces viridochromogenes
DSM 40736]
gi|302467002|gb|EFL30095.1| methionyl-tRNA formyltransferase [Streptomyces viridochromogenes
DSM 40736]
Length = 315
Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 72/309 (23%), Positives = 131/309 (42%), Gaps = 18/309 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP- 61
+RVV G + TLQAL+ S H +V V T P + K +V A+E +P
Sbjct: 1 MRVVMFGYQTWGHRTLQALLDSEHDVVLVVTHP--KSEHAYEKIWNDSVADLAEEHGVPV 58
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ E +++ + D+ V + IP RI + G N H SLLP++ G +P
Sbjct: 59 VIRNRPDDDELFQRLKEADPDIIVANNWRTWIPPRIFGLPRHGTLNVHDSLLPKYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G++E G+ M+ LD G + VP+ L + L A + A
Sbjct: 119 LIWALINGESEVGVTAHMMNDELDAGDIVRQEAVPVGPADTATDLFHKTVDLIAPVTIGA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + Q + ++ K S ++R+++ AE++ +RA +
Sbjct: 179 LALIAAGQTEFTEQDRSQASFFHKRSLEDSRIDWTWPAEDLQRLVRAQ---SEPYPSAYA 235
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAGG 289
+K +R+++L + + EG G PG + + A + I R++ G
Sbjct: 236 FHKGKRLEVLAAVVSEGRYGGTPGRIFYREGDGVVVVAGADARTGRNHGLAITRVRTEDG 295
Query: 290 RVLDIGDFL 298
R L ++
Sbjct: 296 RELGATEYF 304
>gi|110806222|ref|YP_689742.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella flexneri 5 str. 8401]
gi|123342672|sp|Q0T2M8|ARNA_SHIF8 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|110615770|gb|ABF04437.1| putative transformylase [Shigella flexneri 5 str. 8401]
gi|332754903|gb|EGJ85268.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
4343-70]
gi|333001696|gb|EGK21262.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
K-218]
Length = 660
Score = 106 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 66/310 (21%), Positives = 131/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVAHLAAERDIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I I G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEIFQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 MLGLVQGSRL 304
>gi|333002624|gb|EGK22184.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
K-272]
gi|333016765|gb|EGK36093.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
K-227]
Length = 660
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 132/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVAHLAAERDIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRYLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 MLGLVQGSRL 304
>gi|197284923|ref|YP_002150795.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Proteus mirabilis HI4320]
gi|227355326|ref|ZP_03839727.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Proteus mirabilis ATCC 29906]
gi|254806287|sp|B4ETL7|ARNA_PROMH RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|194682410|emb|CAR42271.1| bifunctional polymyxin resistance protein [includes: UDP-glucuronic
acid decarboxylase and UDP-4-amino-4-deoxy-l-arabinose
formyltransferase [Proteus mirabilis HI4320]
gi|227164550|gb|EEI49421.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Proteus mirabilis ATCC 29906]
Length = 660
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 74/292 (25%), Positives = 127/292 (43%), Gaps = 13/292 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + L+AL + I +V+T P S+V + + E L
Sbjct: 1 MKAIVFAYHDIGCVGLKALEKAGFDIQAVFTHTDDPNENH----FFSSVARVSAEMGLTV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ DV Y ++ ILN G +N H SLLP++RG AP
Sbjct: 57 FAPENVNHPLWIERIREMKPDVIFSFYYRHMLSDEILNLAPKGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ ETG+ + KM D G + KV I + L +++ A M
Sbjct: 117 INWAIVNGETETGVTLHKMTAKADAGDIVAQEKVTIEDTDTSLILHEKVREAAAKLMAHT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + N + Q E+ TY + + +++ A+ VHN +R P+PGA+ +
Sbjct: 177 LPHIASGNYSTTAQDESQATYYGRRCADDGLIDWNADAKTVHNLVRAVTEPYPGAFTFLG 236
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQRAGG 289
++ + ++ V + +GK PG VI+ IAC++GA+ ++ Q G
Sbjct: 237 ER----KMIIWRARPVADNQGKRPGTVISTEPLVIACAKGAIEVITGQSENG 284
>gi|195341727|ref|XP_002037457.1| GM12093 [Drosophila sechellia]
gi|194131573|gb|EDW53616.1| GM12093 [Drosophila sechellia]
Length = 342
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 80/304 (26%), Positives = 138/304 (45%), Gaps = 21/304 (6%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+++F GT F++ +LQAL + + V T KS + V A++ LP
Sbjct: 37 KILFFGTDNFSLPSLQALHKNCGDRLGVVTS---------FKSPANCVRTYAEKEKLPL- 86
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+ + + D+ VVV++G +IP I+N G N HASLLP+WRGAAPI
Sbjct: 87 -----QKWPIDPSVCPQFDLGVVVSFGHLIPANIINGFPHGMINVHASLLPKWRGAAPII 141
Query: 124 RAIMAGDNETGIAIMKMDKH-LDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AIM GD TG++IMK++ H D G + R++ I +I L L+ L A +V+ +
Sbjct: 142 YAIMKGDASTGVSIMKIEPHRFDIGDILAQREMDIKPDIFMPDLHASLASLGADLLVDTV 201
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ L PQ +YA KI+ T + + + +G
Sbjct: 202 NNLSVRLKEAKPQDSTRASYAPKITSKITEIIWSELSAFEIYTRYRALYGYKNLTTSFLG 261
Query: 243 NKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ + ++L + +PG + + + I C+Q + + +++++ G + + DF
Sbjct: 262 KQVQLLELRLPEKGVPVQEPGAISYLRKSRSLIIGCAQQSQLEVLQIRVEGRKPMSAQDF 321
Query: 298 LLGC 301
G
Sbjct: 322 NNGF 325
>gi|83287940|sp|Q83QT8|ARNA_SHIFL RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|332756135|gb|EGJ86486.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
2747-71]
gi|332766075|gb|EGJ96285.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Shigella flexneri 2930-71]
Length = 660
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 66/310 (21%), Positives = 131/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVAHLAAERDIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I I G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEIFQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q G +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 MLGLVQGSRL 304
>gi|253989357|ref|YP_003040713.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253780807|emb|CAQ83969.1| bifunctional polymyxin resistance protein [Photorhabdus
asymbiotica]
Length = 660
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 68/308 (22%), Positives = 131/308 (42%), Gaps = 19/308 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + + AL+ + I +V+T P S+V + + + LP
Sbjct: 1 MKAIVFAYHDIGCVGINALIKAGFDIQAVFTHTDDPTENH----FFSSVARLSADLELPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ DV Y ++ + IL+ LG +N H SLLP++RG AP
Sbjct: 57 FAPENVNHPLWIERIRELKPDVIFSFYYRNMLSEDILSLASLGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ ETG+ + KM D G + KV I+ + L ++ + +
Sbjct: 117 INWAILNGETETGVTLHKMVLKPDAGDIIAQHKVAITETDTSLILHGKIRKAAEELLDQV 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ +PQ ++ TY + + + +++ +SA ++N IR P+PGA+ +
Sbjct: 177 LPQINAGTYTSTPQDQSQATYFGRRTAADGEIDWSKSATEINNLIRAVAEPYPGAFTFLG 236
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVIN-PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+I + + + +PG V++ IAC +GA+ I+ Q +
Sbjct: 237 ER----KITIWRASPLHESHNKQPGTVLSIEPLVIACGKGALEIISGQSE------SSLY 286
Query: 298 LLGCPVII 305
+ G +
Sbjct: 287 VRGTRLAA 294
>gi|320196126|gb|EFW70750.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli WV_060327]
Length = 660
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 67/310 (21%), Positives = 133/310 (42%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+S+ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLSTGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + +V Y +I +IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDKILQLAPRGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNTVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ +PG VI+ IAC GA+ I+ Q +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDSITMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G +
Sbjct: 295 TLGLVQGSRL 304
>gi|182413231|ref|YP_001818297.1| putative formyltransferase [Opitutus terrae PB90-1]
gi|177840445|gb|ACB74697.1| formyl transferase domain protein [Opitutus terrae PB90-1]
Length = 311
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 9/288 (3%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M+ R++F G SE L L+ ++V++ T P + K+ + A+E
Sbjct: 1 MSKPRILFFGYSEVGYECLSLLLERGDNVVALVTHEDNPHEKIWFKTP----AQAARERG 56
Query: 60 LPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P + E+ + ++ ++ + V Y +I ++L +LG +N H SLLP++RG
Sbjct: 57 IPVFTPESVNTPEWRERIARLQPELILSVYYRHMIGTKLLALPRLGAFNLHGSLLPKYRG 116
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
API A++ G+ G+ + +M K D G + V I +++ +
Sbjct: 117 RAPINWAVLHGEPRIGMTLHRMVKSADAGAIVDQDGVDIGPRDTAEQAFRKVLPCARRVL 176
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWL 237
+D L PQ + TY + + R+++ RS+ + N IR P+PGA+
Sbjct: 177 ARQIDALLAGTAKERPQDDTQATYFGGRTPEDGRIDWTRSSAQIFNLIRAVTDPYPGAFT 236
Query: 238 EMMIGNKHERIKLLE-SQLVEGEGKPGEVIN-PNFTIACSQGAVRIMR 283
++ + + + G+PGEV++ IA GA+ + +
Sbjct: 237 DVGGARLMVWWAEQDSAATSDRRGRPGEVLSLNPLVIATGDGALELTK 284
>gi|163784128|ref|ZP_02179071.1| methionyl-tRNA formyltransferase [Hydrogenivirga sp. 128-5-R1-1]
gi|159880599|gb|EDP74160.1| methionyl-tRNA formyltransferase [Hydrogenivirga sp. 128-5-R1-1]
Length = 192
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 67/152 (44%), Positives = 91/152 (59%), Gaps = 3/152 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L +VF GT +FA +L+AL++S H +++V TQP +P G RG + V AQE P
Sbjct: 16 LNIVFWGTPDFAAESLKALLNSKHKVLAVITQPDKPKG-RGKRLTPPPVKVVAQEARTPV 74
Query: 63 LVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K+ E Y Q N D+ VVVAYG ++P+ I+ K N HASLLP +RGAA
Sbjct: 75 LQPEKVKNNEELYNQLKELNPDIFVVVAYGKILPKEIIELPKYKTINVHASLLPEFRGAA 134
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFM 152
PI RAI+ G +TG+ IM++ + LD G V
Sbjct: 135 PIHRAILEGKEKTGVCIMEITEELDAGDVYAC 166
>gi|195158218|ref|XP_002019989.1| GL13743 [Drosophila persimilis]
gi|194116758|gb|EDW38801.1| GL13743 [Drosophila persimilis]
Length = 342
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 92/307 (29%), Positives = 144/307 (46%), Gaps = 27/307 (8%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R++F GT F++ +LQAL + + V T KS + V A+ LP
Sbjct: 37 RILFFGTDNFSLPSLQALHKNCSHNLGVVTS---------FKSPANCVRTYAEREKLPL- 86
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+ + + D+ VVV++G +IP +I+NA G N HASLLP WRGAAPI
Sbjct: 87 -----QRWPITEDQCTDYDLGVVVSFGHMIPAQIINAFPRGMINVHASLLPLWRGAAPII 141
Query: 124 RAIMAGDNETGIAIMKMD-KHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AIM GD TG++IMK++ H D G V R+VPI +I L LS+L A +V+ +
Sbjct: 142 YAIMKGDARTGVSIMKIEPHHFDIGAVLAQREVPIRRDIYMPELHASLSLLGADLLVDTV 201
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ L PQ +YA KI+ T + + + + A + +
Sbjct: 202 NNLSDRLKNAKPQENATASYAPKITSKITEILWTE---LSADELYARHRALYGYKNLTTS 258
Query: 243 NKHERIKLLESQLVEGEG---KPGEV----INPNFTIACSQGA-VRIMRLQRAGGRVLDI 294
++I+LLE +L E +PG + I C+QG + +++++ G + +
Sbjct: 259 FLDKQIQLLELRLPEKHLTVQEPGHFSYQRSRKSLLIGCAQGTQLEVLQVRVEGRKPMSA 318
Query: 295 GDFLLGC 301
DF G
Sbjct: 319 QDFSNGF 325
>gi|226304461|ref|YP_002764419.1| formyltransferase [Rhodococcus erythropolis PR4]
gi|226183576|dbj|BAH31680.1| putative formyltransferase [Rhodococcus erythropolis PR4]
Length = 311
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 73/309 (23%), Positives = 125/309 (40%), Gaps = 19/309 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV +G + TLQAL+ S H +V T P + + +V A E +P
Sbjct: 1 MRVATLGYQTWGHRTLQALIDSDHEVVLAITHP--KSEHVYEQMWADSVADLAAENGVPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
V K D+ V + +P + +A K G N H SLLP++ G +P+
Sbjct: 59 HVANKPDDAFKAALAEAAPDIIVANNWRTWLPAEVFDAPKYGTLNIHDSLLPKYTGFSPL 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ E G+ MD+ LD G + R + L + ++A+
Sbjct: 119 IWALINGEEEVGLTAHLMDEELDAGDIVLQRSTTVGPTDTVTDLFHRTIDMIGPITLDAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMMI 241
D + +PQ + T+ K + ++ V++ AE + +RA P+P A+ E
Sbjct: 179 DLIASGRTDWTPQDRSQATFFHKRAPQDSHVDWSWPAEVIERFVRAQSDPYPNAFAEFKG 238
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACS-------QGAVRIMRLQRAGG 289
RI++L++ + G G PG V + I +RI R++ G
Sbjct: 239 R----RIRILKASVSRGHYGGTPGRVFIQEDDGMVIVAGPDAWSGKNKGLRIERVRLDDG 294
Query: 290 RVLDIGDFL 298
+F
Sbjct: 295 SEYTAAEFF 303
>gi|303258672|ref|ZP_07344652.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP-BS293]
gi|302640173|gb|EFL70628.1| methionyl-tRNA formyltransferase [Streptococcus pneumoniae
SP-BS293]
Length = 239
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 65/214 (30%), Positives = 113/214 (52%), Gaps = 9/214 (4%)
Query: 102 KLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNI 161
N HASLLPR RG API A++ GD E G+ IM+M K +D G + R +PI+
Sbjct: 29 MDFAVNVHASLLPRHRGGAPIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDED 88
Query: 162 NTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAEN 221
N L ++L+++ +++ + ++ PQ + +T++ I E ++++ ++
Sbjct: 89 NVGTLFEKLALVGRDLLLDTLPAYIAGDIKPEPQDTSQVTFSPNIKPEEEKLDWNKTNRQ 148
Query: 222 VHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA 278
+ N IR ++P+P A + R K+ E+ VEG+G PGE++ +A ++GA
Sbjct: 149 LFNQIRGMNPWPVAHAFLKGD----RFKIYEALPVEGQGNPGEILSIGKKELIVATAEGA 204
Query: 279 VRIMRLQRAGGRVLDIGDFLL--GCPVIIGCIVG 310
+ + ++Q AG +DI FL G + IG G
Sbjct: 205 LSLKQVQPAGKPKMDIASFLNGVGRTLTIGERFG 238
>gi|66045927|ref|YP_235768.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. syringae
B728a]
gi|75501934|sp|Q4ZSZ2|ARNA_PSEU2 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|63256634|gb|AAY37730.1| Formyl transferase, N-terminal:Formyl transferase, C-terminal
[Pseudomonas syringae pv. syringae B728a]
Length = 664
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 73/313 (23%), Positives = 124/313 (39%), Gaps = 11/313 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V + LQAL+ + + I +V+T P K+ +V + +
Sbjct: 1 MSTKAVVFAYHDIGCVGLQALLDAGYEIAAVFTHADDPRE----KTFFGSVAQLCARHGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
E+ D Y ++ +L K N H SLLPR+RG
Sbjct: 57 AVHAPEDPNHPLWVERIGKLAPDFIFSFYYRQLLGDSLLACAKKAALNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G++ETG+ + +M K D GP+ ++V IS+ L +L A +
Sbjct: 117 APANWVLVNGESETGVTLHQMVKRADAGPIVAQQRVSISATDTALTLHGKLRDAAADLLC 176
Query: 180 EAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWL 237
E + L P +PQ E+ TY + + + +++ A ++N IR P+PGA+
Sbjct: 177 ETLPLLAAQGQLPATPQDESRATYFGRRTPADGLIDWSLPATQLYNLIRAVTQPYPGAFC 236
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQR-AGGRVLDIG 295
+ + PG VI+ IAC +G++ I QR G L
Sbjct: 237 PVGDNK--LIVWAASVDTSSNGEAPGTVISHEPLRIACGEGSLVITAGQRGDNGLYLSGE 294
Query: 296 DFLLGCPVIIGCI 308
++ G
Sbjct: 295 QLAREFGLVAGSQ 307
>gi|322833524|ref|YP_004213551.1| NAD-dependent epimerase/dehydratase [Rahnella sp. Y9602]
gi|321168725|gb|ADW74424.1| NAD-dependent epimerase/dehydratase [Rahnella sp. Y9602]
Length = 660
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 70/292 (23%), Positives = 140/292 (47%), Gaps = 13/292 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + LQALV + + + +V+T P S+V ++ E +LP
Sbjct: 1 MKAIVFAYHDIGCVGLQALVDAGYDVQAVFTHTDSP----NENQFFSSVARQGAELNLPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ + D+ Y ++ + IL+ G +N H SLLPR+RG AP
Sbjct: 57 YAPEDVNHPLWVDRIRALQPDIIFSFYYRNMLSEEILSLAPQGGFNLHGSLLPRYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG+ + KM K D G + RKV I+ + L ++ + +
Sbjct: 117 VNWALLNGETETGVTLHKMVKRPDAGDIVGQRKVAITGDDTALKLHAKVREAAKALLTDL 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ +++ N+ L+ Q E+ +Y + + + +++ +SA ++N IR P+PGA+ +
Sbjct: 177 LPEMKAGNITLTVQDESQASYFGRRTAADGEIHWHKSATEINNLIRAVTEPYPGAFSYLG 236
Query: 241 IGNKHERIKLLESQL--VEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGG 289
++ + ++ + + +PG V++ + TIAC +GA+ I+ Q G
Sbjct: 237 ----QRKLTIWRARPLATQHDKQPGTVLSSDPLTIACGEGALEILAGQSENG 284
>gi|157374063|ref|YP_001472663.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shewanella sediminis HAW-EB3]
gi|254806289|sp|A8FRR2|ARNA_SHESH RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|157316437|gb|ABV35535.1| bifunctional polymyxin resistance ArnA protein (polymyxin
resistanceprotein PmrI) [Shewanella sediminis HAW-EB3]
Length = 660
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 62/313 (19%), Positives = 117/313 (37%), Gaps = 13/313 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V A +++L+ + I +V+T +V K A +P
Sbjct: 1 MKAVVFAYHNIGCAAVRSLLEAGVEIAAVFTHVDD----SNENVFFESVAKLAARNGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ D Y ++ Q IL+ G +N H SLLP +RG AP
Sbjct: 57 FAPEDVNHPLWVEKIRQMQPDSIFSFYYRHMLSQEILDIAPKGGFNLHGSLLPNYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I ++ G+ ETG+ + M D G + + I+ A L ++ L + +
Sbjct: 117 INWVLVNGETETGMTLHTMTVKPDAGAIVAQEALAITDADTAATLHSRMTHLAGELLNKV 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNF-CRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ L+ Q +Y + + + + + S + PFPGA+ +
Sbjct: 177 IPQIVAGTHSLTEQDTTKASYFGRRTPADGEIKWANDSRTIFNLIRAVTEPFPGAFSYLG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
R+ + + E + PG ++ T+AC+QG++ + Q G L
Sbjct: 237 ER----RVTIWGATASEKTYDVTPGTIVETKPLTVACAQGSIVLHSGQAENGLYLSGDQL 292
Query: 298 LLGCPVIIGCIVG 310
++ G G
Sbjct: 293 AAEMYLVEGMRFG 305
>gi|198450327|ref|XP_002137071.1| GA26782 [Drosophila pseudoobscura pseudoobscura]
gi|198130987|gb|EDY67629.1| GA26782 [Drosophila pseudoobscura pseudoobscura]
Length = 342
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 91/307 (29%), Positives = 144/307 (46%), Gaps = 27/307 (8%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R++F GT F++ +LQAL + + V T KS + V A+ LP
Sbjct: 37 RILFFGTDNFSLPSLQALHKNCSHNLGVVTS---------FKSPANCVRTYAEREKLPL- 86
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+ + + D+ VVV++G +IP +I+NA G N HASLLP WRGAAPI
Sbjct: 87 -----KRWPITEDQCTDYDLGVVVSFGHMIPAQIINAFPRGMINVHASLLPLWRGAAPII 141
Query: 124 RAIMAGDNETGIAIMKMD-KHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AIM GD TG++IMK++ H D G V R+VPI +I L LS+L A +V+ +
Sbjct: 142 YAIMKGDARTGVSIMKIEPHHFDIGAVLAQREVPIRRDIYMPELHASLSLLGADLLVDTV 201
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ L PQ +YA KI+ T + + + + A + +
Sbjct: 202 NNLSDRLKNAKPQENATASYAPKITSKITEILWTE---LSADELYARHRALYGYKNLTTS 258
Query: 243 NKHERIKLLESQLVEGEG---KPGEV----INPNFTIACSQGA-VRIMRLQRAGGRVLDI 294
++++LLE +L E +PG + I C+QG + +++++ G + +
Sbjct: 259 FLDKQLQLLELRLPEKHLTVQEPGHFSYQRSRKSLLIGCAQGTQLEVLQVRVEGRKPMSA 318
Query: 295 GDFLLGC 301
DF G
Sbjct: 319 QDFSNGF 325
>gi|325674866|ref|ZP_08154553.1| methionyl-tRNA formyltransferase [Rhodococcus equi ATCC 33707]
gi|325554452|gb|EGD24127.1| methionyl-tRNA formyltransferase [Rhodococcus equi ATCC 33707]
Length = 350
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 74/311 (23%), Positives = 134/311 (43%), Gaps = 21/311 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LRV +G + TLQA++ S H +V T P + K +V A E +P
Sbjct: 38 ALRVATLGYQTWGHRTLQAVLDSDHEVVLAITHP--KSDHAYEKMWADSVADLATEHGVP 95
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ K ++ + D+ V + +P+ + +A + G N H SLLP++ G +P
Sbjct: 96 VHIANKPDEDFKAALKAARPDIIVANNWRTWLPRDVFDAPRYGTLNIHDSLLPKYTGFSP 155
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ E G+ MD+ LD G + R P+ N L + ++A
Sbjct: 156 LIWALINGEEEVGLTAHLMDEELDAGDIVLQRSTPVGPNDTVTDLFHRTVDMIGPITLDA 215
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMM 240
+ +E +PQ T+ K S ++R+++ A+ + +RA P+P A+
Sbjct: 216 LALIESGRTDWTPQDRTQATFFHKRSDEDSRIDWTWPADAIERLVRAQSDPYPNAFTTFK 275
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTI--------ACSQGAVRIMRLQRA 287
+RI++L+S + +G G PG V I ++G + I R++
Sbjct: 276 G----QRIRVLKSSVSQGNYGGTPGRVFIHEGDGMVIVAGPDARTGTNKG-LVIERVRLD 330
Query: 288 GGRVLDIGDFL 298
G + +F
Sbjct: 331 DGTEMSGKEFF 341
>gi|312880069|ref|ZP_07739869.1| formyl transferase domain protein [Aminomonas paucivorans DSM
12260]
gi|310783360|gb|EFQ23758.1| formyl transferase domain protein [Aminomonas paucivorans DSM
12260]
Length = 326
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 84/310 (27%), Positives = 140/310 (45%), Gaps = 23/310 (7%)
Query: 10 TSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLG 69
+ F L+ L+ + + V P+P+G RGLK V + A++ +LP +
Sbjct: 12 SGPFGALWLEELLRLGATPLWVVCGAPKPSG-RGLKMHPLPVEEVARKGNLPLFSSPRPE 70
Query: 70 QEEYEQFLSFN--------ADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+E V VV G VI + +L+ G N H SLLP RGAAP
Sbjct: 71 EEALRLCSEPQGSDPGASLPQVLFVVDCGRVIREPLLSLPPQGCVNLHPSLLPDLRGAAP 130
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I R+++ GD TG + ++ + +D GPV + + + S + L + L A + A
Sbjct: 131 IPRSLLRGDQTTGTTLFRLVEGMDAGPVFAQQTLTVDSEDDAETLSKRL---AALSARLA 187
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
D L+ +PQ E+ T A KI ETR+++ R A + IRA SP PGAW
Sbjct: 188 WDFLQNPPASPTPQDESKATQAPKILPHETRLSWGRPACEIGWAIRAFSPRPGAWT---- 243
Query: 242 GNKHERIKLLESQLVEG-----EGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
++ +R+++L + + PG++ + C GA+ ++ +Q G +
Sbjct: 244 LHRGKRLRILRATPLAPEELPVSLLPGQIHLAPKAPVVFCGSGALALLSVQPEGKAPMSA 303
Query: 295 GDFLLGCPVI 304
D++ G +
Sbjct: 304 QDWIHGGRLR 313
>gi|259909155|ref|YP_002649511.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Erwinia pyrifoliae Ep1/96]
gi|224964777|emb|CAX56295.1| Bifunctional polymyxin resistance protein ArnA [Erwinia pyrifoliae
Ep1/96]
gi|283479190|emb|CAY75106.1| Bifunctional polymyxin resistance protein arnA [Erwinia pyrifoliae
DSM 12163]
Length = 659
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 68/310 (21%), Positives = 135/310 (43%), Gaps = 9/310 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + L+AL + + I +V+T A ++V + A + +P
Sbjct: 1 MKAVVFAYHDIGCTGLRALAEAGYQIAAVFTHADNAAENH----FFASVARTATQLGVPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ S DV Y ++ I+N+ G +N HASLLP++RG AP
Sbjct: 57 YAPEDVNHPLWIDRIRSMAPDVIFSFHYRHMLNDAIINSASRGAFNLHASLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +KVPI+ + L ++ +
Sbjct: 117 LNWVLVNGEQETGVTLHRMVKQADAGAIIAQKKVPIADRDDALTLHHKVCAAAGELLAIT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N PQ E+ +Y + + + R+++ A+ +HN +R P+PGA+ +
Sbjct: 177 LPDMQSGNDVGHPQDESLASYVGRRTPEDGRIDWRLPAQRIHNLVRAVTDPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
G + + +PG +++ +ACS GA+ I+ Q G +
Sbjct: 237 SGKFIVWQS--KVRHDCPANRPGTILSVAPLVVACSAGALEIVTGQSDSGIYMQGSQLAQ 294
Query: 300 GCPVIIGCIV 309
++ G ++
Sbjct: 295 TLGLVAGALL 304
>gi|315928853|gb|EFV08116.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
jejuni 305]
Length = 299
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 80/311 (25%), Positives = 139/311 (44%), Gaps = 22/311 (7%)
Query: 8 MGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--SLPALV 64
MGT +A L+ALV + + +V+++TQP + G R S + S+P
Sbjct: 1 MGTPSYATCILKALVENENFKLVALFTQPDKAVG-RKQILTPSDTKAFLSQNYPSIPIFT 59
Query: 65 PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
P+ L + + + +VVA I N HASLLP++RGA+PIQ
Sbjct: 60 PSSLKDKNIIREIKDLNPDFIVVAAYGKILP-KAILDLAPCVNLHASLLPKYRGASPIQS 118
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
AI+ D ++G+ M M++ LDTG + + I ++ + ++ +
Sbjct: 119 AILNKDEKSGVCTMLMEEGLDTGAILESLECDIKDKNSSEVFELLANLAAKIIL----ST 174
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
L + + E + + K E + ++A ++ A +P+PG +LE +
Sbjct: 175 LLNFDKITPKKQEESLATLCRKIKKEDGLINLQNARELYQKYLAFTPWPGVFLENGL--- 231
Query: 245 HERIKLLESQLVEG---EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
K LE +LV+ K GE++ +F +AC QG +RI +LQ +G + LD +L
Sbjct: 232 ----KFLELELVDELKQNAKMGEILELEKESFLLACKQGVLRIKKLQESGKKALDGRTYL 287
Query: 299 LGCPVIIGCIV 309
G + +
Sbjct: 288 NGKRLKSEDSL 298
>gi|255023003|ref|ZP_05294989.1| methionyl-tRNA formyltransferase [Listeria monocytogenes FSL
J1-208]
Length = 214
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 77/216 (35%), Positives = 122/216 (56%), Gaps = 4/216 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L+ L ++++ +V+V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPEFSVPVLKQL-ANTYDVVAVVTQPDRPVG-RKRVLTPPPVKKAALELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E E+ ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELEELIALKADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G ETG+ IM M + LD G + RK+PI+ NT + +LS L A ++
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSKLGAELLM 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNF 215
+ + + PQ +T+A IS+ + ++++
Sbjct: 178 DTLPDFLAGKITAIPQDPEKVTFARNISREQEKIDW 213
>gi|229494495|ref|ZP_04388258.1| formyl transferase [Rhodococcus erythropolis SK121]
gi|229318857|gb|EEN84715.1| formyl transferase [Rhodococcus erythropolis SK121]
Length = 311
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 73/309 (23%), Positives = 126/309 (40%), Gaps = 19/309 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV +G + TLQAL+ S H +V T P + + +V A E +P
Sbjct: 1 MRVATLGYQTWGHRTLQALIDSDHEVVLAITHP--KSEHVYEQMWADSVADLAAENGVPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
V K D+ V + +P + +A K G N H SLLP++ G +P+
Sbjct: 59 HVANKPDDAFKAALAEAAPDIIVANNWRTWLPAEVFDAPKYGTLNIHDSLLPKYTGFSPL 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ E G+ MD+ LD G + R + L + ++A+
Sbjct: 119 IWALINGEEEVGLTAHLMDEELDAGDIVLQRSTTVGPTDTVTDLFHRTIDMIGPITLDAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMMI 241
D + +PQ + T+ K + ++ V++ AE + +RA P+P A+ E
Sbjct: 179 DLIASGRTDWTPQDRSQATFFHKRAPQDSHVDWSWPAEVIERFVRAQSDPYPNAFAEFKG 238
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACS-------QGAVRIMRLQRAGG 289
+RI++L++ + G G PG V + I +RI R++ G
Sbjct: 239 ----QRIRILKASVSRGHYGGIPGRVFIQEDDGMVIVAGPDAWSGKNKGLRIERVRLDDG 294
Query: 290 RVLDIGDFL 298
+F
Sbjct: 295 SEYTAAEFF 303
>gi|312138226|ref|YP_004005562.1| methionyl-tRNA formyltransferase [Rhodococcus equi 103S]
gi|311887565|emb|CBH46877.1| putative methionyl-tRNA formyltransferase [Rhodococcus equi 103S]
Length = 356
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 133/311 (42%), Gaps = 21/311 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LRV +G + TLQA++ S H +V T P + K +V A E +P
Sbjct: 44 ALRVATLGYQTWGHRTLQAVLDSDHEVVLAITHP--KSDHAYEKMWADSVADLATEHGVP 101
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ K ++ + D+ V + +P+ + +A + G N H SLLP++ G +P
Sbjct: 102 VHIANKPDEDFKAALKAARPDIIVANNWRTWLPRDVFDAPRYGTLNIHDSLLPKYTGFSP 161
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ E G+ MD+ LD G + R P+ L + ++A
Sbjct: 162 LIWALINGEEEVGLTAHLMDEELDAGDIVLQRSTPVGPKDTVTDLFHRTVDMIGPITLDA 221
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMM 240
+ +E +PQ T+ K S ++R+++ A+ + +RA P+P A+
Sbjct: 222 LALIESGRTDWTPQDRTQATFFHKRSDEDSRIDWTWPADAIERLVRAQSDPYPNAFTTFK 281
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTI--------ACSQGAVRIMRLQRA 287
+RI++L+S + +G G PG V I ++G + I R++
Sbjct: 282 G----QRIRVLKSSVSQGNYGGTPGRVFIHEGDGMVIVAGPDARTGTNKG-LVIERVRLD 336
Query: 288 GGRVLDIGDFL 298
G + +F
Sbjct: 337 DGTEMSGKEFF 347
>gi|256789951|ref|ZP_05528382.1| formyltransferase [Streptomyces lividans TK24]
gi|289773833|ref|ZP_06533211.1| formyltransferase [Streptomyces lividans TK24]
gi|289704032|gb|EFD71461.1| formyltransferase [Streptomyces lividans TK24]
Length = 315
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 77/310 (24%), Positives = 134/310 (43%), Gaps = 20/310 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TL+AL+ S H +V V T P + K +V A+E +P
Sbjct: 1 MRVVMFGYQTWGHRTLRALLDSEHDVVLVVTHP--RSEHAYEKIWSDSVADLAEEHGVPV 58
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L+ + +E + L + D+ V + IP RI + G N H SLLP++ G +P
Sbjct: 59 LIRNRPDDDELFERLKDADPDIIVANNWRTWIPPRIFGLPRHGTLNVHDSLLPKYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ E G+ M+ LD G + VP+ L + L A V A
Sbjct: 119 LIWALINGETEVGVTAHMMNDELDAGDIVRQEAVPVGPADTATDLFHKTVDLIAPVTVGA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMM 240
+ + + Q + ++ K S + R+++ AE++ +RA P+P A+
Sbjct: 179 LGLIASGQTEFTKQDRSRASFFHKRSAEDIRIDWNWPAEDLERLVRAQSEPYPSAFTF-- 236
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAG 288
++ R+++L + + EG G PG + I A + I R++
Sbjct: 237 --HRGRRLEILAAVVSEGRYGGTPGRIFYREGEGVVIVAGADARRGRNHGLAITRVRTED 294
Query: 289 GRVLDIGDFL 298
GR L ++
Sbjct: 295 GRELAATEYF 304
>gi|242241410|ref|YP_002989591.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Dickeya dadantii Ech703]
gi|242133467|gb|ACS87769.1| NAD-dependent epimerase/dehydratase [Dickeya dadantii Ech703]
Length = 660
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 68/312 (21%), Positives = 134/312 (42%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + L+AL ++ ++I +V+T P+ + +V + A E +P
Sbjct: 1 MKAVVFAYHDLGCVGLRALAAAGYTIEAVFTHADNPSENQ----FFGSVARTAAELGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ + D+ Y ++ IL G +N H SLLPR+RG AP
Sbjct: 57 FAPEDVNHPLWVERIAAMAPDMIFSFYYRNLLSDDILRCAPHGAFNLHGSLLPRYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG+ + +M D G + ++V I L +L A + +A
Sbjct: 117 LNWALVNGETETGVTLHRMVSRADAGNIVAQQQVAIDDADTALSLHHKLRESAAQLLAQA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + + Q E+ TY + + + R+ + + A ++N +R P+PGA+ +
Sbjct: 177 LPAIAAGRVEEHAQDESLATYVGRRTPEDGRLEWQKPARTLYNLVRAVTEPWPGAFSFVG 236
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + ++++ KPG V++ + +AC A+ I+ Q G L
Sbjct: 237 TT----KFIVWQAKVRTDFAAAKPGTVLSTSPLVVACGSDALEIVTGQGDSGIYLQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G I+
Sbjct: 293 AQSLGLVTGAIL 304
>gi|300722790|ref|YP_003712081.1| putative formyltransferase [Xenorhabdus nematophila ATCC 19061]
gi|297629298|emb|CBJ89897.1| putative formyltransferase [Xenorhabdus nematophila ATCC 19061]
Length = 673
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 67/288 (23%), Positives = 125/288 (43%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + L AL + I +V+T P S+V + + LP
Sbjct: 1 MKAVIFAYHDIGCVGLSALAKAGFDIQAVFTHTDDPNENH----FFSSVARTGADLGLPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ DV Y ++ Q IL+ + G +N H SLLP++RG AP
Sbjct: 57 FAPENVNHPLWVERIREMKPDVIFSFYYRNMLSQEILSLAEKGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG+ + KM D G + + V I + + + +
Sbjct: 117 VNWAVLHGEKETGVTLHKMLAKPDAGDIIAQKAVQIGETDTSLSVHANIREAAVELLDSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ +++ + P PQ EN TY + + + + + + A+ ++N +R P+PGA+ +
Sbjct: 177 LPQIKSGHYPSIPQNENLATYFGRRTAEDGEIIWRKPAKEINNLVRAVTEPYPGAFTFLG 236
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRIMRLQ 285
+I + ++ ++ + +PG VI+ F IAC G + I+ Q
Sbjct: 237 ER----KIIIWRARPLDQAHDKRPGTVISTEPFVIACGDGTLEIISGQ 280
>gi|45550868|ref|NP_651857.2| CG1750, isoform A [Drosophila melanogaster]
gi|45446725|gb|AAF57138.2| CG1750, isoform A [Drosophila melanogaster]
Length = 342
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 85/307 (27%), Positives = 145/307 (47%), Gaps = 27/307 (8%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+++F GT F++ +LQAL + + V T KS + V A++ LP
Sbjct: 37 KILFFGTDNFSLPSLQALHKNCGDRLGVVTS---------FKSPANCVRTYAEKEKLPL- 86
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+ + + D+ VVV++G +IP I+N G N HASLLP+WRGAAPI
Sbjct: 87 -----QKWPIDPSVCPQFDLGVVVSFGHLIPGSIINGFPYGMINVHASLLPKWRGAAPII 141
Query: 124 RAIMAGDNETGIAIMKMDKH-LDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AIM GD TG++IMK++ H D G + R+V I+ ++ L L+ L A +V+ +
Sbjct: 142 YAIMKGDASTGVSIMKIEPHRFDIGDILAQREVAINPDVFMPDLHASLASLGAELLVDTI 201
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ L PQ + ++YA KI+ T + + I + +
Sbjct: 202 NNLSVRLKEAKPQDSSRVSYAPKITSKITEIIWSE---LSAIEIYTRHRALYGYKNLTTN 258
Query: 243 NKHERIKLLESQLVEGE---GKPGEVI----NPNFTIACSQGA-VRIMRLQRAGGRVLDI 294
++++LLE +L E +PG + + + I C+Q + + +++L+ G + +
Sbjct: 259 FLGKQVQLLELRLPEKRVPVQEPGAISYLRKSRSLIIGCAQQSQLEVLQLRVEGRKPMSA 318
Query: 295 GDFLLGC 301
DF G
Sbjct: 319 QDFNNGF 325
>gi|297841273|ref|XP_002888518.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334359|gb|EFH64777.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 355
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 76/318 (23%), Positives = 141/318 (44%), Gaps = 26/318 (8%)
Query: 5 VVFMGTSEFAVATLQALVS------SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
++F+G+ + +V L+AL + SS + + TQPP RG K + S V + A +
Sbjct: 27 LIFLGSPQVSVTVLEALFNASAAPNSSFEVAGIVTQPPSRR-DRGRKVLPSPVAQYALDK 85
Query: 59 SLP----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
LP + ++ + AYG ++P + L G N H SLLP
Sbjct: 86 GLPSDLIFSPEKAGDEAFLSALRELQPELCITAAYGNILPTKFLKIPLHGTVNIHPSLLP 145
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
+RGAAP+QRA+ G ETG+++ + LD GPV ++ + I L L
Sbjct: 146 LYRGAAPVQRALQDGVPETGVSLAFTVRKLDAGPVIASKRFQVDDLIKAPELLSFLFSEG 205
Query: 175 AHAMVEAMDKLEQNNLPLS--PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ ++ + + + PQ ++ T A KI+ E ++F A +HN +RA + +
Sbjct: 206 SKLLIRELPSIFDGSAKSKAAPQDDSKATLAPKIAPDEAWLSFDEEAFVLHNKVRAFAGW 265
Query: 233 PGAWLEMMI------GNKHERIKLLESQLVEG-EGKPG-----EVINPNFTIACSQG-AV 279
PG ++++ +K++ +++ + E + G + C G A+
Sbjct: 266 PGTRAKVVVLDDKSGQQNVLELKIMSTRVCKDLEIQDGGQDYVTFKKGSLVFPCGGGTAL 325
Query: 280 RIMRLQRAGGRVLDIGDF 297
++ +Q G + ++ F
Sbjct: 326 EVLEVQLPGKKAINAAAF 343
>gi|148377891|ref|YP_001256767.1| methionyl-tRNA formyltransferase [Mycoplasma agalactiae PG2]
gi|148291937|emb|CAL59328.1| Methionyl tRNA formyltransferase [Mycoplasma agalactiae PG2]
Length = 279
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 71/292 (24%), Positives = 147/292 (50%), Gaps = 15/292 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++ GT EFAV + ++++ ++V + +QP +P +RG + AQ++++
Sbjct: 1 MKILLAGTPEFAVPIFEKIINN-FTVVGIVSQPDKP-NQRGRVLTSTPTKALAQKYNIRC 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + ++ + + D V A+G +IP +L K N H S+LP++RGAAP+
Sbjct: 59 F-QPEKIGQIADELRALDYDYLVTAAFGQLIPTSVLQIAKKLNLNVHGSILPKYRGAAPV 117
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
Q A++ D TG+++M+M K +D G V + IS + L +++S+L A +VE +
Sbjct: 118 QHALLNNDKTTGVSLMEMVKAMDAGDVFAKIEFEISETDVASSLLKKISLLTADHIVEWL 177
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+K+++ L Q ++ +T++ K++K + + + + + IRA PGA+ +
Sbjct: 178 NKIDKGELAREVQDKSKVTFSPKLNKEDAEITKDFTCDQAISKIRAYEYNPGAFAYI--- 234
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+R+KL + +V+ + S G + + Q + + I
Sbjct: 235 -NGKRVKLFFAIK--------KVVKAGIKLELSDGVIYAVDYQFDSKKRVKI 277
>gi|288922804|ref|ZP_06416971.1| formyl transferase domain protein [Frankia sp. EUN1f]
gi|288345847|gb|EFC80209.1| formyl transferase domain protein [Frankia sp. EUN1f]
Length = 315
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 72/309 (23%), Positives = 123/309 (39%), Gaps = 18/309 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP- 61
+RVV G + TLQAL+ S H + V T + K +V A E +P
Sbjct: 1 MRVVMFGYQTWGHRTLQALLDSHHDVALVVTHE--KSDHAYEKIWDDSVADLATEHGVPV 58
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L ++ + D V + IP ++ N +LG N H SLLP + G AP
Sbjct: 59 VLRNRPDDEDLLSLLKETDPDAIVATNWRTWIPPQVFNLPRLGTLNIHDSLLPAYAGFAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ E G+ M LD G V +VP+ T L L VE
Sbjct: 119 LIWALINGEPEVGVTAHIMSDELDAGDVVLQHRVPVGPRDTTTDLFHRTLALFGPMAVEG 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + +PQ + ++ K S+ ++ +++ +AE + +RA +
Sbjct: 179 LDLMASGRTDWAPQDRSKASFFHKRSERDSLIDWTWTAEELDRLVRAQ---CDPYPNAFT 235
Query: 242 GNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGA-------VRIMRLQRAGG 289
ER++++ +++ G G PG + I A + + ++ G
Sbjct: 236 YRNGERVRIVSAEVSNGYYGGTPGRIFIREGDGVVIVAGAQARHGRSHGLLVRTVRLDDG 295
Query: 290 RVLDIGDFL 298
R L D+
Sbjct: 296 RELAAADYF 304
>gi|296105191|ref|YP_003615337.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295059650|gb|ADF64388.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 660
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 62/288 (21%), Positives = 128/288 (44%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + A L AL+ + + I +++T P G + +V + A E +P
Sbjct: 1 MKAVVFAYHDMGCAGLLALLEAGYDIAAIFTHPDAA----GENNFFGSVARIAAERGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ DV Y +I IL G +N H SLLP +RG AP
Sbjct: 57 YAPDDINHPLWVDRIRDTAPDVIFSFYYRNLICDDILRLATKGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M D G + ++V I ++ L Q+L + + +A
Sbjct: 117 LNWVLVNGETETGVTLHRMVHRADAGAIIAQQRVAIDADETALQLHQKLCSVAQSLLRDA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + + Q E+ + + + + R+++ + A +HN +R P+PGA+
Sbjct: 177 LPTILNGTFSETAQDESKASCFGRRTPEDGRLDWNKPARQLHNLVRAVTDPWPGAYSFAG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQ 285
+ + + +S++ + KPG +++ + ++C + A+ I+ Q
Sbjct: 237 VS----KFIVWKSRVRDDVPAAKPGTIVSVSPLIVSCGEQALEIVTGQ 280
>gi|326781172|ref|ZP_08240437.1| Methionyl-tRNA formyltransferase [Streptomyces cf. griseus
XylebKG-1]
gi|326661505|gb|EGE46351.1| Methionyl-tRNA formyltransferase [Streptomyces cf. griseus
XylebKG-1]
Length = 315
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 80/310 (25%), Positives = 136/310 (43%), Gaps = 20/310 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TLQAL+ S H++V V T P + K +V A+E +P
Sbjct: 1 MRVVMFGYQTWGHRTLQALLDSEHTVVLVVTHP--KSEHAYEKIWSDSVADLAEEHGVPV 58
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L+ + EE + L D+ V + IP RI + G N H SLLP++ G +P
Sbjct: 59 LIRERPDDEELFERLKEADADIIVANNWRTWIPPRIFGLPRHGTLNVHDSLLPKYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G++E G+ MD+ LD G + + + L L A + A
Sbjct: 119 LIWALINGESEVGVTAHLMDEELDAGDIVRQEAIAVGPTDTATDLFHRTVDLIAPVTIGA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS-PFPGAWLEMM 240
+D + +PQ + T+ K + + R+++ AE++ IRA S P+P A+
Sbjct: 179 LDLIASGQTEFTPQDRSRATFFHKRAAEDIRIDWNWPAEDLERLIRAQSAPYPSAFTF-- 236
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAG 288
++ R+++L + + + G PG V I A + I R++
Sbjct: 237 --HRGRRLEVLSAVVSQNRYGGTPGRVFYREGEGVVIVAGADARTGRNHGLAITRVRTED 294
Query: 289 GRVLDIGDFL 298
GR L ++
Sbjct: 295 GRELPATEYF 304
>gi|195388632|ref|XP_002052983.1| GJ23627 [Drosophila virilis]
gi|194151069|gb|EDW66503.1| GJ23627 [Drosophila virilis]
Length = 345
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 86/307 (28%), Positives = 142/307 (46%), Gaps = 25/307 (8%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+V+F GT F++ +L+ L + + V T KS + V A+ L
Sbjct: 37 KVLFFGTDNFSLPSLKKLHQNKLDVT-VVTS---------FKSPANCVRSYAEAQKLSIY 86
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
++ + ++ VVV++G +IP I+NA G N HASLLPRWRGAAPI
Sbjct: 87 RWPISVEQC------ADFELGVVVSFGHMIPLHIINALPRGIINVHASLLPRWRGAAPIM 140
Query: 124 RAIMAGDNETGIAIMKMD-KHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AIM GD +TGI+IMK++ D GP+ R++PI SN+ L LS L A +V+ +
Sbjct: 141 YAIMEGDTKTGISIMKIEPHQFDIGPILAQREIPIKSNVYMPELHDALSQLGADLLVDTI 200
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ LE+ L PQ + +YA KI+ T +++C +
Sbjct: 201 NDLEERLLKAKPQNDTEASYAPKITSRITAIDWCEQTAMELFARHRALYGFKNLTTTLQD 260
Query: 243 NKHERIKLLESQL---VEGEGKPGEV----INPNFTIACSQGA-VRIMRLQRAGGRVLDI 294
++L + +L PG + + + + C++G + +++L+ G + +
Sbjct: 261 RTVYLLELKQPELQLSASPNPAPGYIYYNRVRKSLIVGCARGTQLEVLQLRIEGKKPMSA 320
Query: 295 GDFLLGC 301
DF G
Sbjct: 321 HDFNNGF 327
>gi|194741962|ref|XP_001953478.1| GF17200 [Drosophila ananassae]
gi|190626515|gb|EDV42039.1| GF17200 [Drosophila ananassae]
Length = 342
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 79/304 (25%), Positives = 135/304 (44%), Gaps = 21/304 (6%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+++F GT F++ +LQAL + + V T KS + V A++ +P
Sbjct: 37 KILFFGTDNFSLPSLQALHRNCGDGLGVVTS---------FKSPANCVRSYAEQQKIPL- 86
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+ D+ VVV++G +IP I+ A G N HASLLPRWRGAAPI
Sbjct: 87 -----QRWPINSAQCTGFDLGVVVSFGHLIPANIIGAFPSGMINVHASLLPRWRGAAPII 141
Query: 124 RAIMAGDNETGIAIMKMDKH-LDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AIM GD+ TG++IMK++ H D G + R++ I S++ L L++L A +V+ +
Sbjct: 142 YAIMNGDSSTGVSIMKIEPHRFDIGDILAQREMTIKSDVYMPELHTSLALLGADLLVDTV 201
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
L +PQ ++A KI+ T V + + + +
Sbjct: 202 KNLTDRLKNATPQDNAIASHAPKITANVTEVIWSKHTALQIHTRYRALFGYKNLTTSFLE 261
Query: 243 NKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
+ + + + KPG + I C++ + + +++L+ G + + DF
Sbjct: 262 KQVQFLDIRLPDQPLPLLKPGSFSYHRKRKSLLIGCAEESQIEVLQLRIEGRKPMSAQDF 321
Query: 298 LLGC 301
G
Sbjct: 322 NNGF 325
>gi|328954479|ref|YP_004371813.1| Methionyl-tRNA formyltransferase [Desulfobacca acetoxidans DSM
11109]
gi|328454803|gb|AEB10632.1| Methionyl-tRNA formyltransferase [Desulfobacca acetoxidans DSM
11109]
Length = 316
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 75/318 (23%), Positives = 127/318 (39%), Gaps = 14/318 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVS----SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
+R++FMG S L+ L+ +IV+V T P + +V + A
Sbjct: 1 MRLLFMGYSNIGHTCLKVLIDLCRQLDDNIVAVVTHEDNPQE----QIWFRSVQELALAH 56
Query: 59 SLPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+LP P E+ + L D Y ++ + ILN G N H SLLPR+R
Sbjct: 57 NLPVYTPEDPNNPEFVELLRGLAPDFIFSCYYRKMLKKAILNIPPKGALNLHGSLLPRYR 116
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
G PI ++ G+ TG+ + M++ D G + +VPI L ++++
Sbjct: 117 GRCPINWVLLHGEPLTGLTLHYMEEKPDYGDMVAQVQVPIIPEDTALTLSDKMAIAAGTL 176
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAW 236
M + L + P Q N TY + R+++ + A ++N IR PFPGA+
Sbjct: 177 MRQVYPLLRVDLAPRIMQDHNRATYFGGRKPEDGRIDWEQPAVQIYNLIRAVTHPFPGAF 236
Query: 237 LEMMIGNKHERIKLLESQLVEGEGKPGEV-IN---PNFTIACSQGAVRIMRLQRAGGRVL 292
+ + +PGEV ++ I QG + ++ Q G +
Sbjct: 237 TFWRGKRLFLWAGRPKPENQGPLLQPGEVALDSAAQQLVIGAGQGRLAVIAAQLEGSPEV 296
Query: 293 DIGDFLLGCPVIIGCIVG 310
+ + G I+G
Sbjct: 297 VGEALVQQLGFLAGEILG 314
>gi|194904988|ref|XP_001981097.1| GG11873 [Drosophila erecta]
gi|190655735|gb|EDV52967.1| GG11873 [Drosophila erecta]
Length = 325
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 89/309 (28%), Positives = 144/309 (46%), Gaps = 27/309 (8%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+++F GT F++ +LQAL + + V T K+ + V A++ LP
Sbjct: 18 PLKILFFGTDYFSLPSLQALHKNCGDHLGVVTS---------FKNPANCVRTYAEKEKLP 68
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ + + D+ VVV++G +IP I++ G N HASLLPRWRGAAP
Sbjct: 69 L------QKWPIDPSVCPKFDLGVVVSFGHLIPANIIHGFPNGMINVHASLLPRWRGAAP 122
Query: 122 IQRAIMAGDNETGIAIMKMDKH-LDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
I AIM GD TG++IMK++ H D G + R+V I N+ L L+ L A +V+
Sbjct: 123 IIYAIMKGDAITGVSIMKIEPHRFDIGAILAQREVAIEPNVFMPDLHASLASLGADLLVD 182
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ L PQ +YA KI+ T VN+ I + +
Sbjct: 183 TVNNLSVRLKEAKPQDSTKTSYAPKITSKITEVNWSE---LSALDIYTRHRALFGYKNLT 239
Query: 241 IGNKHERIKLLESQLVEGEG---KPGEVI----NPNFTIACSQGA-VRIMRLQRAGGRVL 292
++++LLE +L E E +PG + + I C+Q + + +++L+ G + +
Sbjct: 240 TSFLSKQVQLLEVRLPEKELPFQEPGAISYLRKARSLVIGCAQHSQLEVLQLRVEGRKPM 299
Query: 293 DIGDFLLGC 301
DF G
Sbjct: 300 SAQDFNNGF 308
>gi|170024072|ref|YP_001720577.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pseudotuberculosis YPIII]
gi|226723730|sp|B1JJ30|ARNA_YERPY RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|169750606|gb|ACA68124.1| NAD-dependent epimerase/dehydratase [Yersinia pseudotuberculosis
YPIII]
Length = 667
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 71/292 (24%), Positives = 133/292 (45%), Gaps = 17/292 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + L AL + + I +V+T P R S+V + A + +LP
Sbjct: 1 MKAIVFAYHDIGCVGLNALAEAGYDIQAVFTHTDNPGENR----FFSSVARVAADLALPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ D+ Y ++ IL+ G +N H SLLP++RG AP
Sbjct: 57 FAPEDVNHPLWVERIRELQPDIIFSFYYRNMLSDEILSLAPQGGFNLHGSLLPQYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I ++ G+ ETG+ + +M K D GP+A KV IS L ++ +
Sbjct: 117 INWVLVNGETETGVTLHQMVKKADAGPIAGQYKVAISDVDTALTLHAKMRDAAQELLRNL 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++++ LPL+PQ E +Y + + + +++ +SA ++N +R P+PGA+ +
Sbjct: 177 LPRMKEGPLPLTPQKEADASYFGRRTAADGEIHWQKSAFTINNLVRAVTEPYPGAFSYLG 236
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRIMRLQRAGG 289
++ + S+ ++ PG V++ T+AC +GA+ I+ G
Sbjct: 237 ----QRKLTIWRSRPLDLVHNKLPGTVLSTAPLTVACGEGALEIIT----GK 280
>gi|148265717|ref|YP_001232423.1| putative formyltransferase [Geobacter uraniireducens Rf4]
gi|146399217|gb|ABQ27850.1| formyl transferase domain protein [Geobacter uraniireducens Rf4]
Length = 308
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/286 (20%), Positives = 112/286 (39%), Gaps = 10/286 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R++ L+ L+ + ++T P + +V K A++ +P
Sbjct: 6 RIIVCAYHNVGYHCLEELLRQGAEVAMLFTHEDSPTE----EIWFKSVRKLAEKHGIPFR 61
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
D + Y +I Q +L G N H S LP++RG P+
Sbjct: 62 TSDINEPANIALLRELRPDFIISFYYRNMIRQEVLAIPVRGALNLHGSYLPKYRGRVPVN 121
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
A++ G+ ETG + M + D G + KV I+ + + +++ + A
Sbjct: 122 WAVINGETETGATLHYMVEKPDAGDIVDQEKVAIAFADSAFDVFNKVTDAAVTVIRRAWP 181
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIG 242
+L P P +Y + +++ + A ++N IR P+PGA+ +
Sbjct: 182 RLTAGTAPRIPMDLTAGSYFGGRKPADGLIDWTKGAVQIYNLIRGVTHPYPGAFTYL--- 238
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRA 287
++I + ++ VEG G PG +++ + G ++I LQ
Sbjct: 239 -DGKKIVIWQAWPVEGIGGPGCIVSAEPLLVGTGDGLLQIKSLQAE 283
>gi|294633564|ref|ZP_06712122.1| methionyl-tRNA formyltransferase [Streptomyces sp. e14]
gi|292830206|gb|EFF88557.1| methionyl-tRNA formyltransferase [Streptomyces sp. e14]
Length = 315
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 76/309 (24%), Positives = 128/309 (41%), Gaps = 18/309 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP- 61
+RVV G + TLQAL+ S H +V V T P + K +V A E +P
Sbjct: 1 MRVVMFGYQTWGHRTLQALLDSPHEVVMVVTHP--KSEHAYEKIWSDSVADLAAEHGVPV 58
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ +E + + D+ V + IP RI + G N H SLLP++ G +P
Sbjct: 59 VIRNRPDDEELFTLLKEADPDIIVANNWRTWIPPRIFGLPRHGTLNVHDSLLPKYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ E G+ MD LD G + R VP+ L + L A A
Sbjct: 119 LIWALINGEREVGVTAHMMDDELDAGDIVLQRAVPVGPKDTATDLFHKTVDLIAPVTTGA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + +PQ + T+ K ++ + R+++ AE++ IRA +
Sbjct: 179 LDLIASGQTEFTPQDRSQATFFHKRAEDDIRIDWTWPAEDLERLIRAQ---SAPYPPAFT 235
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAGG 289
+K R+++L + + + G PG + I A + I R++ G
Sbjct: 236 HHKGRRLEVLGAVVSQNRYGGTPGRIFYREGEGVVIVAGADARTGRNHGLAITRVRTDDG 295
Query: 290 RVLDIGDFL 298
R L ++
Sbjct: 296 RELPATEYF 304
>gi|317491942|ref|ZP_07950376.1| NAD dependent epimerase/dehydratase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920063|gb|EFV41388.1| NAD dependent epimerase/dehydratase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 660
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 73/307 (23%), Positives = 140/307 (45%), Gaps = 19/307 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + A L+AL + + I +V+T P G +V + A E +LP
Sbjct: 1 MKAIVFAYHDIGCAGLKALKEAGYEISAVFTHTDEP----GENHFYGSVARVAAEMALPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ + DV Y ++ Q IL+ G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVDRIKALKPDVIFSFYYRNMLSQDILDIAPRGSWNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ +TG+ + +M + D G +A V ISS+ L ++ + +
Sbjct: 117 VNWALVHGETQTGVTLHQMTRKADAGDIAGQLAVEISSDDTALTLHSKIRDAAVALLGQQ 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++ + Q E+ TY + + + +++ + A VHN +R P+PGA+ +
Sbjct: 177 LPLIKNGDVKTTAQDESQATYFGRRTAADGLIDWSKPASTVHNLVRAVTEPYPGAFSYLG 236
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+I + S++VE + +PG V++ IAC + A+ I+ Q D G +
Sbjct: 237 DR----KITVWRSRIVEDKSGSRPGTVLSAKPLVIACGENALEIVTGQS------DAGLY 286
Query: 298 LLGCPVI 304
G +
Sbjct: 287 AQGSQLA 293
>gi|148669254|gb|EDL01201.1| mCG129115 [Mus musculus]
Length = 476
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 71/316 (22%), Positives = 122/316 (38%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCQLRKEGHEVVGVFTIPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ ++ + A++ V+ IP ++NA + G H SLLPR
Sbjct: 54 FKFPRWRARGQALPEVVAKYQALGAELNVLPFCSQFIPMEVINAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFTIFWADDGLDTGDLLLQKECDVLPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K +N+ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGTAPRRPQPEEGATYEGIQKKETAMINWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L E+ + G +PG V + + + + +Q
Sbjct: 234 WTEACGQKLTFFNSTLNTSGLVAQGEALPIPGAHRPGLVTKAGLILFGNDDRMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ F G
Sbjct: 294 LEDGKMMPASQFFKGS 309
>gi|23271467|gb|AAH24055.1| Aldh1l1 protein [Mus musculus]
Length = 902
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 71/316 (22%), Positives = 122/316 (38%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCQLRKEGHEVVGVFTIPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ ++ + A++ V+ IP ++NA + G H SLLPR
Sbjct: 54 FKFPRWRARGQALPEVVAKYQALGAELNVLPFCSQFIPMEVINAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFTIFWADDGLDTGDLLLQKECDVLPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K +N+ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGTAPRRPQPEEGATYEGIQKKETAMINWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L E+ + G +PG V + + + + +Q
Sbjct: 234 WTEACGQKLTFFNSTLNTSGLVAQGEALPIPGAHRPGLVTKAGLILFGNDDRMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ F G
Sbjct: 294 LEDGKMMPASQFFKGS 309
>gi|27532959|ref|NP_081682.1| aldehyde dehydrogenase family 1 member L1 [Mus musculus]
gi|24418394|sp|Q8R0Y6|AL1L1_MOUSE RecName: Full=Aldehyde dehydrogenase family 1 member L1; AltName:
Full=Cytosolic 10-formyltetrahydrofolate dehydrogenase;
Short=10-FTHFDH; Short=FDH
gi|19684151|gb|AAH25939.1| Aldehyde dehydrogenase 1 family, member L1 [Mus musculus]
gi|20380027|gb|AAH28817.1| Aldh1l1 protein [Mus musculus]
gi|21314984|gb|AAH30722.1| Aldehyde dehydrogenase 1 family, member L1 [Mus musculus]
gi|21314994|gb|AAH30730.1| Aldehyde dehydrogenase 1 family, member L1 [Mus musculus]
gi|21315003|gb|AAH30723.1| Aldh1l1 protein [Mus musculus]
gi|21315041|gb|AAH30727.1| Aldehyde dehydrogenase 1 family, member L1 [Mus musculus]
Length = 902
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 71/316 (22%), Positives = 122/316 (38%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCQLRKEGHEVVGVFTIPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ ++ + A++ V+ IP ++NA + G H SLLPR
Sbjct: 54 FKFPRWRARGQALPEVVAKYQALGAELNVLPFCSQFIPMEVINAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFTIFWADDGLDTGDLLLQKECDVLPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K +N+ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGTAPRRPQPEEGATYEGIQKKETAMINWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L E+ + G +PG V + + + + +Q
Sbjct: 234 WTEACGQKLTFFNSTLNTSGLVAQGEALPIPGAHRPGLVTKAGLILFGNDDRMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ F G
Sbjct: 294 LEDGKMMPASQFFKGS 309
>gi|57505336|ref|ZP_00371265.1| methionyl-tRNA formyltransferase [Campylobacter upsaliensis RM3195]
gi|57016472|gb|EAL53257.1| methionyl-tRNA formyltransferase [Campylobacter upsaliensis RM3195]
Length = 302
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 83/311 (26%), Positives = 136/311 (43%), Gaps = 12/311 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF-- 58
M ++VFMGT +A LQ L+ +++++TQP + G R S Q+
Sbjct: 1 MK-KLVFMGTPAYATHILQELL-RHFELLALFTQPDKAVG-RKQILTPSDTKAFLQKTAP 57
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P P L EE + L +VVA I + + N HASLLP++RG
Sbjct: 58 QIPIFTPKSLKDEELFESLRALKPDFIVVAAYGKILPQNILDLA-PCINLHASLLPKYRG 116
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A+PIQ AI+ GD +G+ M MD LDTG + + I + ++ + A+
Sbjct: 117 ASPIQSAILNGDEVSGVCSMLMDAGLDTGAILQSVECDIKDKKAEEVFEIFGNLAASLAV 176
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + Q E+ ++ K K E + A+ ++ A P+PG +
Sbjct: 177 ETL---RHFSQITPQKQDESKVSI-CKKIKKEDGLVDLSHAKKLYRKFLAFYPWPGVF-- 230
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ G K I+L + + E E + +F + C +G +RI LQ +G + LD FL
Sbjct: 231 LENGLKFLDIELYDEKENEKERLILALEKESFLLTCKKGTLRIKVLQESGKKPLDGRTFL 290
Query: 299 LGCPVIIGCIV 309
G + +
Sbjct: 291 NGKRLKSADYL 301
>gi|292487571|ref|YP_003530443.1| bifunctional polymyxin resistance protein arnA [Erwinia amylovora
CFBP1430]
gi|292898811|ref|YP_003538180.1| bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy
l-arabinose formyltransferase [Erwinia amylovora ATCC
49946]
gi|291198659|emb|CBJ45767.1| bifunctional polymyxin resistance protein [includes: UDP-glucuronic
acid decarboxylase; UDP-4-amino-4-deoxy l-arabinose
formyltransferase] [Erwinia amylovora ATCC 49946]
gi|291552990|emb|CBA20035.1| Bifunctional polymyxin resistance protein arnA [Erwinia amylovora
CFBP1430]
Length = 660
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 62/286 (21%), Positives = 126/286 (44%), Gaps = 9/286 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + L+AL + + I +++T A ++V + A + +P
Sbjct: 1 MKAVVFAYHDIGCTGLRALAQAGYQIAAIFTHTDDAAENH----FFASVARTAAQLGVPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ S DV Y ++ I+++ G +N HASLLP++RG AP
Sbjct: 57 YAPEDVNHPLWIDRIRSMAPDVIFSFHYRHMLNDAIISSASRGAFNLHASLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ + G+ ETG+ + M K D G + KVPI+ + + L ++ +
Sbjct: 117 LNWVLANGERETGVTLHHMVKRADAGAIIAQSKVPIADHDDALTLHHKMCAAAGELLANT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + + PQ E+ +Y + + + R+++ A+ +HN +R P+PGA+ +
Sbjct: 177 LPDIRTGSDVAHPQDESQASYVGRRTPEDGRIDWQLPAQRIHNLVRAVTDPWPGAFSFVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQ 285
G + + +PG +++ +AC++GA+ I+ Q
Sbjct: 237 SGKFIVWQS--KVRHDYPANRPGTILSVAPLVVACAEGALEIVTGQ 280
>gi|182440502|ref|YP_001828221.1| putative formyltransferase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178469018|dbj|BAG23538.1| putative formyltransferase [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 315
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 80/310 (25%), Positives = 135/310 (43%), Gaps = 20/310 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TLQAL+ S H++V V T P + K +V A+E +P
Sbjct: 1 MRVVMFGYQTWGHRTLQALLDSEHTVVLVVTHP--RSEHAYEKIWSDSVADLAEEHGVPV 58
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L + EE + L D+ V + IP RI + G N H SLLP++ G +P
Sbjct: 59 LTRERPDDEELFERLKEADADIIVANNWRTWIPPRIFGLPRHGTLNVHDSLLPKYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G++E G+ MD+ LD G + + + L L A + A
Sbjct: 119 LIWALINGESEVGVTAHLMDEELDAGDIVRQEAIAVGPTDTATDLFHRTVDLIAPVTIGA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS-PFPGAWLEMM 240
+D + +PQ + T+ K + + R+++ AE++ IRA S P+P A+
Sbjct: 179 LDLIASGQTEFTPQDRSRATFFHKRAAEDIRIDWNWPAEDLERLIRAQSAPYPSAFTF-- 236
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAG 288
++ R+++L + + + G PG V I A + I R++
Sbjct: 237 --HRGRRLEVLSAVVSQNRYGGTPGRVFYREGEGVVIVAGADARTGRNHGLAITRVRTED 294
Query: 289 GRVLDIGDFL 298
GR L ++
Sbjct: 295 GRELPATEYF 304
>gi|149036737|gb|EDL91355.1| formyltetrahydrofolate dehydrogenase [Rattus norvegicus]
Length = 771
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 71/316 (22%), Positives = 123/316 (38%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCQLRKEGHEVVGVFTIPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ ++ + A++ V+ IP ++NA + G H SLLPR
Sbjct: 54 FKFPRWRARGQALPEVVAKYQALGAELNVLPFCSQFIPMEVINAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFTIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGTAPRCPQSEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L E+ + G +PG V + + + + +Q
Sbjct: 234 WTEACGQKLTFFNSTLNTSGLSTQGEALPIPGAHRPGVVTKAGLILFGNDDRMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ F G
Sbjct: 294 LEDGKMMPASQFFKGS 309
>gi|57921067|gb|AAH89101.1| Aldehyde dehydrogenase 1 family, member L1 [Rattus norvegicus]
Length = 902
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 71/316 (22%), Positives = 123/316 (38%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCQLRKEGHEVVGVFTIPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ ++ + A++ V+ IP ++NA + G H SLLPR
Sbjct: 54 FKFPRWRARGQALPEVVAKYQALGAELNVLPFCSQFIPMEVINAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFTIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGTAPRCPQSEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L E+ + G +PG V + + + + +Q
Sbjct: 234 WTEACGQKLTFFNSTLNTSGLSTQGEALPIPGAHRPGVVTKAGLILFGNDDRMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ F G
Sbjct: 294 LEDGKMMPASQFFKGS 309
>gi|312171676|emb|CBX79934.1| Bifunctional polymyxin resistance protein arnA [Erwinia amylovora
ATCC BAA-2158]
Length = 660
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 62/286 (21%), Positives = 127/286 (44%), Gaps = 9/286 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + L+AL + + I +++T A ++V + A + +P
Sbjct: 1 MKAVVFAYHDIGCTGLRALAQAGYQIAAIFTHTDDAAENH----FFASVARTAAQLGVPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ S DV Y ++ I+++ G +N HASLLP++RG AP
Sbjct: 57 YAPEDVNHPLWIDRIRSMAPDVIFSFHYRHMLNDAIISSASRGAFNLHASLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ + G+ ETG+ + M K D G + KVPI+ + + L ++ + +
Sbjct: 117 LNWVLANGERETGVTLHHMVKRADAGAIIAQSKVPIADHDDALTLHHKMCAAAGELLAKT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + + PQ E+ +Y + + + R+++ A+ +HN +R P+PGA+ +
Sbjct: 177 LPDIRTGSDVAHPQDESQASYVGRRTPEDGRIDWQLPAQRIHNLVRAVTDPWPGAFSFVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQ 285
G + + +PG +++ +AC++GA+ I+ Q
Sbjct: 237 SGKFIVWQS--KVRHDYPANRPGTILSVAPLVVACAEGALEIVTGQ 280
>gi|225619354|ref|YP_002720580.1| methionyl-tRNA formyltransferase [Brachyspira hyodysenteriae WA1]
gi|225214173|gb|ACN82907.1| methionyl-tRNA formyltransferase [Brachyspira hyodysenteriae WA1]
Length = 293
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 67/289 (23%), Positives = 130/289 (44%), Gaps = 5/289 (1%)
Query: 25 SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSF-NADV 83
+ ++ V R+G + S V + A + L P + ++++ LS + D
Sbjct: 5 NVNLNGVIAPIDTKKDRKG-NIINSPVVEIALDKKLNLFQPESINKDDFYNILSDLSPDF 63
Query: 84 AVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKH 143
+VVAYG ++ +R L+ K+ N H SLLP RGA+P++ A++ G ++G + KMD
Sbjct: 64 LIVVAYGKILNKRTLSLPKIMPLNIHGSLLPVLRGASPVEHALLYGFEKSGTTLQKMDIK 123
Query: 144 LDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYA 203
LD G + +V I + L ++ + + E +++ + Q ++ TY
Sbjct: 124 LDEGDIILQHEVNIDKDWQFNDLYDKIKESGVYLLKEFFKDTDKHISNMIKQDDSLATYC 183
Query: 204 EKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPG 263
KI K + +++F + A ++HN RA +P A+ + + + G
Sbjct: 184 SKIKKEDGKLDFSKDAVSLHNMTRAFVRWPTAYCFYKNVSIKVFNSECVCKSDNKDSDFG 243
Query: 264 EVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
++++ I G I LQ+ G + + +FL G +++G
Sbjct: 244 KIVDVNNNGIYINALNGLYVIKELQKEGKKRQTVKEFLCGNKLVVGEYF 292
>gi|23009515|ref|ZP_00050534.1| COG0223: Methionyl-tRNA formyltransferase [Magnetospirillum
magnetotacticum MS-1]
Length = 174
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 81/160 (50%), Positives = 108/160 (67%), Gaps = 2/160 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VFMGT +FAV TL L + H++ +VYT+ P AG RG+ S VH +A+ LP
Sbjct: 1 MRIVFMGTPDFAVPTLARLHADGHTLAAVYTRAPAKAG-RGMALRPSPVHVRAEALGLPV 59
Query: 63 LVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P+ L E + + ADVAVVVAYGL++PQ IL+ + G N H SLLPRWRGAAP
Sbjct: 60 LTPSTLKTPEAAETFAGHGADVAVVVAYGLLLPQAILDLPRFGCLNLHGSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNI 161
IQRA+MAGD E+G+ +M+M+ LDTGPVA ++PI +
Sbjct: 120 IQRAVMAGDAESGVGVMRMEAGLDTGPVALEERLPIREGM 159
>gi|189459176|gb|ACD99573.1| RE12655p [Drosophila melanogaster]
Length = 362
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 85/307 (27%), Positives = 145/307 (47%), Gaps = 27/307 (8%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+++F GT F++ +LQAL + + V T KS + V A++ LP
Sbjct: 52 KILFFGTDNFSLPSLQALHKNCGDRLGVVTS---------FKSPANCVRTYAEKEKLPL- 101
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+ + + D+ VVV++G +IP I+N G N HASLLP+WRGAAPI
Sbjct: 102 -----QKWPIDPSVCPQFDLGVVVSFGHLIPGSIINGFPYGMINVHASLLPKWRGAAPII 156
Query: 124 RAIMAGDNETGIAIMKMDKH-LDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AIM GD TG++IMK++ H D G + R+V I+ ++ L L+ L A +V+ +
Sbjct: 157 YAIMKGDASTGVSIMKIEPHRFDIGDILAQREVAINPDVFMPDLHASLASLGAELLVDTI 216
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ L PQ + ++YA KI+ T + + I + +
Sbjct: 217 NNLSVRLKEAKPQDSSRVSYAPKITSKITEIIWSE---LSAIEIYTRHRALYGYKNLTTN 273
Query: 243 NKHERIKLLESQLVEGE---GKPGEVI----NPNFTIACSQGA-VRIMRLQRAGGRVLDI 294
++++LLE +L E +PG + + + I C+Q + + +++L+ G + +
Sbjct: 274 FLGKQVQLLELRLPEKRVPVQEPGAISYLRKSRSLIIGCAQRSQLEVLQLRVEGRKPMSA 333
Query: 295 GDFLLGC 301
DF G
Sbjct: 334 QDFNNGF 340
>gi|149191240|ref|ZP_01869496.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Vibrio shilonii AK1]
gi|148834910|gb|EDL51891.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Vibrio shilonii AK1]
Length = 660
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 62/313 (19%), Positives = 128/313 (40%), Gaps = 13/313 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++VV +++L+ + I +V+T +V K A + +P
Sbjct: 1 MKVVVFAYHNIGCTGIRSLLDAGVEIEAVFTHVDD----SNENVFFDSVAKLAAKNGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ + D Y +I Q +L+ T G +N H SLLP +RG AP
Sbjct: 57 YAPEDVNHPLWVEKIRAMKPDALFSFYYRNMISQEVLDITPKGGFNLHGSLLPTYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G+ ETG+ + +M + D G + K+ I+ L + ++ + + +
Sbjct: 117 INWALVNGETETGVTLHQMVQKADAGDIVGQEKIAITDADTAETLHKRMNTASSDLLSKV 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNF-CRSAENVHNHIRALSPFPGAWLEMM 240
+ + + + Q E+ TY + + + + + S + PFPGA+ +
Sbjct: 177 LPTIVDGSFKTTAQDESKATYFGRRTPADGEIKWSNDSRTVFNLVRAVTEPFPGAFTFLG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ + ++ + + PG +++ + TIAC+QG++ + + G L
Sbjct: 237 ER----KLTIWSAEASDKTFDVTPGTIVSTSPLTIACAQGSLIVKSGEAENGLYLGGEQL 292
Query: 298 LLGCPVIIGCIVG 310
++ G G
Sbjct: 293 AAELHLVEGMRFG 305
>gi|21219037|ref|NP_624816.1| formyltransferase [Streptomyces coelicolor A3(2)]
gi|5763950|emb|CAB53329.1| putative formyltransferase [Streptomyces coelicolor A3(2)]
Length = 315
Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 76/310 (24%), Positives = 134/310 (43%), Gaps = 20/310 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TL+AL+ S H +V V T P + K +V A+E +P
Sbjct: 1 MRVVMFGYQTWGHRTLRALLDSEHDVVLVVTHP--RSEHAYEKIWSDSVADLAEEHGVPV 58
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L+ + +E + L + D+ V + IP RI + G N H SLLP++ G +P
Sbjct: 59 LIRNRPDDDELFERLKDADPDIIVANNWRTWIPPRIFGLPRHGTLNVHDSLLPKYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ E G+ M+ LD G + VP+ L + L A V A
Sbjct: 119 LIWALINGETEVGVTAHMMNDELDAGDIVRQEAVPVGPADTATDLFHKTVDLIAPVTVGA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMM 240
+ + + Q + ++ K S + R+++ AE++ +RA P+P A+
Sbjct: 179 LGLIASGQTEFTKQDRSRASFFHKRSAEDIRIDWNWPAEDLERLVRAQSEPYPSAFTF-- 236
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAG 288
++ R+++L + + E G PG + + I A + I R++
Sbjct: 237 --HRGRRLEILAAVVSEARYGGTPGRIFYREGEDVVIVAGADARRGRNHGLAITRVRTED 294
Query: 289 GRVLDIGDFL 298
GR L ++
Sbjct: 295 GRELAATEYF 304
>gi|258598045|gb|ACV83328.1| UDP-glucuronic acid decarboxylase [Proteus mirabilis]
Length = 660
Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 13/292 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + L+AL + I +V+T P S+V + + L
Sbjct: 1 MKAILFAYHDIGCVGLKALEKAGFDIQAVFTHTDDPNENH----FFSSVARVIAKMGLTV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ V Y ++ ILN G +N H SLLP++RG AP
Sbjct: 57 FAPENVNHPLWIERIHEMKPQVIFSFYYRHMLSDEILNLAPNGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ +T + + KM + D G + KV I ++ L +++ A M
Sbjct: 117 INWAIVNGETDTRVTLPKMTANADAGDIFAQEKVTIEHTDTSSILHEKVRETAAKLMAHT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + N P E+ TY + + +++ A+ VHN +R P+PGA+ +
Sbjct: 177 LPHIASGNYSTPPHDESQATYYGRRCADDGLIDWNADAKTVHNLVRAVTEPYPGAFTFLG 236
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQRAGG 289
++ + ++ V + +GK PG VI+ IAC++GA+ ++ Q G
Sbjct: 237 ER----KMIIWRARPVADNQGKRPGTVISTEPLVIACAKGAIEVITGQSENG 284
>gi|317054333|ref|YP_004118358.1| NAD-dependent epimerase/dehydratase [Pantoea sp. At-9b]
gi|316952328|gb|ADU71802.1| NAD-dependent epimerase/dehydratase [Pantoea sp. At-9b]
Length = 659
Score = 103 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 67/305 (21%), Positives = 131/305 (42%), Gaps = 15/305 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + A + AL+ + I +++T P G +V + A E +P
Sbjct: 1 MKTIVFAYHDMGCAGINALLQAGFEISAIFTHPDTA----GENHFFGSVARIAAEQGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ + + ++ Y ++ ILN+ +LG YN H SLLP++RG AP
Sbjct: 57 YAPDDVNHPLWVDRIKAMSPEIIFSFYYRNLLNDAILNSARLGAYNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ N L ++L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGDIVAQTRVAIAEQDNVLTLHRKLVQSATQLLEDT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ +++ + PQ E T + + + R+++ R A ++N +R P+PGA+
Sbjct: 177 LPAMKRGEINAVPQDEKEATVVGRRTPEDGRIDWSRPATEINNLVRAVTDPWPGAFAYAG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVIN-PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
KPG V++ F IAC +GA+ ++ Q G ++
Sbjct: 237 TVKFVVWK--GRVHPAAHGAKPGTVLSVEPFLIACGEGALEVVTGQSDNG------VYMN 288
Query: 300 GCPVI 304
G +
Sbjct: 289 GSQLA 293
>gi|302533073|ref|ZP_07285415.1| methionyl-tRNA formyltransferase [Streptomyces sp. C]
gi|302441968|gb|EFL13784.1| methionyl-tRNA formyltransferase [Streptomyces sp. C]
Length = 316
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 73/310 (23%), Positives = 133/310 (42%), Gaps = 20/310 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TLQAL+ S H +V V T P + K +V A+E +P
Sbjct: 1 MRVVMFGYQTWGHRTLQALLDSEHDVVLVVTHP--RSEHVYEKIWSDSVADLAEEHGVPV 58
Query: 63 -LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L +E +E+ + + DV V + IP R+ + G N H SLLP++ G +P
Sbjct: 59 LLRNRPDDEELFERLKAADPDVIVANNWRTWIPPRVFGLPRHGTLNVHDSLLPKYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G++E G+ M+ LD G + VP+ L + L A + A
Sbjct: 119 LIWALINGESEVGVTAHMMNDELDAGDIVRQEAVPVGPEDTATDLFHKTVDLIAPVTIGA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMM 240
+ + + Q + ++ K S + R+++ A+ + +RA P+P A+
Sbjct: 179 LGLIASGQREFTRQDRSQASFFHKRSVEDGRIDWTWPAQTLERLVRAQSDPYPSAFTF-- 236
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAG 288
++ R+++L +++ G PG + I A + + R++
Sbjct: 237 --HRGRRLEVLAARVSRARYGGTPGRIFYREGDGVVIVAGADAATGRNHGLAVTRVRTED 294
Query: 289 GRVLDIGDFL 298
GR L ++
Sbjct: 295 GRELPATEYF 304
>gi|210633315|ref|ZP_03297749.1| hypothetical protein COLSTE_01662 [Collinsella stercoris DSM 13279]
gi|210159177|gb|EEA90148.1| hypothetical protein COLSTE_01662 [Collinsella stercoris DSM 13279]
Length = 219
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 2/153 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVVFMGT FAV +L+ L ++ H + V T+P RG K S V + A + L
Sbjct: 1 MRVVFMGTPSFAVPSLRKL-AAVHDVALVLTRPDAVR-SRGKKLEPSPVKEAALDLGLEV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L ++ E + + +ADV V AYG ++P +L LG N HASLLPRWRGAAPI
Sbjct: 59 LEANRMTPEVLDALRAAHADVFCVAAYGCILPDEVLTMAPLGCVNVHASLLPRWRGAAPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKV 155
QR+I+ GD TG++IM++ +DTG
Sbjct: 119 QRSILEGDARTGVSIMRIGHGVDTGAYCAQASC 151
>gi|284931137|gb|ADC31075.1| methionyl-tRNA formyltransferase [Mycoplasma gallisepticum str. F]
Length = 315
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 82/308 (26%), Positives = 144/308 (46%), Gaps = 15/308 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+V+F GT+E ++A L+ L++ + ++V++ P R K+ L+AV + + L
Sbjct: 3 KKKVIFFGTTELSLACLKELLADNFFNVVAIICPPDR-VNLNNKKNKLNAVKQYCFDHRL 61
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ E Y+Q D+ V +AYG IP+++++ G N H S LP RG A
Sbjct: 62 TIY-QPEKLSEFYDQLAQMEFDLGVCIAYGQFIPKKVIDLFSDGILNVHPSKLPLLRGGA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G T I+IMK+D+ +D GPV ++ I+ N L QE+ V +++
Sbjct: 121 PIHHAIINGFESTAISIMKLDEKMDHGPVYDQLEIKINPEWNHDDLNQEIIVKSPAFLIK 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + NL Q T I K + +N A++ N + L PG +L+
Sbjct: 181 TIKNIYETNLQPKEQNHERFTLGLNIKKEQEHLNLNLDAKSFVNWQKGLWSTPGGYLDY- 239
Query: 241 IGNKHERIKLLESQLVEGE--------GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVL 292
++R+K+ LVE G ++ + + QG++ I + +V+
Sbjct: 240 ---DNQRVKIAACHLVENNREHNDDLVGTIYQIDSSGIYVYLKQGSIAITKYLMPSKKVV 296
Query: 293 DIGDFLLG 300
DI + G
Sbjct: 297 DIKQAING 304
>gi|290475536|ref|YP_003468424.1| putative formyltransferase [Xenorhabdus bovienii SS-2004]
gi|289174857|emb|CBJ81658.1| putative formyltransferase [Xenorhabdus bovienii SS-2004]
Length = 661
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 67/288 (23%), Positives = 128/288 (44%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + L ALV + I +V+T P S+V + + LP
Sbjct: 1 MKAVIFAYHDIGCVGLNALVKAGFDIQAVFTHTDDPNENH----FFSSVARIGADLGLPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ DV Y ++ Q +L+ + G +N H SLLP++RG AP
Sbjct: 57 FAPENVNHPLWIERIREMKPDVIFSFYYRNMLSQDLLSLAEKGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG+ + +M D G + + V I + + ++ +
Sbjct: 117 VNWAVLNGETETGVTLHRMVMKPDAGDIVAQQAVLIGETDTSLDVHGKIREAAVELLDSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ +++ ++ PQ EN TY + + + +++ +SA+ ++N +R P+PGA+ +
Sbjct: 177 LPQIKSSHYLSIPQDENQATYFGRRTAEDGEIDWHKSAKEINNLVRAVTEPYPGAFTFLG 236
Query: 241 IGNKHERIKLLESQLV--EGEGKPGEVINPN-FTIACSQGAVRIMRLQ 285
+I + S+ + + PG V++ F IAC +GA+ I Q
Sbjct: 237 ER----KITVWRSRPLIQVHDKLPGTVLSTTPFVIACGEGALEITSGQ 280
>gi|262200645|ref|YP_003271853.1| formyl transferase domain-containing protein [Gordonia bronchialis
DSM 43247]
gi|262083992|gb|ACY19960.1| formyl transferase domain protein [Gordonia bronchialis DSM 43247]
Length = 312
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 84/309 (27%), Positives = 141/309 (45%), Gaps = 18/309 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+V G + TLQAL+ S H +V T P +G +V + A+E ++P
Sbjct: 1 MRIVSFGYQTWGRRTLQALLDSPHEVVLAVTHPASDDPYKG--IWSDSVEELARENNIPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + E E DV VV ++ +P+ + + + G N H SLLP++ G +P+
Sbjct: 59 HLTERADPETIELVQRAAPDVIVVNSWYTWMPKELYDFPRHGTLNLHDSLLPKFTGFSPV 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A+++G +E G+ + +MD+ LDTG + +PI I L L A+ EA+
Sbjct: 119 LWALISGADEIGLTVHRMDEQLDTGDILVQHSLPIEPGITGTELVLAGMELIPGAVNEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFC-RSAENVHNHIRALSPFPGAWLEMMI 241
LE N PQ ++ TY K S+ + +++ +A+ +P+P A+
Sbjct: 179 AALESGNPQWRPQDKSARTYFHKRSERDGLIDWRSDAADIERLIRALSAPYPPAFTHY-- 236
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI--NPNFTIACSQGAVR-------IMRLQRAGGR 290
+ ERI++L S++ E G G VI T+ C A+R I R++ G
Sbjct: 237 --RGERIEVLASRVSEARYGGTAGRVIVQEDGGTVVCGPDALRGNNFGLVITRVRTPDGV 294
Query: 291 VLDIGDFLL 299
D F
Sbjct: 295 EHDGAAFFR 303
>gi|294660254|ref|NP_852911.2| methionyl-tRNA formyltransferase [Mycoplasma gallisepticum str.
R(low)]
gi|284811910|gb|AAP56479.2| methionyl-tRNA formyltransferase [Mycoplasma gallisepticum str.
R(low)]
gi|284930372|gb|ADC30311.1| methionyl-tRNA formyltransferase [Mycoplasma gallisepticum str.
R(high)]
Length = 315
Score = 103 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 80/308 (25%), Positives = 141/308 (45%), Gaps = 15/308 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+V+F GT+E ++A L+ L+ + ++V++ P R K+ L+AV + + L
Sbjct: 3 KKKVIFFGTTELSLACLKELLVDNFFNVVAIICPPDR-VNLNNKKNKLNAVKQYCLDNKL 61
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ E Y+Q D+ V +AYG IP+++++ G N H S LP RG A
Sbjct: 62 TIY-QPEKLSEFYDQLAQMEFDLGVCIAYGQFIPKKVIDLFSDGILNVHPSKLPLLRGGA 120
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G T I+IMK+D+ +D GPV ++ I+ N L QE+ +++
Sbjct: 121 PIHHAIINGFESTAISIMKLDEKMDHGPVYDQLEIKINPEWNHDDLNQEIIAKSPAFLIK 180
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + NL Q T I K + + A++ N + L PG +L+
Sbjct: 181 TIKNIYETNLQPKEQNHERFTLGLNIKKEQEHLILNLDAKSFVNWQKGLWSTPGGYLDY- 239
Query: 241 IGNKHERIKLLESQLVEGE--------GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVL 292
++R+K+ LVE G ++ + + QG++ I + +V+
Sbjct: 240 ---DNQRVKIAACHLVENNREHNDDLVGTIYQIDSSGIYVYLKQGSIAITKYLMPSKKVV 296
Query: 293 DIGDFLLG 300
DI + G
Sbjct: 297 DIKQAING 304
>gi|111021684|ref|YP_704656.1| methionyl-tRNA formyltransferase [Rhodococcus jostii RHA1]
gi|110821214|gb|ABG96498.1| methionyl-tRNA formyltransferase [Rhodococcus jostii RHA1]
Length = 311
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 68/309 (22%), Positives = 132/309 (42%), Gaps = 19/309 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV +G + TLQAL+ S H +V T P + + +V A E +P
Sbjct: 1 MRVATLGYQTWGHRTLQALLQSDHEVVLAITHP--KSDHVYEQMWADSVADLATEHGVPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ TK + + D+ V + +P+ + ++ + G N H SLLP++ G +P+
Sbjct: 59 HIATKPDENFKAALKQADPDIVVANNWRTWLPRDVFDSPRYGTLNIHDSLLPKYTGFSPL 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ E G+ MD+ LD G + R P+ L + ++A+
Sbjct: 119 IWALINGEEEVGLTAHLMDEELDAGDIVLQRSTPVGPTDTVTDLFHRTVDMIGPITLDAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMMI 241
+ + + +PQ + T+ K + ++ +++ A+ + +RA P+P A+
Sbjct: 179 ELIASGRMDWTPQDRSQATFFHKRAPEDSLIDWTWPADAIERLVRAQSDPYPNAFTHYKG 238
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACS-------QGAVRIMRLQRAGG 289
+R+++L++ + EG G PG V I ++I R++ G
Sbjct: 239 ----QRVRVLKAAVSEGNYGGTPGRVFIHEGDGMVIVAGPDARTGRNKGLKIQRVRLDDG 294
Query: 290 RVLDIGDFL 298
L +F
Sbjct: 295 TELAGTEFF 303
>gi|328953374|ref|YP_004370708.1| Formyltetrahydrofolate dehydrogenase [Desulfobacca acetoxidans DSM
11109]
gi|328453698|gb|AEB09527.1| Formyltetrahydrofolate dehydrogenase [Desulfobacca acetoxidans DSM
11109]
Length = 305
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 79/315 (25%), Positives = 136/315 (43%), Gaps = 18/315 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ +G + F + L + + IV V+ P P G+ + + A +P
Sbjct: 1 MRIALLGQAAFGADVFKVL-NPRYGIVGVFCPPDSPKGK------PDPLKEAAVAAGVPV 53
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P ++ E YEQ D+AV+ ++P R+L +LG H S+LPR RGA+
Sbjct: 54 FQPRRMKDPEAYEQMKKLAPDLAVLAFVTDIVPGRVLALPRLGSICYHPSILPRHRGASA 113
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCAHAMVE 180
I A++ GD++TG+ I +D+ +DTG + ++V + + T + L A+ E
Sbjct: 114 INWAVIHGDSQTGLTIFWVDEGIDTGDILLQKEVDLGPDETTGAVYFNKLYPLGVEALAE 173
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+D + P PQ + TY + +N+ + V+N IR P PGA
Sbjct: 174 AVDLIAAGKAPRIPQDHSLATYEPPCDERVAGLNWDQPGRAVYNFIRGCDPQPGATTTF- 232
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRA--GGRVLDIG 295
+ + + + PGE++ +A GAV I RL+ G +
Sbjct: 233 -RGETVKFFNASYAPQDHDALPGEILEVTPKGLKVAVKGGAVIIARLRAKDLGK--VKAE 289
Query: 296 DFLLGCPVIIGCIVG 310
+F+ +G G
Sbjct: 290 EFIQSQDPRVGERFG 304
>gi|197251120|ref|YP_002147255.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|226723720|sp|B5EZH8|ARNA_SALA4 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|197214823|gb|ACH52220.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
Length = 660
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 67/312 (21%), Positives = 139/312 (44%), Gaps = 13/312 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A E +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAELGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGDIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q G +
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEIITGQAGDGIAVQGSQL 292
Query: 298 LLGCPVIIGCIV 309
++ G +
Sbjct: 293 AQTLGLVAGARL 304
>gi|226364220|ref|YP_002782002.1| formyltransferase [Rhodococcus opacus B4]
gi|226242709|dbj|BAH53057.1| putative formyltransferase [Rhodococcus opacus B4]
Length = 311
Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 70/309 (22%), Positives = 131/309 (42%), Gaps = 19/309 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV +G + TLQAL+ S H +V T P + + +V A E +P
Sbjct: 1 MRVATLGYQTWGHRTLQALLQSDHEVVLAITHP--KSDHVYEQMWADSVADLATEHGVPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ TK ++ + D+ V + +P+ + ++ + G N H SLLP++ G +P+
Sbjct: 59 HIATKPDEDFKAALKEADPDIVVANNWRTWLPRDVFDSPRYGTLNIHDSLLPKYTGFSPL 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ E G+ MD+ LD G + R + L + ++A+
Sbjct: 119 IWALINGEEEVGLTAHLMDEELDAGDIVLQRSTRVGPTDTVTDLFHRTVDMIGPITLDAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMMI 241
+E +PQ + T+ K + ++ +++ A+ + +RA P+P A+
Sbjct: 179 ALIESGRTDWTPQDRSQATFFHKRAPEDSLIDWTWPADAIERLVRAQSDPYPNAYTHFKG 238
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACS-------QGAVRIMRLQRAGG 289
+RI++L++ + EG G PG V I ++I R++ G
Sbjct: 239 ----QRIRVLKAAVSEGNYGGTPGRVFIHEGDGMVIVAGPDARTGQNKGLKIQRVRLDDG 294
Query: 290 RVLDIGDFL 298
L DF
Sbjct: 295 TELAGTDFF 303
>gi|157370396|ref|YP_001478385.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Serratia proteamaculans 568]
gi|166988218|sp|A8GDR7|ARNA_SERP5 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|157322160|gb|ABV41257.1| NAD-dependent epimerase/dehydratase [Serratia proteamaculans 568]
Length = 660
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 68/288 (23%), Positives = 134/288 (46%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + A L+AL + + I +V+T P G + S+V + E LP
Sbjct: 1 MKAIVFAYHDIGCAGLKALTDAGYDIQAVFTHTDDP----GENNFFSSVARVGAELELPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ D+ Y ++ + +L+ G +N H SLLP +RG AP
Sbjct: 57 YAPEDVNHPLWIERIREMQPDIIFSFYYRNMLSEELLSLAPKGGFNLHGSLLPHYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG + KM K D G + KV I++N L +++ + E
Sbjct: 117 VNWALVNGETETGATLHKMVKRPDAGDIVGQHKVAIAANDTALTLHKKVLEAAQALLKEQ 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ KL+ + Q E +Y + + + + + +SA+ ++N +R P+PGA+ +
Sbjct: 177 LPKLKNGTASFTRQNEAEASYFGRRTAADGEILWHKSAQEINNLVRAVTEPYPGAFSYLG 236
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRIMRLQ 285
++ + +++++ + +PG V++ + IAC +GA+ I+ Q
Sbjct: 237 ----QRKLIVWRARVLDTRHDKQPGTVLSTSPLIIACGEGALEIVAGQ 280
>gi|253689295|ref|YP_003018485.1| NAD-dependent epimerase/dehydratase [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|259563492|sp|C6DAW5|ARNA_PECCP RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|251755873|gb|ACT13949.1| NAD-dependent epimerase/dehydratase [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 672
Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 67/300 (22%), Positives = 128/300 (42%), Gaps = 11/300 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + L+AL + + I +V+T P G ++V K A E +P
Sbjct: 1 MKAIVFAYHDIGCVGLEALKLAGYEIQAVFTHSDAP----GENHFYASVAKAAAEMDVPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ DV Y ++ IL G +N H SLLPR+RG AP
Sbjct: 57 FAPEDVNHPLWVNRIRELAPDVIFSFYYRTLLSDDILQLPSFGAFNLHGSLLPRYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ +TG+ + KM D G + V I L + A + +
Sbjct: 117 VNWVLVNGETQTGVTLHKMVSRADAGDIVAQSVVEIDDEDTALTLHGKCRTTAAALLAQQ 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + + L+PQ E+ +Y + + + +++ +SA ++N IR P+PGA+ +
Sbjct: 177 LPLIRSREIMLTPQDESQASYFGRRTAADGLIDWQKSAREINNLIRAVTEPYPGAFTFLG 236
Query: 241 IGN-KHERIKLLESQLVEGEG---KPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIG 295
R ++L++ V+ G +PG +I+ + ++C + A+ I+ Q G +
Sbjct: 237 ERKVVIWRARVLKNDSVKANGVKQEPGSIISTSPLVVSCGEDALEIVSGQSESGLYMSGS 296
>gi|317472517|ref|ZP_07931838.1| formyl transferase [Anaerostipes sp. 3_2_56FAA]
gi|316900031|gb|EFV22024.1| formyl transferase [Anaerostipes sp. 3_2_56FAA]
Length = 198
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 70/156 (44%), Positives = 92/156 (58%), Gaps = 3/156 (1%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ VVFMGT EFAV TL+ L H + + TQP + G RG K V + A + +P
Sbjct: 11 AMNVVFMGTPEFAVPTLEKLTQFHH-VAAAVTQPDKQKG-RGKKLSFPPVKEAALQHGIP 68
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P K E++ + L DV VVVAYG ++P+RILN K G N H SLLP++RGA
Sbjct: 69 VLQPAKARDEQFIEDLEQLAPDVIVVVAYGQILPERILNIPKYGCINVHGSLLPKYRGAG 128
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
PIQ A++ G+ ETGI M M+K LDTG + +P
Sbjct: 129 PIQWAVLNGEKETGITTMYMEKGLDTGDMIDKAVIP 164
>gi|42543697|pdb|1S3I|A Chain A, Crystal Structure Of The N Terminal Hydrolase Domain Of
10- Formyltetrahydrofolate Dehydrogenase
Length = 310
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 71/316 (22%), Positives = 122/316 (38%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCQLRKEGHEVVGVFTIPDKDG-------KADPDGLEAEKDGVPV 53
Query: 63 LVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ ++ + A++ V+ IP ++NA + G H SLLPR
Sbjct: 54 FKFPRWRARGQALPEVVAKYQALGAELNVLPFCSQFIPMEVINAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFTIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGTAPRCPQSEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L E+ + G +PG V + + + + +Q
Sbjct: 234 WTEACGQKLTFFNSTLNTSGLSTQGEALPIPGAHRPGVVTKAGLILFGNDDRMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ F G
Sbjct: 294 LEDGKMMPASQFFKGS 309
>gi|195505406|ref|XP_002099490.1| GE23322 [Drosophila yakuba]
gi|194185591|gb|EDW99202.1| GE23322 [Drosophila yakuba]
Length = 343
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 27/307 (8%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+++F GT F++ +LQAL + + V T KS + V A++ LP
Sbjct: 37 KILFFGTDNFSLPSLQALHKNCGDRLGVVTS---------FKSPANCVRSYAEKEKLPL- 86
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+ + + D+ VVV++G +IP I++ G N HASLLP+WRGAAPI
Sbjct: 87 -----QKWPIDPSVCLKFDLGVVVSFGHLIPANIISGFPNGMINVHASLLPKWRGAAPII 141
Query: 124 RAIMAGDNETGIAIMKMDKH-LDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AIM GD TG++IMK++ H D G + RKV I N+ L L+ L A +V+ +
Sbjct: 142 YAIMKGDASTGVSIMKIEPHRFDIGAILAQRKVAIEPNVFMPDLHASLASLGADLLVDTV 201
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ L PQ +YA KI+ T V + + I + +
Sbjct: 202 NNLSVRLKEAQPQDITKASYAPKITSKITEVIWSE---LSASEIYTRHRALYGYKNLTTN 258
Query: 243 NKHERIKLLESQLVEGEG---KPGEVI----NPNFTIACSQGA-VRIMRLQRAGGRVLDI 294
++++LLE +L E E +PG V + I C+Q + + +++L+ G + +
Sbjct: 259 FLGKQVQLLELRLPEKELPMQEPGAVSYLRKARSLIIGCAQQSQLEVLQLRVEGRKPMSA 318
Query: 295 GDFLLGC 301
DF G
Sbjct: 319 QDFNNGF 325
>gi|198243911|ref|YP_002216367.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|226723721|sp|B5FNT9|ARNA_SALDC RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|197938427|gb|ACH75760.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|326624117|gb|EGE30462.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Dublin str. 3246]
Length = 660
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 66/288 (22%), Positives = 134/288 (46%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A E +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAELGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ F D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAEFAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGDIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEIITGQ 280
>gi|58384665|gb|AAW72680.1| methionyl-tRNA formyltransferase [Buchnera aphidicola (Cinara
cedri)]
Length = 318
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 82/303 (27%), Positives = 146/303 (48%), Gaps = 5/303 (1%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+++F G+ +F++A LQ+L S + I +V T+P + K S+V + + +
Sbjct: 7 KIIFAGSDKFSLAHLQSLFFSQNIISAVLTKPDN-QYFKKKKKAFSSVKNFSIKNKIKIF 65
Query: 64 VPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P ++ Y N D+ +V +YG++IP++IL LG N HASLLP+W+GAAPI
Sbjct: 66 QPKDLYEEKFYLNIKKINPDLLIVPSYGMIIPKKILQLFPLGGINVHASLLPKWKGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QR+I+ GD +TGI+++KM+ +D+G + + PI N NT L L + M +A+
Sbjct: 126 QRSILHGDKKTGISVIKMNSKMDSGKIIYQLSCPIYYNDNTKKLSIRLIPISLQCMYQAL 185
Query: 183 DKLE-QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + Q N T+A KI K E +++ ++ + IRA S +P
Sbjct: 186 NIILSKKKKKFHKQKRNQETFALKIKKEEAIISWSQTVIEIDRKIRAFSLWPICKFFFKK 245
Query: 242 GNKHERIKLLESQLVEG--EGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ + S G+ + + G + I +++ G + + I + L
Sbjct: 246 LLIQIKKSSIISIKKNNFKNGEIVNITKKGVQVNTKTGILNIEKIKIPGKKTMYIHEILN 305
Query: 300 GCP 302
Sbjct: 306 SRR 308
>gi|227329452|ref|ZP_03833476.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 666
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 66/313 (21%), Positives = 131/313 (41%), Gaps = 21/313 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + L+AL + + I +V+T P G AV K A E +P
Sbjct: 1 MKAIVFAYHDIGCVGLEALKLAGYEIQAVFTHSDAP----GENHFYGAVAKAAAEMDVPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ DV Y ++ IL G +N H SLLP +RG AP
Sbjct: 57 FAPEDINHPLWVNRIRELAPDVIFSFYYRTLLSDDILQLPSFGAFNLHGSLLPHYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ +TG+ + KM D G + V I L + A + +
Sbjct: 117 VNWVLVNGETQTGVTLHKMVSRADAGDIVAQSVVAIDEEDTALTLHGKCRTAAAALLAQQ 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + + L+ Q E+ +Y + + + +++ +SA ++N IR P+PGA+ +
Sbjct: 177 LPLIRSREITLTRQDESRASYFGRRTAADGLIDWHKSAREINNLIRAVTEPYPGAFTFLG 236
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ + +++V+ + G+PG +I+ + ++C + A+ I+ Q G +
Sbjct: 237 ER----KVTIWRARVVKDKIGGEPGAIISTSPLVVSCGEDALEIVSGQSE------AGLY 286
Query: 298 LLGCPVII--GCI 308
+ G + G +
Sbjct: 287 MSGSRLAAEMGMV 299
>gi|320093624|ref|ZP_08025509.1| methionyl-tRNA formyltransferase [Actinomyces sp. oral taxon 178
str. F0338]
gi|319979425|gb|EFW10902.1| methionyl-tRNA formyltransferase [Actinomyces sp. oral taxon 178
str. F0338]
Length = 274
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 92/279 (32%), Positives = 139/279 (49%), Gaps = 9/279 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++F GT E AV TL AL++S+H + V T+PP +G RG SAV + A+ L
Sbjct: 1 MRIIFAGTPEAAVPTLTALIASTHDVALVVTRPPARSG-RGRAMRPSAVAQCARGAGLAV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L G+E + AD+ VVVAYG ++P +L G+ N H S LPRWRGAAP
Sbjct: 60 LETASLKGEEAAGAIGAVGADLGVVVAYGGLVPPDVLAMPAHGWVNLHFSDLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+Q A+++GD T + +++ LDTGPV I + L + + A +
Sbjct: 120 VQWAVLSGDPMTASCVFALEEGLDTGPVYSREPFTIGHETSGELLDRMAAAGGAQVLAC- 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D L + Q + G T A +++ + V+F A +RA++P PGAW +
Sbjct: 179 VDSLAAGTARATAQSDRGATRARRLTAADGYVSFDEDAPATDRRVRAVTPNPGAWT---L 235
Query: 242 GNKHERIKLLESQLVEGEG-KPGEVI--NPNFTIACSQG 277
G RIKL G + G+V + + C+QG
Sbjct: 236 GPGGGRIKLGPVTAAPDRGLRAGQVEAGKRDVHVGCAQG 274
>gi|291333896|gb|ADD93576.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S04-C385]
Length = 155
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 62/153 (40%), Positives = 89/153 (58%), Gaps = 3/153 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++ F GT E A LQ+++ H +V V T +P+G RG K S V K A E +L
Sbjct: 1 MKIAFAGTPEIAATILQSIIDKKDHQVVCVITSVDKPSG-RGRKLKPSPVKKIALENNLT 59
Query: 62 ALVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ P EE+ + DV +VVAYG ++ + +L G N HASLLP++RGAA
Sbjct: 60 LMQPDSPKSEEFINEFKNYQCDVLLVVAYGHILTEELLETPHYGSVNIHASLLPKYRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMR 153
PIQRAI+ GD ++G+ MKM K LD+GP++
Sbjct: 120 PIQRAILNGDKKSGLTFMKMTKGLDSGPMSKRF 152
>gi|271964947|ref|YP_003339143.1| fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C- 4'-decarboxylase
[Streptosporangium roseum DSM 43021]
gi|270508122|gb|ACZ86400.1| fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C- 4'-decarboxylase
[Streptosporangium roseum DSM 43021]
Length = 315
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 68/292 (23%), Positives = 117/292 (40%), Gaps = 14/292 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TL+AL+ S H +V V T P + K +V + A++ +P
Sbjct: 1 MRVVMFGYQTWGHRTLRALLDSDHEVVLVVTHP--RSDHAYEKIWDDSVAELAEKHGVPV 58
Query: 63 -LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L +E D+ V + +P I + G N H SLLP + G +P
Sbjct: 59 LLRYRPDDEELLAALRDAAPDIIVANNWRTWLPPEIFDLPPHGTLNVHDSLLPAYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ E G+ +M+ LD G + R VP+ L L + EA
Sbjct: 119 LIWALINGEKEVGVTAHRMNAELDAGDIVLQRAVPVGPADTATDLFHRTVDLIEPIVREA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + Q + ++ K S ++ +++ AE++ +RA +
Sbjct: 179 LDLIASGRARWVAQDRSKASFFHKRSVEDSLIDWNWPAEDLERLVRAQ---SDPYPSAFT 235
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMRLQRAG 288
++ ERI+++ + + G PG V I A QR G
Sbjct: 236 YHRGERIRIVSAAVSRARYGGTPGRVFIREGDGVVIVTGADA---RSGQRPG 284
>gi|237747096|ref|ZP_04577576.1| methionyl-tRNA formyltransferase [Oxalobacter formigenes HOxBLS]
gi|229378447|gb|EEO28538.1| methionyl-tRNA formyltransferase [Oxalobacter formigenes HOxBLS]
Length = 310
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 80/316 (25%), Positives = 133/316 (42%), Gaps = 15/316 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV +G F A L+A S +V V+ P + S A+ E ++
Sbjct: 1 MRVVIIGQRSFGKAVLEAFQSRGDEVVGVFIAPEKR------NSRPDALKVHVLENNIRL 54
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L +E L D+AV+ +P+ K G H SLLP++RG +
Sbjct: 55 FQFENLASDEALSALKDLNADIAVMAYVVQFVPREFAQMPKFGTIQFHPSLLPKYRGPSA 114
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAG-LQQELSVLCAHAMVE 180
I AI+ G++ETG+ I + +D GPV + VPI + L L A++E
Sbjct: 115 ISWAIVCGEHETGVTIFRPTDVMDEGPVILQKTVPIHPDETAGALYYHHLFPLGVQALLE 174
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A D + N PQ + +Y + + E R+N+ + V++ IR +P PGAW
Sbjct: 175 AADLIVSGNYEEKPQDVHKGSYESWLKEPEARINWNNHVDQVYDLIRGCNPNPGAWTTFR 234
Query: 241 IGN--KHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGG-RVLDI 294
E K+ + GK G + + +F + G +R++ + R G + +
Sbjct: 235 GEKLVMMECRKIPHNSFKNVRGKAGTITSLDGDSFIVGAQGGEIRVLSV-RTGKEKNISA 293
Query: 295 GDFLLGCPVIIGCIVG 310
++ + IG G
Sbjct: 294 REYQKRVGLDIGMKFG 309
>gi|289644589|ref|ZP_06476658.1| formyl transferase domain protein [Frankia symbiont of Datisca
glomerata]
gi|289505603|gb|EFD26633.1| formyl transferase domain protein [Frankia symbiont of Datisca
glomerata]
Length = 314
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 70/309 (22%), Positives = 124/309 (40%), Gaps = 17/309 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TL+AL+ S H + T P K +V A+E +P
Sbjct: 1 MRVVTFGYQTWGHRTLRALLDSEHEVALAVTHPHSDHAY--EKIWDDSVADLAEEHGVPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L+ ++ ++ Q D+ V + IP + + G N H SLLP + G AP+
Sbjct: 59 LIRSRPDEDLVRQLEKVEPDIIVATNWRTWIPPEVFTLPRHGTLNVHDSLLPAYAGFAPL 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ + G+ MD LD G + R VP+ L + L V+ +
Sbjct: 119 IWALINGERDVGVTAHMMDDDLDAGDIVLQRAVPVEPTDTATDLFHKTLALFGPITVDGL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + Q + ++ K S ++RV++ AE++ +RA +
Sbjct: 179 ALIASGHTDWVRQDRSRASFFHKRSIEDSRVDWTWPAEDIERLVRAQ---SDPYPNAFTF 235
Query: 243 NKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAGGR 290
++ ERI++L + + +G G PG V I A + I R++ G
Sbjct: 236 HRGERIRILSAAVSQGRYGGTPGRVFIREGDGIVIVAGADARRGHNRGLVIRRIRTDDGA 295
Query: 291 VLDIGDFLL 299
++
Sbjct: 296 EYPATEYFR 304
>gi|323212322|gb|EFZ97145.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
Length = 470
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 65/288 (22%), Positives = 133/288 (46%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A E +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAELGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGDIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEIITGQ 280
>gi|205353414|ref|YP_002227215.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|226723723|sp|B5RCC4|ARNA_SALG2 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|205273195|emb|CAR38158.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|326628505|gb|EGE34848.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 660
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 65/288 (22%), Positives = 133/288 (46%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A E +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAELGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGDIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEIITGQ 280
>gi|168817972|ref|ZP_02829972.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|205344826|gb|EDZ31590.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|320086731|emb|CBY96503.1| Bifunctional polymyxin resistance protein arnA Includes:
UDP-4-amino-4-deoxy-L-arabinose formyltransferase;
UDP-L-Ara4N formyltransferase; ArnAFT; Includes:
RecName: Full=UDP-glucuronic acid oxidase,
UDP-4-keto-hexauronic acid decarboxylating; UDP-GlcUA
decarboxylase; UDP-glucuronic acid dehydrogenase; ArnADH
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
Length = 660
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 66/288 (22%), Positives = 133/288 (46%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A E +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAELGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGDIPSVPQRESDATYYSRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + IAC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRIACADGALEIITGQ 280
>gi|204929026|ref|ZP_03220169.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|207857717|ref|YP_002244368.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|238913508|ref|ZP_04657345.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|226723722|sp|B5R272|ARNA_SALEP RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|204321570|gb|EDZ06769.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|206709520|emb|CAR33865.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
Length = 660
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 65/288 (22%), Positives = 133/288 (46%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A E +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAELGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGDIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEIITGQ 280
>gi|168237317|ref|ZP_02662375.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|194736015|ref|YP_002115369.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|226723727|sp|B4TPI2|ARNA_SALSV RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|194711517|gb|ACF90738.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197289624|gb|EDY28987.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|322617046|gb|EFY13952.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322617648|gb|EFY14547.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322624722|gb|EFY21551.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322630271|gb|EFY27041.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322634452|gb|EFY31185.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322639162|gb|EFY35854.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640025|gb|EFY36692.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322645754|gb|EFY42278.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322651529|gb|EFY47904.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322656089|gb|EFY52388.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322659442|gb|EFY55689.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322665903|gb|EFY62086.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322669858|gb|EFY65999.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322673844|gb|EFY69941.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322678602|gb|EFY74658.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322683602|gb|EFY79616.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322687678|gb|EFY83648.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323193488|gb|EFZ78693.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323198393|gb|EFZ83495.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323208555|gb|EFZ93494.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323218272|gb|EGA02982.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222971|gb|EGA07320.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227406|gb|EGA11571.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323232267|gb|EGA16370.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235700|gb|EGA19784.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323241140|gb|EGA25176.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244882|gb|EGA28884.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323250001|gb|EGA33895.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251613|gb|EGA35481.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323254924|gb|EGA38715.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323263060|gb|EGA46606.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323268120|gb|EGA51597.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270787|gb|EGA54225.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 660
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 65/288 (22%), Positives = 133/288 (46%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A E +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAELGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGDIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEIITGQ 280
>gi|207727560|ref|YP_002255954.1| methionyl-trna formyltransferase protein [Ralstonia solanacearum
MolK2]
gi|206590797|emb|CAQ56409.1| methionyl-trna formyltransferase protein [Ralstonia solanacearum
MolK2]
Length = 283
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 105/283 (37%), Positives = 145/283 (51%), Gaps = 21/283 (7%)
Query: 44 LKSVLSAVHKKAQEFSL-PALVPTKLGQEEYEQFLS---------FNADVAVVVAYGLVI 93
+ S V + A L P L P L + + DV VV AYGL++
Sbjct: 1 MHLQASPVKQYAISHGLGPILQPPSLRRAGKYPQEAAEAIDALSAQRPDVMVVAAYGLIL 60
Query: 94 PQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMR 153
PQ +L+ + G N H SLLPRWRGAAPI RAI AGD ETGI +M+MD LDTG + M
Sbjct: 61 PQEVLDLPRFGCINIHGSLLPRWRGAAPIHRAIEAGDAETGITLMQMDAGLDTGDMITME 120
Query: 154 KVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETR 212
VPI T L L+ L +VEA+ +L Q+ P +PQ G+TYAEKI+K E
Sbjct: 121 HVPIGLTDTTGTLHDTLAALGGRMVVEALARLAQDGRLPATPQPAEGVTYAEKIAKEEAA 180
Query: 213 VNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVE---GEGKPGEVIN-- 267
+++ R + + + A +PFPGA E+ IK ++ + + +PG V+
Sbjct: 181 LDWSRQSAALLRQVHAFNPFPGASAEL----DGVTIKFWQATALPDRPADAEPGTVLAAD 236
Query: 268 -PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
IAC GA+R+ +LQ+ GG+ L +FL G V G
Sbjct: 237 ADGVVIACGAGALRVTQLQKPGGKRLPAREFLQGLAVRPGQRF 279
>gi|168229666|ref|ZP_02654724.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|194469993|ref|ZP_03075977.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194456357|gb|EDX45196.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|205335787|gb|EDZ22551.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
Length = 660
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 66/288 (22%), Positives = 133/288 (46%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A E +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAELGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGDIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + IAC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRIACADGALEIITGQ 280
>gi|241766758|ref|ZP_04764588.1| methionyl-tRNA formyltransferase [Acidovorax delafieldii 2AN]
gi|241362864|gb|EER58603.1| methionyl-tRNA formyltransferase [Acidovorax delafieldii 2AN]
Length = 72
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VF GT +FA LQ L+ + ++ V TQP RPAG RG+K S V + A E +
Sbjct: 1 MKIVFAGTPDFARVALQRLLEAGFTVPLVLTQPDRPAG-RGMKLQASPVKQCALEHGIAV 59
>gi|225155310|ref|ZP_03723803.1| Methionyl-tRNA formyltransferase [Opitutaceae bacterium TAV2]
gi|224803917|gb|EEG22147.1| Methionyl-tRNA formyltransferase [Opitutaceae bacterium TAV2]
Length = 348
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 86/331 (25%), Positives = 141/331 (42%), Gaps = 52/331 (15%)
Query: 30 SVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAY 89
+V+TQP R G RG K +A+ AQ S+P P KL E + + DV +V+AY
Sbjct: 2 AVFTQPDRAVG-RGQKVTPNAIKIWAQSRSIPVYQPEKLTDETRAELAALAPDVTLVMAY 60
Query: 90 GLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPV 149
G ++ + +LG N H SLLP++RGA+PIQ A+ G+ ETG+ +M++ + LD GP+
Sbjct: 61 GHILRDAFIATPRLGTLNLHTSLLPKYRGASPIQTAVACGERETGVTLMRIVRQLDAGPI 120
Query: 150 AFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKG 209
A + +VPI ++ LS C + A+ +L L Q T+ K++K
Sbjct: 121 ADVERVPIGPLDTALEVEARLSAACVPLVARALPRLAAGTLEFREQDHAAATFCRKLTKA 180
Query: 210 ETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE-------------RIKLLESQLV 256
+ ++F A + I L P+P +E+ ++ +
Sbjct: 181 DGVLDFSAPAAVLAARINGLFPWPACSVEIDGQRVKLGRADSIGTDTSTDNHRVDRATAP 240
Query: 257 EGEGK-----------------------PGEVI---------------NPNFTIACSQGA 278
+ G PG ++ +A G
Sbjct: 241 DPAGTDSGKPLPSSSSSVIIEERSGTTLPGTIVPPADTRGGDPDGSPGGEYLCVATGSGV 300
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+R+ LQR GGR+L +FL G + +G +
Sbjct: 301 LRLHALQRPGGRMLPASEFLRGFFLPLGTRL 331
>gi|302539790|ref|ZP_07292132.1| methionyl-tRNA formyltransferase [Streptomyces hygroscopicus ATCC
53653]
gi|302457408|gb|EFL20501.1| methionyl-tRNA formyltransferase [Streptomyces himastatinicus ATCC
53653]
Length = 315
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 74/309 (23%), Positives = 134/309 (43%), Gaps = 18/309 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TLQAL+ S H ++ V T P + K +V A+E +P
Sbjct: 1 MRVVMFGYQTWGHRTLQALLDSEHDVLLVVTHP--KSEHAYEKIWSDSVADLAEEHGVPV 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L+ + +E +E+ + D+ V + IP RI + + G N H SLLP++ G +P
Sbjct: 59 LIRNRPDDDELFERLKEADPDIIVANNWRTWIPPRIFDLPRRGTLNVHDSLLPKYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G++E G+ M+ LD G + VP+ L + L A + A
Sbjct: 119 LIWALINGESEVGVTAHMMNDELDAGDIVRQEAVPVGPKDTATDLFHKTVDLIAPVTIGA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + + Q + ++ K S + R+++ AE++ +RA +
Sbjct: 179 LDLIATGQTEFAQQDRSQASFFHKRSVEDIRIDWTWPAEDLERLVRAQ---SEPYPSTYA 235
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAGG 289
+K +R+++L + + EG G PG + I A + I R++ G
Sbjct: 236 FHKGKRLEILAAVVSEGRYGGTPGRIFYREGDGVVIVAGADARTGRNHGLAITRVRTEEG 295
Query: 290 RVLDIGDFL 298
L ++
Sbjct: 296 HELAATEYF 304
>gi|37526549|ref|NP_929893.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|81572496|sp|Q7N3Q7|ARNA_PHOLL RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|36785980|emb|CAE15032.1| PbgP3 protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 660
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 68/308 (22%), Positives = 131/308 (42%), Gaps = 19/308 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + + AL + I +V+T P S+V + + + +LP
Sbjct: 1 MKAIVFAYHDIGCVGINALTKAGFDIQAVFTHTDDPNENH----FFSSVARLSADLALPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ DV Y ++ + IL+ G +N H SLLP++RG AP
Sbjct: 57 FAPENVNHPLWIERIRELKPDVIFSFYYRDMLSEDILSLASTGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G+ ETG+ + KM D G + KV I+ L ++ +
Sbjct: 117 INWAILNGEVETGVTLHKMVLKPDAGDIIAQYKVAIAETDTALTLHGKIREAAEKLFDQV 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ +++ P PQ E+ TY + + + +++ +SA ++N +R P+PGA+ +
Sbjct: 177 LPQIKAGIYPAIPQDESQATYFGRRTAVDGEIDWHKSATEINNLVRAVTEPYPGAFTFLG 236
Query: 241 IGNKHERIKLLESQLVE--GEGKPGEVIN-PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+I + + + + +PG V++ IAC +G + I+ Q G +
Sbjct: 237 ER----KITIWRACPLNETHDKQPGTVLSVDPLIIACGKGTLEIINGQSESGL------Y 286
Query: 298 LLGCPVII 305
+ G + +
Sbjct: 287 VQGHRLAV 294
>gi|116515232|ref|YP_802861.1| hypothetical protein BCc_314 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|116257086|gb|ABJ90768.1| methionyl-tRNA formyltransferase [Buchnera aphidicola str. Cc
(Cinara cedri)]
Length = 318
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 82/303 (27%), Positives = 148/303 (48%), Gaps = 5/303 (1%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+++F G+ +F++A L++L S + I +V T+P + K S+V + + +
Sbjct: 7 KIIFAGSDKFSLAHLRSLFFSQNIISAVLTKPDN-QYFKKKKKAFSSVKNFSIKNKIKIF 65
Query: 64 VPTKLGQEEYE-QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P L +E++ N D+ +V +YG++IP++IL LG N HASLLP+W+GAAPI
Sbjct: 66 QPKDLYEEKFYLNIKKINPDLLIVSSYGMIIPKKILQLFPLGGINVHASLLPKWKGAAPI 125
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QR+I+ GD +TGI+++KM+ +D+G + + PI N NT L L + M +A+
Sbjct: 126 QRSILHGDKKTGISVIKMNSKMDSGKIIYQLSCPIYYNDNTKKLSIRLIPISLQCMYQAL 185
Query: 183 DKLE-QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + + Q N T+A KI K E +++ ++ + IRA S +P
Sbjct: 186 NIILSKKKKKFHKQKRNQETFALKIKKEEAIISWSQTVIEIDRKIRAFSLWPICKFFFKK 245
Query: 242 GNKHERIKLLESQLVEG--EGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
+ + S G+ + + G + I +++ G + + I + L
Sbjct: 246 LLIQIKKSSIISIKKNNFKNGEIVNITKKGVQVNTKTGILNIEKIKIPGKKTMYIHEILN 305
Query: 300 GCP 302
Sbjct: 306 SRR 308
>gi|323941049|gb|EGB37236.1| NAD dependent epimerase/dehydratase [Escherichia coli E482]
Length = 650
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 66/294 (22%), Positives = 128/294 (43%), Gaps = 9/294 (3%)
Query: 19 QALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLS 78
+AL+++ + I +++T P G K+ +V + A E +P P + + + ++
Sbjct: 7 EALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIA 62
Query: 79 F-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAI 137
+ DV Y +I IL G +N H SLLP++RG AP+ ++ G+ ETG+ +
Sbjct: 63 QLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTL 122
Query: 138 MKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIE 197
+M K D G + ++ I+ + L +L + + + ++ N+ Q E
Sbjct: 123 HRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIAQRE 182
Query: 198 NGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIGNKHERIKLLESQLV 256
N T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 183 NEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVGNQKFTVWSS--RVHPH 240
Query: 257 EGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ +PG VI+ IAC GA+ I+ Q G + ++ G +
Sbjct: 241 ASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQTLGLVQGSRL 294
>gi|294155794|ref|YP_003560178.1| methionyl-tRNA formyltransferase [Mycoplasma crocodyli MP145]
gi|291600272|gb|ADE19768.1| methionyl-tRNA formyltransferase [Mycoplasma crocodyli MP145]
Length = 285
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 75/294 (25%), Positives = 136/294 (46%), Gaps = 15/294 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++V GT +F+V + ++++ ++++ +QP RP RG + K +
Sbjct: 7 KIKIVLAGTPDFSVPIFEEVINN-FEVLAIISQPDRPK-NRGYSLEETPTKKL-AKKYKI 63
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ E Y++ + D + A+G IP +L K+ N H SLLP++RGAAP
Sbjct: 64 KIYQPNKISEIYQELSNMEFDFFLTAAFGQYIPNNVLELPKIASLNIHGSLLPKYRGAAP 123
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ +++ GD ETGI+++ M K +D G + + K+PI+ + + ++S L +
Sbjct: 124 IQYSLLNGDTETGISLIYMTKIMDAGNILKIAKLPINKEDTSTTMFSKISNLATKNITNW 183
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + NN Q E + + K+ K ++ + S E N IRA S PGA++
Sbjct: 184 LYDIYNNNFDEIIQDETKVMLSPKLLKEDSEIKNSDSVEFNFNKIRAFSENPGAYIT--- 240
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
++RIK+ + +I I CS G + Q + + I
Sbjct: 241 -KNNKRIKIFYATKS--------LIKNAPIIDCSDGFLYATDYQFESKKRITIK 285
>gi|296212761|ref|XP_002752979.1| PREDICTED: probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2
[Callithrix jacchus]
Length = 923
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 80/313 (25%), Positives = 123/313 (39%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSHLRKEGHRVVGVFTVPDKDG-------KADPLALVAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
K + + S A++ V+ IP I+++ K G H S+LPR
Sbjct: 75 VFKFPKWRVKGKTIKEVAEAYRSVGAELNVLPFCTQFIPMDIIDSPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVEPNDTVDTLYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ ++ P PQ E G TY K +++ SAE +HN IR PG
Sbjct: 195 IKAMVEAVQRIADGKAPRIPQPEEGATYEGIQKKENAEISWNWSAEVLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E ++G KPG + I + G A+ + LQ
Sbjct: 255 AWTEINGQMVTFYGSTLLNSSVPSGEPLEIKGAKKPGLITKNGLVIFGNDGKALMVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
GR++ +
Sbjct: 315 FEDGRMIPASQYF 327
>gi|149742986|ref|XP_001498666.1| PREDICTED: similar to Probable 10-formyltetrahydrofolate
dehydrogenase ALDH1L2 (Aldehyde dehydrogenase family 1
member L2) [Equus caballus]
Length = 923
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 78/315 (24%), Positives = 123/315 (39%), Gaps = 23/315 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSHLCKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + S A++ V+ IP +++ K G H S+LPR
Sbjct: 75 VFKFPRWRVKGKTIREVAEAYRSVGAELNVLPFCTQFIPMDVIDNPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVEPNDTVDALYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K +++ +SAE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPCIPQPEEGATYEGIQKKENAEISWDQSAEVLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E ++G KPG V + + G A+ + LQ
Sbjct: 255 AWTEINGQMVTFYGSSLLNGSVPPGEPLEIKGAKKPGLVTKNGLVLFGNDGKALMVRNLQ 314
Query: 286 RAGGRVLDIGDFLLG 300
G+++ + G
Sbjct: 315 LEDGKMIPASQYFSG 329
>gi|88608400|ref|YP_505995.1| methionyl-tRNA formyltransferase [Neorickettsia sennetsu str.
Miyayama]
gi|88600569|gb|ABD46037.1| methionyl-tRNA formyltransferase [Neorickettsia sennetsu str.
Miyayama]
Length = 307
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 89/306 (29%), Positives = 147/306 (48%), Gaps = 14/306 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMG+S FAV TL L++ ++ VYT+PP+P G RGL + ++ VH + E+ L
Sbjct: 1 MKILFMGSSAFAVPTLLKLIADPQFEVLEVYTKPPKPKG-RGLLTSMTQVHSTSLEYGLS 59
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P L EE DV VVV+YGL+IP ++L+ KL N H SLLPRWRG +P
Sbjct: 60 VKTPFSLKGEELP-----PCDVIVVVSYGLIIPAKLLSHPKLVPLNIHPSLLPRWRGPSP 114
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
IQ I+ GD E G++I+++ LD G + + +P+ + L L+ L A +
Sbjct: 115 IQYTILKGDKEAGVSIIRVTPELDAGAIYIQKAIPLDGTETYSILHDRLANLGASMLHGV 174
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ L N + PQ E TY++K +E + + +R L F +E+
Sbjct: 175 LETL--NTISPVPQAEEQATYSKK----LPNSVSIDFSEGIASFLRKLRVFGAVSIELFG 228
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+ +++ ++ + + + G I ++ R + DFL G
Sbjct: 229 -KHIKIVEVCKTADSPSADVGVKKDSKKILLQFKDGCATIKTVKPENKREMSTEDFLNGI 287
Query: 302 PVIIGC 307
G
Sbjct: 288 QSKYGT 293
>gi|291393315|ref|XP_002713119.1| PREDICTED: aldehyde dehydrogenase 1L1-like [Oryctolagus cuniculus]
Length = 871
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 72/316 (22%), Positives = 121/316 (38%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCHLRKDGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLGQEEYE------QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ ++ + A++ V+ IP I+NA + G H SLLPR
Sbjct: 54 FKFPRWRARGQVLPEVVAKYQALGAELNVLPFCSQFIPMEIINAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G I D LDTG + R+ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFTIFWADDGLDTGDLLLQRECEVLPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAQINWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLLESQ---------LVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L + G +PG V + + + + +Q
Sbjct: 234 WTEACGQKLTFFNSTLTVPGSVPEGDPLPIPGAHRPGLVTKAGLILFGNDDKMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ F G
Sbjct: 294 LEDGKMIPAAQFFKGA 309
>gi|194228506|ref|XP_001914883.1| PREDICTED: similar to 10-formyltetrahydrofolate dehydrogenase
(10-FTHFDH) (Aldehyde dehydrogenase family 1 member L1)
[Equus caballus]
Length = 905
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 72/316 (22%), Positives = 124/316 (39%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ + ++ + A++ V+ IP I+NA G H SLLPR
Sbjct: 54 FKFPRWRTKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIINAPCHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G +I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSSLYNRFLFPEGV 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGRAPRLPQPEEGATYEGIQKKETAKINWEQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L E+ + G +PG V + + + + +Q
Sbjct: 234 WTEACGQKLTFFNSTLNTVGLVPEGEALPIPGAHRPGLVTKDGLVLFGNDDRMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ F G
Sbjct: 294 LEDGKMILASHFFKGA 309
>gi|268592579|ref|ZP_06126800.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Providencia rettgeri DSM 1131]
gi|291311993|gb|EFE52446.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Providencia rettgeri DSM 1131]
Length = 661
Score = 99 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 68/290 (23%), Positives = 130/290 (44%), Gaps = 13/290 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + L+AL + I +V+T P S+V + + + LP
Sbjct: 1 MKAIVFAYHDIGCVGLKALEKAGFDIQAVFTHTDDPNENH----FYSSVARLSADMELPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ DV Y ++ + +L G +N H SLLP++RG AP
Sbjct: 57 FAPENVNHPLWIERIREMKPDVIFSFYYRDMLSEELLAIAPKGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G++ETG+ + KM D G + KV I+ + L ++ + +
Sbjct: 117 INWALLKGESETGVTLHKMVAKADAGDIIAQEKVVITDTDTSLTLHAKVREAAEVLLDKT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ +E + Q E+ TY + + + +N+ SA++V+ IR P+PGA+ +
Sbjct: 177 LPLIEAGSYKAVAQDESQATYFGRRTAEDGLINWNDSAKDVNCLIRAVTEPYPGAFTYLG 236
Query: 241 IGNKHERIKLLESQLVEGE-GKP-GEVINPN-FTIACSQGAVRIMRLQRA 287
++ + +++++ GKP G V++ + IAC QGA+ ++ Q
Sbjct: 237 AR----KMIIWRARVLDDNQGKPAGTVLSSDPLRIACGQGAIEVISGQSE 282
>gi|270261570|ref|ZP_06189843.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Serratia odorifera 4Rx13]
gi|270045054|gb|EFA18145.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Serratia odorifera 4Rx13]
Length = 661
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 71/288 (24%), Positives = 136/288 (47%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + A L+AL + + + +V+T P G + S+V + E LP
Sbjct: 2 MKAIVFAYHDIGCAGLKALTDAGYDVQAVFTHTDDP----GENNFFSSVARLGAELELPV 57
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ DV Y ++ IL+ LG +N H SLLPR+RG AP
Sbjct: 58 YAPEDVNHPLWIERIRQMQPDVIFSFYYRNLLSDEILSLAPLGGFNLHGSLLPRYRGRAP 117
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG + KM K D G + RKV I+++ L +++ + +
Sbjct: 118 VNWALVNGETETGATLHKMVKRPDAGDIVGQRKVAIAADDTALTLHKKVLEAAQALLKDE 177
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ KL+ + Q E +Y + + + + + +SA+ ++N IR P+PGA+ +
Sbjct: 178 LPKLKNGTASFTAQNEADASYFGRRTAADGEILWHKSAQEINNLIRAVTEPYPGAFSYLG 237
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVINPN-FTIACSQGAVRIMRLQ 285
++ + +++++ + +PG V++ + IAC +GA+ I+ Q
Sbjct: 238 ----QRKLIVWRARVLDAQHDKQPGTVLSTSPLIIACGEGALEIVAGQ 281
>gi|332252936|ref|XP_003275609.1| PREDICTED: 10-formyltetrahydrofolate dehydrogenase-like isoform 2
[Nomascus leucogenys]
Length = 912
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 71/317 (22%), Positives = 127/317 (40%), Gaps = 24/317 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 10 AMKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVP 62
Query: 62 ALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ + ++ + A++ V+ IP I+NA + G H SLLPR
Sbjct: 63 VFKFSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIINAPQHGSIIYHPSLLPR 122
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G +I D LDTG + ++ + + + L
Sbjct: 123 HRGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEG 182
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PG
Sbjct: 183 IKGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKESAKINWDQPAEAIHNWIRGNDKVPG 242
Query: 235 AWLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRL 284
AW E L ++ + G +PG V + + + + +
Sbjct: 243 AWTEAGEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNI 302
Query: 285 QRAGGRVLDIGDFLLGC 301
Q G+++ +F G
Sbjct: 303 QLENGKMILASNFFKGA 319
>gi|320006932|gb|ADW01782.1| formyl transferase domain protein [Streptomyces flavogriseus ATCC
33331]
Length = 315
Score = 99.6 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 75/310 (24%), Positives = 134/310 (43%), Gaps = 20/310 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TLQAL+ S H +V V T P + K +V A+ +P
Sbjct: 1 MRVVMFGYQTWGHRTLQALLDSEHDVVLVVTHP--RSEHAYEKIWSDSVADLAEARDVPV 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L+ + +E + + +AD+ V + IP RI + G N H SLLP++ G +P
Sbjct: 59 LIRNRPDDDELFARLQEADADIIVANNWRTWIPPRIFGLPRHGTLNIHDSLLPKYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G++E G+ M+ LD G + V + L + L + A
Sbjct: 119 LIWALINGESEVGVTAHMMNDELDAGDIVRQEAVAVGPTDTATDLFHKTVDLIGPVTIGA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMM 240
+D + + Q + T+ K + + R+++ AE++ +RA P+P A+
Sbjct: 179 LDLIAAGQTEFTRQDRSQATFFHKRAAEDIRIDWNWPAEDLERLVRAQSEPYPSAFTF-- 236
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAG 288
++ RI++L + + +G G PG V I A + + R++
Sbjct: 237 --HRGRRIEILAAVVSQGRYGGTPGRVFYREGEGVVIVAGSDARTGRNHGLAVTRVRTED 294
Query: 289 GRVLDIGDFL 298
GR L ++
Sbjct: 295 GRELPATEYF 304
>gi|332252934|ref|XP_003275608.1| PREDICTED: 10-formyltetrahydrofolate dehydrogenase-like isoform 1
[Nomascus leucogenys]
Length = 902
Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 71/316 (22%), Positives = 127/316 (40%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
++ + ++ + A++ V+ IP I+NA + G H SLLPR
Sbjct: 54 FKFSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIINAPQHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G +I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKESAKINWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L ++ + G +PG V + + + + +Q
Sbjct: 234 WTEAGEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ +F G
Sbjct: 294 LENGKMILASNFFKGA 309
>gi|195575276|ref|XP_002105605.1| GD16480 [Drosophila simulans]
gi|194201532|gb|EDX15108.1| GD16480 [Drosophila simulans]
Length = 388
Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 77/303 (25%), Positives = 132/303 (43%), Gaps = 21/303 (6%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+++F GT F++ +LQAL + + V T L S + V A++ L
Sbjct: 85 KILFFGTDNFSLPSLQALHKNCGDRLGVVTS---------LNSPANCVKTYAEKEKL--- 132
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
L + + + D+ VV+ G +IP I+N G N HASLLP+ RGAAPI
Sbjct: 133 ---SLQKWRIDPSVCPQFDLGEVVSIGQLIPANIINGFPHGMINVHASLLPKRRGAAPII 189
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
AIM GD TG++IMK++ H + R V I ++ L L+ L A +V+ ++
Sbjct: 190 YAIMKGDASTGVSIMKIEPHRFES-ILAQRVVDIKPDVFMPDLHASLATLGADLLVDTVN 248
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
L PQ +YA KI+ T + + + +G
Sbjct: 249 NLSLRLKEAKPQDSTRASYAPKITSKITEIIWSELSAFEIYTRHRALYGYKNLTTSFLGK 308
Query: 244 KHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFL 298
+ + ++L + +PG + + + I C+Q + + +++L+ G + + DF
Sbjct: 309 QVQLLELRLPEKGVPVQEPGVISYLRKSRSLIIGCAQQSQLEVLQLRVEGRKPMSAQDFN 368
Query: 299 LGC 301
G
Sbjct: 369 NGF 371
>gi|195107772|ref|XP_001998482.1| GI23993 [Drosophila mojavensis]
gi|193915076|gb|EDW13943.1| GI23993 [Drosophila mojavensis]
Length = 345
Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 90/307 (29%), Positives = 142/307 (46%), Gaps = 25/307 (8%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+++F GT F++ +L+ L ++ + V T +KS + V A++ L
Sbjct: 38 KILFFGTDNFSLPSLKKLHLNNFDVS-VVTS---------IKSPANCVRSYAEQQKLALY 87
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
++ ++ VVV++G +IP I+NA G N HASLLPRWRGAAPI
Sbjct: 88 RWPISEEQC------AAYELGVVVSFGHLIPLHIINAFSRGIINVHASLLPRWRGAAPIM 141
Query: 124 RAIMAGDNETGIAIMKM-DKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AIM GD +TGI IMK+ D GP+ R++PI S+I L LS L A +V+ +
Sbjct: 142 YAIMEGDTKTGITIMKIAPHQFDIGPILAQREMPIRSDIYMPELHSALSHLGADLLVDTV 201
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRS--AENVHNHIRALSPFPGAWLEMM 240
+ L++ L S Q + TYA KI+ T V + + E + +
Sbjct: 202 NNLDERLLNASAQNDADATYAPKITSKITEVRWSQQTSMELFARYRALYGFKNLTTSFLG 261
Query: 241 IGNKHERIKLLESQLVEGE-GKPGEV----INPNFTIACSQGA-VRIMRLQRAGGRVLDI 294
+ +K LE QL PG + + I C+Q + +++L+ G + +
Sbjct: 262 KAVQLLELKPLEIQLPTSTLLAPGSFYFHRLRKSLMIGCAQKTQLEVLQLRVEGKKPMSA 321
Query: 295 GDFLLGC 301
DF G
Sbjct: 322 HDFNNGF 328
>gi|70730410|ref|YP_260151.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas fluorescens Pf-5]
gi|83287938|sp|Q4KC82|ARNA_PSEF5 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|68344709|gb|AAY92315.1| UDP-D-glucuronate dehydrogenase [Pseudomonas fluorescens Pf-5]
Length = 668
Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 66/291 (22%), Positives = 127/291 (43%), Gaps = 13/291 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V + A ++AL+++ + I +V+T P + +V + +
Sbjct: 1 MSNKAVVFAYHDIGCAGIEALLNAGYEIAAVFTHADDPKEN----TFYGSVAQLCARKGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
E+ N D Y ++ + +L G +N H SLLPR+RG
Sbjct: 57 AVHAPEDANHPLWIERIAKLNPDYLFSFYYRNLLSEPLLATASKGAFNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G+ ETG+ + +M K D G + +V I + L +L A +
Sbjct: 117 APANWVLVKGETETGVTLHRMVKRADAGAIIAQERVAIERSDTALSLHHKLRDAAASLLR 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+ + L Q + + Q E+ +Y + + + ++++ R AE + N +R P+PGA+
Sbjct: 177 DTLPALAQGKITETAQDESKASYFGRRTAADGKIDWQRPAEELFNLVRAVTQPYPGAFCA 236
Query: 239 MMIGNKHERIKLLESQLVEGEG--KPGEVIN-PNFTIACSQGAVRIMRLQR 286
+ ++ + +++ +G PG VI+ IAC Q ++ I QR
Sbjct: 237 VGEH----KLIVWSAEVAKGNEGQAPGRVISVDPLRIACGQDSLVITSGQR 283
>gi|327396452|dbj|BAK13873.1| bifunctional polymyxin resistance ArnA protein [Includes: UDP-
glucuronic acid decarboxylase] ArnA [Pantoea ananatis
AJ13355]
Length = 660
Score = 99.6 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 72/307 (23%), Positives = 140/307 (45%), Gaps = 19/307 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + A + AL+ + +I ++YT + +V + A E S+P
Sbjct: 1 MKTIVFAYHDMGCAGINALLKAGFTISAIYTHADTASENH----FFGSVARIAAENSIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ S DV Y ++ +ILN+ K G +N H SLLP++RG AP
Sbjct: 57 YAPDEVNHPLWIDRIKSAEPDVIFSFYYRNLLCDQILNSAKQGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG+ + +M K D G + ++V I+ N L ++L + + A
Sbjct: 117 LNWALVNGETETGVTLHRMVKKADAGEIIAQQRVAIADEDNALTLHRKLVDCASALLESA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++Q N+ +PQ E T + + + R+N+ A ++N +R P+PGA+
Sbjct: 177 LPAMKQGNIVGTPQNEADATVVGRRTPEDGRINWALPASQINNLVRAVTDPWPGAFAFAG 236
Query: 241 IGNKHERIKLLESQL--VEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + ++++ +PG V++ F +AC +GA+ I Q A +
Sbjct: 237 TT----KFVVWKAKVLSTPHNVRPGTVLSAEPFVVACGEGALEIQTGQTAN------SVY 286
Query: 298 LLGCPVI 304
+ G +
Sbjct: 287 MNGVQLA 293
>gi|329299045|ref|NP_001178320.1| aldehyde dehydrogenase 1 family, member L2 [Bos taurus]
gi|297474978|ref|XP_002687691.1| PREDICTED: aldehyde dehydrogenase 1 family, member L2 [Bos taurus]
gi|296487605|gb|DAA29718.1| aldehyde dehydrogenase 1 family, member L2 [Bos taurus]
Length = 923
Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 78/313 (24%), Positives = 123/313 (39%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+V +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKVALIGQSLFGQEVYSHLCKEGHRVVGVFTVPDKDG-------KADPLALAAEKNGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + S A++ V+ IP +++ K G H S+LPR
Sbjct: 75 VFKFPRWRVKGKTIKEVAEAYRSVGAELNVLPFCTQFIPMDVIDGPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVEPNDTVDALYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K ++++ +SAE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPRIPQSEEGATYEGIQKKENAKISWNQSAEALHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E ++G KPG V + + G A+ + LQ
Sbjct: 255 AWAEINGQVVTFYGSSLLNSSVPPGEPLEIKGAEKPGLVTKNGLVLFGNDGKALMVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 315 FEDGKMIPASQYF 327
>gi|238898044|ref|YP_002923725.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465803|gb|ACQ67577.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 670
Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 74/311 (23%), Positives = 141/311 (45%), Gaps = 22/311 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + L+ L+ + ++I +++T P R S+V A E L
Sbjct: 1 MKAIVFAYHDIGCVGLRTLIDTGYNIQAIFTHTDDPLENR----YFSSVAHLATEMGLTV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ +F D+ Y ++ Q IL+ G +N H SLLPR+RG AP
Sbjct: 57 FAPEEVNHPLWVDRIRAFEPDIIFSFYYRHLLKQDILSIAPQGAFNLHGSLLPRYRGCAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETGI + +M + D GP+ KVPI L +++ V +++
Sbjct: 117 VNWVLVNGETETGITLHQMTEKPDAGPILGQLKVPIHVMDTALILHKKMRVAAQTLLIDL 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ L+++ L L PQ E+ +Y + + + + + +SA ++N +R P+PGA+ +
Sbjct: 177 LPALKKSPLSLQPQSESEASYFGRRTAADGEIYWEKSANEINNLVRAVTEPYPGAFSYI- 235
Query: 241 IGNKHERIKLLESQLVEG-----EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDI 294
+ + S+ V+ + G V+ N FT++C +GA+ I+ Q G
Sbjct: 236 ---DQRKFIIWRSRPVDDLQDTPKQPAGTVLTINPFTVSCGEGALEIITAQSESGL---- 288
Query: 295 GDFLLGCPVII 305
+L G +
Sbjct: 289 --YLQGHHLAE 297
>gi|295097091|emb|CBK86181.1| Methionyl-tRNA formyltransferase [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 660
Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 66/288 (22%), Positives = 127/288 (44%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + QAL+ + I +++T P G +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCTGTQALLDAGFDITAIFTHPDVA----GENHFFGSVARIAAEHGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ DV Y ++ IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDDVNHPLWVDRIQKLAPDVIFSFYYRNLLCDDILSVATKGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG+ + KM + D G + KV I ++ L +L + + +A
Sbjct: 117 LNWALVNGETETGVTLHKMVRRADAGGIVAQLKVGIGADETALELHHKLCIAAQSLLRDA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + Q + Q E+ + + + + R+++ + A +HN +R P+PGA+
Sbjct: 177 LPTIRQGTFTETAQDESKASSFGRRTPEDGRLDWAKPARQLHNLVRAVTDPWPGAYSFAG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQ 285
+ + + +S++ E KPG VI+ + ++C + A+ I+ Q
Sbjct: 237 VS----KFIVWKSRVREDIPAAKPGTVISVSPLIVSCGEQALEIVTGQ 280
>gi|159490324|ref|XP_001703129.1| methionyl-tRNA formyltransferase [Chlamydomonas reinhardtii]
gi|158270759|gb|EDO96594.1| methionyl-tRNA formyltransferase [Chlamydomonas reinhardtii]
Length = 374
Score = 99.2 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 86/334 (25%), Positives = 144/334 (43%), Gaps = 32/334 (9%)
Query: 4 RVVFMGTSEFAVATLQALVSSS------HSIVSVYTQPPRPAGRRGLKS-VLSAVHKKAQ 56
RVVF+GT + A LQ L+++S + V +QP +P GR S V A+
Sbjct: 45 RVVFLGTPDVAAGVLQQLLTASQQPGAQFEVAMVVSQPGKPRGRGNRAVAQPSPVEALAR 104
Query: 57 EFSL-----PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
+ L + D+AV AYG ++PQR L+ +LG N H S
Sbjct: 105 DSGLLAPEAILCPARAKEESFLAALSELQPDLAVTAAYGNMLPQRFLDTPRLGTLNVHPS 164
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLPR+RGAAP+QRA+ G ETG+++ D GPV ++V + +I L +L
Sbjct: 165 LLPRYRGAAPVQRALEDGVRETGVSVAYTVLACDAGPVLAQQRVAVDPDIQAPELLTQLF 224
Query: 172 VLCAHAMVEAMDKLEQNNLPL--SPQIENGITYAEKISKGETRVNFCRS---AENVHNHI 226
L +++ + + PQ E+ + +A K+ + E+ ++F R +
Sbjct: 225 GLGTQLLLDRLPDVWAGRGQQLAVPQDESQVLHAAKLGREESMLDFARDSAEVTHNRVRG 284
Query: 227 RALSPFPGAWLEMMIG----NKHERIKLLESQLVEGE--GKPGEVI---NPNFTI--ACS 275
A P A E+ ++ +K+L ++L G G I + AC
Sbjct: 285 FAGWPGTSARFEVTDEASGASEVIEVKILRTRLPSHSAPGAAGAAIVFEGDAMLVPCACG 344
Query: 276 QGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
G + ++++Q + + D+ G G +
Sbjct: 345 -GVLEVLQVQPPTKKAMAAKDWKNGLR---GKRL 374
>gi|224095411|ref|XP_002196775.1| PREDICTED: aldehyde dehydrogenase 1 family, member L2 [Taeniopygia
guttata]
Length = 931
Score = 99.2 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 73/310 (23%), Positives = 120/310 (38%), Gaps = 23/310 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 31 KLKLALIGQSIFGQEVYNKLRKEGHKVVGVFTVPDKNG-------QADPLALAAEKDGTP 83
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + S A++ V+ IP +++ K G H S+LPR
Sbjct: 84 VFKFPRWRAKGKPIQEVVAAYKSVGAELNVLPFCTQFIPMDVIDCPKHGSIIYHPSILPR 143
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G I D LDTGP+ R+ + N L
Sbjct: 144 HRGASAINWTLIQGDKKAGFTIFWADDGLDTGPILLQRECDVGQNDTVDDLYNRFLFPEG 203
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ + G TY K +++ + A +HN IR PG
Sbjct: 204 IKAMVEAVHLIADGKAPRIPQPKEGATYEGIQKKENAEISWNQPAAALHNWIRGHDKVPG 263
Query: 235 AWLEMMIG-NKHERIKLLESQL-------VEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW + LL++ + ++G +PG V + + G V + LQ
Sbjct: 264 AWATINGQVVTFYGSSLLDASVPAGQELAIKGASRPGLVTKNGLVVFGNDGKMVLVRNLQ 323
Query: 286 RAGGRVLDIG 295
G+++
Sbjct: 324 FEDGKMIPAS 333
>gi|168466000|ref|ZP_02699870.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|195631191|gb|EDX49751.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
Length = 660
Score = 98.8 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 64/288 (22%), Positives = 132/288 (45%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAGLGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWIDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGDIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEIITGQ 280
>gi|168242418|ref|ZP_02667350.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|194449563|ref|YP_002046353.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|200386760|ref|ZP_03213372.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|226723724|sp|B4TBG6|ARNA_SALHS RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|194407867|gb|ACF68086.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|199603858|gb|EDZ02403.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205338264|gb|EDZ25028.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
Length = 660
Score = 98.8 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 64/288 (22%), Positives = 132/288 (45%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAGLGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWIDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGDIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEIITGQ 280
>gi|289812281|ref|ZP_06542910.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 422
Score = 98.8 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 65/288 (22%), Positives = 132/288 (45%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAGLGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGNIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEIITGQ 280
>gi|16761225|ref|NP_456842.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|56412803|ref|YP_149878.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197361737|ref|YP_002141373.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|213053538|ref|ZP_03346416.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213417697|ref|ZP_03350821.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213427757|ref|ZP_03360507.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213581703|ref|ZP_03363529.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213648589|ref|ZP_03378642.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213858059|ref|ZP_03385030.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289829670|ref|ZP_06547211.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|21542318|sp|Q8Z540|ARNA_SALTI RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|81599859|sp|Q5PNA6|ARNA_SALPA RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|226723726|sp|B5BCP6|ARNA_SALPK RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|25511861|pir||AB0794 probable lipopolysaccharide modification protein STY2529 [imported]
- Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16503524|emb|CAD07532.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Typhi]
gi|56127060|gb|AAV76566.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197093213|emb|CAR58657.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
Length = 660
Score = 98.8 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 65/288 (22%), Positives = 132/288 (45%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAGLGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGNIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEIITGQ 280
>gi|193217009|ref|YP_002000251.1| methionyl-tRNA formyltransferase [Mycoplasma arthritidis 158L3-1]
gi|193002332|gb|ACF07547.1| methionyl-tRNA formyltransferase [Mycoplasma arthritidis 158L3-1]
Length = 285
Score = 98.8 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 73/293 (24%), Positives = 140/293 (47%), Gaps = 15/293 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
++++ GT F+ ++L+ + +V + +QP R A R +L+ V K A+E+ +
Sbjct: 4 KIKIILAGTGTFSAKIFKSLLDNDRFEVVGLISQPNR-ALDRSKNVILTPVAKLAKEYQV 62
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L +E ++ D + AYG +IP IL K N H S+L ++RGAA
Sbjct: 63 -TLFQPNKIKEIVDELKEREFDFFITAAYGQIIPNDILALPKKAAINVHGSILEKYRGAA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI+ + ETGI+++ M +D G + + KV I + + +L+ + +
Sbjct: 122 PVQHAILNDEKETGISLIYMIDKMDAGDIIAIEKVQIEEDDTALEIYDKLAKVAIENLPL 181
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+DKL +N + + Q E+ +T+A KI + ++ S + N IRA + PGA+
Sbjct: 182 WLDKLYKNEIIATKQDESKVTFASKIKNEDAELHLEMSTKEALNKIRAFNDQPGAF---- 237
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLD 293
I +R+K+ ++ + + + + G + ++ Q G + +
Sbjct: 238 IVKNQKRLKIFQATNQKNKSP--------LVLEFADGKLYLIEYQFEGKKRIK 282
>gi|255644416|gb|ACU22713.1| unknown [Glycine max]
Length = 353
Score = 98.8 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 78/329 (23%), Positives = 138/329 (41%), Gaps = 28/329 (8%)
Query: 5 VVFMGTSEFAVATLQALV------SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
+V +G + L+AL+ SS + ++ TQP RG K LS + A +
Sbjct: 26 LVLLGAPHVSAIVLEALLNASTCPDSSFEVAAIVTQPAARR-DRGKKLSLSPLASHALQR 84
Query: 59 S----LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
L + + + AYG ++P L+ G N H SLLP
Sbjct: 85 GFSPDLIFSPLRAGDDTFLSNLKALQPHLCITAAYGNILPTDFLHIPSFGTVNIHPSLLP 144
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
+RGAAP+QRA+ G ETG+++ + LD GPV + + I L + L
Sbjct: 145 LYRGAAPVQRALQDGVKETGVSLAFTVRALDAGPVIATETIQVDDQIKAPDLLELLFHKG 204
Query: 175 AHAMVEAMDKLEQN--NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ ++ + + + PQ ++ T A KI+ E+ + F + A +HN +RA S +
Sbjct: 205 SKLLIGELPSILDGSARVKAQPQDDSKATLAPKINPDESWLFFDQEASVLHNKVRAFSGW 264
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEGEGKPGE-----------VINPNFTIACSQGA-VR 280
PG +++ K+ + K LE +++ + E + C +G +
Sbjct: 265 PGTRARVLVVEKNGQQKTLEIKIITTRVRSHESVQFDEADDIAFVEGALVFPCGRGTTLE 324
Query: 281 IMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
++ +Q G +V++ F G G +
Sbjct: 325 VLEVQLPGKKVVNSAAFWNGLR---GQKL 350
>gi|194445983|ref|YP_002041560.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|226723725|sp|B4SYX1|ARNA_SALNS RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|194404646|gb|ACF64868.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
Length = 660
Score = 98.8 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 64/288 (22%), Positives = 132/288 (45%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAGLGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGDIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEIITGQ 280
>gi|167549705|ref|ZP_02343464.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205325391|gb|EDZ13230.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
Length = 660
Score = 98.8 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 64/288 (22%), Positives = 132/288 (45%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAGLGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGDIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEIITGQ 280
>gi|258614264|ref|ZP_05712034.1| methionyl-tRNA formyltransferase [Enterococcus faecium DO]
Length = 109
Score = 98.8 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT ++VFMGT F+V L+ L+ S + I +V TQP RP G R + V + A + +
Sbjct: 1 MT-KLVFMGTPAFSVPILEGLIESGYEIQAVVTQPDRPVG-RKRVITPTPVKEAALKHGI 58
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGH 109
L P K+ E E+ + DV V A+G +P+++L KLG N H
Sbjct: 59 RVLQPEKISGSPEMEEIIELVPDVIVTAAFGQFLPEKLLQVPKLGAINVH 108
>gi|291389967|ref|XP_002711492.1| PREDICTED: aldehyde dehydrogenase 1 family, member L1-like
[Oryctolagus cuniculus]
Length = 923
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 77/313 (24%), Positives = 123/313 (39%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYNHLRKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + S A++ V+ IP +++ K G H S+LPR
Sbjct: 75 VFKFPRWRVKGKTIKEVAEAYRSVGAELNVLPFCTQFIPMDVIDGPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G+++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLIMGDKKAGLSVFWADDGLDTGPILLQRSCEVQPNDTVDTLYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K +++ +SAE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPRIPQPEEGATYEGIQKKENAEISWDQSAEVLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E ++G KPG V + + G A+ + LQ
Sbjct: 255 AWTEINGQMVTFYGSSLLNSSVPPGEPLEIKGAKKPGLVTKNGLVLYGNDGKALMVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 315 FEDGKMIPASQYF 327
>gi|62088178|dbj|BAD92536.1| aldehyde dehydrogenase 1 family, member L1 variant [Homo sapiens]
Length = 954
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 71/317 (22%), Positives = 128/317 (40%), Gaps = 24/317 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
T+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 52 TMKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVP 104
Query: 62 ALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ + ++ + A++ V+ IP I++A + G H SLLPR
Sbjct: 105 VFKYSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPR 164
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G +I D LDTG + ++ + + + L
Sbjct: 165 HRGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEG 224
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PG
Sbjct: 225 IKGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPG 284
Query: 235 AWLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRL 284
AW E L ++ + G +PG V + + + + +
Sbjct: 285 AWTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNI 344
Query: 285 QRAGGRVLDIGDFLLGC 301
Q G+++ +F G
Sbjct: 345 QLEDGKMILASNFFKGA 361
>gi|51491203|emb|CAH18667.1| hypothetical protein [Homo sapiens]
gi|190690081|gb|ACE86815.1| aldehyde dehydrogenase 1 family, member L1 protein [synthetic
construct]
gi|190691455|gb|ACE87502.1| aldehyde dehydrogenase 1 family, member L1 protein [synthetic
construct]
Length = 912
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 71/317 (22%), Positives = 128/317 (40%), Gaps = 24/317 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
T+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 10 TMKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVP 62
Query: 62 ALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ + ++ + A++ V+ IP I++A + G H SLLPR
Sbjct: 63 VFKYSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPR 122
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G +I D LDTG + ++ + + + L
Sbjct: 123 HRGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEG 182
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PG
Sbjct: 183 IKGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPG 242
Query: 235 AWLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRL 284
AW E L ++ + G +PG V + + + + +
Sbjct: 243 AWTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNI 302
Query: 285 QRAGGRVLDIGDFLLGC 301
Q G+++ +F G
Sbjct: 303 QLEDGKMILASNFFKGA 319
>gi|16765626|ref|NP_461241.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167992635|ref|ZP_02573732.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|197264681|ref|ZP_03164755.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|6136698|sp|O52325|ARNA_SALTY RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|2921421|gb|AAC04772.1| unknown [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|16420839|gb|AAL21200.1| putative transformylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|197242936|gb|EDY25556.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|205329208|gb|EDZ15972.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261247507|emb|CBG25334.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267994392|gb|ACY89277.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158857|emb|CBW18370.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312913289|dbj|BAJ37263.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321223000|gb|EFX48071.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|323130629|gb|ADX18059.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|332989232|gb|AEF08215.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 660
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 65/288 (22%), Positives = 134/288 (46%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V ++A E +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRQAAELGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGDIPSVPQRESDSTYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRMCPDAQGALPGSVISVSPLRVACADGALEIITGQ 280
>gi|311256551|ref|XP_001926622.2| PREDICTED: probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2
[Sus scrofa]
Length = 642
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 79/313 (25%), Positives = 124/313 (39%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSHLCREGHQVVGVFTVPDKDG-------KADPLALAAEKNGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + S A++ V+ IP I+ + K G H S+LPR
Sbjct: 75 VFKFPRWRAKGKTIKEVAEAYRSVGAELNVLPFCTQFIPMDIIESPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I R ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAIHRTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVQPNDTVDALYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K +++ +SAE++HN IR PG
Sbjct: 195 IKAMVEAVQLVADGKAPRIPQSEEGATYEGIQKKENAEISWDQSAEDLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E ++G KPG V + + G A+ + LQ
Sbjct: 255 AWTEINGQVVTFYGSSLLNSSVPPGEPLEIKGAKKPGLVTKNGLVLFGNDGKALMVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 315 FEDGKMIPASQYF 327
>gi|109098532|ref|XP_001089566.1| PREDICTED: probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2
[Macaca mulatta]
Length = 923
Score = 98.4 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 80/313 (25%), Positives = 123/313 (39%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSHLRKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
K + + S AD+ V+ IP I+++ K G H S+LPR
Sbjct: 75 VFKLPKWRVKGKTIKEVAEAYRSVGADLNVLPFCTQFIPMDIIDSPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVEPNDTVDALYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K +++ +SAE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPRIPQPEEGATYEGIQKKENAEISWDQSAEVLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E ++G KPG V + + G A+ + LQ
Sbjct: 255 AWTEINGQMVTFYGSTLLNSSVPPGEPLEIKGAKKPGLVTKNGLVLFGNDGKALMVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 315 FEDGKMIPASQYF 327
>gi|168261684|ref|ZP_02683657.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|205349416|gb|EDZ36047.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
Length = 660
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 64/288 (22%), Positives = 132/288 (45%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYDIAAIFTHADNPAEN----TFFGSVSRLAAGLGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGDIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEIITGQ 280
>gi|161612976|ref|YP_001586941.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|189046232|sp|A9N5B2|ARNA_SALPB RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|161362340|gb|ABX66108.1| hypothetical protein SPAB_00682 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 660
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 64/288 (22%), Positives = 132/288 (45%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYDIAAIFTHADNPAEN----TFFGSVSRLAAGLGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGDIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEIITGQ 280
>gi|134099237|ref|YP_001104898.1| methionyl-tRNA formyltransferase [Saccharopolyspora erythraea NRRL
2338]
gi|291007150|ref|ZP_06565123.1| methionyl-tRNA formyltransferase [Saccharopolyspora erythraea NRRL
2338]
gi|133911860|emb|CAM01973.1| methionyl-tRNA formyltransferase [Saccharopolyspora erythraea NRRL
2338]
Length = 314
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 74/308 (24%), Positives = 130/308 (42%), Gaps = 17/308 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G TL+AL+ S H +V V T P + K +V A+ +P
Sbjct: 1 MRVVMFGYQTPGYRTLEALLGSQHEVVQVVTHP--KSDHAYEKIWDDSVADLAENNGVPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
LV + E +Q D+ V + +P + N G N H SLLP + G AP+
Sbjct: 59 LVRNRPDDELPKQLKEVEPDIIVATNWRTWLPPEVFNLPSNGTLNVHDSLLPAYAGFAPL 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ + G+ MD+ +D G + R VP+ + L + L +E++
Sbjct: 119 IWALINGEKQVGVTAHIMDEGIDAGDIVLQRAVPVGATDTATDLFNKTIGLYGPIALESL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D + + + Q + ++ K S ++R+++ A++V N +RA +
Sbjct: 179 DLIASGSAEFTEQDRSKASFFHKRSVEDSRIDWTWPAQDVANLVRAQ---SDPYPNAFTF 235
Query: 243 NKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAGGR 290
++ ERI++L + + E G PG + I A + I R++ G
Sbjct: 236 HRGERIRVLAASVSEKTYGGTPGRIFIPEGDGVVIVAGADARRGRNRGLVIERVRTDDGT 295
Query: 291 VLDIGDFL 298
L D+
Sbjct: 296 ELAAADYF 303
>gi|330002245|ref|ZP_08304256.1| methionyl-tRNA formyltransferase [Klebsiella sp. MS 92-3]
gi|328537384|gb|EGF63633.1| methionyl-tRNA formyltransferase [Klebsiella sp. MS 92-3]
Length = 253
Score = 98.0 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 80/235 (34%), Positives = 129/235 (54%), Gaps = 11/235 (4%)
Query: 82 DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMD 141
D+ VVVAYGL++P+ +L +LG N H SLLPRWRGAAPIQR++ AGD+ETG+ IM+MD
Sbjct: 22 DIMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDSETGVTIMQMD 81
Query: 142 KHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGIT 201
LDTG + + PI++ + L +L+ L ++ + +L Q E+ +
Sbjct: 82 VGLDTGDMLYKLSCPITAEDTSGSLYDKLAELGPQGLLATLAQLANGTARPEVQDESLVC 141
Query: 202 YAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVE--GE 259
+AEK+SK E R+++ SA + IRA +P+P +WLE+ + +K+ + ++
Sbjct: 142 HAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEI----DGQPVKVWRASVIAEAAH 197
Query: 260 GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP--VIIGCIV 309
+PG ++ +A G + + LQ AG + + D L I G +
Sbjct: 198 AEPGTIVAATKQGIQVATGDGILSLESLQPAGKKAMSAQDLLNSRREWFIPGTRL 252
>gi|68536867|ref|YP_251572.1| putative formyltransferase [Corynebacterium jeikeium K411]
gi|311740330|ref|ZP_07714160.1| methionyl-tRNA formyltransferase [Corynebacterium pseudogenitalium
ATCC 33035]
gi|68264466|emb|CAI37954.1| putative formyltransferase [Corynebacterium jeikeium K411]
gi|311304613|gb|EFQ80686.1| methionyl-tRNA formyltransferase [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 314
Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 76/313 (24%), Positives = 135/313 (43%), Gaps = 20/313 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV G + TL A++++ H +V V T P + + +V + A E L
Sbjct: 1 MRVAVFGYQSWGHRTLSAVINAGHEVVLVVTHP--ASDHPYEQMWADSVEELASEHELQV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
V ++GQ+ E D+ V + +P + + K G N H LLP + G +PI
Sbjct: 59 CVTERVGQDVIEALRDAAPDIIVANNWRTWLPPEVFSLAKHGALNVHDGLLPEYAGFSPI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ + G+ + +MD+ LD GP+ R +P+ T L + L + A+
Sbjct: 119 LWALLNRETHVGVTVHEMDEVLDGGPIVAQRAIPVGPQDTTTDLVAKTIDLIEPLVERAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMMI 241
+ Q PQ TY K + E+R++F + AE++ +RA P+P A+ E
Sbjct: 179 SDVAQGTATAQPQDPTRATYFHKRGEQESRIDFTQPAEDIALLVRAQSDPYPNAYFEF-- 236
Query: 242 GNKHERIKLLESQLVEGE--GKPGEV---INPNFTIACSQ-------GAVRIMRLQRAGG 289
+ +R+++L + + +G G PG V + C A+ + R++
Sbjct: 237 --RGQRVRVLSAHVSQGRFGGTPGRVTIPHEGGIAVVCGSPRANVPAPAIVLDRVRLDDN 294
Query: 290 RVLDIGDFLLGCP 302
L +F G
Sbjct: 295 SELTATEFF-GHR 306
>gi|332817785|ref|XP_516714.3| PREDICTED: aldehyde dehydrogenase family 1 member L1 [Pan
troglodytes]
Length = 1201
Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 71/317 (22%), Positives = 128/317 (40%), Gaps = 24/317 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
T+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 185 TMKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVP 237
Query: 62 ALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ + ++ + A++ V+ IP I++A + G H SLLPR
Sbjct: 238 VFKFSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPR 297
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G +I D LDTG + ++ + + + L
Sbjct: 298 HRGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEG 357
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PG
Sbjct: 358 IKGMVQAVRLISEGKAPRLPQPEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPG 417
Query: 235 AWLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRL 284
AW E L ++ + G +PG V + + + + +
Sbjct: 418 AWTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNI 477
Query: 285 QRAGGRVLDIGDFLLGC 301
Q G+++ +F G
Sbjct: 478 QLEDGKMILASNFFKGA 494
>gi|58332368|ref|NP_001011027.1| aldehyde dehydrogenase family 1 member L1 [Xenopus (Silurana)
tropicalis]
gi|82197998|sp|Q63ZT8|AL1L1_XENTR RecName: Full=Aldehyde dehydrogenase family 1 member L1; AltName:
Full=Cytosolic 10-formyltetrahydrofolate dehydrogenase;
Short=10-FTHFDH; Short=FDH
gi|52354744|gb|AAH82822.1| formyltetrahydrofolate dehydrogenase [Xenopus (Silurana)
tropicalis]
gi|89267395|emb|CAJ82649.1| aldehyde dehydrogenase 1 family, member L1 [Xenopus (Silurana)
tropicalis]
Length = 902
Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 68/313 (21%), Positives = 121/313 (38%), Gaps = 24/313 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F + L+ H +V V+T P + + A++ +P
Sbjct: 1 MKIAVIGQSLFGREVYRELLKEGHQVVGVFTIPDKNG-------KADPLGADAEKDGIPV 53
Query: 63 LVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ + E++ + A++ V+ IP +++ K G H S+LPR
Sbjct: 54 FKFPRWRVKGQAIPEVVEKYKALEAELNVLPFCSQFIPMEVIDCPKHGSIIYHPSILPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPI-SSNINTAGLQQELSVLCA 175
RGA+ I +M GD G I D LDTG + R+ + + + L
Sbjct: 114 RGASAINWTLMQGDKIGGFTIFWADDGLDTGDILLQRECEVLPDDTVNTIYNRFLFPEGV 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MVEA+ + + N P Q G TY K ++N+ + AE +HN IR PGA
Sbjct: 174 KGMVEAVRLIAEGNAPRIKQATEGATYDPMQKKENAKINWDQPAEAIHNFIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLLESQLVEGEGKPGEV---------INPNFTIACSQG-AVRIMRLQ 285
W + S +G+P E+ + + G + + +Q
Sbjct: 234 WTVVGDQQLTFFGSSFISNGPAPDGQPLEIPGAFRPAVVTKTGLVLFGNDGQKLSVKNIQ 293
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 294 FEDGKMIPASQYY 306
>gi|1906539|gb|AAB50348.1| methionyl-tRNA formyltransferase homolog [Clostridium
acetobutylicum ATCC 824]
Length = 167
Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/156 (37%), Positives = 88/156 (56%), Gaps = 4/156 (2%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
MGT EF+V +L+ L+ + + + +V TQP +P G RG K +S V + A + ++P P K
Sbjct: 1 MGTPEFSVPSLEKLIEN-YDVRAVLTQPDKPKG-RGKKLAMSEVKEVAVKNNIPVFQPVK 58
Query: 68 LGQEEYEQF--LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
L + D VVVA+G ++ + +L+ K N HASLLP +RGAAPI A
Sbjct: 59 LKNDIEVINKLKEIAPDFIVVVAFGQILSKEVLDIPKYACINLHASLLPNYRGAAPINWA 118
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNI 161
I+ G+ +TG M M + LDTG + +V I ++
Sbjct: 119 IINGETKTGNTTMIMAEGLDTGDMLLKDEVDIKRDM 154
>gi|262040753|ref|ZP_06013984.1| methionyl-tRNA formyltransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041897|gb|EEW42937.1| methionyl-tRNA formyltransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 253
Score = 98.0 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 80/235 (34%), Positives = 128/235 (54%), Gaps = 11/235 (4%)
Query: 82 DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMD 141
D+ VVVAYGL++P+ +L +LG N H SLLPRWRGAAPIQR++ AGD+ETG+ IM+MD
Sbjct: 22 DIMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDSETGVTIMQMD 81
Query: 142 KHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGIT 201
LDTG + + PI++ + L +L+ L ++ + +L Q E+ +
Sbjct: 82 VGLDTGDMLYKLSCPITAEDTSGSLYDKLAELGPQGLLATLAQLANGTARPEVQDESLVC 141
Query: 202 YAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVE--GE 259
+AEK+SK E R+++ SA + IRA +P+P +WLE+ + +K+ + +
Sbjct: 142 HAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEI----DGQPVKVWRASVSAEAAH 197
Query: 260 GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP--VIIGCIV 309
+PG ++ +A G + + LQ AG + + D L I G +
Sbjct: 198 AEPGTIVAATKQGIQVATGDGILSLESLQPAGKKAMSAQDLLNSRREWFIPGTRL 252
>gi|307684336|dbj|BAJ20208.1| aldehyde dehydrogenase 1 family, member L1 [synthetic construct]
Length = 902
Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/316 (22%), Positives = 127/316 (40%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
++ + ++ + A++ V+ IP I++A + G H SLLPR
Sbjct: 54 FKYSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G +I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L ++ + G +PG V + + + + +Q
Sbjct: 234 WTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ +F G
Sbjct: 294 LEDGKMILASNFFKGA 309
>gi|297285193|ref|XP_002802729.1| PREDICTED: 10-formyltetrahydrofolate dehydrogenase-like isoform 2
[Macaca mulatta]
Length = 912
Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 71/317 (22%), Positives = 128/317 (40%), Gaps = 24/317 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
T+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 10 TMKIAVIGQSLFGQEVYGHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVP 62
Query: 62 ALVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ + ++ + A++ V+ IP I+NA + G H SLLPR
Sbjct: 63 VFKFSRWRAKGQALPEVVAKYQALGAELNVLPFCSQFIPMEIINAPRHGSIIYHPSLLPR 122
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G +I D LDTG + ++ + + + L
Sbjct: 123 HRGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEG 182
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
MV+A+ + + P PQ E G TY K ++++ + AE +HN IR PG
Sbjct: 183 IKGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKIDWDQPAEAIHNWIRGNDKVPG 242
Query: 235 AWLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRL 284
AW E L ++ + G +PG V + + + + +
Sbjct: 243 AWTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNI 302
Query: 285 QRAGGRVLDIGDFLLGC 301
Q G+++ +F G
Sbjct: 303 QLEDGKMILASNFFKGA 319
>gi|62896947|dbj|BAD96414.1| formyltetrahydrofolate dehydrogenase isoform a variant [Homo
sapiens]
Length = 902
Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/316 (22%), Positives = 127/316 (40%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
++ + ++ + A++ V+ IP I++A + G H SLLPR
Sbjct: 54 FKYSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G +I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L ++ + G +PG V + + + + +Q
Sbjct: 234 WTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDRMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ +F G
Sbjct: 294 LEDGKMILASNFFKGA 309
>gi|62896629|dbj|BAD96255.1| formyltetrahydrofolate dehydrogenase isoform a variant [Homo
sapiens]
Length = 902
Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/316 (22%), Positives = 127/316 (40%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
++ + ++ + A++ V+ IP I++A + G H SLLPR
Sbjct: 54 FKYSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G +I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L ++ + G +PG V + + + + +Q
Sbjct: 234 WTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ +F G
Sbjct: 294 LEDGKMILASNFFKGA 309
>gi|20072652|gb|AAH27241.1| ALDH1L1 protein [Homo sapiens]
gi|119599776|gb|EAW79370.1| aldehyde dehydrogenase 1 family, member L1, isoform CRA_a [Homo
sapiens]
gi|325463247|gb|ADZ15394.1| aldehyde dehydrogenase 1 family, member L1 [synthetic construct]
Length = 505
Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/316 (22%), Positives = 127/316 (40%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
++ + ++ + A++ V+ IP I++A + G H SLLPR
Sbjct: 54 FKYSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G +I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L ++ + G +PG V + + + + +Q
Sbjct: 234 WTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ +F G
Sbjct: 294 LEDGKMILASNFFKGA 309
>gi|21614513|ref|NP_036322.2| aldehyde dehydrogenase family 1 member L1 [Homo sapiens]
gi|59802911|sp|O75891|AL1L1_HUMAN RecName: Full=Aldehyde dehydrogenase family 1 member L1; AltName:
Full=Cytosolic 10-formyltetrahydrofolate dehydrogenase;
Short=10-FTHFDH; Short=FDH
gi|119599777|gb|EAW79371.1| aldehyde dehydrogenase 1 family, member L1, isoform CRA_b [Homo
sapiens]
gi|190690079|gb|ACE86814.1| aldehyde dehydrogenase 1 family, member L1 protein [synthetic
construct]
gi|190691453|gb|ACE87501.1| aldehyde dehydrogenase 1 family, member L1 protein [synthetic
construct]
Length = 902
Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/316 (22%), Positives = 127/316 (40%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
++ + ++ + A++ V+ IP I++A + G H SLLPR
Sbjct: 54 FKYSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G +I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L ++ + G +PG V + + + + +Q
Sbjct: 234 WTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ +F G
Sbjct: 294 LEDGKMILASNFFKGA 309
>gi|295396145|ref|ZP_06806328.1| methionyl-tRNA formyltransferase [Brevibacterium mcbrellneri ATCC
49030]
gi|294971086|gb|EFG46978.1| methionyl-tRNA formyltransferase [Brevibacterium mcbrellneri ATCC
49030]
Length = 161
Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/153 (36%), Positives = 84/153 (54%), Gaps = 2/153 (1%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R+VF GT AV L AL H +V+V T+P P G R S V A E + +
Sbjct: 5 RIVFAGTPSVAVPALHALRE-HHQVVAVLTRPDAPVG-RKRIMTPSPVKTAALEAGIDVI 62
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+ + E E+ + +V VVAYG ++ L+ G++N H SLLP +RGAAP+Q
Sbjct: 63 EASHVDDEVCERIAQYQPNVGAVVAYGALLKDNALSLPTHGWFNLHFSLLPAYRGAAPVQ 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
A++ G+ TG+ + ++D+ +DTGPV R+ P
Sbjct: 123 WALINGEATTGLTVFQLDRGMDTGPVLDQREYP 155
>gi|256375237|ref|YP_003098897.1| formyl transferase domain protein [Actinosynnema mirum DSM 43827]
gi|255919540|gb|ACU35051.1| formyl transferase domain protein [Actinosynnema mirum DSM 43827]
Length = 316
Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 73/280 (26%), Positives = 124/280 (44%), Gaps = 13/280 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TLQAL+ S H + V T P + + +V A+E +
Sbjct: 1 MRVVMFGYQTWGHRTLQALLDSEHEVALVVTHP--KSDHAYERIWSDSVADLAEEHGIEV 58
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L+ + EE + + DV V + IP ++ N K G N H SLLP + G +P
Sbjct: 59 LIRERPDDEELLTRLKEVDPDVIVATNWRTWIPPKVFNLPKRGTLNVHDSLLPAYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ + E G+ MD LD G V R VP+ TA L + L V+
Sbjct: 119 LIWALINDEKEVGVTAHMMDDTLDAGDVVLQRAVPVGPRDTTADLFHKTLELFGPITVDG 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS-PFPGAWLEMM 240
+ +L +PQ + ++ K S+ + RV++ +AE + +RA P+P A+
Sbjct: 179 LAELASGRTEFTPQDRSRASFFHKRSEEDLRVDWTWTAEELDRLVRAQCAPYPSAYAF-- 236
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACS 275
++ R++++E+++ G PG + I
Sbjct: 237 --HRGRRLEIVEAEVSRENYGGTPGRIFYREGDGVAIVAG 274
>gi|291532991|emb|CBL06104.1| hypothetical protein MHY_11520 [Megamonas hypermegale ART12/1]
Length = 72
Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 1 MTLR-VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M ++ +VFMGT EFAV L +++ +++ +VYTQP RP G RG K +S V + A + +
Sbjct: 1 MPIKNIVFMGTPEFAVPCLD-ILNQHYNVTAVYTQPDRPKG-RGQKLAMSPVKEYALKHN 58
Query: 60 LPALVPTKLGQEE 72
LP P K +
Sbjct: 59 LPVYQPEKSKHQN 71
>gi|296393729|ref|YP_003658613.1| formyl transferase domain-containing protein [Segniliparus rotundus
DSM 44985]
gi|296180876|gb|ADG97782.1| formyl transferase domain protein [Segniliparus rotundus DSM 44985]
Length = 313
Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 17/310 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+V G + TLQAL+ S H +V T P R +V + A+E +P
Sbjct: 1 MRIVSFGYQTWGRKTLQALIDSKHQVVLAVTHPASEDSYR--AIWSDSVEELAREHGIPT 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
V + ++ + F+ DV VV ++ +P + G N H SLLP++ G +P+
Sbjct: 59 HVTERADKDTIDLVKRFDPDVIVVNSWYSWMPPELYEMPPHGTLNLHDSLLPKFTGFSPV 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
++++G+ E G+ + +MD+ LDTG + R +PI L L A+ EA+
Sbjct: 119 LWSLISGETEFGLTVHRMDEQLDTGDILVQRALPIPPGATGTELVLAGLDLIPEALNEAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D LE PQ ++ TY K S+ ++RV++ AE++ +RAL +
Sbjct: 179 DALESGTAVWRPQKKDERTYFHKRSERDSRVDWSWPAEDLERFVRAL---SEPYPRAYSH 235
Query: 243 NKHERIKLLESQLVEGE--GKPGEVI--NPNFTIAC-------SQGAVRIMRLQRAGGRV 291
+ E+I++L + + + G PG V+ + C + I R++ A G+
Sbjct: 236 YRGEKIEILSATVSQARYGGVPGRVMAQEGGGVVVCGPDPHRGGNFGLLITRVRDAAGQE 295
Query: 292 LDIGDFL-LG 300
G+F G
Sbjct: 296 HSAGEFFVRG 305
>gi|301597485|ref|ZP_07242493.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii AB059]
Length = 146
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 70/144 (48%), Positives = 88/144 (61%), Gaps = 7/144 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++F GT EFA L AL+ +SH I++VYTQP R AG RG K S V + A E ++P
Sbjct: 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAG-RGQKLTPSPVKQLALEHNIPV 59
Query: 63 LVPTKLGQEEYEQFLSFNA------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
P E + DV VV AYGL++PQ +L+ K G N H SLLPRW
Sbjct: 60 YQPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRW 119
Query: 117 RGAAPIQRAIMAGDNETGIAIMKM 140
RGAAPIQRAI GD+ETGI IM+M
Sbjct: 120 RGAAPIQRAIATGDDETGITIMQM 143
>gi|224583216|ref|YP_002637014.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|254806288|sp|C0Q069|ARNA_SALPC RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|224467743|gb|ACN45573.1| hypothetical protein SPC_1412 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 660
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 64/288 (22%), Positives = 132/288 (45%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAGLGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGDIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGVLPGSVISVSPLRVACADGALEIITGQ 280
>gi|83287939|sp|P0C0R6|ARNA_SALCH RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
Length = 660
Score = 97.3 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 64/288 (22%), Positives = 132/288 (45%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAGLGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ ++P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGDIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGVLPGSVISVSPLRVACADGALEIITGQ 280
>gi|300796253|ref|NP_001178707.1| probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2 [Rattus
norvegicus]
Length = 923
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 77/313 (24%), Positives = 122/313 (38%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L+ H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSHLLKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + S A++ V+ IP I+++ + G H SLLPR
Sbjct: 75 VFKFPRWRVKGKTIKEVAEAYQSVGAELNVLPFCTQFIPMDIIDSPEHGSIIYHPSLLPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVKPNDTVDSLYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P +PQ E G TY K + + + AE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPRTPQPEEGATYEGIQKKENAEIPWDQPAEVLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E + G KPG V + + G A+ + LQ
Sbjct: 255 AWAEIDGQMVTFYGSSLLTSSVPAGEPLDIRGAKKPGLVTKNGLVLFGNDGKALMVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 315 FEDGKMIPASQYF 327
>gi|238749465|ref|ZP_04610970.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia rohdei ATCC 43380]
gi|238712120|gb|EEQ04333.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia rohdei ATCC 43380]
Length = 654
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 81/292 (27%), Positives = 140/292 (47%), Gaps = 19/292 (6%)
Query: 18 LQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL-VPTKLGQEEYEQF 76
L+ALV + + I +V+T P R S+V K A + LP E+
Sbjct: 3 LKALVEAGYDIQAVFTHTDSPNENR----FFSSVAKVAADLELPVFAPEDVNHPLWIERI 58
Query: 77 LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIA 136
DV Y +I + IL++ G +N H SLLP++RG API A++ G+ ETG+
Sbjct: 59 QQLQPDVIFSFYYRNMICEEILSSAPRGGFNLHGSLLPKYRGRAPINWALVNGEKETGVT 118
Query: 137 IMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQI 196
+ +M D GP+ KV IS L ++ L + + + K++Q LPL PQ
Sbjct: 119 LHQMVAKADAGPIVGQHKVSISDTDTALTLHAKVRDLAQALLRDVLPKMKQAPLPLVPQN 178
Query: 197 ENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIGNKHERIKLLESQL 255
E TY + ++ + +++ +SA ++N +R P+PGA+ + ++ + S+
Sbjct: 179 EADATYFGRRTEADGEIHWQKSASEINNLVRAVTEPYPGAFSYLG----QRKLVIWRSRP 234
Query: 256 VE-GEGK-PGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVI 304
++ GK PG V++ + +AC +GA+ I+ Q G ++ G +
Sbjct: 235 LDMAHGKLPGTVLSTSPLIVACGEGALEIITGQSE------AGLYVQGSRLT 280
>gi|195452856|ref|XP_002073530.1| GK13097 [Drosophila willistoni]
gi|194169615|gb|EDW84516.1| GK13097 [Drosophila willistoni]
Length = 344
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 81/306 (26%), Positives = 140/306 (45%), Gaps = 23/306 (7%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+++F GT F++ +L+AL + + V T KS + V A++ +LP
Sbjct: 37 KILFFGTDHFSLPSLKALHKNGSHQLGVVTS---------FKSPANCVRVFAEQANLPL- 86
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
E + D+ VVV++G +IP ++ A G N HASLLP WRGAAPI
Sbjct: 87 -----QSWPIETSHCLDYDLGVVVSFGHLIPVHLIQAFPKGMINVHASLLPLWRGAAPII 141
Query: 124 RAIMAGDNETGIAIMKMD-KHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AIM D +TG++IMK++ H D G + R++ I S+I L ++L+ L A +V+ +
Sbjct: 142 YAIMNKDAQTGVSIMKIEPHHFDIGAILAQREMAIKSDILMPELHEKLAHLGADLLVDTV 201
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFC--RSAENVHNHIRALSPFPGAWLEMM 240
+ L+Q Q +YA KI+ V++ + + +
Sbjct: 202 NNLQQRLANARLQDNKNSSYAPKITNKIAEVSWAALNAEDIYTRYRALYGFKNLTTSFHG 261
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGA-VRIMRLQRAGGRVLDIG 295
+ ++L + Q + KPG + + I C+ + V +++L+ G + +
Sbjct: 262 KQIQLIELRLPKKQDERVQLKPGCLSYQRPLKSLLIGCANNSQVEVLQLRVEGRKCMSAQ 321
Query: 296 DFLLGC 301
DF G
Sbjct: 322 DFNNGF 327
>gi|148229111|ref|NP_001085894.1| aldehyde dehydrogenase family 1 member L1 [Xenopus laevis]
gi|82201051|sp|Q6GNL7|AL1L1_XENLA RecName: Full=Aldehyde dehydrogenase family 1 member L1; AltName:
Full=Cytosolic 10-formyltetrahydrofolate dehydrogenase;
Short=10-FTHFDH; Short=FDH
gi|49256014|gb|AAH73490.1| MGC81015 protein [Xenopus laevis]
Length = 902
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 66/313 (21%), Positives = 121/313 (38%), Gaps = 24/313 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F + L+ H +V V+T P + + A++ +P
Sbjct: 1 MKIAVIGQSLFGREVYRELLKEGHQVVGVFTIPDKNG-------KADPLGADAEKDGIPV 53
Query: 63 LVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ + E++ + A++ V+ IP +++ K G H S+LPR
Sbjct: 54 FKFPRWRVKGQAIPEVVEKYKALEAELNVLPFCSQFIPMEVIDCPKHGSIIYHPSILPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPI-SSNINTAGLQQELSVLCA 175
RGA+ I +M GD G + D LDTG + R+ + + + L
Sbjct: 114 RGASAINWTLMQGDKIGGFTVFWADDGLDTGDILLQRQCEVLPDDTVNTIYNRFLFPEGV 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MVEA+ + + N P Q G TY K ++N+ + AE++HN IR PGA
Sbjct: 174 KGMVEAVRLIAEGNAPRIKQPTEGATYDPMQKKENAKINWDQPAEDIHNFIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLLESQLVEGEGKPGEV---------INPNFTIACSQG-AVRIMRLQ 285
W + +G+P E+ + + G + + +Q
Sbjct: 234 WTVVDDQQLTFFGSSFTRNGPAPDGQPLEIPGASRPALVTKTGLVLFGNDGERLTVKNIQ 293
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 294 FEDGKMIPASQYF 306
>gi|11968144|ref|NP_071992.1| aldehyde dehydrogenase family 1 member L1 [Rattus norvegicus]
gi|1346044|sp|P28037|AL1L1_RAT RecName: Full=Aldehyde dehydrogenase family 1 member L1; AltName:
Full=Cytosolic 10-formyltetrahydrofolate dehydrogenase;
Short=10-FTHFDH; Short=FDH; AltName: Full=FBP-CI
gi|908915|gb|AAA70429.1| 10-formyltetrahydrofolate dehydrogenase [Rattus norvegicus]
Length = 902
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 70/316 (22%), Positives = 122/316 (38%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++
Sbjct: 1 MKIAVIGQSLFGQEVYCQLRKEGHEVVGVFTIPDKDG-------KADPLGLEAEKDGRAV 53
Query: 63 LVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ ++ + A++ V+ IP ++NA + G H SLLPR
Sbjct: 54 FKFPRWRARGQALPEVVAKYQALGAELNVLPFCSQFIPMEVINAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFTIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGTAPRCPQSEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L E+ + G +PG V + ++ + + +Q
Sbjct: 234 WTEACGQKLTFFNSTLNTSGLSTQGEALPIPGAHRPGVVTKAGLILFGNEHRMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ F G
Sbjct: 294 LEDGKMMPASQFFKGS 309
>gi|47215577|emb|CAG10748.1| unnamed protein product [Tetraodon nigroviridis]
Length = 921
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 72/313 (23%), Positives = 124/313 (39%), Gaps = 24/313 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ +G S F + L H+IV V+T P + + +A++ +P
Sbjct: 1 MRIAVIGQSLFGQEVYKELRKDGHTIVGVFTIPDKDG-------KADPLATQAEKDGVPV 53
Query: 63 LVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ + +Q+ A++ V+ IP ++N K G H SLLPR
Sbjct: 54 FKFPRWRVKGQAIPEVVDQYTRTGAELNVLPFCSQFIPMEVINHPKHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G + D LDTGP+ R+ + N + +
Sbjct: 114 RGASAINWTLIHGDKKGGFTVFWADDGLDTGPILLQRECDVEPNDTVNTIYKRFLFPEGV 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
VEA+ + + N P Q G TY K ++++ +SAE +HN IR PGA
Sbjct: 174 KGTVEAVKLIAEGNAPKITQPAEGATYECIQKKDNAKIDWNQSAEALHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLLESQLVEGEGKPGEV---------INPNFTIACSQG-AVRIMRLQ 285
W E+ L G+P E+ + + G ++ + LQ
Sbjct: 234 WAEVDGQKVTFYGSSLVDNGAAARGQPLEIPGASRPAMVTKSGLVLFGNDGKSLLVKNLQ 293
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 294 FEDGKMIAAAQYF 306
>gi|312960856|ref|ZP_07775361.1| Bifunctional polymyxin resistance protein [Pseudomonas fluorescens
WH6]
gi|311284514|gb|EFQ63090.1| Bifunctional polymyxin resistance protein [Pseudomonas fluorescens
WH6]
Length = 663
Score = 97.3 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 69/291 (23%), Positives = 132/291 (45%), Gaps = 13/291 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V + A ++AL+ S + I +V+T P +V + +
Sbjct: 1 MSSKAVVFAYHDIGCAGIEALLGSGYEIAAVFTHADDPKENN----FYGSVAQLCARNGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E+ N D Y ++ + +L + G +N H SLLP++RG
Sbjct: 57 PVHAPEDANHPLWVERVAKLNPDFIFSFYYRNLLSEPLLATARKGAFNLHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G+ ETG+ + +M K D G + +KV I + L +L A+ +
Sbjct: 117 APANWVLVNGETETGVTLHRMVKRADAGAILAQQKVAIELSDTGLTLHAKLREAAANLLR 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+A+ +L Q L + Q E TY + + + ++++ + A + N +R P+PGA+
Sbjct: 177 DALPQLSQGKLTETAQDETQATYFGRRTAADGKLDWKQPAHTLFNLVRAVTQPYPGAFCA 236
Query: 239 MMIGNKHERIKLLESQLVEGE--GKPGEVINPN-FTIACSQGAVRIMRLQR 286
+ ++ + ++++V+G PG V++ N IAC + ++ I QR
Sbjct: 237 VGEH----KLIVWQAEVVQGNEGLAPGRVVSVNPLRIACGEDSLVIKFGQR 283
>gi|296474619|gb|DAA16734.1| 10-formyltetrahydrofolate dehydrogenase [Bos taurus]
Length = 902
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 71/313 (22%), Positives = 125/313 (39%), Gaps = 24/313 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCRLREEGHEVVGVFTVPDKDG-------KADPLGLQAEQDGVPV 53
Query: 63 LVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ + Q+ + A++ V+ IP +++A + G H SLLPR
Sbjct: 54 FKFPRWRAKGRALPDVVAQYQALGAELNVLPFCSQFIPMEVISAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFTIFWADDGLDTGDLLLQKECEVLPDDTVSSLYNRFLFPEGV 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K R+++ + AE +HN IR PGA
Sbjct: 174 KGMVQAVKLIAEGKAPRLPQPEEGATYEGIQRKETARIDWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLLESQLVEGEGK---------PGEVINPNFTIACSQG-AVRIMRLQ 285
W E L + +E EG+ PG + + + G + + +Q
Sbjct: 234 WTEACGQKLTFFNSTLSTAGLEPEGEDLPIPGAHRPGVITKAGLILFGNDGRMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFL 298
G+++ F
Sbjct: 294 LEDGKMIPAAHFF 306
>gi|126339778|ref|XP_001374348.1| PREDICTED: similar to Aldehyde dehydrogenase 1 family, member L2
[Monodelphis domestica]
Length = 933
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 78/310 (25%), Positives = 124/310 (40%), Gaps = 23/310 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ +P
Sbjct: 32 KLKLALIGQSLFGQEVYSHLQKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGIP 84
Query: 62 ALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ QE + + S A++ V+ IP +++ K G H S+LPR
Sbjct: 85 VFKFPRWRVKGKTIQEVIDAYRSVGAELNVLPFCTQFIPMDVIDCPKHGSIIYHPSILPR 144
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G +I D LDTGP+ R+ + N L
Sbjct: 145 HRGASAINWTLILGDKKAGFSIFWADDGLDTGPILLQRECDVKPNDTVDALYNRFLFPEG 204
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K ++++ + AE +HN IR PG
Sbjct: 205 IKAMVEAVQLIADGKAPRIPQTEEGATYEGIQKKENAKISWDQPAEALHNWIRGHDKVPG 264
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E ++ G KPG V + + G + + +Q
Sbjct: 265 AWTEIDKQVITLYGSSLLDGSVPHGEPLIITGAEKPGLVTKKGLVLFGNDGKMLVVRNIQ 324
Query: 286 RAGGRVLDIG 295
GR++
Sbjct: 325 FEDGRMIPAS 334
>gi|3560541|gb|AAC35000.1| 10-formyltetrahydrofolate dehydrogenase [Homo sapiens]
Length = 902
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 68/316 (21%), Positives = 128/316 (40%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
++ + ++ + A++ V+ + IP I++A + G H SLLPR
Sbjct: 54 FKYSRWRAKAQALPDVVAKYQALGAELNVLPSCSQFIPMEIISAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G +I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
+V+A+ + + P PQ + G TY K ++N+ + AE +HN IR PGA
Sbjct: 174 KGVVQAVRLIAEGKAPRLPQPKEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L ++ + G +PG V + + + + +Q
Sbjct: 234 WTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ +F G
Sbjct: 294 LEDGKMILASNFFKGA 309
>gi|332241676|ref|XP_003270004.1| PREDICTED: probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2
[Nomascus leucogenys]
Length = 923
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 80/313 (25%), Positives = 124/313 (39%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSHLRKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
P K + + S A++ V+ IP I+++ K G H S+LPR
Sbjct: 75 VFKPPKWRVKGKTIKEVAEAYRSVGAELNVLPFCTQFIPMDIIDSPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVEPNDTVDALYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K +++ +SAE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPRIPQPEEGATYEGIQKKENAEISWDQSAEVLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E ++G KPG V + + G A+ + LQ
Sbjct: 255 AWTEINGQMVTFYGSTLLNSSVPPGEPLEIKGAKKPGLVTKNGLVLFGNDGKALMVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 315 FEDGKMIPASQYF 327
>gi|227112828|ref|ZP_03826484.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 677
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 67/320 (20%), Positives = 131/320 (40%), Gaps = 24/320 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + L+AL + + I +V+T P G ++V K A E +P
Sbjct: 1 MKAIVFAYHDIGCVGLEALKLAGYEIQAVFTHSDAP----GENHFYASVAKAAAEMDVPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ DV Y ++ IL G +N H SLLPR+RG AP
Sbjct: 57 FAPEDVNHPLWVNRIRELAPDVIFSFYYRTLLSDDILQLPSFGAFNLHGSLLPRYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ +TG+ + KM D G + V I L + A + +
Sbjct: 117 VNWVLVNGETQTGVTLHKMVSRADAGDIVAQSVVAIDEEDTALTLHGKCRTAAAALLAQQ 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + + L+PQ E+ +Y + + + +++ +SA ++N IR P+PGA+ +
Sbjct: 177 LPLIRSREITLTPQDESRASYFGRRTAADGLIDWQKSACEINNLIRAVTEPYPGAFTFLG 236
Query: 241 IGN-KHERIKLLESQLVEGEG--------KPGEVINPN-FTIACSQGAVRIMRLQRAGGR 290
R ++++ V+ +PG +I+ + ++C + A+ I+ Q
Sbjct: 237 ERKVIIWRARVVKVNRVKSNDVRANGVKQEPGAIISTSPLVVSCGEDALEIVSGQSE--- 293
Query: 291 VLDIGDFLLGCPVII--GCI 308
G ++ G + G +
Sbjct: 294 ---AGLYMSGSRLAAEMGMV 310
>gi|194390700|dbj|BAG62109.1| unnamed protein product [Homo sapiens]
Length = 923
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 79/313 (25%), Positives = 123/313 (39%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSHLRKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
K + + S A++ V+ IP I+++ K G H S+LPR
Sbjct: 75 VFKLPKWRVKGKTIKEVAEAYRSVGAELNVLPFCTQFIPMDIIDSPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVEPNDTVDALYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K +++ +SAE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPRIPQPEEGATYEGIQKKENAEISWDQSAEVLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E ++G KPG V + + G A+ + LQ
Sbjct: 255 AWTEINGQMVTFYGSTLLNSSVPPGEPLEIKGAKKPGLVTKNGLVLFGNDGKALTVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 315 FEDGKMIPASQYF 327
>gi|238814322|ref|NP_001029345.2| aldehyde dehydrogenase family 1 member L2, mitochondrial precursor
[Homo sapiens]
gi|166198355|sp|Q3SY69|AL1L2_HUMAN RecName: Full=Aldehyde dehydrogenase family 1 member L2,
mitochondrial; AltName: Full=Mitochondrial
10-formyltetrahydrofolate dehydrogenase; Short=mtFDH
Length = 923
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 79/313 (25%), Positives = 123/313 (39%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSHLRKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
K + + S A++ V+ IP I+++ K G H S+LPR
Sbjct: 75 VFKLPKWRVKGKTIKEVAEAYRSVGAELNVLPFCTQFIPMDIIDSPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVEPNDTVDALYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K +++ +SAE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPRIPQPEEGATYEGIQKKENAEISWDQSAEVLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E ++G KPG V + + G A+ + LQ
Sbjct: 255 AWTEINGQMVTFYGSTLLNSSVPPGEPLEIKGAKKPGLVTKNGLVLFGNDGKALTVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 315 FEDGKMIPASQYF 327
>gi|119618163|gb|EAW97757.1| hCG1811684 [Homo sapiens]
Length = 839
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 79/313 (25%), Positives = 123/313 (39%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSHLRKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
K + + S A++ V+ IP I+++ K G H S+LPR
Sbjct: 75 VFKLPKWRVKGKTIKEVAEAYRSVGAELNVLPFCTQFIPMDIIDSPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVEPNDTVDALYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K +++ +SAE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPRIPQPEEGATYEGIQKKENAEISWDQSAEVLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E ++G KPG V + + G A+ + LQ
Sbjct: 255 AWTEINGQMVTFYGSTLLNSSVPPGEPLEIKGAKKPGLVTKNGLVLFGNDGKALTVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 315 FEDGKMIPASQYF 327
>gi|21755168|dbj|BAC04634.1| unnamed protein product [Homo sapiens]
Length = 752
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 79/313 (25%), Positives = 123/313 (39%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSHLRKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
K + + S A++ V+ IP I+++ K G H S+LPR
Sbjct: 75 VFKLPKWRVKGKTIKEVAEAYRSVGAELNVLPFCTQFIPMDIIDSPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVEPNDTVDALYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K +++ +SAE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPRIPQPEEGATYEGIQKKENAEISWDQSAEVLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E ++G KPG V + + G A+ + LQ
Sbjct: 255 AWTEINGQMVTFYGSTLLNSSVPPGEPLEIKGAKKPGLVTKNGLVLFGNDGKALTVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 315 FEDGKMIPASQYF 327
>gi|74355155|gb|AAI03935.1| Aldehyde dehydrogenase 1 family, member L2 [Homo sapiens]
gi|190692027|gb|ACE87788.1| aldehyde dehydrogenase 1 family, member L2 protein [synthetic
construct]
gi|254071355|gb|ACT64437.1| aldehyde dehydrogenase 1 family, member L2 protein [synthetic
construct]
Length = 923
Score = 96.9 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 79/313 (25%), Positives = 123/313 (39%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSHLRKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
K + + S A++ V+ IP I+++ K G H S+LPR
Sbjct: 75 VFKLPKWRVKGKTIKEVAEAYRSVGAELNVLPFCTQFIPMDIIDSPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVEPNDTVDALYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K +++ +SAE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPRIPQPEEGATYEGIQKKENAEISWDQSAEVLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E ++G KPG V + + G A+ + LQ
Sbjct: 255 AWTEINGQMVTFYGSTLLNSSVPPGEPLEIKGAKKPGLVTKNGLVLFGNDGKALTVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 315 FEDGKMIPASQYF 327
>gi|301759347|ref|XP_002915513.1| PREDICTED: probable 10-formyltetrahydrofolate dehydrogenase
ALDH1L2-like [Ailuropoda melanoleuca]
Length = 923
Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 81/313 (25%), Positives = 126/313 (40%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYHHLCKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + S A++ V+ IP I+++ K G H S+LPR
Sbjct: 75 VFKFPRWRVKGKTIKEVAEAYKSVGAELNVLPFCTQFIPMDIIDSPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R I N L
Sbjct: 135 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDIEPNDTVDALYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K +++ +SAE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPRIPQPEEGATYEGIQKKENAEISWDQSAEVLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGN-KHERIKLLESQL-------VEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ LL+S + ++G KPG V + + G A+ + LQ
Sbjct: 255 AWTEINGQMVTFYGSSLLKSSVPPGEPLEIKGAKKPGLVTKNGLVLFGNDGKALMVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
GR++ +
Sbjct: 315 FEDGRMIPASQYF 327
>gi|281337877|gb|EFB13461.1| hypothetical protein PANDA_003522 [Ailuropoda melanoleuca]
Length = 891
Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 81/313 (25%), Positives = 126/313 (40%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 7 KLKLALIGQSLFGQEVYHHLCKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 59
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + S A++ V+ IP I+++ K G H S+LPR
Sbjct: 60 VFKFPRWRVKGKTIKEVAEAYKSVGAELNVLPFCTQFIPMDIIDSPKHGSIIYHPSILPR 119
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R I N L
Sbjct: 120 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDIEPNDTVDALYNRFLFPEG 179
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K +++ +SAE +HN IR PG
Sbjct: 180 IKAMVEAVQLIADGKAPRIPQPEEGATYEGIQKKENAEISWDQSAEVLHNWIRGHDKVPG 239
Query: 235 AWLEMMIGN-KHERIKLLESQL-------VEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ LL+S + ++G KPG V + + G A+ + LQ
Sbjct: 240 AWTEINGQMVTFYGSSLLKSSVPPGEPLEIKGAKKPGLVTKNGLVLFGNDGKALMVRNLQ 299
Query: 286 RAGGRVLDIGDFL 298
GR++ +
Sbjct: 300 FEDGRMIPASQYF 312
>gi|77459068|ref|YP_348574.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas fluorescens Pf0-1]
gi|123604592|sp|Q3KCC1|ARNA_PSEPF RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|77383071|gb|ABA74584.1| putative formyl transferase [Pseudomonas fluorescens Pf0-1]
Length = 668
Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 67/291 (23%), Positives = 130/291 (44%), Gaps = 13/291 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V + A +QAL+ S + I +V+T P + ++V + +
Sbjct: 1 MSAKTVVFAYHDIGCAGIQALLDSGYDIAAVFTHAHDPKEN----TFYASVAQLCANNGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
E+ + D Y ++ + +L K G +N H SLLPR+RG
Sbjct: 57 AVHAPEDANHPLWIERIAKLDPDYIFSFYYRNLLSEPLLALAKKGAFNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G+ ETG+ + +M K D G + ++V I + L +L + +
Sbjct: 117 APANWVLVNGETETGVTLHRMVKRADAGAIVAQQRVAIERSDTALSLHGKLRTAASDLLR 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+A+ + Q + +PQ E+ T + + + ++ + + AE + N +R P+PGA+
Sbjct: 177 DALPAMLQGRITETPQDESKATVFGRRTPADGKLVWAQPAEKLFNLVRAVTQPYPGAFCA 236
Query: 239 MMIGNKHERIKLLESQLVEGEG--KPGEVIN-PNFTIACSQGAVRIMRLQR 286
+ ++ + +++V+G PG VI+ IAC + ++ I QR
Sbjct: 237 VGEH----KLIVWSAEVVKGNEGQAPGRVISVDPLRIACGEDSLVINAGQR 283
>gi|215403254|ref|ZP_03415435.1| fmu protein (sun protein) [Mycobacterium tuberculosis 02_1987]
gi|289745158|ref|ZP_06504536.1| sun protein [Mycobacterium tuberculosis 02_1987]
gi|289685686|gb|EFD53174.1| sun protein [Mycobacterium tuberculosis 02_1987]
Length = 768
Score = 96.9 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 89/267 (33%), Positives = 135/267 (50%), Gaps = 4/267 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+A+L+ L+ S H +++V T+P +GRRG K S V ++A E +P
Sbjct: 1 MRLVFAGTPEPALASLRRLIESPSHDVIAVLTRPDAASGRRG-KPQPSPVAREAAERGIP 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P++ E+ LS + VVAYG ++ +L G+ N H SLLP WRGAA
Sbjct: 60 VLRPSRPNSAEFVAELSDLAPECCAVVAYGALLGGPLLAVPPHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG +++ LD+GP+ + I L + L+V A +
Sbjct: 120 PVQAAIAAGDTITGATTFQIEPSLDSGPIYGVVTEVIQPTDTAGDLLKRLAVSGAALLST 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+D + L PQ +G++ A KI+ RV + A V IRA++P PGAW +
Sbjct: 180 TLDGIADQRLTPRPQPADGVSVAPKITVANARVRWDLPAAVVERRIRAVTPNPGAWTLIG 239
Query: 241 IGNKHERIKLLESQLVEGE-GKPGEVI 266
L++ + PG +
Sbjct: 240 DLRVKLGPVHLDAAHRPSKPLPPGGIH 266
>gi|311771613|ref|NP_001185701.1| aldehyde dehydrogenase 1 family, member L1 [Danio rerio]
gi|196174733|gb|ACG75896.1| 10-formyltetrahydrofolate dehydrogenase [Danio rerio]
Length = 903
Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 70/314 (22%), Positives = 127/314 (40%), Gaps = 25/314 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F + L + H IV V+T P + + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYKELKNEGHMIVGVFTIPDKDG-------KVDPLAIEAEKDGVPV 53
Query: 63 LVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ E +Q+ + A++ V+ IP +++ K G H SLLPR
Sbjct: 54 FKFPRWRLKGKAITEVVDQYKAVGAELNVLPFCSQFIPMEVIDHPKHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGA+ I ++ GD + G + D LDTGP+ R+ + N N + +
Sbjct: 114 RGASAINWTLIHGDKKGGFTVFWADDGLDTGPILLQRECDVEPNDNVNSIYKRFLFPEGV 173
Query: 177 AMVEAMDK-LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
+ + + P Q E G TY K +++++ + AE +HN IR PGA
Sbjct: 174 KGMVEAVRLIATGKAPRIKQPEEGATYECIQKKENSKIDWNQPAEAIHNWIRGNDRVPGA 233
Query: 236 WLEMMIGNK-HERIKLLESQLVEGEGKPGEV---------INPNFTIACSQG-AVRIMRL 284
W E+ + LLE+ G+P E+ + + G + + L
Sbjct: 234 WAEIDGKSVSFYGSTLLENDHFSSNGQPLEIPGASRAALVTKNGLVLFGNDGKMLLVKNL 293
Query: 285 QRAGGRVLDIGDFL 298
Q G+++ +
Sbjct: 294 QFEDGKMIPGSQYF 307
>gi|222054647|ref|YP_002537009.1| formyl transferase domain protein [Geobacter sp. FRC-32]
gi|221563936|gb|ACM19908.1| formyl transferase domain protein [Geobacter sp. FRC-32]
Length = 311
Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 59/285 (20%), Positives = 114/285 (40%), Gaps = 10/285 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
++V + L+ I ++T P + +V + A++ +P +
Sbjct: 13 KIVVCAYHNVGYRCIAELIRQGADIRMIFTHEDSPTE----EIWFESVRQLAEKHYIPYM 68
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
E D + Y +I IL+ G N H S LPR+RG P+
Sbjct: 69 TSDINLPENAALLQEIAPDFILSFYYRNMIKPEILSLPGCGALNLHGSYLPRYRGRVPVN 128
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
A++ G+ ETG + M + D G + KV I + + +++ + +
Sbjct: 129 WAVINGETETGATLHYMVEKPDAGDIVDQEKVTIEFTDTSFDVFNKVTDAAVTVIARSWP 188
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIG 242
L P Y + R+++ +SA ++N IR P+PGA++ +
Sbjct: 189 LLVAGTAGRIPMDLKAGNYCGGRKPADGRIDWSKSAVQIYNLIRGVTHPYPGAFMFL--- 245
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQR 286
+++ + ++ VEG G+PG+V++ + G + I +LQ
Sbjct: 246 -NGKKVIIWQAWPVEGSGEPGKVVSAEPLMVGTGNGLLAIKKLQL 289
>gi|156718104|ref|NP_001096557.1| 10-formyltetrahydrofolate dehydrogenase [Bos taurus]
gi|154425745|gb|AAI51474.1| ALDH1L1 protein [Bos taurus]
Length = 902
Score = 96.5 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 72/313 (23%), Positives = 126/313 (40%), Gaps = 24/313 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCRLREEGHEVVGVFTVPDKDG-------KADPLGLQAEQDGVPV 53
Query: 63 LVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ + Q+L+ A++ V+ IP +++A + G H SLLPR
Sbjct: 54 FKFPRWRAKGRALPDVVAQYLALGAELNVLPFCSQFIPMEVISAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFTIFWADDGLDTGDLLLQKECEVLPDDTVSSLYNRFLFPEGV 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K R+++ + AE +HN IR PGA
Sbjct: 174 KGMVQAVKLIAEGKAPRLPQPEEGATYEGIQRKETARIDWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLLESQLVEGEGK---------PGEVINPNFTIACSQG-AVRIMRLQ 285
W E L + +E EG+ PG + + + G + + +Q
Sbjct: 234 WTEACGQKLTFFNSTLSTAGLEPEGEDLPIPGAHRPGVITKAGLILFGNDGRMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFL 298
G+++ F
Sbjct: 294 LEDGKMIPAAHFF 306
>gi|183598828|ref|ZP_02960321.1| hypothetical protein PROSTU_02260 [Providencia stuartii ATCC 25827]
gi|188021036|gb|EDU59076.1| hypothetical protein PROSTU_02260 [Providencia stuartii ATCC 25827]
Length = 660
Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 66/307 (21%), Positives = 130/307 (42%), Gaps = 19/307 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + L+AL + I +V+T P S+V + + + LP
Sbjct: 1 MKAIVFAYHDIGCVGLKALKKAGFDIQAVFTHTDDPNENH----FFSSVARVSADMELPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ DV Y ++ + +L G +N H SLLP++RG AP
Sbjct: 57 YAPENVNHPLWIERIRELKPDVIFSFYYRDMLSEELLALAPKGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G+ ETG+ + KM D G + KV I+ L ++ + +
Sbjct: 117 INWALLNGEKETGVTLHKMVTKADAGDIVAQEKVTITDTDTALTLHAKVREAAEVLLDKT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ +E + Q E+ +Y + + + +++ RSA+ + IR P+PGA+ +
Sbjct: 177 LPLIEAGSYKTVAQDESQASYFGRRTAQDGLIDWNRSAKEIDCLIRAVTEPYPGAFTYLG 236
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +++++ + G V++ + IAC +GA+ ++ Q G D G +
Sbjct: 237 ERKMV----IWRARVLDDNQGKRAGTVLSSDPLRIACGEGAIEVVSGQ--G----DSGLY 286
Query: 298 LLGCPVI 304
+ G +
Sbjct: 287 MQGNRLA 293
>gi|114646666|ref|XP_001160213.1| PREDICTED: aldehyde dehydrogenase family 1 member L2, mitochondrial
isoform 1 [Pan troglodytes]
Length = 923
Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 79/313 (25%), Positives = 123/313 (39%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSHLRKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
K + + S A++ V+ IP I+++ K G H S+LPR
Sbjct: 75 VFKLPKWRVKGKTIKEVAEAYRSVGAELNVLPFCTQFIPMDIIDSPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVEPNDTVDALYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K +++ +SAE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPRIPQPEEGATYEGIQKKENAEISWDQSAEVLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E ++G KPG V + + G A+ + LQ
Sbjct: 255 AWTEINGQMVTFYGSTLLNSSVPPGEPLEIKGAKKPGLVTKNGLVLFGNDGKALMVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 315 FEDGKMIPASQYF 327
>gi|114646668|ref|XP_509329.2| PREDICTED: aldehyde dehydrogenase 1 family, member L2 isoform 2
[Pan troglodytes]
Length = 839
Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 79/313 (25%), Positives = 123/313 (39%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSHLRKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
K + + S A++ V+ IP I+++ K G H S+LPR
Sbjct: 75 VFKLPKWRVKGKTIKEVAEAYRSVGAELNVLPFCTQFIPMDIIDSPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVEPNDTVDALYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K +++ +SAE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPRIPQPEEGATYEGIQKKENAEISWDQSAEVLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E ++G KPG V + + G A+ + LQ
Sbjct: 255 AWTEINGQMVTFYGSTLLNSSVPPGEPLEIKGAKKPGLVTKNGLVLFGNDGKALMVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 315 FEDGKMIPASQYF 327
>gi|218890219|ref|YP_002439083.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa LESB58]
gi|226723719|sp|B7VBN2|ARNA_PSEA8 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|218770442|emb|CAW26207.1| putative transformylase [Pseudomonas aeruginosa LESB58]
Length = 662
Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 62/291 (21%), Positives = 128/291 (43%), Gaps = 13/291 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT + V + ++AL+++ + I +V+T P + ++V + E +
Sbjct: 1 MTSKAVVFAYHDIGCTGIEALLNAGYEIAAVFTHADDPREN----TFYASVARLCAERGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E+ D Y ++ +L G YN H SLLPR+RG
Sbjct: 57 PLHAPEDVNHPLWLERIRQLRPDFLFSFYYRRLLGAELLACAARGAYNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G+ +TG+ + +M + D GP+ + V I L +L +
Sbjct: 117 APANWVLVNGETQTGVTLHRMIERADAGPILAQQAVAIDPEDTALSLHGKLRKAAGALLR 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+++ L LP Q E+ ++ + + + +++ R A +++ +R P+PGA+ +
Sbjct: 177 DSLPLLALGVLPEVEQDESQASHFGRRTPADGLLDWHRPARQLYDLVRAVTQPYPGAFCQ 236
Query: 239 MMIGNKHERIKLLESQLVEGEG--KPGEVIN-PNFTIACSQGAVRIMRLQR 286
+ +++ + +++V G +PG V++ IAC + ++ + QR
Sbjct: 237 VGE----QKLIVWSAEVVAGNHGREPGSVLSCDPLRIACGEDSLVLRFGQR 283
>gi|254236474|ref|ZP_04929797.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126168405|gb|EAZ53916.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
Length = 662
Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 62/291 (21%), Positives = 128/291 (43%), Gaps = 13/291 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT + V + ++AL+++ + I +V+T P + ++V + E +
Sbjct: 1 MTSKAVVFAYHDIGCTGIEALLNAGYEIAAVFTHADDPREN----TFYASVARLCAERGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E+ D Y ++ +L G YN H SLLPR+RG
Sbjct: 57 PLHAPEDVNHPLWLERIRQLRPDFLFSFYYRRLLGAELLACAARGAYNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G+ +TG+ + +M + D GP+ + V I L +L +
Sbjct: 117 APANWVLVNGETQTGVTLHRMIERADAGPILAQQAVAIDPEDTALSLHGKLRKAAGALLR 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+++ L LP Q E+ ++ + + + +++ R A +++ +R P+PGA+ +
Sbjct: 177 DSLPLLALGVLPEVEQDESQASHFGRRTPADGLLDWHRPARQLYDLVRAVTQPYPGAFCQ 236
Query: 239 MMIGNKHERIKLLESQLVEGEG--KPGEVIN-PNFTIACSQGAVRIMRLQR 286
+ +++ + +++V G +PG V++ IAC + ++ + QR
Sbjct: 237 VGE----QKLIVWSAEVVAGNHGREPGSVLSCDPLRIACGEDSLVLRFGQR 283
>gi|116051552|ref|YP_789611.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|296387943|ref|ZP_06877418.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa PAb1]
gi|313108902|ref|ZP_07794883.1| putative transformylase [Pseudomonas aeruginosa 39016]
gi|122260693|sp|Q02R25|ARNA_PSEAB RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|115586773|gb|ABJ12788.1| putative transformylase [Pseudomonas aeruginosa UCBPP-PA14]
gi|310881385|gb|EFQ39979.1| putative transformylase [Pseudomonas aeruginosa 39016]
Length = 662
Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 62/291 (21%), Positives = 128/291 (43%), Gaps = 13/291 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT + V + ++AL+++ + I +V+T P + ++V + E +
Sbjct: 1 MTSKAVVFAYHDIGCTGIEALLNAGYEIAAVFTHADDPREN----TFYASVARLCAERGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E+ D Y ++ +L G YN H SLLPR+RG
Sbjct: 57 PLHAPEDVNHPLWLERIRQLRPDFLFSFYYRRLLGAELLACAARGAYNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G+ +TG+ + +M + D GP+ + V I L +L +
Sbjct: 117 APANWVLVNGETQTGVTLHRMIERADAGPILAQQAVAIDPEDTALSLHGKLRKAAGALLR 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+++ L LP Q E+ ++ + + + +++ R A +++ +R P+PGA+ +
Sbjct: 177 DSLPLLALGVLPEVEQDESQASHFGRRTPADGLLDWHRPARQLYDLVRAVTQPYPGAFCQ 236
Query: 239 MMIGNKHERIKLLESQLVEGEG--KPGEVIN-PNFTIACSQGAVRIMRLQR 286
+ +++ + +++V G +PG V++ IAC + ++ + QR
Sbjct: 237 VGE----QKLIVWSAEVVAGNHGREPGSVLSCDPLRIACGEDSLVLRFGQR 283
>gi|15598750|ref|NP_252244.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa PAO1]
gi|107103066|ref|ZP_01366984.1| hypothetical protein PaerPA_01004135 [Pseudomonas aeruginosa PACS2]
gi|254242256|ref|ZP_04935578.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|81622194|sp|Q9HY63|ARNA_PSEAE RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|9949706|gb|AAG06942.1|AE004776_5 ArnA [Pseudomonas aeruginosa PAO1]
gi|126195634|gb|EAZ59697.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
Length = 662
Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 62/291 (21%), Positives = 128/291 (43%), Gaps = 13/291 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT + V + ++AL+++ + I +V+T P + ++V + E +
Sbjct: 1 MTSKAVVFAYHDIGCTGIEALLNAGYEIAAVFTHADDPREN----TFYASVARLCAERGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E+ D Y ++ +L G YN H SLLPR+RG
Sbjct: 57 PLHAPEDVNHPLWLERIRQLRPDFLFSFYYRRLLGAELLACAARGAYNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G+ +TG+ + +M + D GP+ + V I L +L +
Sbjct: 117 APANWVLVNGETQTGVTLHRMIERADAGPILAQQAVAIDPEDTALSLHGKLRKAAGALLR 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+++ L LP Q E+ ++ + + + +++ R A +++ +R P+PGA+ +
Sbjct: 177 DSLPLLALGVLPEVEQDESQASHFGRRTPADGLLDWHRPARQLYDLVRAVTQPYPGAFCQ 236
Query: 239 MMIGNKHERIKLLESQLVEGEG--KPGEVIN-PNFTIACSQGAVRIMRLQR 286
+ +++ + +++V G +PG V++ IAC + ++ + QR
Sbjct: 237 VGE----QKLIVWSAEVVAGNHGREPGSVLSCDPLRIACGEDSLVLRFGQR 283
>gi|261341975|ref|ZP_05969833.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Enterobacter cancerogenus ATCC 35316]
gi|288315885|gb|EFC54823.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Enterobacter cancerogenus ATCC 35316]
Length = 660
Score = 96.5 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 57/288 (19%), Positives = 123/288 (42%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + AL+ + + I +++T P G + +V + A E +P
Sbjct: 1 MKAVVFAYHDMGCTGTLALLEAGYDIAAIFTHPDAV----GENTFFGSVARIAAERGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ ++ Y ++ IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDDVNHPLWVDRIRKIAPEMIFSFYYRSLLCDEILSVATNGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M D G + ++V I + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVNRADAGAIVAQQRVAIGPDDTALELHHKLCAAAQTLLRDT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ L + Q E+ + + + + R+++ + A +HN +R P+PGA+
Sbjct: 177 LPTLLNGSFSEIAQDESKASCFGRRTPEDGRLDWHKPARQLHNLVRAVTDPWPGAYSFAG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQ 285
+ + + +S++ + +PG V++ + I+C + A+ I+ Q
Sbjct: 237 VS----KFIVWKSRVRDDIPAARPGTVVSASPLVISCGEQALEIVTGQ 280
>gi|326912187|ref|XP_003202435.1| PREDICTED: probable 10-formyltetrahydrofolate dehydrogenase
ALDH1L2-like [Meleagris gallopavo]
Length = 943
Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 69/310 (22%), Positives = 114/310 (36%), Gaps = 23/310 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 43 KLKLALIGQSIFGQEVYNKLRKEGHKVVGVFTVPDKNG-------QADPLALAAEKDGTP 95
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + S A++ V+ IP +++ K G H S+LPR
Sbjct: 96 VFKFPRWRTKGKPIQEVIAAYKSVGAELNVLPFCTQFIPMDVIDCPKHGSIIYHPSILPR 155
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
RGA+ I ++ GD + G I D LDTGP+ R+ + N L
Sbjct: 156 HRGASAINWTLIQGDKKAGFTIFWADDGLDTGPILLQRECDVGQNDTVDDLYNRFLFPEG 215
Query: 176 HAMVEAMDK-LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
+ + P PQ + G TY K +++ + A +HN IR PG
Sbjct: 216 VKAMVEAVHLIADGKAPRIPQPKEGATYEGIQKKENAEISWDQPAAALHNWIRGHDKVPG 275
Query: 235 AWLEMMIG-NKHERIKLLESQL-------VEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW + LL++ + + G +PG V I + G V + LQ
Sbjct: 276 AWATINDQVVTFYGSSLLDASVPAGQELAIRGASRPGLVTKNGLVIFGNDGKMVLVRNLQ 335
Query: 286 RAGGRVLDIG 295
G+++
Sbjct: 336 FQDGKMIPAS 345
>gi|73969967|ref|XP_531763.2| PREDICTED: similar to aldehyde dehydrogenase 1 family, member L2
[Canis familiaris]
Length = 923
Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 79/313 (25%), Positives = 127/313 (40%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSHLCKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + S A++ V+ IP ++++ K G H S+LPR
Sbjct: 75 VFKFPRWRVKGKTIKEVAEAYKSVGAELNVLPFCTQFIPMDVIDSPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G+++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLIMGDKKAGLSVFWADDGLDTGPILLQRSCDVEPNDTVDALYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K +++ +SAE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPRIPQPEEGATYEGIQKKENAEISWDQSAEVLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGN-KHERIKLLESQL-------VEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ LL+S + ++G KPG V + + G A+ + LQ
Sbjct: 255 AWTEINGQMVTFYGSSLLKSSVPPGEPLEIKGAKKPGLVTKNGLVLFGNDGKALMVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
GR++ +
Sbjct: 315 FEDGRMIPASQYF 327
>gi|255522390|ref|ZP_05389627.1| methionyl-tRNA formyltransferase [Listeria monocytogenes FSL
J1-175]
Length = 165
Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 65/157 (41%), Positives = 92/157 (58%), Gaps = 4/157 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT +++FMGT EF+V L L +S++ +V+V TQP RP G R V K A E ++
Sbjct: 1 MT-KIIFMGTPEFSVPVLTQL-ASTYDVVAVVTQPDRPVG-RKRVLTPPPVKKAALELAI 57
Query: 61 PALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P K E E+ ++ AD+ V AYG ++P +L + K G N HASLLP +RG
Sbjct: 58 PVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGG 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
AP+ A++ G ETG+ IM M + LD G + RK+P
Sbjct: 118 APVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIP 154
>gi|323706343|ref|ZP_08117908.1| formyl transferase domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323534305|gb|EGB24091.1| formyl transferase domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 294
Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 63/297 (21%), Positives = 116/297 (39%), Gaps = 17/297 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ F+GT EF+ L+ L+ + +IVSV T+ + + +L
Sbjct: 1 MRISFIGTVEFSKRILEKLIELNCNIVSVLTKEKSKYNSDFVNLS-----ELCIRNNLEY 55
Query: 63 -LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E + S D+ +I + +LN +G H +LLP+ RG P
Sbjct: 56 KYFNNINEFETIKYIKSKEPDIIFCFGLSQLIGKELLNIPPMGVLGYHPALLPQNRGRHP 115
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A+ G ETG M++ D+G + K+ I+ + + L ++++ + +
Sbjct: 116 IIWALALGLKETGSTFFFMNEDADSGDILSQEKIEINYSDDAKSLYEKITSIALKQVENF 175
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ LE Q Y K S+ + +++ S+ ++N +R P+PGA+
Sbjct: 176 IPLLENGTYKTIKQDNVISNYWRKRSEKDGEIDWRMSSYTIYNLVRALTRPYPGAYFFYK 235
Query: 241 IGNKHERIKLLESQLVE-GEGKPGEVINPN---FTIACSQGAVRIM-----RLQRAG 288
K+ E + +PG+VI N I + I + G
Sbjct: 236 NKKVRV-WKVNEVRTNRYDNLEPGKVIKNNNGVLLIKAGDNCIEITDCDLGEIIMEG 291
>gi|304413469|ref|ZP_07394942.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Candidatus Regiella insecticola LSR1]
gi|304284312|gb|EFL92705.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Candidatus Regiella insecticola LSR1]
Length = 689
Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 68/288 (23%), Positives = 140/288 (48%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + A L L ++ + I +V+T P ++V KA E LP
Sbjct: 8 MKTIVFAYHNIGHAALTELATAGYDIQAVFTHLDDPQENN----FFNSVAAKATEMGLPV 63
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + D+ Y ++ IL+ G +N H SLLPR+RG AP
Sbjct: 64 YAPENVNHPLWVDRIKQLQPDIIFSFYYRNLLSPEILSLAPKGGFNLHGSLLPRYRGCAP 123
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K +D G +A RKV I L ++++ + +
Sbjct: 124 VNWVLVNGESETGVTLHQMLKKVDQGAIAGQRKVMIDPEDTAFTLHEKITQAAQRLLRDL 183
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ +++Q ++ L PQ E +Y + + + ++++ +SA V+N +R P+PGA+ +
Sbjct: 184 LPQIKQGSITLVPQNEEEASYFGRRTAADGKIDWQQSAVTVNNLVRAVTKPYPGAFSYLG 243
Query: 241 IGNKHERIKLLESQL--VEGEGKPGEVINPN-FTIACSQGAVRIMRLQ 285
+++ + +S+ ++ + +PG ++ + IAC +GA+ ++ Q
Sbjct: 244 E----QKLIIWQSRPLDIKHDEQPGTLLKTDPLIIACGKGALEVIAAQ 287
>gi|293348543|ref|XP_001079663.2| PREDICTED: aldehyde dehydrogenase 1L2-like [Rattus norvegicus]
Length = 887
Score = 96.1 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L+ H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSHLLKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + S A++ V+ IP I+++ + G H SLLPR
Sbjct: 75 VFKFPRWRVKGKTIKEVAEAYQSVGAELNVLPFCTQFIPMDIIDSPEHGSIIYHPSLLPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
G+ + ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HPGSTALFWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVKPNDTVDSLYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P +PQ E G TY K + + + AE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPRTPQPEEGATYEGIQKKENAEIPWDQPAEVLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E + G KPG V + + G A+ + LQ
Sbjct: 255 AWAEIDGQMVTFYGSSLLTSSVPAGEPLDIRGAKKPGLVTKNGLVLFGNDGKALMVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 315 FEDGKMIPASQYF 327
>gi|118082834|ref|XP_416314.2| PREDICTED: similar to Aldehyde dehydrogenase 1 family, member L2
[Gallus gallus]
Length = 922
Score = 96.1 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 69/310 (22%), Positives = 114/310 (36%), Gaps = 23/310 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSIFGQEVYNKLRKEGHKVVGVFTVPDKNG-------QADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + S A++ V+ IP +++ K G H S+LPR
Sbjct: 75 VFKFPRWRAKGKPIQEVIAAYKSVGAELNVLPFCTQFIPMDVIDCPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
RGA+ I ++ GD + G I D LDTGP+ R+ + N L
Sbjct: 135 HRGASAINWTLIQGDKKAGFTIFWADDGLDTGPILLQRECDVGQNDTVDDLYNRFLFPEG 194
Query: 176 HAMVEAMDK-LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
+ + P PQ + G TY K +++ + A +HN IR PG
Sbjct: 195 VKAMVEAVHLIADGKAPRIPQPKEGATYEGIQKKENAEISWDQPAAALHNWIRGHDKVPG 254
Query: 235 AWLEMMIG-NKHERIKLLESQL-------VEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW + LL++ + + G +PG V I + G V + LQ
Sbjct: 255 AWATIDDQVVTFYGSSLLDASVPAGQELAIRGASRPGLVTKNGLVIFGNDGKMVLVRNLQ 314
Query: 286 RAGGRVLDIG 295
G+++
Sbjct: 315 FQDGKMIPAS 324
>gi|215445592|ref|ZP_03432344.1| methionyl-tRNA formyltransferase [Mycobacterium tuberculosis T85]
gi|289757512|ref|ZP_06516890.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
T85]
gi|289713076|gb|EFD77088.1| methionyl-tRNA formyltransferase fmt [Mycobacterium tuberculosis
T85]
Length = 293
Score = 95.7 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 86/237 (36%), Positives = 127/237 (53%), Gaps = 3/237 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF GT E A+A+L+ L+ S H +++V T+P +GRRG K S V ++A E +P
Sbjct: 1 MRLVFAGTPEPALASLRRLIESPSHDVIAVLTRPDAASGRRG-KPQPSPVAREAAERGIP 59
Query: 62 ALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L P++ E+ LS + VVAYG ++ +L G+ N H SLLP WRGAA
Sbjct: 60 VLRPSRPNSAEFVAELSDLAPECCAVVAYGALLGGPLLAVPPHGWVNLHFSLLPAWRGAA 119
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q AI AGD TG +++ LD+GP+ + I L + L+V A +
Sbjct: 120 PVQAAIAAGDTITGATTFQIEPSLDSGPIYGVVTEVIQPTDTAGDLLKRLAVSGAALLST 179
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+D + L PQ +G++ A KI+ RV + A V IRA++P PGAW
Sbjct: 180 TLDGIADQRLTPRPQPADGVSVAPKITVANARVRWDLPAAVVERRIRAVTPNPGAWT 236
>gi|91084907|ref|XP_969916.1| PREDICTED: similar to aldehyde dehydrogenase [Tribolium castaneum]
gi|270008989|gb|EFA05437.1| hypothetical protein TcasGA2_TC015614 [Tribolium castaneum]
Length = 915
Score = 95.7 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 77/309 (24%), Positives = 126/309 (40%), Gaps = 29/309 (9%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+LR+ +G S FAV L+ L H IV V+T P + G R + K A E +P
Sbjct: 13 SLRIAIIGQSPFAVDVLKRLRQHGHVIVGVFTIPDK--GTR-----EDPLAKIAHECDIP 65
Query: 62 ALVPTKLGQEEYE------QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + S NAD+ V+ IP ++N +L H SLLPR
Sbjct: 66 LFKVKAWRKSGTPLPEVLANYRSVNADLNVLPYCSQFIPMEVINYPRLKTICYHPSLLPR 125
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I +++GD + G +I D LDTGP+ + + + L
Sbjct: 126 HRGASSINWTLISGDKKAGFSIFWADDGLDTGPILLQEECDVYEDDTVDSLYNRFLYPAG 185
Query: 175 AHAMVEAMDKLEQNNLPLSPQIEN-GITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A+ A+D + P PQ E ++++ ++ +H+ IR + P
Sbjct: 186 VTALARAVDLVADGTAPREPQSEKGATYDPMLNKPELCQIDWGKTGPELHDFIRGMDSVP 245
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKP------------GEVINPNFTIACSQGA-VR 280
GA + + +K+ + L S + +G GKP G + + S G V
Sbjct: 246 GASCRVKVNDKYHEVALFGSSVWKG-GKPQGLDVGIEGGPNGTIHEDGLILTGSDGTMVN 304
Query: 281 IMRLQRAGG 289
+ R++ G
Sbjct: 305 VKRVKIEGR 313
>gi|73536304|pdb|2BW0|A Chain A, Crystal Structure Of The Hydrolase Domain Of Human 10-
Formyltetrahydrofolate 2 Dehydrogenase
gi|93279113|pdb|2CFI|A Chain A, The Hydrolase Domain Of Human 10-Fthfd In Complex With 6-
Formyltetrahydropterin
Length = 329
Score = 95.7 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 69/314 (21%), Positives = 127/314 (40%), Gaps = 24/314 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 22 SMKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVP 74
Query: 62 ALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ + ++ + A++ V+ IP I++A + G H SLLPR
Sbjct: 75 VFKYSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G +I D LDTG + ++ + + + L
Sbjct: 135 HRGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PG
Sbjct: 195 IKGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRL 284
AW E L ++ + G +PG V + + + + +
Sbjct: 255 AWTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNI 314
Query: 285 QRAGGRVLDIGDFL 298
Q G+++ +F
Sbjct: 315 QLEDGKMILASNFF 328
>gi|229590502|ref|YP_002872621.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas fluorescens SBW25]
gi|259563493|sp|C3KAD2|ARNA_PSEFS RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|229362368|emb|CAY49270.1| putative formyl transferase [Pseudomonas fluorescens SBW25]
Length = 663
Score = 95.7 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 69/291 (23%), Positives = 133/291 (45%), Gaps = 13/291 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V + A ++AL+++ + I +V+T P +V + +
Sbjct: 1 MSSKAVVFAYHDIGCAGIEALLNTGYDIAAVFTHADDPKENN----FYGSVAQLCARNGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E+ N D Y ++ + +L + G +N H SLLP++RG
Sbjct: 57 PVHAPEDANHPLWIERIAKLNPDYLFSFYYRNLLSEPLLATARKGAFNLHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G+ ETG+ + +M K D G + +KV I + L +L ++ +
Sbjct: 117 APANWVLVNGETETGVTLHRMVKRADAGAILAQQKVIIERSDTGLTLHAKLRDAASNLLR 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+A+ +L Q L + Q E+ TY + + + ++ + + AE + N +R P+PGA+
Sbjct: 177 DALPQLAQGKLAETAQDESQATYFGRRTAADGKLEWKKPAEELFNLVRAVTQPYPGAFCA 236
Query: 239 MMIGNKHERIKLLESQLVEGE--GKPGEVINPN-FTIACSQGAVRIMRLQR 286
+ ++ + ++ +V+G PG VI+ N IAC + ++ I QR
Sbjct: 237 VGEH----KLVVWQADVVKGNEGLAPGRVISVNPLRIACGEDSLVIKFGQR 283
>gi|149637847|ref|XP_001505782.1| PREDICTED: similar to Aldehyde dehydrogenase 1 family, member L2
[Ornithorhynchus anatinus]
Length = 1010
Score = 95.7 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 77/310 (24%), Positives = 121/310 (39%), Gaps = 23/310 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H IV V+T P + + A++ P
Sbjct: 109 KLKLALIGQSLFGQEVYNNLRKEGHKIVGVFTVPDKDG-------KADPLALAAEKDGTP 161
Query: 62 ALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ Q+ E + + A++ V+ IP +++ K G H S+LPR
Sbjct: 162 VFKFPRWRVKGKAIQDVLEAYSAVGAELNVLPFCTQFIPMDVIDYPKHGSIIYHPSILPR 221
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R+ + N L
Sbjct: 222 HRGASAINWTLIHGDKKAGFSVFWADDGLDTGPILLQRECAVEPNDTVDVLYNRFLFPEG 281
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K + + + AE +HN IR PG
Sbjct: 282 IKAMVEAVQLIANGKAPQIPQSEEGATYEGIQKKENAEIAWDQPAEVLHNWIRGHDKVPG 341
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW ++ L E +EG KPG V + + G + + LQ
Sbjct: 342 AWTKIDGQMVTFYGSSLLDSTVPSGEPLEIEGAKKPGLVTKNGLVLFGNDGKMLMVRNLQ 401
Query: 286 RAGGRVLDIG 295
G+++
Sbjct: 402 FEDGKMIPAS 411
>gi|283436218|ref|NP_705771.2| aldehyde dehydrogenase family 1 member L2, mitochondrial [Mus
musculus]
Length = 923
Score = 95.7 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 78/313 (24%), Positives = 123/313 (39%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L+ H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSQLLKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + S A++ V+ IP ++++ K G H SLLPR
Sbjct: 75 VFKFPRWRLKGKTIKEVAEAYQSVGAELNVLPFCTQFIPMDVIDSPKHGSIIYHPSLLPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVKPNDTVDSLYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P +PQ E G TY K V++ + AE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPRTPQPEEGATYEGIQKKENAEVSWDQPAEGLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E + G KPG V + + G A+ + LQ
Sbjct: 255 AWAEINGQMVTFYGSSLLTSSVPSGEPLDIRGAKKPGLVTKNGLVLFGNDGKALMVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 315 FEDGKMIPASQYF 327
>gi|148689442|gb|EDL21389.1| aldehyde dehydrogenase 1 family, member L2, isoform CRA_b [Mus
musculus]
Length = 924
Score = 95.7 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 78/313 (24%), Positives = 123/313 (39%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L+ H +V V+T P + + A++ P
Sbjct: 23 KLKLALIGQSLFGQEVYSQLLKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 75
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + S A++ V+ IP ++++ K G H SLLPR
Sbjct: 76 VFKFPRWRLKGKTIKEVAEAYQSVGAELNVLPFCTQFIPMDVIDSPKHGSIIYHPSLLPR 135
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 136 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVKPNDTVDSLYNRFLFPEG 195
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P +PQ E G TY K V++ + AE +HN IR PG
Sbjct: 196 IKAMVEAVQLIADGKAPRTPQPEEGATYEGIQKKENAEVSWDQPAEGLHNWIRGHDKVPG 255
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E + G KPG V + + G A+ + LQ
Sbjct: 256 AWAEINGQMVTFYGSSLLTSSVPSGEPLDIRGAKKPGLVTKNGLVLFGNDGKALMVRNLQ 315
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 316 FEDGKMIPASQYF 328
>gi|148689441|gb|EDL21388.1| aldehyde dehydrogenase 1 family, member L2, isoform CRA_a [Mus
musculus]
Length = 802
Score = 95.7 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 78/313 (24%), Positives = 123/313 (39%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L+ H +V V+T P + + A++ P
Sbjct: 44 KLKLALIGQSLFGQEVYSQLLKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 96
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + S A++ V+ IP ++++ K G H SLLPR
Sbjct: 97 VFKFPRWRLKGKTIKEVAEAYQSVGAELNVLPFCTQFIPMDVIDSPKHGSIIYHPSLLPR 156
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 157 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVKPNDTVDSLYNRFLFPEG 216
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P +PQ E G TY K V++ + AE +HN IR PG
Sbjct: 217 IKAMVEAVQLIADGKAPRTPQPEEGATYEGIQKKENAEVSWDQPAEGLHNWIRGHDKVPG 276
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E + G KPG V + + G A+ + LQ
Sbjct: 277 AWAEINGQMVTFYGSSLLTSSVPSGEPLDIRGAKKPGLVTKNGLVLFGNDGKALMVRNLQ 336
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 337 FEDGKMIPASQYF 349
>gi|81900790|sp|Q8K009|AL1L2_MOUSE RecName: Full=Aldehyde dehydrogenase family 1 member L2,
mitochondrial; AltName: Full=Mitochondrial
10-formyltetrahydrofolate dehydrogenase; Short=mtFDH
gi|21961590|gb|AAH34531.1| Aldehyde dehydrogenase 1 family, member L2 [Mus musculus]
gi|148689443|gb|EDL21390.1| aldehyde dehydrogenase 1 family, member L2, isoform CRA_c [Mus
musculus]
Length = 923
Score = 95.7 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 78/313 (24%), Positives = 123/313 (39%), Gaps = 23/313 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L+ H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSQLLKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + S A++ V+ IP ++++ K G H SLLPR
Sbjct: 75 VFKFPRWRLKGKTIKEVAEAYQSVGAELNVLPFCTQFIPMDVIDSPKHGSIIYHPSLLPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVKPNDTVDSLYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P +PQ E G TY K V++ + AE +HN IR PG
Sbjct: 195 IKAMVEAVQLIADGKAPRTPQPEEGATYEGIQKKENAEVSWDQPAEGLHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW E+ L E + G KPG V + + G A+ + LQ
Sbjct: 255 AWAEINGQMVTFYGSSLLTSSVPSGEPLDIRGAKKPGLVTKNGLVLFGNDGKALMVRNLQ 314
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 315 FEDGKMIPASQYF 327
>gi|281347860|gb|EFB23444.1| hypothetical protein PANDA_012229 [Ailuropoda melanoleuca]
Length = 650
Score = 95.7 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 71/321 (22%), Positives = 124/321 (38%), Gaps = 24/321 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 3 AMKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVP 55
Query: 62 ALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + ++ + A++ V+ IP +++A + G H SLLPR
Sbjct: 56 VFKFPRWRVKGQALPDVVAKYQALGAELNVLPFCSQFIPMEVISAPRHGSIIYHPSLLPR 115
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G I D LDTG + ++ I + + L
Sbjct: 116 HRGASAINWTLIHGDKKGGFTIFWADDGLDTGDLLLQKECEILPDDTVSTLYNRFLFPEG 175
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PG
Sbjct: 176 IKGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWEQPAEAIHNWIRGNDKVPG 235
Query: 235 AWLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRL 284
AW E L E + G +PG V + + + + +
Sbjct: 236 AWTEACGQKLTFFNSTLNTAGLVPEGEDLPILGAHRPGVVTKVGLILFGNDDRMLLVKNI 295
Query: 285 QRAGGRVLDIGDFLLGCPVII 305
Q G+++ F G +
Sbjct: 296 QLEDGKMIPASHFFKGADINA 316
>gi|299472047|emb|CBN80130.1| methionyl-tRNA formyltransferase [Ectocarpus siliculosus]
Length = 451
Score = 95.7 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 78/331 (23%), Positives = 125/331 (37%), Gaps = 33/331 (9%)
Query: 4 RVVFMGTSEFAVATLQALVSS-------SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ 56
+VVF+GT E A ++L L+ + +V + PP G R SAV A
Sbjct: 104 KVVFLGTPEIAASSLGLLLEASRQGKGGGFDVVRAVSNPPARTG-RKKVLQPSAVQALAD 162
Query: 57 EFSLPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + P EE+ L D+ + AYG +P+R L+ K G N H SLLP
Sbjct: 163 SEGITVMTPGTARDEEFLAGLEELQPDLCITAAYGQFLPRRFLDIPKFGTLNVHPSLLPL 222
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+RGA+P+QR + AGD ETG+ + +D GPV + + L QEL +
Sbjct: 223 YRGASPVQRCLEAGDTETGVTVAFTVLKMDAGPVVRQTVRELDGSEKAPELLQELFLEGT 282
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEK---ISKGETRVNFCRSAENVHNHIRALSPF 232
++E + + N + SPQ + A K + + A P
Sbjct: 283 KQLIECLPGVWDNTVEKSPQDDAAAVKAAKISVDEARCCFKTTSATTIHNKVRAFAGWPG 342
Query: 233 PGAWLEMMIGNKHERIKLLE------------------SQLVEGEGKPGEVI--NPNFTI 272
A + ++ + E +V+ +
Sbjct: 343 TWAMFSWGKEGTDSEARKVKLITTAVADPAAAGDDADGGTIEETAVAERQVVMKGDALEL 402
Query: 273 ACSQGA-VRIMRLQRAGGRVLDIGDFLLGCP 302
CS G+ +R++ LQ +V+ F G
Sbjct: 403 TCSDGSVLRVLELQPLNKKVMSAKAFANGLR 433
>gi|330901596|gb|EGH33015.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 249
Score = 95.3 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 88/236 (37%), Positives = 135/236 (57%), Gaps = 9/236 (3%)
Query: 80 NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMK 139
D+ VVVAYGL++PQ +L+ +LG N HASLLPRWRGAAPIQRA+ AGD E+G+ +M+
Sbjct: 17 QPDLMVVVAYGLILPQVVLDIPRLGCINSHASLLPRWRGAAPIQRAVQAGDAESGVTVMR 76
Query: 140 MDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENG 199
M+ LDTGP+ I++ L L+ L A+++A+ L +L Q ++
Sbjct: 77 MEAGLDTGPMLLKAVTTITAQDTGGTLHDRLAELGPPAVLQAIAGLADGSLVGEVQDDSL 136
Query: 200 ITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGE 259
YA K++K E R+++ R A+ + +RA +P+P + E +K+L + L EG+
Sbjct: 137 ANYAHKLNKDEARLDWTRPADELERLVRAFNPWPICHSTL----NEETLKVLAADLAEGQ 192
Query: 260 GKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP--VIIGCIVG 310
G PG ++ +AC Q A+R+ RLQ GG+ L+ D IG ++G
Sbjct: 193 GAPGTILGASKDGLIVACGQNALRLTRLQLPGGKPLNFTDLFNSRREKFAIGTVLG 248
>gi|301775436|ref|XP_002923141.1| PREDICTED: 10-formyltetrahydrofolate dehydrogenase-like, partial
[Ailuropoda melanoleuca]
Length = 629
Score = 95.3 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 71/320 (22%), Positives = 124/320 (38%), Gaps = 24/320 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ + ++ + A++ V+ IP +++A + G H SLLPR
Sbjct: 54 FKFPRWRVKGQALPDVVAKYQALGAELNVLPFCSQFIPMEVISAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G I D LDTG + ++ I + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFTIFWADDGLDTGDLLLQKECEILPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWEQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L E + G +PG V + + + + +Q
Sbjct: 234 WTEACGQKLTFFNSTLNTAGLVPEGEDLPILGAHRPGVVTKVGLILFGNDDRMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGCPVII 305
G+++ F G +
Sbjct: 294 LEDGKMIPASHFFKGADINA 313
>gi|170759182|ref|YP_001788030.1| methionyl-tRNA formyltransferase [Clostridium botulinum A3 str.
Loch Maree]
gi|169406171|gb|ACA54582.1| methionyl-tRNA formyltransferase [Clostridium botulinum A3 str.
Loch Maree]
Length = 316
Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 68/315 (21%), Positives = 136/315 (43%), Gaps = 24/315 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ ++F+G ++A L+ +++ +I V + + + + A+E ++
Sbjct: 1 MNILFLGDGKWAQIALEKVITIKDINISGVVLR---------YNTPDTVLKNIAEEHNID 51
Query: 62 ALVPTKLGQEEYEQ-FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
V + EE+ + S N D+ V +++ +I +++ +TK GF N HA LP +RG
Sbjct: 52 VYVENNVNNEEFIKLIKSKNIDLGVSMSFDQIIKKQLRESTKEGFINCHAGKLPNYRGRN 111
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
+ A++ + E GI +D +DTG + +P+ + L + C +++
Sbjct: 112 ILNWALINDEKEIGITAHYIDDGIDTGDIISQYIIPVEETDDYFTLLCKSINKCPEVLID 171
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ K+++N + PQ TY G+ +++ S+ +HN IRAL +
Sbjct: 172 AILKIKKNKVEKIPQSHINGTYFSYRRNGDELIDWNWSSRRIHNFIRALVEPAPGAQTYL 231
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAG--GRVLDIG 295
G+K K E+ + PGE+I + A++I + G +V+
Sbjct: 232 NGDKICIWKSEETNFPDYISTPGEIIRKDKDGIIVKTGDNAIKIKLISYDGDSKKVIP-- 289
Query: 296 DFLLGCPVIIGCIVG 310
+ IG G
Sbjct: 290 ------KIPIGNRFG 298
>gi|29141079|ref|NP_804421.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|29136705|gb|AAO68270.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
Length = 660
Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 64/288 (22%), Positives = 131/288 (45%), Gaps = 13/288 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T A + +V + A +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNLAEN----TFFGSVSRLAAGLGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G++ETG+ + +M K D G + ++V I+ + L +L +
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSI 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+P PQ E+ TY + + +++ + VHN +R +P+PGA+
Sbjct: 177 LPTMKCGNIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF---- 232
Query: 241 IGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
N ++ + S++ + +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 233 SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEIITGQ 280
>gi|332530874|ref|ZP_08406799.1| methionyl-tRNA formyltransferase [Hylemonella gracilis ATCC 19624]
gi|332039671|gb|EGI76072.1| methionyl-tRNA formyltransferase [Hylemonella gracilis ATCC 19624]
Length = 319
Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 86/323 (26%), Positives = 139/323 (43%), Gaps = 26/323 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSS----SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
+R+ +G +F A L A ++ ++V V+ +P +P G K A+ + AQ
Sbjct: 1 MRIALIGQQDFGKAVLHAFLARGASQGDTVVGVFCKPEQP----GEK--PDALREAAQAA 54
Query: 59 SLPALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP L EE + +AD+ V+ PQ + K G H SLLPR R
Sbjct: 55 GLPVFQFASLKSEEAHAALRALDADLGVMAYVLQFAPQSFVKLPKHGTIQYHPSLLPRHR 114
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNIN-TAGLQQELSVLCAH 176
G + I I G ETG+ I + LD GPV ++ I ++ +L L
Sbjct: 115 GPSSINWPIALGATETGLTIFRPTDGLDEGPVILQKRCAIEADDTLGEVYFNKLFPLGVQ 174
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
A++EA D + Q E+ +Y E R+++ + + V+N IRA +P PGAW
Sbjct: 175 ALLEAADLVVAGRHTEHVQDESQASYEGWFKSEEARIHWAQHVDQVYNLIRACNPAPGAW 234
Query: 237 LEMMIGN-------KHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRL-- 284
EM + ++ K + GKPG+++ + IA G + ++R+
Sbjct: 235 FEMSDAHGRPMKVSVYDCRKHVTRTFAAVRGKPGDIVEIATQSLFIAAHGGEIEVLRVKA 294
Query: 285 QRAG--GRVLDIGDFLLGCPVII 305
Q AG G+ +D F +
Sbjct: 295 QIAGASGKKVDAAAFAREHGLRA 317
>gi|198438465|ref|XP_002130073.1| PREDICTED: similar to Probable 10-formyltetrahydrofolate
dehydrogenase ALDH1L2 (Aldehyde dehydrogenase family 1
member L2) [Ciona intestinalis]
Length = 921
Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 81/312 (25%), Positives = 129/312 (41%), Gaps = 23/312 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++ +G S F T L + H +V V+T P G K AV A + +P
Sbjct: 23 KMKIAVIGQSMFGADTYNILRKNGHKVVGVFTIPDV-----GGKQDPLAVA--ASQDGVP 75
Query: 62 ALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ E EQ+ S A++ V+ IP +++ K G H S+LP+
Sbjct: 76 VFKFKRWRLKGKPIPEVVEQYASCGAELNVMPFCSQFIPMNVIDHPKNGSIIYHPSILPK 135
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I +M+GD + G I D LDTGP+ R+ + +N +
Sbjct: 136 HRGASAINWTLMSGDKKAGFTIFWADDGLDTGPILLQRECDVKANDTVDDIYNRFLYPEG 195
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AM EA+ + P Q E G +Y + +N+ + A N+HN IR PG
Sbjct: 196 IKAMGEAVQLIADGKAPKIVQSEEGASYEGIMKHSTAEINWDQPAINLHNFIRGNDKVPG 255
Query: 235 AWLEMMIGN------KHERIKL--LESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW + R KL E+ V+G +PG V + S G + + +Q
Sbjct: 256 AWTVINDEKVTLFGSTVHRSKLPTGEAVQVKGMAQPGIVHKNGLLLYGSDGKKINVKNIQ 315
Query: 286 RAGGRVLDIGDF 297
+ G+++ F
Sbjct: 316 YSDGKMVAASKF 327
>gi|237797315|ref|ZP_04585776.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331020165|gb|EGI00222.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 651
Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 78/294 (26%), Positives = 129/294 (43%), Gaps = 14/294 (4%)
Query: 14 AVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL-VPTKLGQEE 72
A LQAL+ + + I +VYT P + +V + +
Sbjct: 2 GCAGLQALLDAGYEIAAVYTHADDP----DENTFFGSVARLCARHGITVHAPEDPNHPLW 57
Query: 73 YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNE 132
E+ D Y ++ + +L K G +N H SLLP +RG AP ++ G+ E
Sbjct: 58 VERVAKLAPDFIFSFYYRQLLGEPLLACAKKGAFNLHGSLLPHYRGRAPANWVLVNGETE 117
Query: 133 TGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPL 192
TG+ + +M K D GPV ++VPIS+ L +L + E + L Q+ L
Sbjct: 118 TGVTLHQMVKRADAGPVFAQQRVPISATDTALTLHGKLREAATDLLSETLPLLAQDRLSG 177
Query: 193 SPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIGNKHERIKLL 251
+PQ E+ T K + + +++ A +++ IR P+PGA+ +G+ I
Sbjct: 178 TPQDESRATCFGKRTPADGLIDWSLPAARLYDLIRAVTQPYPGAFC--AVGDNKLIIWAA 235
Query: 252 ESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVI 304
+ +L PG VI+ + IAC +G++ I QR G D G +L G +
Sbjct: 236 DLELRNDGEAPGTVISHDPLRIACGEGSLVIRAGQR-G----DAGLYLSGAQLA 284
>gi|297285191|ref|XP_001108084.2| PREDICTED: 10-formyltetrahydrofolate dehydrogenase-like isoform 1
[Macaca mulatta]
Length = 904
Score = 95.3 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 69/318 (21%), Positives = 127/318 (39%), Gaps = 26/318 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYGHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
++ + ++ + A++ V+ IP I+NA + G H SLLPR
Sbjct: 54 FKFSRWRAKGQALPEVVAKYQALGAELNVLPFCSQFIPMEIINAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G +I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K ++++ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKIDWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKL-----------LESQLVEGEGKPGEVINPNFTIACSQG-AVRIMR 283
W E + ++ + G +PG V + + + +
Sbjct: 234 WTEACEPLQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKN 293
Query: 284 LQRAGGRVLDIGDFLLGC 301
+Q G+++ +F G
Sbjct: 294 IQLEDGKMILASNFFKGA 311
>gi|331697776|ref|YP_004334015.1| methionyl-tRNA formyltransferase [Pseudonocardia dioxanivorans
CB1190]
gi|326952465|gb|AEA26162.1| Methionyl-tRNA formyltransferase [Pseudonocardia dioxanivorans
CB1190]
Length = 322
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 75/310 (24%), Positives = 134/310 (43%), Gaps = 20/310 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + T++A++ + H + + T P + K +V + A + ++P
Sbjct: 1 MRVVAFGYMTWGRRTIEAVLEAGHEVPLIVTHPDGDSAY--EKIFNESVAELAADRAIPV 58
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
LV + +E + AD+ VV + +P + + +LG N H +LLP + G AP
Sbjct: 59 LVRNRAHDEEVRTAIAAAEADIMVVSNWRTWLPPEVYSIPRLGTLNVHDALLPAYAGFAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ + E G+ MD D G + R P++ + L + V+A
Sbjct: 119 LNWALINDEPEVGVTAHMMDADFDAGDIVLQRSTPVTDDDTVVDLFDRTLAMFGPITVDA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMM 240
+D + +PQ +Y + S E R+++ +V N +RA P+P A+
Sbjct: 179 LDLIASGRRDFAPQDRRAASYFHRRSDEENRIDWTWPPRDVFNLVRAQVDPYPNAYC--- 235
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAG 288
ERI++L + L + G PG ++ +A A V I R++
Sbjct: 236 -YRGTERIRVLAASLTDDAIGGTPGRIVIRRGTGVVVAAGADARRGRNPGVLIHRVRLDD 294
Query: 289 GRVLDIGDFL 298
GR LD D+
Sbjct: 295 GRELDAVDYF 304
>gi|284006258|emb|CBA71494.1| bifunctional polymyxin resistance protein [Arsenophonus nasoniae]
Length = 653
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 13/273 (4%)
Query: 18 LQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL-VPTKLGQEEYEQF 76
L+AL + I +V+T P S+V + E LP E+
Sbjct: 3 LKALKKAGFEIQAVFTHTDDPKENH----FFSSVARLGAELGLPVFAPENVNHSLWIERI 58
Query: 77 LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIA 136
DV Y ++ Q +L G +N H SLLP++RG PI AI+ G+ ETG+
Sbjct: 59 EKMQPDVIFSFYYRHMLSQELLALAPKGAFNLHGSLLPKYRGRVPINWAILNGETETGVT 118
Query: 137 IMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQI 196
+ KM D G + +KV I + L +++ + + + ++ + +PQ
Sbjct: 119 LHKMIAKADAGDIIAQKKVAIDATDTALVLHEKIRQASEQLLADTLPLIKMGDYSATPQD 178
Query: 197 ENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIGNKHERIKLLESQL 255
E+ TY + + +++ +SA V+N IR P+PGA+ + ++ + +++
Sbjct: 179 ESQATYFGRRRAEDGLIDWSKSATEVNNLIRAVTEPYPGAFTYLAES----KMIVWRARV 234
Query: 256 VEGEGK--PGEVINPN-FTIACSQGAVRIMRLQ 285
+E PG +I+ IAC QG + I+ Q
Sbjct: 235 LEKSHDKLPGTIISTEPLQIACGQGVLEILTGQ 267
>gi|301617367|ref|XP_002938116.1| PREDICTED: probable 10-formyltetrahydrofolate dehydrogenase ALDH1L2
[Xenopus (Silurana) tropicalis]
Length = 922
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 79/310 (25%), Positives = 120/310 (38%), Gaps = 23/310 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+ +G S F L H IV V+T P + + A++ P
Sbjct: 22 KLRLALIGQSLFGQEVYNNLRKEGHKIVGVFTVPDKDG-------KADPLAVAAEKDGTP 74
Query: 62 ALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ E E + S AD+ V+ IP ++++ K G H S+LPR
Sbjct: 75 VFKFPRWRVKGKSIPEVVEAYKSVGADLNVLPYCTQFIPMDVIDSPKNGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLINGDKKAGFSVFWADDGLDTGPILLQRACDVEPNDTVDTLYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AM+EA+ + P Q E+G TY K ++ + SA+ +HN IR PG
Sbjct: 195 IKAMLEAVQLIADGKAPRIGQPEDGATYEGIQKKENAKICWDNSAQAIHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW + L + VEG KPG V + + G + I LQ
Sbjct: 255 AWTLINEQMVTLYGSSLLDGPVPTGQPVSVEGASKPGLVTKNGLVLFGNDGKMLTIRNLQ 314
Query: 286 RAGGRVLDIG 295
G+++
Sbjct: 315 FEDGKMIPAS 324
>gi|240169924|ref|ZP_04748583.1| putative formyltransferase [Mycobacterium kansasii ATCC 12478]
Length = 312
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 73/266 (27%), Positives = 124/266 (46%), Gaps = 7/266 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TLQAL+ H +V T P + + +V K A++ +P
Sbjct: 1 MRVVSFGFQTWGYKTLQALIELGHDVVLAVTHP--ASDQSYKAIWSDSVEKLARDHGIPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + E + DV VV ++ +P + N G N H SLLP++ G +P+
Sbjct: 59 HITERADPETIDVVKRAEPDVIVVNSWYSWMPPELYNLPPHGTLNLHDSLLPKFTGFSPV 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A+++G++E G+ + +MD DTG + +PI L L A+ EA+
Sbjct: 119 LWALISGESEFGLTVHRMDDGFDTGDILIQHSLPIGPTDTATELVVRGMGLIPGALREAL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D LE PQ + TY K ++ ++ +++ AE++ +RAL +
Sbjct: 179 DALESGTAVWRPQNKAERTYFHKRAERDSLIDWNWPAEDLERFVRAL---SDPYPRAFSY 235
Query: 243 NKHERIKLLESQLVEGE--GKPGEVI 266
+ ERI++LE+Q+ + G PG VI
Sbjct: 236 YRGERIEVLEAQVSQARYGGTPGRVI 261
>gi|159155439|gb|AAI54924.1| LOC100127737 protein [Xenopus (Silurana) tropicalis]
Length = 502
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 79/310 (25%), Positives = 120/310 (38%), Gaps = 23/310 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+ +G S F L H IV V+T P + + A++ P
Sbjct: 22 KLRLALIGQSLFGQEVYNNLRKEGHKIVGVFTVPDKDG-------KADPLAVAAEKDGTP 74
Query: 62 ALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ E E + S AD+ V+ IP ++++ K G H S+LPR
Sbjct: 75 VFKFPRWRVKGKSIPEVVEAYKSVGADLNVLPYCTQFIPMDVIDSPKNGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 HRGASAINWTLINGDKKAGFSVFWADDGLDTGPILLQRACDVEPNDTVDTLYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AM+EA+ + P Q E+G TY K ++ + SA+ +HN IR PG
Sbjct: 195 IKAMLEAVQLIADGKAPRIGQPEDGATYEGIQKKENAKICWDNSAQAIHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW + L + VEG KPG V + + G + I LQ
Sbjct: 255 AWTLINEQMVTLYGSSLLDGPVPTGQPVSVEGASKPGLVTKNGLVLFGNDGKMLTIRNLQ 314
Query: 286 RAGGRVLDIG 295
G+++
Sbjct: 315 FEDGKMIPAS 324
>gi|212711450|ref|ZP_03319578.1| hypothetical protein PROVALCAL_02523 [Providencia alcalifaciens DSM
30120]
gi|212685906|gb|EEB45434.1| hypothetical protein PROVALCAL_02523 [Providencia alcalifaciens DSM
30120]
Length = 661
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 66/307 (21%), Positives = 133/307 (43%), Gaps = 19/307 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + ++AL + I +V+T P S+V + + + LP
Sbjct: 1 MKAIVFAYHDIGCVGIKALEKAGFDIQAVFTHTDDPNENH----FYSSVARVSADMELPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ DV Y ++ + +L G +N H SLLP++RG AP
Sbjct: 57 FAPENVNHPLWIERIREMKPDVIFSFYYRDMLSEELLALAPKGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G++ETG+ + KM D G + KV I+ L ++ + +
Sbjct: 117 INWALLNGESETGVTLHKMVAKADAGDIVAQEKVAITDTDTALTLHAKVREAAEVLLDKT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ +E + + Q E+ +Y + S + ++++ RSA+ ++ IR P+PGA+ +
Sbjct: 177 LPLIEAGSYKTTAQDESQASYFGRRSADDGQIDWNRSAKEINCLIRAVTEPYPGAFTYLG 236
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
++ + +++++ G V++ + IAC QGA+ I+ Q G +
Sbjct: 237 AR----KMIIWRARVLDDNQGKAAGTVLSSDPLRIACGQGALEIVSGQSE------TGLY 286
Query: 298 LLGCPVI 304
+ G +
Sbjct: 287 MQGNRLA 293
>gi|330891043|gb|EGH23704.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. mori str.
301020]
Length = 649
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 74/296 (25%), Positives = 125/296 (42%), Gaps = 10/296 (3%)
Query: 18 LQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL-VPTKLGQEEYEQF 76
LQAL+ + + I +V+T+ P K+ V + +PA E+
Sbjct: 4 LQALLGAGYEIAAVFTRADDPKE----KTFFGPVAQLCARHGIPAHAPEDPNHPLWVERI 59
Query: 77 LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIA 136
D Y ++ +L K G N H SLLPR+RG AP ++ G++ETG+
Sbjct: 60 GKLAPDFIFSFYYRQLLGDPLLACAKKGALNLHGSLLPRYRGRAPANWVLVNGESETGVT 119
Query: 137 IMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQI 196
+ +M K D GP+ ++V ISS L +L A + E + L L +PQ
Sbjct: 120 LHQMVKRADAGPIVAQQRVSISSTDTALTLHGKLREAAAGLLSETLPLLALGQLSGTPQD 179
Query: 197 ENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIGNKHERIKLLESQL 255
E + + + + +++ A ++N IR P+PGA+ +G + ++
Sbjct: 180 ETLASCFGRRTPADGLIDWSLPATQLYNLIRAVTQPYPGAFC--AVGENKLIVWAASAEA 237
Query: 256 VEGEGKPGEVINPN-FTIACSQGAVRIMRLQR-AGGRVLDIGDFLLGCPVIIGCIV 309
PG VI+ + IAC +G++ I QR G L ++ G +
Sbjct: 238 GNNGEAPGTVISHDPLRIACGEGSLVINAGQRGDNGLYLSGVQLAREFGLVEGSQL 293
>gi|260774555|ref|ZP_05883468.1| methionyl-tRNA formyltransferase [Vibrio metschnikovii CIP 69.14]
gi|260610461|gb|EEX35667.1| methionyl-tRNA formyltransferase [Vibrio metschnikovii CIP 69.14]
Length = 261
Score = 95.0 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 87/264 (32%), Positives = 145/264 (54%), Gaps = 12/264 (4%)
Query: 54 KAQEFSLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
A E ++P P +E +Q L+ DV VVVAY L++P+ +L+ KLG N H S+
Sbjct: 1 MALEQNIPVYQPENFKSDEAKQTLADLNADVMVVVAYSLLLPKAVLDIPKLGCINVHGSI 60
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LPRWRGAAPIQR+I AGD+ETG+ IM+MD LDTG + + ++PI ++ +A + +L+
Sbjct: 61 LPRWRGAAPIQRSIWAGDSETGVTIMQMDVGLDTGDMLSIVRLPIEASDTSASMYDKLAE 120
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
L A+V +DKL L Q + YA+K+SK E ++++ + A + +RA +P+
Sbjct: 121 LGPQALVACLDKLALGQLSPEKQDDALANYAQKLSKEEAKIDWTQEAAFIERCVRAFNPW 180
Query: 233 PGAWLEMMIGNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRLQRA 287
P + ++ IK+ +S++ E PG +I +A +G + + ++Q
Sbjct: 181 PISHFDVADN----TIKVWQSRVDERESTHAPGTIIQADKSGIYVATGRGVLVLEQIQVP 236
Query: 288 GGRVLDIGDFLLGCP--VIIGCIV 309
G + + + D L +G +
Sbjct: 237 GKKAMPVQDILNARASWFAVGTQL 260
>gi|327395472|dbj|BAK12894.1| methionyl-tRNA formyltransferase Fmt [Pantoea ananatis AJ13355]
Length = 229
Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 73/211 (34%), Positives = 114/211 (54%), Gaps = 10/211 (4%)
Query: 105 FYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTA 164
N H SLLPRWRGAAPIQRA+ AGD+ETG+ IM+MD LDTG + PIS+ +A
Sbjct: 22 CINVHGSLLPRWRGAAPIQRALWAGDSETGVTIMQMDVGLDTGDMLLKLACPISAEDTSA 81
Query: 165 GLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHN 224
L +L+ L ++ + +L N Q E+ YAEK+SK E R+N+ AE +
Sbjct: 82 TLYDKLADLGPAGLMTTLSQLRDGNAQAVQQDESLANYAEKLSKEEARLNWTLPAEQLER 141
Query: 225 HIRALSPFPGAWLEMMIGNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACSQGAVR 280
IRA +P+P ++ + + +K+ ++ ++ +PGE+I IA + G +
Sbjct: 142 CIRAFNPWPISFFMV----NDQPVKVWQASVLPHVNKQPGEIIQADKHGIHIATADGVLN 197
Query: 281 IMRLQRAGGRVLDIGDFLLGCP--VIIGCIV 309
+++LQ AG + + D L G ++
Sbjct: 198 LLQLQPAGKKTMSAQDLLNSRREWFETGTLL 228
>gi|261344004|ref|ZP_05971649.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Providencia rustigianii DSM 4541]
gi|282568395|gb|EFB73930.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Providencia rustigianii DSM 4541]
Length = 661
Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 65/307 (21%), Positives = 128/307 (41%), Gaps = 19/307 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + ++AL + I +V+T P S+V + + + LP
Sbjct: 1 MKAIVFAYHDIGCVGIKALEKAGFDIQAVFTHTDDPNENH----FYSSVARVSADMELPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ DV Y ++ + +L G +N H SLLP++RG AP
Sbjct: 57 FAPENVNHPLWIERIREMKPDVIFSFYYRDMLSEELLALAPKGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G++ETG+ + KM D G + KV IS L ++ + +
Sbjct: 117 INWALLNGESETGVTLHKMVAKADAGDIVAQEKVAISDTDTALTLHAKVREAAEVLLDKT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ +E Q E+ +Y + + + ++++ RSA ++ IR P+PGA+ +
Sbjct: 177 LPLIEAGTYKAVAQDESQASYFGRRNADDGQIDWSRSATEINCLIRAVTEPYPGAFTYLG 236
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ +++++ G V++ + IAC +GA+ I+ Q G +
Sbjct: 237 ARKMV----IWRARVLDDNNGKAAGTVLSSDPLRIACGKGALEIVSGQSE------TGLY 286
Query: 298 LLGCPVI 304
+ G +
Sbjct: 287 MQGNRLA 293
>gi|34762475|ref|ZP_00143474.1| Methionyl-tRNA formyltransferase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27887874|gb|EAA24943.1| Methionyl-tRNA formyltransferase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 144
Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/140 (38%), Positives = 86/140 (61%), Gaps = 3/140 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMGT FA+ +L+ ++ H ++SV+T+ +P RG K S + K A +L
Sbjct: 5 MRIIFMGTPIFALPSLEK-INEKHEVISVFTKADKP-NARGKKINYSPIKKVALANNLKI 62
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E E+ + D+ VVVAYG ++P+ I++ K G N H+SLLPR+RGAAP
Sbjct: 63 YQPENFKDEALIEEIRNMQPDLIVVVAYGKILPKEIIDIPKYGVINLHSSLLPRFRGAAP 122
Query: 122 IQRAIMAGDNETGIAIMKMD 141
I AI+ GD ++G++IM ++
Sbjct: 123 INAAIINGDKKSGVSIMYVE 142
>gi|73984913|ref|XP_533713.2| PREDICTED: similar to 10-formyltetrahydrofolate dehydrogenase
(10-FTHFDH) (Aldehyde dehydrogenase 1 family member L1)
[Canis familiaris]
Length = 902
Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 72/316 (22%), Positives = 122/316 (38%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ + ++ + A++ V+ IP ++ A G H SLLPR
Sbjct: 54 FKFPRWRVKGQALPEVVAKYQALGAELNVLPFCSQFIPMEVIRAPSHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G I D LDTG + ++ I + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFTIFWADDGLDTGDLLLQKECEILPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K ++N+ +SAE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWDQSAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L E + G +PG V + + + + +Q
Sbjct: 234 WTEACGQKLTFFNSTLNTAGLLPEGEDLPIPGAHRPGVVTKVGLILFGNDDRMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ F G
Sbjct: 294 LEDGKMIPASHFFTGA 309
>gi|77918721|ref|YP_356536.1| methionyl-tRNA formyltransferase [Pelobacter carbinolicus DSM 2380]
gi|77544804|gb|ABA88366.1| methionyl-tRNA formyltransferase [Pelobacter carbinolicus DSM 2380]
Length = 314
Score = 94.2 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 67/314 (21%), Positives = 120/314 (38%), Gaps = 16/314 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
LR+V++G L+AL+ + I V +G + +++ L A
Sbjct: 8 LRIVYIGARIVGHHCLKALLEAGAHIAGVLYLDESKSGV---TVAHCSFDDLIRDYRLNA 64
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
T + + DV +VV ++ + +L + GF H +LLP RG AP
Sbjct: 65 RPFTSLHDPDILVWMRACRPDVGMVVGVSQLVGEALLATPRQGFIGMHPTLLPGGRGRAP 124
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I ++ G +TG+++ D DTG + +P+ L + A +V++
Sbjct: 125 IPWTLIKGLQQTGVSLFWCDPGADTGDILLQESLPVYYEDTAGVLGARTDDVAAQLLVKS 184
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ L P PQ + T + + +++ +++ +R P+PGA+
Sbjct: 185 LPLLASGQPPRIPQDDAKATVWPRRRPEDGIIDWAWPKRRIYDWVRALTRPYPGAFTYAG 244
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDF 297
L E + PG VI +AC +G V + LQ F
Sbjct: 245 DRKLFIWS--CRESLDERKAAPGTVIALLPGGILVACGEGNVLLSDLQWE-----TGAAF 297
Query: 298 LLG-CPVIIGCIVG 310
G ++ G I+G
Sbjct: 298 ATGDTSIVPGQILG 311
>gi|301617726|ref|XP_002938272.1| PREDICTED: LOW QUALITY PROTEIN: 10-formyltetrahydrofolate
dehydrogenase-like [Xenopus (Silurana) tropicalis]
Length = 792
Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 68/313 (21%), Positives = 121/313 (38%), Gaps = 24/313 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F + L+ H +V V+T P + + A++ +P
Sbjct: 1 MQIAVIGQSLFGREVYRELLKEGHQVVGVFTIPDKNG-------KADPLGADAEKDGIPV 53
Query: 63 LVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ + E++ + A++ V+ IP +++ K G H S+LPR
Sbjct: 54 FKFPRWRVKGQAIPEVVEKYKALEAELNVLPFCSQFIPMEVIDCPKHGSIIYHPSILPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPI-SSNINTAGLQQELSVLCA 175
RGA+ I +M GD G I D LDTG + R+ + + + L
Sbjct: 114 RGASAINWTLMQGDKIGGFTIFWADDGLDTGDILLQRECEVLPDDTVNTIYNRFLFPEGV 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MVEA+ + + N P Q G TY K ++N+ + AE +HN IR PGA
Sbjct: 174 KGMVEAVRLIAEGNAPRIKQATEGATYDPMQKKENAKINWDQPAEAIHNFIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLLESQLVEGEGKPGEV---------INPNFTIACSQG-AVRIMRLQ 285
W + S +G+P E+ + + G + + +Q
Sbjct: 234 WTVVGDQQLTFFGSSFISNGPAPDGQPLEIPGAFRPAVVTKTGLVLFGNDGQKLSVKNIQ 293
Query: 286 RAGGRVLDIGDFL 298
G+++ +
Sbjct: 294 FEDGKMIPASQYY 306
>gi|254251082|ref|ZP_04944400.1| Methionyl-tRNA formyltransferase [Burkholderia dolosa AUO158]
gi|124893691|gb|EAY67571.1| Methionyl-tRNA formyltransferase [Burkholderia dolosa AUO158]
Length = 273
Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 91/241 (37%), Positives = 137/241 (56%), Gaps = 10/241 (4%)
Query: 75 QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETG 134
+ DV VV AYGL++PQ +L+ + G N HASLLPRWRGAAPI RAI AGD ETG
Sbjct: 31 CCAATPHDVMVVAAYGLLLPQEVLDIPRHGCINIHASLLPRWRGAAPIHRAIEAGDAETG 90
Query: 135 IAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNL-PLS 193
+ +M+MD LDTG + ++ I+ + T+ L L+ A +V+A+ +LE++ P +
Sbjct: 91 VTLMQMDAGLDTGAMIDEARIAIAPDDTTSTLHDRLAAEGARLIVDALARLERDGTLPAT 150
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLES 253
PQ +G TYAEKI K E +++ + A+ + +RA PFPG + KL +
Sbjct: 151 PQPADGATYAEKIGKHEAALDWRKPADVLARQVRAFDPFPGGVATLDGAAI----KLWAA 206
Query: 254 QLVEG--EGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCI 308
+ + E PG +++ +AC GA+R+ +LQ+ GG+ L +FL G P+ G
Sbjct: 207 EPLSARVEAAPGTIVDAAPDGVIVACGSGALRVTQLQKPGGKRLPAREFLAGSPLAAGQR 266
Query: 309 V 309
Sbjct: 267 F 267
>gi|327272378|ref|XP_003220962.1| PREDICTED: probable 10-formyltetrahydrofolate dehydrogenase
ALDH1L2-like [Anolis carolinensis]
Length = 924
Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 74/310 (23%), Positives = 118/310 (38%), Gaps = 23/310 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F Q L H +V V+T P + + A++ P
Sbjct: 23 KLKLALIGQSVFGQEVYQHLQKEGHKVVGVFTVPDKNG-------KADPLAFAAEKDGTP 75
Query: 62 ALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ E + + S A++ V+ IP +++ + G H S+LPR
Sbjct: 76 VFKFPRWRVKGKTIPEVIDAYKSVGAELNVLPFCTQFIPMDVIDNPQHGSIIYHPSILPR 135
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G + D LDTGP+ R+ + N L +
Sbjct: 136 HRGASAINWTLIHGDKKAGFTVFWADDGLDTGPILLQRECDVGPNDTVDDLYNRFLFPMG 195
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G TY K + + + A +HN IR PG
Sbjct: 196 IKAMVEAVQLIADGKAPRIPQSEEGATYEGIQKKENAEIPWDQPASALHNWIRGHDKVPG 255
Query: 235 AWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQ-GAVRIMRLQ 285
AW + L E ++G KPG V + + + + LQ
Sbjct: 256 AWATIDGQMVTFYGSSLLEGSAPPGEELAIKGAAKPGLVTKNGLVLFGNDEKMLLVRNLQ 315
Query: 286 RAGGRVLDIG 295
GR++
Sbjct: 316 FEDGRMIPAS 325
>gi|300786916|ref|YP_003767207.1| methionyl-tRNA formyltransferase [Amycolatopsis mediterranei U32]
gi|299796430|gb|ADJ46805.1| methionyl-tRNA formyltransferase [Amycolatopsis mediterranei U32]
Length = 314
Score = 93.8 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 67/309 (21%), Positives = 123/309 (39%), Gaps = 19/309 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV G + TLQAL+ + H I V T P + + +V A +P
Sbjct: 1 MRVAMFGYQTWGHRTLQALIDAGHEIALVVTHP--KSDHAYERIWADSVADLAAAHDIPV 58
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L+ + E L D+ V + +P I + G N H SLLP + G +P
Sbjct: 59 LLRNRPDDAELLAELKAADLDLIVANNWRTWLPPEIFALPRHGTLNIHDSLLPAYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ E G+ MD LD G + R +P+ T L L A EA
Sbjct: 119 LIWAMINGEPEVGVTAHMMDGELDAGDIVLQRAIPVGPADTTTDLFHRTVDLIAPITAEA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E P PQ ++ K ++ ++ +++ ++ +RAL +
Sbjct: 179 IALIETGYTP-VPQDRAKASFFHKRARRDSLIDWTLPPADLERFVRAL---SDPYPNAFA 234
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAGG 289
++ E +++ ++ + +G G PG + + A + + R++ A G
Sbjct: 235 YHRGEELRITKASVSQGNYGGTPGRIFIREGDGVVVVAGPDARRGQSPGLLVERVRTADG 294
Query: 290 RVLDIGDFL 298
L ++
Sbjct: 295 TELPAHEYF 303
>gi|330904719|gb|EGH35291.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv.
japonica str. M301072PT]
Length = 50
Score = 93.4 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 7 FMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
F GT EFA L+AL+ S H IV+VYTQP RPAG RG K + S V + A +
Sbjct: 1 FAGTPEFAAEHLKALLDSPHQIVAVYTQPDRPAG-RGQKLMPSPVKQLALQ 50
>gi|42782958|ref|NP_980205.1| methionyl-tRNA formyltransferase [Bacillus cereus ATCC 10987]
gi|42738885|gb|AAS42813.1| methionyl-tRNA formyltransferase, putative [Bacillus cereus ATCC
10987]
Length = 255
Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 116/234 (49%), Gaps = 6/234 (2%)
Query: 81 ADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKM 140
D+ V A+G ++P IL A K G N HASLLP RG API AIM G +TGI IM M
Sbjct: 21 PDLIVTAAFGQIVPNEILEAPKYGCINVHASLLPELRGGAPIHYAIMEGKEKTGITIMYM 80
Query: 141 DKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGI 200
+ LD G + +V I T L +LS AH + + + L Q L Q E +
Sbjct: 81 VEKLDAGDIXTQVEVEIEERETTGSLFDKLSEAGAHLLSKTVPLLIQGKLEPIKQSEEEV 140
Query: 201 TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEG 260
T+A I + + ++++ ++ E V+NHIR L+P+P A+ + + ++ E V
Sbjct: 141 TFAYNIKREQEKIDWTKTGEEVYNHIRGLNPWPVAYTTLA--GQVVKVWWGEKVPVTKSA 198
Query: 261 KPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ G ++ F +A V++ LQ +G + + FL G IG +G
Sbjct: 199 EAGTIVAIEEDGFVVATGNETGVKVTELQPSGKKRMSCSQFLRGTKPEIGTKLG 252
>gi|326666498|ref|XP_002661418.2| PREDICTED: probable 10-formyltetrahydrofolate dehydrogenase
ALDH1L2-like [Danio rerio]
Length = 923
Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 73/310 (23%), Positives = 123/310 (39%), Gaps = 23/310 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYTNLRKQGHKVVGVFTVPDKDG-------KADPLAVVAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + + A++ V+ IP +++ K G H S+LP+
Sbjct: 75 VFKFPRWRVKGKPIPEVVEAYKAVGAELNVMPFCSQFIPMNVIDFPKHGSIIYHPSILPK 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G ++ D LDTGP+ ++ + N L
Sbjct: 135 HRGASAINWTLIEGDKKAGFSVFWADDGLDTGPILLQKECQVEPNDTVDTLYNRFLFPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G +Y K +VN + AE +HN IR PG
Sbjct: 195 IKAMVEAVQLIANGKAPKIPQSEEGASYEGIQKKSNAKVNMAQPAEAIHNWIRGHDKVPG 254
Query: 235 AWLEMMIGNKHER-IKLLESQL-------VEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW+ M +L + +EG +PG + + S G A+++ LQ
Sbjct: 255 AWVVMDGKPVTVYGSSVLSGSVPAGQPIDIEGASQPGLITKSGLLLFGSDGKALQVKSLQ 314
Query: 286 RAGGRVLDIG 295
G+++
Sbjct: 315 FEDGKMIPAS 324
>gi|213622809|ref|ZP_03375592.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 212
Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 70/212 (33%), Positives = 114/212 (53%), Gaps = 11/212 (5%)
Query: 105 FYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTA 164
N H SLLPRWRGAAPIQR++ AGD ETG+ IM+MD LDTG + + PI++ +
Sbjct: 4 CINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLACPITAEDTSG 63
Query: 165 GLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHN 224
L +L+ L ++ + +L Q E +T+AEK+SK E R+++ SA +
Sbjct: 64 SLYNKLAELGPQGLITTLKQLADGTATPEAQNEALVTHAEKLSKEEARIDWSLSAAQLER 123
Query: 225 HIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGK--PGEVI---NPNFTIACSQGAV 279
IRA +P+P +WLE+ + +K+ ++ ++E + PG ++ +A +G +
Sbjct: 124 CIRAFNPWPMSWLEI----DGQPVKVWQASVIEDATQSLPGTILAATKQGIQVATGKGIL 179
Query: 280 RIMRLQRAGGRVLDIGDFLLGCP--VIIGCIV 309
++ LQ AG + + D L I G +
Sbjct: 180 NLLSLQPAGKKAMSAQDLLNSRREWFIPGNRL 211
>gi|195039189|ref|XP_001990879.1| GH19599 [Drosophila grimshawi]
gi|193895075|gb|EDV93941.1| GH19599 [Drosophila grimshawi]
Length = 349
Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 89/312 (28%), Positives = 142/312 (45%), Gaps = 31/312 (9%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+V+F GT F++ +L L S + +V T KS + V A + LP
Sbjct: 37 KVLFFGTDNFSLPSLTKLHQSKVDV-AVVTS---------FKSPANCVRSYADKHKLPLY 86
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
++ ++ +VV++G +IP I+NA G N HASLLPRWRGAAPI
Sbjct: 87 RWPITAEQC------TPFELGIVVSFGHLIPLHIINALPRGIINVHASLLPRWRGAAPII 140
Query: 124 RAIMAGDNETGIAIMKMDKH-LDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AIM GD +TGI+IM++ H D GP+ R++ + S+I L LS L A +V+ +
Sbjct: 141 YAIMNGDAKTGISIMQIQPHRFDIGPILNQREISLRSDIFLPELHSTLSQLGAELLVDTV 200
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRS--------AENVHNHIRALSPFPG 234
LE+ ++PQ E TYA KI+ T + + ++ + F
Sbjct: 201 HHLEERLSKVTPQDETLATYAPKITPQITEIVWSHQTALEIFARHRALYGFKHLSTSFEE 260
Query: 235 AWLEMMIGNKHERIKLLESQLVEGEGKPGEV----INPNFTIACSQGA-VRIMRLQRAGG 289
++++ +HER + PG + + I C+ G + + +L+ G
Sbjct: 261 RQIQLLELKQHEREWD-RAAAPTAALAPGCFCFNRLRRSLIIGCAGGTQLELKQLRLEGR 319
Query: 290 RVLDIGDFLLGC 301
R + DF G
Sbjct: 320 RPMSAQDFNNGY 331
>gi|302522493|ref|ZP_07274835.1| methionyl-tRNA formyltransferase [Streptomyces sp. SPB78]
gi|318058828|ref|ZP_07977551.1| methionyl-tRNA formyltransferase [Streptomyces sp. SA3_actG]
gi|318075690|ref|ZP_07983022.1| methionyl-tRNA formyltransferase [Streptomyces sp. SA3_actF]
gi|302431388|gb|EFL03204.1| methionyl-tRNA formyltransferase [Streptomyces sp. SPB78]
Length = 317
Score = 93.0 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 66/312 (21%), Positives = 122/312 (39%), Gaps = 20/312 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV +G + TL+AL+ S H + V T P + K V + A++ +P
Sbjct: 1 MRVVMLGYQTWGHRTLRALLDSGHEVALVVTHP--RSEHAYEKIWDDNVAELAEKNGVPV 58
Query: 63 -LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L E + D+ V + +P + + G N H SLLP + G +P
Sbjct: 59 LLRNRPDDDELLDAVREARPDIIVANNWRTWLPPELFDLPPHGTLNIHDSLLPAYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G+ G+ +M+ LD G V R VP+ L L + E+
Sbjct: 119 IIWALINGEERVGVTAHRMNAELDAGDVLVQRSVPVGPADTATDLFHRTVDLIEPLVRES 178
Query: 182 MDKLEQNNL--PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+D + PQ ++ K + ++R++F AE + +RA +
Sbjct: 179 LDLIASGRDAGQWVPQDRARASFFHKRADEDSRIDFHWPAERLERLVRAQ---SDPYPNA 235
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRA 287
++ +R++++ + + EG G PG + + A + + R++
Sbjct: 236 YAFHRGKRLRIVSAGVSEGRYGGTPGRIFIREGDGVVVVAGPEAHSGRHPGLLVRRVRTE 295
Query: 288 GGRVLDIGDFLL 299
G D+
Sbjct: 296 DGTEYAARDYFR 307
>gi|152986831|ref|YP_001346975.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa PA7]
gi|166988217|sp|A6V1P0|ARNA_PSEA7 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|150961989|gb|ABR84014.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 662
Score = 93.0 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 61/291 (20%), Positives = 127/291 (43%), Gaps = 13/291 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT + V + ++AL+++ + I +V+T P + ++V + E +
Sbjct: 1 MTSKAVVFAYHDIGCTGIEALLNAGYEIAAVFTHADDPREN----TFYASVARLCAERGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
E+ D Y ++ +L G YN H SLLPR+RG
Sbjct: 57 ALHAPEDVNHPLWLERIRQLRPDFLFSFYYRRLLGAELLACAARGAYNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G+ +TG+ + +M + D GP+ + V I L +L +
Sbjct: 117 APANWVLVNGETQTGVTLHRMVERADAGPILAQQAVAIDPEDTALSLHGKLRKAAGALLR 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+++ L LP Q E+ ++ + + + +++ R A +++ +R P+PGA+ +
Sbjct: 177 DSLPLLALGVLPEVEQDESQASHFGRRTAADGLLDWHRPARQLYDLVRAVTQPYPGAFCQ 236
Query: 239 MMIGNKHERIKLLESQLVEGEG--KPGEVIN-PNFTIACSQGAVRIMRLQR 286
+ +++ + +++V G +PG V++ IAC + ++ + QR
Sbjct: 237 VGE----QKLIVWSAEVVAGNHGREPGSVLSCDPLRIACGEDSLVLRFGQR 283
>gi|32490909|ref|NP_871163.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|81741800|sp|Q8D341|ARNA_WIGBR RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|25166115|dbj|BAC24306.1| b2255 [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 654
Score = 92.6 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 65/286 (22%), Positives = 128/286 (44%), Gaps = 9/286 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V+ E L L+ ++SV T A K S+V KK+ + +P
Sbjct: 1 MKVIVFAYHEIGYIGLSCLIKLGFKVLSVITHIDDHASE---KIFFSSVKKKSLKHKIPV 57
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + ++ +LS D+ Y ++ + IL KLG +N H SLLP++RG +P
Sbjct: 58 FYPKNINNLKWIDYLSKLKPDIIFSFYYRKILSEDILKIPKLGSFNLHGSLLPKYRGCSP 117
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ TG+ + +M K +D G + + I + L ++L + + +
Sbjct: 118 LNWVLINGEKTTGVTLHRMTKKIDHGSILSQYSIKIEEKDTSKSLYKKLCYASMYILNKT 177
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + +N + ++ +Y K + +++ +SA N++N IR P+PGA+ +
Sbjct: 178 LPMILKNKINEIDCTDDFSSYFHKRYPKDGLIDWNQSANNIYNLIRALTKPWPGAFSYLF 237
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQ 285
+ E PG ++N N I+C + ++ I+ Q
Sbjct: 238 DKKIIIWKSKI---SFESYKTPGTILNFNPLIISCKKKSLEILSAQ 280
>gi|269791894|ref|YP_003316798.1| formyl transferase domain-containing protein [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269099529|gb|ACZ18516.1| formyl transferase domain protein [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 309
Score = 92.6 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 66/319 (20%), Positives = 125/319 (39%), Gaps = 27/319 (8%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M RV S+ L++L+ ++V+++T P+ ++ + A+ +
Sbjct: 1 MRPRVAVCAYSQVGTRCLESLLELGANVVALFTHQDNPSENLWFRTPD----RVAERHRI 56
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + + E D+ + Y +IP +L LG +N H SLLPR+RG
Sbjct: 57 PVIRDSLRSPEGAMALRELKPDLLLSFYYRDMIPGELLEIPPLGAFNVHGSLLPRYRGRV 116
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
+ A++ G+ TG + M D GPV +VPI + + + + L+ +
Sbjct: 117 SVHWAMIMGEMRTGATLHVMTPRPDDGPVVDREEVPIHLHDTSRDVMERLAEAAHRLIRR 176
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAE--NVHNHIRALSPFPGAWLE 238
A LE + PQ + +Y + + + R H P+PGA+
Sbjct: 177 AYPTLEDGSYRAVPQDQGAASYFGGRRPEDGLIQWDREDSLGAYHMVRALTRPYPGAFST 236
Query: 239 MMIGNKHERIKLLESQLVEGE----GKPGEVINP---NFTIACSQGAVRIMRLQRAGGRV 291
+ R+ + + + + +PG ++ + C GA+RI+ + G
Sbjct: 237 LAD---GRRLTIWRAHPLPEKAVPRAEPGTLMEDPEGYVLVRCMAGALRILEAELDGR-- 291
Query: 292 LDIGDFLLGCPVIIGCIVG 310
G P+ +G +G
Sbjct: 292 -------CGHPLDLG--LG 301
>gi|291532993|emb|CBL06106.1| Methionyl-tRNA formyltransferase [Megamonas hypermegale ART12/1]
Length = 174
Score = 92.6 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 87/168 (51%), Gaps = 7/168 (4%)
Query: 138 MKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIE 197
M MD LDTG + I+ ++ T L +L V A +++ + +E+N P Q +
Sbjct: 1 MYMDVGLDTGDMILKATTEITPDMTTEQLHDKLMVQGADLLLQTVQLIEENKTPREKQDD 60
Query: 198 NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVE 257
N YA+ ++ R+++ +SA+++HN +R L+ +P A+ + +++ K+ ++++
Sbjct: 61 NLSCYAKMLNNDNCRIDWTKSAQDIHNLVRGLNSWPVAYTTL----NNKKFKIWQTRVTT 116
Query: 258 GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
G G PG++I + +A +GA+ ++ +Q + ++ G
Sbjct: 117 GTGNPGQIIKLTKQSIIVATGEGAIELLEIQPPNKAKMPASSYINGHK 164
>gi|207079935|ref|NP_001128736.1| aldehyde dehydrogenase family 1 member L1 [Pongo abelii]
gi|59797917|sp|Q5RFM9|AL1L1_PONAB RecName: Full=Aldehyde dehydrogenase family 1 member L1; AltName:
Full=Cytosolic 10-formyltetrahydrofolate dehydrogenase;
Short=10-FTHFDH; Short=FDH
gi|55725122|emb|CAH89428.1| hypothetical protein [Pongo abelii]
Length = 902
Score = 92.3 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 70/316 (22%), Positives = 126/316 (39%), Gaps = 24/316 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V +T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGGFTVPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
++ + ++ + A++ V+ IP I+NA + G H SLLPR
Sbjct: 54 FKFSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIINAPQHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G +I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
MV+A+ + + P PQ E G TY K ++N+ + AE +HN IR PGA
Sbjct: 174 KGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGA 233
Query: 236 WLEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
W E L ++ + G +PG V + + + + +Q
Sbjct: 234 WTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNIQ 293
Query: 286 RAGGRVLDIGDFLLGC 301
G+++ +F G
Sbjct: 294 LEDGKMILASNFFKGA 309
>gi|241766902|ref|ZP_04764710.1| formyl transferase domain protein [Acidovorax delafieldii 2AN]
gi|241362643|gb|EER58481.1| formyl transferase domain protein [Acidovorax delafieldii 2AN]
Length = 296
Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 116/209 (55%), Gaps = 3/209 (1%)
Query: 105 FYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTA 164
N HASLLPRWRGAAPI RAI AGD ETG+ IM+MD LDTG + + K+PI+++ TA
Sbjct: 74 CLNIHASLLPRWRGAAPIHRAIEAGDAETGVTIMQMDAGLDTGDMLLIEKLPITAHDTTA 133
Query: 165 GLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHN 224
L L+ L +VEA++ L Q G+TYA KI K E+ V++ A +
Sbjct: 134 SLHDRLAELGGRMIVEALELAACGGLHPVKQPAEGVTYAHKIEKAESAVDWSLPAAAIGR 193
Query: 225 HIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRI 281
HIRA PFPGA + + S + + G+++ +AC + A+R+
Sbjct: 194 HIRAFDPFPGASTTLGNETIKLWDYEIHSYQRSLDERCGQIVATDGTGVLVACGEDALRL 253
Query: 282 MRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
LQR+GG+ L DFL G P+ G ++G
Sbjct: 254 TVLQRSGGKRLPASDFLRGFPLQPGMVLG 282
>gi|6016040|sp|O87726|FMT_VIBAL RecName: Full=Methionyl-tRNA formyltransferase
gi|3288667|dbj|BAA31225.1| Fmt [Vibrio alginolyticus]
Length = 247
Score = 92.3 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 72/230 (31%), Positives = 122/230 (53%), Gaps = 2/230 (0%)
Query: 82 DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMD 141
D+ V VAYG+++PQ +L+ KLG N H S+LPRWR AAPIQR+I AGD ETG+ IM+MD
Sbjct: 17 DLMVFVAYGMLLPQAVLDTPKLGCINVHGSILPRWRCAAPIQRSIWAGDAETGVTIMQMD 76
Query: 142 KHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGIT 201
LDTG + + +PI + +A + ++L+ L A+++ + + Q +
Sbjct: 77 IGLDTGDMLKIATLPIETTDTSASMYEKLAELGPEALIDCLADIAAGKAVPVKQDDELAN 136
Query: 202 YAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGK 261
YA+K+SK E R+N+ A ++ +RA +P+P + E + + +S+ V G
Sbjct: 137 YAKKLSKEEARINWNDDAAHIERCVRAFNPWPMSHFEAAENSIKVWKAVWQSKPVTTSGT 196
Query: 262 PGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP--VIIGCIV 309
+ + G + + +LQ G + + + D L +G ++
Sbjct: 197 IVQADKTGIYVVTGNGVLVLEQLQVPGKKAMSVQDILNSRAAWFEVGTLL 246
>gi|186475689|ref|YP_001857159.1| putative formyltransferase [Burkholderia phymatum STM815]
gi|184192148|gb|ACC70113.1| formyl transferase domain protein [Burkholderia phymatum STM815]
Length = 311
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 75/309 (24%), Positives = 121/309 (39%), Gaps = 20/309 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P+ +V A + +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVEVALVVTHEDSPSEN----IWFGSVASVAADHGI 56
Query: 61 PALVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P E + + D Y ++P +L G YN H SLLP++RG
Sbjct: 57 PVVTPADPKSPELRARVVDARPDFIFSFYYRHMLPVDLLAVAPRGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIIAQTPVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
A+ L P P +Y + R++F +S + V+N IRA++P +
Sbjct: 177 RALPALLAGEAPHLPNDLAHGSYFGGRKPEDGRIDFSQSGQQVYNLIRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQLVEGEGKPG-------EVINPNFTIACSQG-AVRIMRL--QRAGG 289
ER + ++L + G PG V + F C G + I L QR G
Sbjct: 234 FTDIGGERFVVARARLAQ-PGAPGADLPPGIHVGDNGFFATCGDGRVIAIHELRHQRDGN 292
Query: 290 -RVLDIGDF 297
RV+ +F
Sbjct: 293 ERVVTPAEF 301
>gi|311244574|ref|XP_003121504.1| PREDICTED: methionyl-tRNA formyltransferase, mitochondrial-like
[Sus scrofa]
Length = 390
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 80/319 (25%), Positives = 131/319 (41%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHS-------IVSVYTQP-PRPAGRRGLKSVLSAVHKKA 55
RV+F GT EFA TL+AL ++ + + V T P P P G V + A
Sbjct: 53 RVLFFGTDEFARETLRALHAARENKEEELIEKLEVVTVPSPSPKGL--------PVKQFA 104
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV VV ++G ++ + ++ G N H S LPR
Sbjct: 105 VQSQLPVY--------EWPDVGSGEYDVGVVASFGRLLSEALILKFPYGILNVHPSCLPR 156
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG API ++ GD TG+ IM++ D GP+ +P+ + L+ LS L
Sbjct: 157 WRGPAPIIHTVLHGDTITGVTIMQIRPKRFDVGPILKQEVIPVPPKTTSKELEAVLSRLG 216
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR------- 227
A ++ + L ++ Q G+T+A KIS + V + +
Sbjct: 217 ADMLISVLKNLPESLNSGRQQPAEGVTHAPKISAATSCVKWEEQTSEQIFRLYRAIGNII 276
Query: 228 -ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIM 282
+ + ++++ + + L +S+L E PG VI + C G + +
Sbjct: 277 PLQTLWMNNTIKLLDLVEVNSLLLTDSKLTEQAVIPGSVIYHKKSQILLVCCKDGWIGVR 336
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 337 SVML--KKTLTATDFYNGY 353
>gi|91783427|ref|YP_558633.1| hypothetical protein Bxe_A2388 [Burkholderia xenovorans LB400]
gi|91687381|gb|ABE30581.1| Putative transformylase protein [Burkholderia xenovorans LB400]
Length = 311
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 66/290 (22%), Positives = 112/290 (38%), Gaps = 9/290 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R + V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAIVFAYHNVGVRCLQVLLARGVDVALVVTHEDNPTEN----IWFGSVAAVAAEHGI 56
Query: 61 PALVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P+ E + D Y ++P +L G YN H SLLP++RG
Sbjct: 57 PVITPSDPKSPELRAAVSAARPDFIFSFYYRHMLPVELLALATRGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVIHGETETGATLHEMAARPDAGAIIAQTPVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+ L P P + +Y + R+++ + A+ V+N IR P+PGA+ +
Sbjct: 177 RVLPSLLAGEAPHLPNDISHGSYYGGRKPEDGRIDWTQPAQQVYNLIRAVAPPYPGAFTD 236
Query: 239 MMIGNKHE-RIKLLESQLVEGEGKPG-EVINPNFTIACSQG-AVRIMRLQ 285
+ R +L + + G V + C G A+ I L+
Sbjct: 237 LGGHRFMVARARLAAPGALRSDLPAGLHVSDNGIFAICGDGRAIAIHELR 286
>gi|156383966|ref|XP_001633103.1| predicted protein [Nematostella vectensis]
gi|156220168|gb|EDO41040.1| predicted protein [Nematostella vectensis]
Length = 355
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 68/315 (21%), Positives = 117/315 (37%), Gaps = 17/315 (5%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-----HSIVSVYTQPPRPAGRRGLKSVLSAV--HKKAQ 56
RV+F GT +FAV LQ L+ V + P R + + + A
Sbjct: 19 RVLFFGTDKFAVHPLQNLLERMQDGSLIENVELVCPPERRRAINKKVQNENFITAREYAI 78
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
E +P E D+ VV ++G +IP +++ G N H S+LP+W
Sbjct: 79 EEGIPIHEWKGKEGWAPEYSPEGPYDIGVVASFGYLIPNNVIDLCPSGMVNIHPSILPKW 138
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
RGAAP+ AI++G + TG++I+ + + D G + I +I L EL++L +
Sbjct: 139 RGAAPMTHAILSGASHTGVSIVGVSRDRFDHGKILLQENYKIRDDIMYDDLSDELAILGS 198
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
M+ ++ ++ Q + G + A + S +++
Sbjct: 199 RMMLYTIEHWDELWKTAKVQPKEGASKAPRNSIQTGFISWEDHTWEQIWGKWRALSTRVG 258
Query: 236 WLEMMIGNKHERIKLLESQLVEG-----EGKPGEVINPN----FTIACSQGAVRIMRLQR 286
G K IK+ ++ + E PG+ I C LQ
Sbjct: 259 IHTSWGGKKVRLIKMSPEKIEDDVEEIREALPGQTKYDKEREILFIKCKDDWAGFTELQF 318
Query: 287 AGGRVLDIGDFLLGC 301
++ DF
Sbjct: 319 ECKDIIKARDFANSY 333
>gi|50122067|ref|YP_051234.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pectobacterium atrosepticum SCRI1043]
gi|81644376|sp|Q6D2F1|ARNA_ERWCT RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|49612593|emb|CAG76043.1| probable formyl transferase [Pectobacterium atrosepticum SCRI1043]
Length = 673
Score = 91.9 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 64/316 (20%), Positives = 125/316 (39%), Gaps = 20/316 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + L+AL + + I +V+T P G ++V K A +P
Sbjct: 1 MKAIVFAYHDIGCVGLEALALAGYEIQAVFTHSDAP----GENHFYASVAKTAAGMDVPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ DV Y ++ IL G +N H SLLPR+RG AP
Sbjct: 57 FAPEDINHPLWVNRIRELAPDVIFSFYYRTILSDDILQLPSFGAFNLHGSLLPRYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ +TG+ + KM D G + V I L + A + +
Sbjct: 117 VNWVLVNGETQTGVTLHKMVSRADAGDIVAQSVVAIDDEDTALTLHGKCRTAAATLLAQQ 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEM- 239
+ + + L+PQ ++ +Y + + + +++ +SA ++N IR P+PGA+ +
Sbjct: 177 LPLIRSREIALTPQDDSQASYFGRRTAADGLIDWQKSAHEINNLIRAVTEPYPGAFTFLG 236
Query: 240 ----MIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDI 294
+I + G G +I+ + ++C + A+ I+ Q
Sbjct: 237 ERKVIIWRARVVKNNRVNVNHPHGGDAGSIISTSPLVVSCGEDALEIVSGQSE------A 290
Query: 295 GDFLLGCPVII--GCI 308
G ++ G + G +
Sbjct: 291 GLYMSGSRLAAEMGMV 306
>gi|295099651|emb|CBK88740.1| methionyl-tRNA formyltransferase [Eubacterium cylindroides T2-87]
Length = 261
Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 80/255 (31%), Positives = 139/255 (54%), Gaps = 2/255 (0%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R VFMGT + A L +++ + I V +QP + G R K V S V + A + +
Sbjct: 4 IRCVFMGTPQIAATVLSSMLEAGIKINLVVSQPDKKVG-RKQKIVYSPVKQVAVDHEIEC 62
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P ++ + ++++ L D+ V AYG +IP+ +LNA + G N H S+LP++RG API
Sbjct: 63 FQPVRIKE-DHQRILDLKPDLIVTCAYGQIIPEDLLNAPRFGCVNLHGSILPKYRGGAPI 121
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
QRAI GD E+G+++MKM K +D GPV + KV I S N+ + +++ + + +++
Sbjct: 122 QRAIWNGDKESGMSLMKMAKRMDAGPVLAIEKVKIESQDNSTSVFEKMGLAASKLILDNF 181
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + + Q E+ + +A I+K E +++F + + N IRALS PGA+ +
Sbjct: 182 ELICSDQAHYVEQDEDKVVFAPVITKQEEKIDFSKDDIEILNQIRALSFTPGAYGLIKNK 241
Query: 243 NKHERIKLLESQLVE 257
+ + V+
Sbjct: 242 KLKLLEATYQKEPVK 256
>gi|254796490|ref|YP_003081326.1| methionyl-tRNA formyltransferase [Neorickettsia risticii str.
Illinois]
gi|254589737|gb|ACT69099.1| methionyl-tRNA formyltransferase [Neorickettsia risticii str.
Illinois]
Length = 302
Score = 91.5 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 85/299 (28%), Positives = 140/299 (46%), Gaps = 20/299 (6%)
Query: 8 MGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
MG+S FAV TL L++ ++ VYT+PP+P G RGL + ++ H A E+ L P
Sbjct: 1 MGSSAFAVPTLLKLIADPQFEVLEVYTKPPKPKG-RGLLTSMTPTHSTALEYGLSVKTPF 59
Query: 67 KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
L EE DV VVV+YGL+IP ++L+ KL N H SLLPRWRG +PIQ I
Sbjct: 60 SLKGEELP-----PCDVIVVVSYGLIIPDKLLSHPKLAPLNIHPSLLPRWRGPSPIQYTI 114
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ GD E G++I+++ LD G + + +P+ + L +L+ L A + + L+
Sbjct: 115 LEGDKEAGVSIIRVTPELDAGAIYTQKAIPLDGTETYSTLHDQLANLGASMLHSVLKTLD 174
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+PQ+E TY++K+ + + I + + I +
Sbjct: 175 II--KPAPQVEEKATYSKKLPNSVSI--------DFSEGIELFLRKLRVFGAVSIELFGK 224
Query: 247 RIKLLESQLVEGE--GKPG-EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+K++E+ K G + + + G + ++ + + DFL G
Sbjct: 225 HVKIVEACRTTDSPITKVGVKTNSKKIFLQFKDGCAIVTTVKPENKKEMSTEDFLNGIR 283
>gi|325526702|gb|EGD04226.1| methionyl-tRNA formyltransferase [Burkholderia sp. TJI49]
Length = 194
Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 76/158 (48%), Positives = 93/158 (58%), Gaps = 10/158 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
TLRV+F GT EFA A L A+ + + V TQP RPAG RG+K SAV + A E +P
Sbjct: 4 TLRVIFAGTPEFAAAALAAIHEAGFPVPLVLTQPDRPAG-RGMKLQASAVKRYAVEHGMP 62
Query: 62 ALVPTKLGQEEYEQF---------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P L + S DV VV AYGL++PQ +L+ + G N HASL
Sbjct: 63 VAQPPSLRRAGKYPAEAADAIELLRSTPHDVMVVAAYGLLLPQEVLDIPRHGCINIHASL 122
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVA 150
LPRWRGAAPI RAI AGD ETG+ +M+MD LDTG +
Sbjct: 123 LPRWRGAAPIHRAIEAGDAETGVTLMQMDAGLDTGAMI 160
>gi|269115209|ref|YP_003302972.1| methionyl-tRNA formyltransferase [Mycoplasma hominis]
gi|268322834|emb|CAX37569.1| Methionyl-tRNA formyltransferase [Mycoplasma hominis ATCC 23114]
Length = 286
Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 72/292 (24%), Positives = 141/292 (48%), Gaps = 15/292 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+ +V GT +F+ T + L++ ++++ +QP R R + + + K A+++ +
Sbjct: 7 KINLVLAGTGQFSAKTFEPLLNDERFNVLAFISQPNRKL-DRNKNVIETEIFKLAKQYDI 65
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P K+ + + + + D + ++G IP IL K N H SLL ++RGAA
Sbjct: 66 KVFQPQKIKE-ILPELSAMDFDFFITASFGQFIPDSILKLPKKMPLNVHGSLLEKYRGAA 124
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+Q A++ GD ETGI +++M K +D G + KV I S + +L+ + + +
Sbjct: 125 PVQYALLNGDIETGITLIEMVKQMDAGDILESSKVKIDSADTAIEVFDKLADVASKNLGN 184
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ Q E+ +T+A KI G R++ + +V N IRA + PGA+L
Sbjct: 185 WLFEIYNGQYNRVAQDESKVTFAPKILNGMERIDQSENLSSVINKIRAFNDEPGAYLIY- 243
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVL 292
+++R+K+ + + I+ I + G + ++ Q G + +
Sbjct: 244 ---QNKRLKIFRASTTK--------ISTPLKIKFNDGYLYLIEYQFEGKKRV 284
>gi|301110572|ref|XP_002904366.1| methionyl-tRNA formyltransferase, putative [Phytophthora infestans
T30-4]
gi|262096492|gb|EEY54544.1| methionyl-tRNA formyltransferase, putative [Phytophthora infestans
T30-4]
Length = 376
Score = 91.5 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 73/330 (22%), Positives = 133/330 (40%), Gaps = 28/330 (8%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVS--------VYTQPPRPAGRRGLKSVLSAVH 52
RV+F GT + ++ATL+AL + S+ V V RP R K V
Sbjct: 29 PYRVLFFGTDDVSLATLKALHASSNEENVGNRLIEHIEVVCPSDRPMNGR-KKDEPVPVK 87
Query: 53 KKAQEFSLPALVPTKLGQ--EEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
+ AQ A + + ++ + + DV VVV++G + +L G N H
Sbjct: 88 RFAQRCGYKAYDTPSHLKSLKTWDFPATSHFDVGVVVSFGYFLHPHMLKNLHHGAINMHP 147
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKH-LDTGPVAFMRKVPISSNINTAGLQQE 169
SLLP++RG API A++ GD+ TG++++++D D G + + I I L +E
Sbjct: 148 SLLPKYRGPAPIHHALLNGDSTTGVSVIEIDPKAFDVGRILLQKHYDIKPGIQCHDLAKE 207
Query: 170 LSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRA- 228
L+ A +V+ + L Q + A K++ + + +A ++ + +A
Sbjct: 208 LASFGADCIVKTLGDLPMLKKTAVTQDDAVACKAPKLTFKDGLIFLNEAASDIFHRWQAL 267
Query: 229 ---------LSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACS 275
+E+ + E + + G + G + C+
Sbjct: 268 SSSVGVKVQFRGKVVKLIEVRLPTAEELQSVEADEDRNGPAEAGTFFFEKKRQALWLRCA 327
Query: 276 Q-GAVRIMRLQRAGGRVLDIGDFLLGCPVI 304
+ + +LQ+A +V DF G +
Sbjct: 328 DASWLLVTKLQQADRKVGAALDFCNGYRLK 357
>gi|226942062|ref|YP_002797136.1| Fmt [Laribacter hongkongensis HLHK9]
gi|226716989|gb|ACO76127.1| Fmt [Laribacter hongkongensis HLHK9]
Length = 266
Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 110/277 (39%), Positives = 153/277 (55%), Gaps = 17/277 (6%)
Query: 37 RPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQR 96
+P+GR+G SA K Q SLP E + ADV VV AYGL++PQ
Sbjct: 4 KPSGRQGHGRWNSACGSK-QPLSLP-------NDEAQAMLRAVEADVMVVAAYGLILPQA 55
Query: 97 ILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
+L+ +LG N HAS+LPRWRGAAPIQRAI+AGD E+G+ IM+M+ LDTGP+ + P
Sbjct: 56 VLDLPRLGCLNIHASILPRWRGAAPIQRAILAGDAESGVTIMQMEAGLDTGPMRHVVTTP 115
Query: 157 ISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFC 216
I + A L L L A A+V+ + ++ P Q E G+TYA+K+SK E +++
Sbjct: 116 IGLDDTAASLHDRLMALGASAIVDVLATPDRY--PPVIQPEAGVTYAQKLSKEEAGLDWN 173
Query: 217 RSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIA 273
A + +R P PGAW + E +K+ + V G G PG VI T+A
Sbjct: 174 LPAAELDRRVRGYCPVPGAWTRLGG----ETLKVWAATPVAGSGMPGMVIAADRHGLTVA 229
Query: 274 CSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
C +GA+ I LQ AGG+ L+ F+ G P + G +G
Sbjct: 230 CGEGALCITSLQPAGGKRLEASAFVAGRPGLAGQQLG 266
>gi|196037035|ref|ZP_03104376.1| methionyl-tRNA formyltransferase [Bacillus cereus W]
gi|195990354|gb|EDX54381.1| methionyl-tRNA formyltransferase [Bacillus cereus W]
Length = 91
Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Query: 222 VHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGA 278
+ NHIR ++P+P A + +R+K+ E+QL EGEG PG+VI + IA QGA
Sbjct: 1 MFNHIRGMNPWPVAHTFLEG----QRLKIYEAQLAEGEGLPGQVIVKTKKSLVIATGQGA 56
Query: 279 VRIMRLQRAGGRVLDIGDFLL--GCPVIIGCIVG 310
+ ++ +Q AG + I DFL G + +G I+G
Sbjct: 57 LSLIVVQPAGKPKMSIIDFLNGIGRKLEVGDIIG 90
>gi|295835964|ref|ZP_06822897.1| methionyl-tRNA formyltransferase [Streptomyces sp. SPB74]
gi|197699520|gb|EDY46453.1| methionyl-tRNA formyltransferase [Streptomyces sp. SPB74]
Length = 317
Score = 91.1 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 67/312 (21%), Positives = 121/312 (38%), Gaps = 20/312 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV +G + TL+AL+ S H + V T P + K V + A++ +P
Sbjct: 1 MRVVMLGYQTWGHRTLRALLDSGHEVALVVTHP--RSEHAYEKIWDDNVAELAEKNGVPV 58
Query: 63 -LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L E D+ V + +P + + G N H SLLP + G +P
Sbjct: 59 LLRNRPDDDELLAAVREARPDIIVANNWRTWLPPELFDLPPHGTLNIHDSLLPAYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G+ G+ +M+ LD G V R VP+ L L + EA
Sbjct: 119 IIWALLNGEERVGVTAHRMNGELDAGDVLVQRAVPVGPADTATDLFHRTVDLIEPIVREA 178
Query: 182 MDKLEQNNL--PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + PQ ++ K + ++R++F AE + +RA +
Sbjct: 179 LGLIASGRDAGQWVPQDRARASFFHKRADEDSRIDFHWPAERLERLVRAQ---SDPYPNA 235
Query: 240 MIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRA 287
++ +R++++ + + EG G PG + + A + + R++
Sbjct: 236 YAFHRGKRLRIVSAGVSEGRYGGTPGRIFIREGDGVVVVAGPEAHTGRHPGLLVRRVRTE 295
Query: 288 GGRVLDIGDFLL 299
G GD+
Sbjct: 296 DGTEYAAGDYFR 307
>gi|330890234|gb|EGH22895.1| methionyl-tRNA formyltransferase [Pseudomonas syringae pv. mori
str. 301020]
Length = 200
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 72/203 (35%), Positives = 112/203 (55%), Gaps = 9/203 (4%)
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
+PRWRGAAPIQRA+ AGD E+G+ +M+M+ LDTGP+ PI++ L L+
Sbjct: 1 MPRWRGAAPIQRAVQAGDAESGVTVMQMEAGLDTGPMLLKAVTPITAQDTGGTLHDRLAE 60
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
L A+++A+ L +L Q ++ YA K++K E R+++ R A+ + IRA +P+
Sbjct: 61 LGPTAVLQAIAGLADGSLVGEVQDDSLANYAHKLNKDEARLDWTRPADELERLIRAFNPW 120
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGG 289
P + E +K+L + L EG+G PG V+ +AC Q A+R+ RLQ GG
Sbjct: 121 PICHSTL----NEETLKVLAADLAEGQGAPGTVLSASKDGLIVACGQNALRLTRLQLPGG 176
Query: 290 RVLDIGDFLLGCP--VIIGCIVG 310
+ L+ D IG ++G
Sbjct: 177 KPLNFADLFNSRREKFAIGTVLG 199
>gi|221131393|ref|XP_002165541.1| PREDICTED: similar to predicted protein, partial [Hydra
magnipapillata]
Length = 375
Score = 90.7 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 61/303 (20%), Positives = 105/303 (34%), Gaps = 14/303 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+ +G S F + L H IV V+T P G K + + A+ +
Sbjct: 3 ALRIAVIGQSNFGADVYKLLRQKGHEIVGVFTIPD----NNGKKD---PLAQVAEHDGVK 55
Query: 62 ALVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ ++ E++ S A++ V+ IP +++ K G H SLLPR
Sbjct: 56 VFKYARWQLQKIAIPEIVEEYQSLKAEINVMPFCSQFIPAEVVDFPKHGSIIYHPSLLPR 115
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
RGA+ + +M+GD + G I D LDTGP+ ++ I+ N L
Sbjct: 116 HRGASAVNWTLMSGDKKGGFTIFYADDGLDTGPILLQKETNIAPNETVDTLYNRFLYPEG 175
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
+ +L N +KI ++ + H
Sbjct: 176 IKGMVEAVELIANGCAPKISQPTEGASYDKIWNKKSLAQINWNQPANVLHNFIRGNDKEV 235
Query: 236 WLEMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGA-VRIMRLQRAGGRVLDI 294
+ + ++G P V I S G + + LQ + G+++
Sbjct: 236 SFFGSSMYLRKSLPEGIPCFIDGLAHPALVHKNGMIITGSDGLRINVKTLQLSDGKMVPA 295
Query: 295 GDF 297
F
Sbjct: 296 SKF 298
>gi|158317680|ref|YP_001510188.1| formyl transferase domain-containing protein [Frankia sp. EAN1pec]
gi|158113085|gb|ABW15282.1| formyl transferase domain protein [Frankia sp. EAN1pec]
Length = 315
Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 70/309 (22%), Positives = 123/309 (39%), Gaps = 18/309 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TLQAL+ S + + V T K +V A E +P
Sbjct: 1 MRVVMFGYQTWGHRTLQALLDSDNDVTLVVTHE--KGEGDYEKIWDDSVADLATEAGVPV 58
Query: 63 -LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ ++ + + DV V + IP +I N +LG N H SLLP + G AP
Sbjct: 59 AIRNRPDDEDLMSLLKAADPDVIVATNWRTWIPPQIFNLPRLGTLNIHDSLLPAYAGFAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ E G+ M LD G V R+V + TA L L VE
Sbjct: 119 LIWALINGEPEVGVTAHMMTDVLDAGDVVLQRRVQVGPRDTTADLFHRTLALFGPMAVEG 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ + Q + ++ K S ++ +++ +AE + +RA +
Sbjct: 179 LELMASGRTEWEKQDRSKASFFHKRSPLDSLIDWTWTAEELDRLVRAQ---CDPYPNAYT 235
Query: 242 GNKHERIKLLESQLVEG--EGKPGEVI---NPNFTIACSQGA-------VRIMRLQRAGG 289
ER++++ +++ +G G PG + I A + + ++ G
Sbjct: 236 YRNGERLRIVSAEVSKGIYGGTPGRIFIREGDGVVIVAGAEARRGRSHGLLVRTVRTDDG 295
Query: 290 RVLDIGDFL 298
R L ++
Sbjct: 296 RELPATEYF 304
>gi|323201906|gb|EFZ86968.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
Length = 648
Score = 90.7 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 128/272 (47%), Gaps = 13/272 (4%)
Query: 19 QALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL-VPTKLGQEEYEQFL 77
QA++ + + I +++T PA + +V + A E +P ++
Sbjct: 5 QAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAELGIPVYAPDNVNHPIWVDRIA 60
Query: 78 SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAI 137
D+ Y ++ + IL+ G +N H SLLP +RG AP+ ++ G++ETG+ +
Sbjct: 61 ELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAPLNWVLVNGESETGVTL 120
Query: 138 MKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIE 197
+M K D G + ++V I+ + L +L + + ++ ++P PQ E
Sbjct: 121 HRMVKRADAGEIVASQRVAIAQDDVALTLHHKLCQAARQLLNSILPTMKCGDIPSVPQRE 180
Query: 198 NGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIGNKHERIKLLESQLV 256
+ TY + + +++ + VHN +R +P+PGA+ N ++ + S++
Sbjct: 181 SDATYYGRRRPEDGLIDWHKPVSTVHNLVRAVAAPWPGAF----SYNGSQKFTIWSSRIC 236
Query: 257 -EGEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
+ +G PG VI+ + +AC+ GA+ I+ Q
Sbjct: 237 PDAQGALPGSVISVSPLRVACADGALEIITGQ 268
>gi|226325270|ref|ZP_03800788.1| hypothetical protein COPCOM_03062 [Coprococcus comes ATCC 27758]
gi|225206618|gb|EEG88972.1| hypothetical protein COPCOM_03062 [Coprococcus comes ATCC 27758]
Length = 177
Score = 90.3 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 191 PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKL 250
Q E+ YA+ ++K +++ ++A + IR L+P+P A+ + + + +K+
Sbjct: 54 TPQKQGESTTEYAKMLNKKSGEIDWTKTAVEIERLIRGLNPWPSAYTQ----WEGKTMKI 109
Query: 251 LESQLVE-----GEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
E+++ + +PG + F + +G + I LQ G + ++ FL G
Sbjct: 110 WEAEVEDVVETIDTHEPGTITEVTKHGFKVQTGEGRLAIKSLQIPGKKRMEADAFLRGYH 169
Query: 303 VIIGCIVG 310
+ G +G
Sbjct: 170 IETGEKLG 177
>gi|187923789|ref|YP_001895431.1| formyltransferase [Burkholderia phytofirmans PsJN]
gi|187714983|gb|ACD16207.1| formyl transferase domain protein [Burkholderia phytofirmans PsJN]
Length = 311
Score = 90.3 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 67/293 (22%), Positives = 114/293 (38%), Gaps = 15/293 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P+ +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNPSEN----IWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P+ E + D Y ++P +L G YN H SLLP++RG
Sbjct: 57 PVVTPSDPKSPELRAAVSAARPDFIFSFYYRHMLPADVLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVIHGETETGATLHEMAAKPDAGAILAQTPVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L P P +Y + R+++ ++A+ V+N IRA++P +
Sbjct: 177 RVLPSLLAGEAPHLPNDIAQGSYYGGRKPEDGRIDWTQTAQQVYNLIRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQLV-----EGEGKPGEVINPNFTIA-CSQG-AVRIMRLQ 285
R + ++L + PG ++ N A C G A+ I L+
Sbjct: 234 FTDIGERRFIVARARLAVPGALRSDLPPGLHVSDNAVFAICGDGRAIAIHELR 286
>gi|158288884|ref|XP_310702.4| AGAP000398-PA [Anopheles gambiae str. PEST]
gi|157018786|gb|EAA06675.5| AGAP000398-PA [Anopheles gambiae str. PEST]
Length = 348
Score = 89.9 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 77/314 (24%), Positives = 130/314 (41%), Gaps = 29/314 (9%)
Query: 3 LRVVFMGTSEFAVATLQA----LVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
L+V+F GT F++ +L++ LV++ + V T K+ + V + ++
Sbjct: 37 LKVLFFGTDHFSLPSLKSIHTNLVNNGRVERLEVVTS---------FKAAKNPVKQYSRA 87
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP + D+ VVV++G +IP+ ++ G N HASLLP+ R
Sbjct: 88 AGLPLHDWAACTP-----ATAGRFDLGVVVSFGHLIPETFIDCFDRGMLNVHASLLPKLR 142
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
GAAPI AI G+ TGI+IM++ D G + V I + L L+ + A
Sbjct: 143 GAAPIVHAIANGEQRTGISIMRIKPKQFDVGEILLQSAVSIGRDTLMPELHDRLAAIGAD 202
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
+V ++ LE L+ Q + TYA KI + + ++
Sbjct: 203 CLVTCIEDLEGYYQRLTVQNDAEATYAPKIDPKFAEIRWHQATAVSVYDRYRALYGLRPL 262
Query: 237 LEMMIGNKHERIKL----LESQLVEGEGKPGEVI----NPNFTIACSQG-AVRIMRLQRA 287
L G + KL +S +PG++ + + C G A+ +++L
Sbjct: 263 LTNFGGELVKLFKLSFDSTQSVPAVPADRPGQLEYSKRSRQLLVRCGDGRALELLQLSVG 322
Query: 288 GGRVLDIGDFLLGC 301
G + L DF G
Sbjct: 323 GKKTLSGQDFYNGF 336
>gi|330982945|gb|EGH81048.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 271
Score = 89.9 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 67/272 (24%), Positives = 112/272 (41%), Gaps = 10/272 (3%)
Query: 19 QALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL-VPTKLGQEEYEQFL 77
QAL+ + + I +V+T P K+ +V + + E+
Sbjct: 2 QALLDAGYEIAAVFTHADDPKE----KTFFGSVAQMCARHGIAVHAPEDPNHPLWVERIG 57
Query: 78 SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAI 137
D Y ++ +L K N H SLLPR+RG AP ++ G++ETG+ +
Sbjct: 58 KLAPDFIFSFYYRQLLGDSLLACAKKAALNLHGSLLPRYRGRAPANWVLVNGESETGVTL 117
Query: 138 MKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNL-PLSPQI 196
+M K D GP+ ++V IS+ L +L A + E + L P +PQ
Sbjct: 118 HQMVKRADAGPIVAQQRVSISATDTALTLHGKLRDAAADLLCETLPLLAAQGQLPATPQD 177
Query: 197 ENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIGNKHERIKLLESQL 255
E+ TY + + + +++ A ++N IR P+PGA+ + +
Sbjct: 178 ESRATYFGRRTPADGLIDWSLPATQLYNLIRAVTQPYPGAFCPVGDNK--LIVWAASVDT 235
Query: 256 VEGEGKPGEVINPN-FTIACSQGAVRIMRLQR 286
PG VI+ IAC G++ I QR
Sbjct: 236 SSNGEAPGTVISHEPLRIACGDGSLVITAGQR 267
>gi|289742455|gb|ADD19975.1| methionyl-tRNA formyltransferase [Glossina morsitans morsitans]
Length = 354
Score = 89.9 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 86/318 (27%), Positives = 145/318 (45%), Gaps = 34/318 (10%)
Query: 3 LRVVFMGTSEFAVATLQALVSS----SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
++++F GT F++ TL+ L + H + V T K+ + V + AQ+
Sbjct: 32 IKLLFFGTDNFSLPTLKILHKNCNCRGHGDLGVVTS---------FKNPANCVREYAQQH 82
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+L L + D+ +VV++G +IP ++ A LG N HASLLPRWRG
Sbjct: 83 NL------LLYKWPVSPSDCMLYDIGIVVSFGHLIPTSVIQAFPLGMINVHASLLPRWRG 136
Query: 119 AAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
AAPI AIM GD ETG++IM+++ D G V VPI ++ L +L+ A
Sbjct: 137 AAPIIHAIMNGDTETGVSIMRIEPKRFDVGGVFAQCCVPIKPHVLMPELHTQLAEEGAKL 196
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNF-CRSAENVHNHIRALSPFPGAW 236
+++ + Q+ + Q E+ +TYA KI++ T N+ S+ ++N RAL +
Sbjct: 197 LMKVIKTYPQSFEKVEVQNEDKVTYAPKITERLTEANWLTMSSLQLYNRYRALYGYKMLN 256
Query: 237 LEMMIGNKHERIKLLESQLV--------EGEGKPGEVIN----PNFTIACSQGA-VRIMR 283
+ + N + L S +PG + + C+Q + + +
Sbjct: 257 TKFLGKNLNLIDVRLPSSNSTDVISNNFPDYEQPGSFVFSKELKCLLVLCAQRTHIEVHQ 316
Query: 284 LQRAGGRVLDIGDFLLGC 301
L+ G + + DF G
Sbjct: 317 LRLEGKKTMTAADFNNGF 334
>gi|261820658|ref|YP_003258764.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pectobacterium wasabiae WPP163]
gi|261604671|gb|ACX87157.1| NAD-dependent epimerase/dehydratase [Pectobacterium wasabiae
WPP163]
Length = 673
Score = 89.9 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 64/320 (20%), Positives = 131/320 (40%), Gaps = 28/320 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + L+ALV + + I +V+T P G ++V K A +P
Sbjct: 1 MKAIVFAYHDIGCVGLEALVLAGYEIQAVFTHSDAP----GENHFYASVAKTAAGMDVPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ DV Y ++ IL +G +N H SLLPR+RG AP
Sbjct: 57 FAPEDVNHPLWVNRIRELAPDVIFSFYYRTLLSDDILQIPLVGAFNLHGSLLPRYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ +TG+ + KM D G + V I L + A + +
Sbjct: 117 VNWVLVNGETQTGVTLHKMVSRADAGDIVAQSVVAIDDEDTALTLHGKCRTAAAALLAQQ 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + + L+PQ ++ +Y + + + +++ +SA ++N IR P+PGA+ +
Sbjct: 177 LPLIRSREIALTPQDDSQASYFGRRTAADGLIDWQKSASEINNLIRAVTEPYPGAFTFLG 236
Query: 241 IGNKHERIKLLESQLVE---------GEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGR 290
++ + +++V+ G +I+ + ++C + A+ I+ Q
Sbjct: 237 ER----KVIIWRARVVKNNHVNVNHLHSDDVGSIISTSPLVVSCGEDALEIVSGQSE--- 289
Query: 291 VLDIGDFLLGCPVII--GCI 308
G ++ G + G +
Sbjct: 290 ---AGLYMSGSRLAAEMGMV 306
>gi|254383564|ref|ZP_04998914.1| methionyl-tRNA formyltransferase [Streptomyces sp. Mg1]
gi|194342459|gb|EDX23425.1| methionyl-tRNA formyltransferase [Streptomyces sp. Mg1]
Length = 240
Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 4/237 (1%)
Query: 76 FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGI 135
+ D VVAYG ++P+ L + G+ N H SLLP WRGAAP+Q +IMAGD TG
Sbjct: 1 MREIDPDCCPVVAYGALLPKSALEIPRHGWVNLHFSLLPAWRGAAPVQHSIMAGDQVTGA 60
Query: 136 AIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQ 195
+ +++ LD+GPV I + + L L+ A + MD +E L Q
Sbjct: 61 STFLIEEGLDSGPVYGHLTEEIRATDTSGDLLTRLAFAGAGLLAATMDGIEDGTLRAVAQ 120
Query: 196 IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQL 255
+G++ A KI+ + R+++ A +R +P PGAW + ++ L
Sbjct: 121 PADGLSLAPKITVEDARIDWKAPAMRADRVVRGCTPAPGAWTVF--RGERLKLISLGLVT 178
Query: 256 VEGEGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ PGE+ + + AV ++ +Q G + + D+ G + G +G
Sbjct: 179 DRTDLAPGELAPAKNSVCVGTGSHAVELLWVQPQGKKPMKGADWARGVRIAPGERLG 235
>gi|296157737|ref|ZP_06840571.1| formyl transferase domain protein [Burkholderia sp. Ch1-1]
gi|295891983|gb|EFG71767.1| formyl transferase domain protein [Burkholderia sp. Ch1-1]
Length = 311
Score = 89.6 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 66/290 (22%), Positives = 113/290 (38%), Gaps = 9/290 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNPTEN----IWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P E + + D Y ++P +L G YN H SLLP++RG
Sbjct: 57 PVMTPNDPKSPELHAAVSAARPDFIFSFYYRHMLPVELLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + + + +++V +
Sbjct: 117 VPTNWAVIHGETETGATLHEMAAKPDAGAIVAQTPVPILPDDTASQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+ L P P + +Y + R+++ + A+ V+N IR P+PGA+ +
Sbjct: 177 RVLPSLLAGEAPHLPNDISHGSYFGGRKPEDGRIDWTQPAQQVYNLIRAVAPPYPGAFTD 236
Query: 239 MMIGNKHE-RIKLLESQLVEGEGKPGEVINPNFTIA-CSQG-AVRIMRLQ 285
+ R +L + + G ++ N A C G + I L+
Sbjct: 237 LGGHRFMVARARLAAPGALRSDLPAGLHVSDNAIFAICGDGRTIAIHELR 286
>gi|295401168|ref|ZP_06811141.1| formyl transferase domain protein [Geobacillus thermoglucosidasius
C56-YS93]
gi|294976761|gb|EFG52366.1| formyl transferase domain protein [Geobacillus thermoglucosidasius
C56-YS93]
Length = 299
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 58/291 (19%), Positives = 119/291 (40%), Gaps = 15/291 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+VF+G +F+ A L+ ++ +V V T+ A+++ +P
Sbjct: 1 MRIVFIGCVKFSYAALETVIKETKAEVVGVITKNESKFNADFASLEP-----LAKKYKIP 55
Query: 62 ALV-PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
++ ++ Y+ + N DV + ++ ++IL+ KLG H + LP+ RG
Sbjct: 56 FMIAENNDQEQMYQWIKALNPDVIYCFGWSYLLNKKILDIPKLGVIGYHPTKLPKNRGRH 115
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI ++ G ET MD+ D+G + +P+ + L +L +
Sbjct: 116 PIIWTLVLGLKETASTFFFMDEGADSGDILSQEVLPVLETDDANTLYNKLISTALQQIKT 175
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEM 239
+L N PQ + Y K K + +++ SA+ ++N +R P+ GA
Sbjct: 176 FTHQLMDNTYKRIPQAHDQANYWRKRDKEDGLIDWRMSAKTIYNLVRALTKPYVGAHCLY 235
Query: 240 MIGNKHERIKLLESQLVEGEG----KPGEVIN---PNFTIACSQGAVRIMR 283
++ + E +PG+V+ + + C +G + ++
Sbjct: 236 RNREVKVWRTQIDQHCFKQEEVLPIEPGKVLKIEGKHIYVKCGEGVIILVE 286
>gi|300715793|ref|YP_003740596.1| bifunctional polymyxin resistance protein ArnA [Erwinia billingiae
Eb661]
gi|299061629|emb|CAX58744.1| Bifunctional polymyxin resistance protein ArnA [Erwinia billingiae
Eb661]
Length = 662
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 66/313 (21%), Positives = 137/313 (43%), Gaps = 21/313 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + + ALV++ + I +++T ++V + A E +P
Sbjct: 1 MKAVVFAYHDMGCIGINALVNAGYEIEAIFTHAD----SSNENHFFASVARTAAEQGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ + +V Y ++ ++L+ G +N H SLLP++RG AP
Sbjct: 57 YAPEDVNHPLWVDRIRTMAPEVIFSFYYRNLLSDQLLSIATKGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG+ + +M D G + KV IS++ N L ++L+ H + +
Sbjct: 117 LNWALVNGETETGVTLHRMVARADAGAIIAQDKVSISADDNALTLHRKLNAAAEHLLADC 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ L + Q +T + + + R+++ + AE V+N +R P+PGA+ +
Sbjct: 177 LPALRNGQISERAQDNTQVTVVGRRTPDDGRIDWSQPAEVVNNLVRAVTDPWPGAFGYVG 236
Query: 241 IGNKHERIKLLESQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDF 297
+ + + ++ K G V++ N +AC +GA+ +M Q G +
Sbjct: 237 AA----KFIIWKGKVRHDLPAAKAGTVLSVNPLVVACGEGALEVMTGQSENG------VY 286
Query: 298 LLGCPVIIGCIVG 310
+ G + +G
Sbjct: 287 MQGSQLA--QTLG 297
>gi|209519532|ref|ZP_03268325.1| formyl transferase domain protein [Burkholderia sp. H160]
gi|209500011|gb|EEA00074.1| formyl transferase domain protein [Burkholderia sp. H160]
Length = 309
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 66/293 (22%), Positives = 112/293 (38%), Gaps = 15/293 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P+ +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNPSEN----IWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P E + D Y ++P +L G YN H SLLP++RG
Sbjct: 57 AVVTPADPKSPELRAAVSAARPDFIFSFYYRHMLPPDLLAIAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G++ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGEHETGATLHEMAAKPDAGAIIAQTPVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L P P +Y + R+++ + A+ V+N IRA++P +
Sbjct: 177 RVLPALLAGEAPHLPNDLAHGSYYGGRKPEDGRIDWNQPAQQVYNLIRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQLVE-----GEGKPGEVINPNFTIA-CSQG-AVRIMRLQ 285
R + ++L + PG ++ N A C G A+ I L+
Sbjct: 234 FTDIDGRRFIVARARLAPPGALRSDLPPGLHVSDNAVFAICGDGRAINIHELR 286
>gi|74000875|ref|XP_853405.1| PREDICTED: similar to Methionyl-tRNA formyltransferase,
mitochondrial precursor (MtFMT) [Canis familiaris]
Length = 393
Score = 89.6 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 78/319 (24%), Positives = 126/319 (39%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-------HSIVSVYTQP-PRPAGRRGLKSVLSAVHKKA 55
RV+F GT FA L+AL ++ + V T P P P G V + A
Sbjct: 53 RVLFFGTDRFAREALRALHAARENKEEELIENLEVVTVPSPSPKGL--------PVKQYA 104
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV VV ++G ++ + ++ G N H S LPR
Sbjct: 105 VQSQLPVY--------EWPDVGSGEYDVGVVASFGRLLSEALILKFPYGMLNVHPSCLPR 156
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG API ++ GD TG+ IM++ D GP+ VP+ S L+ LS L
Sbjct: 157 WRGPAPIIHTVLHGDTITGVTIMQIRPKRFDVGPIIKQETVPVPSKSTAKELEAMLSKLG 216
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR------- 227
A ++ + L ++ Q G+T+A KIS G + + + +
Sbjct: 217 ADMLISVLKNLPESLSNGRQQPTEGVTHAPKISAGTSCIKWEEQTSEQIFRLYRAIGNII 276
Query: 228 -ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIM 282
+ + ++++ + L + +L PG VI + C G + +
Sbjct: 277 PLQTLWMDNTIKLLDLVEVNSSILTDPKLTGQPVIPGSVIYHKQSQILLVRCKDGWIGVR 336
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 337 SVML--KKTLTATDFYNGY 353
>gi|328713300|ref|XP_001951227.2| PREDICTED: 10-formyltetrahydrofolate dehydrogenase-like
[Acyrthosiphon pisum]
Length = 922
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 78/316 (24%), Positives = 126/316 (39%), Gaps = 33/316 (10%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L V +G S FA + L+ + H +V V+T + G R + A E + P
Sbjct: 24 LNVAIIGQSTFAAEVYKLLLKNGHRVVGVFTILDK--GNR-----QDPLAAVASENNTPV 76
Query: 63 LVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
E Q+ +A++ V+ IP ++ K H S+LP+
Sbjct: 77 FKIKSWRKGENALPEIVAQYKQVDAELNVLPFCSQFIPMEVIEHPKHKSICYHPSILPKH 136
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RG + I +M GD E G +I D LDTGP+ + P+ + L
Sbjct: 137 RGVSAINWTLMNGDKEAGFSIFWADDGLDTGPILSQKSCPVLPDDTVDSLYNRFLYPEGI 196
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGE-TRVNFCRSAENVHNHIRALSPFPG 234
+M EA+D + P+ PQ G ++ + K +V++ RS ++ N IR L PG
Sbjct: 197 KSMAEAVDMVANGTAPVIPQSTEGSSFEPSVRKKALQKVDWSRSGVDIQNFIRGLDSSPG 256
Query: 235 AWLEMMIGNKHERIKLLESQLVEGEGKPGE------------VINPNFTIACSQGA-VRI 281
AW + +KL +S + E GE V + I C+ G + I
Sbjct: 257 AWTIINETE----VKLYKSSIWTNETPTGEQVTVDTIQFPAIVHSNGLLITCNDGLKINI 312
Query: 282 MRLQRAGGRVLDIGDF 297
RL G ++ ++
Sbjct: 313 ERLSVDGK-MMAASNY 327
>gi|157109317|ref|XP_001650620.1| methionyl-tRNA formyltransferase [Aedes aegypti]
gi|108879077|gb|EAT43302.1| methionyl-tRNA formyltransferase [Aedes aegypti]
Length = 347
Score = 89.2 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 81/320 (25%), Positives = 134/320 (41%), Gaps = 28/320 (8%)
Query: 3 LRVVFMGTSEFAVATLQAL---VSSSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKAQE 57
LR++F GT F++ +L+ L + S+ + S V T K+ + + ++
Sbjct: 39 LRILFFGTDNFSLPSLKVLNESLKSNGKVSSLEVVTS---------FKAKRNPLRLYSES 89
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
LP + D+ VVV++G +IP+ +++ +LG N HASLLP+ R
Sbjct: 90 ERLPLHDWPLRRPAVG-----EDFDLGVVVSFGHLIPELLISTFRLGMLNVHASLLPKLR 144
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
GAAPI AI GD ETGI IMK+ H D G + R VPI+ ++ L +L+ + A
Sbjct: 145 GAAPIVHAIRNGDTETGITIMKIKPKHFDVGEILTQRHVPITEHMLMPELHSQLAGIGAS 204
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
++ ++ L+Q L Q TYA KI + + +
Sbjct: 205 TLLHCIENLDQYYSALKAQNSQDATYAPKIDAHFCEIRWTEMTAKQVYDMYRSLYSYKPL 264
Query: 237 LEMMIGNKHERIKL-LESQLVEGEGKPGEVINPN----FTIACSQG-AVRIMRLQRAGGR 290
+ + + KL E + G + + C G AV I +L G +
Sbjct: 265 TSRLGNDPVKIFKLSYPVTEQEAPLEIGHIQYCRRTKWLRVGCRDGSAVLIEQLSIGGKK 324
Query: 291 VLDIGDFLLGC--PVIIGCI 308
V++ +F G +
Sbjct: 325 VMNAQEFNNGFLSKLAPADR 344
>gi|323526177|ref|YP_004228330.1| formyl transferase domain-containing protein [Burkholderia sp.
CCGE1001]
gi|323383179|gb|ADX55270.1| formyl transferase domain protein [Burkholderia sp. CCGE1001]
Length = 311
Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 69/290 (23%), Positives = 114/290 (39%), Gaps = 9/290 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDSPTEN----IWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P E + D Y ++P +L G YN H SLLP++RG
Sbjct: 57 PVVTPADPTSPELRAAVSAARPDFIFSFYYRHMLPVDLLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLHGETETGATLHEMAAKPDAGAIIAQTPVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+ L P P + +Y + R+++ + A+ V+N IR P+PGA+ +
Sbjct: 177 RVLPALLAGEAPHLPNDLSHGSYYGGRKPEDGRIDWTQPAQQVYNLIRAVAPPYPGAFTD 236
Query: 239 MMIGNKHE-RIKLLESQLVEGEGKPGEVINPNFTIA-CSQG-AVRIMRLQ 285
+ R +L + + PG ++ N A C G A+ I L+
Sbjct: 237 IGGRRFVVARARLATPGALRSDLPPGLHVSDNAVFAICGDGRAIAIHELR 286
>gi|260784711|ref|XP_002587408.1| hypothetical protein BRAFLDRAFT_290865 [Branchiostoma floridae]
gi|229272554|gb|EEN43419.1| hypothetical protein BRAFLDRAFT_290865 [Branchiostoma floridae]
Length = 936
Score = 89.2 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 121/311 (38%), Gaps = 24/311 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++ +G S+F L H IV V+T P L+ + ++ +P
Sbjct: 32 KMKIAVIGQSQFGTEVYNLLKKEGHEIVGVFTIPD-------LQGKPDPLAVAGEKDGVP 84
Query: 62 ALVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + +Q+ + AD+ V+ IP ++N K G H S+LPR
Sbjct: 85 TFKFPRWRVKGQSIPEVVQQYQACGADLNVLPFCSQFIPMDVINTPKHGSIIYHPSILPR 144
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G I D LDTGP+ ++ N GL +
Sbjct: 145 HRGASAINWTLIHGDKKAGFTIFWADDGLDTGPILLQKECYAGPNETLDGLYNKFLYPEG 204
Query: 175 AHAMVEAMDKLEQNNLPLSPQIEN-GITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
AM EA+ + P PQ E+ K ++N+ ++ E +HN IR P
Sbjct: 205 IKAMAEAVQLIADGKAPRIPQSEDGATYEPMLKKKESVQINWDQTGEALHNFIRGNDKLP 264
Query: 234 GAWLEMMIGNKHER-IKLLESQLVEGE-------GKPGEVINPNFTIACSQG-AVRIMRL 284
GAW + K+ + ++ EG KP V + G + + L
Sbjct: 265 GAWTTINGEQVTLYGSKMFKKEVPEGTEVEVPGASKPAIVHKGGMIFTGNDGKMLNVKNL 324
Query: 285 QRAGGRVLDIG 295
Q A G ++
Sbjct: 325 QFADGSMIPAK 335
>gi|302844139|ref|XP_002953610.1| hypothetical protein VOLCADRAFT_106047 [Volvox carteri f.
nagariensis]
gi|300261019|gb|EFJ45234.1| hypothetical protein VOLCADRAFT_106047 [Volvox carteri f.
nagariensis]
Length = 415
Score = 88.8 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 45/344 (13%)
Query: 4 RVVFMGTSEFAVATLQALV------SSSHSIVSVYTQPPRPAGRRGLKS-VLSAVHKKAQ 56
RVVF+GT E A LQ L+ ++ + V +QP +P GR + S V A+
Sbjct: 46 RVVFLGTPEVAAGVLQDLLSAAQKPDAAFEVALVVSQPGKPKGRGNRAVAIPSPVEALAR 105
Query: 57 EFSL-----PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
+ L ++ + D+A+ AYG ++PQR L+ K G N H S
Sbjct: 106 DSGLLGPDQILCPARAREEDFLRRLEELQPDLAITAAYGNMLPQRFLDIPKYGTLNVHPS 165
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LLP++RGAAP+QRA+ G NETG+++ D GPV ++VP+ + L Q L
Sbjct: 166 LLPKYRGAAPVQRALEDGVNETGVSVAYTVLACDAGPVLVQQRVPVDQDDTAPELLQRLF 225
Query: 172 VLCAHAMVEAMDKLEQNNLPLS--PQIENGITYAEKISKGETRVNFCRSA-ENVHNHIRA 228
L +++ + + P PQ E+ + +A K+S+ E+ ++F + +HN +RA
Sbjct: 226 QLGGQLLLQRLPDVWAGRGPQIAVPQDESQVLHAAKLSRDESVLDFSSTQGHVLHNRVRA 285
Query: 229 LSPFPGAWLEMMIGN------KHERIKLLESQLVEGEG-----------KPGE------- 264
+ +PG ++ + + IK+++++ P
Sbjct: 286 FAGWPGTSATFLLQDEASGETEAVDIKIVKTRASPPAAASEAAYSWSWPAPASGGAEGGS 345
Query: 265 -----VINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLLGCP 302
+ + C+ G + + ++Q +V+ + DF G
Sbjct: 346 AAAVVFSGDSMLVPCAGGTWLEVWQVQPPTKKVMSVKDFRNGLR 389
>gi|295676435|ref|YP_003604959.1| formyl transferase domain protein [Burkholderia sp. CCGE1002]
gi|295436278|gb|ADG15448.1| formyl transferase domain protein [Burkholderia sp. CCGE1002]
Length = 309
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 67/293 (22%), Positives = 114/293 (38%), Gaps = 15/293 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P+ +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNPSEN----IWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P E + D Y ++P +L G YN H SLLP++RG
Sbjct: 57 AVVTPADPRSPELRAAVSAARPDFIFSFYYRHMLPLDLLAIAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G++ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGESETGATLHEMAAKPDAGAIIAQTPVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L P P + +Y + R+++ +SA+ V+N IRA++P +
Sbjct: 177 RVLPALLAGEAPHLPNDLSHGSYYGGRKPEDGRIDWSQSAQQVYNLIRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQLV-----EGEGKPGEVINPNFTIA-CSQG-AVRIMRLQ 285
R + ++L + PG ++ N A C G A+ I L+
Sbjct: 234 FTDLNGRRFIIARARLAVPGALRSDLPPGLHVSDNAVFAICGDGRAINIHELR 286
>gi|296425253|ref|XP_002842157.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638416|emb|CAZ86348.1| unnamed protein product [Tuber melanosporum]
Length = 399
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/333 (18%), Positives = 117/333 (35%), Gaps = 35/333 (10%)
Query: 2 TLRVVFMGTSEFAVATLQALVS----SSHSI--VSVYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ F+ +L+AL + + I + V T + +GR V A
Sbjct: 53 PLRILFCGSDHFSATSLKALHNEHLSNGDLIRSIDVLTLGDKRSGRGMKTIREVPVKSLA 112
Query: 56 QEFSLPALVPTKLGQEEY--EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ SLP + + ++ + V++G+ IP R++ K G N H SLL
Sbjct: 113 ESLSLPRHEIYNFESDWNLPDNIFGEKINMLIAVSFGIFIPARLIMDAKYGGLNVHPSLL 172
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
P +RGAAPI ++ TG+++ + ++ P + Q L
Sbjct: 173 PMYRGAAPIYHTLLDQQPITGVSVQTLHPVKFDHGAILLQTNPPINVPPKTRYQALHDTL 232
Query: 174 CAHAMVEAMDKLEQ--NNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
+H ++ L + PL P + E ++N
Sbjct: 233 ASHGAELLVETLRRGLFFPPLDPVENDYKPSLAPKIDPEIHARIDWKSQNAEEIESRCGT 292
Query: 232 FPGAWLEMMIGNKHERIK----------LLESQLVEGEGK---PGEV----------INP 268
W ++ + E + + E +E +GK PG +
Sbjct: 293 LNTVWCKLSSIEEPELERRKRAILSGVSVFECPEMERKGKVVRPGTFRHLTVRNGEDLYE 352
Query: 269 NFTIAC--SQGAVRIMRLQRAGGRVLDIGDFLL 299
+ C G + ++ G R++ G++
Sbjct: 353 TMIVKCKKGGGWISAEGIKIEGKRLVSAGEWAR 385
>gi|291619557|ref|YP_003522299.1| ArnA [Pantoea ananatis LMG 20103]
gi|291154587|gb|ADD79171.1| ArnA [Pantoea ananatis LMG 20103]
Length = 660
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 71/309 (22%), Positives = 137/309 (44%), Gaps = 23/309 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ--EFSL 60
++ + + A + AL+ + +I ++YT + A E S+
Sbjct: 1 MKTIVFAYHDMGCAGINALLKAGFTISAIYTHADTASENHFFWLSG------ANRGENSI 54
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P ++ S DV Y ++ +ILN+ K G +N H SLLP++RG
Sbjct: 55 PVYAPDEVNHPLWIDRIKSAEPDVIFSFYYRNLLSDQILNSAKQGAFNLHGSLLPKYRGR 114
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G+ ETG+ + +M K D G + ++V I+ N L ++L + +
Sbjct: 115 APLNWALVNGETETGVTLHRMVKKADAGDIIAQQRVAIADEDNALTLHRKLVDCASALLE 174
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
A+ ++Q N+ +PQ E T + + + R+N+ A ++N +R P+PGA+
Sbjct: 175 SALPAMKQGNIVGTPQNEADATVVGRRTPEDGRINWALPASQINNLVRAVTDPWPGAFAF 234
Query: 239 MMIGNKHERIKLLESQL--VEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIG 295
+ + ++++ +PG V++ F +AC +GA+ I Q A
Sbjct: 235 AGTT----KFVVWKAKVLSTPHNVRPGTVLSAEPFVVACGEGALEIQTGQTAN------S 284
Query: 296 DFLLGCPVI 304
++ G +
Sbjct: 285 VYMNGVQLA 293
>gi|238757770|ref|ZP_04618953.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia aldovae ATCC 35236]
gi|238704013|gb|EEP96547.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia aldovae ATCC 35236]
Length = 652
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 74/291 (25%), Positives = 136/291 (46%), Gaps = 19/291 (6%)
Query: 19 QALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL-VPTKLGQEEYEQFL 77
+ALV + + I +V+T P R S+V + A + LP E+
Sbjct: 2 KALVEAGYDIQAVFTHTDAPGENR----FFSSVARVAADLELPVHAPEDVNHPLWVERIR 57
Query: 78 SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAI 137
D+ Y ++ IL+ G +N H SLLP++RG API A++ G+ ETG+ +
Sbjct: 58 QLQPDIIFSFYYRNMLSDEILSLAPQGGFNLHGSLLPKYRGRAPINWALVNGETETGVTL 117
Query: 138 MKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIE 197
+M + D G + KV IS L ++ +V+ + +++ +L L+PQ E
Sbjct: 118 HQMVRKADAGSIVGQHKVAISPTDTALTLHAKVRDAAKELLVDLLPEMKGKSLRLTPQKE 177
Query: 198 NGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIGNKHERIKLLESQLV 256
+Y + + + +++ +SA ++N +R P+PGA+ + ++ + S+ +
Sbjct: 178 ADASYFGRRTAADGEIHWHKSASAINNLVRAVTEPYPGAFSYLG----QRKLTIWRSRPL 233
Query: 257 E-GEGK-PGEVINP-NFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVI 304
GK PG V++ T+AC +GA+ I+ Q G D ++ G +
Sbjct: 234 NMEHGKLPGTVLSILPLTVACGEGALEIIAGQ--G----DADLYVQGNRLA 278
>gi|27923969|sp|Q9D799|FMT_MOUSE RecName: Full=Methionyl-tRNA formyltransferase, mitochondrial;
Short=MtFMT; Flags: Precursor
gi|18044142|gb|AAH19509.1| Mitochondrial methionyl-tRNA formyltransferase [Mus musculus]
Length = 386
Score = 88.4 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 77/319 (24%), Positives = 128/319 (40%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-------HSIVSVYTQPP-RPAGRRGLKSVLSAVHKKA 55
RV+F+GT FA TL+AL ++ + V T P P G V + A
Sbjct: 44 RVLFLGTDHFARETLRALHAARDGKEEKLIEKLEVVTVPSLSPKGL--------PVKQYA 95
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV VV ++G ++ + ++ G N H S LPR
Sbjct: 96 IQSQLPVY--------EWPDVGSGEYDVGVVASFGRLLSEALILKFPYGILNVHPSCLPR 147
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG API ++ GD TG+ IM++ D GP+ +P+ + L+ LS L
Sbjct: 148 WRGPAPIIHTVLHGDTVTGVTIMQIRPKRFDIGPILQQETIPVPPKSTSKELEAVLSKLG 207
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP--- 231
A+ ++ + L ++ PQ G+TYA K+S G + V + +
Sbjct: 208 ANMLISVLKNLPESLNNGRPQPAEGVTYAPKVSAGTSCVKWEEQTSEQVLRLHLAIGDIV 267
Query: 232 -----FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIM 282
+ ++++ + L + +L PG V+ + C G + +
Sbjct: 268 PLQTLWMENTVKLLDLVEVNNSILADPKLTGQTVTPGSVVYHRPSQMLLVRCKDGWIGVR 327
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 328 SVML--KKTLTATDFYNGY 344
>gi|170692305|ref|ZP_02883468.1| formyl transferase domain protein [Burkholderia graminis C4D1M]
gi|170142735|gb|EDT10900.1| formyl transferase domain protein [Burkholderia graminis C4D1M]
Length = 311
Score = 88.0 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 69/290 (23%), Positives = 114/290 (39%), Gaps = 9/290 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDSPTEN----IWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P E + D Y ++P +L G YN H SLLP++RG
Sbjct: 57 PVVTPADPKSPELRAAVSAARPDFIFSFYYRHMLPVDVLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLHGETETGATLHEMAAKPDAGAIVAQTPVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+ L P P + +Y + R+++ + A+ V+N IR P+PGA+ +
Sbjct: 177 RVLPALLAGEAPHLPNDLSHGSYYGGRKPEDGRIDWSQPAQQVYNLIRAVAPPYPGAFTD 236
Query: 239 MMIGNKHE-RIKLLESQLVEGEGKPGEVINPNFTIA-CSQG-AVRIMRLQ 285
+ R +L + + PG ++ N A C G A+ I L+
Sbjct: 237 VGGRRFVVARARLATPGALRPDLPPGLHVSDNAVFAICGDGRAIAIHELR 286
>gi|157423296|gb|AAI53526.1| Zgc:152651 protein [Danio rerio]
Length = 390
Score = 88.0 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 71/316 (22%), Positives = 128/316 (40%), Gaps = 38/316 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLS-----AVHKKAQEF 58
R++F G+ +FA+ +L+ L ++ AG V++ V K A++
Sbjct: 54 RILFFGSDDFALESLKRLH---------LSRNDNKAGVVDALEVVTLSRDAPVRKYAEQH 104
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP + +S + DV VVV++G +I + I+N G N H SLLPRWRG
Sbjct: 105 RLPLH-------HWPDVDMSTHFDVGVVVSFGSLIKENIINKMPYGILNVHPSLLPRWRG 157
Query: 119 AAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
+API I+ GD+ TG+ IM++ D GP+ I N L L+ + +
Sbjct: 158 SAPIFHTILNGDSVTGVTIMQIRPKRFDVGPILQQEVYEIPKNCTAEELGATLADMGSRM 217
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR--------AL 229
+++ + L + Q + G + A KIS + + + + + +
Sbjct: 218 LMDTLTNLPERIANRKEQPKEGASLAPKISSTMAWIIWEEHSCDYIDRLFRAIGFRIPLR 277
Query: 230 SPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQ 285
+ + G ++++ +R + PG + + + C G V +
Sbjct: 278 TMWMGNSIKLLDY-VGKRCVSFTASPF-LSTVPGTLHYQKESNTLLVRCKDGWVGFKTVM 335
Query: 286 RAGGRVLDIGDFLLGC 301
+ L DF G
Sbjct: 336 F--KKRLSATDFFNGY 349
>gi|126277371|ref|XP_001375318.1| PREDICTED: similar to mitochondrial methionyl-tRNA
formyltransferase, [Monodelphis domestica]
Length = 524
Score = 87.6 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 78/319 (24%), Positives = 124/319 (38%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALV---SSSHSIVS----VYTQP-PRPAGRRGLKSVLSAVHKKA 55
RV+F GT FA L+AL + + V T P P G V A
Sbjct: 61 RVLFFGTDNFAQEALRALNVARENKGEQLLENIEVVTVPSSSPKGL--------PVKNYA 112
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
LP E+ S DV VV ++G ++ ++++ G N H S LPR
Sbjct: 113 LHAQLPVH--------EWPDVGSGEFDVGVVASFGRLLSKKLILKFPYGILNVHPSYLPR 164
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG API ++ GD TG+ IM++ D GP+ P+ L+ LS L
Sbjct: 165 WRGPAPIVHTVLHGDTVTGVTIMQIKPKRFDVGPIIKQEAFPVPPQCTAKELEILLSRLG 224
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
A+ ++ + L ++ Q G+TYA KIS + V + ++
Sbjct: 225 ANMLISVLRNLPESLKNERQQPAEGVTYAPKISVAMSCVKWEEQTPEEILRLQRAIGSMI 284
Query: 235 AWLEMMIGNKHERIKLLES--------QLVEGEGKPGEVI----NPNFTIACSQGAVRIM 282
+ +GN + + L+E+ +L PG +I + + C G + +
Sbjct: 285 PLQTLWMGNTIKLLDLVEANSPGLADQKLTGQSALPGTIIYHKQSQTLLVCCKGGWIGVR 344
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 345 SIIF--KKKLTATDFYNGY 361
>gi|302527651|ref|ZP_07279993.1| methionyl-tRNA formyltransferase [Streptomyces sp. AA4]
gi|302436546|gb|EFL08362.1| methionyl-tRNA formyltransferase [Streptomyces sp. AA4]
Length = 315
Score = 87.2 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 67/309 (21%), Positives = 125/309 (40%), Gaps = 18/309 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV G + TL+AL+ + + V T PP + +V A+E +
Sbjct: 1 MRVAMFGYQTWGHRTLKALLDARQDVRLVVTHPPSDHAY--ERIWSDSVADLAEEHGIRT 58
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L+ + E + L D+ V + +P I N + G N H SLLP + G +P
Sbjct: 59 LLRARPDDAELLEELKSADLDLIVANNWRTWLPPEIFNLPRHGTLNVHDSLLPAYAGFSP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G+ E G+ M+ LD G + R V + L L + EA
Sbjct: 119 IIWALINGEPEVGVTAHMMNDELDAGDIVAQRAVTVGPRDTATDLFHRTVDLIEPLVTEA 178
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +E + Q ++ K + ++ +++ SAE + +RA +
Sbjct: 179 LGLIESGTVVPIAQDRTKASFFHKRAPRDSLIDWTWSAEELDRLVRAQ---SDPYPNAFT 235
Query: 242 GNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAGG 289
++ E+++++ + + +G G PG + I + A +RI R++ A
Sbjct: 236 YHRGEQLRIVRASVSDGHYGGTPGRIFIREGEGVVIVAGREARRGQSPGLRIERVRTADD 295
Query: 290 RVLDIGDFL 298
R L ++
Sbjct: 296 RELPAAEYF 304
>gi|295094724|emb|CBK83815.1| Methionyl-tRNA formyltransferase [Coprococcus sp. ART55/1]
Length = 173
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLES 253
PQ ++ YA ++KG ++F AE + +R L P+P A+ + N +K+ +
Sbjct: 57 PQDDSLSCYASMLNKGMGDIDFSEPAEKIERLVRGLQPWPCAYTRIGGKN----VKIYGA 112
Query: 254 QLV--EGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGC 307
++V E PGE+ F IAC Q A++I RLQ G + +D FL G + G
Sbjct: 113 KVVSREDGIAPGEITMVTKKTFAIACGQDALQITRLQPEGKKPMDAVAFLAGNKLTAGE 171
>gi|114657617|ref|XP_510478.2| PREDICTED: methionyl-tRNA formyltransferase, mitochondrial isoform
2 [Pan troglodytes]
Length = 389
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 77/319 (24%), Positives = 126/319 (39%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-------HSIVSVYTQP-PRPAGRRGLKSVLSAVHKKA 55
RV+F GT +FA L+AL ++ + V T P P P G V + A
Sbjct: 49 RVLFFGTDQFAREALRALHAARENKEEELIDKLEVVTMPSPSPKGL--------PVKQYA 100
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV VV ++G ++ + ++ G N H S LPR
Sbjct: 101 VQSQLPVY--------EWPDVGSGEYDVGVVASFGRLLNESLILKFPYGILNVHPSCLPR 152
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG AP+ ++ GD TG+ IM++ D GP+ VP+ L+ LS L
Sbjct: 153 WRGPAPVIHTVLHGDTVTGVTIMQIRPKRFDVGPILKQETVPVPPKSTAKELEAVLSRLG 212
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR------- 227
A+ ++ + L ++ Q G TYA KIS G + + + +
Sbjct: 213 ANMLISVLKNLPESLSNGRQQPMEGATYAPKISAGTSCIKWEEQTSEQIFRLYRAIGNII 272
Query: 228 -ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIM 282
+ + ++++ + L + +L PG VI + C G + +
Sbjct: 273 PLQTLWMANTIKLLDLVEVNSSVLADPKLTGQALIPGSVIYHKQSQILLVYCKDGWIGVR 332
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 333 SVML--KKSLTATDFYNGY 349
>gi|158749622|ref|NP_001071010.2| methionyl-tRNA formyltransferase, mitochondrial [Danio rerio]
gi|148744673|gb|AAI42769.1| Zgc:152651 protein [Danio rerio]
Length = 390
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 71/316 (22%), Positives = 128/316 (40%), Gaps = 38/316 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLS-----AVHKKAQEF 58
R++F G+ +FA+ +L+ L ++ AG V++ V K A++
Sbjct: 54 RILFFGSDDFALESLKLLH---------LSRNDNKAGVVDALEVVTLSRDAPVRKYAEQH 104
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP + +S + DV VVV++G +I + I+N G N H SLLPRWRG
Sbjct: 105 RLPLH-------HWPDVDMSTHFDVGVVVSFGSLIKENIINKMPYGILNVHPSLLPRWRG 157
Query: 119 AAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
+API I+ GD+ TG+ IM++ D GP+ I N L L+ + +
Sbjct: 158 SAPIFHTILNGDSVTGVTIMQIRPKRFDVGPILQQEVYEIPKNCTAEELGATLADMGSRM 217
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR--------AL 229
+++ + L + Q + G + A KIS + + + + + +
Sbjct: 218 LMDTLTNLPERIANRKEQPKEGASLAPKISSTMAWIIWEEHSCDYIDRLFRAIGFRIPLR 277
Query: 230 SPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQ 285
+ + G ++++ +R + PG + + + C G V +
Sbjct: 278 TMWMGNPIKLLDY-VGKRCVSFTASPF-LSTVPGTLHYQKESNTLLVRCKDGWVGFKTVM 335
Query: 286 RAGGRVLDIGDFLLGC 301
+ L DF G
Sbjct: 336 F--KKRLSATDFFNGY 349
>gi|119598112|gb|EAW77706.1| mitochondrial methionyl-tRNA formyltransferase, isoform CRA_a [Homo
sapiens]
Length = 389
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 77/319 (24%), Positives = 126/319 (39%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-------HSIVSVYTQP-PRPAGRRGLKSVLSAVHKKA 55
RV+F GT +FA L+AL ++ + V T P P P G V + A
Sbjct: 49 RVLFFGTDQFAREALRALHAARENKEEELIDKLEVVTMPSPSPKGL--------PVKQYA 100
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV VV ++G ++ + ++ G N H S LPR
Sbjct: 101 VQSQLPVY--------EWPDVGSGEYDVGVVASFGRLLNEALILKFPYGILNVHPSCLPR 152
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG AP+ ++ GD TG+ IM++ D GP+ VP+ L+ LS L
Sbjct: 153 WRGPAPVIHTVLHGDTVTGVTIMQIRPKRFDVGPILKQETVPVPPKSTAKELEAVLSRLG 212
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR------- 227
A+ ++ + L ++ Q G TYA KIS G + + + +
Sbjct: 213 ANMLISVLKNLPESLSNGRQQPMEGATYAPKISAGTSCIKWEEQTSEQIFRLYRAIGNII 272
Query: 228 -ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIM 282
+ + ++++ + L + +L PG VI + C G + +
Sbjct: 273 PLQTLWMANTIKLLDLVEVNSSVLADPKLTGQALIPGSVIYHKQSQILLVYCKDGWIGVR 332
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 333 SVML--KKSLTATDFYNGY 349
>gi|164663775|ref|NP_640335.2| methionyl-tRNA formyltransferase, mitochondrial precursor [Homo
sapiens]
gi|27923776|sp|Q96DP5|FMT_HUMAN RecName: Full=Methionyl-tRNA formyltransferase, mitochondrial;
Short=MtFMT; Flags: Precursor
gi|307686427|dbj|BAJ21144.1| mitochondrial methionyl-tRNA formyltransferase [synthetic
construct]
Length = 389
Score = 86.9 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 77/319 (24%), Positives = 126/319 (39%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-------HSIVSVYTQP-PRPAGRRGLKSVLSAVHKKA 55
RV+F GT +FA L+AL ++ + V T P P P G V + A
Sbjct: 49 RVLFFGTDQFAREALRALHAARENKEEELIDKLEVVTMPSPSPKGL--------PVKQYA 100
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV VV ++G ++ + ++ G N H S LPR
Sbjct: 101 VQSQLPVY--------EWPDVGSGEYDVGVVASFGRLLNEALILKFPYGILNVHPSCLPR 152
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG AP+ ++ GD TG+ IM++ D GP+ VP+ L+ LS L
Sbjct: 153 WRGPAPVIHTVLHGDTVTGVTIMQIRPKRFDVGPILKQETVPVPPKSTAKELEAVLSRLG 212
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR------- 227
A+ ++ + L ++ Q G TYA KIS G + + + +
Sbjct: 213 ANMLISVLKNLPESLSNGRQQPMEGATYAPKISAGTSCIKWEEQTSEQIFRLYRAIGNII 272
Query: 228 -ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIM 282
+ + ++++ + L + +L PG VI + C G + +
Sbjct: 273 PLQTLWMANTIKLLDLVEVNSSVLADPKLTGQALIPGSVIYHKQSQILLVYCKDGWIGVR 332
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 333 SVML--KKSLTATDFYNGY 349
>gi|290984617|ref|XP_002675023.1| predicted protein [Naegleria gruberi]
gi|284088617|gb|EFC42279.1| predicted protein [Naegleria gruberi]
Length = 743
Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 64/343 (18%), Positives = 124/343 (36%), Gaps = 45/343 (13%)
Query: 4 RVVFMGTSEFAVATLQALVS-----SSHSIVSVYTQPPRPAGRRGL-KSVLSAVHKKAQE 57
R++F G+ F++ TL+ L S + + V P R RR + V E
Sbjct: 393 RILFFGSDSFSLETLKLLHSEFVKTNEAD-LCVLCPPDRKTIRRNQAEYKECIVKNYCME 451
Query: 58 FSLPALVPTKLGQEEYEQFLSFNAD-----------------------------VAVVVA 88
++ P + + E+ D + +
Sbjct: 452 NNIDYFHPIETEKSPEERKKIQRLDITDIPREERLFGGNQDNFTPSFDVGVVVSFSYFLQ 511
Query: 89 YGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKH-LDTG 147
GL+ + + +N H SLLPR+RG API A++ GD+ETG+ IM++D D G
Sbjct: 512 KGLLDQFKTRDGQHSTIFNIHPSLLPRYRGPAPIHHALLNGDSETGVTIMELDDKEFDIG 571
Query: 148 PVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKIS 207
+ +K I L L+V A M++ + + + + +T +
Sbjct: 572 NIVKQQKFNIEKTETFTQLHDRLAVRGAEMMIDTIRACNFDFTKVQRINQENLTKTIAAT 631
Query: 208 KGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLE-----SQLVEGEGKP 262
+ + ++ + A ++ + ++ +I L + E
Sbjct: 632 RAKKVNFAIGEISLKDENVFTIYNKWRALEKIHVPFQNTKILLKQLDYPVIDSSEDNTPI 691
Query: 263 GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
G + + + ++ C G ++I LQ + + DF+ G
Sbjct: 692 GTLYIDSDKSLSLKCVGGKLKIKALQMENKKEMSANDFINGNR 734
>gi|149067348|gb|EDM17081.1| aldehyde dehydrogenase 1 family, member L2 (predicted) [Rattus
norvegicus]
Length = 630
Score = 86.5 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 64/307 (20%), Positives = 110/307 (35%), Gaps = 19/307 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L+ H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSHLLKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ + A +V ++ + H S++ + +
Sbjct: 75 VFKFPRWRVKGKTIKEVAEAYQSVGAELNVLPFCTQFIPMDIIDSPEHGSII--YHPSLL 132
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCAHAMVE 180
++ ++ GD + G ++ D LDTGP+ R + N L AMVE
Sbjct: 133 PRQTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVKPNDTVDSLYNRFLFPEGIKAMVE 192
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
A+ + P +PQ E G TY K + + + AE +HN IR PGAW E+
Sbjct: 193 AVQLIADGKAPRTPQPEEGATYEGIQKKENAEIPWDQPAEVLHNWIRGHDKVPGAWAEID 252
Query: 241 IGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQRAGGRV 291
L E + G KPG V + + G A+ + LQ G++
Sbjct: 253 GQMVTFYGSSLLTSSVPAGEPLDIRGAKKPGLVTKNGLVLFGNDGKALMVRNLQFEDGKM 312
Query: 292 LDIGDFL 298
+ +
Sbjct: 313 IPASQYF 319
>gi|227499995|ref|NP_081410.2| methionyl-tRNA formyltransferase, mitochondrial precursor [Mus
musculus]
Length = 386
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 77/319 (24%), Positives = 128/319 (40%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-------HSIVSVYTQPP-RPAGRRGLKSVLSAVHKKA 55
RV+F+GT FA TL+AL ++ + V T P P G V + A
Sbjct: 44 RVLFLGTDHFARETLRALHAARDGKEEKLIEKLEVVTVPSLSPKGL--------PVKQYA 95
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV VV ++G ++ + ++ G N H S LPR
Sbjct: 96 IQSQLPVY--------EWPDVGSGEYDVGVVASFGRLLSEALILKFPYGILNVHPSCLPR 147
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG API ++ GD TG+ IM++ D GP+ +P+ + L+ LS L
Sbjct: 148 WRGPAPIIHTVLHGDTVTGVTIMQIRPKRFDIGPILQQETIPVPPKSTSKELEAVLSKLG 207
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP--- 231
A+ ++ + L ++ PQ G+TYA K+S G + V + +
Sbjct: 208 ANMLISVLKNLPESLNNGRPQPAEGVTYAPKVSAGTSCVKWEEQTSEQVLRLHLAIGDIV 267
Query: 232 -----FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIM 282
+ ++++ + L + +L PG V+ + C G + +
Sbjct: 268 PLQTLWMENTVKLLDLVEVNNSILADPKLTGQTVTPGFVVYHRPSQMLLVRCKDGWIGVR 327
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 328 SVML--KKTLTATDFYNGY 344
>gi|296213468|ref|XP_002753284.1| PREDICTED: methionyl-tRNA formyltransferase, mitochondrial
[Callithrix jacchus]
Length = 389
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 76/319 (23%), Positives = 122/319 (38%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-------HSIVSVYTQP-PRPAGRRGLKSVLSAVHKKA 55
RV+F GT +FA L+ L ++ + V T P P P G V + A
Sbjct: 49 RVLFFGTDQFAREALRFLHAARENKEEELIDRLEVVTMPSPSPKGL--------PVKQYA 100
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV VV ++G ++ + ++ G N H S LPR
Sbjct: 101 VQSQLPVH--------EWPDVGSGEYDVGVVASFGQLLSEALILKFPYGILNVHPSCLPR 152
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG API ++ GD G+ IM++ D GP+ VP+ L+ LS L
Sbjct: 153 WRGPAPIIHTVLHGDPVAGVTIMQIRPKRFDVGPILKQETVPVPPKSTAKELEAVLSRLG 212
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR------- 227
A ++ + L ++ Q G TYA KIS G + + +
Sbjct: 213 ADMLISVLKNLPESLNNGRQQPTEGATYAPKISAGTGCIKWEEQTAEQILRLHRAIGNII 272
Query: 228 -ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIM 282
+ + ++++ + L + +L PG VI + C G + +
Sbjct: 273 PLQTLWMANTIKLLDLVEVNSSILADPELTAQALIPGSVIYHRRLQILLVCCKDGWIGVR 332
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 333 SVML--RKTLTAADFYNGY 349
>gi|74225709|dbj|BAE21684.1| unnamed protein product [Mus musculus]
Length = 386
Score = 86.5 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 77/319 (24%), Positives = 128/319 (40%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-------HSIVSVYTQPP-RPAGRRGLKSVLSAVHKKA 55
RV+F+GT FA TL+AL ++ + V T P P G V + A
Sbjct: 44 RVLFLGTDHFARETLRALHAARDGKEEKLIEKLEVVTVPSLSPKGL--------PVKQYA 95
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV VV ++G ++ + ++ G N H S LPR
Sbjct: 96 IQSQLPVY--------EWPDVGSGEYDVGVVASFGRLLSEALILKFPYGILNVHPSCLPR 147
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG API ++ GD TG+ IM++ D GP+ +P+ + L+ LS L
Sbjct: 148 WRGPAPIIHTVLHGDTVTGVTIMQIRPKRFDIGPILQQETIPVPPKSTSKELEAVLSKLG 207
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP--- 231
A+ ++ + L ++ PQ G+TYA K+S G + V + +
Sbjct: 208 ANMLISGLKNLPESLNNGRPQPAEGVTYAPKVSAGTSCVKWEEQTSEQVLRLHLAIGDIV 267
Query: 232 -----FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIM 282
+ ++++ + L + +L PG V+ + C G + +
Sbjct: 268 PLQTLWMENTVKLLDLVEVNNSILADPKLTGQTVTPGFVVYHRPSQMLLVRCKDGWIGVR 327
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 328 SVML--KKTLTATDFYNGY 344
>gi|12844221|dbj|BAB26282.1| unnamed protein product [Mus musculus]
Length = 386
Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 77/319 (24%), Positives = 128/319 (40%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-------HSIVSVYTQPP-RPAGRRGLKSVLSAVHKKA 55
RV+F+GT FA TL+AL ++ + V T P P G V + A
Sbjct: 44 RVLFLGTDHFARETLRALHAARDGKEEKLIEKLEVVTVPSLSPKGL--------PVKQYA 95
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV VV ++G ++ + ++ G N H S LPR
Sbjct: 96 IQSQLPVY--------EWPDVGSGEYDVGVVASFGRLLSEALILKFPYGILNVHPSCLPR 147
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG API ++ GD TG+ IM++ D GP+ +P+ + L+ LS L
Sbjct: 148 WRGPAPIIHTVLHGDTVTGVTIMQIRPKRFDIGPILQQETIPVPPKSTSKELEAVLSKLG 207
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP--- 231
A+ ++ + L ++ PQ G+TYA K+S G + V + +
Sbjct: 208 ANMLISVLKNLPESLNNGRPQPAEGVTYAPKVSAGTSCVKWEEQTSEQVLRLHLAIGDIV 267
Query: 232 -----FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIM 282
+ ++++ + L + +L PG V+ + C G + +
Sbjct: 268 PLQTLWMENTVKLLDLVEVNNSILADPKLTGQTVTPGFVVYHRPSQMLLVRCKDGWIGVR 327
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 328 SVML--KKTLTATDFYNGY 344
>gi|315637629|ref|ZP_07892835.1| methionyl-tRNA formyltransferase [Arcobacter butzleri JV22]
gi|315478083|gb|EFU68810.1| methionyl-tRNA formyltransferase [Arcobacter butzleri JV22]
Length = 210
Score = 86.1 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF-- 58
M +V+FMGT +A + L+SS++ ++ ++TQP +P G R + + +
Sbjct: 1 MGKKVLFMGTPSYATEIFKKLLSSNYEVIGLFTQPDKPVG-RKQVLTPPDIKQFCIDNSI 59
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
++P P KL + ++ N HASLLP++RG
Sbjct: 60 NIPIFQPEKLRDNLAAYLVIKELKPDFIIVAAYGQILPKEILKLAPCINLHASLLPKYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNI 161
A+PIQ +++ DN TG+ M M++ LD+G + ++ + I+ +
Sbjct: 120 ASPIQESLLNDDNFTGVTSMFMEEGLDSGDILALQYLKITPTM 162
>gi|83814582|ref|YP_444746.1| formyltransferase, putative [Salinibacter ruber DSM 13855]
gi|83755976|gb|ABC44089.1| formyltransferase, putative [Salinibacter ruber DSM 13855]
Length = 298
Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 62/293 (21%), Positives = 121/293 (41%), Gaps = 21/293 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R+V++G E + L+ ++ +V + T+ A++ +P
Sbjct: 1 MRIVYIGCVESSQRMLRQVLQIPKGEVVGIVTRRSSSFNADFASLEP-----LAEKNDIP 55
Query: 62 ALVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ T Q + +V + ++ +L+ +LGF H + LPR RG
Sbjct: 56 CYIDTDNNQTDLASWIQERRPEVGYCFGWSYLLNPEVLSIPELGFIGFHPTKLPRNRGRH 115
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ A+ G ET + MD+ DTG + R VPI + L L + + +
Sbjct: 116 PVIWALALGLEETASSFFFMDEGADTGDLLSQRDVPIRWEDDARSLYDRLMDVAKEQISD 175
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEM 239
KL +PQ + Y K S+ + +++ S+ +V+N +R P+PGA +
Sbjct: 176 FTPKLAAREHSGNPQDDEKANYWRKRSREDGEIDWRMSSSSVYNLVRALTHPYPGAHCTV 235
Query: 240 MIGNKHERIKLLESQLVEG------EGKPGEVI---NPNFTIACSQGAVRIMR 283
+K+ + +V+G +PG+V+ + + C +G ++I
Sbjct: 236 NGRE----VKIWSADVVDGEFGNIENLEPGKVLASDDERVVVKCGEGVIQIQE 284
>gi|33322041|gb|AAQ06739.1|AF496083_1 methionyl-tRNA formyltransferase [Lactobacillus delbrueckii
subsp. lactis]
Length = 76
Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V+F+GT +F L+ L+ + + I++V TQP + G R K V S V + A LP
Sbjct: 3 VIFLGTPQFGATVLEGLIKAGYHILAVVTQPDKKVG-RKQKVVYSPVKEVALANDLPLYQ 61
Query: 65 P 65
P
Sbjct: 62 P 62
>gi|293192812|ref|ZP_06609707.1| methionyl-tRNA formyltransferase [Actinomyces odontolyticus F0309]
gi|292820059|gb|EFF79057.1| methionyl-tRNA formyltransferase [Actinomyces odontolyticus F0309]
Length = 272
Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 8/267 (2%)
Query: 48 LSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFY 106
S V + A EF + L T L + Q + D+ VVVAYG ++P +L G+
Sbjct: 3 PSPVAEVATEFGVELLETTTLKTPDIAQRIEDVQADLGVVVAYGGLVPPNVLAMPVHGWV 62
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H S LPRWRGAAP+Q AI GD T + +++ LDTG V +VPI L
Sbjct: 63 NLHFSDLPRWRGAAPVQWAIREGDATTASCVFNLEEGLDTGNVYSRVEVPIGHESAGELL 122
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
++ A ++ +D L + +PQ G+T+A ++ + V+F A I
Sbjct: 123 S-SMAEAGAGQVLGVVDALAAGSSTATPQPSEGVTHARRLEHVDGYVSFTHDAGYEDRVI 181
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVE-GEGKPG--EVINPNFTIACSQGAVRIMR 283
R+++P PGA+ + G R+KL ++ V+ + PG EV T+ C+ GA+ + +
Sbjct: 182 RSVTPNPGAYTVLPGGA---RMKLDKATPVDRDDLAPGQLEVTKKQVTVGCTSGALVLGK 238
Query: 284 LQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ AG +D + G +G
Sbjct: 239 VAPAGKSWMDAAAWARGARPSEDLRLG 265
>gi|332235917|ref|XP_003267151.1| PREDICTED: methionyl-tRNA formyltransferase, mitochondrial
[Nomascus leucogenys]
Length = 387
Score = 86.1 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 77/319 (24%), Positives = 126/319 (39%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-------HSIVSVYTQP-PRPAGRRGLKSVLSAVHKKA 55
RV+F GT +FA L+AL ++ + V T P P G V + A
Sbjct: 47 RVLFFGTDQFAREALRALHAARENKEEELIDKLEVVTMPSPSSKGL--------PVKQYA 98
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV VV ++G ++ + ++ G N H S LPR
Sbjct: 99 VQSQLPVY--------EWPDVGSGEYDVGVVASFGRLLNEALILKFPYGILNVHPSCLPR 150
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG AP+ ++ GD TG+ IM++ D GP+ VP+ L+ LS L
Sbjct: 151 WRGPAPVIHTVLHGDTVTGVTIMQIRPKRFDVGPILKQETVPVPPKSTAKELEAVLSRLG 210
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR------- 227
A+ ++ + L ++ Q G TYA KIS G + + + +
Sbjct: 211 ANMLISVLKNLPESLSNGRQQPTEGATYAPKISAGTSCIKWEEQTSEQIFRLYRAIGNTI 270
Query: 228 -ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIM 282
+ + ++++ + L +S+L PG VI + C G + +
Sbjct: 271 PLQTLWMANTIKLLDLVEVNSSVLADSKLTGQALIPGSVIYHKQSQILLVYCKDGWIGVR 330
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 331 SVML--KKALTATDFYNGY 347
>gi|301617959|ref|XP_002938392.1| PREDICTED: methionyl-tRNA formyltransferase, mitochondrial-like
[Xenopus (Silurana) tropicalis]
Length = 493
Score = 85.7 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 75/314 (23%), Positives = 123/314 (39%), Gaps = 33/314 (10%)
Query: 4 RVVFMGTSEFAVATLQALVS--SSHS-IVS---VYTQPPR-PAGRRGLKSVLSAVHKKAQ 56
V+F GT EFA+ +L+ L S+H +V V T P P G V +
Sbjct: 160 NVMFFGTDEFALESLKMLNQFRSTHEPVVGRLEVVTLPTHLPKGL--------PVKNYSV 211
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+P V + GQ DV VV ++G ++ + ++ G N H S LPRW
Sbjct: 212 NQGIPFHVWPQTGQC-------EQFDVGVVASFGRLLSEDLILQFPYGILNVHPSCLPRW 264
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
RG API ++ GD +TG+ IM++ D GP+ + P+ L+ +S A
Sbjct: 265 RGPAPIIHTVLNGDEKTGVTIMQIRPKRFDVGPIVKQEEYPVPPRCTAKELEGVMSKNGA 324
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR----ALSP 231
++ + L Q + Q G+T+A KI+ + V + + P
Sbjct: 325 EMLISVLKNLPQCLEHTTEQPTEGVTFAPKITASMSCVKWEEQTPEQIIRLERAVGFSMP 384
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIMRLQRA 287
W+ I + ++ + KPG + + + C G V + +
Sbjct: 385 LQAVWMGSPIKLLNFVEIPESVKISDSASKPGCLQYHHASQLLLVCCKDGWVGVRTIVL- 443
Query: 288 GGRVLDIGDFLLGC 301
+ L DF G
Sbjct: 444 -KKKLSARDFYNGY 456
>gi|260655753|ref|ZP_05861222.1| methionyl-tRNA formyltransferase [Jonquetella anthropi E3_33 E1]
gi|260629369|gb|EEX47563.1| methionyl-tRNA formyltransferase [Jonquetella anthropi E3_33 E1]
Length = 267
Score = 85.7 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 82/271 (30%), Positives = 137/271 (50%), Gaps = 9/271 (3%)
Query: 44 LKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFL--SFNADVAVVVAYGLVIPQRILNAT 101
+K + S + +KA + LP +L +E Q + DV +VV +G +I + L+
Sbjct: 1 MKELPSPLEEKAVDLGLPVARTLRLNGDEELQSRLSACPPDVMLVVDFGQMIRRPWLDGP 60
Query: 102 KLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNI 161
+ G N H SLLP+WRGAAP++RA+M GD G+ + + + +D+GP+ +P+ S+
Sbjct: 61 RAGCLNIHPSLLPKWRGAAPVRRALMNGDQTVGVTVFSLTEGMDSGPILLQEAMPLGSDD 120
Query: 162 NTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAEN 221
+ L +L+ + + ++ L PQ + T+A KI KGE R++ SA
Sbjct: 121 DAGTLLDKLADRGSELLASRLESFCAGGETLQPQDDREATFAPKIDKGECRLDAGESASR 180
Query: 222 VHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKP-GE--VINPNFTIACSQGA 278
+ +RALSP GAW E + +R+K+ ++ VE P G N I S GA
Sbjct: 181 LACLVRALSPDIGAWFEF----RGQRVKVWKAAPVEARTVPEGHMAFQGGNLLIGTSCGA 236
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+R+ +Q AG + L+ + G + I+
Sbjct: 237 LRLDLVQPAGKKPLEGVSWAQGLRLEGAEIL 267
>gi|46127541|ref|XP_388324.1| hypothetical protein FG08148.1 [Gibberella zeae PH-1]
Length = 662
Score = 85.7 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 64/282 (22%), Positives = 117/282 (41%), Gaps = 7/282 (2%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
V V LQ L++ + + V T P+ +V + +P + P
Sbjct: 11 VVFAYHNVGVRCLQVLLARNVRVPLVVTHEDDPSET----IWFDSVGTVCVKHGIPFITP 66
Query: 66 TKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
E+ + + D Y ++P +L+ + G YN H SLLP++RG AP+
Sbjct: 67 ANPKSEDLLSKVQALQPDFIFSFYYRYMLPTNLLDQARCGAYNMHGSLLPKYRGRAPVNW 126
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
AI+ G+ ETG+ + +M D G + ++PI + + +LS + + +
Sbjct: 127 AILHGETETGMTLHEMVAKPDAGAIVAQSRIPILPDETAFEVFGKLSTVAEQTLWNILPD 186
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
+ + +P +Y + + R+++ RSA N++N RA++P M+ G K
Sbjct: 187 MLEGRIPKLQNDIARGSYFGRRKPEDGRIDWRRSATNIYNLHRAVAPPYPGAWTMINGRK 246
Query: 245 HERIKLLESQLVEGEGKPGEVINPNFTIA-CSQG-AVRIMRL 284
K SQ +E G + + + C G + I L
Sbjct: 247 LIIGKASLSQRIEPHASVGLFVRDDMILGICGDGQYIIIDEL 288
>gi|148694146|gb|EDL26093.1| mitochondrial methionyl-tRNA formyltransferase, isoform CRA_a [Mus
musculus]
Length = 400
Score = 85.7 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 77/319 (24%), Positives = 128/319 (40%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-------HSIVSVYTQPP-RPAGRRGLKSVLSAVHKKA 55
RV+F+GT FA TL+AL ++ + V T P P G V + A
Sbjct: 58 RVLFLGTDHFARETLRALHAARDCKEEKLIEKLEVVTVPSLSPKGL--------PVKQYA 109
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV VV ++G ++ + ++ G N H S LPR
Sbjct: 110 IQSQLPVY--------EWPDVGSGEYDVGVVASFGRLLSEALILKFPYGILNVHPSCLPR 161
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG API ++ GD TG+ IM++ D GP+ +P+ + L+ LS L
Sbjct: 162 WRGPAPIIHTVLHGDTVTGVTIMQIRPKRFDIGPILQQETIPVPPKSTSKELEAVLSKLG 221
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP--- 231
A+ ++ + L ++ PQ G+TYA K+S G + V + +
Sbjct: 222 ANMLISVLKNLPESLNNGRPQPAEGVTYAPKVSAGTSCVKWEEQTSEQVLRLHLAIGDIV 281
Query: 232 -----FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIM 282
+ ++++ + L + +L PG V+ + C G + +
Sbjct: 282 PLQTLWMENTVKLLDLVEVNNSILADPKLTGQTVTPGFVVYHRPSQMLLVRCKDGWIGVR 341
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 342 SVML--KKTLTATDFYNGY 358
>gi|3288685|dbj|BAA31237.1| mitochondrial methionyl-tRNA transformylase [Bos taurus]
Length = 372
Score = 85.7 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 76/319 (23%), Positives = 127/319 (39%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHS-------IVSVYTQP-PRPAGRRGLKSVLSAVHKKA 55
RV+F G +FA TL+AL ++ + + V T P P P G V + A
Sbjct: 35 RVLFFGNDQFARETLRALHAARENKEEELIEKLEVVTVPSPSPKGL--------PVKQYA 86
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV VV ++G ++ + + G N H S LPR
Sbjct: 87 VQSQLPVY--------EWPDVGSGEYDVGVVASFGRLLSEAFILKFPYGILNVHPSCLPR 138
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG API I+ GD G+ IM++ D GP+ VP+ + L+ LS L
Sbjct: 139 WRGPAPIIHTILHGDTIAGVTIMQIKPRRFDVGPILKQETVPVPPKSTSKELEAVLSRLG 198
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR------- 227
A+ ++ + L ++ Q G+T+A KIS + + + +
Sbjct: 199 ANMLISVLKNLPESLNNGRQQPAEGVTHAPKISAATSCIKWEEQTSEQIFRLYRAVGNII 258
Query: 228 -ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIM 282
+ + ++++ + + L +S+L PG VI + C + +
Sbjct: 259 PLQTLWMDNTIKLLDLVEVDNSILSDSKLTGQAVIPGSVIYHKQSQILLVCCKDDWIGVR 318
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 319 SVML--KKTLTATDFYNGY 335
>gi|257054331|ref|YP_003132163.1| methionyl-tRNA formyltransferase [Saccharomonospora viridis DSM
43017]
gi|256584203|gb|ACU95336.1| methionyl-tRNA formyltransferase [Saccharomonospora viridis DSM
43017]
Length = 312
Score = 85.7 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 72/305 (23%), Positives = 123/305 (40%), Gaps = 19/305 (6%)
Query: 8 MGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK 67
G + TL+AL+ S H + V T P + +V A E + ++ +
Sbjct: 2 FGYQTWGHRTLRALLESEHDVALVVTHPHSDHAY--ERIWADSVADLATEHGVEVILRNR 59
Query: 68 LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127
Q ++ D+ V + IP I K G N H SLLP + G +PI A++
Sbjct: 60 PDQALADRLAELEPDLIVANNWRTWIPPEIFRLPKHGTLNVHDSLLPAYAGFSPIIWALL 119
Query: 128 AGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQ 187
G+ E G+ MD+ LD GP+ R V + L + L + E+++ +
Sbjct: 120 NGEKEVGVTAHMMDEELDAGPILLQRAVEVGPKDTATDLFHKTVDLIGPLVSESLELIAS 179
Query: 188 NNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMMIGNKHE 246
PQ + ++ K S ++R+++ AE++ +RA P+P A+ + +
Sbjct: 180 GRANPVPQDRSKASFFHKRSIEDSRIDWTWPAEDIERLVRAQSDPYPNAFTYY----RGQ 235
Query: 247 RIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGA-------VRIMRLQRAGGRVLDI 294
RI++ ++ + E G PG V I A + I RL+ G
Sbjct: 236 RIRITKAFVTERPYGGTPGRVFIREGDGVVIVAGADARHGRNPGLAIERLRTDDGVEHAA 295
Query: 295 GDFLL 299
DF
Sbjct: 296 TDFFR 300
>gi|221215128|ref|ZP_03588095.1| putative formyltransferase [Burkholderia multivorans CGD1]
gi|221165064|gb|EED97543.1| putative formyltransferase [Burkholderia multivorans CGD1]
Length = 315
Score = 85.7 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 70/310 (22%), Positives = 116/310 (37%), Gaps = 16/310 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNP----NENIWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P+ + +S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 PVVTPSDPADPALRRAVSDAQPDFIFSFYYRHMLPTDLLAIAPRGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+ L P P +Y + R+++ + A V+N +R P+PGA+ E
Sbjct: 177 RVLPALLAGEAPHLPNDLAAGSYYGGRKPEDGRIDWTQPAAQVYNLVRAVAPPYPGAFTE 236
Query: 239 MMIGNK-----HERIKLLESQLVEGEGKPGEVINPNFTIA-CSQG-AVRIMRL--QRAGG 289
+ + + PG ++ N C A+ I+ L QR G
Sbjct: 237 LAGTRFIVARARQAAPGSAAAAAAANLPPGLHVSDNALFGVCGDSRALSILELRQQRDGR 296
Query: 290 -RVLDIGDFL 298
V+ +F
Sbjct: 297 ESVVTPAEFA 306
>gi|56421660|ref|YP_148978.1| methionyl-tRNA formyltransferase [Geobacillus kaustophilus HTA426]
gi|56381502|dbj|BAD77410.1| methionyl-tRNA formyltransferase [Geobacillus kaustophilus HTA426]
Length = 299
Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 64/295 (21%), Positives = 122/295 (41%), Gaps = 24/295 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++V+F+G EF+ L+ + IV + ++ + A E ++P
Sbjct: 1 MKVLFIGCVEFSYQLLKTVHEQTDAEIVGIVSKEHSTFNADFKSLIP-----FAIENNIP 55
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L ++ E DV + ++P I+ KLG H +LLP RG P
Sbjct: 56 YL-NFLNNEQLSEWLSCLEYDVIYCFGWSHLLPLNIIKTAKLGAIGYHPALLPENRGRHP 114
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A+ G ETG MD+ D+G + KV I + L ++L + +++
Sbjct: 115 IIWALALGLEETGSTFFFMDEGADSGDIVSQVKVRIEKHDTAMDLYKKLMDVAKKQVIQF 174
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+L Q +L PQ Y K +K + +++ ++E+++N +R P+ GA
Sbjct: 175 TKELMQGSLTTIPQDHQKANYWRKRTKQDGLIDWRMTSESIYNLVRALYKPYVGAHCCYN 234
Query: 241 IGNKHERIKLLESQL-------VEGEGKPGEVI-----NPNFTIACSQGAVRIMR 283
+ K+ + + V+ +PG+VI +F + G + +++
Sbjct: 235 GHDY----KVWKVSIEDMNKFNVKQNIEPGKVIKVFQNKNSFIVKTGDGIIEVLQ 285
>gi|1772511|emb|CAA71358.1| Met-tRNAi formyl transferase [Escherichia coli str. K-12 substr.
MG1655]
Length = 155
Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 195 QIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQ 254
Q E +TYAEK+SK E R+++ SA + IRA +P+P +WLE+ + +K+ ++
Sbjct: 37 QDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIEG----QPVKVWKAS 92
Query: 255 LVEG--EGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP--VIIGC 307
+++ PG ++ +A G + ++ LQ AG + + D L + G
Sbjct: 93 VIDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQDLLNSRREWFVPGN 152
Query: 308 IV 309
+
Sbjct: 153 RL 154
>gi|170034933|ref|XP_001845326.1| methionyl-tRNA formyltransferase [Culex quinquefasciatus]
gi|167876784|gb|EDS40167.1| methionyl-tRNA formyltransferase [Culex quinquefasciatus]
Length = 323
Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 80/315 (25%), Positives = 137/315 (43%), Gaps = 28/315 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVS---SSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKAQE 57
LRV+F GT F++ +L+ L S+ ++ S V T K+ + + + A
Sbjct: 8 LRVLFFGTDNFSLPSLRILNDSFKSNGTVTSLEVVTS---------FKATKNPLKRFADG 58
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+L ++ + N D+ VVV++G +IP+ ++++ +LG N HASLLP+ R
Sbjct: 59 ENL---RLHDWPLQKTGSEVHRNFDLGVVVSFGHLIPEALISSFRLGMLNVHASLLPKLR 115
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
GAAPI AI AG ETG+ IM++ H D G + R VPI + L +L+ + A
Sbjct: 116 GAAPIVHAIAAGHTETGVTIMRIRPRHFDVGEILAQRHVPIGPHTLMPELHGQLANVGAA 175
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
A++ ++ L++ L Q + TYA KI + +
Sbjct: 176 ALLHCVENLDRYYRTLRTQDDGEATYAPKIVPQFADIRWAGMGAREVYDRFRALYSYKPL 235
Query: 237 LEMMIGNKHERIKL-----LESQLVEGEGKPGEVI----NPNFTIACSQG-AVRIMRLQR 286
+ + ++ E E + PGE+ + + C G V + +L
Sbjct: 236 TTRLGAELVKIFRVSCDGEGEIGGGEEDFVPGEIRFCRKSKRLRVRCGDGKMVCVEQLSI 295
Query: 287 AGGRVLDIGDFLLGC 301
G +V+ +F G
Sbjct: 296 GGKKVMSGQEFYNGF 310
>gi|118470693|ref|YP_884435.1| Formyl transferase [Mycobacterium smegmatis str. MC2 155]
gi|118171980|gb|ABK72876.1| Formyl transferase [Mycobacterium smegmatis str. MC2 155]
Length = 322
Score = 85.3 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 71/278 (25%), Positives = 118/278 (42%), Gaps = 12/278 (4%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
RVV G + TLQAL+ S H + V T P +V A+ + L
Sbjct: 5 RVVMFGYQTWGHRTLQALLKSRHEVCLVVTHPTSDHAY--ESIWADSVEDLARGAGIEVL 62
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+ + E E+ DV V + +P+ + + K G N H SLLP++ G +P+
Sbjct: 63 LAKRPTPELVERVRELAPDVGVANNWRTRLPRELFSIPKYGTVNLHDSLLPKFTGFSPVI 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
++++G +TG+ MD LDTG + R V I+ L + L + +A+D
Sbjct: 123 WSLISGAGQTGLTAHFMDDELDTGDILLQRSVEITPTSTGTSLVYDTLDLIPDVLEDALD 182
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIG 242
+E PQ + T+ K S ++ V++ A ++ IR P+P A+
Sbjct: 183 AIENGTATPVPQDLSQRTFFHKRSDRDSLVDWSWPAADIERFIRALSDPYPNAYTYF--- 239
Query: 243 NKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACS 275
+ ER++L+ + + G PG V N I
Sbjct: 240 -RGERLRLISAHVSRCTYGGTPGRVFIEENGGMVIVAG 276
>gi|262073112|ref|NP_001159995.1| methionyl-tRNA formyltransferase, mitochondrial [Bos taurus]
gi|143811390|sp|O77480|FMT_BOVIN RecName: Full=Methionyl-tRNA formyltransferase, mitochondrial;
Short=MtFMT; Flags: Precursor
gi|296483597|gb|DAA25712.1| methionyl-tRNA formyltransferase, mitochondrial [Bos taurus]
Length = 390
Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 76/319 (23%), Positives = 127/319 (39%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHS-------IVSVYTQP-PRPAGRRGLKSVLSAVHKKA 55
RV+F G +FA TL+AL ++ + + V T P P P G V + A
Sbjct: 53 RVLFFGNDQFARETLRALHAARENKEEELIEKLEVVTVPSPSPKGL--------PVKQYA 104
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV VV ++G ++ + + G N H S LPR
Sbjct: 105 VQSQLPVY--------EWPDVGSGEYDVGVVASFGRLLSEAFILKFPYGILNVHPSCLPR 156
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG API I+ GD G+ IM++ D GP+ VP+ + L+ LS L
Sbjct: 157 WRGPAPIIHTILHGDTIAGVTIMQIKPRRFDVGPILKQETVPVPPKSTSKELEAVLSRLG 216
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR------- 227
A+ ++ + L ++ Q G+T+A KIS + + + +
Sbjct: 217 ANMLISVLKNLPESLNNGRQQPAEGVTHAPKISAATSCIKWEEQTSEQIFRLYRAVGNII 276
Query: 228 -ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIM 282
+ + ++++ + + L +S+L PG VI + C + +
Sbjct: 277 PLQTLWMDNTIKLLDLVEVDNSILSDSKLTGQAVIPGSVIYHKQSQILLVCCKDDWIGVR 336
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 337 SVML--KKTLTATDFYNGY 353
>gi|307729551|ref|YP_003906775.1| formyl transferase domain-containing protein [Burkholderia sp.
CCGE1003]
gi|307584086|gb|ADN57484.1| formyl transferase domain protein [Burkholderia sp. CCGE1003]
Length = 311
Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 67/290 (23%), Positives = 114/290 (39%), Gaps = 9/290 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVEVALVVTHEDSPTEN----IWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P E + D Y ++P +L G YN H SLLP++RG
Sbjct: 57 AVVTPADPKSPELRAAISAVRPDFIFSFYYRHMLPVDLLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLHGETETGATLHEMAAKPDAGAIIAQTPVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+ L P P + +Y + + R+++ + A+ V+N IR P+PGA+ +
Sbjct: 177 RVLPALLAGEAPHLPNDLSHGSYFGGRTPEDGRIDWNQPAQQVYNLIRAVAPPYPGAFTD 236
Query: 239 MMIGNKHE-RIKLLESQLVEGEGKPGEVINPNFTIA-CSQG-AVRIMRLQ 285
+ R +L + + PG ++ N A C G A+ + L+
Sbjct: 237 IGGRRFVVARARLATPGALRSDLPPGLHVSDNAVFAICGDGRAIAVHELR 286
>gi|307186303|gb|EFN71966.1| 10-formyltetrahydrofolate dehydrogenase [Camponotus floridanus]
Length = 900
Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 82/303 (27%), Positives = 123/303 (40%), Gaps = 25/303 (8%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L+V +G S FA + L + H I V+T P + G R + A+ +
Sbjct: 1 MAQLKVAIIGQSPFAAEVYKLLRQNGHQITGVFTIPDK--GNR-----EDPLAITAKADN 53
Query: 60 LPALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P E E + D+ V+ IP ++N + H SLL
Sbjct: 54 TPVFKIKAWRSKGVALPEILELYKGIEVDLNVLPFCTQFIPMEVINHPRHRSICYHPSLL 113
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SV 172
PR RGA+ I ++ GD+ G +I D LDTGP+ + + N L
Sbjct: 114 PRHRGASAISWTLIQGDDTAGFSIFWADDGLDTGPLLLQKSCKVEPNDTVDTLYNNFLYP 173
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAE-KISKGETRVNFCRSAENVHNHIRALSP 231
AM EA+D + + P+ PQ E G TY K ++++ + A+ VHN IR L
Sbjct: 174 EGIKAMGEAVDLVAKEIAPMIPQPEEGATYDPLLNKKDLQKIDWTKPAKEVHNFIRGLDS 233
Query: 232 FPGAWLEMMIGNK-------HERIKLLESQL-VEGEGKPGEVINPNFTIACSQG-AVRIM 282
PGAW + KL E Q+ V+ E + G V + I G V +
Sbjct: 234 TPGAWTILNNEEVRLFGSSLWSNGKLPEVQMEVDLEERKGIVHSDGLLIKAGDGQCVNVE 293
Query: 283 RLQ 285
R++
Sbjct: 294 RIK 296
>gi|281347323|gb|EFB22907.1| hypothetical protein PANDA_002171 [Ailuropoda melanoleuca]
Length = 384
Score = 84.9 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 77/319 (24%), Positives = 129/319 (40%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHS-------IVSVYTQP-PRPAGRRGLKSVLSAVHKKA 55
RV+F GT FA TL+AL ++ + + V T P P P G V + A
Sbjct: 53 RVLFFGTDHFARETLRALHAARENKEEELIEKLEVVTVPSPSPKGL--------PVKQYA 104
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV V+ ++G ++ + ++ G N H S LPR
Sbjct: 105 VQSQLPVY--------EWPDVGSGEYDVGVLASFGRLLSEALILKFPYGILNVHPSCLPR 156
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKH-LDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG API ++ GD TG+ IM++ + D GP+ +P+ L+ LS L
Sbjct: 157 WRGPAPIIHTVLHGDTVTGVTIMQIRPNRFDVGPILKQETIPVPPKSTAKELEAVLSRLG 216
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR------- 227
A+ ++ + L ++ Q G+T+A KIS G + + + +
Sbjct: 217 ANMLISVLKNLPESLSNGRQQPAEGVTHAPKISAGTSCIKWEEQTSEQIIRLHRAIGTII 276
Query: 228 -ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIM 282
+ + ++++ + L + +L PG VI + C G V +
Sbjct: 277 PLQTLWMDNTIKLLDLVEVNSSVLTDPKLRGQPVFPGSVIYHKQSQILLVCCKDGWVGVR 336
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 337 SVML--KKTLTATDFYNGY 353
>gi|213403692|ref|XP_002172618.1| methionyl-tRNA formyltransferase [Schizosaccharomyces japonicus
yFS275]
gi|212000665|gb|EEB06325.1| methionyl-tRNA formyltransferase [Schizosaccharomyces japonicus
yFS275]
Length = 356
Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 69/328 (21%), Positives = 123/328 (37%), Gaps = 34/328 (10%)
Query: 4 RVVFMGTSEFAVATLQALVSS-----SHSIVSVYTQPPRPAGRR----GLKSVLSAVHKK 54
RVVF GT +FAV L+++V +V V + R GRR +++ S+V ++
Sbjct: 10 RVVFFGTDDFAVPILRSVVELLRPQVEQRLV-VVSGSGRNTGRRRNDISKQTLASSVSRE 68
Query: 55 AQEFSLPALVPT----------KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLG 104
AQE +P + + + D+A+ ++G IP ILN G
Sbjct: 69 AQEHGIPVYQFPGKETLNTTASNVAPDWQALKKFTHGDLAIAASFGRFIPASILNQFTYG 128
Query: 105 FYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTA 164
N H SLLP++RG PI AI+ ++TG++I ++ +K + + T
Sbjct: 129 GINVHPSLLPQFRGPGPIYAAILRQVSKTGVSIQRIHPAEFDKGELLAQKAYVMNGTETY 188
Query: 165 GLQQELSVLCAHAMVEAMDKLEQNNLPLSPQ-------IENGITYAEKISKGETRVNFCR 217
+ ++ + +L + +P+ + + +
Sbjct: 189 EQLCQTLAQIGAGLLSRVLRLGTYDKDNAPEGITSFLGKRVQVAESWAPKVDLKQAFVEW 248
Query: 218 SAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVE---GEGKPGEVI---NPNFT 271
+ F + GN + + E PG + N F
Sbjct: 249 DSYTTAQVYAISRAFGFIKTCLPTGNSITLWGIQPVMVDETTCANVAPGTFMRCFNNEFW 308
Query: 272 IACSQGAVRI-MRLQRAGGRVLDIGDFL 298
I GAVRI +Q AG + + G+++
Sbjct: 309 IKTIDGAVRINDSIQLAGRKRVSAGEWI 336
>gi|254252213|ref|ZP_04945531.1| Methionyl-tRNA formyltransferase [Burkholderia dolosa AUO158]
gi|124894822|gb|EAY68702.1| Methionyl-tRNA formyltransferase [Burkholderia dolosa AUO158]
Length = 512
Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 68/302 (22%), Positives = 114/302 (37%), Gaps = 21/302 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 198 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNP----NENIWFGSVASVAAEHGI 253
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P + +S D Y ++P +L G YN H SLLP++RG
Sbjct: 254 PVVTPADPADPALRRAVSDARPDFIFSFYYRHMLPPDLLAIAPRGAYNMHGSLLPKYRGR 313
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 314 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLW 373
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L + P P + +Y + R+++ + A V+N +RA++P +
Sbjct: 374 RVLPALLAGDAPHLPNDLSAGSYYGGRKPEDGRIDWTKPAAQVYNLVRAVAP---PYPGA 430
Query: 240 MIGNKHERIKLLESQLV---------EGEGKPG-EVINPNFTIACSQG-AVRIMRL--QR 286
ER + ++L + PG V + C A+ I+ L QR
Sbjct: 431 FTDVAGERFVVARARLAGPGSAAAAAAADLPPGLHVSDNALLGVCGDSRALSILELWQQR 490
Query: 287 AG 288
G
Sbjct: 491 DG 492
>gi|325520498|gb|EGC99596.1| putative formyltransferase [Burkholderia sp. TJI49]
Length = 315
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 72/314 (22%), Positives = 118/314 (37%), Gaps = 24/314 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNP----NENIWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P + D ++P +L G YN H SLLP++RG
Sbjct: 57 PVLTPADPADPALRRAVSAAQPDFIFSFYSRHMLPADLLAIAPRGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+ L P P + +Y + R+++ + A V+N +R P+PGA+ E
Sbjct: 177 RVLPALLAGEAPHLPNDLSSGSYYGGRKPEDGRIDWSKPAAQVYNLVRAVAPPYPGAFTE 236
Query: 239 MMIGNKHERIKLLESQL---------VEGEGKPGEVINPNFTIA-CSQG-AVRIMRL--Q 285
+ R + ++L + PG ++ N C A+ I+ L Q
Sbjct: 237 IDGT----RFVVARARLAAPGSAAAIAAADLPPGLHVSDNALFGVCGDSRALSILELWQQ 292
Query: 286 RAGG-RVLDIGDFL 298
R GG V+ +F
Sbjct: 293 RDGGETVVTPAEFA 306
>gi|218508237|ref|ZP_03506115.1| methionyl-tRNA formyltransferase [Rhizobium etli Brasil 5]
Length = 64
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 247 RIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIG 306
R+K+L S+L G+G G+++ + +AC+ GAVR+ RLQ+AGG+ L DFL G P+ G
Sbjct: 1 RVKVLGSELAAGQGAAGQLLTDDLVVACASGAVRLTRLQKAGGKPLAASDFLRGTPLAAG 60
Query: 307 CIV 309
+
Sbjct: 61 ARL 63
>gi|300691692|ref|YP_003752687.1| methionyl-tRNA formyltransferase [Ralstonia solanacearum PSI07]
gi|299078752|emb|CBJ51412.1| Methionyl-tRNA formyltransferase [Ralstonia solanacearum PSI07]
Length = 311
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 68/290 (23%), Positives = 116/290 (40%), Gaps = 13/290 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT R V V L+ L + + V T A +V AQE +
Sbjct: 1 MTRRAVVFAYHNVGVRCLRVLAARGIQVELVVTHEDNAAEN----IWFGSVRATAQELGI 56
Query: 61 P-ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P G++ Y + + D Y +IP R+L G +N H SLLP++RG
Sbjct: 57 PFVTPEDARGEDLYARIAAIAPDFIFSFYYRHMIPMRLLGLATQGAFNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
PI A++ G+ ETG + +M + D G + VPI + + ++ +V +
Sbjct: 117 VPINWAVLHGETETGATLHEMVEKPDAGYIVDQTVVPILPDDTAHDVFEKATVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
A+ + +P P +Y + R+++ + A+ V+N +RA++P +
Sbjct: 177 RALPAMIAGRIPQHPNRLEDGSYFGGRKPEDGRIDWSKPAQQVYNLVRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQLVE---GEGKPG-EVINPNFTIACSQ-GAVRIMRL 284
ER + ++L PG V++ C GA+ I L
Sbjct: 234 FADAGGERYIVARARLARQTISNLPPGLHVVDNAMFGVCGDGGAIAIHEL 283
>gi|301756903|ref|XP_002914293.1| PREDICTED: methionyl-tRNA formyltransferase, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 393
Score = 84.2 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 77/319 (24%), Positives = 129/319 (40%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHS-------IVSVYTQP-PRPAGRRGLKSVLSAVHKKA 55
RV+F GT FA TL+AL ++ + + V T P P P G V + A
Sbjct: 53 RVLFFGTDHFARETLRALHAARENKEEELIEKLEVVTVPSPSPKGL--------PVKQYA 104
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV V+ ++G ++ + ++ G N H S LPR
Sbjct: 105 VQSQLPVY--------EWPDVGSGEYDVGVLASFGRLLSEALILKFPYGILNVHPSCLPR 156
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKH-LDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG API ++ GD TG+ IM++ + D GP+ +P+ L+ LS L
Sbjct: 157 WRGPAPIIHTVLHGDTVTGVTIMQIRPNRFDVGPILKQETIPVPPKSTAKELEAVLSRLG 216
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR------- 227
A+ ++ + L ++ Q G+T+A KIS G + + + +
Sbjct: 217 ANMLISVLKNLPESLSNGRQQPAEGVTHAPKISAGTSCIKWEEQTSEQIIRLHRAIGTII 276
Query: 228 -ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIM 282
+ + ++++ + L + +L PG VI + C G V +
Sbjct: 277 PLQTLWMDNTIKLLDLVEVNSSVLTDPKLRGQPVFPGSVIYHKQSQILLVCCKDGWVGVR 336
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 337 SVML--KKTLTATDFYNGY 353
>gi|57528326|ref|NP_001009697.1| methionyl-tRNA formyltransferase, mitochondrial precursor [Rattus
norvegicus]
gi|73919414|sp|Q5I0C5|FMT_RAT RecName: Full=Methionyl-tRNA formyltransferase, mitochondrial;
Short=MtFMT; Flags: Precursor
gi|56972138|gb|AAH88470.1| Mitochondrial methionyl-tRNA formyltransferase [Rattus norvegicus]
gi|149041986|gb|EDL95827.1| mitochondrial methionyl-tRNA formyltransferase, isoform CRA_a
[Rattus norvegicus]
Length = 385
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 75/319 (23%), Positives = 126/319 (39%), Gaps = 39/319 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-------HSIVSVYTQPP-RPAGRRGLKSVLSAVHKKA 55
RV+F GT FA L+AL ++ + V T P P G V + A
Sbjct: 44 RVLFFGTDHFAREALRALHAARDNKEEKLIEKLEVVTVPSISPKGL--------PVKQYA 95
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV VV ++G ++ + ++ G N H S LPR
Sbjct: 96 IQSQLPVY--------EWPDMGSGEYDVGVVASFGRLLSEALILKFPYGILNVHPSCLPR 147
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG API ++ GD TG+ IM++ D GP+ V + + L+ LS L
Sbjct: 148 WRGPAPIIHTVLHGDTVTGVTIMQVRPKRFDVGPILKQETVAVPPKSTSKELEAVLSKLG 207
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP--- 231
A+ ++ + L ++ PQ G+TYA K+S G + V + +
Sbjct: 208 ANMLISVLKNLPESLNNGRPQPAEGVTYAPKVSAGTSCVKWEEQTSEQVLRLHLAIGDIV 267
Query: 232 -----FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIM 282
+ ++++ + L + +++ PG V+ + C G + +
Sbjct: 268 PLQTLWMENTVKLLDLVEVNNSILADPKVMGQTVTPGSVVYHRPSQMLLVHCKDGWIGVR 327
Query: 283 RLQRAGGRVLDIGDFLLGC 301
+ + L DF G
Sbjct: 328 SIM--HKKTLTATDFYNGY 344
>gi|300704305|ref|YP_003745908.1| methionyl-tRNA formyltransferase [Ralstonia solanacearum CFBP2957]
gi|299071969|emb|CBJ43299.1| Methionyl-tRNA formyltransferase [Ralstonia solanacearum CFBP2957]
Length = 311
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 66/287 (22%), Positives = 114/287 (39%), Gaps = 7/287 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT R V V L+ L + + V T A +V AQE +
Sbjct: 1 MTRRAVVFAYHNVGVRCLRVLAARGIQVELVVTHEDNAAEN----IWFGSVRATAQELGI 56
Query: 61 P-ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P G++ Y + + D Y +IP R+L G +N H SLLP++RG
Sbjct: 57 PFVTPEDARGEDLYARIAALAPDFIFSFYYRHMIPMRLLGLATQGAFNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
PI A++ G+ ETG + +M + D G + VPI + + ++ +V +
Sbjct: 117 VPINWAVLHGETETGATLHEMVEKPDAGYIVDQTVVPILPDDTAHEVFEKATVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
A+ + +P P +Y + R+++ A+ V+N +RA++P
Sbjct: 177 RALPAMIAGCIPRHPNRLEDGSYFGGRKPEDGRIDWSGPAQQVYNLVRAVAPPYPGAFTD 236
Query: 240 MIGNKHERIKLLESQLVEGEGKPG-EVINPNFTIACSQ-GAVRIMRL 284
G ++ + ++ PG V++ C GA+ I L
Sbjct: 237 AGGERYIVARARLARQTFSNLPPGLHVVDNAMFGVCGDGGAIAIHEL 283
>gi|207723275|ref|YP_002253674.1| uridine 5''-diphospho--(4-deoxy-4-formamido-l-arabinose) synthase
(formyltransferase) protein [Ralstonia solanacearum
MolK2]
gi|207743331|ref|YP_002259723.1| uridine 5''-diphospho--(4-deoxy-4-formamido-l-arabinose) synthase
(formyltransferase) protein [Ralstonia solanacearum
IPO1609]
gi|206588473|emb|CAQ35436.1| uridine 5''-diphospho--(4-deoxy-4-formamido-l-arabinose) synthase
(formyltransferase) protein [Ralstonia solanacearum
MolK2]
gi|206594728|emb|CAQ61655.1| uridine 5''-diphospho--(4-deoxy-4-formamido-l-arabinose) synthase
(formyltransferase) protein [Ralstonia solanacearum
IPO1609]
Length = 311
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 65/287 (22%), Positives = 113/287 (39%), Gaps = 7/287 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT R V V L+ L + + V T A +V AQE +
Sbjct: 1 MTRRAVVFAYHNVGVRCLRVLAARGIQVELVVTHEDNAAEN----IWFGSVRATAQELGI 56
Query: 61 P-ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P G++ + + + D Y +IP +L K G +N H SLLP++RG
Sbjct: 57 PFVTPEDARGEDLHARIAALAPDFIFSFYYRHMIPMGLLGLAKQGAFNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
PI A++ G+ ETG + +M + D G + VPI + + ++ +V +
Sbjct: 117 VPINWAVLHGETETGATLHEMVEKPDAGYIVDQTVVPILPDDTAHEVFEKATVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
A+ + P P +Y + R+++ A+ V+N +RA++P
Sbjct: 177 RALPAMIAGCAPQHPNRLEDGSYFGGRKPEDGRIDWSGPAQQVYNLVRAVAPPYPGAFTD 236
Query: 240 MIGNKHERIKLLESQLVEGEGKPG-EVINPNFTIACSQ-GAVRIMRL 284
G ++ + ++ PG V++ C GA+ I L
Sbjct: 237 AGGERYIVARARLARQTFSNLPPGLHVVDNAMFGVCGDGGAIAIHEL 283
>gi|309782217|ref|ZP_07676946.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Ralstonia sp. 5_7_47FAA]
gi|308918988|gb|EFP64656.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Ralstonia sp. 5_7_47FAA]
Length = 313
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 64/284 (22%), Positives = 115/284 (40%), Gaps = 7/284 (2%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R V V L+ LV+ + V T +V AQE +P +
Sbjct: 8 RAVVFAYHNVGVRCLRVLVARGIQVELVVTHEDNATEN----IWFGSVRATAQELGIPYI 63
Query: 64 VPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P ++ + + + D Y +IP R+L+ K G +N H SLLP++RG PI
Sbjct: 64 TPDNANGDDLHARIAAIAPDFIFSFYYRHMIPMRLLSLAKFGAFNMHGSLLPKYRGRVPI 123
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ ETG + +M + D G + VPI + + + ++ +V + A+
Sbjct: 124 NWAVLHGETETGATLHEMVEKPDAGYIVDQTVVPILPDDTSHEVFEKATVAAEQTLWRAL 183
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ ++P P +Y + R+++ + A+ V+N IRA++P
Sbjct: 184 PAMIAGHIPQHPNELANGSYFGGRKPDDGRIDWSKPAQQVYNLIRAVAPPYPGAFTDAGS 243
Query: 243 NKHERIKLLESQLVEGEGKPG-EVINPNFTIACSQ-GAVRIMRL 284
+ + + PG V++ C GA+ I L
Sbjct: 244 ERFVVARARLAHQTFTNLPPGLHVVDNAMFGVCGDGGAIAIHEL 287
>gi|299067375|emb|CBJ38574.1| Methionyl-tRNA formyltransferase [Ralstonia solanacearum CMR15]
Length = 311
Score = 83.8 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 62/287 (21%), Positives = 112/287 (39%), Gaps = 7/287 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT R V V L+ L + + V T +V AQE +
Sbjct: 1 MTRRAVVFAYHNVGVRCLRVLAARGIQVELVVTHEDSATEN----IWFGSVRATAQELGI 56
Query: 61 P-ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P G++ + + + D Y +IP R+L G +N H SLLP++RG
Sbjct: 57 PFVTPEDARGEDLFARIAAIAPDFIFSFYYRHMIPVRLLGLATHGAFNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ E+G + +M + D G + VPI + + ++ +V +
Sbjct: 117 VPTNWAVLHGETESGATLHEMVEKPDAGYIVDQTIVPILPDDTAHEVFEKTTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + +P P +Y + R+++ R A+ V+N +RA++P
Sbjct: 177 RVLPDMIAGRIPQRPNRLEDGSYFGGRKPEDGRIDWSRPAQQVYNLVRAVAPPYPGAFTD 236
Query: 240 MIGNKHERIKLLESQLVEGEGKPG-EVINPNFTIACSQ-GAVRIMRL 284
G ++ + ++ PG V++ C GA+ I L
Sbjct: 237 AGGERYIVARARLARPSFSNLPPGLHVVDNAMFGVCGDGGAIAIHEL 283
>gi|169837130|ref|ZP_02870318.1| Methionyl-tRNA formyltransferase [candidate division TM7
single-cell isolate TM7a]
Length = 99
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 1 MTLR---VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M + ++F GT +F++ TL+ALV + +I +V T+P G RG K AV A E
Sbjct: 1 MKKKSKTIIFFGTEDFSLITLKALVEAGFNIGAVVTKPDARRG-RGTKKSQPAVKIYANE 59
Query: 58 FSLPALVPTK 67
++ P
Sbjct: 60 HNIQVWQPQN 69
>gi|158298445|ref|XP_318614.3| AGAP009591-PA [Anopheles gambiae str. PEST]
gi|157013884|gb|EAA14598.3| AGAP009591-PA [Anopheles gambiae str. PEST]
Length = 923
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 65/319 (20%), Positives = 124/319 (38%), Gaps = 31/319 (9%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L++ +G S FA L+ L+ H IV V+T + A + A++ +P
Sbjct: 12 LKIAIIGQSNFAAEVLELLLERDHLIVGVFTIADKAA-------REDVLATVARQHGIPV 64
Query: 63 LVPTKLGQEEYE------QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ ++ Q+ S A++ V+ IP +++ G H S+LP
Sbjct: 65 FKFSAWRRKGVPIPEVLEQYRSVGANLNVLPFCSQFIPMEVIDGAAYGSICYHPSILPLH 124
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGA+ I ++ GD G +I D LDTGP+ ++ P+ + L +
Sbjct: 125 RGASAISWTLIEGDERAGFSIFWADDGLDTGPILLQKQCPVYGDDTLDTLYKRFLYPEGV 184
Query: 177 AMV-EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI--------- 226
+ EA+D + P PQ E G +Y + + E + +
Sbjct: 185 TAMAEAVDMIAAGTAPKIPQTEIGASYDPALFREENQYLNLNQPAVRIFNFIRGLDSVPG 244
Query: 227 ----RALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGE--VINPNFTIACSQGAV- 279
+ + + + R ++ + ++ +G G V I + G++
Sbjct: 245 ALAVVRMEDGEEVPVRLYGASLSARRSMVNGKPIQFKGSTGSAFVTREGIFITGTDGSLV 304
Query: 280 RIMRLQRAGGRVLDIGDFL 298
R+ R++R G RV+ G++
Sbjct: 305 RVRRIKR-GNRVIPAGEWF 322
>gi|195398554|ref|XP_002057886.1| GJ17852 [Drosophila virilis]
gi|194141540|gb|EDW57959.1| GJ17852 [Drosophila virilis]
Length = 913
Score = 83.4 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 71/321 (22%), Positives = 125/321 (38%), Gaps = 32/321 (9%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+LR+ +G S FA L+ L+ S IV V+T P + G R + A ++
Sbjct: 4 SLRIAIIGQSNFAADVLELLLERSIFQIVGVFTIPDK--GSR-----EDVLASTAASHNI 56
Query: 61 PALVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
P ++ Q+ S A + V+ IP +++ LG H SLLP
Sbjct: 57 PVFKFASWRRKGMALPDVVAQYKSVGATLNVLPYCSQFIPIEVIDGASLGSICYHPSLLP 116
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
R RGA+ I ++ GD G +I D LDTGP+ R+ + + +
Sbjct: 117 RHRGASAISWTLIEGDEVAGFSIFWADDGLDTGPLLLQRQTNVEPTDTLDTIYKRFLYPE 176
Query: 175 AHAMV-EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ EA+D + Q P Q E TY + K E ++ + + +
Sbjct: 177 GVKAMGEAVDMVAQGTAPKIIQTEVSATYDPAMFKAENQLLDLQQSAERIWNFVRGLDSV 236
Query: 234 G--AWLEMMIGNKHERIKLLESQL-------------VEGEGKPGEVINPNFTIACSQGA 278
+ ++++L + + ++G KP V I + GA
Sbjct: 237 PGAIATVLEDDGSEQQVRLFGAHIYSAGPVKGGQPLKLKGLAKPAWVHEGGLLIEGTDGA 296
Query: 279 -VRIMRLQRAGGRVLDIGDFL 298
V + R++R G ++++ D+
Sbjct: 297 FVNVRRIKR-GSKMINASDWF 316
>gi|206560297|ref|YP_002231061.1| putative formyltransferase [Burkholderia cenocepacia J2315]
gi|198036338|emb|CAR52234.1| L-arabinose formyltransferase [Burkholderia cenocepacia J2315]
Length = 315
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 66/302 (21%), Positives = 111/302 (36%), Gaps = 21/302 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNP----NENIWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P + ++ D Y ++P +L G YN H SLLP++RG
Sbjct: 57 PVVTPADPADPALRRAVADAQPDFIFSFYYRHMLPVDLLAIAPRGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIIGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L P +Y + RV++ + A V+N +RA++P +
Sbjct: 177 RVLPALLAGEASHLPNDLATGSYYGGRKPEDGRVDWSKPAAQVYNLVRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQL---------VEGEGKPGEVINPNFTIA-CSQG-AVRIMRL--QR 286
R + ++L + PG ++ N C A+ I+ L QR
Sbjct: 234 FTDIHGARFVIARARLAAPGSAAAAAAADLPPGLHVSDNALFGVCGDSRALSILELRQQR 293
Query: 287 AG 288
G
Sbjct: 294 DG 295
>gi|42523179|ref|NP_968559.1| putative formyltransferase [Bdellovibrio bacteriovorus HD100]
gi|39575384|emb|CAE79552.1| putative formyltransferase [Bdellovibrio bacteriovorus HD100]
Length = 295
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 62/287 (21%), Positives = 114/287 (39%), Gaps = 11/287 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++ F+G +F+ A L+ +++ + + T+ A+E +P
Sbjct: 1 MKIAFIGCVDFSEAMLRTVLNVPKAEVCCIITRKASSFNSDFRDLTP-----IAEERKIP 55
Query: 62 ALV-PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ + DV + ++ ILN ++LG H + LP RG
Sbjct: 56 VFHATGNMQSSMESFLQEHSPDVIFCFGWSYLLQPAILNLSRLGVVGFHPAELPENRGRH 115
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI A+ G +T MD D+G + + + IS + + A L ++ + +
Sbjct: 116 PIIWALALGLKQTASTFFWMDDGADSGDILSQQPIQISDDDDAASLYHKVIETAQNQVAV 175
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEM 239
+ L + PQ TY K K + R++F S+ +HN +R P+ GA +E
Sbjct: 176 FVTDLLVGRVIRLPQDATRATYWRKRGKSDGRIDFRMSSSGIHNLVRALARPYVGAHVEK 235
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMR 283
+ L S + +PG+V+ N TI S A+ I+
Sbjct: 236 DGQDYKVWKTRLSSVVFPVNIEPGKVVAVNGSVLTIKTSDSAIDILE 282
>gi|291233521|ref|XP_002736701.1| PREDICTED: aldehyde dehydrogenase 1 family, member L1-like
[Saccoglossus kowalevskii]
Length = 923
Score = 83.0 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 120/311 (38%), Gaps = 24/311 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++ +G S+F L + H +V V+T P G + + A +
Sbjct: 22 KMKIAVIGQSQFGQEVYSLLRKNGHEVVGVFTVPD--VGGK-----PDPLAVAAHNDGVK 74
Query: 62 ALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ E E+F + A++ V+ IP +++ K G H S+LPR
Sbjct: 75 VYKYPRWRVKGKEIPEVVEEFKACGAELNVLPFCSQFIPMSVIDHPKHGSIIYHPSILPR 134
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I +M GD + G I D LDTGP+ ++ I N +
Sbjct: 135 HRGASAINWTLMCGDKKGGFTIFWADDGLDTGPILLQKECDIEPNDTVDTIYNRFLYPEG 194
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGET-RVNFCRSAENVHNHIRALSPFP 233
AM EA+D + + P Q E G TY + K +N+ + AE +HN IR P
Sbjct: 195 IKAMGEAVDLIHEGKAPRIAQSEEGATYDKIWKKKSVAEINWNQPAEVLHNFIRGNDKQP 254
Query: 234 GAWLEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRL 284
GAW + L + + G KPG + + + G + + L
Sbjct: 255 GAWSTVDGQQLTFYGSSLFDGSDPEGSALEIPGMSKPGIIHKDGLVLYGNDGKKLNVKTL 314
Query: 285 QRAGGRVLDIG 295
G+++
Sbjct: 315 LCEDGKMVQAS 325
>gi|58267826|ref|XP_571069.1| methionyl-tRNA formyltransferase [Cryptococcus neoformans var.
neoformans JEC21]
gi|134112327|ref|XP_775139.1| hypothetical protein CNBE4130 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257791|gb|EAL20492.1| hypothetical protein CNBE4130 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227303|gb|AAW43762.1| methionyl-tRNA formyltransferase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 420
Score = 83.0 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 64/334 (19%), Positives = 131/334 (39%), Gaps = 34/334 (10%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSI---VSVYTQPPRPAGRRGLKSVL----SAVHKK 54
R++F G+ +F+VA+L+A+ + + + V R GR G + A+
Sbjct: 76 PFRILFCGSDDFSVASLKAVYEAK-DVWSSIDVVVPAEREIGRGGKHAHHEKYTPALRLY 134
Query: 55 AQEFSLPA-------LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYN 107
A++ +LP L + L+ + + ++ + + + N
Sbjct: 135 AEQNNLPVSTIPSTGLKAWSPPEPFTSSDLNSSHMLLTASFGHIIPLRLLKLFPPIQRLN 194
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQ 167
H SLLPRWRGAAP+Q I +GD ETG+++ + ++ + +
Sbjct: 195 VHPSLLPRWRGAAPLQWTIASGDEETGVSVQTLVRYALGVDAGDILGRAEGIKVPHDTRY 254
Query: 168 QELSVLCA----HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRS----- 218
+ L A +V+ + K++ + + Q E IT A KI+ +R+++ +
Sbjct: 255 ETLLPSLAGAGGKLLVDVLRKIQNGTVTTAAQDERYITLAPKITHETSRIDWEKHTAEMI 314
Query: 219 ---AENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGE-VI-----NPN 269
+ + F +++ + R+ L PG ++ +
Sbjct: 315 DRLHRGFTHQYPLWTSFLDTTAQILSLHPIPRLSLPMPLYQPEAITPGTGILYRQGKSRR 374
Query: 270 FTIAC-SQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+AC + + ++ AG + L I ++ G P
Sbjct: 375 LFVACAGDSWLEVQEIKAAGKKALGIKEWWNGLP 408
>gi|170733221|ref|YP_001765168.1| putative formyltransferase [Burkholderia cenocepacia MC0-3]
gi|169816463|gb|ACA91046.1| formyl transferase domain protein [Burkholderia cenocepacia MC0-3]
Length = 315
Score = 82.6 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 68/302 (22%), Positives = 112/302 (37%), Gaps = 21/302 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNP----NENIWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P + +S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 PVVTPADSADPALRRAVSDAQPDFIFSFYYRHMLPVDLLAIAPRGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIIAQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L P P +Y + RV++ + A V+N +RA++P +
Sbjct: 177 RVLPALLAGEAPHLPNDLATGSYYGGRKPEDGRVDWSKPAAQVYNLVRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQL---------VEGEGKPGEVINPNFTIA-CSQG-AVRIMRL--QR 286
R + ++L + PG ++ N C A+ I+ L QR
Sbjct: 234 FTDVDGARFVIARARLAAPGSAAAAAAADLPPGLHVSDNALFGVCGDSRALSILELRQQR 293
Query: 287 AG 288
G
Sbjct: 294 DG 295
>gi|291613840|ref|YP_003523997.1| formyl transferase domain protein [Sideroxydans lithotrophicus
ES-1]
gi|291583952|gb|ADE11610.1| formyl transferase domain protein [Sideroxydans lithotrophicus
ES-1]
Length = 307
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 70/301 (23%), Positives = 119/301 (39%), Gaps = 9/301 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V V L L++ + V T P +V K A+ +
Sbjct: 1 MS-KAVVFAYHNVGVRCLNVLLAHGVDVALVVTHRDNPKET----IWFESVQKLAELHGI 55
Query: 61 PALVPTKLG-QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P E EQ + D Y ++ +L K G N H SLLP++RG
Sbjct: 56 PTITPDNPNVPEVEEQIRALQPDFFFSFYYREMLKAPLLAIPKRGALNMHGSLLPKYRGR 115
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P+ AI+ G+ ETG + M + D G + + VPI N + Q+++V A+
Sbjct: 116 VPVNWAIIRGETETGATLHYMTEKPDNGDIVAQQAVPILPNDTAHEVFQKVTVAAEMALN 175
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+ + L Q + Y + +N+ +SA+ +HN +R P+PGA
Sbjct: 176 DVIPSLLAGKAQAVKQDLSKGAYFGGRKAEDGVINWSQSAQEIHNLVRAVAPPYPGATTL 235
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIA-CSQGAVRIMRLQRAGGRVLDIGDF 297
+M L+ + G+ P + A C+ G +R++R + G + F
Sbjct: 236 VMGKPMRILQTLVTKDVTTGKEHPAFYVKEGKAYAICASGVLRVVRFELDG-VEMSAAGF 294
Query: 298 L 298
Sbjct: 295 A 295
>gi|17546039|ref|NP_519441.1| hypothetical protein RSc1320 [Ralstonia solanacearum GMI1000]
gi|17428334|emb|CAD15022.1| probable uridine 5''-diphospho--(4-deoxy-4-formamido-l-arabinose)
synthase (formyltransferase) oxidoreductase protein
[Ralstonia solanacearum GMI1000]
Length = 311
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 63/287 (21%), Positives = 113/287 (39%), Gaps = 7/287 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT R V V L+ L + I V T +V AQE +
Sbjct: 1 MTRRAVVFAYHNVGVRCLRVLAARGIQIELVVTHEDSATEN----IWFGSVRATAQELGI 56
Query: 61 P-ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P G++ + + + D Y +IP R+L + G +N H SLLP++RG
Sbjct: 57 PFVTPEDARGEDLFARIAAIAPDFIFSFYYRHMIPVRLLGLARHGAFNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ E+G + +M + D G + VPI + + ++ +V +
Sbjct: 117 VPTNWAVLHGETESGATLHEMVEKPDAGYIVDQTIVPILPDDTAHEVFEKTTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + +P P +Y + R+++ R A+ V+N +RA++P
Sbjct: 177 RVLPDMIAGRIPQRPNRLEDGSYFGGRKPEDGRIDWSRPAQQVYNLVRAVAPPYPGAFTD 236
Query: 240 MIGNKHERIKLLESQLVEGEGKPG-EVINPNFTIACSQ-GAVRIMRL 284
G ++ + ++ PG V++ C GA+ I L
Sbjct: 237 AGGERYIVARARLARQSFSNLPPGLHVVDNAMFGVCGDGGAIAIHEL 283
>gi|328479828|gb|EGF48929.1| methionyl-tRNA formyltransferase [Lactobacillus rhamnosus MTCC
5462]
Length = 154
Score = 82.6 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 58/152 (38%), Positives = 85/152 (55%), Gaps = 3/152 (1%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
V +GT + L+ L++ + +V+V TQP R G R K S V + A ++P L P
Sbjct: 4 VILGTPD-CRPILEGLIAQHYDVVAVMTQPDRKVG-RKQKLAASPVKQAAVAHNIPVLQP 61
Query: 66 TK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
K G E Q ++ D+ V AYG +P + L A K+ N H SLLP++RG APIQ
Sbjct: 62 EKLSGSPELAQAIALAPDLIVTAAYGQFLPTKFLQAAKIAAVNVHGSLLPKYRGGAPIQY 121
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
+I+ GD ETG+ I++M K +D G + K+P
Sbjct: 122 SIINGDAETGVTIIEMVKKMDAGDMFAQAKLP 153
>gi|24585660|ref|NP_610107.1| CG8665 [Drosophila melanogaster]
gi|22947012|gb|AAF53994.3| CG8665 [Drosophila melanogaster]
Length = 913
Score = 82.6 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 75/321 (23%), Positives = 125/321 (38%), Gaps = 32/321 (9%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+R+ +G S FA L+ L+ S+ IV V+T P + G R + A ++
Sbjct: 4 KMRIAIIGQSNFAADVLELLLDRSNIQIVGVFTIPDK--GSR-----EDILATTATIHNI 56
Query: 61 PALVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
P ++ EQ+ S A + V+ IP ++N LG H S+LP
Sbjct: 57 PVFKFACWRRKGVALPEVLEQYKSVGATLNVLPFCSQFIPMEVINGALLGSICYHPSILP 116
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
R RGA+ I ++ GD G +I D LDTGP+ R+ + S + +
Sbjct: 117 RHRGASAISWTLIEGDEVAGFSIFWADDGLDTGPLLLTRQTNVESTDTLDTIYKRFLYPE 176
Query: 175 AHAMV-EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ A+D + P Q E G TY + K E +V ++ +
Sbjct: 177 GVKAMGVAVDMVASGTAPKIIQPEVGATYDPAMFKTENQVINLQATAEKIWNFVRGLDSV 236
Query: 234 G--AWLEMMIGNKHERIKLLESQL-VEGEGKPGEVI------------NPNFTIACSQGA 278
+ E+I+L + L G G+V+ + I + GA
Sbjct: 237 PGAIATVLHGNGTEEQIRLFGAHLYSAGPVSNGKVLRLRGLTKTAWIHSGGLLIEGTDGA 296
Query: 279 -VRIMRLQRAGGRVLDIGDFL 298
V I R++R G +V+ ++
Sbjct: 297 FVNIRRIKR-GTKVISASEWF 316
>gi|307199185|gb|EFN79872.1| 10-formyltetrahydrofolate dehydrogenase [Harpegnathos saltator]
Length = 490
Score = 82.2 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 78/317 (24%), Positives = 124/317 (39%), Gaps = 34/317 (10%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT L+V +G S FA + L + H + V+T P + G R + A+
Sbjct: 1 MTQLKVAIIGQSPFAAEVYKLLRKNGHRVTGVFTIPDK--GNR-----EDPLAITAKADK 53
Query: 60 LPALVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P + E + S D+ V+ IP ++N + H SLL
Sbjct: 54 TPVFKIKAWRNKGVLLSEVLELYKSIEVDLNVLPFCTQFIPMEVINHPRHRSICYHPSLL 113
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SV 172
PR RGA+ I ++ GDN G +I D LDTGPV + + + L
Sbjct: 114 PRHRGASAISWTLIQGDNTAGFSIFWADDGLDTGPVLLQKSCRVKPDDTVDSLYNNFLYP 173
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIEN-GITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
AM EA++ + + P+ PQ ++ K + RV++ + AE +HN IR L
Sbjct: 174 EGITAMGEAVNLVAKGIAPIIPQSKDGATYDPMLNKKEDQRVDWTKPAEEIHNFIRGLDS 233
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKP------------GEVINPNFTIACSQG-A 278
PGAW + E ++L S L + P G + I G
Sbjct: 234 TPGAWTTI----NDEEVRLFGSSLWNTDLPPNVTNKVDLAEQKGSIHQDGLLIETVDGRF 289
Query: 279 VRIMRLQRAGGRVLDIG 295
+ + R++ G + +
Sbjct: 290 INVERIRI-GTKTIHAS 305
>gi|187928284|ref|YP_001898771.1| putative formyltransferase [Ralstonia pickettii 12J]
gi|187725174|gb|ACD26339.1| formyl transferase domain protein [Ralstonia pickettii 12J]
Length = 313
Score = 82.2 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 64/284 (22%), Positives = 116/284 (40%), Gaps = 7/284 (2%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R V V L+ L + + V T +V AQE +P +
Sbjct: 8 RAVVFAYHNVGVRCLRVLAARGIQVELVVTHEDNATEN----IWFGSVRATAQELGIPYI 63
Query: 64 VPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P E+ + + + D Y +IP R+L+ K G +N H SLLP++RG PI
Sbjct: 64 TPDNANGEDLHARIAAIAPDFIFSFYYRHMIPMRLLSLAKFGAFNMHGSLLPKYRGRVPI 123
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ ETG + +M + D G + VPI + + + ++ +V + A+
Sbjct: 124 NWAVLHGETETGATLHEMVEKPDAGYIVDQTIVPILPDDTSHEVFEKATVAAEQTLWRAL 183
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ ++P P + +Y + R+++ + A+ V+N IRA++P
Sbjct: 184 PAMIAGHIPRHPNVLANGSYFGGRKPEDGRIDWSKPAQQVYNLIRAVAPPYPGAFTDASS 243
Query: 243 NKHERIKLLESQLVEGEGKPG-EVINPNFTIACSQ-GAVRIMRL 284
++ + + PG V++ C GA+ I L
Sbjct: 244 ERYVVARARLAHQTFTNLPPGLHVVDNAMFGVCGDGGAIAIHEL 287
>gi|193712515|ref|XP_001943197.1| PREDICTED: methionyl-tRNA formyltransferase, mitochondrial-like
[Acyrthosiphon pisum]
Length = 354
Score = 82.2 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 79/307 (25%), Positives = 137/307 (44%), Gaps = 18/307 (5%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
RV+F G +F+V +LQ L +S ++ ++ G V A+E L
Sbjct: 45 RVMFFGNDDFSVKSLQML-TSKMRTQTIISKVDVVTTSTGSGIN---VKSFAKEEKLDIY 100
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
L D+ VVV++G +IP++I+ LG N HASLLPRWRGAAPI
Sbjct: 101 DWPVNTTL-----LDGKYDIGVVVSFGRLIPEKIIKCFPLGMINVHASLLPRWRGAAPII 155
Query: 124 RAIMAGDNETGIAIMKMDKH-LDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
I+ GD +G+ IMK+ D G + + + L+++LS + ++++
Sbjct: 156 YTILNGDLTSGVTIMKIHPRRFDVGEIVRQHSCSVDKDETADELKKKLSDMGGRLLIDSF 215
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNF--CRSAENVHNHIRALSPFPGAWLEMM 240
+L ++ PQ E GITYA K+ K + +++ S + + +P
Sbjct: 216 KELTRSLRYAVPQSEKGITYAPKVDKTLSIIDWNVMDSNSVYNKYRALCGLWPLITTWHG 275
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQ--GAVRIMRLQRAGGRVLDI 294
K ++ + + E + +PG+++ ++ C G V I +L+ G + +
Sbjct: 276 TSVKLLKVCIYQMSNAETQLQPGDLVYDKQRQKLSVKCGGKGGYVSIEKLKIPGHKTMSG 335
Query: 295 GDFLLGC 301
DF G
Sbjct: 336 KDFFNGF 342
>gi|78066631|ref|YP_369400.1| hypothetical protein Bcep18194_A5162 [Burkholderia sp. 383]
gi|77967376|gb|ABB08756.1| putative methionyl-tRNA formyltransferase [Burkholderia sp. 383]
Length = 315
Score = 82.2 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 67/302 (22%), Positives = 111/302 (36%), Gaps = 21/302 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNP----NENIWFGSVASVATEHGI 56
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P+ + +S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 PVLTPSDPADPALRRAVSDAQPDFIFSFYYRHMLPVDLLAIAPKGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIIGQTAVPILPDDTATQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L P +Y + RV++ + A V+N +RA++P +
Sbjct: 177 RVLPALLAGEAAHLPNDLATGSYYGGRKPEDGRVDWSKPAAQVYNLVRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQL---------VEGEGKPGEVINPNFTIA-CSQG-AVRIMRL--QR 286
R + ++L + PG ++ N C A+ I+ L QR
Sbjct: 234 FTDVGGTRFVIARARLAAPGSAAAAAAADLPPGLHVSDNALFGVCGDSRALSILELWQQR 293
Query: 287 AG 288
G
Sbjct: 294 DG 295
>gi|170099706|ref|XP_001881071.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643750|gb|EDR08001.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 336
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 58/334 (17%), Positives = 118/334 (35%), Gaps = 37/334 (11%)
Query: 4 RVVFMGTSEFAVATLQALVSSSH--SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++FMG +F+ L+ L ++S + V T P + GRRG +S + +Q +LP
Sbjct: 2 KILFMGRDDFSCLVLKELYAASDLWQNILVATNPDKKVGRRGSLLSVSPLKILSQTLNLP 61
Query: 62 ALVPTKLGQEEYEQFL------------SFNADVAVVVAYGLVIPQRILNATKLGFYNGH 109
E + L + + + ++ ++ N H
Sbjct: 62 VHSIPHTKPEFRQWKLPPPFSELQMDSPNPDHLLVTASFGRILTTTQLDAFLPTRRLNVH 121
Query: 110 ASLLPRWRGAAPIQRAIMAGDNETGIAIMKM---DKHLDTGPVAFMRK--VPISSNINTA 164
SLLP +RG APIQ ++ G+ ETG+ ++ M + +D G + + P+
Sbjct: 122 PSLLPAYRGPAPIQHTLLNGEQETGVCVINMLKKKEGIDAGGIWGFTRVVCPVPKEATFT 181
Query: 165 GLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSA----- 219
LQ+ L+ +V M + L PQ + + +
Sbjct: 182 SLQETLACEGGKLLVSVMRDMRAGKASLQPQPTSSTLSHAPKISMADALLNFETMSAENI 241
Query: 220 --------ENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI----N 267
V + + + N + + +PG + +
Sbjct: 242 VQRYRAISHQVCKVSSCHDIYVPTAPILSLHNPSVWSPSSSLEPMALPTQPGSAVFHKPS 301
Query: 268 PNFTIACSQGA-VRIMRLQRAGGRVLDIGDFLLG 300
+ CS + + + R+++ G +L+ ++ G
Sbjct: 302 KALLVRCSNNSVLSVPRVKQDGKSLLETKEWWNG 335
>gi|241662857|ref|YP_002981217.1| formyltransferase [Ralstonia pickettii 12D]
gi|240864884|gb|ACS62545.1| formyl transferase domain protein [Ralstonia pickettii 12D]
Length = 313
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 64/284 (22%), Positives = 117/284 (41%), Gaps = 7/284 (2%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R V V L+ LV+ + V T +V AQE +P +
Sbjct: 8 RAVVFAYHNVGVRCLRVLVARGIQVELVVTHEDNATEN----IWFGSVRATAQELGIPYI 63
Query: 64 VPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P ++ + + + D Y +IP R+L+ K G +N H SLLP++RG PI
Sbjct: 64 TPDNANGDDLHARIAAIAPDFIFSFYYRHMIPMRLLSLAKFGAFNMHGSLLPKYRGRVPI 123
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ ETG + +M + D G + VPI + + + ++ +V + A+
Sbjct: 124 NWAVLHGETETGATLHEMVEKPDAGYIVDQTIVPILPDDTSHEVFEKATVAAEQTLWRAL 183
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ +P P + +Y + R+++ + A+ V+N +RA++P G
Sbjct: 184 PAMIAGQIPQRPNVLANGSYFGGRKPEDGRIDWSKPAQQVYNLVRAVAPPYPGAFTEAGG 243
Query: 243 NKHERIKLLESQLVEGEGKPG-EVINPNFTIACSQ-GAVRIMRL 284
++ + + PG V++ C GA+ I L
Sbjct: 244 ERYVVARARLAHQTFTNLPPGLHVVDNAMFGVCGDGGAIAIHEL 287
>gi|170757334|ref|YP_001782329.1| bifunctional polymyxin resistance protein ArnA [Clostridium
botulinum B1 str. Okra]
gi|169122546|gb|ACA46382.1| bifunctional polymyxin resistance protein ArnA [Clostridium
botulinum B1 str. Okra]
Length = 295
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 60/287 (20%), Positives = 115/287 (40%), Gaps = 11/287 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+V++G EF+ L+ ++ + +V V T+ + + L+ + +++ ++
Sbjct: 1 MRIVYIGVVEFSHICLEEIIKNKGEVVGVLTK--KRSKYNSDFCDLTPI---SEKNNIDI 55
Query: 63 -LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E E + D+ +I ILN +G H ++LP+ RG P
Sbjct: 56 KYFDNINDNENIEWIKAKKPDIIFCFGLSQLIKDEILNIAPMGVIGCHDTMLPQNRGRHP 115
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A+ G ETG M+K DTG + R + I N N L +++ L + +
Sbjct: 116 IIWALALGLKETGQTFFVMNKDADTGLILSQRSLKIEDNDNAKTLYNKINQLACEQIRDF 175
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ KL L Q + K ++ + +++ S E + N I+ P+PGA E
Sbjct: 176 LPKLINKTYDLIEQDKKLANSWRKRTRKDGIIDWRMSTEAILNLIKALTKPYPGAEFEYN 235
Query: 241 IGNKHERI-KLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMR 283
E +PG+V+ + C ++++
Sbjct: 236 GQFITIWEATKYECDKCYNNIEPGKVVKVIGDCPIVKCYDSLIKLVE 282
>gi|225629871|ref|ZP_03787777.1| methionyl-tRNA formyltransferase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225591279|gb|EEH12413.1| methionyl-tRNA formyltransferase [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 197
Score = 81.9 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 74/147 (50%), Positives = 101/147 (68%), Gaps = 2/147 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R++FMG+ FAV +L L+ S +V+VYT+ P+P+G RG K + S VH A+E ++
Sbjct: 1 MRIIFMGSPGFAVNSLSLLLKSKSEVVTVYTKAPKPSG-RGQKPMKSPVHVIAEESNIEV 59
Query: 63 LVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P E E+F +F DVAVV AYGL++P+ ILN K G N H SLLPRWRGAAP
Sbjct: 60 CTPISLKFSAEQEKFRNFKPDVAVVAAYGLILPREILNIPKYGCINIHPSLLPRWRGAAP 119
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGP 148
IQ I+AGD ETG++IM++D+ LD+GP
Sbjct: 120 IQHTILAGDQETGVSIMQLDEGLDSGP 146
>gi|196003002|ref|XP_002111368.1| hypothetical protein TRIADDRAFT_37496 [Trichoplax adhaerens]
gi|190585267|gb|EDV25335.1| hypothetical protein TRIADDRAFT_37496 [Trichoplax adhaerens]
Length = 921
Score = 81.5 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 76/313 (24%), Positives = 124/313 (39%), Gaps = 25/313 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L++ +G S F + + L + H +V V+T P AG+ + +AQ+ +
Sbjct: 21 LKLAIIGQSLFGMEVYKVLRQNGHEVVGVFTVPD-IAGK------PDPLAAQAQQDGVRV 73
Query: 63 LVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ ++ ++ AD+ V+ IP ++N K G H S+LPR
Sbjct: 74 FKYPRWRKKGQAIPEVLNEYKEVGADLNVMPFCSQFIPMDVINHPKHGSIVYHPSILPRH 133
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I IM GD + G I D LDTGP+ R + N +
Sbjct: 134 RGASAINWTIMEGDPKAGFTIFWADDGLDTGPILLQRSTELYPNDTVDTIYNRFLYPQGI 193
Query: 176 HAMVEAMDKLEQNNLPLSPQIEN-GITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
+AM A+D + + P Q E K ++N+ + A+ +HN IR PG
Sbjct: 194 NAMATAVDLVATGDAPRVTQSEEGATYDKMWKDKSVAKINWDQPAQVLHNFIRGNDKLPG 253
Query: 235 AW--------LEMMIGNKHERIKLLESQL-VEGEGKPGEVINPNFTIACSQG-AVRIMRL 284
AW K +++ +EG KP V TI S V + L
Sbjct: 254 AWGTIEGQQVTFYGSTIPMISNKPEGTEIKIEGLSKPAIVHARGLTIYGSDDQPVLVKSL 313
Query: 285 QRAGGRVLDIGDF 297
Q G+++ ++
Sbjct: 314 QFEDGKMIAASNY 326
>gi|126440083|ref|YP_001059274.1| putative formyltransferase [Burkholderia pseudomallei 668]
gi|126219576|gb|ABN83082.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Burkholderia pseudomallei 668]
Length = 315
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 70/313 (22%), Positives = 116/313 (37%), Gaps = 22/313 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P ++V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDSPTE----HIWFASVAALAAEHGI 56
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P + S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 AVITPADPAGADVRAALASAKPDFIFSFYYRHMLPVDLLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L P P + +Y + R+++ + A NV+N IRA++P +
Sbjct: 177 RVLPALLAGEAPHLPNDLSQGSYYGGRKPEDGRIDWTQPAANVYNLIRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQLVEG---------EGKPGEVINPNFTIA-CSQG-AVRIMRLQRA- 287
R + ++L + PG ++ N C AV I+ L+R
Sbjct: 234 FTDLGGTRFVIARARLAAPGTAAARAAVDLPPGLHVSDNALFGVCGDSRAVSILELRRPH 293
Query: 288 --GGRVLDIGDFL 298
G V+ F
Sbjct: 294 DGGEAVVSPAQFA 306
>gi|323176820|gb|EFZ62410.1| bifunctional polymyxin resistance protein arnA domain protein
[Escherichia coli 1180]
Length = 305
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/276 (21%), Positives = 119/276 (43%), Gaps = 11/276 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDDVNHPLWVERIAQLSPDVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ N+ Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 177 LPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVG 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQ 276
+ + GE +F A +
Sbjct: 237 NQKFTVWSS--RVHPHASKAQAGE---RDFCCATAD 267
>gi|330817208|ref|YP_004360913.1| hypothetical protein bgla_1g23300 [Burkholderia gladioli BSR3]
gi|327369601|gb|AEA60957.1| hypothetical protein bgla_1g23300 [Burkholderia gladioli BSR3]
Length = 318
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 74/313 (23%), Positives = 117/313 (37%), Gaps = 19/313 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P+ +V A+E S+
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVEVALVVTHEDSPSEN----IWFGSVASVAREHSI 56
Query: 61 PALVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P E E + D Y ++P +L G YN H SLLP++RG
Sbjct: 57 AVITPADPAGAELREAVAAAQPDFIFSFYYRHMLPVALLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLRGETETGATLHEMAAKPDAGAILGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+ L P P + +Y + R+++ + A V+N IR P+PGA+ E
Sbjct: 177 RVLPALLAGEAPHLPNDLSQGSYFGGRKPEDGRLDWSKPAAEVYNLIRAVAPPYPGAFTE 236
Query: 239 MMIGNKHERIKLLESQLVEG-----EGKPGEVINPNFTIA-CSQG-AVRIMRL--QRAGG 289
+ L + + PG ++ N C AV I+ L Q G
Sbjct: 237 LHGRRFVVARARLAAPGSPAAQAARDLPPGLHVSDNALFGVCGDSRAVSILELREQHPGR 296
Query: 290 R----VLDIGDFL 298
VL F
Sbjct: 297 PDHETVLSPAQFA 309
>gi|40714578|gb|AAR88547.1| RE12154p [Drosophila melanogaster]
Length = 913
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 76/321 (23%), Positives = 125/321 (38%), Gaps = 32/321 (9%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+R+ +G S FA L+ L+ S+ IV V+T P + G R + A ++
Sbjct: 4 KMRIAIIGQSNFAADVLELLLDRSNIQIVGVFTIPDK--GSR-----EDILATTATIHNI 56
Query: 61 PALVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
P ++ EQ+ S A + V+ IP ++N LG H S+LP
Sbjct: 57 PVFKFACWRRKGVALPEVLEQYKSVGATLNVLPFCSQFIPMEVINGALLGSICYHPSILP 116
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
R RGA+ I ++ GD G +I D LDTGP+ R+ + S + +
Sbjct: 117 RHRGASAISWTLIEGDEVAGFSIFWADDGLDTGPLLLTRQTNVESTDTLDTIYKRFLYPE 176
Query: 175 AHAMV-EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ A+D + P Q E G TY + K E +V ++ +
Sbjct: 177 GVKAMGVAVDMVASGTAPKIIQPEVGATYDPAMFKTENQVINLQATAEKIWNFVRGLDSV 236
Query: 234 G--AWLEMMIGNKHERIKLLESQL-VEGEGKPGEVI------------NPNFTIACSQGA 278
+ E+I+L + L G G+V+ + I + GA
Sbjct: 237 PGAIATVLHGNGTEEQIRLFGAHLYSAGPVSNGKVLRLRGLTKTAWIHSGGLLIEGTDGA 296
Query: 279 -VRIMRLQRAGGRVLDIGDFL 298
V I R++R G RV+ ++
Sbjct: 297 FVNIRRIKR-GTRVISASEWF 316
>gi|300813958|ref|ZP_07094257.1| methionyl-tRNA formyltransferase family protein [Peptoniphilus sp.
oral taxon 836 str. F0141]
gi|300511932|gb|EFK39133.1| methionyl-tRNA formyltransferase family protein [Peptoniphilus sp.
oral taxon 836 str. F0141]
Length = 109
Score = 80.7 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 202 YAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEG- 260
+KI+K ++F +++E + N IR L P+ GA + E IK+ ++ + G
Sbjct: 1 MQKKITKSTFNIDFSKTSEEILNLIRGLDPYYGARAKYKD----EIIKIFKAYNYDYIGI 56
Query: 261 -KPGEVINPN--FTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+PG +++ N I GA+ + LQ G + +DI FLLG +G
Sbjct: 57 EEPGTILDNNKKLIIKTGDGAISVEELQIPGKKRMDIKSFLLGHNFDKNERLG 109
>gi|302877912|ref|YP_003846476.1| formyl transferase domain-containing protein [Gallionella
capsiferriformans ES-2]
gi|302580701|gb|ADL54712.1| formyl transferase domain protein [Gallionella capsiferriformans
ES-2]
Length = 328
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 64/295 (21%), Positives = 115/295 (38%), Gaps = 7/295 (2%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
V V L L++ + V T P +V + A +P + P
Sbjct: 27 VVFAYHNVGVRCLSVLLAHGVDVKLVVTHTDNP----NENIWFDSVAELAALHGIPVITP 82
Query: 66 -TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
EQ + D Y ++ +L G N H SLLP++RG P+
Sbjct: 83 ANPNESVVVEQIRALQPDFFFSFYYREMLKAPLLAIPHRGALNMHGSLLPKYRGRVPVNW 142
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
AI+ G+ ETG + M + D G + + VPI + + Q+++V A+ +
Sbjct: 143 AIIKGETETGSTLHYMTEKPDNGDIVAQQAVPILPDDTALQVFQKVTVAAEIALNNVLPA 202
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
L Q + Y + + +++ +SA +HN IRA++P ++G
Sbjct: 203 LLAGRARAVKQDLSLGAYFGGRNAADGVIDWQQSAVQIHNLIRAVAPPYPGAATQLMGRP 262
Query: 245 HERIKLLESQLVEGEGKPGEVINPNFTIA-CSQGAVRIMRLQRAGGRVLDIGDFL 298
++ L ++ + KP + A C +G +R++R + G L +F
Sbjct: 263 MRILQTLVTKCRASKDKPAFYVKEGRAYAICGEGVLRVLRFELDG-AELSAEEFA 316
>gi|172060820|ref|YP_001808472.1| putative formyltransferase [Burkholderia ambifaria MC40-6]
gi|171993337|gb|ACB64256.1| formyl transferase domain protein [Burkholderia ambifaria MC40-6]
Length = 315
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 67/302 (22%), Positives = 111/302 (36%), Gaps = 21/302 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNP----NENIWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P + +S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 PVATPADPADPALRRAVSDAQPDFIFSFYYRHMLPVDLLAIAPRGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIIGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L P P +Y + R+++ + A V+N +RA++P +
Sbjct: 177 RVLPALLAGEAPHLPNELANGSYYGGRKPEDGRIDWSKPAAQVYNLVRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQL---------VEGEGKPGEVINPNFTIA-CSQG-AVRIMRL--QR 286
R + ++L + PG ++ N C A+ I+ L QR
Sbjct: 234 FTDVGDTRFVIARARLAAPGSAAAAAAADLPPGLHVSDNALFGVCGDSRALSILELWQQR 293
Query: 287 AG 288
G
Sbjct: 294 DG 295
>gi|134277031|ref|ZP_01763746.1| putative formyltransferase [Burkholderia pseudomallei 305]
gi|134250681|gb|EBA50760.1| putative formyltransferase [Burkholderia pseudomallei 305]
Length = 315
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 70/313 (22%), Positives = 116/313 (37%), Gaps = 22/313 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P ++V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDSPTE----HIWFASVAAVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P + S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 AVITPADPAGADVRAALASAKPDFIFSFYYRHMLPVDLLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L P P + +Y + R+++ + A NV+N IRA++P +
Sbjct: 177 RVLPALLAGEAPHLPNDLSQGSYYGGRKPEDGRIDWTQPAANVYNLIRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQLVEG---------EGKPGEVINPNFTIA-CSQG-AVRIMRLQRA- 287
R + ++L + PG ++ N C AV I+ L+R
Sbjct: 234 FTDLGGTRFVIARARLAAPGTAAARAAVDLPPGLHVSDNALFGVCGDSRAVSILELRRPH 293
Query: 288 --GGRVLDIGDFL 298
G V+ F
Sbjct: 294 DGGEAVVSPAQFA 306
>gi|115351850|ref|YP_773689.1| putative formyltransferase [Burkholderia ambifaria AMMD]
gi|115281838|gb|ABI87355.1| formyl transferase domain protein [Burkholderia ambifaria AMMD]
Length = 315
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 67/302 (22%), Positives = 111/302 (36%), Gaps = 21/302 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNP----NENIWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P P + +S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 PVATPADPTDPALRRAVSDAQPDFIFSFYYRHMLPVDLLAIAPRGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIIGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L P P +Y + R+++ + A V+N +RA++P +
Sbjct: 177 RVLPALLAGEAPHLPNELANGSYYGGRKPEDGRIDWSKPAAQVYNLVRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQL---------VEGEGKPGEVINPNFTIA-CSQG-AVRIMRL--QR 286
R + ++L + PG ++ N C A+ I+ L QR
Sbjct: 234 FTDVGGTRFVIARARLAAPGSAAAAAAADLPPGLHVSDNALFGVCGDSRALSILELWQQR 293
Query: 287 AG 288
G
Sbjct: 294 DG 295
>gi|190348295|gb|EDK40725.2| hypothetical protein PGUG_04823 [Meyerozyma guilliermondii ATCC
6260]
Length = 333
Score = 80.7 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/302 (17%), Positives = 119/302 (39%), Gaps = 20/302 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-----SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ 56
LR+ F G+ F+ +L+ L + + + T+ +P GR+ + + V +A
Sbjct: 9 PLRIAFFGSDHFSCESLKRLHQFSVQTNQVESLHLVTRSIKPTGRKLKQFIEYPVAIEAS 68
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ ++P + S+N ++A+ V++G +IP+ L + + G N H SLLP++
Sbjct: 69 KLNIPVH--RVDTSPHFHGLQSYNFNMAIAVSFGKLIPRHFLESLQFGGLNVHPSLLPKY 126
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
GA+PIQ A+M D TG+ + + G ++ IS + E +
Sbjct: 127 SGASPIQYALMNDDKYTGVTVQTLHPTKFDGGDILLQSDKISIDQEDNYTSLEKKLGELG 186
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGET----RVNFCRSAENVHNHIRALSPF 232
+ E+ P + + + N R + ++ + + +
Sbjct: 187 GSLLVQTLREKRYSDPKPLNSSYPYSYARKITPKDAEIKWSNTARQIKRKYDALGKVYTW 246
Query: 233 PGAWLE-------MMIGNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMR 283
++ + ++ + + + G +PG + + I + G + + +
Sbjct: 247 KWVEVKKKNSKEPVSELHRVILDDIRDHRDNYGLTEPGNYVFRDDRLYIKTADGTLSVNK 306
Query: 284 LQ 285
++
Sbjct: 307 IK 308
>gi|241954968|ref|XP_002420205.1| methionyl-tRNA formyltransferase, mitochondrial precursor,
putative; methionyl-tRNA transformylase, putative
[Candida dubliniensis CD36]
gi|223643546|emb|CAX42428.1| methionyl-tRNA formyltransferase, mitochondrial precursor, putative
[Candida dubliniensis CD36]
Length = 359
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 60/310 (19%), Positives = 117/310 (37%), Gaps = 28/310 (9%)
Query: 2 TLRVVFMGTSEFAVATLQALVS----SSHSI--VSVYTQPPRPAGRRGLKSVLSAVHKKA 55
LR+ F G+ F+VA+L L+ + H + V V T+ +P GR V K A
Sbjct: 26 PLRIAFFGSDNFSVASLNKLIQYQKANPHKVDSVHVITRSLKPQGRYMKTVQDLPVGKFA 85
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ L + +E + + ++ + V+YG +IP + K G N H SLLP+
Sbjct: 86 SKQGLSI-MRADTSEEITQFSKQYLFNLVIAVSYGKLIPSTFIQHCKYGGLNVHPSLLPK 144
Query: 116 WRGAAPIQRA--IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
+ G++P+Q A + + K + ++PIS N+ L ++ +
Sbjct: 145 YCGSSPLQYALLNDDKFTGCTVQTLHPTKFDHGDIIIQSPEIPISDGDNSVSLFKKFGEI 204
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+VEA+D+ N + SA ++ AL P
Sbjct: 205 GGDLLVEAIDRGLFVNPTPIKNNYAHSMAPKIPKARSQVFWDKFSARDIKRLYDALGP-- 262
Query: 234 GAWLEMMIGNKHERIKLLE--------------SQLVEGEGKPGEV--INPNFTIACSQG 277
+ + + +R ++ E + +E +PG+ + + G
Sbjct: 263 -IFTFLNVNVIRKRKQICEKKRVILSCIKEYQLTDSIEQLTQPGDFMLVEEGLLVKAKTG 321
Query: 278 AVRIMRLQRA 287
+ + +++
Sbjct: 322 GLLVEKIKMQ 331
>gi|317472519|ref|ZP_07931839.1| formyl transferase domain-containing protein [Anaerostipes sp.
3_2_56FAA]
gi|316899996|gb|EFV21990.1| formyl transferase domain-containing protein [Anaerostipes sp.
3_2_56FAA]
Length = 79
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 246 ERIKLLESQLVEGEG--KPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ +K+ ++ +V +G +PG +I +AC Q A+ + +Q +G + + + FL G
Sbjct: 9 KTLKIWDADVVPYDGGERPGTIIEVTKKQMIVACGQDALALNEIQLSGKKRMSVQAFLAG 68
Query: 301 CPVIIGCIVG 310
V G ++G
Sbjct: 69 SRVDTGTVLG 78
>gi|194878292|ref|XP_001974035.1| GG21301 [Drosophila erecta]
gi|190657222|gb|EDV54435.1| GG21301 [Drosophila erecta]
Length = 913
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 77/322 (23%), Positives = 127/322 (39%), Gaps = 32/322 (9%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+R+ +G S FA L+ L+ S+ IV V+T P + G R + A ++
Sbjct: 4 KIRIAIIGQSNFAADVLELLLERSNIQIVGVFTIPDK--GTR-----EDILATTASIHNI 56
Query: 61 PALVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
P ++ EQ+ S A + V+ IP +++ LG H S+LP
Sbjct: 57 PVFKFASWRRKGVALPEVLEQYKSVGATLNVLPFCSQFIPMEVIDGALLGSICYHPSILP 116
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNIN-TAGLQQELSVL 173
R RGA+ I ++ GD G +I D LDTGP+ R+ + ++ L
Sbjct: 117 RHRGASAISWTLIEGDEVAGFSIFWADDGLDTGPLLLTRQTNVEPTDTLDTIYKRFLYPE 176
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
AM A+D + P Q E G TY + K E +V +++ +
Sbjct: 177 GVKAMRVAVDMVASGTAPKIIQAEVGATYDPAMFKTENQVINLQASAERIWNFVRGLDSV 236
Query: 234 G--AWLEMMIGNKHERIKLLESQL-------------VEGEGKPGEVINPNFTIACSQGA 278
+ E+I+L + L + G KP + + I + GA
Sbjct: 237 PGAIATVLHENGTEEQIRLFGAHLYSAGPVSDGKVLRLRGLTKPAWIHSRGLLIEGTDGA 296
Query: 279 -VRIMRLQRAGGRVLDIGDFLL 299
V I R++R G +V+ D+
Sbjct: 297 FVNIRRIKR-GTKVISASDWFR 317
>gi|312796143|ref|YP_004029065.1| UDP-4-amino-4-deoxy-L-arabinose N-formyltransferase [Burkholderia
rhizoxinica HKI 454]
gi|312167918|emb|CBW74921.1| UDP-4-amino-4-deoxy-L-arabinose N-formyltransferase (EC 2.1.2.-)
[Burkholderia rhizoxinica HKI 454]
Length = 318
Score = 80.3 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 71/317 (22%), Positives = 119/317 (37%), Gaps = 25/317 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V L+ L++ + V T P R +V A ++ L
Sbjct: 1 MNARAVVFAYHNVGARCLRVLLARGVDVALVVTHQDNPQER----IWFESVAAVAADYGL 56
Query: 61 P-ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E E + D Y ++P +L G +N H SLLP++RG
Sbjct: 57 PAITPADPRAPELAEAVRAVQPDFLFSFYYRHMLPAGLLALAPRGAFNLHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + + + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMTAKPDAGAIVAQTPVPILPDDTASQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + L N P P +Y + R+++C A+ V+N +RA++P +
Sbjct: 177 QVLPALLAGNAPRLPNDLAAGSYFGGRRPEDGRIDWCLPAQQVYNLVRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQLVEGEGK------PG-EVINPNFTIACSQG-AVRIMRLQRAGG-- 289
ER + ++L PG +V + C G A+ I L+ G
Sbjct: 234 FTDVGGERFIVAAARLARHGAAVAAKLPPGLQVCDNALFGVCGDGRALAIRELRHVGRNA 293
Query: 290 -------RVLDIGDFLL 299
RV+D FL
Sbjct: 294 CDPTHDERVIDAATFLR 310
>gi|115913964|ref|XP_784777.2| PREDICTED: similar to Aldehyde dehydrogenase 1 family, member L2
isoform 2 [Strongylocentrotus purpuratus]
gi|115941101|ref|XP_001176706.1| PREDICTED: similar to Aldehyde dehydrogenase 1 family, member L2
isoform 2 [Strongylocentrotus purpuratus]
Length = 884
Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 76/310 (24%), Positives = 121/310 (39%), Gaps = 24/310 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S+F + L H IV V+T P +K + A+
Sbjct: 1 MKIAIIGQSQFGEEVYKLLRKDGHEIVGVFTIPD-------VKGRADPLASSAEGDGTKV 53
Query: 63 LVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ + + A++ V+ IP +++ K G H SLLPR
Sbjct: 54 FKFPRWRTKGQPIEEVVNAYKECGAELNVLPFCSQFIPMNVIDDPKHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I +M+GD + G + D LDTGP+ + V + N L
Sbjct: 114 RGASAINWTLMSGDKQAGFTVFWADDGLDTGPILLQKSVDVDPNETVDTLYNRFLYPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGET-RVNFCRSAENVHNHIRALSPFPG 234
AM EA+ + + P Q E G TY + K E ++ + +SAE +HN +R PG
Sbjct: 174 KAMGEAVQLIYEGKAPRIVQPEEGATYDKLWKKKEVAQIPWGQSAETLHNFVRGNDMIPG 233
Query: 235 AWLEMMIGNKHERIKLL------ESQLVEGEG--KPGEVINPNFTIACSQG-AVRIMRLQ 285
AW + L + VE EG P V + + G + + LQ
Sbjct: 234 AWARIDGQQVTMFGSTLLSGSTPKGTPVEIEGCDTPAIVHKNGLALFGNDGKMLNVKTLQ 293
Query: 286 RAGGRVLDIG 295
GR++ G
Sbjct: 294 FEDGRMIPAG 303
>gi|107028960|ref|YP_626055.1| hypothetical protein Bcen_6218 [Burkholderia cenocepacia AU 1054]
gi|116689882|ref|YP_835505.1| hypothetical protein Bcen2424_1861 [Burkholderia cenocepacia
HI2424]
gi|105898124|gb|ABF81082.1| formyl transferase-like protein [Burkholderia cenocepacia AU 1054]
gi|116647971|gb|ABK08612.1| formyl transferase domain protein [Burkholderia cenocepacia HI2424]
Length = 315
Score = 80.3 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 68/302 (22%), Positives = 111/302 (36%), Gaps = 21/302 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNP----NENIWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
L P + +S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 SVLTPADPADPALRRAVSDAQPDFIFSFYYRHMLPVDLLAIAPRGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIIAQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L P P +Y + RV++ + A V+N +RA++P +
Sbjct: 177 RVLPALLAGEAPHLPNDLATGSYYGGRKPEDGRVDWSKPAAQVYNLVRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQL---------VEGEGKPGEVINPNFTIA-CSQG-AVRIMRL--QR 286
R + ++L + PG ++ N C A+ I+ L QR
Sbjct: 234 FTDVDGARFVIARARLAAPGSAAAAAAADLPPGLHVSDNALFGVCGDSRALSILELRQQR 293
Query: 287 AG 288
G
Sbjct: 294 DG 295
>gi|213583915|ref|ZP_03365741.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 134
Score = 79.9 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 195 QIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQ 254
Q E +T+AEK+SK E R+++ SA + IRA +P+P +WLE+ + +K+ ++
Sbjct: 16 QNEALVTHAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEI----DGQPVKVWQAS 71
Query: 255 LVEGEGK--PGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP--VIIGC 307
++E + PG ++ +A +G + ++ LQ AG + + D L I G
Sbjct: 72 VIEDATQSLPGTILAATKQGIQVATGKGILNLLSLQPAGKKAMSAQDLLNSRREWFIPGN 131
Query: 308 IV 309
+
Sbjct: 132 RL 133
>gi|28572564|ref|NP_789344.1| methionyl-tRNA formyltransferase [Tropheryma whipplei TW08/27]
gi|28410696|emb|CAD67082.1| methionyl-tRNA formyltransferase [Tropheryma whipplei TW08/27]
Length = 319
Score = 79.9 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 75/317 (23%), Positives = 145/317 (45%), Gaps = 20/317 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKK-AQEFSL 60
+LR+V+ GTS A+ L+ + +S H++V V + + L+ V AQ + +
Sbjct: 4 SLRIVYAGTSSVALPALRCIKTSQHTLVGVL---AKRVPADLCSTDLNNVISVQAQNWQI 60
Query: 61 PALVPTKLGQEEYE-------------QFLSFNADVAVVVAYGLVIPQRILNATKLGFYN 107
P + L + + S D+ V+V+YG+++ + IL+ + G+ N
Sbjct: 61 PVIEAPILRPPKSCTKSALARYELAREKIHSLAPDIGVIVSYGVLLGEEILSIPRFGWIN 120
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQ 167
H SLLP++RGAAP+QRAIM G + +G I ++++ LD+G + ++ S N+N+
Sbjct: 121 LHFSLLPQFRGAAPVQRAIMNGLDSSGFTIFRLERELDSGAILESKRYTFSRNLNSGEEI 180
Query: 168 QELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR 227
+++ A +VE +D L+ PQ + + + E ++++ +++E + IR
Sbjct: 181 LKMAEYSAPFLVEVLDSLDSKLEAAVPQKGSVTHAPKL-TYNECQIDWTQNSEKILRLIR 239
Query: 228 ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQ 285
A +P P A+ S PGE+ ++ + + V ++ L
Sbjct: 240 AANPDPSAYFFENNKRIKVISAKQPSDCFASSLAPGELVMLDKKVFVGTADLPVELVLLH 299
Query: 286 RAGGRVLDIGDFLLGCP 302
G + + G
Sbjct: 300 PEGKNKMSGYAWWCGLR 316
>gi|300813957|ref|ZP_07094256.1| formyl transferase [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300511931|gb|EFK39132.1| formyl transferase [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 203
Score = 79.9 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 70/206 (33%), Positives = 113/206 (54%), Gaps = 4/206 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VFMGT +FA+ TL+ L S + V +Q + GR G K + V ++A + +
Sbjct: 1 MKIVFMGTPDFAIPTLEKLNEIS-DVSLVVSQVDKKKGR-GKKLLPPPVKEEAIKLGIEV 58
Query: 63 LVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + L D+ VVVAYG ++ + +L KL N HASLLP RGAAP
Sbjct: 59 FQPENINSPTSIEKLKNVQADIFVVVAYGQILSKEVLQIPKLYCINVHASLLPYLRGAAP 118
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I RAI+ G E+GI+IMKM++ LD+G VA + + + N L+ +L+ + A + +
Sbjct: 119 INRAIIDGFEESGISIMKMEEGLDSGDVALQKSL-AIKDKNAYELENDLAKMGAELIEDF 177
Query: 182 MDKLEQNNLPLSPQIENGITYAEKIS 207
+ L++ + Q + +TYA+K
Sbjct: 178 LINLDKGKIQFKEQDHSKMTYAKKNH 203
>gi|119599778|gb|EAW79372.1| aldehyde dehydrogenase 1 family, member L1, isoform CRA_c [Homo
sapiens]
Length = 333
Score = 79.9 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 64/289 (22%), Positives = 113/289 (39%), Gaps = 23/289 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
++ + ++ + A++ V+ IP I++A + G H SLLPR
Sbjct: 54 FKYSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGA+ I ++ GD + G +I D LDTG + ++ + + + L
Sbjct: 114 RGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEVLPDDTVSTLYNRFLFPEGI 173
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
A+ + + P PQ E G TY K ++N+ + AE +HN IR PGAW
Sbjct: 174 KG-MAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKINWDQPAEAIHNWIRGNDKVPGAW 232
Query: 237 LEMMIGNKHERIKLL---------ESQLVEGEGKPGEVINPNFTIACSQ 276
E L ++ + G +PG V + +
Sbjct: 233 TEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGND 281
>gi|53726056|ref|YP_103048.1| formyltransferase [Burkholderia mallei ATCC 23344]
gi|67639562|ref|ZP_00438409.1| bifunctional polymyxin resistance protein ArnA (Polymyxin
resistance protein pmrI) [Burkholderia mallei GB8 horse
4]
gi|76810125|ref|YP_333798.1| putative formyltransferase [Burkholderia pseudomallei 1710b]
gi|121600795|ref|YP_993201.1| putative formyltransferase [Burkholderia mallei SAVP1]
gi|124384607|ref|YP_001026024.1| putative formyltransferase [Burkholderia mallei NCTC 10229]
gi|126448321|ref|YP_001080708.1| putative formyltransferase [Burkholderia mallei NCTC 10247]
gi|126452558|ref|YP_001066541.1| hypothetical protein BURPS1106A_2277 [Burkholderia pseudomallei
1106a]
gi|167003858|ref|ZP_02269637.1| putative formyltransferase [Burkholderia mallei PRL-20]
gi|167902345|ref|ZP_02489550.1| hypothetical protein BpseN_08747 [Burkholderia pseudomallei NCTC
13177]
gi|167910580|ref|ZP_02497671.1| hypothetical protein Bpse112_08800 [Burkholderia pseudomallei 112]
gi|217421977|ref|ZP_03453481.1| putative formyltransferase [Burkholderia pseudomallei 576]
gi|226197278|ref|ZP_03792855.1| putative formyltransferase [Burkholderia pseudomallei Pakistan 9]
gi|237812597|ref|YP_002897048.1| bifunctional polymyxin resistance protein ArnA [Burkholderia
pseudomallei MSHR346]
gi|242317028|ref|ZP_04816044.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Burkholderia pseudomallei 1106b]
gi|254177960|ref|ZP_04884615.1| putative formyltransferase [Burkholderia mallei ATCC 10399]
gi|254179504|ref|ZP_04886103.1| putative formyltransferase [Burkholderia pseudomallei 1655]
gi|254189106|ref|ZP_04895617.1| putative formyltransferase [Burkholderia pseudomallei Pasteur
52237]
gi|254198324|ref|ZP_04904746.1| putative formyltransferase [Burkholderia pseudomallei S13]
gi|254259909|ref|ZP_04950963.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Burkholderia pseudomallei 1710a]
gi|254297383|ref|ZP_04964836.1| putative formyltransferase [Burkholderia pseudomallei 406e]
gi|254358260|ref|ZP_04974533.1| putative formyltransferase [Burkholderia mallei 2002721280]
gi|52429479|gb|AAU50072.1| formyltransferase, putative [Burkholderia mallei ATCC 23344]
gi|76579578|gb|ABA49053.1| PbgP3 protein [Burkholderia pseudomallei 1710b]
gi|121229605|gb|ABM52123.1| putative formyltransferase [Burkholderia mallei SAVP1]
gi|126226200|gb|ABN89740.1| putative formyltransferase [Burkholderia pseudomallei 1106a]
gi|126241191|gb|ABO04284.1| putative formyltransferase [Burkholderia mallei NCTC 10247]
gi|148027387|gb|EDK85408.1| putative formyltransferase [Burkholderia mallei 2002721280]
gi|157807175|gb|EDO84345.1| putative formyltransferase [Burkholderia pseudomallei 406e]
gi|157936785|gb|EDO92455.1| putative formyltransferase [Burkholderia pseudomallei Pasteur
52237]
gi|160698999|gb|EDP88969.1| putative formyltransferase [Burkholderia mallei ATCC 10399]
gi|169655065|gb|EDS87758.1| putative formyltransferase [Burkholderia pseudomallei S13]
gi|184210044|gb|EDU07087.1| putative formyltransferase [Burkholderia pseudomallei 1655]
gi|217395719|gb|EEC35737.1| putative formyltransferase [Burkholderia pseudomallei 576]
gi|225930657|gb|EEH26667.1| putative formyltransferase [Burkholderia pseudomallei Pakistan 9]
gi|237504678|gb|ACQ96996.1| bifunctional polymyxin resistance protein ArnA [Burkholderia
pseudomallei MSHR346]
gi|238520119|gb|EEP83582.1| bifunctional polymyxin resistance protein ArnA (Polymyxin
resistance protein pmrI) [Burkholderia mallei GB8 horse
4]
gi|242140267|gb|EES26669.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Burkholderia pseudomallei 1106b]
gi|243060683|gb|EES42869.1| putative formyltransferase [Burkholderia mallei PRL-20]
gi|254218598|gb|EET07982.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Burkholderia pseudomallei 1710a]
Length = 315
Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 70/313 (22%), Positives = 115/313 (36%), Gaps = 22/313 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDSPTE----HIWFGSVAAVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P + S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 AVITPADPAGADVRAALASAKPDFIFSFYYRHMLPVDLLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L P P + +Y + R+++ + A NV+N IRA++P +
Sbjct: 177 RVLPALLAGEAPHLPNDLSQGSYYGGRKPEDGRIDWTQPAANVYNLIRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQLVEG---------EGKPGEVINPNFTIA-CSQG-AVRIMRLQRA- 287
R + ++L + PG ++ N C AV I+ L+R
Sbjct: 234 FTDLGGTRFVIARARLAAPGTAAARAAVDLPPGLHVSDNALFGVCGDSRAVSILELRRPH 293
Query: 288 --GGRVLDIGDFL 298
G V+ F
Sbjct: 294 DGGEAVVSPAQFA 306
>gi|195475902|ref|XP_002090222.1| GE12917 [Drosophila yakuba]
gi|194176323|gb|EDW89934.1| GE12917 [Drosophila yakuba]
Length = 913
Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 71/322 (22%), Positives = 123/322 (38%), Gaps = 32/322 (9%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+++ +G S FA L+ L+ S+ IV V+T P + G R + A ++
Sbjct: 4 KIKIAIIGQSNFAADVLELLLERSNIQIVGVFTIPDK--GSR-----EDILATTATIHNI 56
Query: 61 PALVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
P ++ EQ+ S A + V+ IP +++ LG H S+LP
Sbjct: 57 PVFKFASWRRKGIALPEVLEQYKSVGATLNVLPFCSQFIPMEVIDGAVLGSICYHPSILP 116
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
R RGA+ I ++ GD G +I D LDTGP+ R+ + + +
Sbjct: 117 RHRGASAISWTLIEGDEVAGFSIFWADDGLDTGPLLLTRQTNLEPTDTLDTIYKRFLYPE 176
Query: 175 AHAMV-EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ A+D + P Q E G TY + K E ++ ++ +
Sbjct: 177 GVKAMGVAVDMVASGTAPKIIQAEVGATYDPAMFKTENQIINLQAPAEKIWNFVRGLDSV 236
Query: 234 G--AWLEMMIGNKHERIKLLESQLVEG----EG---------KPGEVINPNFTIACSQGA 278
+ E+I+L + L G G KP + + I + G
Sbjct: 237 PGAIATALHDNGSEEQIRLFGAHLYSGGPVSNGKVLRLRGLTKPAWIHSGGLLIEGTDGV 296
Query: 279 -VRIMRLQRAGGRVLDIGDFLL 299
V I R++R G +V+ ++
Sbjct: 297 FVNIRRIKR-GTKVISASEWFN 317
>gi|284045177|ref|YP_003395517.1| Methionyl-tRNA formyltransferase [Conexibacter woesei DSM 14684]
gi|283949398|gb|ADB52142.1| Methionyl-tRNA formyltransferase [Conexibacter woesei DSM 14684]
Length = 311
Score = 79.9 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 62/154 (40%), Positives = 87/154 (56%), Gaps = 2/154 (1%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R V++GTS FA A L+ L S H V T+P RP G RG + AV + A+ +
Sbjct: 1 MRTVYLGTSPFAAAILERLADSPHHPQLVVTRPDRPKG-RGRRLQSPAVAETARALGIAL 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
P + EE ++ A AV+V + + ++ N H SLLPRWRGAAP+
Sbjct: 60 DQPEDVNGEEARARIAAAAPDAVIVCAFGAL-IKEPLLSEHELLNVHPSLLPRWRGAAPV 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
+RAIMAGD ETG+AIM++ LD+GPV + + P
Sbjct: 119 ERAIMAGDAETGVAIMRLTAGLDSGPVCLLEREP 152
Score = 46.4 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 273 ACSQGAVRIMRLQRAGGRVLDIGDFLLGCPV 303
A A+ ++ +Q GGR + D++ G +
Sbjct: 280 AAGASALELLTVQPPGGRPMGAADYMRGRSL 310
>gi|118588501|ref|ZP_01545910.1| hypothetical protein SIAM614_24507 [Stappia aggregata IAM 12614]
gi|118439207|gb|EAV45839.1| hypothetical protein SIAM614_24507 [Stappia aggregata IAM 12614]
Length = 306
Score = 79.5 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 64/288 (22%), Positives = 122/288 (42%), Gaps = 11/288 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++VF+G E ++ L A+ ++ H V T PP +GR S + + A++ +P
Sbjct: 1 MKIVFVGAVEGSLEALAAICAAGHIPSLVVTLPPELSGRH---SDFADLAPTAEKHGVPV 57
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ G EE D+ +V+ + + +LG H S LPR RG
Sbjct: 58 HHTARSGSEETLNVLREVAPDLILVIGWSQICGPDFRAIPRLGCIGFHPSALPRLRGRGV 117
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINT-AGLQQELSVLCAHAMVE 180
I I+ G++E G + + + +D G +A + I T L + + +
Sbjct: 118 IPWTILQGESEAGATLFWLGEGVDDGAIAAQMRYEIDPETITARELYDRVRSAVSQMLPP 177
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ ++P PQ E+G++ + + +++ R A +H IRA+ P
Sbjct: 178 LLTRIRSGDIPSEPQSEDGVSICARRRPEDGLIDWTRPAAEIHRLIRAVGPPYPGAFTQT 237
Query: 241 IGNKHERIKLLESQLVEGE--GKPGEV--INPN-FTIACSQG-AVRIM 282
+ +G G PG+V ++ + FT+AC G + I+
Sbjct: 238 SNGDTLTVLRARHCPHKGRYIGLPGQVQAVDGSVFTVACGDGQCLEIL 285
>gi|297692808|ref|XP_002823726.1| PREDICTED: probable 10-formyltetrahydrofolate dehydrogenase
ALDH1L2-like [Pongo abelii]
Length = 921
Score = 79.5 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 67/311 (21%), Positives = 112/311 (36%), Gaps = 21/311 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F L H +V V+T P + + A++ P
Sbjct: 22 KLKLALIGQSLFGQEVYSHLCKEGHRVVGVFTVPDKDG-------KADPLALAAEKDGTP 74
Query: 62 ALV-PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR---WR 117
P + + + ++ L + + L + S +
Sbjct: 75 VFKLPKWRVKGKTIKEVAEAYRSVGAELNVLPFCTQFIPMDILIVQSMALSFITILLPST 134
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCAH 176
++ I R ++ GD + G ++ D LDTGP+ R + N L
Sbjct: 135 KSSAINRTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVEPNDTVDALYNRFLFPEGIK 194
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
AMVEA+ + P PQ E G TY K +++ +SAE +HN IR PGAW
Sbjct: 195 AMVEAVQLIADGKAPRIPQPEEGATYEGIQKKENAEISWDQSAEVLHNWIRGHDKVPGAW 254
Query: 237 LEMMIGNKHERIKLL--------ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQRA 287
E+ L E ++G KPG V + + G A+ + LQ
Sbjct: 255 TEINGQMVTFYGSTLLNSSVPPGEPLEIKGAKKPGLVTKNGLVLFGNDGKALMVRNLQFE 314
Query: 288 GGRVLDIGDFL 298
G+++ +
Sbjct: 315 DGKMIPASQYF 325
>gi|156398476|ref|XP_001638214.1| predicted protein [Nematostella vectensis]
gi|156225333|gb|EDO46151.1| predicted protein [Nematostella vectensis]
Length = 874
Score = 79.5 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 81/314 (25%), Positives = 130/314 (41%), Gaps = 26/314 (8%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L++ +G S+F + + L H IV V+T P +K + A+E
Sbjct: 1 MAQLKIAIIGQSQFGLEVYRNLRIKGHEIVGVFTVPD-------IKGKPDILAAGAEEDG 53
Query: 60 LPALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+ + + + + A++ V+ IP +++ K G H SLL
Sbjct: 54 VKVFKFPRWRTKGEPIAEVVDKYKACGAELNVMPFCSQFIPMNVIDFPKHGSIIYHPSLL 113
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SV 172
PR RGA+ I +M GD + G +I D LDTGP+ + + + N L
Sbjct: 114 PRHRGASAINWTLMEGDKKAGFSIFWADDGLDTGPILLQKSIQVDPNDTVDTLYNRFLYP 173
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGET-RVNFCRSAENVHNHIRALSP 231
MVEA++ + P Q E G TY + K E ++N+ ++A +HN IR
Sbjct: 174 EGIKGMVEAVELIANGKAPRITQPEEGATYDKIWKKKEVAKINWNQNAATLHNFIRGNDK 233
Query: 232 FPGAW-------LEMMIGNKHERIKLLESQLVEGEG--KPGEVINPNFTIACSQ-GAVRI 281
PGAW + + K + VE +G +P V TI S + +
Sbjct: 234 LPGAWALINGEEVTFYGSKLGPKGKTPKGCEVEIDGLDRPAIVHKDGMTIIGSDEKMLTV 293
Query: 282 MRLQRAGGRVLDIG 295
LQ AGGR+++
Sbjct: 294 KTLQLAGGRMIEAS 307
>gi|58696699|ref|ZP_00372248.1| methionyl-tRNA formyltransferase [Wolbachia endosymbiont of
Drosophila simulans]
gi|58537124|gb|EAL60236.1| methionyl-tRNA formyltransferase [Wolbachia endosymbiont of
Drosophila simulans]
Length = 256
Score = 79.5 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 77/256 (30%), Positives = 122/256 (47%), Gaps = 11/256 (4%)
Query: 48 LSAVHKKAQEFSLPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFY 106
S VH A+E ++ P E E+F +F DVAVV AYGL++P+ ILN K G
Sbjct: 2 KSPVHVIAEESNIEVCTPISLKFSAEQEKFRNFKPDVAVVAAYGLILPREILNIPKYGCI 61
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H SLLPRWRGAAPIQ I+AGD ETG++IM++D+ LD+GP+ I
Sbjct: 62 NIHPSLLPRWRGAAPIQHTILAGDQETGVSIMQLDEGLDSGPILKQ----EKFLIEKNDN 117
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+ L + + + K+ P +N + ++ + E + +
Sbjct: 118 YKTLHDKLSKLGSDLLLKVLNEIEKQLPLKQNDNDACYADKVEDYKIYASDACEVAYRKV 177
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQR 286
+A P + I +++RI++L++ + G+++N N I+ G + +Q
Sbjct: 178 KAFYP------KAFIKIENKRIRILDADFEALASEQGKIVNDNMHISLKGGTLIPKVVQM 231
Query: 287 AGGRVLDIGDFLLGCP 302
G I DF+ G
Sbjct: 232 EGRNPCSIEDFIRGLK 247
>gi|146413795|ref|XP_001482868.1| hypothetical protein PGUG_04823 [Meyerozyma guilliermondii ATCC
6260]
Length = 333
Score = 79.5 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 52/302 (17%), Positives = 117/302 (38%), Gaps = 20/302 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-----SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ 56
LR+ F G+ F+ +L+ L + + + T+ +P GR+ + + V +A
Sbjct: 9 PLRIAFFGSDHFSCESLKRLHQFLVQTNQVESLHLVTRSIKPTGRKLKQFIEYPVAIEAS 68
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ ++P + S+N ++A+ V++G +IP+ L + + G N H SLLP++
Sbjct: 69 KLNIPVH--RVDTSPHFHGLQSYNFNMAIAVSFGKLIPRHFLESLQFGGLNVHPSLLPKY 126
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
GA+PIQ A+M D TG+ + + G ++ I + E +
Sbjct: 127 SGASPIQYALMNDDKYTGVTVQTLHPTKFDGGDILLQSDKILIDQEDNYTSLEKKLGELG 186
Query: 177 AMVEAMDKLEQNNLPLSP----QIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ E+ L P + N R + ++ + + +
Sbjct: 187 GSLLVQTLREKRYLDPKPLNSLYPYSYARKITPKDAEIKWSNTARQIKRKYDALGKVYTW 246
Query: 233 PGAWLE-------MMIGNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMR 283
++ + ++ + + + G +PG + + I + G + + +
Sbjct: 247 KWVEVKKKNLKEPVSELHRVILDDIRDHRDNYGLTEPGNYVFRDDRLYIKTADGTLSVNK 306
Query: 284 LQ 285
++
Sbjct: 307 IK 308
>gi|330945260|gb|EGH46918.1| hypothetical protein PSYPI_33378 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 268
Score = 79.5 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Query: 195 QIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQ 254
Q ++ YA K++K E R+++ R A+ + +RA +P+P + E +K+L +
Sbjct: 165 QDDSLANYAHKLNKDEARLDWTRPADELERLVRAFNPWPICHSTL----NEETLKVLAAD 220
Query: 255 LVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
L EG+G PG ++ +AC Q A+R+ RLQ GG+ L+ D
Sbjct: 221 LAEGQGAPGTILGASKDGLIVACGQNALRLTRLQLPGGKPLNFTDLFN 268
>gi|195161743|ref|XP_002021721.1| GL26664 [Drosophila persimilis]
gi|194103521|gb|EDW25564.1| GL26664 [Drosophila persimilis]
Length = 913
Score = 79.5 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 70/321 (21%), Positives = 124/321 (38%), Gaps = 32/321 (9%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
LR+ +G S FA L+ L+ S+ IV V+T P + G R + A +
Sbjct: 4 KLRIAIIGQSNFAADVLELLLERSNIQIVGVFTIPDK--GSR-----EDVLATTAAAHKI 56
Query: 61 PALVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
P + ++ Q+ S A + V+ IP +++ LG H S+LP
Sbjct: 57 PVFKFSSWRRKGVALPEVLAQYKSVGATLNVLPYCSQFIPMEVIDGASLGSICYHPSILP 116
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
R RGA+ I ++ GD G +I D LDTGP+ R+ + + +
Sbjct: 117 RHRGASAISWTLIEGDEVAGFSIFWADDGLDTGPLLLTRQTNLEPTDTLDSIYKRFLYPE 176
Query: 175 AHAMV-EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ A+D + P Q E G TY + K + ++ + +
Sbjct: 177 GVKAMGVAVDMVANGTAPKITQTEIGATYDPAMFKADNQLINLQQPAERIWNFVRGLDSV 236
Query: 234 G--AWLEMMIGNKHERIKLLESQL-------------VEGEGKPGEVINPNFTIACSQGA 278
++ E+I+L + L ++G KP + I + GA
Sbjct: 237 PGAIATVLLQDGTEEQIRLFGAHLYSAGPVSNGQPLRLQGLTKPAWIHASGLLIEGTDGA 296
Query: 279 -VRIMRLQRAGGRVLDIGDFL 298
V + R++R G +V++ ++
Sbjct: 297 FVNVRRIKR-GSKVINASEWF 316
>gi|116695580|ref|YP_841156.1| putative formyltransferase [Ralstonia eutropha H16]
gi|113530079|emb|CAJ96426.1| formyl transferase [Ralstonia eutropha H16]
Length = 313
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 67/304 (22%), Positives = 113/304 (37%), Gaps = 12/304 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP- 61
+R V G L+ L + + V T RP V A E +P
Sbjct: 1 MRAVVFGYHNVGDRCLRVLHARGVEVALVITHRDRP----DENIWFRRVADTAAELGIPF 56
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ + DV Y +IP +L G +N H SLLP++RG P
Sbjct: 57 VYGEDPADPAIAQAVRDAHPDVIFSFYYRAMIPAGVLALAPGGAFNMHGSLLPKYRGRVP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG + M+ D G + VPI + + ++++V +
Sbjct: 117 VNWAVLHGETETGATLHAMEAKPDAGYIVDQTAVPILPDDTAGEVFEKVTVAAEQTLWRV 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + + P P +Y + R+++ R A V+N +R P+PGA+ ++
Sbjct: 177 LPAMIAGHTPQHPNRLAEGSYFSGRKPEDGRIDWSRPAAEVYNLVRAVAPPYPGAFTDLA 236
Query: 241 IGNKHE---RIKLLE-SQLVEGEGKPGEVINPNFTIA-CSQGAVR-IMRLQRAGGRVLDI 294
R L E + + PG ++ I C G + + RL G L
Sbjct: 237 GHRFIVAQARRPLPELALALPAGTAPGLHVHDGQIIGLCGDGGLVMVTRLLAQDGSALTP 296
Query: 295 GDFL 298
F
Sbjct: 297 QAFA 300
>gi|157127257|ref|XP_001654891.1| aldehyde dehydrogenase [Aedes aegypti]
gi|108872994|gb|EAT37219.1| aldehyde dehydrogenase [Aedes aegypti]
Length = 932
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 61/319 (19%), Positives = 120/319 (37%), Gaps = 31/319 (9%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L++ +G S FA L+ L+ H +V V+T + G R + A++ ++P
Sbjct: 25 LKIAIIGQSNFAAEVLEVLLEHHHIVVGVFTIADK--GSR-----EDILATTARQLNIPV 77
Query: 63 LVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ ++ + S A++ V+ IP +++ K G H S+LPR
Sbjct: 78 FKISAWRRKGVPIPEVLEKYKSVGANLNVLPFCSQFIPMEVIDGAKFGSICYHPSILPRH 137
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGA+ I ++ GD+ G +I D LDTGP+ R+ P+ + L +
Sbjct: 138 RGASAISWTLIEGDDTAGFSIFWADDGLDTGPILLQRQCPVYGDDTLDTLYKRFLYPEGV 197
Query: 177 AMVEA-MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI--------- 226
+ ++ + P Q E G TY + + E + + +
Sbjct: 198 TAMVEAVNMIADGTAPKITQTEIGATYDPALFREENQFIDLNQSAERIFNFIRGLDSVPG 257
Query: 227 ----RALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPG--EVINPNFTIACSQGAV- 279
+ + + L ++ V +G G V I S G +
Sbjct: 258 ALAVIIGDDGSECPVRLHGASLCGPAMLDNAKRVNFKGSAGPAFVDRDGIFITASDGQLV 317
Query: 280 RIMRLQRAGGRVLDIGDFL 298
++ R+++ G +++ +
Sbjct: 318 KVKRVKK-GSKMIQASQWF 335
>gi|294340432|emb|CAZ88813.1| putative Methionyl-tRNA formyltransferase [Thiomonas sp. 3As]
Length = 309
Score = 79.2 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 61/294 (20%), Positives = 120/294 (40%), Gaps = 20/294 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP- 61
+ V V L+ L++ + V T P P V A E +P
Sbjct: 1 MNAVVFAYHNVGVRCLKTLLARGVQVQLVVTHPDSPTET----LWFDRVADVAAEAGIPV 56
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
V + ++ + + D + ++P R+L A K+ N H SLLP++RG P
Sbjct: 57 VYVDDAVDAALIDRVAALSPDFLFSFYFRRMLPARLLAAAKIAALNMHGSLLPKYRGRVP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG + M+ D G + + VPI + + +L+V A+
Sbjct: 117 VNWAVLHGETETGATLHIMEAKPDAGDIVAQQAVPILPDDTAKEVFDKLTVAAEIALWNV 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L + +P + +Y + R+++ +SA++V+N IRA++P +
Sbjct: 177 LPQLMRGEVPRRRNDLSVGSYFGGRKPEDGRIDWNQSAQSVYNLIRAVAP---PYPGAFF 233
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINP---NFTIA-------CSQ-GAVRIMRL 284
++ R + +++ + + + IA GA+ I+ L
Sbjct: 234 DHQGRRFIVARARIASPSLRA-RIADKSTVGLHIAEGQLLARTGDGGALHIVEL 286
>gi|227536519|ref|ZP_03966568.1| conserved hypothetical protein [Sphingobacterium spiritivorum
ATCC 33300]
gi|227243596|gb|EEI93611.1| conserved hypothetical protein [Sphingobacterium spiritivorum
ATCC 33300]
Length = 52
Score = 79.2 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 30/37 (81%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPA 39
+R++FMGT +FAVA+L+AL+ S ++V+V T P +PA
Sbjct: 1 MRIIFMGTPDFAVASLKALLDSGENVVAVVTVPDKPA 37
>gi|296136197|ref|YP_003643439.1| formyl transferase domain protein [Thiomonas intermedia K12]
gi|295796319|gb|ADG31109.1| formyl transferase domain protein [Thiomonas intermedia K12]
Length = 309
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 61/294 (20%), Positives = 118/294 (40%), Gaps = 20/294 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP- 61
+ V V L+ L++ + V T P P V A E +P
Sbjct: 1 MNAVVFAYHNVGVRCLKTLLARGVQVQLVVTHPDSPTET----LWFDRVADVAAEAGIPV 56
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
V + ++ + + D + ++P R+L A K N H SLLP++RG P
Sbjct: 57 VYVDDAVDAALIDRVAALSPDFLFSFYFRRMLPARLLAAAKTAALNMHGSLLPKYRGRVP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG + M+ D G + + VPI + + +L+V A+
Sbjct: 117 VNWAVLHGETETGATLHLMEAKPDAGDIVAQQAVPILPDDTAKEVFDKLTVAAEIALWNV 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ +L + +P + +Y + R+++ +SA++V+N IRA++P +
Sbjct: 177 LPQLMRGEVPRRRNDLSVGSYFGGRKPEDGRIDWNQSAQSVYNLIRAVAP---PYPGAFF 233
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINP---NFTIA-------CSQ-GAVRIMRL 284
+ R + +++ + + + IA GA+ I+ L
Sbjct: 234 DHLGRRFIVARARIASPSLRA-RIADKSTVGLHIAEGQLLARTGDGGALHIIEL 286
>gi|195352093|ref|XP_002042549.1| GM23412 [Drosophila sechellia]
gi|194124418|gb|EDW46461.1| GM23412 [Drosophila sechellia]
Length = 913
Score = 78.8 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 72/321 (22%), Positives = 123/321 (38%), Gaps = 32/321 (9%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+R+ +G S FA L+ L+ + IV V+T P R G R + A ++
Sbjct: 4 KMRIAIIGQSNFAADVLELLLDRPNIQIVGVFTIPDR--GSR-----EDILATTAIIHNI 56
Query: 61 PALVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
P ++ EQ+ S A + V+ IP +++ LG H S+LP
Sbjct: 57 PVFKFACWRRKGVALPEVLEQYKSVGATLNVLPFCSQFIPMEVIDGALLGSICYHPSILP 116
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
R RGA+ I ++ GD G +I D LDTGP+ R+ + + +
Sbjct: 117 RHRGASAISWTLIEGDEVAGFSIFWADDGLDTGPLLLTRQTNLEPTDTLDTIYKRFLYPE 176
Query: 175 AHAMV-EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ A+D + P Q E G TY + K E +V ++ +
Sbjct: 177 GVKAMGVAVDMVASGVAPKIIQTEVGATYDPAMFKTENQVINLQATAEKIWNFVRGLDSV 236
Query: 234 G--AWLEMMIGNKHERIKLLESQL-VEGEGKPGE------------VINPNFTIACSQGA 278
+ E+I+L + L G G+ + + I + GA
Sbjct: 237 PGAIATVLHENGTEEQIRLFGAHLYSAGPVSKGKFLRLRGLTKTAWIHSGGLLIEGTDGA 296
Query: 279 -VRIMRLQRAGGRVLDIGDFL 298
V I R++R G +V++ ++
Sbjct: 297 FVNIRRIKR-GTKVINASEWF 316
>gi|34496203|ref|NP_900418.1| putative formyltransferase [Chromobacterium violaceum ATCC 12472]
gi|34102057|gb|AAQ58424.1| probable transformylase [Chromobacterium violaceum ATCC 12472]
Length = 305
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 70/301 (23%), Positives = 119/301 (39%), Gaps = 9/301 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ R V V L+AL+ + V T P +V + A+++ +
Sbjct: 1 MS-RAVVFAYHNVGVRCLKALIGRGVDVALVVTHQDNP----NENIWFHSVAQTARDYGI 55
Query: 61 PALVPTKLGQEEYE-QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P E Q + AD Y ++ +L A K G YN H SLLP++RG
Sbjct: 56 PVITPDDPNSPEVVAQVQACQADFLFSFYYRHMLKAPLLEAAKRGAYNMHGSLLPKYRGR 115
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
PI AI+ G+ ETG + +M+ D GPV VPI + + +++V +
Sbjct: 116 VPINWAIIHGETETGATLHQMNVKPDNGPVVDQMAVPILPDDTADEVFAKVTVAAEMVLW 175
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
++ L + P Q Y + R++ A +H+ +R PFPGA+ +
Sbjct: 176 RSLPGLIAGDAPHVQQDLGQGGYFGGRKPEDGRIDAQAPARRLHDFVRALARPFPGAYAD 235
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGA-VRIMRLQRAGGRVLDIGDF 297
G L Q + + + C+ G + ++ + G + L +F
Sbjct: 236 TAAGRLLLWKTLPAGQAAPADRAELRSADGRLWLHCADGGRLAVLEAELDG-QPLAADNF 294
Query: 298 L 298
Sbjct: 295 A 295
>gi|28493325|ref|NP_787486.1| methionyl-tRNA formyltransferase [Tropheryma whipplei str. Twist]
gi|28476366|gb|AAO44455.1| methionyl-tRNA formyltransferase [Tropheryma whipplei str. Twist]
Length = 334
Score = 78.8 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 75/317 (23%), Positives = 144/317 (45%), Gaps = 20/317 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKK-AQEFSL 60
+LR+V+ GTS A+ L+ + +S H++V V + + L+ V AQ + +
Sbjct: 19 SLRIVYAGTSSVALPALRCIKTSQHALVGVL---AKRVPADLCSTDLNNVISVQAQNWQI 75
Query: 61 PALVPTKLGQEEYE-------------QFLSFNADVAVVVAYGLVIPQRILNATKLGFYN 107
P + L + + S D+ V+V+YG+++ + IL+ + G+ N
Sbjct: 76 PVIEAPILRPPKSCTKSALARYELAREKIHSLAPDIGVIVSYGVLLGEEILSIPRFGWIN 135
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQ 167
H SLLP++RGAAP+QRAIM G + +G I ++++ LD+G + ++ S N+N+
Sbjct: 136 LHFSLLPQFRGAAPVQRAIMNGLDSSGFTIFRLERELDSGAILESKRYTFSRNLNSGEEI 195
Query: 168 QELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR 227
+++ A +VE +D L+ PQ + + E ++++ +++E + IR
Sbjct: 196 LKMAEYSAPFLVEVLDSLDSKLEAAVPQKGSVTHAPKLTY-NECQIDWTQNSEKILRLIR 254
Query: 228 ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQ 285
A +P P A+ S PGE+ ++ + + V ++ L
Sbjct: 255 AANPDPSAYFFENNKRIKVISAKQPSDCFASSLAPGELVMLDKKVFVGTADLPVELVLLH 314
Query: 286 RAGGRVLDIGDFLLGCP 302
G + + G
Sbjct: 315 PEGKNKMSGYAWWCGLR 331
>gi|321259381|ref|XP_003194411.1| methionyl-tRNA formyltransferase [Cryptococcus gattii WM276]
gi|317460882|gb|ADV22624.1| methionyl-tRNA formyltransferase, putative [Cryptococcus gattii
WM276]
Length = 422
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 64/334 (19%), Positives = 132/334 (39%), Gaps = 34/334 (10%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSI---VSVYTQPPRPAGRRGLKSVL----SAVHKK 54
R++F G+ EF+VA+L+A+ + + + V R GR G + A+
Sbjct: 78 PFRILFCGSDEFSVASLKAVHKAK-DVWSSIDVVVPAEREIGRGGKHAHHEKYIPALRLY 136
Query: 55 AQEFSLPA-------LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYN 107
A++ +LP L + L + + ++ + + + N
Sbjct: 137 AEQHNLPISIIPPTGLKTWSPPEPFTSSNLDSSHVLLTASFGHIIPLRLLKLFPPIQRLN 196
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHL----DTGPVAFMRKVPISSNINT 163
H SLLPRWRGAAP+Q I GD ETG+ + + ++ +A + + +
Sbjct: 197 VHPSLLPRWRGAAPVQWTIANGDEETGVTVQTLVRYALGVDAGDILARAEGIKVPHDAKY 256
Query: 164 AGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRS----- 218
L+ + +V+ + K++ + ++ Q E IT A KI+ +R+++
Sbjct: 257 EIFLPSLAEAGGNLLVDVLRKIKNGTVTITTQDERYITLAPKITHETSRIHWGDHTAELI 316
Query: 219 ---AENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI------NPN 269
+ + F +++ + + L ++ + G I +
Sbjct: 317 DRLHRGFAHQYPVWTSFLDTTAQILSLHPIQPSSLPKALYQPETVRSGTAILYKQGKSRR 376
Query: 270 FTIACS-QGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+AC+ + + ++ AG + L I ++ G P
Sbjct: 377 LFVACARNSWIEVQEIKMAGKKALGIKEWWNGLP 410
>gi|221198132|ref|ZP_03571178.1| putative formyltransferase [Burkholderia multivorans CGD2M]
gi|221208377|ref|ZP_03581380.1| putative formyltransferase [Burkholderia multivorans CGD2]
gi|221171790|gb|EEE04234.1| putative formyltransferase [Burkholderia multivorans CGD2]
gi|221182064|gb|EEE14465.1| putative formyltransferase [Burkholderia multivorans CGD2M]
Length = 315
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 70/310 (22%), Positives = 115/310 (37%), Gaps = 16/310 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNP----NENIWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P+ + +S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 PVVTPSDPADPALRRAVSDAQPDFIFSFYYRHMLPTDLLAIAPRGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+ L P P +Y + R+++ + A V+N +R P+PGA+ E
Sbjct: 177 RVLPALLAGEAPHLPNDLAAGSYYGGRKPEDGRIDWTQPAAQVYNLVRAVAPPYPGAFTE 236
Query: 239 MMIGNKHE-----RIKLLESQLVEGEGKPGEVINPNFTIA-CSQG-AVRIMRL--QRAGG 289
+ + PG ++ N C A+ I+ L QR G
Sbjct: 237 LAGTRFIVARARPAAPGSAAAAAAANLPPGLHVSDNALFGVCGDSRALSILELRQQRDGR 296
Query: 290 -RVLDIGDFL 298
V+ +F
Sbjct: 297 ETVVTPAEFA 306
>gi|256372452|ref|YP_003110276.1| Methionyl-tRNA formyltransferase [Acidimicrobium ferrooxidans DSM
10331]
gi|256009036|gb|ACU54603.1| Methionyl-tRNA formyltransferase [Acidimicrobium ferrooxidans DSM
10331]
Length = 296
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 61/302 (20%), Positives = 110/302 (36%), Gaps = 22/302 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RV+ +G++E L LV + H ++ + T+PP+ G RG + ++AQE +
Sbjct: 1 MRVLLLGSTEETARHLDGLVEAGHDVIGLVTRPPKRRG-RGGAVAGTVAARRAQELGVEV 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
E + + T + N H SLLP +RGAAP+
Sbjct: 60 HEALPPDHLGAEVCVVVAYGRLL----------PAAWLTGVPVVNVHYSLLPEFRGAAPV 109
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
+RAI+AG + +G++I++++ LD GP+ MR V I + ++ + +
Sbjct: 110 ERAILAGVDRSGVSIIRLEPELDAGPILAMRSVLIDGLRASEARRRLTDAGVSLLLGLLE 169
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + RA + + G
Sbjct: 170 QPGSLEAGVPQAGAASWAPRITSEDLRLRPAEAAIVWDRRVRLERAFCFVGRRRVIVRSG 229
Query: 243 NKHERIKLLESQLVEGEGKPGEV-INPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
ER E G V ++ + ++GA + + GGR + DF+ G
Sbjct: 230 RPLER---------EAADPLGTVQLDHGRAIVHTARGAYELGEVIPEGGRPMSGADFVRG 280
Query: 301 CP 302
Sbjct: 281 LR 282
>gi|171317886|ref|ZP_02907063.1| formyl transferase domain protein [Burkholderia ambifaria MEX-5]
gi|171096955|gb|EDT41825.1| formyl transferase domain protein [Burkholderia ambifaria MEX-5]
Length = 315
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 66/302 (21%), Positives = 110/302 (36%), Gaps = 21/302 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNP----NENIWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + +S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 AVATPADPADPALRRAVSDARPDFIFSFYYRHMLPVDLLAIAPRGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIIGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L P P +Y + R+++ + A V+N +RA++P +
Sbjct: 177 RVLPALLAGEAPHLPNDLASGSYYGGRKPEDGRIDWSKPAAQVYNLVRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQL---------VEGEGKPGEVINPNFTIA-CSQG-AVRIMRL--QR 286
R + ++L + PG ++ N C A+ I+ L QR
Sbjct: 234 FTDVAGTRFVIARARLAAPGSAAAAAAADLPPGLHVSDNALFGVCGDSRALSILELWQQR 293
Query: 287 AG 288
G
Sbjct: 294 DG 295
>gi|134295892|ref|YP_001119627.1| putative formyltransferase [Burkholderia vietnamiensis G4]
gi|134139049|gb|ABO54792.1| formyl transferase domain protein [Burkholderia vietnamiensis G4]
Length = 315
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 66/302 (21%), Positives = 112/302 (37%), Gaps = 21/302 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P+ +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNPSEN----IWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P + +S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 PVVTPADPSDPALRRAVSDARPDFIFSFYYRHMLPVDLLAIAPRGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAILGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L + P P +Y + R+++ + A V+N +RA++P +
Sbjct: 177 RVLPALLAGDAPHLPNDLASGSYYGGRKPEDGRIDWSKPAAQVYNLVRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQL---------VEGEGKPGEVINPNFTIA-CSQG-AVRIMRL--QR 286
R + ++L G ++ N C A+ I+ L QR
Sbjct: 234 FTDVGGTRFVIARARLAAPGSAAATAAANLPAGLHVSDNALFGVCGDSRALSILELWQQR 293
Query: 287 AG 288
G
Sbjct: 294 DG 295
>gi|254248026|ref|ZP_04941347.1| Formyl transferase [Burkholderia cenocepacia PC184]
gi|124872802|gb|EAY64518.1| Formyl transferase [Burkholderia cenocepacia PC184]
Length = 512
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 69/302 (22%), Positives = 112/302 (37%), Gaps = 21/302 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 198 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNP----NENIWFGSVASVAAEHGI 253
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L P + +S D Y ++P +L G YN H SLLP++RG
Sbjct: 254 PVLTPADPADPALRRAVSDAQPDFIFSFYYRHMLPVDLLAIAPRGAYNMHGSLLPKYRGR 313
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 314 VPTNWAVLNGETETGATLHEMAAKPDAGAIIAQTAVPILPDDTAAQVFDKVTVAAEQTLW 373
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L P P +Y + RV++ + A V+N +RA++P +
Sbjct: 374 RVLPALLAGEAPHLPNDLATGSYYGGRKPEDGRVDWSKPAAQVYNLVRAVAP---PYPGA 430
Query: 240 MIGNKHERIKLLESQL---------VEGEGKPGEVINPNFTIA-CSQG-AVRIMRL--QR 286
R + ++L + PG ++ N C A+ I+ L QR
Sbjct: 431 FTDVDGARFVIARARLAAPGSPAAAAAADLPPGLHVSDNALFGVCGDSRALSILELRQQR 490
Query: 287 AG 288
G
Sbjct: 491 DG 492
>gi|595404|gb|AAC43261.1| FxbA [Mycobacterium smegmatis]
gi|1092651|prf||2024335C fxbA gene
Length = 360
Score = 78.4 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 62/237 (26%), Positives = 103/237 (43%), Gaps = 3/237 (1%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
RVV G + TLQAL+ S H + V T P +V A+ + L
Sbjct: 20 RVVMFGYQTWGHRTLQALLKSRHEVCLVVTHPTSDHAY--ESIWADSVEDLARGAGIEVL 77
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+ + E E+ DV V + +P+ + + K G N H SLLP++ G +P+
Sbjct: 78 LAKRTTPELVERVRELAPDVGVANNWRTRLPRELFSIPKYGTVNLHDSLLPKFTGFSPVI 137
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
++++G +TG+ MD LDTG + R V I+ L + L + +A+D
Sbjct: 138 WSLISGAGQTGLTAHFMDDELDTGDILLQRSVEITPTSTGTSLVYDTLDLIPDVLEDALD 197
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEM 239
+E PQ + T+ K S ++ V++ A ++ IR P+P A+
Sbjct: 198 AIENGTATPVPQDLSQRTFFHKRSDRDSLVDWSWPAADIERFIRALSDPYPNAYTYF 254
>gi|161524585|ref|YP_001579597.1| putative formyltransferase [Burkholderia multivorans ATCC 17616]
gi|189350659|ref|YP_001946287.1| putative formyltransferase [Burkholderia multivorans ATCC 17616]
gi|160342014|gb|ABX15100.1| formyl transferase domain protein [Burkholderia multivorans ATCC
17616]
gi|189334681|dbj|BAG43751.1| methionyl-tRNA formyltransferase [Burkholderia multivorans ATCC
17616]
Length = 315
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 70/310 (22%), Positives = 115/310 (37%), Gaps = 16/310 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVSLVVTHEDNP----NENIWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P+ + +S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 PVVTPSDPADPALRRAVSDAQPDFIFSFYYRHMLPADLLAIAPRGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+ L P P +Y + R+++ + A V+N +R P+PGA+ E
Sbjct: 177 RVLPALLAGEAPHLPNDLAAGSYYGGRKPEDGRIDWTQPAAQVYNLVRAVAPPYPGAFTE 236
Query: 239 MMIGNKHE-----RIKLLESQLVEGEGKPGEVINPNFTIA-CSQG-AVRIMRL--QRAGG 289
+ + PG ++ N C A+ I+ L QR G
Sbjct: 237 LAGTRFIVARARPAAPGSAAAAAAANLPPGLHVSDNALFGVCGDSRALSILELRQQRDGR 296
Query: 290 -RVLDIGDFL 298
V+ +F
Sbjct: 297 ETVVTPAEFA 306
>gi|118095961|ref|XP_413901.2| PREDICTED: similar to Methionyl-tRNA formyltransferase,
mitochondrial precursor (MtFMT) [Gallus gallus]
Length = 373
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 80/317 (25%), Positives = 134/317 (42%), Gaps = 37/317 (11%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVS-------VYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
+F+GT FAVATL+AL ++ V T P + V A+E
Sbjct: 31 LFLGTDRFAVATLRALQAAREPNRGMLVSRLEVVTLP-------SHLPIELPVKSCAREL 83
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
LP + G + DV VV ++G ++ + ++ G N H S LPRWRG
Sbjct: 84 QLPVHEWPQTGPVGH-------FDVGVVASFGRLLSEDLILQFPYGVLNVHPSCLPRWRG 136
Query: 119 AAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
API ++ GD TG+ +M++ D GP+ + P+ T L+ L+ + A+
Sbjct: 137 PAPIVHTVLHGDKVTGVTVMEIRPKRFDVGPIIKQEECPVPPQCTTKELEVILAEMGANM 196
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCR----SAENVHNHIRALSPFP 233
++ + L ++ Q + G+T+A KIS ++ +N+ +H I ++ P
Sbjct: 197 LLSVLKNLPESLANKKEQPKEGVTFAPKISVAKSCINWEEQTAAQIIQLHRAIGSMFPLQ 256
Query: 234 GAW--LEMMIGNKHERIKLLESQ---LVEGEGKPGEVINPNF---TIA-CSQGAVRIMRL 284
W + + + E +L S L + PG ++ IA C +G V I +
Sbjct: 257 TLWKGTTVKLLDFVEVDSILGSADQVLSDHGAVPGSLLYHKMSQTLIARCKEGWVGIKTV 316
Query: 285 QRAGGRVLDIGDFLLGC 301
+ L DF G
Sbjct: 317 VL--KKKLTAVDFYNGY 331
>gi|167950836|ref|ZP_02537910.1| methionyl-tRNA formyltransferase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 188
Score = 78.0 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 10/122 (8%)
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLES 253
PQ + +YA K++K E+R+++ RSA + +RA +P+P A + + +++ ES
Sbjct: 72 PQDDARASYASKLTKEESRIDWQRSAVEIDRQVRAFNPWPVAQADFAG----KVMRIWES 127
Query: 254 QLVEG-EGKP-GEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCI 308
Q ++ +P G V+ +A +G +RI +LQ G R + + DFL + G +
Sbjct: 128 QPLDEQSAQPTGTVVAAGKVGIDVATGEGLLRIQKLQMPGKRAMQVADFLNAHQID-GVV 186
Query: 309 VG 310
+G
Sbjct: 187 LG 188
>gi|322801064|gb|EFZ21820.1| hypothetical protein SINV_03911 [Solenopsis invicta]
Length = 920
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 79/312 (25%), Positives = 123/312 (39%), Gaps = 25/312 (8%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L+V +G S FA + L + H + V+T P + G R + A+ +
Sbjct: 1 MAQLKVAIIGQSPFAAEVYKLLRQNGHQVTGVFTIPDK--GNR-----EDPLATTAKADN 53
Query: 60 LPALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P E E + D+ V+ IP ++N + H SLL
Sbjct: 54 TPVFKIKAWRSKGVTLPEILELYKGIEVDLNVLPFCSQFIPMEVINHPRHHSICYHPSLL 113
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SV 172
PR RGA+ I ++ GDN G +I D LDTGP+ R + N L
Sbjct: 114 PRHRGASAISWTLIQGDNTAGFSIFWADDGLDTGPILLQRSCKVEPNDTVDSLYNNFLYP 173
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAE-KISKGETRVNFCRSAENVHNHIRALSP 231
AM EA+D + + P+ PQ G TY K ++++ +SA+ +H+ IR L
Sbjct: 174 EGIKAMGEAVDLVAKGTAPMVPQPAEGATYDALLNKKELQKIDWNKSAKEIHDFIRGLDS 233
Query: 232 FPGAWLEMMIGNKHERIKLLES-------QLVEGEGKPGEVINPNFTIACSQG-AVRIMR 283
PGAW + L S + V+ E + G + I G V + R
Sbjct: 234 TPGAWTTLDGEEVRLFGSSLWSDKKPEVEKTVDLEERKGIIHQGGLLIEAVDGRLVNVER 293
Query: 284 LQRAGGRVLDIG 295
++ G + +
Sbjct: 294 IKI-GTKTIHAS 304
>gi|125984670|ref|XP_001356099.1| GA21245 [Drosophila pseudoobscura pseudoobscura]
gi|54644417|gb|EAL33158.1| GA21245 [Drosophila pseudoobscura pseudoobscura]
Length = 913
Score = 77.6 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 70/321 (21%), Positives = 124/321 (38%), Gaps = 32/321 (9%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
LR+ +G S FA L+ L+ S+ IV V+T P + G R + A +
Sbjct: 4 KLRIAIIGQSNFAADVLELLLERSNIQIVGVFTIPDK--GSR-----EDVLATTAAAHKI 56
Query: 61 PALVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
P + ++ Q+ S A + V+ IP +++ LG H S+LP
Sbjct: 57 PVFKFSSWRRKGVALPEVLAQYKSVGATLNVLPYCSQFIPMEVIDGASLGSICYHPSILP 116
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
R RGA+ I ++ GD G +I D LDTGP+ R+ + + +
Sbjct: 117 RHRGASAISWTLIEGDEVAGFSIFWADDGLDTGPLLLTRQTNLEPTDTLDSIYKRFLYPE 176
Query: 175 AHAMV-EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ A+D + P Q E G TY + K + ++ + +
Sbjct: 177 GVKAMGVAVDMVANGTAPKITQTEIGATYDPAMFKADNQLINLQQPAERIWNFVRGLDSV 236
Query: 234 G--AWLEMMIGNKHERIKLLESQL-------------VEGEGKPGEVINPNFTIACSQGA 278
++ E+I+L + L ++G KP + I + GA
Sbjct: 237 PGAIATVLLQDGTEEQIRLFGAHLYSAGPVSNGQPLRLKGLTKPAWIHTLGLLIEGTDGA 296
Query: 279 -VRIMRLQRAGGRVLDIGDFL 298
V + R++R G +V++ ++
Sbjct: 297 FVNVRRIKR-GSKVINASEWF 316
>gi|330982838|gb|EGH80941.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 251
Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/258 (22%), Positives = 108/258 (41%), Gaps = 11/258 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V + LQAL+ + + I +V+T P K+ +V + +
Sbjct: 1 MSTKAVVFAYHDIGCVGLQALLDAGYEIAAVFTHADDPKE----KTFFGSVAQMCARHGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
E+ D Y ++ +L K N H SLLPR+RG
Sbjct: 57 AVHAPEDPNHPLWVERIGKLAPDFIFSFYYRQLLGDSLLACAKKAALNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP ++ G++ETG+ + +M K D GP+ ++V IS+ L +L A +
Sbjct: 117 APANWVLVNGESETGVTLHQMVKRADAGPIVAQQRVSISATDTALTLHGKLRDAAADLLC 176
Query: 180 EAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWL 237
E + L P +PQ E+ TY + + + +++ A ++N IR P+PGA+
Sbjct: 177 ETLPLLAAQGQLPATPQDESRATYFGRRTPADGLIDWSLPATQLYNLIRAVTQPYPGAFC 236
Query: 238 EMMIGNKHERIKLLESQL 255
+ ++ + + +
Sbjct: 237 PVGDN----KLIVWAASV 250
>gi|195051069|ref|XP_001993025.1| GH13317 [Drosophila grimshawi]
gi|193900084|gb|EDV98950.1| GH13317 [Drosophila grimshawi]
Length = 913
Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 65/320 (20%), Positives = 126/320 (39%), Gaps = 32/320 (10%)
Query: 3 LRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+ +G S FA L+ L+ + S +V V+T P + G R + A ++P
Sbjct: 5 LRIAVIGQSNFAADVLEQLLENSSVKVVGVFTIPDK--GSR-----EDILATTAASHNIP 57
Query: 62 ALVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ EQ+ S A + ++ IP +++ LG H S+LPR
Sbjct: 58 VFKFASWRRKGVALPEVLEQYKSVGATLNLLPYCSQFIPMEVIDGAALGSICYHPSILPR 117
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
RGA+ I ++ GD G +I D LDTGP+ R+ + + +
Sbjct: 118 HRGASAISWTLIEGDEIAGFSIFWADDGLDTGPLLLTRQTNLEPTDTLDSIYKRFLYPEG 177
Query: 176 HAMVE-AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI-------- 226
+ A+D + + P Q E G TY + + E ++ + + +
Sbjct: 178 VKAMVLAVDMVAKGTAPKIVQTEVGATYDPAMFRAENQILNLQQSAERIWNFIRGLDSVP 237
Query: 227 -----RALSPFPGAWLEMMIGNKHERIKLLESQLVEGEG--KPGEVINPNFTIACSQGAV 279
+ + + + + + +Q ++ +G KP V I + G +
Sbjct: 238 GAIATVLQADGSEEQVRLFGAHLYSAGPVRAAQEIKLKGLPKPAWVHENGLLIEGTDGQL 297
Query: 280 -RIMRLQRAGGRVLDIGDFL 298
+ R++R G ++++ D+
Sbjct: 298 VNVRRIKR-GSKMINACDWF 316
>gi|260792555|ref|XP_002591280.1| hypothetical protein BRAFLDRAFT_216378 [Branchiostoma floridae]
gi|229276484|gb|EEN47291.1| hypothetical protein BRAFLDRAFT_216378 [Branchiostoma floridae]
Length = 337
Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 74/324 (22%), Positives = 119/324 (36%), Gaps = 48/324 (14%)
Query: 4 RVVFMGTSEFAVATLQALV------SSSHSIV---SVYTQPPRPAGRRGLKSVLSAVHKK 54
R++F G+ EF+V L+ L S+ +V V P R +
Sbjct: 17 RILFFGSDEFSVEVLRKLQTDQTRTKSAERVVEKLEVVCSPKR-----------VPIRTY 65
Query: 55 AQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
A E LP DV VV ++G +IP+RI+ LG N H SLLP
Sbjct: 66 ADEHHLPLHDWPLQRSC-------DQFDVGVVASFGFLIPKRIIRLFPLGILNIHPSLLP 118
Query: 115 RWRGAAPIQRAIMAGDN-----ETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQE 169
RWRGA+P+ I+ GD+ I + D GP+ V + + L
Sbjct: 119 RWRGASPVFHTILQGDDVTGVTIIHITPSFVVCRFDVGPILQQESVSVPDRCHAIQLGSM 178
Query: 170 LSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-- 227
L A +++ + L + Q +G+T A K+S ++ V + + + +
Sbjct: 179 LFDKGADMLLQCLRNLPEMLGNAVEQPSSGVTNAPKLSVDQSWVRWAEQSCQEIDRLCRS 238
Query: 228 ------ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQG 277
S + G +++M K L + + KPG + I C G
Sbjct: 239 VGQKLPLRSMWNGRTVKLMDIMDPTITKDLAIPVSDP--KPGSSHYHKPTNSVCIRCKDG 296
Query: 278 AVRIMRLQRAGGRVLDIGDFLLGC 301
V + + L +F G
Sbjct: 297 WVGFRSILL--KKTLTAQEFYNGY 318
>gi|324502295|gb|ADY41010.1| 10-formyltetrahydrofolate dehydrogenase [Ascaris suum]
Length = 908
Score = 77.2 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 70/323 (21%), Positives = 118/323 (36%), Gaps = 41/323 (12%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L AL + H IV VYT P + GR L + +A + +P
Sbjct: 1 MKIAIIGQSAFGADVLNALRENGHQIVVVYTIPDKN-GREDL------LALEANKLGIPV 53
Query: 63 LVPTKLG-----------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
P + E E++ A++ V+ IP I+ K H S
Sbjct: 54 QKPARWRKKGADGKLHLIPEMLEEYRKHGAELNVLPFCTQFIPIEIIEQPKYKSIIYHPS 113
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
+LP RGA+ I ++ GD G + D LDTGP+ + V + N L +
Sbjct: 114 ILPAHRGASAINWTLINGDETAGFTVFWADDGLDTGPILLQKSVKVDENDTLNSLYKRFL 173
Query: 172 VLCAHAMVEAMDKLEQN---NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRA 228
+ +L N + P+ +N+ ++ +HN IR
Sbjct: 174 YPEGVKGMAEAVELIANGKAPRIVQPEKGASYEPYITAKPELAELNWSKNQREMHNFIRG 233
Query: 229 LSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKP-------------GE--VINPNFTIA 273
PGAWL++ E++ L S + + P G+ V + +
Sbjct: 234 NDKVPGAWLKL----NGEKVTLFGSSIYKSSSMPADAIEVSVNDCPNGKVFVHSKGLLLP 289
Query: 274 CSQ-GAVRIMRLQRAGGRVLDIG 295
S V + ++ GR +
Sbjct: 290 ASDLKYVNVETVKLPDGRTIPGS 312
>gi|238027030|ref|YP_002911261.1| putative formyltransferase [Burkholderia glumae BGR1]
gi|237876224|gb|ACR28557.1| Hypothetical protein bglu_1g14080 [Burkholderia glumae BGR1]
Length = 318
Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 70/317 (22%), Positives = 117/317 (36%), Gaps = 27/317 (8%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A+E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVEVALVVTHEDSPTEN----IWFDSVAAVAREHGI 56
Query: 61 PALVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P E E + D Y ++P +L G YN H SLLP++RG
Sbjct: 57 AVITPADPAGAELREAVSAARPDFIFSFYYRHMLPVSLLALAARGAYNLHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+ L P + +Y + R+++ + A V+N IR P+PGA+ E
Sbjct: 177 RVLPALLAGEAAHLPNDLSQGSYFGGRKPEDGRIDWSKPAAEVYNLIRAVAPPYPGAFTE 236
Query: 239 MMIGNKHERIKLLESQLVEG---------EGKPG-EVINPNFTIACSQG-AVRIMRLQ-- 285
+ R + ++L + PG +V + C AV ++ L+
Sbjct: 237 LAGT----RFVVARARLAAPGSAAAQAARDLPPGLQVRDNALFGVCGDSRAVTVLELREA 292
Query: 286 ----RAGGRVLDIGDFL 298
G V+ F
Sbjct: 293 RNGGPDSGPVVSPAQFA 309
>gi|289671629|ref|ZP_06492519.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. syringae
FF5]
Length = 218
Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 5/154 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V + LQAL+ + + I +V+T P K+ +V + +
Sbjct: 1 MSTKAVVFAYHDIGCVGLQALLDAGYEIAAVFTHADDPKE----KTFFGSVAQMCARHGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
E+ D Y ++ +L K N H SLLPR+RG
Sbjct: 57 AVHAPEDPNHPLWVERIGKLAPDFIFSFYYRQLLGDSLLACAKKAALNLHGSLLPRYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMR 153
AP ++ G++ETG+ + +M K D GP+ +
Sbjct: 117 APANWVLVNGESETGVTLHQMVKRADAGPIVAQQ 150
>gi|46205445|ref|ZP_00048530.2| COG0223: Methionyl-tRNA formyltransferase [Magnetospirillum
magnetotacticum MS-1]
Length = 189
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 191 PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK----HE 246
SPQ E G+ YA KI+ E R+++ R A V +HI LSPFPGA++E +G E
Sbjct: 26 TFSPQAEEGVVYAHKITNAEARIDWSRPAVEVAHHINGLSPFPGAYVEADLGKGLGKGPE 85
Query: 247 RIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGG-RVLDIGDFLLGCPVII 305
R+K+L + EG G PG +++ T+AC GAVR++ L+RAG +FL G + +
Sbjct: 86 RVKVLRALPAEGSGPPGTLLDAACTVACGIGAVRLLELRRAGKGSSTSGEEFLRGARLTV 145
Query: 306 GC 307
G
Sbjct: 146 GD 147
>gi|2370455|emb|CAA73600.1| L-methionyl-tRNA-fMet N-formyltransferase [Rickettsia typhi]
Length = 73
Score = 76.5 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 243 NKHERIKLLESQLVEGEGK--PGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ IK+LE++ + PG VI+ IAC G +R+ +LQ+ + L+I FL G
Sbjct: 4 YNDKIIKILEAEYLNYNHHFIPGTVISNKLEIACGSGILRVTKLQQESKKALNIEAFLRG 63
Query: 301 CPVIIGCIV 309
++ I+
Sbjct: 64 TNILKDTIL 72
>gi|315056551|ref|XP_003177650.1| hypothetical protein MGYG_01716 [Arthroderma gypseum CBS 118893]
gi|311339496|gb|EFQ98698.1| hypothetical protein MGYG_01716 [Arthroderma gypseum CBS 118893]
Length = 395
Score = 76.5 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 66/335 (19%), Positives = 117/335 (34%), Gaps = 42/335 (12%)
Query: 2 TLRVVFMGTSEFAVATLQALV----SSSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ EF++A+L AL S +I S V +P +P GR + A
Sbjct: 33 PLRILFCGSDEFSIASLNALHNERVESPDTIASIDVVCRPGKPVGRAMKTIREVPIKAVA 92
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
E SLP + + ++ + V++GL IP RIL K G N H SLLP
Sbjct: 93 NELSLPIHEVDTFTKWTPPKPQGEPINLIIAVSFGLFIPPRILKGAKYGGLNVHPSLLPD 152
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS---- 171
+RGAAP+ ++AGD TGI + +D + + I
Sbjct: 153 FRGAAPLHHTLLAGDKTTGITLQTLDAAKFDHGLILDQTPAPGFPIPDPDSCDLPRLLNI 212
Query: 172 ------VLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNH 225
+ + + + N + S E+ + A KI + + + +
Sbjct: 213 VSTKGAEMLVNGIRNRVFVPPLNPIKQSTTDESVLRPANKIKPENRHIIWKLWSWDAIRR 272
Query: 226 IRALSPFPGAWLEMMIGNKHERIKLLESQLVEGE------------------GKPGEVIN 267
+ + + E + +++ G G P +
Sbjct: 273 HQTVLGALWNTAALSPTIPGEEHLVQRKRIIFGNMKAADSIRGIDAIPFTEPGVPFTFKD 332
Query: 268 -------PNFTIACSQG-AVRIMRLQRAGGRVLDI 294
+ S G +++ ++ G R+
Sbjct: 333 PANKKDEGRLLVFTSDGKPLQVEEMKVEGDRMAPA 367
>gi|332029989|gb|EGI69814.1| 10-formyltetrahydrofolate dehydrogenase [Acromyrmex echinatior]
Length = 899
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 74/299 (24%), Positives = 116/299 (38%), Gaps = 23/299 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L+V +G S FA + L + H + V+T P + G R + A+ + P
Sbjct: 4 LKVAIIGQSPFAAEVYKLLRQNGHQVTGVFTIPDK--GNR-----EDPLATTAKADNTPV 56
Query: 63 LVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
E E + D+ V+ IP ++N + H SLLPR
Sbjct: 57 FKIKAWRSKGMILPEIMEIYKGIEVDLNVLPFCSQYIPMEVINHPRHRSICYHPSLLPRH 116
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD G +I D LDTGP+ + + N L
Sbjct: 117 RGASAISWTLIQGDKTAGFSIFWADDGLDTGPILLQKSCKVEPNDTVDSLYNNFLYPEGI 176
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAE-KISKGETRVNFCRSAENVHNHIRALSPFPG 234
AM +A++ + + P PQ E G TY K ++++ + A+ +H+ IR L PG
Sbjct: 177 KAMGDAVNLVAKGTAPKVPQSEEGATYDPLLNKKELQKIDWTKPAKELHDFIRGLDSTPG 236
Query: 235 AWLEMMIGNKHERIKLLES-------QLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQ 285
AW + L S + V E + G V I G V + R++
Sbjct: 237 AWTTLDGEEVRLFGSSLWSDKQPEVEKTVNLEERKGIVHQRGLLIEAVDGQFVNVERIK 295
>gi|2370426|emb|CAA73599.1| L-methionyl-tRNA-fMet N-formyltransferase [Rickettsia canadensis]
Length = 73
Score = 76.1 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 243 NKHERIKLLESQL--VEGEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ IK+LE++ V+ PG VI+ IAC G +++ +LQ+ + L+I +FLLG
Sbjct: 4 YDDKIIKILEAEYLNVDHHFTPGTVISDKLEIACGSGILQVKKLQQESKKALNIEEFLLG 63
Query: 301 CPVIIGCIV 309
++ ++
Sbjct: 64 TRILKATVL 72
>gi|194760861|ref|XP_001962651.1| GF14331 [Drosophila ananassae]
gi|190616348|gb|EDV31872.1| GF14331 [Drosophila ananassae]
Length = 913
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 71/318 (22%), Positives = 122/318 (38%), Gaps = 32/318 (10%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
LR+ +G S FA L+ L+ S+ IV V+T P + G R + A +
Sbjct: 4 KLRIAIIGQSNFAADVLELLLERSNIEIVGVFTIPDK--GSR-----EDILATTATAHKI 56
Query: 61 PALVPTKLGQEEYE------QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
P ++ Q+ + A + V+ IP +++ LG H S+LP
Sbjct: 57 PVFKFASWRRKGVTVPEVLEQYKTVGATLNVLPYCSQFIPMEVIDGAPLGSICYHPSILP 116
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
R RGA+ I ++ GD G +I D LDTGP+ R+ + + +
Sbjct: 117 RHRGASAISWTLIEGDEVAGFSIFWADDGLDTGPLLLTRQTNLEPTDTLDTIYKRFLYPE 176
Query: 175 AHAMV-EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ A+D + + P Q E G TY + K E +V + + +
Sbjct: 177 GVKAMGVAVDMVANGSAPKITQTEVGATYDPAMFKAENQVLNLQQSAERIWNFVRGLDSV 236
Query: 234 GAW--LEMMIGNKHERIKLLESQL-------------VEGEGKPGEVINPNFTIACSQGA 278
+ E I+L + L ++G KP + + I + GA
Sbjct: 237 PGAIVTVIQPDGTEEEIRLFGAHLYSAGPVSGGQALRLKGLNKPAWIHSAGLLIEGTDGA 296
Query: 279 -VRIMRLQRAGGRVLDIG 295
V + R++R G +V++
Sbjct: 297 FVNVRRVKR-GSKVINAS 313
>gi|170051883|ref|XP_001861968.1| 10-formyltetrahydrofolate dehydrogenase [Culex quinquefasciatus]
gi|167872924|gb|EDS36307.1| 10-formyltetrahydrofolate dehydrogenase [Culex quinquefasciatus]
Length = 935
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 66/328 (20%), Positives = 125/328 (38%), Gaps = 33/328 (10%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L++ +G S FA L+ L+ H +V V+T + G R + A+++ +P
Sbjct: 28 LKIAIIGQSNFAAEVLEVLLERHHMVVGVFTIADK--GSR-----EDVLATTARQYGIPV 80
Query: 63 LVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
++ + S A++ V+ IP +++ K G H S+LPR
Sbjct: 81 FKVAAWRRKGVPIPEVLEKYQSVGANLNVLPFCSQFIPMEVIDGAKFGSICYHPSILPRH 140
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGA+ I ++ GD+ G +I D LDTGP+ ++ P+ + L +
Sbjct: 141 RGASAISWTLIEGDDTAGFSIFWADDGLDTGPILLQKQCPVVGDDTLDTLYKRFLYPEGV 200
Query: 177 AMV-EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG- 234
+ EA+D + + P PQ E G TY + + E + +
Sbjct: 201 TSMAEAVDAIAEGTAPKIPQTEIGATYDPALFREENQYINLNQPALKIFNFIRGLDSVPG 260
Query: 235 ------------AWLEMMIGNKHERIKLLESQLVEGEGKPG--EVINPNFTIACSQG-AV 279
+ + + + L ++ V +G G V I G V
Sbjct: 261 ALAIIEEEDGSESPVRLHGASLCGPAALENARPVRFKGAAGPAFVDREGIFITGVDGRLV 320
Query: 280 RIMRLQRAGGRVLDIGDFLL--GCPVII 305
++ RL++ G +++ + G ++
Sbjct: 321 KVKRLKK-GSKMIQASQWFAQVGKKIVP 347
>gi|326479057|gb|EGE03067.1| methionyl-tRNA transformylase [Trichophyton equinum CBS 127.97]
Length = 388
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 66/328 (20%), Positives = 113/328 (34%), Gaps = 36/328 (10%)
Query: 2 TLRVVFMGTSEFAVATLQALV----SSSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ EF++A+L AL S +I S V +P +P GR + A
Sbjct: 34 PLRILFCGSDEFSIASLNALYNERVESPDTIASIDVVCRPGKPVGRAMKTIREVPIKAAA 93
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
E SLP + + ++ + V++GL IP RIL K G N H SLLP
Sbjct: 94 NELSLPIHELDTFTKWTPPKPQGEPINLIIAVSFGLFIPPRILKGAKYGGLNVHPSLLPD 153
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+RGAAP+ ++AGD TG+ + +D + + P
Sbjct: 154 FRGAAPLHHTLLAGDKTTGVTLQTLDSAKFD-HGLILDQTPAPGFPIPDPDSSSTMGAEM 212
Query: 176 HAMVEAMDKLEQNNLPLSPQ---IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
P+ Q E + A KI +++ + + + +
Sbjct: 213 LINGIRNRLFVPPLNPIIKQTTSDERELRPASKIKPENRHISWSSWSWDAIRRHQIVLGA 272
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEGEGK------------------PGEVIN------- 267
+ E + +++ G K P + +
Sbjct: 273 LWSTAATSPTTPGEEHLVQRKRIIFGNMKLADSIRRTDGIPFTKPAVPFTLKDPANKRDE 332
Query: 268 PNFTIACSQG-AVRIMRLQRAGGRVLDI 294
+ S G + I ++ G R+
Sbjct: 333 GRLFVFTSDGKLLEIEEMKVEGDRMAPA 360
>gi|91203715|emb|CAJ71368.1| similar to methionyl-tRNA formyltransferase [Candidatus Kuenenia
stuttgartiensis]
Length = 307
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 57/289 (19%), Positives = 108/289 (37%), Gaps = 14/289 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQP---PRPAGRRGLKSVLSAVHKKAQE 57
++V G + V + L+ I V T + G + +V ++A +
Sbjct: 3 KKKIVVFGCQQIGVDFIDFLLTREDIEISLVVTYELPMDKTYGYK-------SVLEEATK 55
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
L + P ++ + ++ N V + Y + + +L ++G N H SLLP +R
Sbjct: 56 RGLKVINPNRITESLIQEIKEINPYVIFSIYYRKIFHRELLKIPEIGCINIHPSLLPEYR 115
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
G P A+M G+ GI I MD+ DTG + + I N L L A
Sbjct: 116 GPVPTAWALMNGEKFFGITIHHMDEGTDTGDILVQEQYEIFDNETGYELYTRTMKLGAEM 175
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ K+ + Q G Y +K+ K + A P L
Sbjct: 176 LKRNFYKILNKEIKPYKQSGIGSYYGKKLGKYTIDWQDKAEYIRNMIRVHAKPYNPAEAL 235
Query: 238 EMMIGNKHERIKLLESQ--LVEGEGKPGEVI-NPNFTIACSQGAVRIMR 283
+ + ++ + +++G GK +++ + ++C G +R+
Sbjct: 236 LLNRYVIINKATIIRDEKYVLQGAGKIVDILEDKKLIVSCVDGFLRLNE 284
>gi|156537109|ref|XP_001602871.1| PREDICTED: similar to aldehyde dehydrogenase [Nasonia vitripennis]
Length = 902
Score = 76.1 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 75/312 (24%), Positives = 118/312 (37%), Gaps = 26/312 (8%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L+V +G S FA ++L H + V+T P + + + A+ P
Sbjct: 3 KLKVAIIGQSNFAAEVYKSLKRDGHEVTGVFTIPDK-------VNREDPLAITAKADGTP 55
Query: 62 ALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
E + + S D+ V+ IP ++N K H S+LPR
Sbjct: 56 VFKIKAWRSKGLPLPEVLDLYKSIEVDLNVLPFCTQFIPMEVINHPKHRSICYHPSILPR 115
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC- 174
RGA+ I ++ GD G ++ D LDTGP+ R P+ N L
Sbjct: 116 HRGASAISWTLIEGDEVAGFSVFWADDGLDTGPILLQRSCPVKPNDTLDSLYNGFMYPEG 175
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNF--CRSAENVHNHIRALSPF 232
AM EA++ + + P PQ E G TY ++K E + +SA+ H+ IRAL
Sbjct: 176 IKAMAEAVNLVAKGTAPCVPQTEEGATYDAMLNKKELQRLDWKGKSAKQAHDFIRALDST 235
Query: 233 PGAWL--------EMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQG-AVRIMR 283
PGAW + V+ +G+P V + G + +
Sbjct: 236 PGAWTLIDGEEARLYGSSLWKGNETIPSGTAVDIDGRPAVVHETGLLMQAEDGNWLNVEV 295
Query: 284 LQRAGGRVLDIG 295
L+ G R +
Sbjct: 296 LKI-GTRTISAS 306
>gi|126643463|ref|YP_001086447.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii ATCC
17978]
Length = 234
Score = 75.7 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 71/214 (33%), Positives = 110/214 (51%), Gaps = 7/214 (3%)
Query: 103 LGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNIN 162
G N H SLLPRWRGAAPIQRAI GD+ETGI IM+M LDTG + + PI+S
Sbjct: 20 YGCLNIHGSLLPRWRGAAPIQRAIATGDDETGITIMQMAAGLDTGDMMYKTYCPITSEDT 79
Query: 163 TAGLQQELSVLCAHAMV---EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSA 219
+A L +L+ A A+ E+ + L++ Q E+ YA K+ K E R+++ +A
Sbjct: 80 SATLHDKLAAQGATAICAVLESEETLQKYLAEREVQDESLTVYAHKLVKSEARIDWSMNA 139
Query: 220 ENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQ 276
V +IRA +P+P A++++ N S + + GE+I +AC +
Sbjct: 140 VQVDRNIRAFNPWPVAFIQLDENNALRVWNSTISSQSKVNAQAGEIIAIDKQGVHVACGE 199
Query: 277 G-AVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ + +Q GG+ L+ + +G I+
Sbjct: 200 NTFICLTSVQWPGGKALNAQQIAQTQKLHVGQIL 233
>gi|195580661|ref|XP_002080153.1| GD24321 [Drosophila simulans]
gi|194192162|gb|EDX05738.1| GD24321 [Drosophila simulans]
Length = 913
Score = 75.3 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 70/321 (21%), Positives = 119/321 (37%), Gaps = 32/321 (9%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+R+ +G S FA L+ L+ + IV V+T P R G R + A ++
Sbjct: 4 KMRIAIIGQSNFAADVLELLLDRPNIQIVGVFTIPDR--GSR-----EDILATTAIIHNI 56
Query: 61 PALVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
P ++ EQ+ S A + V+ IP +++ LG H S+LP
Sbjct: 57 PVFKFACWRRKGVALPEVLEQYKSVGATLNVLPFCSQFIPMEVIDGALLGSICYHPSILP 116
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
R RGA+ I ++ GD G +I D LDTGP+ R+ + + +
Sbjct: 117 RHRGASAISWTLIEGDEVAGFSIFWADDGLDTGPLLLTRQTNLEPTDTLDTIYKRFLYPE 176
Query: 175 AHAMV-EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ A+D + P Q E G TY + K E +V ++ +
Sbjct: 177 GVKAMGVAVDMVASGVAPKIIQAEVGATYDPAMFKTENQVINLQATAEKIWNFVRGLDSV 236
Query: 234 G--AWLEMMIGNKHERIKLLESQLVE----GEGKPGE---------VINPNFTIACSQGA 278
+ E+I+L + L GK + + I + G
Sbjct: 237 PGAIATVLHENGTEEQIRLFGAHLYSAGPVSNGKALRLRGLTKTAWIHSGGLLIEGTDGV 296
Query: 279 -VRIMRLQRAGGRVLDIGDFL 298
V I R++R V++ ++
Sbjct: 297 FVNIRRIKRDTK-VINASEWF 316
>gi|328783791|ref|XP_623798.2| PREDICTED: 10-formyltetrahydrofolate dehydrogenase [Apis mellifera]
Length = 919
Score = 75.3 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 73/298 (24%), Positives = 115/298 (38%), Gaps = 32/298 (10%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M L+V +G S FA + L + H I V+T P + G R + A+ +
Sbjct: 20 MAQLKVAIIGQSNFAAEVYKLLKLNGHQITGVFTIPDK--GNR-----EDPLAITAKIDN 72
Query: 60 LPALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
P E + + D+ V+ IP ++N + H SLL
Sbjct: 73 TPVFKIKSWRSKGVTLPEVLQLYKGIEVDLNVLPFCSQFIPMEVINHPRHRSICYHPSLL 132
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SV 172
PR RGA+ I ++ GD+ G +I D LDTGP+ R ++SN L
Sbjct: 133 PRHRGASAITWTLIEGDDTAGFSIFWADDGLDTGPILLQRSCKVNSNDTLDSLYNNFLYP 192
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIEN-GITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
AM EA++ + + P+ PQ E K ++++ + A+ VH+ IR+L
Sbjct: 193 EGIKAMAEAVNLVAKGTAPMIPQTEEGATYDPMMNKKELQKIDWTKPAKQVHDFIRSLDS 252
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKP------------GEVINPNFTIACSQG 277
PGAW + E ++L S L + P G + I
Sbjct: 253 TPGAWTII----DGEEVRLFGSTLWNDDQIPEHEIEVNVENRLGIIHKDGLLIKAIDN 306
>gi|328766522|gb|EGF76576.1| hypothetical protein BATDEDRAFT_36247 [Batrachochytrium
dendrobatidis JAM81]
Length = 385
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 64/319 (20%), Positives = 130/319 (40%), Gaps = 22/319 (6%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVS---VYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+++ GT F+VA ++L++ SI+ V T P + + + + + ++ +
Sbjct: 55 NILYFGTDNFSVACFKSLLTKRESIIKNIQVVTPPDNLK-AKIVTNQEVPLKRFCKQNGI 113
Query: 61 PALVPTKLGQEEYEQFL---SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+ ++ D+AVVV++G +P+ I++ K+ N H SLLP++R
Sbjct: 114 QCVDAPPKSLAGWQLPELPSGEAYDIAVVVSFGYFLPRHIIHEFKIAAINVHPSLLPKYR 173
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMR-KVPISSNINTAGLQQELSVLCAH 176
G++PIQ I+ GDNETGI+++++ + + I +N+ L L++
Sbjct: 174 GSSPIQYTILNGDNETGISVIELSPKRFDAGRILKQTHISIPTNLYFEDLHNMLAIHGGD 233
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
A+++ ++ L++ Q E+ +TYA ++ K +N+ + +
Sbjct: 234 ALIDTIEHLDELQKHALTQDESLVTYAPRLEKSAAVINWNKQKAEQIYSLHRAISSRFPL 293
Query: 237 LEMMIGNKHERIKLLESQLVEGEGKPG-----EVINPNFTI---------ACSQGAVRIM 282
M G + I + + + G + + C G + I
Sbjct: 294 TTMFRGEICKLIDIEAPLSPATQKEIGLPDYKSTLQGSLVYLKSRSTIYCCCVDGWIGIR 353
Query: 283 RLQRAGGRVLDIGDFLLGC 301
LQ R F G
Sbjct: 354 CLQMPTKRKQHADAFNNGY 372
>gi|50286769|ref|XP_445814.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525120|emb|CAG58733.1| unnamed protein product [Candida glabrata]
Length = 371
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/321 (18%), Positives = 103/321 (32%), Gaps = 35/321 (10%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVS----VYTQPPRPAGRRGLKSVLSAVHKKAQE 57
L ++F G+ EF+ L++LV H V V ++PP+ GR+ + + AQ+
Sbjct: 19 PLNILFFGSDEFSAYALRSLVKLKHKQVIDSIQVVSRPPKWCGRKKSVLKSPEIVQYAQD 78
Query: 58 FSL--PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
L P V + + ++ + L N H SLLPR
Sbjct: 79 LRLDQPIHVDSNEEMLQLSSLCESQKIDMIIAVSFGKLIPNGLIGRVPYSLNVHPSLLPR 138
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+RG+AP+Q ++ D TG+ + + + P+ + A +
Sbjct: 139 YRGSAPLQHTLLNQDQYTGVTVQTLHPTKFDHGSIVAQSDPLPVSDLLASRPLPPLINQE 198
Query: 176 HAMVEAMDKLEQN------------NLPLSPQIENGITYAEKISKGETRVNFCRSAENVH 223
+ KL + Q + R+ N +
Sbjct: 199 DTRPPKLAKLMDQLGIVGGNLLADVLEKRTYQDPVSHIESNYEPSYAPRIKTEDKMINWN 258
Query: 224 ----------NHIRALSPFPGAWLEMMIGNKHERIKLLESQLVE---GEGKPGEVINPN- 269
+ L F L+ +R+ + + ++E G N
Sbjct: 259 DSATDLLNRLQTLGPLYTFKRVQLKSKSPLSLKRVLIHDFDVIERVISNQTCGTFTQDNH 318
Query: 270 --FTIACS-QGAVRIMRLQRA 287
TIAC A+ I +LQ
Sbjct: 319 DSITIACGRNTAILIKKLQFE 339
>gi|145593249|ref|YP_001157546.1| formyl transferase domain-containing protein [Salinispora tropica
CNB-440]
gi|145302586|gb|ABP53168.1| formyl transferase domain protein [Salinispora tropica CNB-440]
Length = 306
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 66/307 (21%), Positives = 115/307 (37%), Gaps = 20/307 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF G E L+ ++ H ++ V T P K V A E LP
Sbjct: 1 MRIVFFGYGELGAIVLRG-IAPHHEVLLVLTHP-----VEFSKLGEPDVELAAAELGLPV 54
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ + +E +V V + +P +L + G N H +LLP + G
Sbjct: 55 RYSATAREPDLHEHLRDLAPEVIVSTNWRTRVPSEVLRIPERGAVNTHDALLPAYAGFGA 114
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ AI G+ ETG+ + M + LDTGPV +V I + + + L +
Sbjct: 115 VNWAIRNGEEETGLTVHYMAEDLDTGPVITQARVKIGVHDTAGQILERLLAEYV-PVTLE 173
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMM 240
PQ G ++ +I +TR+++ SA + N +R PF AW
Sbjct: 174 ALNRVNAGYQGKPQPPEGASFYHRIGVEDTRIDWRDSATTICNLVRGQSDPFVNAWTTYR 233
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACS---QG---AVRIMRLQRAGGRV 291
+ ++ G PG ++ +A G V +++++ G
Sbjct: 234 GLPLWIKTAARPTRA--HGGTPGRIVKADYGGVVVASGGPRDGDDRGVVLLQVRTETGPP 291
Query: 292 LDIGDFL 298
+ D+
Sbjct: 292 VRALDYF 298
>gi|301632277|ref|XP_002945217.1| PREDICTED: peptide deformylase 1-like [Xenopus (Silurana)
tropicalis]
Length = 217
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 260 GKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
G+ + + +AC QG +R+ LQRAGG+ L DFL G + G ++G
Sbjct: 166 GQILSIDDSGLRVACGQGVLRLTVLQRAGGKRLPAADFLRGFALPQGLVLG 216
>gi|6225379|sp|O33508|FMT_RICAM RecName: Full=Methionyl-tRNA formyltransferase
gi|2370418|emb|CAA73593.1| L-methionyl-tRNA-fMet N-formyltransferase [Candidatus Rickettsia
amblyommii]
Length = 73
Score = 75.3 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 243 NKHERIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ IK+LE++ + + G VI+ IAC G +R+ +LQ+ + L+I +FL G
Sbjct: 4 YNDKIIKILEAEYLNADHHFTAGTVISDKLEIACGSGILRVKKLQQESKKALNIEEFLRG 63
Query: 301 CPVIIGCIV 309
++ ++
Sbjct: 64 TNILKDTVL 72
>gi|172040011|ref|YP_001799725.1| putative formyltransferase [Corynebacterium urealyticum DSM 7109]
gi|171851315|emb|CAQ04291.1| putative formyltransferase [Corynebacterium urealyticum DSM 7109]
Length = 299
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 71/296 (23%), Positives = 127/296 (42%), Gaps = 20/296 (6%)
Query: 20 ALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSF 79
A++++ H +V V T P + + +V + A E L V ++GQ+ E
Sbjct: 3 AVINAGHEVVLVVTHP--ASDHPYEQMWADSVEELASEHELQVCVTERVGQDVIEALRDA 60
Query: 80 NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMK 139
D+ V + +P + + K G N H LLP + G +PI A++ + G+ + +
Sbjct: 61 APDIIVANNWRTWLPPEVFSLAKHGALNVHDGLLPEYAGFSPILWALLNRETHVGVTVHE 120
Query: 140 MDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENG 199
MD+ LD GP+ R +P+ T L + L + A+ + Q PQ
Sbjct: 121 MDEVLDGGPIVAQRAIPVGPQDTTTDLVAKTIDLIEPLVERALSDVAQGTATAQPQDPTR 180
Query: 200 ITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMMIGNKHERIKLLESQLVEG 258
TY K + E+R++F + AE++ +RA P+P A+ E + +R+++L + + G
Sbjct: 181 ATYFHKRGEQESRIDFTQPAEDIALLVRAQSDPYPNAYFEF----RGQRVRVLSAHVSLG 236
Query: 259 E--GKPGEV---INPNFTIACSQ-------GAVRIMRLQRAGGRVLDIGDFLLGCP 302
G PG V + C A+ + R++ L +F G
Sbjct: 237 RFGGTPGRVTIPHEGGIAVVCGSPRANVPAPAIVLDRVRLDDNSELTATEFF-GHR 291
>gi|163741652|ref|ZP_02149042.1| non-ribosomal peptide synthetase [Phaeobacter gallaeciensis 2.10]
gi|161384825|gb|EDQ09204.1| non-ribosomal peptide synthetase [Phaeobacter gallaeciensis 2.10]
Length = 1544
Score = 74.9 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 62/315 (19%), Positives = 111/315 (35%), Gaps = 37/315 (11%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
+ +G VA L++ HSI +V T + A R K A + L L
Sbjct: 7 IVLGNESLLVACADTLLARGHSIAAVVT---KDAEIR----------KWAADKGLSVLED 53
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
+ + D + +A +IP +L G N H LPR+ G A
Sbjct: 54 ARDFG--------GSVDWLLSIANLEIIPDSVLARAANGGVNFHDGPLPRYAGLNTPNWA 105
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
++ G E GI ++ +D G + R I+ + L + + + + +L
Sbjct: 106 LIEGATEYGITWHMIEGGVDEGDILAQRLFAIAEDETAYSLNAKCYAAAMDSFGDVLGQL 165
Query: 186 EQNNLPLSPQIENGITYAEKISKGE--------TRVNFCRSAENVHNHIRALSPFPGAWL 237
E L Q + + ++ E + +P A +
Sbjct: 166 ETGTLARQAQDFSTRKLYTRANRPEAGALLDLAQPATDLHRLIRALDFNGYWNPLCAAKV 225
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDI 294
++ + + +++ EG G PG V++ +AC GA+R+ L + GR +
Sbjct: 226 QLSANSGVPIALIGTAEIAEGSGVPGTVLSVDAKTVILACGDGALRLGGLHYSDGRPIRA 285
Query: 295 GDFLLGCPVIIGCIV 309
D V G I+
Sbjct: 286 TD-----HVKTGDIL 295
>gi|330000588|ref|ZP_08303735.1| formyl transferase [Klebsiella sp. MS 92-3]
gi|328537982|gb|EGF64157.1| formyl transferase [Klebsiella sp. MS 92-3]
Length = 165
Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 5/152 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +Q+L+ + + I +++T P P G +V + A E +P
Sbjct: 1 MKAVVFAYHDMGCTGIQSLLDAGYDIAAIFTHPDNP----GENHFFGSVARLAAEQGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ DV Y ++ ILN G +N H SLLP++RG AP
Sbjct: 57 WAPEDVNHPLWIERIREMKPDVLFSFYYRNLLGDEILNLAPKGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMR 153
+ ++ G++ETG+ + +M D G + +
Sbjct: 117 LNWVLVNGESETGVTLHRMVNRADAGDIVAQQ 148
>gi|6225387|sp|O33544|FMT_RICRI RecName: Full=Methionyl-tRNA formyltransferase
gi|2370443|emb|CAA73592.1| L-methionyl-tRNA-fMet N-formyltransferase [Rickettsia rickettsii]
Length = 73
Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 243 NKHERIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ IK+LE++ + + G VI+ IAC G +R+ +LQ+ + L I +FL G
Sbjct: 4 YNDKIIKILEAEYLNADHHFTSGTVISDKLEIACGSGILRVKKLQQESKKALSIEEFLRG 63
Query: 301 CPVIIGCIV 309
++ ++
Sbjct: 64 TNILKDTVL 72
>gi|68488581|ref|XP_711866.1| hypothetical protein CaO19.4418 [Candida albicans SC5314]
gi|68488622|ref|XP_723606.1| hypothetical protein CaO19.11896 [Candida albicans SC5314]
gi|46433188|gb|EAK92638.1| hypothetical protein CaO19.11896 [Candida albicans SC5314]
gi|46433209|gb|EAK92658.1| hypothetical protein CaO19.4418 [Candida albicans SC5314]
Length = 359
Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 61/310 (19%), Positives = 117/310 (37%), Gaps = 28/310 (9%)
Query: 2 TLRVVFMGTSEFAVATLQALV----SSSHSI--VSVYTQPPRPAGRRGLKSVLSAVHKKA 55
L++ F G+ F+VA+L L+ + + V V T+ +P GR V K A
Sbjct: 26 PLKIAFFGSDNFSVASLNKLIQYQKKNPDKVNRVHVITRSLKPQGRYMKTVQDLPVGKFA 85
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ L + QE + + ++ + V+YG +IP + K G N H SLLP+
Sbjct: 86 SQQGLSI-MRADTSQEITQLSEQYLFNLVIAVSYGRLIPSTFIQHCKYGGLNVHPSLLPK 144
Query: 116 WRGAAPIQRA--IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
+ G++P+Q A + + K + ++PIS + N+ L ++ +
Sbjct: 145 YSGSSPLQYALLNDDKFTGCTVQTLHPTKFDHGDIIIQSSEIPISDDDNSVSLFKKFGEI 204
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+V+++D+ N + SA + AL P
Sbjct: 205 GGDLLVKSIDQGLFVNPTPIENNYTRSMAPKIPKAKSQVFWNKYSAREIKRLYDALGP-- 262
Query: 234 GAWLEMMIGNKHERIKLLESQLV--------------EGEGKPGEV--INPNFTIACSQG 277
+ + + +R ++ E Q V E +PG+ + + +G
Sbjct: 263 -IFTFLNVNVIRKRKQICEKQRVILSCVKEYQLTDSFEQLKEPGDFMLVEEGLLVKAKKG 321
Query: 278 AVRIMRLQRA 287
V + R++
Sbjct: 322 GVLVERIKMQ 331
>gi|195443410|ref|XP_002069410.1| GK18741 [Drosophila willistoni]
gi|194165495|gb|EDW80396.1| GK18741 [Drosophila willistoni]
Length = 918
Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 71/324 (21%), Positives = 121/324 (37%), Gaps = 35/324 (10%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
LR+ +G S FA L+ + S+ IV V+T P + G R + A+ +
Sbjct: 4 KLRIAIIGQSNFASDVLEIFLERSNIEIVGVFTIPDK--GNR-----EDILATTAKAHQI 56
Query: 61 PALVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
P ++ EQ+ S A++ V+ IP +++ LG H S+LP
Sbjct: 57 PVFKFASWRRKGIAIPEVLEQYASVGANLNVLPYCSQFIPMEVIDGAALGSICYHPSILP 116
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
R RGA+ I ++ GD G +I D LDTGP+ R+ + + +
Sbjct: 117 RHRGASAISWTLIEGDEVAGFSIFWADDGLDTGPLLLTRQTNLEPTDTLDTIYKRFLYPE 176
Query: 175 AHAMV-EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI------- 226
+ A+D + + Q E G TY + K E +V +
Sbjct: 177 GVKAMGVAVDLVAKGEAYKITQTEVGATYDPAMFKIENQVINLGQTAVRIWNFIRGLDSV 236
Query: 227 ---------RALSPFPGAWLEMMIGNKHERIKLLESQLVEGEG--KPGEVINPNFTIACS 275
+ + + + + +Q + +G KP V I +
Sbjct: 237 PGAIATVVLNTGDEVVEEQVRLFGAHLYSAGPVSNAQPLRLKGLSKPALVHEGGLLIEGT 296
Query: 276 QGA-VRIMRLQRAGGRVLDIGDFL 298
GA V + RL+R G +V+ D+
Sbjct: 297 DGAFVNVRRLKR-GSKVIAASDWF 319
>gi|73537808|ref|YP_298175.1| hypothetical protein Reut_B3975 [Ralstonia eutropha JMP134]
gi|72121145|gb|AAZ63331.1| Formyl transferase, N-terminal:Formyl transferase, C-terminal
[Ralstonia eutropha JMP134]
Length = 311
Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/288 (22%), Positives = 113/288 (39%), Gaps = 10/288 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R V G L+ L + + V T R V A E +P
Sbjct: 1 MRAVVFGYHNVGDRCLRVLHARGVDVALVVTHRDRA----DENIWFRRVADTATELGIPF 56
Query: 63 LV-PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ + + DV Y +IP +L G +N H SLLP++RG P
Sbjct: 57 IYGEDPADPAIAQAVRDASPDVIFSFYYRSMIPASVLALAPQGAFNMHGSLLPKYRGRVP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG + M+ D G + VPI + + ++++V + A
Sbjct: 117 VNWAVLHGETETGATLHAMEAKPDAGYIVDQTAVPILPDDTAGEVFEKVTVAAEQTLWRA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + N P P + +Y + R+++ R A V+N IR P+PGA+ ++
Sbjct: 177 LPAMMAGNTPQHPNVLAQGSYFSGRRPEDGRIDWSRPAAEVYNLIRAVAPPYPGAFTDIA 236
Query: 241 IGNKH--ERIKLLESQLVEGEGKPGEVINPNFTIA-CSQ-GAVRIMRL 284
+ + L + + +PG ++ I C G VRI L
Sbjct: 237 GQRFVVAQARRPLSAPALPTGWRPGLHVSQGQIIGLCGDGGQVRIDTL 284
>gi|39653977|gb|AAR29588.1| hypothetical protein [Flavobacterium psychrophilum]
Length = 224
Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 65/214 (30%), Positives = 116/214 (54%), Gaps = 5/214 (2%)
Query: 92 VIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAF 151
++P+ + +LG +N HASLLP +RGAAPI AI+ G+ +TG+ +D +DTG +
Sbjct: 1 MLPKVVWAMPELGTFNLHASLLPNYRGAAPINWAIINGETKTGVTTFFIDDKIDTGAMIL 60
Query: 152 MRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQ-IENGITYAEKISKGE 210
+++ IS + N L +L VL A++E +DK+ N+ + Q + I A K+ +
Sbjct: 61 SKELEISESENLGDLHDKLMVLGCDAVLETLDKIAHGNVVTTIQEDTSDIKTAYKLDRDN 120
Query: 211 TRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLES--QLVEGEGKPGEVI-- 266
+++F ++ V+N IR LSP+P AW ++ IK+ ++ +++ + G VI
Sbjct: 121 CKIDFTKNITEVYNLIRGLSPYPSAWCNFRDADQEFSIKIYDTKQEVLLHDYTIGSVITT 180
Query: 267 NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
IA G ++++ LQ G + + + L G
Sbjct: 181 KKEIKIAVLGGFIQVLSLQFPGKKKMMAHELLNG 214
>gi|296141364|ref|YP_003648607.1| formyl transferase [Tsukamurella paurometabola DSM 20162]
gi|296029498|gb|ADG80268.1| formyl transferase domain protein [Tsukamurella paurometabola DSM
20162]
Length = 311
Score = 74.5 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 109/278 (39%), Gaps = 10/278 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + TL A++ + H + T P + + +V + A + +P
Sbjct: 1 MRVVTFGFQTWGHRTLSAVLDAGHEVTLAVTHP--VSNNPYEQMWNDSVEQLATDRGVPV 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + E D+ V + +P+ I + +LG N H SLLP++ G +P+
Sbjct: 59 FLAKRPDAGLLEAVTEAQPDIIVANNWRTWLPKSIYSLPRLGTLNIHDSLLPKYAGFSPL 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ G+ MD+ LDTGP+ + + T L L + ++
Sbjct: 119 IWALINGETHVGVTAHLMDEGLDTGPIIAQESIAVGPADRTVDLFHRTVDLIGPLVARSL 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+LE PQ TY K S ++ +++ A+ + IRA +
Sbjct: 179 RELEAGTAVAVPQDPAAATYFHKRSDDDSCIDWTWPADAIERLIRAQ---SDPYPNAHTV 235
Query: 243 NKHERIKLLESQLVEGE--GKPGEV---INPNFTIACS 275
+ ER+ + + + G PG V +
Sbjct: 236 FRGERLAITAASVSTKRYGGTPGRVCVPDGDGIAVVAG 273
>gi|6225388|sp|O33575|FMT_RICSI RecName: Full=Methionyl-tRNA formyltransferase
gi|2370449|emb|CAA73591.1| L-methionyl-tRNA-fMet N-formyltransferase [Rickettsia sibirica]
Length = 73
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 243 NKHERIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ IK+LE++ + + G VI+ IAC G +R+ +LQ+ + L+I +FL G
Sbjct: 4 YNDKIIKILEAEYLNADHHCTSGTVISDKLEIACGSGILRVKKLQQESKKALNIEEFLRG 63
Query: 301 CPVIIGCIV 309
++ ++
Sbjct: 64 TNILKDTVL 72
>gi|6225385|sp|O33543|FMT_RICPA RecName: Full=Methionyl-tRNA formyltransferase
gi|2370424|emb|CAA73589.1| L-methionyl-tRNA-fMet N-formyltransferase [Rickettsia conorii]
gi|2370441|emb|CAA73590.1| L-methionyl-tRNA-fMet N-formyltransferase [Rickettsia parkeri]
Length = 73
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 243 NKHERIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ IK+LE++ + + G VI+ IAC G +R+ +LQ+ + L+I +FL G
Sbjct: 4 YNDKIIKILEAEYLNADHHFTSGTVISDKLEIACGSGILRVKKLQQESKKALNIEEFLRG 63
Query: 301 CPVIIGCIV 309
++ ++
Sbjct: 64 TNILKDTVL 72
>gi|259417468|ref|ZP_05741387.1| non-ribosomal peptide synthetase [Silicibacter sp. TrichCH4B]
gi|259346374|gb|EEW58188.1| non-ribosomal peptide synthetase [Silicibacter sp. TrichCH4B]
Length = 1522
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 62/316 (19%), Positives = 111/316 (35%), Gaps = 33/316 (10%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT V +G + +AL++ H I +V + + + A L
Sbjct: 1 MTFSTVVIGNESLLIGCSEALLTRGHEIRAVVS-------------DNAEITSWAASKGL 47
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L + D + +A V+P+ ++ + G N H LP G
Sbjct: 48 QVLAAPSDI--------EGDFDWLLSIANLRVLPEAVIAKARRGAVNFHDGPLPERAGLN 99
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
AI+ G E GI ++ +D G + R+ +S + L + + E
Sbjct: 100 TPNWAILEGVAEHGITWHMIEGGVDEGDILAQRRFAVSEDETAFSLNSKCYGAALDSFAE 159
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGET----RVNFCRSAENVHNHIRALSPFPGAW 236
+D+LE L PQ + Y + + E R + + + +
Sbjct: 160 VLDQLESGTLNRQPQDLSQRHYHARADRPEAAGALRFDRPVAELLRVVRGLDMGGYWNPL 219
Query: 237 LEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
I + + ++ EG G GE++ + TIAC+ GA+R+ L G L
Sbjct: 220 TTAKIRLADQFAAVGQAHAAEGTGAAGEILAVTGDDVTIACADGAIRLGTLTSLSGTPLS 279
Query: 294 IGDFLLGCPVIIGCIV 309
+ D L G ++
Sbjct: 280 LRDLLR-----AGDVL 290
>gi|326469834|gb|EGD93843.1| methionyl-tRNA formyltransferase [Trichophyton tonsurans CBS
112818]
Length = 397
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALV----SSSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ EF++A+L AL S +I S V +P +P GR + A
Sbjct: 34 PLRILFCGSDEFSIASLNALYNERVESPDTIASIDVVCRPGKPVGRAMKTIREVPIKAAA 93
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
E SLP + + ++ + V++GL IP RIL K G N H SLLP
Sbjct: 94 NELSLPIHELDTFTKWTPPKPQGEPINLIIAVSFGLFIPPRILKGAKYGGLNVHPSLLPD 153
Query: 116 WRGAAPIQR 124
+RGAAP+
Sbjct: 154 FRGAAPLHH 162
>gi|260784741|ref|XP_002587423.1| hypothetical protein BRAFLDRAFT_129324 [Branchiostoma floridae]
gi|229272569|gb|EEN43434.1| hypothetical protein BRAFLDRAFT_129324 [Branchiostoma floridae]
Length = 909
Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 70/301 (23%), Positives = 114/301 (37%), Gaps = 33/301 (10%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S+F L H IV V+T P L+ + ++ +P
Sbjct: 1 MKIAVIGQSQFGTEVYNLLKKEGHEIVGVFTIPD-------LQGKPDPLAVAGEKDGVPT 53
Query: 63 LVPTKLGQEEY------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ + +Q+ + AD+ V+ IP ++N K G H S+LPR
Sbjct: 54 FKFPRWRVKGQSIPEVVQQYQACGADLNVLPFCSQFIPMDVINTPKHGSIIYHPSILPRH 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCA 175
RGA+ I ++ GD + G I D LDTGP+ R+ N GL +
Sbjct: 114 RGASAINWTLIHGDKKAGFTIFWADDGLDTGPILLQRECYAGPNETLDGLYNKFLYPEGI 173
Query: 176 HAMVEAMDKLEQNNLPLSPQIEN-GITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AM EA+ + P PQ E+ K ++N+ ++ E +HN IR PG
Sbjct: 174 KAMAEAVQLIADGKAPRIPQSEDGATYEPMLKKKESVQINWDQTGEALHNFIRGNDKLPG 233
Query: 235 AWLEMMIGNKHERI-----------KLLESQLVE-------GEGKPGEVINPNFTIACSQ 276
AW + + K+ + ++ E G KP V +
Sbjct: 234 AWTTINGEGQRNYTPPSLQVTLYGSKMFKKEVPEGAEVEVPGASKPAIVHKGGMIFTGND 293
Query: 277 G 277
G
Sbjct: 294 G 294
>gi|242215119|ref|XP_002473377.1| predicted protein [Postia placenta Mad-698-R]
gi|220727474|gb|EED81391.1| predicted protein [Postia placenta Mad-698-R]
Length = 365
Score = 74.1 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 6 VFMGTSEFAVATLQALVSSSH--SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
VF+G EF+ L+ L + ++V TQP GRRG K +S + A+ SLP
Sbjct: 19 VFLGRDEFSCRVLEHLHGAPDIWEDLAVVTQPDAKVGRRGSKLSVSPLKTLAENLSLPVH 78
Query: 64 VPTKLGQEEYEQF 76
Sbjct: 79 FIPPDKPSFKTWQ 91
>gi|221136598|ref|XP_002171083.1| PREDICTED: hypothetical protein, partial [Hydra magnipapillata]
Length = 209
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 83/203 (40%), Positives = 117/203 (57%), Gaps = 9/203 (4%)
Query: 105 FYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTA 164
N HASLLPRWRGAAPI RA+ AGD ETGI IM+MD LDTG + +++K+ I +N +
Sbjct: 3 CVNIHASLLPRWRGAAPIHRAVEAGDLETGITIMQMDAGLDTGAMLYIKKISIVNNETSK 62
Query: 165 GLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHN 224
L ++ L A +++E + + NL Q E+GITYA K+ K E ++F + A V
Sbjct: 63 TLHDKMLNLGAESLLECLSDILAGNLLAVEQPEDGITYAHKLKKTECTLDFNQEAAVVVR 122
Query: 225 HIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEG--KPGE-VINPN--FTIACSQGAV 279
IRAL P+PG E+ E IK++E++L +PG V+ N I+C GA+
Sbjct: 123 KIRALFPWPGTVCELSG----ETIKIIEAELFNETLPYQPGTWVVKDNSQVLISCKVGAI 178
Query: 280 RIMRLQRAGGRVLDIGDFLLGCP 302
+ LQR G + + DFL G
Sbjct: 179 SLRMLQRPGSKPISNVDFLNGYR 201
>gi|300311402|ref|YP_003775494.1| methionyl-tRNA formyltransferase [Herbaspirillum seropedicae SmR1]
gi|300074187|gb|ADJ63586.1| methionyl-tRNA formyltransferase protein [Herbaspirillum
seropedicae SmR1]
Length = 305
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 61/295 (20%), Positives = 111/295 (37%), Gaps = 19/295 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ V + V L+ L++ + V T +V +E +
Sbjct: 1 MNAVVFAYHDVGVRCLKVLLARGVQVSLVVTHEDSATEN----IWFGSVAGVCREHGIAC 56
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ P + Q + D Y ++P +L A K G YN H SLLP++RG P
Sbjct: 57 ITPADPKSPQLLAQVQAAQPDFIFSFYYRHMLPVEVLAAAKRGAYNMHGSLLPKYRGRVP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G+ ETG + +M D G + VPI + + ++ V +
Sbjct: 117 INWAVLHGETETGATLHEMTVKPDAGAIVAQTSVPILPDDTAHEVFGKVVVAAELTLWNV 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ + P P + +Y + R+++ R+A VHN +RA++P +
Sbjct: 177 LPAMLSGRTPSMPNDLSKGSYYGGRKPEDGRIDWRRTAREVHNLVRAVAP---PYPGAFE 233
Query: 242 GNKHERIKLLESQLVEGEGKP------GEVIN----PNFTIACSQG-AVRIMRLQ 285
++I + ++LV P G C G ++I+ +Q
Sbjct: 234 EIADDKITVTRTRLVPPSAHPALQRAHGMQDKFFEGGKLYARCGDGNFLQILGIQ 288
>gi|257094847|ref|YP_003168488.1| formyl transferase domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047371|gb|ACV36559.1| formyl transferase domain protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 309
Score = 73.8 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 63/284 (22%), Positives = 110/284 (38%), Gaps = 7/284 (2%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R V L+ L++ + V + PA V A ++ +P +
Sbjct: 6 RAVVFAYHNVGARCLRVLIAHGVDVALVVSHADDPAEN----LWFERVADLAGDYGIPVV 61
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
P G E+ + + Y ++ L A G YN H SLLP++RG AP+
Sbjct: 62 TPEDPGTPEFVARVQALRPDFLFSFYYRLMLCPALLAIPRGAYNMHGSLLPKYRGRAPVN 121
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
A++ G+ ETG + +M D G + + VPI + + +++V A+ +
Sbjct: 122 WALIHGERETGATLHRMVDKPDAGEIVARQAVPILPDDTAREVFNKVTVAAELALDRVLP 181
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIG 242
L +P +Y + R+++ + A VHN IR P+PGA+ ++
Sbjct: 182 ALLAGTAAHAPLDLKAGSYFAGRKPEDGRIDWAQPAAVVHNLIRAVAPPYPGAFFDLDGR 241
Query: 243 NKHERIKLLESQLVEGEGKPGEVINP-NFTIACSQ-GAVRIMRL 284
L G+P + C+ G +RI+ L
Sbjct: 242 RIVITRSLFRPGETGPAGQPALYADDTRLLARCADGGVLRILSL 285
>gi|227536518|ref|ZP_03966567.1| methionyl-tRNA formyltransferase [Sphingobacterium spiritivorum
ATCC 33300]
gi|227243595|gb|EEI93610.1| methionyl-tRNA formyltransferase [Sphingobacterium spiritivorum
ATCC 33300]
Length = 220
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 110/220 (50%), Gaps = 9/220 (4%)
Query: 92 VIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAF 151
++P+ + + G N H SLLP++RGAAPI AI+ G+ +TG+ + +DTG + F
Sbjct: 1 MLPELVWDMPVKGTINVHGSLLPQYRGAAPINHAIINGEEKTGVTTFLLQHEIDTGNILF 60
Query: 152 MRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIE----NGITYAEKIS 207
+VPI+ N N + +L A +++ ++ ++ +L PQ + + +A KI
Sbjct: 61 KGEVPIAENDNAGTIHDKLMHKGAEVLLQTIEAMKSGSLTPIPQDTLIEGSTLKHAPKIF 120
Query: 208 KGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN 267
K + +N+ +S V N IR LSP+P A+ + K +I +E ++ + + + G+ +
Sbjct: 121 KEDCLINWDKSTTTVFNLIRGLSPYPAAFTYL--DGKVLKIYEVEKEITKPDIQAGQYVT 178
Query: 268 PN---FTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVI 304
A G + + LQ G + + +FL G
Sbjct: 179 DGKTYLKYATQDGYIHLKALQIEGKKRMLTDEFLRGYRFA 218
>gi|99082242|ref|YP_614396.1| amino acid adenylation [Ruegeria sp. TM1040]
gi|99038522|gb|ABF65134.1| non-ribosomal peptide synthetase [Ruegeria sp. TM1040]
Length = 1519
Score = 73.4 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 61/317 (19%), Positives = 114/317 (35%), Gaps = 35/317 (11%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
MT+ V +G + +AL++ H I +V + + + A L
Sbjct: 1 MTISTVVIGNESLLIGCCEALLARGHDIRAVVS-------------TDAEITSWAASKGL 47
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
D + +A V+P+ +++ +LG N H LP G
Sbjct: 48 NTHSKPLEI--------DIEFDWLLSIANLQVLPEAVISKARLGAVNFHDGPLPDRAGLN 99
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
AI+ G E GI ++ +D G + R+ I+ + L + + E
Sbjct: 100 TPNWAILEGAEEHGITWHLIEGGVDEGDILAQRRFAIAPDETAFSLNSKCYGAALDSFGE 159
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKG----ETRVNFCRSAENVHNHIRALSPFPGAW 236
+++LE L +PQ + Y + + R + R + +
Sbjct: 160 VLEQLESGALERTPQDLSHRRYHARKDRPDAAGFLRFDRNRDTLLCLVRGLDMGGYWNPL 219
Query: 237 LEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQ-RAGGRVL 292
I + + +Q EGEG PGEV+ T+AC+ GA+ + L+ +GG +
Sbjct: 220 TTAKIRLPGQVAAVGAAQATEGEGIPGEVLAVSANALTVACADGAIELRDLKTLSGGALQ 279
Query: 293 DIGDFLLGCPVIIGCIV 309
+ +G ++
Sbjct: 280 PSA------LLEVGDVL 290
>gi|145588619|ref|YP_001155216.1| hypothetical protein Pnuc_0432 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047025|gb|ABP33652.1| formyl transferase domain protein [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 289
Score = 73.4 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 61/290 (21%), Positives = 107/290 (36%), Gaps = 10/290 (3%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
V V L+AL+++ + V T P +V + QE ++ + P
Sbjct: 4 VVFAYHNVGVGCLKALIAAGIKVDLVVTHQDDP----NENVWFGSVAQLCQEKNIDCITP 59
Query: 66 TKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
E + + D Y +I IL K+ N H SLLP++RG AP+
Sbjct: 60 NASQLVELIPRLRALAPDYIFSFYYRHMISAEILAIAKIAALNMHGSLLPKYRGRAPVNW 119
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
AI+ G++ETG + M+ D G + V I + + ++S + + +
Sbjct: 120 AILHGESETGATLHVMEAKPDAGDIVGQASVAIGPDETATEVFGKVSQAAVKVITQVLPD 179
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK 244
L + P +Y + ++++ ++A VHN +RA++P G
Sbjct: 180 LITGKITRKPNELEKGSYFGGRKPSDGQIHWDQTALQVHNLVRAVAPPYPGAFTDHQGKT 239
Query: 245 HERIKLLESQLVEGEGKPG----EVINPNFTIACSQ-GAVRIMRLQRAGG 289
K G +V++ C AV I+ AG
Sbjct: 240 MIVSKTSLKGPFAANLDLGLAGIQVVDNRVFGICGDRQAVEILEWFPAGK 289
>gi|293396356|ref|ZP_06640634.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase [Serratia
odorifera DSM 4582]
gi|291421145|gb|EFE94396.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase [Serratia
odorifera DSM 4582]
Length = 224
Score = 73.0 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 5/152 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + A L+AL + + I +V+T P G + S+V + E +LP
Sbjct: 2 MKAIVFAYHDIGCAGLKALTEAGYDIQAVFTHTDDP----GENNFFSSVARIGAELNLPV 57
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E+ D+ Y ++ IL+ G +N H SLLPR+RG AP
Sbjct: 58 YAPEDVNHPLWVERLRELQPDIIFSFYYRNLLSDEILSLAPQGGFNLHGSLLPRYRGRAP 117
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMR 153
I A++ G+ ETG + KM K D G +
Sbjct: 118 INWALVNGERETGATLHKMVKRADAGDIVAQH 149
>gi|6225380|sp|O33510|FMT_RICAU RecName: Full=Methionyl-tRNA formyltransferase
gi|2370422|emb|CAA73597.1| L-methionyl-tRNA-fMet N-formyltransferase [Rickettsia australis]
Length = 73
Score = 73.0 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 243 NKHERIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ IK+LE++ + G VI+ IAC G +++ +LQ+ + L++ +FL G
Sbjct: 4 YNDKVIKILEAEYLNTNHHFTAGTVISDKLEIACGSGILQVQKLQQESKKALNVEEFLRG 63
Query: 301 CPVIIGCIV 309
++ I+
Sbjct: 64 TNILKATIL 72
>gi|6225378|sp|O33509|FMT_RICAK RecName: Full=Methionyl-tRNA formyltransferase
gi|2370420|emb|CAA73596.1| L-methionyl-tRNA-fMet N-formyltransferase [Rickettsia akari]
Length = 73
Score = 72.6 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 243 NKHERIKLLESQLVE--GEGKPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ IK+LE++ + G VI+ IAC G +++ +LQ+ + L++ +FL G
Sbjct: 4 YNDKVIKILEAEYLNTIHHVTAGTVISDKLEIACGSGILQVKKLQQESKKALNVEEFLRG 63
Query: 301 CPVIIGCIV 309
++ I+
Sbjct: 64 TNILKATIL 72
>gi|258614265|ref|ZP_05712035.1| methionyl-tRNA formyltransferase [Enterococcus faecium DO]
Length = 187
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 190 LPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIK 249
PQ E+ T++ I++ + +++ ++AE + N +R + P+P A+ R K
Sbjct: 63 QKPVPQDESEATFSPNITREQEAIDWHKTAEEIDNQVRGMRPWPIAFTTYEG----IRWK 118
Query: 250 LLESQLVE--GEGKPGEVI---NPNFTIACS-QGAVRIMRLQRAGGRVLDIGDFLLGC 301
LL +++ + PG +I N IAC Q + I LQ AG + DFL G
Sbjct: 119 LLSVEVLAETTDKAPGTIIRKDKKNLWIACGKQTVLAINELQPAGKGKQAVHDFLNGS 176
>gi|126732200|ref|ZP_01748001.1| non-ribosomal peptide synthetase [Sagittula stellata E-37]
gi|126707282|gb|EBA06347.1| non-ribosomal peptide synthetase [Sagittula stellata E-37]
Length = 1521
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 51/310 (16%), Positives = 97/310 (31%), Gaps = 30/310 (9%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
V MG V + ++ H+I +V T+ V + A L
Sbjct: 7 VLMGNESLLVQCAEMVLKRGHAIRAVVTKSDD-------------VRRWATGRGLRVEDY 53
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
+ D + +A +IP +L G N H LPR G A
Sbjct: 54 GPGLSDRL-----GTFDWLLSIANLEMIPDTVLRCAASGAVNFHDGPLPRHAGLNAPVWA 108
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
++ G+ G++ ++ +D G V R ++ L + A A +
Sbjct: 109 LVEGETTHGVSWHMIEGGVDEGDVLVQRGFDVTPEDTALTLNTKA-WEAAMASFPEVLDQ 167
Query: 186 EQNNLPLSPQIENGITYAEKISKGETR----VNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L PQ + TY + + P+ +
Sbjct: 168 LETGLKRQPQDLSQRTYHALKDRPAGFGLLDFTRPAAELERLVRALDHGPYWNPLCAAKL 227
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN--PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLL 299
++ + +++ + PG V+ +AC GA+ + L R G +D +
Sbjct: 228 RSRDALWLVGGARVEQSHAAPGTVLEAGDRLVVACGGGALALSGLTRICGMPVDASEVA- 286
Query: 300 GCPVIIGCIV 309
+G ++
Sbjct: 287 ----SVGDVL 292
>gi|254585701|ref|XP_002498418.1| ZYRO0G09812p [Zygosaccharomyces rouxii]
gi|238941312|emb|CAR29485.1| ZYRO0G09812p [Zygosaccharomyces rouxii]
Length = 362
Score = 72.6 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 55/340 (16%), Positives = 105/340 (30%), Gaps = 34/340 (10%)
Query: 2 TLRVVFMGTSEFAVATLQALVS---SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
+L V++ G+ EF++ +L+AL S + + T+PP+ GR + A +
Sbjct: 14 SLNVLYFGSDEFSIHSLRALNELKGRSVDKLQLVTRPPKWCGRSKSIKKNVPIVNVADQL 73
Query: 59 SLP--ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
LP ++ + + + ++ + L N H SLLPR+
Sbjct: 74 GLPPARHCDSREDMLQLIDLVKSHEFNMIIAVSFGRLIPAQLLEQVPYSLNVHPSLLPRY 133
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
+GA+PIQ ++ D TG+ I + H + +P+
Sbjct: 134 KGASPIQYTLLNQDRYTGVTIQTLHPHKFDHGSIVAQTIPLKVQNLVQNRTVSEFEPGFP 193
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP--- 233
A+ + N C +++ R P
Sbjct: 194 KRTAALMDQLGLQGGSLLKHVINDKLYASPPALNPPYNSCYASKITSEMRRLHWPQDTAE 253
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGE----------------------GKPGEVI----N 267
A ++ K ++ + K GE I +
Sbjct: 254 TAITKLETLGPPYVFKQVDENKSKTMVDETPVKRIIFHNFERADFLPFSKAGEFIYNDKD 313
Query: 268 PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGC 307
+ + C A++I LQ G ++ F+ G
Sbjct: 314 QHIYVQCHSDALKIKELQFEGFKMEKPEQFMKSLRKRCGT 353
>gi|50555377|ref|XP_505097.1| YALI0F06820p [Yarrowia lipolytica]
gi|49650967|emb|CAG77904.1| YALI0F06820p [Yarrowia lipolytica]
Length = 366
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 61/337 (18%), Positives = 111/337 (32%), Gaps = 41/337 (12%)
Query: 2 TLRVVFMGTSEFAVATLQALVS------SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
L++ + G+ +F++ +LQA++ S+ V+V T+PP+ AGR + + A
Sbjct: 32 ALKIAYFGSDKFSIKSLQAVLQLQKEDPSAIESVTVVTKPPKRAGRGLKELKDVPITDFA 91
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
E L L + + + V V+YG +IPQ+ L TK G N H S LP+
Sbjct: 92 VENGLTVLRADNKTEINALP---NDFSLVVAVSYGGLIPQQFLANTKYGGLNVHPSFLPQ 148
Query: 116 WRGAAPIQR-----AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL 170
+ G API G + K D+ + S+ + +
Sbjct: 149 YHGPAPIHHALLNGDKTTGVTVQTLHPTKFDRGRVVAISEKVPITRDSTFESLRDTLADT 208
Query: 171 SVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
++ ++ + + + S + + + + +
Sbjct: 209 GAELLYSTIKDRNFTDSSYEVKSGCPDVYAGHVTSKMRAIDWSVDTADKLERYCNTLGSL 268
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLVEGE--------GKPGE--VINPNFTIACSQGAVR 280
+ E + KLL L E + G PG +++ I G V
Sbjct: 269 YTHKLFEERKQVKAEFQEKLLRVLLSELKKVDGIEAFGAPGTHKLVDRTVLINTVDGVVS 328
Query: 281 IMRLQRA---------------G--GRVLDIGDFLLG 300
LQ G + +F G
Sbjct: 329 CPTLQVEFQAVEDADKFEKRCVGSKKKRAKSEEFQNG 365
>gi|6225386|sp|O33545|FMT_RICRH RecName: Full=Methionyl-tRNA formyltransferase
gi|2370445|emb|CAA73595.1| L-methionyl-tRNA-fMet N-formyltransferase [Rickettsia rhipicephali]
Length = 73
Score = 72.6 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 243 NKHERIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ IK+LE++ + + G VI+ IAC G +R+ +LQ+ + L+I +FL G
Sbjct: 4 YNDKIIKILEAEYLNADHHFTSGTVISDKLEIACGSGILRVKKLQQESKKALNIEEFLCG 63
Query: 301 CPVIIGCIV 309
++ ++
Sbjct: 64 TNILKDTVL 72
>gi|329912091|ref|ZP_08275658.1| Polymyxin resistance protein ArnA-FT,
UDP-4-amino-4-deoxy-L-arabinose formylase
[Oxalobacteraceae bacterium IMCC9480]
gi|327545726|gb|EGF30863.1| Polymyxin resistance protein ArnA-FT,
UDP-4-amino-4-deoxy-L-arabinose formylase
[Oxalobacteraceae bacterium IMCC9480]
Length = 202
Score = 72.2 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 75/198 (37%), Gaps = 5/198 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R V V LQ L++ I V T PA +V E +P
Sbjct: 2 MRAVVFAYHNVGVRCLQVLLARGVEIALVVTHQDNPAET----IWFESVAALCAEHGIPV 57
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P EQ + D Y ++P +L +LG +N H SLLP++RG P
Sbjct: 58 TTPDDPASPALLEQVRAIAPDFIFSFYYRHMLPVPLLALARLGAFNLHGSLLPKYRGRVP 117
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I A++ G+ TG + +M D G + VPI + + ++ V + +
Sbjct: 118 INWAVLHGEQSTGATLHEMAAKPDAGAIVAQTSVPILPDDTAYEVFGKVVVAAEKTLWDV 177
Query: 182 MDKLEQNNLPLSPQIENG 199
+ + +P P +
Sbjct: 178 LPDMLAGRIPRLPNDISQ 195
>gi|299741994|ref|XP_001832177.2| methionyl-tRNA formyltransferase [Coprinopsis cinerea okayama7#130]
gi|298404980|gb|EAU89550.2| methionyl-tRNA formyltransferase [Coprinopsis cinerea okayama7#130]
Length = 422
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 61/369 (16%), Positives = 109/369 (29%), Gaps = 67/369 (18%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSH---SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
L+V+FMG EF+ L+ L ++S +V V T + GRR + +S + AQ+
Sbjct: 43 KLKVLFMGRDEFSCLVLRELYAASDVWQELV-VVTNQDQRVGRRASQVSVSPLKLLAQDL 101
Query: 59 S------LP-----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQ------------ 95
+P ++ S + +
Sbjct: 102 KNVWLEYIPDTKPEFRKWELPAPFSSYRYSSSEHENGINHEPPPPSQHVLVTASFGRILT 161
Query: 96 --RILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHL--------- 144
+ N H SLLP++RG APIQ +IM GD ETG+ +++M +
Sbjct: 162 RKHLSRFLPSRRLNVHPSLLPQYRGPAPIQHSIMNGDPETGVCVIEMLDAVKKDAVSPKA 221
Query: 145 -----DTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENG 199
D M + + ++ M + + Q ++
Sbjct: 222 GIDAGDIWASMKMAQPATADFAQMRDALAVEGGKLLVGVLRKMKQGIEGTRRSQIQPDSQ 281
Query: 200 I--TYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQ--- 254
+ A I + V+ + + E+ K ++
Sbjct: 282 VALRPAPMIHLQDAFVDPAKMVAEQVCQKWRAIAHQRPIFTYRAEHHGEKDKAVQLHGLQ 341
Query: 255 ----------LVEGEGKPGEVI--------NPNFTIAC-SQGAVRIMRLQRAGGRVLDIG 295
+PG I + C G + ++ AG VL
Sbjct: 342 LLPPGSSSHVEAALPQEPGSAICTSTEKGQPKRIFVRCEGGGIFALSSVKPAGKPVLPAA 401
Query: 296 DFLLGCPVI 304
D+ G
Sbjct: 402 DYWNGIKDK 410
>gi|167569677|ref|ZP_02362551.1| hypothetical protein BoklC_07543 [Burkholderia oklahomensis C6786]
Length = 268
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 95/232 (40%), Gaps = 5/232 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDSPTEN----IWFGSVASVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P + + + ++ D Y ++P +L G YN H SLLP++RG
Sbjct: 57 PVVTPADPARADVREAVAGAKPDFIFSFYYRHMLPVDLLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
+ L P P + +Y + R+++ +SA V+N IRA++P
Sbjct: 177 RVLPALIAGEAPHLPNDLSQGSYYGGRKPEDGRIDWSQSAAQVYNLIRAVAP 228
>gi|238486592|ref|XP_002374534.1| methionyl-tRNA formyltransferase, putative [Aspergillus flavus
NRRL3357]
gi|317144144|ref|XP_001819933.2| methionyl-tRNA formyltransferase [Aspergillus oryzae RIB40]
gi|220699413|gb|EED55752.1| methionyl-tRNA formyltransferase, putative [Aspergillus flavus
NRRL3357]
Length = 327
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 57/289 (19%), Positives = 108/289 (37%), Gaps = 9/289 (3%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
V G V L L++ + + V T +V A +P + P
Sbjct: 5 VVFGYHNVGVRCLSVLLAQNIEVKLVVTHSDD----DDENIWFDSVSNLASLHGIPVVTP 60
Query: 66 TKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
EE + S N D+ Y ++ +L + G YN H SLLP +RG AP+
Sbjct: 61 DSPNTEEMLTRLRSLNPDLIFSFYYRKILSVPVLETARRGCYNMHGSLLPHYRGRAPVNW 120
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
A++ G+ +TG + +M + D G + VPI N + + ++ V + + + +
Sbjct: 121 ALLHGETQTGATLHEMVRKPDAGAIVGQMAVPILPNDTASDVFSKVLVAAELVLCQTLPE 180
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNH--IRALSPFPGAWLEMMIG 242
+ + + +Y + +++ ++ P+PGA+++ G
Sbjct: 181 IVRGTVVARKMDLRSGSYFGGRKPQDGLIDWGTMGARQIHNLVRAVTHPYPGAFMDTARG 240
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPNFT--IACSQGAVRIMRLQRAGG 289
L+ +P + IAC G +RI+ + G
Sbjct: 241 RITIWRTLVLDDSPTSSARPSLLQEGGQLRAIACDGGVLRIVHAELEGR 289
>gi|171463212|ref|YP_001797325.1| formyl transferase domain protein [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171192750|gb|ACB43711.1| formyl transferase domain protein [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 289
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 68/290 (23%), Positives = 116/290 (40%), Gaps = 10/290 (3%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
V + V L+AL+ + I V T P +V K E +P + P
Sbjct: 4 VVFAYHDVGVNCLRALLDAGIQIDLVVTHQDDP----NENVWFGSVAKLCIEKKIPHITP 59
Query: 66 TKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
E + + D Y +IP++IL K+ N H SLLP++RG AP+
Sbjct: 60 NANELVELIPKLQALAPDYIFSFYYRFMIPEQILKCAKIAALNMHGSLLPKYRGRAPVNW 119
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
AI+ G+ +TG + M+ D G + V I + + ++S + + +
Sbjct: 120 AILHGEAQTGATLHIMETKPDAGDIVGQVVVSIGPDETATDVFGKVSEAAVSVINQVLPS 179
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIGN 243
L Q N+P P +Y + ++++ ++A+ VHN +R P+PGA+ +
Sbjct: 180 LTQGNVPRKPNELEKGSYFGGRKPADGQIHWNQTAKQVHNLVRAVAPPYPGAFTDFEGNA 239
Query: 244 KHE-RIKLLESQLVEGE-GKPG-EVINPNFTIACSQ-GAVRIMRLQRAGG 289
R L + G G +V++ C AV I+ A
Sbjct: 240 IIVARTSLNGPFPANLDLGVCGIQVVDNRVFGICGDRQAVEILEWFPASK 289
>gi|94313513|ref|YP_586722.1| formyltransferase [Cupriavidus metallidurans CH34]
gi|93357365|gb|ABF11453.1| formyltransferase [Cupriavidus metallidurans CH34]
Length = 308
Score = 72.2 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 69/291 (23%), Positives = 117/291 (40%), Gaps = 10/291 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R V L+ L + + V T RP V A E +L
Sbjct: 1 MRAVVFAYHNVGDRCLRVLHARGVDVALVVTHRDRP----DENIWFRRVADTAAELNLSF 56
Query: 63 LVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L E + DV Y +IP +L G +N H SLLP++RG P
Sbjct: 57 LYGEDPTDPALAEAVRAAKPDVIFSFYYRSMIPADLLAVAPQGAFNMHGSLLPKYRGRVP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG + M+ D G + VPI + + ++++V + A
Sbjct: 117 VNWAVLRGEEETGATLHAMEAKPDAGYIVDQTSVPILPDDTAGEVFEKVTVAAEQTLWRA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + P P + + +Y + R++F + A V+N IR P+PGA+ ++
Sbjct: 177 LPAMMAGQTPKRPNVLSEGSYFSGRKPEDGRIDFSQPAAAVYNLIRAVAPPYPGAFTDIG 236
Query: 241 IGNKHE-RIKLLESQLVEGEGKPG-EVINPNFT-IACSQGAVRIMRLQRAG 288
+ + LES V +PG V++ + GA+R+ +L G
Sbjct: 237 GRRFIVAQARRLESSSVPAGLQPGLHVVDGRIVAVGGDGGAIRVTQL-LEG 286
>gi|320038104|gb|EFW20040.1| methionyl-tRNA formyltransferase [Coccidioides posadasii str.
Silveira]
Length = 398
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALV----SSSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ E ++A+LQAL S +I S V +P + GR + + A
Sbjct: 34 PLRILFCGSDEISIASLQALHAEHSKSPETIASIDVVCRPGKRVGRGLKRIREVPIKAVA 93
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ SLP Q ++ V V++GL +P RIL A + G N H SLLP
Sbjct: 94 ENLSLPIHEIDTFTGWTPPQPQQGPCNLIVAVSFGLRVPPRILGAARYGGLNIHPSLLPD 153
Query: 116 WRGAAPIQR 124
+RG API
Sbjct: 154 FRGPAPIHH 162
>gi|297518375|ref|ZP_06936761.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli OP50]
Length = 182
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V + A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVARLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + ++ + DV Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHPLWVERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
+ ++ G+ ETG+ + +M K D G + ++ I+ + L +L
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCH 167
>gi|407250|gb|AAA03393.1| methionyl-tRNA formyltransferase-like protein [Mycoplasma
genitalium]
Length = 116
Score = 72.2 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 2 TL-RVVFMGTSEFAVATLQAL-VSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
+ ++VF GTS + L+ L + I +V TQP + R K V S V E +
Sbjct: 19 KMFKIVFFGTSTLSKKCLEQLFYDNDFEICAVVTQPDK-INHRNNKIVPSDVKSFCLEKN 77
Query: 60 LPALVPTK 67
+ P +
Sbjct: 78 ITFFQPKQ 85
>gi|163784274|ref|ZP_02179191.1| methionyl-tRNA formyltransferase [Hydrogenivirga sp. 128-5-R1-1]
gi|159880463|gb|EDP74050.1| methionyl-tRNA formyltransferase [Hydrogenivirga sp. 128-5-R1-1]
Length = 103
Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 213 VNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGE--GKPGEVIN--- 267
+N+ +SA + N IRA +P A+ + + +K+LE+++++ G GE+++
Sbjct: 2 INWEKSAREIFNQIRAFKVWPKAFTKFRD----KEVKILEAKVLDENSHGNAGEIVDIVK 57
Query: 268 -PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
+ +G + I ++Q + + D + G + IG G
Sbjct: 58 GKGIVVQTGKGKLLIEKMQFPNSKAISADDAVRGYHIEIGEKFG 101
>gi|34762474|ref|ZP_00143473.1| Methionyl-tRNA formyltransferase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27887873|gb|EAA24942.1| Methionyl-tRNA formyltransferase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 141
Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 55/126 (43%), Gaps = 11/126 (8%)
Query: 191 PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKL 250
Q +N +T+ + K + ++++ +++ + N IR ++P P A+ + IK+
Sbjct: 19 KAKKQDKNLVTFVKPFKKEDCKIDWTKTSREIFNFIRGMNPVPTAFSNLNET----IIKI 74
Query: 251 LESQLVE---GEGKPGEVIN----PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPV 303
E+++ + GE++ + S G++ I + + + D + G +
Sbjct: 75 YETKINDKVYNNATCGEIVEYLKGKGIVVKTSDGSLIITSAKPENKKQMSGVDLINGKFL 134
Query: 304 IIGCIV 309
IG +
Sbjct: 135 KIGEKL 140
>gi|212528362|ref|XP_002144338.1| methionyl-tRNA formyltransferase family protein, putative
[Penicillium marneffei ATCC 18224]
gi|210073736|gb|EEA27823.1| methionyl-tRNA formyltransferase family protein, putative
[Penicillium marneffei ATCC 18224]
Length = 406
Score = 71.8 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 69/335 (20%), Positives = 118/335 (35%), Gaps = 51/335 (15%)
Query: 2 TLRVVFMGTSEFAVATLQALVS----SSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
LRV+F G+ EF++A+L+AL + + SI S V +P + GR + + A
Sbjct: 39 PLRVLFCGSDEFSIASLKALHAEQLRAPQSIKSIDVVCRPGKRVGRGLKQIREVPIKSTA 98
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
E L D+ V V++GL +P R+L A K G N H SLLP
Sbjct: 99 SELGLRIHELDTFKGWTPP---DGPIDLIVAVSFGLFVPSRLLTAAKYGGVNVHPSLLPD 155
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL----- 170
RG AP+ +++G TG+ + + + + +
Sbjct: 156 LRGPAPLHHTLLSGQTTTGVTLQTLHHKHFDHGIILDQTPAPGIPVPNPESCTVPELLGL 215
Query: 171 -------SVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVH 223
+L + L++ +T+A KI+ + + + A
Sbjct: 216 LAPKGAEMLLNGIRNCVFVPPLKEVESQFRGYDAKNLTHAAKITPEDRHIKWREWAWTDI 275
Query: 224 N---------HIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPG----------- 263
N +AL P E + +RI E + V + PG
Sbjct: 276 NRRQRVLSPLWSKALIPAQKPSAEDPKNFQWKRIIFDEIEEVSQDTVPGSQWLSLLPGVA 335
Query: 264 ---------EVINPNFTIACSQG-AVRIMRLQRAG 288
++ + I + G +R+ RL+ G
Sbjct: 336 FTPGNPTQNKIHDKALYIYTTDGKLLRLNRLKVEG 370
>gi|198415856|ref|XP_002129780.1| PREDICTED: similar to mitochondrial methionyl-tRNA
formyltransferase isoform 1 [Ciona intestinalis]
Length = 336
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 74/318 (23%), Positives = 128/318 (40%), Gaps = 34/318 (10%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVS-----VYTQPPRPAGRRGLKSVLSAVHKKAQ 56
+++F G+ F++ TL+ L ++ + V P K S VH+ A
Sbjct: 17 PYKILFFGSDCFSLVTLKKLHNAYINGSLITKLEVMCLP-------HSKIRKSVVHEFAT 69
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+P D+ VVV++G ++PQRI+++ LG N H SLLP+
Sbjct: 70 NHQIPIYYWGNFEFG-------GEFDLGVVVSFGKMMPQRIIDSFSLGMLNVHGSLLPQL 122
Query: 117 RGAAPIQRAIMAGDNETGIAIMKM--DKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
RG++P+ RAI G TG++I ++ D +++ V I ++N+ L Q+L+ +
Sbjct: 123 RGSSPVSRAIQGGITSTGVSIFQIKSDGFDHGKILSYSSPVVIDDHVNSDELTQKLAYIG 182
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
A +E + + Q I+YA KI+ ET +N+ +
Sbjct: 183 ADLCLEVLWNFPERIANAKEQDRKLISYAPKINVQETFINWESMTPETILKNFRAFGYQK 242
Query: 235 AWLEMMIGNKHER-------IKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMR 283
+ N + ++ V G PG V + + C G V +
Sbjct: 243 DYFLRCEYNGQMIKFLQLSSCTVEQTAFVSGNCPPGMVSYHKPSKTLLVKCCSGHVACTK 302
Query: 284 LQRAGGRVLDIGDFLLGC 301
L G++L DF G
Sbjct: 303 LLY--GKILSSADFYNGF 318
>gi|254494949|ref|ZP_01052758.2| Methionyl-tRNA formyltransferase [Polaribacter sp. MED152]
gi|213690531|gb|EAQ42186.2| Methionyl-tRNA formyltransferase [Polaribacter sp. MED152]
Length = 300
Score = 71.5 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/317 (15%), Positives = 120/317 (37%), Gaps = 30/317 (9%)
Query: 2 TLRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+++ + ++ + L+ S I + + + + + + ++++
Sbjct: 5 KIKIGYFADGPWSHLAFEKLIQDKSLDIKFIVPRTD---------TKDNTLKDYSIKYNI 55
Query: 61 PA-LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
E + + +N D+ V +++ + ++I++ KLG N HA LP +RG
Sbjct: 56 DYLFPVKINSPEFIAKVIDYNCDLLVSMSFNQIFKRQIISIPKLGVINCHAGKLPFYRGR 115
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
+ A++ + + GI + +D+ +DTG + +K PI+ + + L + + CA+ +
Sbjct: 116 NILNWALINDEKDFGITVHYVDEGIDTGDIIKQKKFPINDSDSYNSLLKIAFIECANILY 175
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL---SPFPGAW 236
EA+ +++ N Q +GE + + P P A
Sbjct: 176 EAIKEIQLGNSNRIKQSFIHPVGFYCGRRGEGDEIINWNKNSRELFNFIRAIDKPGPMAT 235
Query: 237 LEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + S+ ++ G G+++ N F + + I+ ++
Sbjct: 236 TFVKGNVVKINKSRIVSEAIDYIGTNGQILAKTNDGFFVKTKDNFLEILEIE-------- 287
Query: 294 IGDFLLGCPVIIGCIVG 310
+ +G +G
Sbjct: 288 -----SNYKLRVGDKLG 299
>gi|294635678|ref|ZP_06714151.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Edwardsiella tarda ATCC 23685]
gi|291090982|gb|EFE23543.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Edwardsiella tarda ATCC 23685]
Length = 156
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 5/154 (3%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M ++ V + A +Q+L+ + + I ++ T P G ++V + A + ++
Sbjct: 1 MIMKAVVFAYHDMGCAGVQSLIDAGYEIAAIITHQDAP----GENVFFASVARLAAQHTI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P E+ V Y ++ IL G +N H SLLP +RG
Sbjct: 57 PVFAPDDVNHPLWIERLRELQPQVIFSFYYRHLLSDEILALAPQGAFNLHGSLLPAYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMR 153
AP+ ++ G+ ETG+ + +M+ D G + +
Sbjct: 117 APLNWVLVNGETETGVTLHRMEARADAGNIIAQQ 150
>gi|6225384|sp|O33535|FMT_RICMO RecName: Full=Methionyl-tRNA formyltransferase
gi|2370432|emb|CAA73594.1| L-methionyl-tRNA-fMet N-formyltransferase [Rickettsia montanensis]
Length = 73
Score = 71.5 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 243 NKHERIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ IK+LE++ + G +I+ IAC G +R+ +LQ+ + L+I +FL G
Sbjct: 4 YNDKIIKILEAEYLNAAHHFTSGTLISDKLEIACGSGILRVKKLQQESKKALNIEEFLRG 63
Query: 301 CPVIIGCIV 309
++ ++
Sbjct: 64 TNILKDTVL 72
>gi|167587001|ref|ZP_02379389.1| hypothetical protein BuboB_16787 [Burkholderia ubonensis Bu]
Length = 245
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 55/232 (23%), Positives = 90/232 (38%), Gaps = 5/232 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNP----NENIWFGSVASVAAAHGI 56
Query: 61 PALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P + L+ D Y ++P +L G YN H SLLP++RG
Sbjct: 57 PVVTPADPADPALRRALADARPDFIFSFYYRHMLPVDLLAVAPRGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIIGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
+ L P P +Y + R+++ + A V+N IRA++P
Sbjct: 177 RVLPALLAGEAPHLPNDLAAGSYFGGRKPEDGRIDWSKPAAQVYNLIRAVAP 228
>gi|2370428|emb|CAA73598.1| L-methionyl-tRNA-fMet N-formyltransferase [Rickettsia felis]
Length = 72
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 243 NKHERIKLLESQLVEGEG--KPGEVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
+ IK+LE++ + + G VI+ IAC G +R+ +LQ+ + L+I +FL G
Sbjct: 4 YNDKIIKILEAEYLNADHHFTSGTVISDKLEIACGSGILRVKKLQQESKKALNIEEFLRG 63
Query: 301 CPV 303
+
Sbjct: 64 TNI 66
>gi|311746826|ref|ZP_07720611.1| putative methionyl-tRNA formyltransferase [Algoriphagus sp. PR1]
gi|126578508|gb|EAZ82672.1| putative methionyl-tRNA formyltransferase [Algoriphagus sp. PR1]
Length = 302
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/294 (14%), Positives = 112/294 (38%), Gaps = 21/294 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS--HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
++++F S +++ A++ H I V TQ +G + ++ +L
Sbjct: 1 MKIIFFTQSNWSIP---AIIELGKTHEISGVVTQ------LQGPNFNPQLIG-FLEQSNL 50
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + ++ ++ + + D+ + + I + I ++ +G N H LP++ G A
Sbjct: 51 PIIDWDQISKDGWASISKDS-DIGISFGFSKKIKEEIFSSFPMGVLNVHFGKLPKYAGPA 109
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P+ + + I+ +D+ D G + + +PI L + + +
Sbjct: 110 PLFWTLKNQEPTLTISFHLIDQDWDAGDLVYEEDIPIFPGEPFGLLGARAAQISGGKLNT 169
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ +++ + + ++ A + + A +P G +
Sbjct: 170 LLGRMDSIQRTPLKVNSHQLKRPTELDLTIDW--KELKANEIEALVNASNPGYGGAITTF 227
Query: 241 IGNKHERIKLLESQLVE-GEGKPGEVI----NPNFTIACSQ-GAVRIMRLQRAG 288
G++ + +++ +++ E G PG ++ N + C +R+ LQ G
Sbjct: 228 RGSQLKILEVSPAEVNEVGIFSPGTIVYSDPNYGVFVICGDYNCLRLNILQLEG 281
>gi|260947260|ref|XP_002617927.1| hypothetical protein CLUG_01386 [Clavispora lusitaniae ATCC 42720]
gi|238847799|gb|EEQ37263.1| hypothetical protein CLUG_01386 [Clavispora lusitaniae ATCC 42720]
Length = 337
Score = 71.1 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/307 (23%), Positives = 120/307 (39%), Gaps = 21/307 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHS----IVS--VYTQPPRPAGRRGLKSVLSAVHKK 54
M+LR+ F G+ F+VA+L L+ H I S V T+ +P GR+ V
Sbjct: 1 MSLRIAFFGSDAFSVASLARLLRLHHENPSLISSIDVVTRRIKPTGRKLTTFVDLPAGDF 60
Query: 55 AQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
A LP + N +AV V+YG +IP L+ G N H SLLP
Sbjct: 61 ATRHGLPLWRADSAEEILDIAPRGPNH-MAVAVSYGKLIPAEYLSQMGHGGLNVHPSLLP 119
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISS--NINTAGLQQELSV 172
+ G+AP+Q A+M +ETG+++ + + PI + N LQ LS
Sbjct: 120 MYSGSAPLQHALMDDVSETGVSVQTLHPTKFDKGAILAQTSPIPILEDDNYHSLQARLSE 179
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ A + ++K + + A+KI +++++ S+ + AL P
Sbjct: 180 VGADLLAHVLEKKLYVPPLSPIKSPYAYSLAKKILPETSQIDWRASSRTIKRLSDALGPL 239
Query: 233 PGAWLEMMIGNKHERIKLLESQLVE----------GEGKPGEV--INPNFTIACSQGAVR 280
+ +I K + + L + + PGE + G V
Sbjct: 240 HTFKMVDIIKKKKRVHQHYKVILDDIREHETTSILEKALPGEFAFSGNRILVKTGDGIVS 299
Query: 281 IMRLQRA 287
+ L+
Sbjct: 300 VGSLKFQ 306
>gi|194292196|ref|YP_002008103.1| formyltransferase [Cupriavidus taiwanensis LMG 19424]
gi|193226100|emb|CAQ72047.1| putative formyltransferase [Cupriavidus taiwanensis LMG 19424]
Length = 312
Score = 70.7 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 62/285 (21%), Positives = 103/285 (36%), Gaps = 10/285 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R V L+ L + + V T RP V A E +P
Sbjct: 1 MRAVVFAYHNVGDRCLRVLHARGVDVALVITHRDRP----DENIWFRRVADTATELGVPF 56
Query: 63 -LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ DV Y +IP +L G +N H SLLP++RG P
Sbjct: 57 IFGEDPADPSVEQAVRDARPDVIFSFYYRAMIPAGVLALAPGGAFNMHGSLLPKYRGRVP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A++ G+ ETG + M+ D G + VPI + + ++++V + A
Sbjct: 117 VNWAVLHGETETGATLHVMEARPDAGDIVDQTAVPILPDDTAGEVFEKVTVAAEQTLWRA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ + P P +Y + R+++ R A V+N IR P+PGA+ E+
Sbjct: 177 LPAMMAGQTPRRPNRLAEGSYYSGRKPEDGRIDWNRPAAEVYNLIRAVAPPYPGAFTELA 236
Query: 241 IGNKHE---RIKLLESQLVEGEGKPGEVINPNFTIA-CSQGAVRI 281
R L + + G + + C G + I
Sbjct: 237 GQRFIVAQARRPLPGAAPMPAGTPAGLQVRDGQVVGVCGDGGLII 281
>gi|238881282|gb|EEQ44920.1| hypothetical protein CAWG_03218 [Candida albicans WO-1]
Length = 359
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 56/308 (18%), Positives = 114/308 (37%), Gaps = 24/308 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALV----SSSHSI--VSVYTQPPRPAGRRGLKSVLSAVHKKA 55
L++ F G+ F+VA+L L+ + + V V T+ +P GR V K +
Sbjct: 26 PLKIAFFGSDNFSVASLNKLIQYQKKNPDKVDSVHVITRSLKPQGRYMKTVQDLPVGKFS 85
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ L + QE + + ++ + V+YG +IP + K G N H SLLP+
Sbjct: 86 SQQGLSI-MRADTSQEIRQLSEQYLFNLVIAVSYGRLIPSTFIQHCKYGGLNVHPSLLPK 144
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+ G++P+Q A++ D TG + + ++ I + + +
Sbjct: 145 YSGSSPLQYALLNDDKFTGCTVQTLHPTKFDHGDIIIQSSEILISDDDNSVSLFKKFGEI 204
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
+ + + +P IEN T + + + + + R
Sbjct: 205 GGDLLVKSIDQGLFVNPTP-IENNYTRSMAPKIPKAKSQVFWNKYSAREIKRLYDALGPI 263
Query: 236 WLEMMIGNKHERIKLLESQLV--------------EGEGKPGEV--INPNFTIACSQGAV 279
+ + + +R ++ E Q V E +PG+ + + +G V
Sbjct: 264 FTFLNVNVIRKRKQICEKQRVILSCVKEYQLTDSFEQLKEPGDFMLVEEGLLVKAKKGGV 323
Query: 280 RIMRLQRA 287
+ R++
Sbjct: 324 LVERIKMQ 331
>gi|259484785|tpe|CBF81303.1| TPA: methionyl-tRNA formyltransferase family protein, putative
(AFU_orthologue; AFUA_6G06920) [Aspergillus nidulans
FGSC A4]
Length = 398
Score = 70.7 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVS----SSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ F++A+L+AL I S V +P + GR + + A
Sbjct: 34 PLRILFCGSDHFSIASLKALHDEHKKRPDRIASIDVVCRPGKRVGRGMKQIREVPIKFVA 93
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP + + ++ V V++GL +P RILN + G N H SLLP
Sbjct: 94 SDLGLPIHEVDTFTGWQPPVYPHGPINLIVAVSFGLFVPPRILNGARYGGLNVHPSLLPD 153
Query: 116 WRGAAPIQR 124
+RG AP+
Sbjct: 154 FRGPAPLHH 162
>gi|320174984|gb|EFW50099.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella dysenteriae CDC 74-1112]
Length = 209
Score = 70.3 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 5/202 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + ++AL+++ + I +++T P G K+ +V A E +P
Sbjct: 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP----GEKAFYGSVAHLAAERGIPV 56
Query: 63 LVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
P + + + + ++ + +V Y +I IL G +N H SLLP++RG AP
Sbjct: 57 YAPDNVNHQLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFNLHGSLLPKYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ ++ G+ ETG+ + +M K D G + +V I+ + L +L + +
Sbjct: 117 LNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAITLHHKLCHAARQLLEQT 176
Query: 182 MDKLEQNNLPLSPQIENGITYA 203
+ ++ N+ Q EN T
Sbjct: 177 LPAIKHGNILEIAQRENEATCF 198
>gi|150376706|ref|YP_001313302.1| formyl transferase domain-containing protein [Sinorhizobium medicae
WSM419]
gi|150031253|gb|ABR63369.1| formyl transferase domain protein [Sinorhizobium medicae WSM419]
Length = 304
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 65/283 (22%), Positives = 121/283 (42%), Gaps = 16/283 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF+G E + L+AL+ + V T PP AGR S + A
Sbjct: 1 MRIVFVGAVESSKIALEALIKAGRPPALVITLPPEAAGRH---SDFVDLGNLALAAGSAV 57
Query: 63 LVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
T + E E + D+ +V+ + V + ++G H + LPR RG
Sbjct: 58 HHSTDINAPETLEAVTAVAPDLTLVIGWSQVCRRPFREIARVGTAGFHPAALPRLRGRGV 117
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I I+ G+ +TG + +D +D+GP+ R+ P+ + L + + A +VEA
Sbjct: 118 IPWTILRGEEKTGSTLFWLDDGVDSGPILLQRQFPVDPDETARSLYTKHTENLAQMIVEA 177
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
++E N + Q + +Y K + + +++ +SA ++ IR +P+PGA+
Sbjct: 178 AAQVEAGNAARAEQNQAEASYCAKRTAEDGLIDWRQSAASILRLIRAVGAPYPGAFTFY- 236
Query: 241 IGNKHERIKLLESQLVEGE-------GKPGEVINPNFTIACSQ 276
++I++ + VE G+ + F + C
Sbjct: 237 ---NGQKIRIDAAVPVENSSRFIGLTGQIQAITERGFIVLCGD 276
>gi|167918609|ref|ZP_02505700.1| hypothetical protein BpseBC_08645 [Burkholderia pseudomallei
BCC215]
Length = 253
Score = 70.3 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 60/264 (22%), Positives = 99/264 (37%), Gaps = 12/264 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDSPTE----HIWFGSVAAVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P + S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 AVITPADPAGADVRAALASAKPDFIFSFYYRHMLPVDLLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L P P + +Y + R+++ + A NV+N IRA++P +
Sbjct: 177 RVLPALLAGEAPHLPNDLSQGSYYGGRKPEDGRIDWTQPAANVYNLIRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQLVEGEGKPG 263
R + ++L PG
Sbjct: 234 FTDLGGTRFVIARARL----AAPG 253
>gi|116197769|ref|XP_001224696.1| hypothetical protein CHGG_07040 [Chaetomium globosum CBS 148.51]
gi|88178319|gb|EAQ85787.1| hypothetical protein CHGG_07040 [Chaetomium globosum CBS 148.51]
Length = 797
Score = 69.9 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALV-SSSHS---I--VSVYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ EF+ A+L+AL H+ I V V +P +P GR + + A
Sbjct: 390 PLRILFCGSDEFSCASLKALHHEHKHNSDLIRSVDVVVRPSKPTGRGYKVIREVPLRRLA 449
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ SLP V + + ++ + V++GL +P R+++A+K G N H SLLP
Sbjct: 450 EQLSLPIHVRDTFTGWDMPKPDGDPINLIIAVSFGLFVPPRLIHASKYGGLNVHPSLLPE 509
Query: 116 WR 117
Sbjct: 510 HH 511
>gi|308491212|ref|XP_003107797.1| hypothetical protein CRE_12553 [Caenorhabditis remanei]
gi|308249744|gb|EFO93696.1| hypothetical protein CRE_12553 [Caenorhabditis remanei]
Length = 908
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 69/319 (21%), Positives = 121/319 (37%), Gaps = 21/319 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLS----AVHKKAQ-E 57
+++ +G S F V + L + H +V V+T P + L + V K A+
Sbjct: 1 MKIAIIGQSAFGVDVYKELRKNGHEVVVVFTIPDKNGREDLLAIEAAKDGVPVQKPARWR 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
P + E E + S+NA++ V+ IP I A H S+LP+ R
Sbjct: 61 KKNPETGKFETLPEMLELYKSYNAELNVLPFCTQFIPLEITEAPPKKSIIYHPSILPKHR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GA+ I ++ GD E G++I D LDTGP+ +K + N L + A
Sbjct: 121 GASAINWTLIEGDEEAGLSIFWADDGLDTGPILLQKKCKVEENDTLNTLYKRFLYPAGVA 180
Query: 178 MVEAMDKLE---QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
V +L + + P+ ++++ + +HN IR PG
Sbjct: 181 AVAESVELIASGKAPRIVQPEEGASYEPYITTKPELAQIDWSKPQRQLHNFIRGNDKVPG 240
Query: 235 AWLEMMIGNKHER-IKLLESQLVEGEG-------KPG---EVINPNFTIACSQG-AVRIM 282
AW + KL + + + + PG V + + S G V +
Sbjct: 241 AWAILNGEKVSFFGSKLWKPKKLPDDAVEVAVSEVPGGKVLVEDRGLLLPGSDGKWVIVD 300
Query: 283 RLQRAGGRVLDIGDFLLGC 301
++ G +++ + G
Sbjct: 301 TVKI-GTKMIPASKYGQGA 318
>gi|255522011|ref|ZP_05389248.1| methionyl-tRNA formyltransferase [Listeria monocytogenes FSL
J1-175]
Length = 136
Score = 69.9 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLES 253
PQ +T+A IS+ + ++++ + + N IR LSP+P A+ + + K+ E+
Sbjct: 16 PQDPEKVTFARNISREQEKIDWTKPGRTIFNQIRGLSPWPVAYTTLEE----KPFKIWEA 71
Query: 254 QLVEGE--GKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDIGDFL--LGCPVIIG 306
E + G+PG ++ I G + + +Q AG +D+ F+ G +
Sbjct: 72 TYEETKEGGEPGAILADKTTLKIVAGDGTLIVPTVIQPAGKPKMDVHSFMTGAGRNLSKT 131
Query: 307 CIVG 310
G
Sbjct: 132 TRFG 135
>gi|167845350|ref|ZP_02470858.1| hypothetical protein BpseB_08673 [Burkholderia pseudomallei B7210]
gi|167893891|ref|ZP_02481293.1| hypothetical protein Bpse7_09046 [Burkholderia pseudomallei 7894]
Length = 252
Score = 69.5 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 5/232 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDSPTE----HIWFGSVAAVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P + S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 AVITPADPAGADVRAALASAKPDFIFSFYYRHMLPVDLLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
+ L P P + +Y + R+++ + A NV+N IRA++P
Sbjct: 177 RVLPALLAGEAPHLPNDLSQGSYYGGRKPEDGRIDWTQPAANVYNLIRAVAP 228
>gi|167823807|ref|ZP_02455278.1| hypothetical protein Bpseu9_09015 [Burkholderia pseudomallei 9]
Length = 243
Score = 69.5 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 5/232 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDSPTE----HIWFGSVAAVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P + S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 AVITPADPAGADVRAALASAKPDFIFSFYYRHMLPVDLLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
+ L P P + +Y + R+++ + A NV+N IRA++P
Sbjct: 177 RVLPALLAGEAPHLPNDLSQGSYYGGRKPEDGRIDWTQPAANVYNLIRAVAP 228
>gi|167815399|ref|ZP_02447079.1| hypothetical protein Bpse9_09659 [Burkholderia pseudomallei 91]
Length = 245
Score = 69.5 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 5/232 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDSPTE----HIWFGSVAAVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P + S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 AVITPADPAGADVRAALASAKPDFIFSFYYRHMLPVDLLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
+ L P P + +Y + R+++ + A NV+N IRA++P
Sbjct: 177 RVLPALLAGEAPHLPNDLSQGSYYGGRKPEDGRIDWTQPAANVYNLIRAVAP 228
>gi|167738210|ref|ZP_02410984.1| hypothetical protein Bpse14_09090 [Burkholderia pseudomallei 14]
Length = 251
Score = 69.5 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 5/232 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDSPTE----HIWFGSVAAVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P + S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 AVITPADPAGADVRAALASAKPDFIFSFYYRHMLPVDLLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
+ L P P + +Y + R+++ + A NV+N IRA++P
Sbjct: 177 RVLPALLAGEAPHLPNDLSQGSYYGGRKPEDGRIDWTQPAANVYNLIRAVAP 228
>gi|167719208|ref|ZP_02402444.1| hypothetical protein BpseD_09297 [Burkholderia pseudomallei DM98]
Length = 249
Score = 69.5 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 5/232 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E +
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDSPTE----HIWFGSVAAVAAEHGI 56
Query: 61 PALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P + S D Y ++P +L G YN H SLLP++RG
Sbjct: 57 AVITPADPAGADVRAALASAKPDFIFSFYYRHMLPVDLLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
+ L P P + +Y + R+++ + A NV+N IRA++P
Sbjct: 177 RVLPALLAGEAPHLPNDLSQGSYYGGRKPEDGRIDWTQPAANVYNLIRAVAP 228
>gi|226287897|gb|EEH43410.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 393
Score = 69.5 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 59/329 (17%), Positives = 117/329 (35%), Gaps = 42/329 (12%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHS----IVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ F++A+L L + I S V +P + GR + A
Sbjct: 31 PLRILFCGSDSFSIASLNTLYKEHVNNPETIASIDVVCRPGKRVGRGLKNFREVPIKAAA 90
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ SLP + + + ++ + V++GL +P RIL+ K G N H SLLP
Sbjct: 91 TQLSLPVHEIDTFTGWKPPRPQGADINLIIAVSFGLFVPHRILSTAKYGGLNVHPSLLPD 150
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+RG AP+ ++AG+ TG+ + +D + + P +I +L
Sbjct: 151 FRGPAPLHHTLLAGETRTGVTLQTLDAKKFDHGIILDQTPPPGFSIPDPDTCDVPRLLNL 210
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEK---------------ISKGETRVNFCRSAE 220
+ A +E + G+ + + +
Sbjct: 211 VSEKGAQMLVEGIRNRVFVPPLKGVGWLKPVEGVSLRYAGKITSEDRHINWKSWTADEIS 270
Query: 221 NVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEG--------EGKPGEV------- 265
+ L + ++H+R+ + ++V+ + PG V
Sbjct: 271 RCQRVLGLLWNNAVVRVAPGGNHEHKRVIFTKMEVVDSIPGSPCSTQIDPGLVFAVSDPE 330
Query: 266 -----INPNFTIACSQGAV-RIMRLQRAG 288
++ + + S + RI ++ G
Sbjct: 331 TETDGLDQSLYVTTSDKKIFRIHEIKVQG 359
>gi|225680249|gb|EEH18533.1| mitochondrial formyl-methionyl-tRNA transformylase
[Paracoccidioides brasiliensis Pb03]
Length = 393
Score = 69.5 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 59/329 (17%), Positives = 117/329 (35%), Gaps = 42/329 (12%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHS----IVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ F++A+L L + I S V +P + GR + A
Sbjct: 31 PLRILFCGSDSFSIASLNTLYKEHVNNPETIASIDVVCRPGKRVGRGLKNFREVPIKAAA 90
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ SLP + + + ++ + V++GL +P RIL+ K G N H SLLP
Sbjct: 91 TQLSLPVHEIDTFTGWKPPRPQGADINLIIAVSFGLFVPHRILSTAKYGGLNVHPSLLPD 150
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+RG AP+ ++AG+ TG+ + +D + + P +I +L
Sbjct: 151 FRGPAPLHHTLLAGETRTGVTLQTLDAKKFDHGIILDQTPPPGFSIPDPDTCDVPRLLNL 210
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEK---------------ISKGETRVNFCRSAE 220
+ A +E + G+ + + +
Sbjct: 211 VSEKGAQMLVEGIRNRVFVPPLKGVGWLKPVEGVSLRYAGKITSEDRHINWKSWTADEIS 270
Query: 221 NVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEG--------EGKPGEV------- 265
+ L + ++H+R+ + ++V+ + PG V
Sbjct: 271 RCQRVLGLLWNNAVVRVAPGGNHEHKRVIFTKMEVVDSIPGSPCSTQIDPGLVFAVPDPE 330
Query: 266 -----INPNFTIACSQGAV-RIMRLQRAG 288
++ + + S + RI ++ G
Sbjct: 331 TETDGLDQSLYVTTSDKKIFRIHEIKVQG 359
>gi|104304765|gb|ABF72470.1| WbmU [Bordetella parapertussis]
Length = 312
Score = 69.5 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 59/288 (20%), Positives = 113/288 (39%), Gaps = 11/288 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRP-----AGRRGLKSVLSAVHKKAQEF 58
R+ G+++ VA +A++ + H+I S T PRP + + S + V +
Sbjct: 3 RIALFGSTDITVAVAEAILRAGHAIAS-ITHVPRPFEISYSDKPVAISRQADVAQWCVAH 61
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
++PA+ + + + D+ VV + ++P R+ + +LG HAS LP RG
Sbjct: 62 AIPAIEYAGVDKSVEHFRNNPA-DLCVVAGWYHMLPSRLRDLFRLGAVGLHASRLPELRG 120
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP+ AI+AG T + + + +D GPV + + N L + +
Sbjct: 121 GAPLNWAILAGFERTAVTLFALGDGVDDGPVYGQEAIDVGPNDYIGELVARCNAASVVLV 180
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + +L + Q A++ + +A P+PGA
Sbjct: 181 ERCISGILDGSLVPAVQDGVASYGAQRSPEDGVIDWAAPAAGIARLVRAVSRPYPGASTW 240
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMR 283
+ + E + G PG+++ +A +GA+ I
Sbjct: 241 LDGRLVR-IWRAGEYRAAAVYGAPGQILCLPGGQVVVATGKGAIEIKE 287
>gi|289522602|ref|ZP_06439456.1| putative polymyxin resistance protein ArnA [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289504438|gb|EFD25602.1| putative polymyxin resistance protein ArnA [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 301
Score = 69.1 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 59/299 (19%), Positives = 121/299 (40%), Gaps = 31/299 (10%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLS-------AVHK 53
M + VF+G+ + L+ ++ S + V GL S +H+
Sbjct: 1 MK-KTVFIGSVMSSKIALETIIDSGVCVNLVC----------GLDENYSKNVSDYYPIHE 49
Query: 54 KAQEFSLPALVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
A E ++P + K+ E + + N D V+ +IP+ ILN H +
Sbjct: 50 IAVENNIPFVKFRKVDDMEIWKAIQLVNPDFIFVIGLSQIIPKSILNLANEYAIGFHPTP 109
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LP++RG A I I+ G +E+ +++ K+D+ +D+G + F I + + +++
Sbjct: 110 LPKFRGRAAIPWQILLGVSESKVSLFKLDEGVDSGDIIFQYPYKIDKDDYALDVYEKVCY 169
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSP 231
A+ + + + + Q E+ TY + ++N+ S E ++ IR P
Sbjct: 170 AMRIALHHCLTNIYNDTVNFIKQDEDEATYLLARRPEDGKINWHWSGEEIYTLIRATSKP 229
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGE---GKPGEVIN----PNFTIACSQGAVRIMR 283
+PGA+ +++ ++ L G PG++ + I + +
Sbjct: 230 YPGAFAYYKG----KKVIFWKANLERNNKYIGIPGQIAKINNNGDLGIVTKGSLLVVTE 284
>gi|291402848|ref|XP_002718236.1| PREDICTED: mitochondrial methionyl-tRNA formyltransferase
[Oryctolagus cuniculus]
Length = 325
Score = 69.1 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 68/297 (22%), Positives = 116/297 (39%), Gaps = 36/297 (12%)
Query: 19 QALVSSSHSIVSVYTQP-PRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFL 77
+AL+ + V T P P P G V + A + LP +
Sbjct: 10 EALIDR----LEVVTVPSPSPRGL--------PVKQFAAQAQLPVHEWPDV--------G 49
Query: 78 SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAI 137
+ DV VV ++G ++ + ++ G N H S LPRWRG API ++ GD TG+ I
Sbjct: 50 AGEYDVGVVASFGRLLSEALILKFPYGVLNVHPSCLPRWRGPAPIIHTVLHGDAVTGVTI 109
Query: 138 MKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQI 196
M++ D GP+ +P+S L+ LS L A+ ++ + L ++ Q
Sbjct: 110 MQIRPKRFDVGPIVKQETIPVSPRSTAKELEVVLSRLGANMLISVLKNLPESLNRARQQP 169
Query: 197 ENGITYAEKISKGETRVNFCRSAENVHNHIR--------ALSPFPGAWLEMMIGNKHERI 248
G+TYA KIS G + + + + + + ++++ +
Sbjct: 170 AEGVTYAPKISAGTSCIKWEEQTSEQIFRLYRAIGNIIPLQTLWMENTVKLLDLVEVNNS 229
Query: 249 KLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
L + +L PG VI + C G + + + + L DF G
Sbjct: 230 VLADLKLTGQTVTPGSVIYHKQLQILLVCCKDGWIGVRSVML--KKTLTATDFYNGY 284
>gi|86139210|ref|ZP_01057780.1| non-ribosomal peptide synthetase [Roseobacter sp. MED193]
gi|85824054|gb|EAQ44259.1| non-ribosomal peptide synthetase [Roseobacter sp. MED193]
Length = 1537
Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 61/293 (20%), Positives = 105/293 (35%), Gaps = 29/293 (9%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
V +G V +AL++ H I +V + + + A+ LP L
Sbjct: 7 VVIGNESLLVGCGEALLAQGHQISAVVS-------------TDADIRAWAKGKDLPLLTN 53
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
+ D + +A VIP+ IL+ + G N H LPR+ G A
Sbjct: 54 PDEIT--------HDFDWLLSIANLRVIPESILSLARKGAVNFHDGPLPRYAGLNTPNWA 105
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
++AG+ + GI M+ +D G + R I+ + L + + E +D+L
Sbjct: 106 LIAGEAQHGITWHMMEGGIDEGDILAQRLFDIAEDDTAFSLNSKCYAAAMDSFGEVLDQL 165
Query: 186 EQNNLPLSPQIENGITYAEKISKGET----RVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
N L PQ + +Y K + + + I
Sbjct: 166 SANALQRQPQDLSQRSYFAKDHRPAAGGILDFSKTSQNLTRLVRGLDYGSYWNPLGCAKI 225
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQ-RAGGR 290
+ +++ + EG G G V++ TIA + GAV + L AG +
Sbjct: 226 VLAAQVLRVGRAGPAEGSGPIGTVLSVTGAVVTIATADGAVALEDLTSLAGKK 278
>gi|33594843|ref|NP_882486.1| putative formyl transferase [Bordetella parapertussis 12822]
gi|33564919|emb|CAE39865.1| putative formyl transferase [Bordetella parapertussis]
Length = 312
Score = 69.1 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 59/288 (20%), Positives = 113/288 (39%), Gaps = 11/288 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRP-----AGRRGLKSVLSAVHKKAQEF 58
R+ G+++ VA +A++ + H+I S T PRP + + S + V +
Sbjct: 3 RIALFGSTDITVAVAEAILRAGHAIAS-ITHVPRPFEISYSDKPVAISRQADVAQWCVAH 61
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
++PA+ + + + D+ VV + ++P R+ + +LG HAS LP RG
Sbjct: 62 AIPAIEYAGVDKSVEHFRNNPA-DLCVVAGWYHMLPSRLRDLFRLGAVGLHASRLPELRG 120
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP+ AI+AG T + + + +D GPV + + N L + +
Sbjct: 121 GAPLNWAILAGFERTAVTLFALGDGVDDGPVYGQEAIDVGPNDYIGELVARCNAASVVLV 180
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + +L + Q A++ + +A P+PGA
Sbjct: 181 ERCISGILDGSLVPAVQDGVASYGAQRSPEDGVIDWAAPAAGIARLVRAVSRPYPGASTW 240
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMR 283
+ + E + G PG+++ +A +GA+ I
Sbjct: 241 LDGRLVR-IWRAGEYRAAAVYGAPGQILCLPGGQVVVATGKGAIEIEE 287
>gi|321469542|gb|EFX80522.1| hypothetical protein DAPPUDRAFT_318593 [Daphnia pulex]
Length = 324
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 75/314 (23%), Positives = 125/314 (39%), Gaps = 32/314 (10%)
Query: 7 FMGTSEFAVATLQALVSSSHS---I--VSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
F GT FA+ +L+ L + + +SV P+P V K A++ +LP
Sbjct: 2 FFGTDGFALKSLEELHRAMQDGSMVSELSVVVPTPKPH--------PCLVAKYAKQHNLP 53
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
V +++ + D VV ++G +IP RI+N LG N H S+LPRWRGAAP
Sbjct: 54 ISVWPLPKEKQNDC-----CDFGVVASFGHLIPSRIINGFPLGMLNIHGSILPRWRGAAP 108
Query: 122 IQRAIMAGDNETGIAIMKMD-KHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
+ A+M GD ETG+ IM++ H D G + + I +I+ L L+ + A+ +V
Sbjct: 109 VVHAVMNGDAETGVTIMRIKPHHFDVGDIVAQESIAIDPHISAVQLTDRLAGMGANLLVR 168
Query: 181 AMDKLEQNNLPLSPQIEN--------GITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ L + +PQ + + G + + + F
Sbjct: 169 CISDLHYHLDRCTPQPSHGVTLAPKIDAKLSHIDWTGLNAAQIYNRWRATCHLFKLQTFF 228
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACS-QGAVRIMRLQRA 287
GA +++ E + +PG ++ + C V I +
Sbjct: 229 HGANVKLNAVEPPTTEPFAEMLQNLVDVRPGRIVVDRTRNLLFVRCQEDQWVAIRHVTLH 288
Query: 288 GGRVLDIGDFLLGC 301
V+ DF G
Sbjct: 289 RRPVMSALDFSNGY 302
>gi|307319325|ref|ZP_07598753.1| formyl transferase domain protein [Sinorhizobium meliloti AK83]
gi|306894947|gb|EFN25705.1| formyl transferase domain protein [Sinorhizobium meliloti AK83]
Length = 312
Score = 68.8 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 70/283 (24%), Positives = 121/283 (42%), Gaps = 14/283 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF+G E + L AL+ + + V V T PP AGR L + + A
Sbjct: 1 MRIVFVGAVESSKVALDALIRAKRTPVLVITLPPEAAGRHSDFVGLGEIGRAAGSAI--H 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
Q E + D+++V+ + V Q + G H + LPR RG I
Sbjct: 59 HTTDINSQATLEAVAAVAPDLSLVIGWSQVCRQAFREIARAGTVGFHPAALPRLRGRGVI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
I+ G+ TG + +D +D+GP+ R+ P++ + L + + A +VEA
Sbjct: 119 PWTILRGEERTGSTLFWLDDGIDSGPILLQRQFPVAPDETARSLYTKHTENLAEMVVEAA 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMMI 241
++E N Q E +Y K + + R+++ A ++ IRA P+PGA+
Sbjct: 179 AQVEAGNAARMEQNEAEASYCAKRTAEDGRIDWHDPAASILRLIRAAGDPYPGAFTFYKG 238
Query: 242 GNKHERIKLLESQLVEGE----GKPGEV---INPNFTIACSQG 277
++I++ + VE G G++ F + C G
Sbjct: 239 ----QKIRIDAATPVENSRQYIGLKGQIQAHTERGFIVLCGDG 277
>gi|254882161|ref|ZP_05254871.1| formyl transferase, C-terminal domain-containing protein
[Bacteroides sp. 4_3_47FAA]
gi|254834954|gb|EET15263.1| formyl transferase, C-terminal domain-containing protein
[Bacteroides sp. 4_3_47FAA]
Length = 117
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 200 ITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI-GNKHERIKLLESQLVEG 258
+ A KI K R+++ + + +++ IR LSP+P AW E+ + + +K+ E++ V
Sbjct: 1 MRPAPKIFKETCRIDWNKGVKQIYDFIRGLSPYPAAWTELCVADGTRQVLKIYETEKVFA 60
Query: 259 EGK--PGEV---INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+ G++ + F +A G + ++ LQ AG + +++ DFL G
Sbjct: 61 SHEMNIGDIRTDMKTYFQVAVKDGFINVLTLQLAGKKRMNVADFLRGYR 109
>gi|163738287|ref|ZP_02145702.1| Amino acid adenylation [Phaeobacter gallaeciensis BS107]
gi|161388208|gb|EDQ12562.1| Amino acid adenylation [Phaeobacter gallaeciensis BS107]
Length = 1544
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 62/315 (19%), Positives = 113/315 (35%), Gaps = 37/315 (11%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
+ +G VA L++ SHSI +V T + A R + A + L L
Sbjct: 7 IVLGNESLLVACADMLLARSHSIAAVVT---KDAEIR----------QWAADKGLSVLED 53
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
+ + D + +A +IP +L G N H LPR+ G A
Sbjct: 54 ARDFG--------GSVDWLLSIANLEIIPDSVLARASKGGVNFHDGPLPRYAGLNTPNWA 105
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
++ G E GI ++ +D G + R I+ + L + + + + +L
Sbjct: 106 LIEGATEYGITWHMIEGGVDEGDILAQRLFAIAGDETAYSLNAKCYAAAMDSFGDVLGQL 165
Query: 186 EQNNLPLSPQIENGITYAEKISKGE--------TRVNFCRSAENVHNHIRALSPFPGAWL 237
E L Q + + ++ E + +P A +
Sbjct: 166 ETGTLARQAQDFSTRKLYTRANRPEAGALLDLTQPAADLYRLVRALDFNGYWNPLCAAKV 225
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDI 294
++ + + +++ EG G PG V++ T+AC GA+R+ L + GR +
Sbjct: 226 QLSANSGVPIALIGTAEIAEGSGVPGTVLSVDAKTVTLACGDGALRLGGLHHSDGRPIRA 285
Query: 295 GDFLLGCPVIIGCIV 309
D V G ++
Sbjct: 286 TD-----HVQTGDVL 295
>gi|261206382|ref|XP_002627928.1| methionyl-tRNA formyltransferase [Ajellomyces dermatitidis
SLH14081]
gi|239592987|gb|EEQ75568.1| methionyl-tRNA formyltransferase [Ajellomyces dermatitidis
SLH14081]
gi|239610836|gb|EEQ87823.1| methionyl-tRNA formyltransferase [Ajellomyces dermatitidis ER-3]
gi|327350368|gb|EGE79225.1| methionyl-tRNA formyltransferase [Ajellomyces dermatitidis ATCC
18188]
Length = 398
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALV----SSSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ F++A+L+AL ++ SI S V +P + GR + A
Sbjct: 35 PLRILFCGSDSFSIASLKALCKERGNNPESIASIDVVCRPGKRVGRGLKNIQEVPIKASA 94
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
SLP + Q ++ V V++GL IP RIL++ K G N H SLLP
Sbjct: 95 THLSLPIHEIDTFTGWKPPQPQGHPINLIVAVSFGLFIPPRILSSAKYGGLNVHPSLLPD 154
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQ 167
+RG AP+ ++AG+ +TG+ + +D V + P +I
Sbjct: 155 FRGPAPLHHTLLAGETKTGVTLQTLDPREFDHGVILDQTPPPGFSIPDPDTC 206
>gi|294625235|ref|ZP_06703875.1| methionyl-tRNA formyltransferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600463|gb|EFF44560.1| methionyl-tRNA formyltransferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 162
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 193 SPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLE 252
PQ +G+TYA K+ K + R+++ + A+ + +RA +P+P E ++ + R+
Sbjct: 46 QPQPADGVTYAHKLDKAQARLDWAQPAQELARRVRAFNPWPV--AEAILAGERVRLHGAV 103
Query: 253 SQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+ + + PG ++ IAC +GA+R+ LQR GG+ + D+L
Sbjct: 104 ALELAHQQPPGTLLAASKQGIDIACGEGALRVRVLQREGGKAITAADYLNARR 156
>gi|330813091|ref|YP_004357330.1| formyltransferase, putative [Candidatus Pelagibacter sp. IMCC9063]
gi|327486186|gb|AEA80591.1| formyltransferase, putative [Candidatus Pelagibacter sp. IMCC9063]
Length = 302
Score = 68.8 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 51/306 (16%), Positives = 119/306 (38%), Gaps = 16/306 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ +VF+G +F+ L L++ + +I + T + + S + A+ ++P
Sbjct: 3 KINIVFIGCVQFSKTVLIELLNQNVNITGICT-----KKKNIFNADFSDLSGLAKAKNIP 57
Query: 62 -ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+E Y S D + + +I ++ILN K H + +++G
Sbjct: 58 YIFWKNNCDKEMYSWIKSKKPDFIFCIGWSNIISKKILNLAKYYSIGYHPLDINKYKGRH 117
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
PI AI+ G + M K DTG + + + S N++ + ++L ++ + +
Sbjct: 118 PIIWAIILGLKKISPTFFVMSKFADTGKILSQKNFVLKSGHNSSYVYEKLKLVAKGQVSD 177
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS-----PFPGA 235
+ K+ +N + K R + + P +
Sbjct: 178 VIKKIIKNKNKIKFNHSELKKKFNKGFFLRKRSFNDGQIDWRMSAKSIQRLVNALSKPYS 237
Query: 236 WLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVL 292
+ G K+ ++K ++ + + +PG+VI + N I + A++++ + +
Sbjct: 238 YASFTYGGKNFKVKSVKIIKTKVKEEPGKVILLKSKNPIIRTGENAIKLIDIYP--KKSF 295
Query: 293 DIGDFL 298
+ ++L
Sbjct: 296 KLNEYL 301
>gi|225560559|gb|EEH08840.1| mitochondrial formyl-methionyl-tRNA transformylase [Ajellomyces
capsulatus G186AR]
Length = 405
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALV----SSSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ F++A+L+AL +S +I S V +P + GR + A
Sbjct: 35 PLRILFCGSDSFSIASLKALCRERANSPETIASIDVVCRPGKRVGRGLKTIREVPIKAAA 94
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ SLP + + ++ + V++GL +P RILNA K G N H SLLP
Sbjct: 95 TQLSLPIHEIDTFTGWKPPKPQGDPINLIIAVSFGLFVPPRILNAAKYGGLNVHPSLLPD 154
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQ 167
+RG AP+ ++AG+ TG+ + +D V + P +I
Sbjct: 155 FRGPAPLHHTLLAGETRTGVTLQTLDTRDFDHGVILDQTPPPGFSIPDPDTC 206
>gi|240280121|gb|EER43625.1| mitochondrial formyl-methionyl-tRNA transformylase [Ajellomyces
capsulatus H143]
Length = 353
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALV----SSSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
L+++F G+ F++A+L+AL +S +I S V +P + GR + A
Sbjct: 35 PLKILFCGSDSFSIASLKALCRERANSPETIASIDVVCRPGKRVGRGLKTIREVPIKAAA 94
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ SLP + + ++ + V++GL +P RILNA K G N H SLLP
Sbjct: 95 TQLSLPIHEIDTFTGWKPPKPQGDPINLIIAVSFGLFVPPRILNAAKYGGLNVHPSLLPD 154
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQ 167
+RG AP+ ++AG+ TG+ + +D V + P +I
Sbjct: 155 FRGPAPLHHTLLAGETRTGVTLQTLDTRDFDHGVILDQTPPPGFSIPDPDTC 206
>gi|312381582|gb|EFR27297.1| hypothetical protein AND_06089 [Anopheles darlingi]
Length = 924
Score = 68.4 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 65/319 (20%), Positives = 117/319 (36%), Gaps = 31/319 (9%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
L++ +G S FA L+ L+ H +V V+T + G R + A++ +P
Sbjct: 4 LKIAIIGQSNFAAEVLELLLEREHIVVGVFTIADK--GNR-----EDVLATTARQHRIPV 56
Query: 63 LVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ ++ + S A++ V+ IP +++ G H S+LP
Sbjct: 57 FKFSAWRRKGVPIPEVLEKYRSVGANLNVLPFCSQFIPMEVIDGASYGSICYHPSILPLH 116
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGA+ I ++ GD G + D LDTGP+ ++ P+ S+ L +
Sbjct: 117 RGASAIAWTLIDGDERAGFTVFWADDGLDTGPILLQKQCPVYSDDTLDTLYKRFLYPEGV 176
Query: 177 AMV-EAMDKLEQNNLPLSPQIE---NGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ EA+D + P PQ E + + +N P
Sbjct: 177 TAMGEAVDMIAAGTAPKIPQTEIGASYDPALFREENQYLNLNRRALDIFNFIRGLDSVPG 236
Query: 233 PGAWLE----------MMIGNKHERIKLLESQLVEGEGKPGE--VINPNFTI-ACSQGAV 279
A +E + + R L + + +G PGE V I V
Sbjct: 237 ALAIIETENGAEVPVRLFGASLSARRSLASGKPIHFKGAPGEAYVTKEGIFINGTDDQLV 296
Query: 280 RIMRLQRAGGRVLDIGDFL 298
++ RL+R G +++ +
Sbjct: 297 KVKRLKR-GNKMIQASQWF 314
>gi|295659550|ref|XP_002790333.1| methionyl-tRNA formyltransferase [Paracoccidioides brasiliensis
Pb01]
gi|226281785|gb|EEH37351.1| methionyl-tRNA formyltransferase [Paracoccidioides brasiliensis
Pb01]
Length = 393
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 6/172 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVS------VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ F++A+L +L + V +P + GR + A
Sbjct: 31 PLRILFCGSDNFSIASLNSLYKEHVNNPGTIASIDVVCRPGKRVGRGLKTFREVPIKAAA 90
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ SLP + + + ++ + V++GL +PQRIL+ K G N H SLLP
Sbjct: 91 TQLSLPIHEIDTFTGWKPPRPQGADINLIIAVSFGLFVPQRILSTAKYGGLNVHPSLLPD 150
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQ 167
+RG AP+ ++AG+ TG+ + +D + + P +I
Sbjct: 151 FRGPAPLHHTLLAGETRTGVTLQTLDAKKFDHGMILDQTPPPGFSIPDPDTC 202
>gi|16264487|ref|NP_437279.1| putative formyltransferase, methionyl-tRNA(fMet)
N-formyltransferase protein [Sinorhizobium meliloti
1021]
gi|307307664|ref|ZP_07587396.1| formyl transferase domain protein [Sinorhizobium meliloti BL225C]
gi|15140624|emb|CAC49139.1| methionyl-tRNA formyltransferase [Sinorhizobium meliloti 1021]
gi|306901790|gb|EFN32391.1| formyl transferase domain protein [Sinorhizobium meliloti BL225C]
Length = 312
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 14/283 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF+G E + L AL+ + + V V T PP AGR L + + A
Sbjct: 1 MRIVFVGAVESSKIALDALIRAKRTPVLVITLPPEAAGRHSDFVGLGEIGRAAGSAI--H 58
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
Q E + D+++V+ + V Q + G H + LPR RG I
Sbjct: 59 HTTDINSQATLEAVAAATPDLSLVIGWSQVCRQAFREIARAGTVGFHPAALPRLRGRGVI 118
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
I+ G+ TG + +D +D+GP+ R+ P++ + L + + A +VEA
Sbjct: 119 PWTILRGEERTGSTLFWLDDGIDSGPILLQRQFPVAPDETARSLYTKHTENLAEMVVEAA 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMMI 241
++E + Q E +Y K + + R+++ A ++ IRA P+PGA+
Sbjct: 179 AQVEAGSAARMEQNEAEASYCAKRTAEDGRIDWHDPAASILRLIRAAGDPYPGAFTFYKG 238
Query: 242 GNKHERIKLLESQLVEGE----GKPGEV---INPNFTIACSQG 277
++I++ + VE G G++ F + C G
Sbjct: 239 ----QKIRIDAATPVENSRQYIGLKGQIQAHTERGFIVLCGDG 277
>gi|325088841|gb|EGC42151.1| mitochondrial formyl-methionyl-tRNA transformylase [Ajellomyces
capsulatus H88]
Length = 404
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALV----SSSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
L+++F G+ F++A+L+AL +S +I S V +P + GR + A
Sbjct: 35 PLKILFCGSDSFSIASLKALCRERANSPETIASIDVVCRPGKRVGRGLKTIREVPIKAAA 94
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ SLP + + ++ + V++GL +P RILNA K G N H SLLP
Sbjct: 95 SQLSLPIHEIDTFTGWKPPKPKGDPINLIIAVSFGLFVPPRILNAAKYGGLNVHPSLLPD 154
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQ 167
+RG AP+ ++AG+ TG+ + +D V + P +I
Sbjct: 155 FRGPAPLHHTLLAGETRTGVTLQTLDTRDFDHGVILDQTPPPGFSIPDPDTC 206
>gi|308452202|ref|XP_003088952.1| hypothetical protein CRE_13827 [Caenorhabditis remanei]
gi|308244188|gb|EFO88140.1| hypothetical protein CRE_13827 [Caenorhabditis remanei]
Length = 915
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 67/328 (20%), Positives = 124/328 (37%), Gaps = 32/328 (9%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPR--PAGRRGLKSVLSAVHKKAQEFSL 60
+++ +G S F V + L + H +V V+T P + G+ + A + +
Sbjct: 1 MKIAIIGQSAFGVDVYKELRKNGHEVVVVFTIPDKNGREDLLGMTYKNYPIE--AAKDGV 58
Query: 61 PALVPTKLGQEEYEQ------------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNG 108
P P + ++ E + S+NA++ V+ IP I A
Sbjct: 59 PVQKPARWRKKNPETGKFETLPEMLELYKSYNAELNVLPFCTQFIPLEITEAPPKKSIIY 118
Query: 109 HASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQ 168
H S+LP+ RGA+ I ++ GD E G++I D LDTGP+ +K + N L +
Sbjct: 119 HPSILPKHRGASAINWTLIEGDEEAGLSIFWADDGLDTGPILLQKKCKVEENDTLNTLYK 178
Query: 169 ELSVLCAHAMVEAMDKLE---QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNH 225
A V +L + + P+ ++++ ++ +HN
Sbjct: 179 RFLYPAGVAAVAESVELIASGKAPRIVQPEEGASYEPYITTKPELAQIDWSKTQRQLHNF 238
Query: 226 IRALSPFPGAWLEMMIGNKHER-IKLLESQLVEGEG-------KPG---EVINPNFTIAC 274
IR PGAW + KL + + + + PG V + +
Sbjct: 239 IRGNDKVPGAWAILNGEKVSFFGSKLWKPKKLPEDAVEVAVSEVPGGKVLVEDCGLLLPG 298
Query: 275 SQG-AVRIMRLQRAGGRVLDIGDFLLGC 301
S G V + ++ G +++ + G
Sbjct: 299 SDGKWVIVDTVKI-GTKMIPASKYGQGA 325
>gi|28571984|ref|NP_788772.1| CG1750, isoform B [Drosophila melanogaster]
gi|28381518|gb|AAO41619.1| CG1750, isoform B [Drosophila melanogaster]
Length = 295
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 77/282 (27%), Positives = 130/282 (46%), Gaps = 27/282 (9%)
Query: 29 VSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVA 88
+ V T KS + V A++ LP + + + D+ VVV+
Sbjct: 15 LGVVTS---------FKSPANCVRTYAEKEKLPL------QKWPIDPSVCPQFDLGVVVS 59
Query: 89 YGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKH-LDTG 147
+G +IP I+N G N HASLLP+WRGAAPI AIM GD TG++IMK++ H D G
Sbjct: 60 FGHLIPGSIINGFPYGMINVHASLLPKWRGAAPIIYAIMKGDASTGVSIMKIEPHRFDIG 119
Query: 148 PVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKIS 207
+ R+V I+ ++ L L+ L A +V+ ++ L PQ + ++YA KI+
Sbjct: 120 DILAQREVAINPDVFMPDLHASLASLGAELLVDTINNLSVRLKEAKPQDSSRVSYAPKIT 179
Query: 208 KGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGE---GKPGE 264
T + + I + + ++++LLE +L E +PG
Sbjct: 180 SKITEIIWSE---LSAIEIYTRHRALYGYKNLTTNFLGKQVQLLELRLPEKRVPVQEPGA 236
Query: 265 VI----NPNFTIACSQGA-VRIMRLQRAGGRVLDIGDFLLGC 301
+ + + I C+Q + + +++L+ G + + DF G
Sbjct: 237 ISYLRKSRSLIIGCAQQSQLEVLQLRVEGRKPMSAQDFNNGF 278
>gi|301596688|ref|ZP_07241696.1| methionyl-tRNA formyltransferase [Acinetobacter baumannii AB059]
Length = 174
Score = 68.0 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 195 QIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQ 254
Q E+ YA K+ K E R+++ +A V +IRA +P+P A++++ N + S
Sbjct: 55 QDESLTVYAHKLVKSEARIDWSMNAVQVDRNIRAFNPWPVAFIQLDENNALRVWNSIISS 114
Query: 255 LVEGEGKPGEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ + GE+I +AC + + + +Q GG+ L+ + +G I+
Sbjct: 115 QSKVNAQAGEIIAIDKQGVHVACGENTFICLTSVQWPGGKALNAQQIAQTQKLHVGQIL 173
>gi|330861107|emb|CBX71373.1| hypothetical protein YEW_HM33760 [Yersinia enterocolitica W22703]
Length = 89
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + A L+ALV + + I +V+T P R S+V + A + LP
Sbjct: 1 MKAIVFAYHDIGCAGLKALVEAGYDIQAVFTHTDSPNENR----FFSSVARVAADLDLPV 56
Query: 63 LVPTKLGQEEYEQFLSFNADVAVV 86
P + + + + +
Sbjct: 57 FAPEDVNHPLWIERIQQLQPDIIF 80
>gi|171693781|ref|XP_001911815.1| hypothetical protein [Podospora anserina S mat+]
gi|170946839|emb|CAP73643.1| unnamed protein product [Podospora anserina S mat+]
Length = 389
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 10/151 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ EF+ +L+AL + V +P +P GR + + A
Sbjct: 30 PLRILFCGSDEFSCHSLKALHKKHKDDPSLIESIDVLVRPSKPTGRGLKQVTEVPIASVA 89
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+E LP + + ++ + + V++G +P R+LN + G N H SLLP
Sbjct: 90 RELGLPLSTLPHDTFTNWFKCIN----LIIAVSFGRFVPPRLLNQAEYGGLNVHPSLLPD 145
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDT 146
RG AP+ A++ TG++I + H
Sbjct: 146 LRGPAPLHYALLNRYTHTGVSIQTLSPHSFD 176
>gi|154292790|ref|XP_001546965.1| hypothetical protein BC1G_14302 [Botryotinia fuckeliana B05.10]
gi|150845783|gb|EDN20976.1| hypothetical protein BC1G_14302 [Botryotinia fuckeliana B05.10]
Length = 513
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 58/270 (21%), Positives = 105/270 (38%), Gaps = 6/270 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVS------SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ EF+ +L++LV+ + + V +P + GR + + K A
Sbjct: 46 PLRILFCGSDEFSCESLRSLVAEKRSDPKGIASIDVLVRPGKKTGRGMKEIREVPLKKLA 105
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+E +L + + ++ V V++GL +P RILN+ + G N H SLLP+
Sbjct: 106 KELNLRIHERDTFTGWDLPKPNGEPINLVVAVSFGLFVPPRILNSAEYGGINVHPSLLPQ 165
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+RG+AP+ IM GD TG+++ +D H ++ T Q L ++
Sbjct: 166 YRGSAPLHHTIMNGDTITGVSLQTLDPHKFDHGAILSQEGFPIPQSQTIKYQGLLDLVTP 225
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
A + + + + NV RAL
Sbjct: 226 KAASLLAKGIRDRVFISPEPDQGLKLAHKVKPIDRFIDFEEGLSINVERKFRALGRLWCY 285
Query: 236 WLEMMIGNKHERIKLLESQLVEGEGKPGEV 265
G +R + ++V + G +
Sbjct: 286 TRTWWSGKNKKRTMFEDFEVVPMPKQTGVI 315
>gi|238488000|ref|XP_002375238.1| methionyl-tRNA formyltransferase family protein, putative
[Aspergillus flavus NRRL3357]
gi|220700117|gb|EED56456.1| methionyl-tRNA formyltransferase family protein, putative
[Aspergillus flavus NRRL3357]
Length = 397
Score = 67.6 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/330 (19%), Positives = 109/330 (33%), Gaps = 45/330 (13%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHS----IVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ EF++A+L AL I S V +P + G RGLK +L + A
Sbjct: 34 PLRILFCGSDEFSIASLNALHKEHLDRPDRISSIDVVCRPGKRVG-RGLKKIL-PIKAAA 91
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ SLP ++ V V++GL +P RIL+ K G N H SLLP
Sbjct: 92 TDLSLPVHEIDTFRGWTPPVLPGGPINLIVAVSFGLFVPPRILHGAKYGGLNVHPSLLPD 151
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQ-------- 167
+RG AP+ ++AG TG+ + +D V + I
Sbjct: 152 FRGPAPLHHTLLAGRTRTGVTLQTLDLKDFDHGVILQQTPSPGFEIPNPESCTVPELLNL 211
Query: 168 -----------------QELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGE 210
V A + + + P+ +
Sbjct: 212 VAPKGAEILVDGIRKGLFVPPVHDAGWRSPEEHESLIHAAKIKPEDRHIDWANWTWLDIS 271
Query: 211 TRVNFCRSAENVHNHIR--ALSPFPGAWLEMMIGNKHERIKLLESQL---------VEGE 259
R+ + I +P + ++ E + S+ V+G
Sbjct: 272 RRIRVLGPLWSKALVINDATANPSSFQYRRVIFTEMEEVEPMKGSEAYAVVPGLPFVDGA 331
Query: 260 GKPGEVINPNFTIACSQG-AVRIMRLQRAG 288
+ G +RI +++ G
Sbjct: 332 HPIESRQGKGVYVFTQDGKLLRINQMKVEG 361
>gi|119598113|gb|EAW77707.1| mitochondrial methionyl-tRNA formyltransferase, isoform CRA_b [Homo
sapiens]
Length = 440
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 78/365 (21%), Positives = 130/365 (35%), Gaps = 80/365 (21%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHS-----------IVSVYTQPPRPA------------- 39
RV+F GT +FA L+AL ++ + + + P RPA
Sbjct: 49 RVLFFGTDQFAREALRALHAARYPGQGSGDPAAEGLQA---APGRPAPRVLDFWLRKAWA 105
Query: 40 ----GRRGLKS----------------------VLSA----VHKKAQEFSLPALVPTKLG 69
G R + S V + A + LP
Sbjct: 106 AERCGPRSRRLLAPRRENKEEELIDKLEVVTMPSPSPKGLPVKQYAVQSQLPVY------ 159
Query: 70 QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAG 129
E+ S DV VV ++G ++ + ++ G N H S LPRWRG AP+ ++ G
Sbjct: 160 --EWPDVGSGEYDVGVVASFGRLLNEALILKFPYGILNVHPSCLPRWRGPAPVIHTVLHG 217
Query: 130 DNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQN 188
D TG+ IM++ D GP+ VP+ L+ LS L A+ ++ + L ++
Sbjct: 218 DTVTGVTIMQIRPKRFDVGPILKQETVPVPPKSTAKELEAVLSRLGANMLISVLKNLPES 277
Query: 189 NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR--------ALSPFPGAWLEMM 240
Q G TYA KIS G + + + + + + ++++
Sbjct: 278 LSNGRQQPMEGATYAPKISAGTSCIKWEEQTSEQIFRLYRAIGNIIPLQTLWMANTIKLL 337
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ L + +L PG VI + C G + + + + L D
Sbjct: 338 DLVEVNSSVLADPKLTGQALIPGSVIYHKQSQILLVYCKDGWIGVRSVML--KKSLTATD 395
Query: 297 FLLGC 301
F G
Sbjct: 396 FYNGY 400
>gi|39974151|ref|XP_368466.1| hypothetical protein MGG_00778 [Magnaporthe oryzae 70-15]
gi|145018286|gb|EDK02565.1| hypothetical protein MGG_00778 [Magnaporthe oryzae 70-15]
Length = 481
Score = 67.2 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/155 (30%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 2 TLRVVFMGTSEFAVATLQAL----------VSSSHSIVSVYTQPPRPAGRRGLKSVLSAV 51
LR++F G+ F+ +L+AL V S + V T+PP+ GR + +
Sbjct: 39 PLRILFCGSDAFSCESLRALDKVRRSEPQLVKS----IDVVTRPPKRTGRGLKVIRHAPI 94
Query: 52 HKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
A + LP E ++ + V++GL IP RIL A K G N H S
Sbjct: 95 ETLATDLQLPVHPLDSFRGWELPLVDGEAINLIIAVSFGLFIPSRILKAVKYGGLNLHPS 154
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDT 146
LP RG+APIQ AIM TG+ + +D
Sbjct: 155 FLPDLRGSAPIQWAIMLDRQHTGVTLQTLDDKAFD 189
>gi|268536246|ref|XP_002633258.1| C. briggsae CBR-ALH-3 protein [Caenorhabditis briggsae]
Length = 908
Score = 66.8 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 73/319 (22%), Positives = 120/319 (37%), Gaps = 21/319 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLS----AVHKKAQ-E 57
+++ +G S F V + L + H IV V+T P + L + V K A+
Sbjct: 1 MKIAIIGQSAFGVDVYKELRKNGHEIVVVFTIPDKNGREDLLAVEAAKDGVPVQKPARWR 60
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
P + E E + SF A++ V+ IP I A H S+LP+ R
Sbjct: 61 KKNPETGKFETLPEMLELYKSFGAELNVLPFCTQFIPLEITEAPPKKSIIYHPSILPKHR 120
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCAH 176
GA+ I ++ GD E G++I D LDTGP+ +K + N L +
Sbjct: 121 GASAINWTLIEGDEEAGLSIFWADDGLDTGPILLQKKCKVEENDTLNTLYKRFLYPAGVA 180
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRA-------- 228
A+ E+++ + N P Q E G +Y I+ S H
Sbjct: 181 AVAESVELIASGNAPRIVQPEEGASYEPYITTKPELAQIDWSKTQRQLHNFIRGNDKVPG 240
Query: 229 -LSPFPGAWLEMMIGNKHERIKLLE--SQLVEGEGKPGEVI--NPNFTIACSQG-AVRIM 282
S F G + + KL E ++ E G+V+ + + S G V +
Sbjct: 241 AWSIFNGERVSFFGSKLWKPKKLPEDAVEVAVAEVPGGKVLVEDRGLLLPGSDGKWVIVD 300
Query: 283 RLQRAGGRVLDIGDFLLGC 301
++ G + + + G
Sbjct: 301 TVKI-GTKTIPASKYGQGA 318
>gi|47210430|emb|CAF89773.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1002
Score = 66.8 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 52/242 (21%), Positives = 87/242 (35%), Gaps = 14/242 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ +G S F +L H +V V+T P + + A++ P
Sbjct: 11 KLKLAIIGQSLFGQEVYSSLRKQGHRVVGVFTVPDKDG-------KADPLAVAAEKDGTP 63
Query: 62 ALVPTKLGQEEYEQ------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + + A++ V+ IP +++ K G H S+LP
Sbjct: 64 VFKFPRWRVKGKPIPEVVDAYKAVGAELNVMPFCSQFIPMNVIDDPKHGSIIYHPSILPL 123
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLC 174
RGA+ I ++ GD + G + D LDTGP+ R+ + N L
Sbjct: 124 HRGASAINWTLIHGDKKAGFTVFWADDGLDTGPILLQRECAVEPNDTVDTLYNRFLFPEG 183
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
AMVEA+ + P PQ E G +Y K + S + + P
Sbjct: 184 IKAMVEAVQLIADGKAPRVPQTEEGASYEGIQKKSNAKRQRQGSLTWAEDKQQIKVPEFW 243
Query: 235 AW 236
Sbjct: 244 RM 245
Score = 39.5 bits (90), Expect = 0.66, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 256 VEGEGKPGEVINPNFTIACSQG-AVRIMRLQRAGGRVLDIG 295
+EG +PG V + + G AV + LQ G+++
Sbjct: 364 IEGASQPGAVTKNGLVLYGTDGKAVLVKNLQFEDGKMIPAS 404
>gi|307824325|ref|ZP_07654551.1| formyl transferase domain protein [Methylobacter tundripaludum
SV96]
gi|307734705|gb|EFO05556.1| formyl transferase domain protein [Methylobacter tundripaludum
SV96]
Length = 325
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 55/263 (20%), Positives = 98/263 (37%), Gaps = 6/263 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M V V ++ L+ + I V T P +V + A +
Sbjct: 1 MKTSAVVFAYHNIGVTGIECLLQAGVEIKLVITHQDDP----DENIWFGSVAELANRHRI 56
Query: 61 PALVPTKLGQEEYEQFLSFNAD-VAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P + P Q E ++ Y ++ +L G YN H SLLP++RG
Sbjct: 57 PVITPDNPNQAEVINRIADLQPQWLFSFYYRHMLSPELLAIPPRGAYNLHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AP+ A++ G+ TG+++ +M + D G + + V I N + +L+ +
Sbjct: 117 APVNWAVLHGEATTGVSLHQMVEKPDAGSLIDQQAVAILPNDTAHDVFLKLTPAAKTLLD 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLE 238
+ L N+ P +Y R+++ +SA +HN +R P+PGA+ +
Sbjct: 177 RCLPLLLTGNIEPKPLDLAQGSYFGGRKPEHGRIDWNQSAWTIHNLVRAVAPPYPGAFFD 236
Query: 239 MMIGNKHERIKLLESQLVEGEGK 261
+ GK
Sbjct: 237 SSGRRFFLLGSHYSGETAVHSGK 259
>gi|146184086|ref|XP_001027750.2| Formyl transferase family protein [Tetrahymena thermophila]
gi|146143369|gb|EAS07508.2| Formyl transferase family protein [Tetrahymena thermophila SB210]
Length = 1119
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 69/312 (22%), Positives = 125/312 (40%), Gaps = 39/312 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
+++F G+ FA L++L S S S V V T K + + V + A +
Sbjct: 762 KILFFGSDSFAYPVLKSLHSHSKSNPEFISDVQVVTH----FKTSKSKKITNQVEQYALD 817
Query: 58 FSLPALVPT----------KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYN 107
SL P + E F + + ++ +V +YG +IP I++ G
Sbjct: 818 QSLKIYQPIGQTPNNRKAEWQQFYQSELFQNNSFNLGIVCSYGYMIPSYIIDRFTEGMLV 877
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGL 166
H SLLP++RGA+P+Q A++ GD +TG++I+++ K D G + I L
Sbjct: 878 IHPSLLPKYRGASPLQYALLNGDKQTGVSIIEISKLKFDAGRILKQSLFKIPREFTYTDL 937
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
L+ + +++ + K ++ Q E T A K +T +NF +N +
Sbjct: 938 SNSLAQQSSIDIIDVLAKYKEYKQNSLEQKEEEYTKAPKFQNSDTHLNF-EIEDNQQIYN 996
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVEG----------EGKPGEV-------INPN 269
R ++ + + I + + L KPG + +
Sbjct: 997 RYRCFKGTNFVSVRTKYNSKEIIIEKMSLPNAKEQEQLKLLINSKPGSIWAFKQKSMKNY 1056
Query: 270 FTIACSQGAVRI 281
+ C +G +RI
Sbjct: 1057 VYVKCKEGFIRI 1068
>gi|169837259|ref|ZP_02870447.1| methionyl-tRNA formyltransferase [candidate division TM7
single-cell isolate TM7a]
Length = 66
Score = 66.1 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
+ GT +F++ TL+ALV + +I +V T+P G RG K AV A EF
Sbjct: 3 IRIFGTEDFSLITLKALVEAGFNIGAVVTKPDARRG-RGTKKSQPAVKIYANEF 55
>gi|3560503|gb|AAC82546.1| FxbA [Mycobacterium smegmatis str. MC2 155]
Length = 143
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
RVV G + TLQAL+ S H + V T P +V A+ + L
Sbjct: 20 RVVMFGYQTWGHRTLQALLKSRHEVCLVVTHPTSDHAY--ESIWADSVEDLARGAGIEVL 77
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+ + E E+ DV V + +P+ + + K G N H SLLP++ G +P+
Sbjct: 78 LAKRPTPELVERVRELAPDVGVANNWRTRLPRELFSIPKYGTVNLHDSLLPKFTGFSPVI 137
Query: 124 R 124
Sbjct: 138 W 138
>gi|254477588|ref|ZP_05090974.1| Luciferase-like monooxygenase family [Ruegeria sp. R11]
gi|214031831|gb|EEB72666.1| Luciferase-like monooxygenase family [Ruegeria sp. R11]
Length = 1551
Score = 66.1 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 55/316 (17%), Positives = 112/316 (35%), Gaps = 38/316 (12%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
+ +G +A +L++ H I +V ++ + + A+ LP L
Sbjct: 7 IVLGNESLLIACADSLLARGHQISAVVSR-------------DAEISAWAEGKGLPVLTD 53
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
+ + D + +A +IP +L + G N H LPR+ G A
Sbjct: 54 ARTF--------EGDVDWLLSIANLDIIPAPVLARARKGGVNFHDGPLPRYAGLNTPNWA 105
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
++ G + GI ++ +D G + R I+ + L + + E + +L
Sbjct: 106 LIEGADSYGITWHMIEGGVDEGDILAQRLFDIAEDETAYSLNAKCYAAAMDSFGEVLAQL 165
Query: 186 EQNNLPLSPQIENGITYAEKISKGE-----TRVNFCRSAENVHNHIRALSPFPGAWL-EM 239
E L PQ + + + + + ++
Sbjct: 166 ESGALDRQPQDFTTRKLYTRADRPAAGGVLDFGQPADDLLRLVRALDFNGYWNPLCTAKI 225
Query: 240 MIGNKHERIKLLE---SQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLD 293
M+ + +L + EG G GEV+ T+AC++GA+ + ++R+ G +D
Sbjct: 226 MVTGTDGQADVLSVGTASRAEGAGAAGEVLAVSQDRLTVACAEGALHLSAVKRSDGSDID 285
Query: 294 IGDFLLGCPVIIGCIV 309
+ +G I+
Sbjct: 286 LATVA-----KVGDIL 296
>gi|156059578|ref|XP_001595712.1| hypothetical protein SS1G_03801 [Sclerotinia sclerotiorum 1980]
gi|154701588|gb|EDO01327.1| hypothetical protein SS1G_03801 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 436
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 56/262 (21%), Positives = 104/262 (39%), Gaps = 6/262 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVS------SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ +F+ +L++LV+ + + V +P + GR ++ + + A
Sbjct: 43 PLRILFCGSDDFSCESLRSLVAEQQSDPKGIASIDVLIRPGKRFGRGLRETREVPLREVA 102
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+E +LP + + + ++ V V++GL +P RILN+ + G N H SLLP+
Sbjct: 103 EELNLPIHERDTFTGWDLPKPNGESINLIVAVSFGLFVPPRILNSAEYGGINVHPSLLPQ 162
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+RG+API AI+ GD TG+ + +D H ++ T Q L +
Sbjct: 163 YRGSAPIHHAIINGDTITGVTLQTLDPHKFDHGTILSQEGFPIPQPRTINYQGLLDFVTP 222
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
A + + + + +V RAL
Sbjct: 223 KAADLLAKGVRNRVFVNPESDQAIKPAPKISPVARYINWEEGLSADVERRHRALGRLWCY 282
Query: 236 WLEMMIGNKHERIKLLESQLVE 257
G +R + ++V
Sbjct: 283 TRTWWSGKNKKRTIFHDFEVVP 304
>gi|302677985|ref|XP_003028675.1| hypothetical protein SCHCODRAFT_40449 [Schizophyllum commune H4-8]
gi|300102364|gb|EFI93772.1| hypothetical protein SCHCODRAFT_40449 [Schizophyllum commune H4-8]
Length = 319
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 53/323 (16%), Positives = 109/323 (33%), Gaps = 31/323 (9%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSI---VSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
++++MG EF+ + + L + + + + T P GRRG + +S + Q +
Sbjct: 2 KILYMGRDEFSCSVFKHLHDAK-DVWQELHIATHPDEHVGRRGSQLSVSPLKTLGQSLDV 60
Query: 61 PALVPTKLGQEEYEQFLSFN--------ADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
P E ++ + ++ + + N H S
Sbjct: 61 PIYEIPHAKPEFKTWDVNAPTSQAAPSSHMLLTASFGRIIPQRMLAAFPPHNRLNVHPSP 120
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LP +RG APIQ +MAG+ ET + +++M + +D G V ++ I + + A ++ L
Sbjct: 121 LPAYRGPAPIQHMLMAGERETAVCVIEMLRKVDAGAVWGREELAIPPDADFATMRDLLGD 180
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ +V + + + Q E+ + + + +
Sbjct: 181 VGGRLLVRVLREKMRGTASSIAQAEDVSAPRAPLIQAADAMLDFARMSAEDIVRLQRAIG 240
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEGEG--------------KPGEVINPNFTIACSQGA 278
+ + + L VE E KPG + C+ G+
Sbjct: 241 HQVRHRRARDDVADEVISLHGLSVEAEAPAFLTREAGGAMLHKPGR----RILVRCAGGS 296
Query: 279 VR-IMRLQRAGGRVLDIGDFLLG 300
V + + D+ G
Sbjct: 297 VLGAREAKMQDKAQVGAVDWWNG 319
>gi|242006422|ref|XP_002424049.1| methionyl-tRNA formyltransferase, putative [Pediculus humanus
corporis]
gi|212507355|gb|EEB11311.1| methionyl-tRNA formyltransferase, putative [Pediculus humanus
corporis]
Length = 344
Score = 65.7 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 68/298 (22%), Positives = 127/298 (42%), Gaps = 36/298 (12%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSI----VSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
+VF G+ F++A L+AL+ S+ + V V T + ++K + +
Sbjct: 38 NIVFFGSDNFSIACLKALLDKSNEVMINNVEVVTSN-----------KENLLYKFSISNN 86
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ + + L+ + D+ VV ++G +IP +I++ K G N HASLLP+WRGA
Sbjct: 87 VKV--------QFWPPNLNESFDLGVVASFGKLIPAQIIHRFKYGIINVHASLLPKWRGA 138
Query: 120 APIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
PI +IM GDN TGI I K+ D G + + I L L L + +
Sbjct: 139 MPIVYSIMNGDNVTGITIQKIKPEKFDVGDIVLKKSCTIGKTELFPSLYNRLCQLGSECL 198
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR--------ALS 230
+E + K+ + Q + I+YA+K K + V + S ++ +
Sbjct: 199 IEVIQKMPECLEHCESQENDEISYAKKFGKEISVVKWSESNAVNVYNLYRALFGKYILHT 258
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEV----INPNFTIACSQGAVRIMRL 284
+ G ++++ + + +++ PG V + + C ++I +
Sbjct: 259 TWKGIKIKLLCMSLVNWDENFHCEIINKSKTPGTVMYNKTDKVLLVNCKDMPIKICTI 316
>gi|310792745|gb|EFQ28206.1| formyl transferase [Glomerella graminicola M1.001]
Length = 440
Score = 65.7 bits (158), Expect = 9e-09, Method: Composition-based stats.
Identities = 50/272 (18%), Positives = 94/272 (34%), Gaps = 20/272 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ +F+ A L AL + + V +P + +GR K + K A
Sbjct: 38 PLRILFCGSDDFSCAALDALNAEKERNPGLIESLDVVVRPGKLSGRGMKKIREVPLKKLA 97
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ LP + ++ + V V++GL +P R+LN K G N H SLLP
Sbjct: 98 EKLELPIHERDTFTGWQPRNDVN----LIVAVSFGLFVPPRLLNLAKYGGLNVHPSLLPD 153
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV--- 172
+RG AP+Q ++ TGI + + + + Q L
Sbjct: 154 FRGPAPLQHTLLQRRTHTGITLQTLHHKAFDHGTVLSQTPLPGIPVPEDCTTQRLHDIVT 213
Query: 173 -----LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR 227
+ + + + + P + + + +
Sbjct: 214 PLAAEMLVDGLRKGLHVPPLKTVGWQPNEDERKQLSHAPKVTNHDRQMNWPKWAADDVVL 273
Query: 228 ALSPFPGAWLEMMIGNKHE--RIKLLESQLVE 257
W + R+K ++++VE
Sbjct: 274 RQRVLGPVWCSAYHHGSRKIMRLKFGDAEVVE 305
>gi|330897445|gb|EGH28864.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 112
Score = 65.7 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 39/116 (33%), Gaps = 5/116 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+ + V + LQAL+ + + +V+T P K+ +V + +
Sbjct: 1 MSTKAVVFAYHDIGCVGLQALLDAGYEFAAVFTHADDPKE----KTFFGSVAQMCARHGI 56
Query: 61 PAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
E+ D Y ++ +L K N H SLLPR
Sbjct: 57 AVHAPEDPNHPLWVERIGKLAPDFIFSFYYRQLLGDSLLACAKKAALNLHGSLLPR 112
>gi|321460748|gb|EFX71787.1| hypothetical protein DAPPUDRAFT_326816 [Daphnia pulex]
Length = 924
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 78/312 (25%), Positives = 121/312 (38%), Gaps = 34/312 (10%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
V +G S FAV +A+ S+ H IV V+T P S + A + +P
Sbjct: 14 VAIIGQSLFAVEVYKAVKSNGHRIVGVFTIPD-------QGSKEDPLATTASQDGVPVFK 66
Query: 65 PTKLGQEEYE------QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
Q+ Q+ S A++ V+ IP +++ + H S+LPR RG
Sbjct: 67 FKAWRQKGQIIPEVLEQYKSVGANLNVLPFCSQFIPMEVIDYPQHKSIVYHPSVLPRHRG 126
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC-AHA 177
A I ++ GD + G++I D LDTGPV R+ + + L + A
Sbjct: 127 ANAIAWTLIEGDAKAGLSIFWADDGLDTGPVLLQRECDVLEDDTLDSLYKRFMYPEGIKA 186
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEK-ISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
V+A++ + P+ Q G TY K +V F S + +HN IR L PGAW
Sbjct: 187 TVDAVELIAMGTAPVLVQPLEGATYDPALNKKDLQQVKFTLSGQQLHNFIRGLDSSPGAW 246
Query: 237 LEMMIGNKHERIKLLESQL------------------VEGEGKPGEVINPNFTIACSQG- 277
+ + +E E +L +G K G + I G
Sbjct: 247 TCISLEEPNESTVWQEIRLYGSQLFKEASVPSGRPIYFQGNDKAGIQWDNGVLIPGQDGK 306
Query: 278 AVRIMRLQRAGG 289
V + R+ G
Sbjct: 307 WVNVQRISVEGK 318
>gi|156551495|ref|XP_001605224.1| PREDICTED: similar to CG1750-PA [Nasonia vitripennis]
Length = 322
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 87/305 (28%), Positives = 137/305 (44%), Gaps = 23/305 (7%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
RV+F+GT EFA+ +LQAL + + ++ +G +AV K A++ ++
Sbjct: 11 RVLFLGTDEFALQSLQALYHTRQK--GIVSRLEIVTAYKG---EENAVIKYAKKHNILIH 65
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
D+ VVV++G +IP +I++ LG N H SLLPRWRGAAPI
Sbjct: 66 NWPPSIS-------KDEFDIGVVVSFGHLIPSKIIDLFPLGMINVHGSLLPRWRGAAPIC 118
Query: 124 RAIMAGDNETGIAIMK-MDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ GD ETGI+IMK M K D G V KV I N L ++L++L A+ + E M
Sbjct: 119 HALINGDQETGISIMKIMPKKFDIGSVIVREKVQIHPNETYLELYKKLAILGANLLTETM 178
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
++L PQ+E +TYA KI+ + + + +++
Sbjct: 179 NQLPDILNTAKPQVETEVTYAPKITPEISFIKWNEMTAEQVYNLQRGLLGIHPLRTYFNN 238
Query: 243 NKHE---RIKLLESQLVEG--EGKPGEVINPN----FTIACSQG-AVRIMRLQRAGGRVL 292
+ + ES V E +PG I ++C + + + + G R
Sbjct: 239 QVIKLLDIKAIPESTKVNCLREKEPGLAIYDKKNKILYVSCQENSWISVGTVIIPGHRPK 298
Query: 293 DIGDF 297
DF
Sbjct: 299 SATDF 303
>gi|255938838|ref|XP_002560189.1| Pc14g01950 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584810|emb|CAP74336.1| Pc14g01950 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 396
Score = 65.3 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 6/129 (4%)
Query: 2 TLRVVFMGTSEFAVATLQAL----VSSSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ EF++A L+AL + I S V +P + GR + + A
Sbjct: 34 PLRILFCGSDEFSIAHLKALHAYHLKQPERISSIDVVCRPGKRVGRGLKQFREVPLKAAA 93
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
SLP + + ++ + V++GL +P RILN K G N H SLLP
Sbjct: 94 SALSLPIHEIDTFTGWTPPTSPNGHINLVIAVSFGLFVPPRILNGAKYGGLNVHPSLLPN 153
Query: 116 WRGAAPIQR 124
+RG AP+
Sbjct: 154 FRGPAPLHH 162
>gi|332252938|ref|XP_003275610.1| PREDICTED: 10-formyltetrahydrofolate dehydrogenase-like isoform 3
[Nomascus leucogenys]
Length = 877
Score = 64.9 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 13/130 (10%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 76 AMKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVP 128
Query: 62 ALVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ + ++ + A++ V+ IP I+NA + G H SLLPR
Sbjct: 129 VFKFSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIINAPQHGSIIYHPSLLPR 188
Query: 116 WRGAAPIQRA 125
RGA+ I
Sbjct: 189 HRGASAIHNW 198
Score = 42.6 bits (98), Expect = 0.073, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 36/125 (28%), Gaps = 3/125 (2%)
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + +PQ + I + + + A + L
Sbjct: 160 PFCSQFIPMEIINAPQHGSIIYHPSLLPRHRGASAIHNWIRGNDKVPGAWTEAGEQKLTF 219
Query: 240 MIGNKHERIKLLE--SQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQRAGGRVLDIGD 296
+ + E + + G +PG V + + + + +Q G+++ +
Sbjct: 220 FNSTLNTSGLVPEGDALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNIQLENGKMILASN 279
Query: 297 FLLGC 301
F G
Sbjct: 280 FFKGA 284
>gi|83719825|ref|YP_442712.1| formyltransferase [Burkholderia thailandensis E264]
gi|257138924|ref|ZP_05587186.1| putative formyltransferase [Burkholderia thailandensis E264]
gi|83653650|gb|ABC37713.1| ferric exochelin biosynthesis [Burkholderia thailandensis E264]
Length = 315
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 71/313 (22%), Positives = 119/313 (38%), Gaps = 22/313 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E ++
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDSPTEN----IWFGSVAAVAAEHAI 56
Query: 61 PALVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P + ++ D Y ++P +L G YN H SLLP++RG
Sbjct: 57 ACITPADPTSADVRAAVAGAKPDFIFSFYYRHMLPVDLLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQSAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ L P P + +Y + R+++ R A +V+N IRA++P +
Sbjct: 177 RVLPALLAGEAPHLPNDLSQGSYYGGRKPEDGRIDWSRPAASVYNLIRAVAP---PYPGA 233
Query: 240 MIGNKHERIKLLESQL---------VEGEGKPGEVINPNFTIA-CSQG-AVRIMRL--QR 286
R + ++L + PG ++ N C AV I+ L QR
Sbjct: 234 FTDLDGARFVIARARLAAPGSAPARAAADLPPGLHVSDNALFGVCGDSRAVSILELRRQR 293
Query: 287 AGG-RVLDIGDFL 298
GG V+ +F
Sbjct: 294 DGGETVVSPAEFA 306
>gi|227819441|ref|YP_002823412.1| methionyl-tRNA formyltransferase [Sinorhizobium fredii NGR234]
gi|227338440|gb|ACP22659.1| methionyl-tRNA formyltransferase [Sinorhizobium fredii NGR234]
Length = 303
Score = 64.9 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 68/301 (22%), Positives = 127/301 (42%), Gaps = 20/301 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+VF+G E + L+AL+ + + V T PP AGR + L V + A
Sbjct: 1 MRIVFVGAVESSRIALEALIKTGRAPALVITLPPELAGRHSDFADLEVVGRTA---GCAV 57
Query: 63 -LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E S D+ V+ + + Q + +LG H + LPR RG A
Sbjct: 58 CFTTDINHPAVLEAMASVEPDLTFVIGWSQICRQPFRDVARLGTIGFHPAALPRLRGRAV 117
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I I+ ++ TG + +D+ +D+GP+ R ++++ L + + + + EA
Sbjct: 118 IPWTIIQDEHVTGSTLFWLDEGIDSGPILLQRLFTVAADETARSLYAKHTTNLSEMVTEA 177
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+ ++ + P Q ++ +Y + + + +++ A ++ IR +P+PGA+
Sbjct: 178 VALVDTDKPPRIEQDDDQASYCARRTAEDGLIDWNAPAGSILRLIRAVGAPYPGAFSFY- 236
Query: 241 IGNKHERIKLLESQLVEGEGK----PGEV---INPNFTIACSQGAVRIMRL---QRAGGR 290
ERI++ + E G+ G+V F + C G I L +G R
Sbjct: 237 ---DGERIRIDAAVQFENAGRFIGLVGQVQCHSERGFVVLCGDGQ-CIDVLAWASPSGKR 292
Query: 291 V 291
Sbjct: 293 P 293
>gi|213620537|ref|ZP_03373320.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 143
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 5/146 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V + +QA++ + + I +++T PA + +V + A +P
Sbjct: 1 MKAVIFAYHDMGCQGVQAVLDAGYEIAAIFTHADNPAEN----TFFGSVSRLAAGLGIPV 56
Query: 63 L-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ D+ Y ++ + IL+ G +N H SLLP +RG AP
Sbjct: 57 YAPDNVNHPIWVDRIAELAPDIIFSFYYRNLLSEEILHLAPAGAFNLHGSLLPAYRGRAP 116
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTG 147
+ ++ G++ETG+ + +M K D G
Sbjct: 117 LNWVLVNGESETGVTLHRMVKRADAG 142
>gi|54298074|ref|YP_124443.1| hypothetical protein lpp2131 [Legionella pneumophila str. Paris]
gi|53751859|emb|CAH13283.1| hypothetical protein lpp2131 [Legionella pneumophila str. Paris]
Length = 1439
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/293 (16%), Positives = 102/293 (34%), Gaps = 26/293 (8%)
Query: 7 FMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
+G + + L++ H ++ + + + + K S+ L
Sbjct: 11 IIGEANITLQCADILLAGGHKLLGIIS-------------PSNTIKKWCTANSIAYLENI 57
Query: 67 KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
K ++ + D + +IPQ+IL + N H S LP++ G AI
Sbjct: 58 KEFEKNHM---DEEFDFLFSIVNSEIIPQKILRLPRYYAINYHNSPLPKYAGLYATSWAI 114
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ G+ + GI+ M++ +D G + PI+ L + ++ E +++L
Sbjct: 115 LNGETQHGISWHIMNEVIDAGDILKQPTFPINDQDTAFSLNLKCYEQGIYSFHELVEELS 174
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL------EMM 240
+ L Q + +Y +K + + G + ++M
Sbjct: 175 SHTTTLVKQNLSYRSYYGLKNKPANFGFISWEESSESIDRLCRALTFGNYTNQLEVPKIM 234
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINP---NFTIACSQGAVRIMRLQ-RAGG 289
I + +K E + KPG ++N +A + I+ L G
Sbjct: 235 INKEIYVVKSYEKLNISSGVKPGTIVNNSNGGLQVATGTTDILILELTDLEGR 287
>gi|242817134|ref|XP_002486891.1| methionyl-tRNA formyltransferase, putative [Talaromyces stipitatus
ATCC 10500]
gi|218713356|gb|EED12780.1| methionyl-tRNA formyltransferase, putative [Talaromyces stipitatus
ATCC 10500]
Length = 261
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 2 TLRVVFMGTSEFAVATLQAL----VSSSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ EF++A+L+AL + + SI S V +P + GR + + A
Sbjct: 34 PLRILFCGSDEFSIASLKALHAEQLQAPQSIKSIDVVCRPGKRVGRGLKQIREVPIKSTA 93
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
E L D+ V V++GL +P R+L A K G N H SLLP
Sbjct: 94 SELGLRIHELDTFRGWTPP---DGPIDLIVAVSFGLFVPSRLLTAAKYGGVNVHPSLLPD 150
Query: 116 WRGAAPIQR 124
RG AP+
Sbjct: 151 LRGPAPLHH 159
>gi|194377398|dbj|BAG57647.1| unnamed protein product [Homo sapiens]
Length = 801
Score = 64.5 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 13/129 (10%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLEAEKDGVPV 53
Query: 63 LVPTKLG------QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
++ + ++ + A++ V+ IP I++A + G H SLLPR
Sbjct: 54 FKYSRWRAKGQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRA 125
RGA+ I
Sbjct: 114 RGASAIHNW 122
Score = 39.1 bits (89), Expect = 0.91, Method: Composition-based stats.
Identities = 8/51 (15%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 252 ESQLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLLGC 301
++ + G +PG V + + + + +Q G+++ +F G
Sbjct: 158 DALPIPGAHRPGVVTKAGLILFGNDDKMLLVKNIQLEDGKMILASNFFKGA 208
>gi|50420935|ref|XP_459010.1| DEHA2D12408p [Debaryomyces hansenii CBS767]
gi|49654677|emb|CAG87178.1| DEHA2D12408p [Debaryomyces hansenii]
Length = 366
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 60/305 (19%), Positives = 117/305 (38%), Gaps = 23/305 (7%)
Query: 5 VVFMGTSEFAVATLQALVS----SSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
+ + G+ +F+V +L+ LV + + S V T+ +P GR V + + +
Sbjct: 30 IAYFGSDQFSVRSLKKLVEYHRKNPGKVSSIDVITRSIKPTGRNLKTFVDVPIGEYCERE 89
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
L ++A+ V+YG +IP+ LN+ K G N H SLLP++ G
Sbjct: 90 KLNIHRADSSHD-IMNILSKSQFNLAIAVSYGKLIPEGFLNSMKYGGLNVHPSLLPKYSG 148
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDT--GPVAFMRKVPISSNINTAGLQQELSVLCAH 176
++P+Q A+M D+ TG+ I + + +PI N LQ++L ++
Sbjct: 149 SSPLQYALMNDDSFTGVTIQTLHPSKFDKGDIILQSDPIPIEETDNHDSLQKKLGEYGSN 208
Query: 177 AMVEAMDKLEQNNLPLSPQIENGI----TYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
++ +D + S+ + R + +++ + L +
Sbjct: 209 LLLNVVDNRLFELPRETKNNCYAFSLASKIKPVQSEIRWDLLTSRKIKRLNDALGQLHSY 268
Query: 233 PGAWLEMMIGNKHERIKL------LESQLVEGEGKPGEVI----NPNFTIACSQGAVRIM 282
+ E K+ L + E +PGE + + GA+ I
Sbjct: 269 KYCDIRKKKKEIKENQKVIFNDIELTNDYAEELLQPGEFVLSRNKNKLIVKTIDGAISIG 328
Query: 283 RLQRA 287
+L+
Sbjct: 329 KLKFQ 333
>gi|85704421|ref|ZP_01035523.1| non-ribosomal peptide synthetase [Roseovarius sp. 217]
gi|85670829|gb|EAQ25688.1| non-ribosomal peptide synthetase [Roseovarius sp. 217]
Length = 1501
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 58/314 (18%), Positives = 110/314 (35%), Gaps = 30/314 (9%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + +G A+ A ++ H I +V T+ P V A+ L
Sbjct: 2 MQALLIGNESLALHCGAAWLARGHGIAAVVTRHPD-------------VAAWAEAKGL-- 46
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
G E+ + D + +A ++PQ +L G N H LPR+ G
Sbjct: 47 -RTVAPGPGLAERLGDLSCDWLLSIANLDLLPQTVLARATRGAVNFHDGPLPRYAGLNAP 105
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ G+ + GI ++ +D G + R V IS + L + + + +
Sbjct: 106 VWAILNGETQHGITWHLIEGGVDEGRIVAQRMVDISVDETAFTLNAKCYAAALDSFPDVI 165
Query: 183 DKLEQNNLPLSPQI---ENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
LEQ + Q + ++ + + +
Sbjct: 166 TALEQGAVTAQTQDLSARSYFARDQRPEGLCLDFSQTAESLARLVRALDHGGYANPLNRT 225
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQ-RAGGRVLDIG 295
I + + +++V G G PG V++ T+A + GA+R+ L GG
Sbjct: 226 RIIAGDRVLLVGRAEVVPGSGAPGVVLSVDATRLTVATAAGALRLSALTGPEGG----AV 281
Query: 296 DFLLGCPVIIGCIV 309
D + +G ++
Sbjct: 282 DLA---GIAVGSVL 292
>gi|52842392|ref|YP_096191.1| peptide synthetase, non-ribosomal [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629503|gb|AAU28244.1| peptide synthetase, non-ribosomal [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 1453
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/293 (16%), Positives = 101/293 (34%), Gaps = 26/293 (8%)
Query: 7 FMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPT 66
+G + + L++ H ++ + + + + K S+ L
Sbjct: 25 IIGEANITLQCADILLAGGHKLLGIIS-------------PSNTIKKWCTANSIAYLENI 71
Query: 67 KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
K ++ + D + +IPQ+IL + N H S LP++ G AI
Sbjct: 72 KEFEKNHM---DEEFDFLFSIVNSEIIPQKILRLPRYYAINYHNSPLPKYAGLYATSWAI 128
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
+ G+ + GI+ M++ +D G + PI+ L + ++ E +++L
Sbjct: 129 LNGETQHGISWHIMNEVIDAGDILKQPTFPINDLDTAFSLNLKCYEQGIYSFHELVEELS 188
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL------EMM 240
+ Q + +Y +K + + G + ++M
Sbjct: 189 SHTTTSVKQNLSCRSYYGLKNKPANFGFISWEESSESIDRLCRALTFGNYTNQLEVPKIM 248
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVINP---NFTIACSQGAVRIMRLQ-RAGG 289
I + +K E + KPG V+N +A + I+ L G
Sbjct: 249 INKEIYVVKSYEKLNISSGVKPGTVVNNSNGGLQVATGTTDILILELTDLEGR 301
>gi|33594846|ref|NP_882489.1| putative formyl transferase [Bordetella parapertussis 12822]
gi|3451487|emb|CAA07643.1| putative formyl transferase [Bordetella bronchiseptica]
gi|33564922|emb|CAE39868.1| putative formyl transferase [Bordetella parapertussis]
Length = 309
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/285 (19%), Positives = 110/285 (38%), Gaps = 12/285 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V +G E + T++ LV + H + V T P P R + S A +P
Sbjct: 1 MKFVAIGRHEILLRTIEMLVDAGHELAGVLTAAPAPEYRADVDDFRS----LAARKGVPC 56
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
V + G E A++AV + VI +++ G N H LPR+RG A
Sbjct: 57 HVSNRYGPEMVAALAGLGAEIAVSYNFPTVIGHAAIDSFPRGILNAHGGDLPRYRGNACQ 116
Query: 123 QRAIMAGDNETGIAIMKMD-KHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
A++ G+ G+ + M LD+G V + + + + Q + V A
Sbjct: 117 AWALIQGEPAIGLCVHYMVADELDSGDVIAKAMLDVDHHTTIGTVAQWMEQATPPLFVAA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+++L + + + + A + + + + +R ++ +
Sbjct: 177 LERLRHDPSYVLYRQCDDGRPALRCYPRQPSDGRIDWTKPAIDVVRHINASGHPYAGAFF 236
Query: 242 GNKHERIKLLESQLVEGE---GKPGEVI----NPNFTIACSQGAV 279
+ ++ E+Q ++G PG+V + + +AC G +
Sbjct: 237 YFESNAYRVDEAQWIDGGAYLAVPGQVAGRNPDGSVDVACGGGGL 281
>gi|104304767|gb|ABF72472.1| WbmR [Bordetella parapertussis]
Length = 309
Score = 64.1 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/285 (19%), Positives = 110/285 (38%), Gaps = 12/285 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ V +G E + T++ LV + H + V T P P R + S A +P
Sbjct: 1 MKFVAIGRHEILLRTIEMLVDAGHELAGVLTAAPAPEYRADVDDFRS----LAARKGVPC 56
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
V + G E A++AV + VI +++ G N H LPR+RG A
Sbjct: 57 HVSNRYGPEMVAALAGLGAEIAVSYNFPTVIGHAAIDSFPRGILNAHGGDLPRYRGNACQ 116
Query: 123 QRAIMAGDNETGIAIMKMD-KHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
A++ G+ G+ + M LD+G V + + + + Q + V A
Sbjct: 117 AWALIQGEPAIGLCVHYMVADELDSGDVIAKAMLDVDHHTTIGTVAQWMEQATPPLFVAA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+++L + + + + A + + + + +R ++ +
Sbjct: 177 LERLRHDPGYVLYRQCDDGRPALRCYPRQPSDGRIDWTKPAIDVVRHINASGHPYAGAFF 236
Query: 242 GNKHERIKLLESQLVEGE---GKPGEVI----NPNFTIACSQGAV 279
+ ++ E+Q ++G PG+V + + +AC G +
Sbjct: 237 YFESNAYRVDEAQWIDGGAYLAVPGQVAGRNPDGSVDVACGGGGL 281
>gi|317051337|ref|YP_004112453.1| formyl transferase domain-containing protein [Desulfurispirillum
indicum S5]
gi|316946421|gb|ADU65897.1| formyl transferase domain protein [Desulfurispirillum indicum S5]
Length = 310
Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 60/315 (19%), Positives = 113/315 (35%), Gaps = 27/315 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSA-VHKKAQEFSLP 61
+++V G SEF + L I+ + + R + S +H+ A + +
Sbjct: 1 MKIVVFGYSEFTRRCVLELQQRGMDILLLCPECDR-------ELFASYGMHEIAVQQLI- 52
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ F+ D + + ++P IL+ + G N H + LP +R A
Sbjct: 53 --FHDMDDPVLLDALRDFSPDYLFSIIFSHLVPDHILSMARHGSVNFHPAPLPAFRTANA 110
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ G + + + M D+G + +S Q++ L + +
Sbjct: 111 WFWPLRHGAESSALCLHYMTSRWDSGDLVLQVPFSLSPLETQGTYVQKVCELAPAVVQQL 170
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
M + + LP +PQ Y K++ G+ ++F A + +RA +PF A
Sbjct: 171 MALMNRGPLPRTPQ--GKGRYYGKVTLGDIFIDFNEGARGIEALVRACNPFHYAQTMFRD 228
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQGAVRIMRLQ--RAG---GRVLDI 294
N L + + G PG ++ + A + + + LQ G GR
Sbjct: 229 KNIEIVEADLTGRASD--GVPGSLLFEDGELYCAAADELLHLRILQVPMEGTFSGRR--- 283
Query: 295 GDFLLGCPVIIGCIV 309
F L V G +
Sbjct: 284 --FALQYGVNSGERL 296
>gi|133930964|ref|NP_502054.2| ALdehyde deHydrogenase family member (alh-3) [Caenorhabditis
elegans]
gi|112982606|emb|CAA92957.2| C. elegans protein F36H1.6, confirmed by transcript evidence
[Caenorhabditis elegans]
gi|112982607|emb|CAA92998.2| C. elegans protein F36H1.6, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 908
Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 70/326 (21%), Positives = 125/326 (38%), Gaps = 35/326 (10%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F V + L + H IV V+T P + GR L + +A + +P
Sbjct: 1 MKIAIIGQSAFGVDVYKELRKNGHEIVVVFTIPDKN-GREDL------LAVEAAKDGVPV 53
Query: 63 LVPTKLGQEEYEQ------------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
P++ ++ E + SF A++ V+ IP I A H
Sbjct: 54 QKPSRWRKKNPETGKFETLPEMLELYKSFGAELNVLPFCTQFIPLEITEAPAKKSIIYHP 113
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL 170
S+LP+ RGA+ I ++ GD E G++I D LDTGP+ +K + N L +
Sbjct: 114 SILPKHRGASAINWTLIEGDEEAGLSIFWADDGLDTGPILLQKKCKVEENDTLNTLYKRF 173
Query: 171 SVLCAHAMVEAMDKLE---QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR 227
A V +L + + P+ ++++ ++ +HN IR
Sbjct: 174 LYPAGVAAVAESVELIATGKAPRIVQPEEGASYEPYITTKPELAQIDWSKTQRQLHNFIR 233
Query: 228 ALSPFPGAWLEMMIGNKHER-IKLLESQLVEGEG-------KPG---EVINPNFTIACSQ 276
PGAW + KL + + + + PG V + + S
Sbjct: 234 GNDKVPGAWAVLNGEKVSFFGSKLWKPKKLPDDAVEVFVSEVPGGKVLVEDRGLLLPGSD 293
Query: 277 G-AVRIMRLQRAGGRVLDIGDFLLGC 301
G V + ++ G + + + G
Sbjct: 294 GRWVIVDTVKI-GTKTVPASKYGQGA 318
>gi|296226040|ref|XP_002758758.1| PREDICTED: 10-formyltetrahydrofolate dehydrogenase-like [Callithrix
jacchus]
Length = 801
Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 13/129 (10%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ +G S F L H +V V+T P + + +A++ +P
Sbjct: 1 MKIAVIGQSLFGQEVYCHLRKEGHEVVGVFTVPDKDG-------KADPLGLQAEKDGVPV 53
Query: 63 LVPTKLGQEEYE------QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ + ++ + A++ V+ IP I+NA + G H SLLPR
Sbjct: 54 FKFARWRAKGQVLPDVVAKYQALGAELNVLPFCSQFIPMEIINAPRHGSIIYHPSLLPRH 113
Query: 117 RGAAPIQRA 125
RGA+ I
Sbjct: 114 RGASAIHNW 122
Score = 39.5 bits (90), Expect = 0.69, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 255 LVEGEGKPGEVINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLLG 300
+ G +PG V + + + + +Q G+++ +F G
Sbjct: 161 PIPGAHRPGVVTKAGLILFGNDDRMLLVKNIQLEDGKMIPASNFFKG 207
>gi|148927028|ref|ZP_01810703.1| methionyl-tRNA formyltransferase putative [Campylobacter jejuni
subsp. jejuni CG8486]
gi|145844996|gb|EDK22094.1| methionyl-tRNA formyltransferase putative [Campylobacter jejuni
subsp. jejuni CG8486]
Length = 299
Score = 64.1 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/289 (16%), Positives = 112/289 (38%), Gaps = 22/289 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L++ + ++A L ++ + I + R K + + K A + +P
Sbjct: 2 LKIGYFADGKWARICLLKILQNPQIQINFIV--------LRKTKDIK--LEKLALRYQIP 51
Query: 62 ALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ +E+ ++ D+ V +++ + + +L N HA LP +RG
Sbjct: 52 CYTHIDINSKEFLNELKKYSNDLLVSMSFDQIFKEELLKLYPRKIINCHAGKLPFYRGRN 111
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
+ A++ + E GI++ +DK +DTG + + I + + L CA+ + E
Sbjct: 112 ILNWALINDEKEFGISVHFIDKGIDTGDIILQKTYEIKDSDDYTTLLNLCHKECANLLYE 171
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
++ ++N+ Q E G ++ E ++ + L
Sbjct: 172 SLILFLEDNVKAYKQKEGGFYCPKRKKGDEII----NWIQSTREIFNFIRALNTKDLGAS 227
Query: 241 IGNKHERIKLLESQLVEG---EGKPGEVINPN---FTIACSQGAVRIMR 283
+ IK+ +S++ + G+++ F ++ GA++I +
Sbjct: 228 AFIDEKEIKIYKSEIYKDKIFNAPIGKIVKKEKNFFIVSTKDGALKITK 276
>gi|313807693|gb|EFS46180.1| formyl transferase protein [Propionibacterium acnes HL087PA2]
gi|313818730|gb|EFS56444.1| formyl transferase protein [Propionibacterium acnes HL046PA2]
gi|313820500|gb|EFS58214.1| formyl transferase protein [Propionibacterium acnes HL036PA1]
gi|313822694|gb|EFS60408.1| formyl transferase protein [Propionibacterium acnes HL036PA2]
gi|313825372|gb|EFS63086.1| formyl transferase protein [Propionibacterium acnes HL063PA1]
gi|314925042|gb|EFS88873.1| formyl transferase protein [Propionibacterium acnes HL036PA3]
gi|314960354|gb|EFT04456.1| formyl transferase protein [Propionibacterium acnes HL002PA2]
gi|314978628|gb|EFT22722.1| formyl transferase protein [Propionibacterium acnes HL072PA2]
gi|314987948|gb|EFT32039.1| formyl transferase protein [Propionibacterium acnes HL005PA2]
gi|314989758|gb|EFT33849.1| formyl transferase protein [Propionibacterium acnes HL005PA3]
gi|315084136|gb|EFT56112.1| formyl transferase protein [Propionibacterium acnes HL027PA2]
gi|315085479|gb|EFT57455.1| formyl transferase protein [Propionibacterium acnes HL002PA3]
gi|315088464|gb|EFT60440.1| formyl transferase protein [Propionibacterium acnes HL072PA1]
gi|327331767|gb|EGE73504.1| methionyl-tRNA formyltransferase [Propionibacterium acnes HL096PA3]
gi|327443544|gb|EGE90198.1| formyl transferase protein [Propionibacterium acnes HL013PA2]
gi|328754755|gb|EGF68371.1| formyl transferase protein [Propionibacterium acnes HL020PA1]
Length = 190
Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLES 253
PQ G+T A +I + RV +A+ + N +R +SP PGAW E+ +R K+L +
Sbjct: 67 PQSVEGVTIAPQIHPDDVRVTVTAAAQEIDNLVRGVSPTPGAWAEL----DGKRFKILRT 122
Query: 254 QLVEG---------EGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+ +E +PG+++ + + ++++Q G R + D+ G
Sbjct: 123 RCLEAGDGVPSTVATAQPGQLVATRKQLFLGTGSQPLELLQVQAFGKRAMSGADWARGAD 182
Query: 303 VIIGCIV 309
+ G +
Sbjct: 183 IDAGTRL 189
>gi|313772000|gb|EFS37966.1| formyl transferase protein [Propionibacterium acnes HL074PA1]
gi|313791968|gb|EFS40069.1| formyl transferase protein [Propionibacterium acnes HL110PA1]
gi|313802082|gb|EFS43316.1| formyl transferase protein [Propionibacterium acnes HL110PA2]
gi|313810200|gb|EFS47921.1| formyl transferase protein [Propionibacterium acnes HL083PA1]
gi|313812772|gb|EFS50486.1| formyl transferase protein [Propionibacterium acnes HL025PA1]
gi|313816189|gb|EFS53903.1| formyl transferase protein [Propionibacterium acnes HL059PA1]
gi|313827668|gb|EFS65382.1| formyl transferase protein [Propionibacterium acnes HL063PA2]
gi|313830531|gb|EFS68245.1| formyl transferase protein [Propionibacterium acnes HL007PA1]
gi|313833567|gb|EFS71281.1| formyl transferase protein [Propionibacterium acnes HL056PA1]
gi|313838903|gb|EFS76617.1| formyl transferase protein [Propionibacterium acnes HL086PA1]
gi|314915271|gb|EFS79102.1| formyl transferase protein [Propionibacterium acnes HL005PA4]
gi|314918179|gb|EFS82010.1| formyl transferase protein [Propionibacterium acnes HL050PA1]
gi|314920255|gb|EFS84086.1| formyl transferase protein [Propionibacterium acnes HL050PA3]
gi|314931778|gb|EFS95609.1| formyl transferase protein [Propionibacterium acnes HL067PA1]
gi|314955580|gb|EFS99981.1| formyl transferase protein [Propionibacterium acnes HL027PA1]
gi|314958075|gb|EFT02178.1| formyl transferase protein [Propionibacterium acnes HL002PA1]
gi|314962624|gb|EFT06724.1| formyl transferase protein [Propionibacterium acnes HL082PA1]
gi|314967511|gb|EFT11610.1| formyl transferase protein [Propionibacterium acnes HL037PA1]
gi|314973531|gb|EFT17627.1| formyl transferase protein [Propionibacterium acnes HL053PA1]
gi|314976211|gb|EFT20306.1| formyl transferase protein [Propionibacterium acnes HL045PA1]
gi|314983767|gb|EFT27859.1| formyl transferase protein [Propionibacterium acnes HL005PA1]
gi|315077840|gb|EFT49891.1| formyl transferase protein [Propionibacterium acnes HL053PA2]
gi|315080465|gb|EFT52441.1| formyl transferase protein [Propionibacterium acnes HL078PA1]
gi|315096078|gb|EFT68054.1| formyl transferase protein [Propionibacterium acnes HL038PA1]
gi|315098707|gb|EFT70683.1| formyl transferase protein [Propionibacterium acnes HL059PA2]
gi|315101524|gb|EFT73500.1| formyl transferase protein [Propionibacterium acnes HL046PA1]
gi|315105751|gb|EFT77727.1| formyl transferase protein [Propionibacterium acnes HL030PA1]
gi|315108671|gb|EFT80647.1| formyl transferase protein [Propionibacterium acnes HL030PA2]
gi|327326358|gb|EGE68148.1| methionyl-tRNA formyltransferase [Propionibacterium acnes HL096PA2]
gi|327330429|gb|EGE72178.1| methionyl-tRNA formyltransferase [Propionibacterium acnes HL097PA1]
gi|327445748|gb|EGE92402.1| formyl transferase protein [Propionibacterium acnes HL043PA2]
gi|327448269|gb|EGE94923.1| formyl transferase protein [Propionibacterium acnes HL043PA1]
gi|327450609|gb|EGE97263.1| formyl transferase protein [Propionibacterium acnes HL087PA3]
gi|327453313|gb|EGE99967.1| formyl transferase protein [Propionibacterium acnes HL092PA1]
gi|327454052|gb|EGF00707.1| formyl transferase protein [Propionibacterium acnes HL083PA2]
gi|328753310|gb|EGF66926.1| formyl transferase protein [Propionibacterium acnes HL025PA2]
gi|328754027|gb|EGF67643.1| formyl transferase protein [Propionibacterium acnes HL087PA1]
gi|328760680|gb|EGF74246.1| methionyl-tRNA formyltransferase [Propionibacterium acnes HL099PA1]
Length = 190
Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLES 253
PQ G+T A +I + RV +A+ + N +R +SP PGAW E+ +R K+L +
Sbjct: 67 PQSVEGVTIAPQIHPDDVRVTVTAAAQEIDNLVRGVSPTPGAWAEL----DGKRFKILRT 122
Query: 254 QLVEG---------EGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+ +E +PG+++ + + ++++Q G R + D+ G
Sbjct: 123 RCLEAGDGVPSTVATAQPGQLVATRKQLFLGTGSQPLELLQVQAFGKRAMSGADWARGAD 182
Query: 303 VIIGCIV 309
+ G +
Sbjct: 183 IDAGTRL 189
>gi|313764282|gb|EFS35646.1| formyl transferase protein [Propionibacterium acnes HL013PA1]
Length = 190
Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLES 253
PQ G+T A +I + RV +A+ + N +R +SP PGAW E+ +R K+L +
Sbjct: 67 PQSVEGVTIAPQIHPDDVRVTVTAAAQEIDNLVRGVSPTPGAWAEL----DGKRFKILRT 122
Query: 254 QLVEG---------EGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+ +E +PG+++ + + ++++Q G R + D+ G
Sbjct: 123 RCLEAGDGVPSTVATAQPGQLVATRKQLFLGTGSQPLELLQVQAFGKRAMSGADWARGAD 182
Query: 303 VIIGCIV 309
+ G +
Sbjct: 183 IDAGTRL 189
>gi|71021521|ref|XP_760991.1| hypothetical protein UM04844.1 [Ustilago maydis 521]
gi|46101066|gb|EAK86299.1| hypothetical protein UM04844.1 [Ustilago maydis 521]
Length = 405
Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 55/346 (15%), Positives = 104/346 (30%), Gaps = 48/346 (13%)
Query: 5 VVFMGTSEFAVATLQALVSSS--HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++F GT FA L +LV++ S + V T P + +S V + A + +LP
Sbjct: 47 ILFCGTDSFASCVLSSLVANRSLCSSLHVLTPPDVEQSWGASRMKVSPVKQLALQHALPH 106
Query: 63 LVPT-----KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
++ + + + N H SLLP R
Sbjct: 107 QAVPAAGLDNYEPPQHLCTNPKAILLTCSFGHLIPDRLLDSFPDPWQRINIHPSLLPNLR 166
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
GAAPIQ A+ + +G++I ++K ++ G + + L
Sbjct: 167 GAAPIQWALARRLHTSGVSIQTLEKGRFDTGTIVNQQAFRFPPDPLHGQVESHTFLHVQR 226
Query: 178 MVEA---------MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRS---------- 218
++ + L Q E TYA K+ + + +
Sbjct: 227 VMAHRAADLLVLTLSNLPHCWQNRWIQDEAQRTYAPKLKSKHSAIQWSTWAAPDIVARER 286
Query: 219 ------------AENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKP---- 262
A G L ++R++ L+ L +P
Sbjct: 287 AFAYLYPLTTTLLPPPSWSSNANFRSVGITLFDTCTMAYDRLRHLDPTLSSVLQQPSIPE 346
Query: 263 GEVI----NPNFTIACSQG--AVRIMRLQRAGGRVLDIGDFLLGCP 302
G + + + + + +L+ AG R ++
Sbjct: 347 GSATYSLPSDALIVKTTSDTHVLAVAQLKVAGKRRKTALEWWRAYR 392
>gi|258404748|ref|YP_003197490.1| formyl transferase domain-containing protein [Desulfohalobium
retbaense DSM 5692]
gi|257796975|gb|ACV67912.1| formyl transferase domain protein [Desulfohalobium retbaense DSM
5692]
Length = 331
Score = 63.7 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 70/317 (22%), Positives = 115/317 (36%), Gaps = 30/317 (9%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M RV F+GT AV T +AL + ++V P+ AG + + + A+H+
Sbjct: 9 MP-RVAFLGTFHPAVPTFKALATKGWICIAVL---PKEAGYKNDELLE-AIHE------- 56
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
YE ++A + N H SLLPRWRG
Sbjct: 57 ------SEVPWTYEISDINEYRPNTILAANYPKIISKKYLQRYLCINTHWSLLPRWRGVH 110
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM-V 179
P AI+ GD G+ + M++ DTG V RK+ IS + + L QEL+ + A +
Sbjct: 111 PTAWAIINGDEHVGLTVHFMEEEFDTGDVLAQRKIKISKDKSINDLHQELAEVQASCVLD 170
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS-PFPGAWLE 238
D L+ Q E TY + + +N+ + + AL P
Sbjct: 171 VFNDYLKTGQWKTHSQDEAKATYVPQRKPEDGLINWEWPTSRIEGLVAALPLPKYPGAFT 230
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAG-GRVLD 293
K K ++ PG+V+ + + I + + + G +
Sbjct: 231 YFGNQKIVISKASAAECPVYYCTPGQVVRITKSGHAWIKTGDICLVVQEVLIEGERNTKN 290
Query: 294 IGDFLLGCPVIIGCIVG 310
+ L +G +G
Sbjct: 291 AAEVLR-----LGQKLG 302
>gi|314923544|gb|EFS87375.1| formyl transferase protein [Propionibacterium acnes HL001PA1]
gi|314981515|gb|EFT25609.1| formyl transferase protein [Propionibacterium acnes HL110PA3]
gi|315092179|gb|EFT64155.1| formyl transferase protein [Propionibacterium acnes HL110PA4]
gi|315103590|gb|EFT75566.1| formyl transferase protein [Propionibacterium acnes HL050PA2]
gi|327327413|gb|EGE69189.1| methionyl-tRNA formyltransferase [Propionibacterium acnes HL103PA1]
Length = 190
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLES 253
PQ G+T A +I + RV +A+ + N +R +SP PGAW E+ +R K+L +
Sbjct: 67 PQSVEGVTIAPQIHPDDVRVTVTAAAQEIDNLVRGVSPAPGAWAEL----DGKRFKILRT 122
Query: 254 QLVEG---------EGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+ +E +PG+++ + + ++++Q G R + D+ G
Sbjct: 123 RCLEAGDGVPSTVATAQPGQLVATRKQLFLGTGSQPLELLQVQAFGKRAMSGADWARGAD 182
Query: 303 VIIGCIV 309
+ G +
Sbjct: 183 IDAGTRL 189
>gi|167950834|ref|ZP_02537908.1| methionyl-tRNA formyltransferase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 61
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSA 50
L+++F GT +FA LQAL++S H +++VYTQP RPAG RG K S
Sbjct: 4 ALKIIFAGTPDFAAEALQALLASEHQVIAVYTQPDRPAG-RGRKLAASP 51
>gi|172064957|ref|YP_001815669.1| formyl transferase domain-containing protein [Burkholderia
ambifaria MC40-6]
gi|171997199|gb|ACB68116.1| formyl transferase domain protein [Burkholderia ambifaria MC40-6]
Length = 284
Score = 63.4 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/284 (14%), Positives = 87/284 (30%), Gaps = 17/284 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R F G + V A V++ V++Y+ P S + ++A++ +P
Sbjct: 1 MRFAFAGFDRWRV-VFDAFVAAGWEPVALYSIP-----VDNRLDFNSELVERAEKLRIPV 54
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + + V + + N H S LP RG P
Sbjct: 55 QLSRIDEDDLSWLAERQCDALIVAGYNRKIPAWQPYLRH---AANFHPSPLPDGRGPYPA 111
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
RAI+ G E G++ ++D DTG + P+ ++ LQ +L +
Sbjct: 112 MRAILEGRREWGVSCHRIDADFDTGEIVDSECFPLDADEWHETLQLKLQMAAHRLATRVA 171
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
++ PQ ++ +
Sbjct: 172 RDFDRLWNERRPQGAGSYWPRVADAERTIDFAQPVAEVMRVVRACGNVESIAPLF----- 226
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMR 283
++ + +PG++++ +A G V ++
Sbjct: 227 GTTVHVRRATAWHEAHTYEPGQIVHQYRRWVVVAAQDGFVALLE 270
>gi|255729372|ref|XP_002549611.1| hypothetical protein CTRG_03908 [Candida tropicalis MYA-3404]
gi|240132680|gb|EER32237.1| hypothetical protein CTRG_03908 [Candida tropicalis MYA-3404]
Length = 365
Score = 63.0 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 57/309 (18%), Positives = 117/309 (37%), Gaps = 25/309 (8%)
Query: 2 TLRVVFMGTSEFAVATLQAL--VSSSH----SIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
L++ F G+ F+VA+L L S+H + V T+ +P GR + + +A
Sbjct: 32 PLKIAFFGSDTFSVASLLKLTQYQSTHPQKIDNIHVITRSIKPTGRNLKNLIDLPIGIEA 91
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
QE ++P L E + S + ++A+ V+YG +IP +++ K G N H SLLP+
Sbjct: 92 QESNIPIL-RADTSSEILDILNSHHFNLAIAVSYGRLIPAEFISSCKYGGLNVHPSLLPK 150
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+ G++P+Q A++ D TG + + ++ +S N
Sbjct: 151 YSGSSPLQFALLNDDKFTGCTVQTLHPTKFDHGDILLQSNEVSIEDNDNISSLLNKFGQI 210
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
+ + + +P ++N ++ +++ S R
Sbjct: 211 GGDLLVDTLHQGLFVNPTP-VKNNYQFSLAPKINKSKSQALWSELTAREIKRVYDALGPI 269
Query: 236 WLEMMIGNKHERIKLLE---------SQLVEGEG------KPG--EVINPNFTIACSQGA 278
+ + + +R +E S+L+ + PG + + +G
Sbjct: 270 YTFISVNLIKKRKPFMEKQRVILSKVSELINHDDSVNTLVNPGDFTLGEKGLIVKAKEGY 329
Query: 279 VRIMRLQRA 287
V ++
Sbjct: 330 VLAESIKMQ 338
>gi|170698391|ref|ZP_02889465.1| formyl transferase domain protein [Burkholderia ambifaria IOP40-10]
gi|170136730|gb|EDT04984.1| formyl transferase domain protein [Burkholderia ambifaria IOP40-10]
Length = 284
Score = 63.0 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/284 (15%), Positives = 85/284 (29%), Gaps = 17/284 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R F G + V A V++ V++Y+ P S + ++A + +P
Sbjct: 1 MRFAFAGFDRWRV-VFDAFVAAGWEPVALYSIP-----VDNRLDFNSELVERADKLRIPV 54
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + + V + + N H S LP RG P
Sbjct: 55 QLSRMDEDDLRWLAERQCDALIVAGYSWKIPAWQPYLRH---AANFHPSPLPDGRGPYPA 111
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
RAI+ G E G++ ++D DTG + P+ ++ LQ +L +
Sbjct: 112 MRAILEGRREWGVSCHRIDADFDTGEIVDSECFPLDADEWHETLQLKLQMAAHRLATRVA 171
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
++ PQ ++ +
Sbjct: 172 RDFDRLWNERRPQGAGSYWPRLADAERTIDFAQPVAEVMRVVRACGNVESIAPLF--GTT 229
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMR 283
R + +PG++++ +A G V ++
Sbjct: 230 VHVRRATAWQ---EAHTYEPGQIVHQYRRWVVVAAQDGFVALLE 270
>gi|156102733|ref|XP_001617059.1| formyl transferase domain containing protein [Plasmodium vivax
SaI-1]
gi|148805933|gb|EDL47332.1| formyl transferase domain containing protein [Plasmodium vivax]
Length = 679
Score = 63.0 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 2 TLRVVFMGTSEFAVATLQ--ALVSS--SHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F+G++EF++ + L+ + IV V T+ PR G R LK S + ++A
Sbjct: 263 KLRILFIGSNEFSLLCFKVIMLIVKYVRNDIVLDHVITKSPRKKG-RHLKLKKSHIEEEA 321
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ ++ K+ + Y D+ + V++G + Y H SLLP
Sbjct: 322 EKKNIKIFYYDKVRNDTYLLKNK-TFDLCISVSFGEIFNASFFKNIAANVYTLHPSLLPF 380
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPV 149
+RGA+PIQR+++ ++ G +I + +D GP
Sbjct: 381 YRGASPIQRSLLNNESLFGYSIFLTNLRIDGGPP 414
Score = 38.3 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 270 FTIACSQGAV-RIMRLQRAGGRVLDIGDFLL 299
I C ++ +I +LQR +++D F
Sbjct: 640 INILCKDNSLLKIYQLQRKNKKIMDASSFFN 670
>gi|309363540|emb|CAP26375.2| CBR-ALH-3 protein [Caenorhabditis briggsae AF16]
Length = 923
Score = 63.0 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 75/336 (22%), Positives = 124/336 (36%), Gaps = 40/336 (11%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKS----------VLSAVH 52
+++ +G S F V + L + H IV V+T P + L V SAV
Sbjct: 1 MKIAIIGQSAFGVDVYKELRKNGHEIVVVFTIPDKNGREDLLGIELILLLGLLWVFSAVE 60
Query: 53 KKAQEFSLPALVPTKLGQEEYEQ------------FLSFNADVAVVVAYGLVIPQRILNA 100
A + +P P + ++ E + SF A++ V+ IP I A
Sbjct: 61 --AAKDGVPVQKPARWRKKNPETGKFETLPEMLELYKSFGAELNVLPFCTQFIPLEITEA 118
Query: 101 TKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSN 160
H S+LP+ RGA+ I ++ GD E G++I D LDTGP+ +K + N
Sbjct: 119 PPKKSIIYHPSILPKHRGASAINWTLIEGDEEAGLSIFWADDGLDTGPILLQKKCKVEEN 178
Query: 161 INTAGLQQEL-SVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSA 219
L + A+ E+++ + N P Q E G +Y I+ S
Sbjct: 179 DTLNTLYKRFLYPAGVAAVAESVELIASGNAPRIVQPEEGASYEPYITTKPELAQIDWSK 238
Query: 220 ENVHNHIRA---------LSPFPGAWLEMMIGNKHERIKLLE--SQLVEGEGKPGEVI-- 266
H S F G + + KL E ++ E G+V+
Sbjct: 239 TQRQLHNFIRGNDKVPGAWSIFNGERVSFFGSKLWKPKKLPEDAVEVAVAEVPGGKVLVE 298
Query: 267 NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLLGC 301
+ + S G V + ++ G + + + G
Sbjct: 299 DRGLLLPGSDGKWVIVDTVKI-GTKTIPASKYGQGA 333
>gi|328781279|ref|XP_001122351.2| PREDICTED: methionyl-tRNA formyltransferase, mitochondrial-like
[Apis mellifera]
Length = 285
Score = 62.6 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 67/270 (24%), Positives = 114/270 (42%), Gaps = 22/270 (8%)
Query: 45 KSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLG 104
K + V K A++ + + +VV++G +IP I+NA LG
Sbjct: 19 KIKENPVVKYAKKNKIIIHKWPVEIN-------KSEFHIGIVVSFGHLIPSTIINAFPLG 71
Query: 105 FYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMK-MDKHLDTGPVAFMRKVPISSNINT 163
N H SLLPRWRGAAPI ++ GD +TG+ IMK M K D G + +++ I +
Sbjct: 72 MLNVHGSLLPRWRGAAPIIHTLINGDLKTGVTIMKIMPKKFDIGEIVLQKQIDIDEHETM 131
Query: 164 AGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVH 223
L +L+ L + + E + L + PQ E ITYA KI+ + +N+ + +
Sbjct: 132 PKLYTKLAKLGGNLLKETFENLLELLQFAKPQDETNITYAPKITSKISLINWNKMSATNV 191
Query: 224 NH--------IRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN---FTI 272
+ + F ++++ K E + E G + + I
Sbjct: 192 YNLHRALLGLYDLTTSFQNVKIKLLDIQKIESKIIATKLKEENTGVA--IYSKKNNALII 249
Query: 273 ACSQGA-VRIMRLQRAGGRVLDIGDFLLGC 301
C + + V + ++ G + + DF G
Sbjct: 250 KCKENSFVSVKKITVQGKKTMSALDFYNGF 279
>gi|33599121|ref|NP_886681.1| putative formyl transferase [Bordetella bronchiseptica RB50]
gi|33575167|emb|CAE30630.1| putative formyl transferase [Bordetella bronchiseptica RB50]
Length = 309
Score = 62.6 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 55/291 (18%), Positives = 113/291 (38%), Gaps = 13/291 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ +G E + T+ LV + H + + T P G+ +K ++F +P
Sbjct: 1 MKFAAIGRHEALLHTIDMLVEAGHQLSYILTAKEAPEYSAGVVDFE----RKGRQFGVPV 56
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
V +L E ++ D+AV + + VI + + G N H LPR+RG A
Sbjct: 57 YVTPRLTPEWVDKMRQHAVDIAVSLNFPTVIERDAIGVFPFGILNAHGGDLPRYRGNACQ 116
Query: 123 QRAIMAGDNETGIAIMKMD-KHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
A++ + E G+ + KM LD+G V +P+ + + Q + A
Sbjct: 117 AWALINAEPEIGLCVHKMVGGELDSGDVIAKDMLPVDHHTRIRTVAQWIEEQTPKLFCAA 176
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+++L ++ + + + + + + +R ++ +
Sbjct: 177 LEQLARDPQYVLYRQTDDPRPPLRCFPRRPEDGRIDWSRTAKDVVRHINASGPPYAGAFF 236
Query: 242 GNKHERIKLLESQLVEGE---GKPGEVI----NPNFTIAC-SQGAVRIMRL 284
+ +R + E+ V G PG+V+ + + IAC G R+ +
Sbjct: 237 EYEAQRYLVYEADWVAGGEYLAIPGQVVARNQDGSIEIACGGDGYCRLSSI 287
>gi|124002179|ref|ZP_01687033.1| methionyl-tRNA formyltransferase, putative [Microscilla marina ATCC
23134]
gi|123992645|gb|EAY31990.1| methionyl-tRNA formyltransferase, putative [Microscilla marina ATCC
23134]
Length = 249
Score = 62.6 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 43/226 (19%), Positives = 83/226 (36%), Gaps = 17/226 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS----SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ 56
M +VVF+G+ L+ L+ + + I+ V T + G + AQ
Sbjct: 1 MK-KVVFLGSKPIGFFCLKCLIENQTNHNFEIIGVLTNNNKRFG------EAYDIPALAQ 53
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ ++ L N D+ + + Y ++ ++ + K N H + LP +
Sbjct: 54 QHNIQVLPSLDELLNL------PNVDIIISIQYHQILKKQHIAKAKQIAINLHMAPLPEY 107
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RG AI+ DN G I ++++ +D G + F ++ PI N L
Sbjct: 108 RGCNQFSFAIINQDNMFGTTIHQIEEGIDNGAILFEKRFPIPENCYVKTLYDLTYQHSLE 167
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENV 222
E + + Q + L+PQ T + + + +
Sbjct: 168 LFKEHIQSIIQGSYTLTPQYTLLETRKTETHYRKEINDIKKIDWEW 213
>gi|46137263|ref|XP_390323.1| hypothetical protein FG10147.1 [Gibberella zeae PH-1]
Length = 368
Score = 62.6 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 57/324 (17%), Positives = 109/324 (33%), Gaps = 40/324 (12%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQ------PPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ EF+ A+L+A+ + PP+ +GR A
Sbjct: 34 PLRILFCGSDEFSCASLKAVHEEHSKNKGLIESLEVMALPPKRSGRGFSSLKEVPCKLLA 93
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+E L + + + + + V++GL +P RIL + K G N H SLLP
Sbjct: 94 EELGLRIHQQGTFKGWDLPEGTN----LVIAVSFGLFVPPRILGSAKYGGLNVHPSLLPD 149
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKH-LDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
RG API AI+ GD+ G+++ +D D G V + P + +Q+ ++L
Sbjct: 150 LRGPAPIHHAILRGDSHVGVSLQTLDDKSFDHGTVLYQTPHPGITAPPDCTVQELTNLLA 209
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
+ L Q + + ++ ++
Sbjct: 210 PVGAQMLVQGLRDGVYVPPHQNKGWKGEELDQGQLVHAPKISKADGHIRWSSWKADDIVR 269
Query: 235 -------AWLEMMIGNKHERIKLLESQLVEGEG---KPGEVI------------------ 266
W E + + + + G G +
Sbjct: 270 AIRVLGSVWTEAVSRKGETKRLIFQDAETVSTGDVKTNGTTVRFLGHGSDSFSALVSDQG 329
Query: 267 NPNFTIAC-SQGAVRIMRLQRAGG 289
+ ++ I +R+ +++ G
Sbjct: 330 DGSYAIKTPDDKMIRVKKVKVEGK 353
>gi|114765180|ref|ZP_01444324.1| non-ribosomal peptide synthetase [Pelagibaca bermudensis HTCC2601]
gi|114542455|gb|EAU45482.1| non-ribosomal peptide synthetase [Roseovarius sp. HTCC2601]
Length = 1564
Score = 62.6 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 55/282 (19%), Positives = 102/282 (36%), Gaps = 24/282 (8%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
V +G V + L+++ H I +V T+ P + A +L + P
Sbjct: 7 VVIGNESLLVQCSEKLLAAGHPIRAVVTRNPD-------------IADWATGRALTVVAP 53
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
K E + D + +A +IP +L+ G N H LPR G A
Sbjct: 54 GKGLAERLDG---LEFDWLLSIANLDIIPAAVLSRPGKGAINFHDGPLPRHAGLNAPVWA 110
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
++ G++ G+ ++ +D G + R I+ L + + + M++L
Sbjct: 111 LIEGESRHGVTWHIIEGGVDEGDILVSRGFDIAPTDTALTLNTKAYEAAIDSFGDLMEQL 170
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKH 245
E PQ + +Y + + + G + + K
Sbjct: 171 EHGLR-RFPQDLSLRSYHALADRPSAHGLLDFTRPATELARLVRALDHGGYANPLSAPKF 229
Query: 246 E----RIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVR 280
+ E++ V+G G PG V+ + + T+AC GA+R
Sbjct: 230 RAHGAFWLVGEARAVDGSGAPGAVLEATDDHLTVACGSGALR 271
>gi|326926851|ref|XP_003209610.1| PREDICTED: methionyl-tRNA formyltransferase, mitochondrial-like
[Meleagris gallopavo]
Length = 570
Score = 62.6 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 23/266 (8%)
Query: 50 AVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGH 109
V A+E LP + G + DV VV ++G ++ + ++ G N H
Sbjct: 272 PVKSCARELQLPVHEWPQTGP-------AGQFDVGVVASFGRLLSENLILQFPYGVLNVH 324
Query: 110 ASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQ 168
S LPRWRG+API ++ GD TG+ +M++ D GP+ + P+ T L+
Sbjct: 325 PSCLPRWRGSAPIVHTVLHGDKVTGVTVMEIRPKRFDVGPIIKQEECPVPPQCTTKELEV 384
Query: 169 ELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRS----AENVHN 224
L+ + A ++ + L ++ Q + G+T+A KIS ++ +N+ +H
Sbjct: 385 ILAEMGAKMLLSVLKNLPESLENKKEQPKEGVTFAPKISVAKSCINWEEQTAAQIIQLHR 444
Query: 225 HIRALSPFPGAW--LEMMIGNKHERIKLLESQ---LVEGEGKPGEVINPNF---TIA-CS 275
I ++ P W + + + E +L S L + PG ++ IA C
Sbjct: 445 AIGSMFPLQTLWKGSTVKLLDFVEVDNILGSADQVLSDHGAVPGSLLYHKMSQTLIARCK 504
Query: 276 QGAVRIMRLQRAGGRVLDIGDFLLGC 301
+G V I + + L DF G
Sbjct: 505 EGWVGIKTVVL--KKKLTAVDFYNGY 528
>gi|222098559|ref|YP_002532617.1| methionyl-tRNA formyltransferase [Bacillus cereus Q1]
gi|221242618|gb|ACM15328.1| methionyl-tRNA formyltransferase [Bacillus cereus Q1]
Length = 313
Score = 62.6 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 55/291 (18%), Positives = 119/291 (40%), Gaps = 14/291 (4%)
Query: 4 RVVFMG--TSEFAVATLQALVSSS-HSIVSVYTQPP-RPAGRRGLKSVLSAVHKKAQEFS 59
+VV S+F + LQ L+ S+ ++ T P + + + K+A++
Sbjct: 7 KVVLFSEVNSKFGLPFLQELIQEPSISVEALVTSPEGKLCSYYIGEPDQVDLEKEAKDIG 66
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P KL + L D ++ Y ++ + IL+ K N H S LPR+ G
Sbjct: 67 IPVLRPDKLNDSNTIELLKNYNADYFIIANYQKILKEDILSIPKEDTINFHPSPLPRYAG 126
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP G+ E G++ +++ +D GP+ V +S + +++ +
Sbjct: 127 LAPFFWMAKNGEKEGGVSCIQVVPEIDAGPILAQMPVVMSGTETSLEIREIHFKQSIILL 186
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + K++ + Q+ + TY + + + +N+ E++ IRA P
Sbjct: 187 KQVLQKIKNKDFTSKLQLLSDRTYYSQPKEEDYFINWELDTESILRTIRAGYPQGA---- 242
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEV-----INPNFTIACSQGAVRIMRL 284
+E+I++L ++ + + + N ++ G + + +
Sbjct: 243 FAFNQYNEKIRILHAERTDYPQQIQSIGIFREHNDKILVSTKDGWLHLQTI 293
>gi|115360634|ref|YP_777771.1| formyl transferase domain-containing protein [Burkholderia
ambifaria AMMD]
gi|115285962|gb|ABI91437.1| formyl transferase domain protein [Burkholderia ambifaria AMMD]
Length = 284
Score = 62.2 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 43/284 (15%), Positives = 85/284 (29%), Gaps = 17/284 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R F G + V A V++ V++Y+ P S + ++A + +P
Sbjct: 1 MRFAFAGFDRWRV-VFDAFVAAGWEPVALYSIP-----VDNRLDFNSELVERADKLRIPV 54
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + + V + + N H S LP RG P
Sbjct: 55 QLSRIDEDDLRWLAERQCDALIVAGYNRKIPAWQPYLRH---AANFHPSPLPDGRGPYPA 111
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
RAI+ G E G++ ++D DTG + P+ ++ LQ +L +
Sbjct: 112 MRAILEGRREWGVSCHQIDADFDTGEIVDSECFPLDTDEWHETLQLKLQMAAHRLATRVA 171
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
++ PQ ++ +
Sbjct: 172 RDFDRLWNERRPQGAGSYWPRLADAERTIDFAQPVAEVMRVVRACGNVESIAPLF--GTT 229
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRIMR 283
R + +PG++++ +A G V ++
Sbjct: 230 VHVRRATAWQ---EAHTYEPGQIVHQYRRWVVVAAQDGFVALLE 270
>gi|149201049|ref|ZP_01878024.1| non-ribosomal peptide synthetase [Roseovarius sp. TM1035]
gi|149145382|gb|EDM33408.1| non-ribosomal peptide synthetase [Roseovarius sp. TM1035]
Length = 1503
Score = 62.2 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 55/314 (17%), Positives = 108/314 (34%), Gaps = 30/314 (9%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + +G A+ A ++ H I +V T+ + V A+ L
Sbjct: 2 MQALLIGNESLALHCGTAWLARGHGIAAVITR-------------HADVAAWAEAKGL-- 46
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
G E+ D + +A ++PQ +L G N H LPR+ G
Sbjct: 47 -RIVPPGPGLAERLGDLRCDWLLSIANLDLLPQTVLARATGGAVNFHDGPLPRYAGLNAP 105
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ + + GI ++ +D G + R V I+ + L + + + +
Sbjct: 106 VWAILNAEAQHGITWHLIEGGVDEGRILTQRMVDIAGDETAFTLNAKCYAAALDSFADVI 165
Query: 183 DKLEQNNLPLSPQI---ENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
LEQ + Q + ++ + + +
Sbjct: 166 TALEQGAVTAQTQDLSARSYFARDQRPEGLCLDFTQPAESLARLVRALDHGGYANPLNKT 225
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQ-RAGGRVLDIG 295
I + + +++V G G PG V++ T+A + GA+R+ L GG
Sbjct: 226 RIIAGDRVLLVGRAEVVPGSGTPGLVLSVEATRLTVATASGALRLSALTGPEGG----AV 281
Query: 296 DFLLGCPVIIGCIV 309
D + +G ++
Sbjct: 282 DL---TEIAVGSVL 292
>gi|297183537|gb|ADI19666.1| methionyl-tRNA formyltransferase [uncultured Alteromonadales
bacterium HF4000_16C08]
Length = 246
Score = 62.2 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 87/239 (36%), Positives = 135/239 (56%), Gaps = 13/239 (5%)
Query: 54 KAQEFSLPALVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
A +P P L + + + NAD+ VVVAYGL++P +L A KLG N H S+
Sbjct: 1 MALSHEIPVYQPASLKSSDAQAELQALNADIMVVVAYGLILPVAVLEAPKLGCLNVHGSI 60
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
LP+WRGAAPIQRA+ AGD+ETG+ IM+MD+ LDTG + + ++PI++ +A L ++L+
Sbjct: 61 LPKWRGAAPIQRAVWAGDDETGVTIMQMDEGLDTGDMLHIARIPIANTDTSASLYEKLAD 120
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
L A++ +D L SPQ + TYA+K+SK E +++ A+ + +IRA +P+
Sbjct: 121 LGPTALLHTLDNLASL--TPSPQDDADATYAKKLSKEEAFIDWRDDAQQIERNIRAFNPW 178
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEGEGK---PGEVI---NPNFTIACSQGAVRIMRLQ 285
P AW + N IK+ + +++ PG + +A +G RI LQ
Sbjct: 179 PVAWTTIADQN----IKIWAADVIDDLATGNAPGTITQADKHGIVVATGRGGSRIHSLQ 233
>gi|217962590|ref|YP_002341162.1| methionyl-tRNA formyltransferase [Bacillus cereus AH187]
gi|217066253|gb|ACJ80503.1| methionyl-tRNA formyltransferase [Bacillus cereus AH187]
Length = 313
Score = 62.2 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 54/291 (18%), Positives = 119/291 (40%), Gaps = 14/291 (4%)
Query: 4 RVVFMG--TSEFAVATLQALVSSS-HSIVSVYTQPP-RPAGRRGLKSVLSAVHKKAQEFS 59
+VV S+F + L+ L+ S+ ++ T P + + + K+A++
Sbjct: 7 KVVLFSEVNSKFGLPFLEELIQEPSISVEALVTSPEGKLCSYYIGEPDQVDLEKEAKDIG 66
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P KL + L D ++ Y ++ + IL+ K N H S LPR+ G
Sbjct: 67 IPVLRPDKLNDSNTIELLKNYNADYFIIANYQKILKEDILSIPKEDTINFHPSPLPRYAG 126
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP G+ E G++ +++ +D GP+ V +S + +++ +
Sbjct: 127 LAPFFWMAKNGEKEGGVSCIQVVPEIDAGPILAQMPVVMSGTETSLEIREIHFKQSIILL 186
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + K++ + Q+ + TY + + + +N+ E++ IRA P
Sbjct: 187 KQVLQKIKNKDFTSKLQLLSDRTYYSQPKEEDYFINWELDTESILRTIRAGYPQGA---- 242
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEV-----INPNFTIACSQGAVRIMRL 284
+E+I++L ++ + + + N ++ G + + +
Sbjct: 243 FAFNQYNEKIRILHAERTDYPQQIQSIGIFREHNDKILVSTKDGWLHLQTI 293
>gi|303279520|ref|XP_003059053.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460213|gb|EEH57508.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 199
Score = 62.2 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Query: 263 GEVI--NPNFTIAC-SQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
G V+ + C G + I LQ G + + D++ G
Sbjct: 145 GTVVIRKDCMRVPCAGGGWLEITELQPPGKKAMSARDYVNGLK 187
>gi|254465969|ref|ZP_05079380.1| Luciferase-like monooxygenase family [Rhodobacterales bacterium
Y4I]
gi|206686877|gb|EDZ47359.1| Luciferase-like monooxygenase family [Rhodobacterales bacterium
Y4I]
Length = 1521
Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/296 (18%), Positives = 97/296 (32%), Gaps = 28/296 (9%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
+G + AL++ H I +V +Q AG R A + L L
Sbjct: 7 ALIGNESLLIGCADALLARGHQIRAVVSQ---DAGIR----------DWAADKELTLLEK 53
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
D + VA VIP +L G N H LP + G A
Sbjct: 54 PADLT--------GGFDWLLSVANLTVIPDAVLALAAKGAVNFHDGPLPLYAGLNTPNWA 105
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
++ G+ + GI ++ +D G + R ++++ L + + E + +L
Sbjct: 106 LINGEPQHGITWHLIEGGVDEGDILAQRLFDVAADETAFSLNSKCYAAAMDSFGEVVTQL 165
Query: 186 EQNNLPLSPQIENGITYAEKISKG----ETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
E L Q + +K + + + +
Sbjct: 166 ETGELKRQKQDLSQRRLFKKSDRPAAGGMLDFTRPAAELARLVRALDTGGYWNPMCAAKL 225
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDI 294
+ ++ +G G PG V+ + TIA GA+ + RL G+ LDI
Sbjct: 226 RIGGAIMLAGGAESADGSGAPGTVLEARKTSVTIATGDGALTLSRLTTPAGQPLDI 281
>gi|242766660|ref|XP_002341215.1| methionyl-tRNA formyltransferase family protein, putative
[Talaromyces stipitatus ATCC 10500]
gi|218724411|gb|EED23828.1| methionyl-tRNA formyltransferase family protein, putative
[Talaromyces stipitatus ATCC 10500]
Length = 399
Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 61/336 (18%), Positives = 116/336 (34%), Gaps = 51/336 (15%)
Query: 2 TLRVVFMGTSEFAVATLQAL----VSSSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ EF+VA+L+AL + S I S V +P + GR + + A
Sbjct: 34 PLRILFCGSDEFSVASLEALRAEQLRSPQLIKSIDVVCRPGKRVGRGLKQIREVPIKTTA 93
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ L D+ + V++GL +P R+L A K G N H SLLP
Sbjct: 94 SKLDLRIHELDTFKGWTP----DGPIDLIIAVSFGLFVPSRLLTAAKYGGVNVHPSLLPD 149
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL----- 170
RG API +++G TGI + + + + +
Sbjct: 150 LRGPAPIHHTLLSGRRTTGITLQTLHHKHFDHGIILDQTPAPGIPVPNLEYCTVPELLGF 209
Query: 171 -------SVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAEN-- 221
++ + L++ N ++ +A K++ + + +
Sbjct: 210 LAPKGAEMLINGIRNRVFVPPLKEVNSQVNKLNSKSPIHAAKVTPEDRHIKWKEWTWTDI 269
Query: 222 -------VHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGE---------- 264
+AL P + + +R+ E + + + P
Sbjct: 270 NRRQRVLSSLWNKALIPAQKPSADDPKNFQWKRVIFDEIEGISQDSVPKSQWLSLLPGVP 329
Query: 265 VI---------NPNFTIACSQG-AVRIMRLQRAGGR 290
I + + + G +R+ +L+ GG+
Sbjct: 330 FIPKPTESNSRDSALYVYTADGKLLRLNKLKVEGGK 365
>gi|30020756|ref|NP_832387.1| methionyl-tRNA formyltransferase [Bacillus cereus ATCC 14579]
gi|29896308|gb|AAP09588.1| Methionyl-tRNA formyltransferase [Bacillus cereus ATCC 14579]
Length = 316
Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 55/291 (18%), Positives = 120/291 (41%), Gaps = 14/291 (4%)
Query: 4 RVVFMG--TSEFAVATLQALVSSS-HSIVSVYTQPP-RPAGRRGLKSVLSAVHKKAQEFS 59
+V+ S+F + LQ L+ S+ ++ T P + + + K+A++
Sbjct: 7 KVILFSEVNSKFGLPFLQELIQEPSISVEALVTSPEGKLCSYYIGEPDQVDLEKEAKDIG 66
Query: 60 LPA-LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P E ++NAD ++ Y ++ + IL+ K N H S LPR+ G
Sbjct: 67 IPVLRPDKLNYSNTIELLKNYNADYFIIANYQKILKEDILSIPKEDTINFHPSPLPRYAG 126
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP G+ E G++ +++ +D GP+ V +S +++ +
Sbjct: 127 LAPFFWMAKNGEKEGGVSCIQVVPEIDAGPILAQLPVVMSGTETALEIRETHFKQSIILL 186
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + K++ N+ Q+ + TY + + + VN+ + E++ IRA P
Sbjct: 187 KQVLQKIKNNDFTSKLQLLSNRTYYSQPKEEDYFVNWEQDIESILRTIRAGYPQGA---- 242
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEV-----INPNFTIACSQGAVRIMRL 284
+ + +E+I++L ++ E + N ++ G + + +
Sbjct: 243 LAFNHYNEKIRILSAERTEYPQPIQSIGVFREHNNKILVSTKDGWLHLQMI 293
>gi|156343044|ref|XP_001621020.1| hypothetical protein NEMVEDRAFT_v1g222453 [Nematostella vectensis]
gi|156206580|gb|EDO28920.1| predicted protein [Nematostella vectensis]
Length = 229
Score = 62.2 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 8/207 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-----HSIVSVYTQPPRPAGRRGLKSVLSAV--HKKAQ 56
RV+F GT +FAV LQ L+ V + P R + + + A
Sbjct: 19 RVLFFGTDKFAVHPLQNLLERMQDGSLIENVELVCPPERRRAINKKVQNENFITAREYAI 78
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
E +P E D+ VV ++G +IP +++ G N H S+LP+W
Sbjct: 79 EEGIPIHEWKGKEGWAPEYSPGGPYDIGVVASFGYLIPNNVIDLCPSGMVNIHPSILPKW 138
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
RGAAP+ AI++G + TG++I+ + + D G + I +I L EL++L +
Sbjct: 139 RGAAPMTHAILSGASHTGVSIVGVSRDRFDHGKILLQENYKIRDDIMYDDLSDELAILGS 198
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITY 202
+ +N P + Y
Sbjct: 199 RMHMPRYPLPPRNYNPSKRPPPLHMYY 225
>gi|207108896|ref|ZP_03243058.1| hypothetical protein HpylH_05834 [Helicobacter pylori
HPKX_438_CA4C1]
Length = 269
Score = 61.8 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS---SHSIVSVYTQPPRPAGRRGLKSVL 48
+R+VFMGT FA L+ LV + +V ++TQ +P G R +
Sbjct: 218 KMRIVFMGTPGFAEVILRVLVENEDKKIEVVGLFTQMDKPFG-RKKELKP 266
>gi|126739611|ref|ZP_01755303.1| non-ribosomal peptide synthetase [Roseobacter sp. SK209-2-6]
gi|126719257|gb|EBA15967.1| non-ribosomal peptide synthetase [Roseobacter sp. SK209-2-6]
Length = 1527
Score = 61.8 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 55/284 (19%), Positives = 101/284 (35%), Gaps = 30/284 (10%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
V +G + +AL+S H I +V TQ + A + LP L
Sbjct: 7 VVIGDESLLIGCSEALLSGGHHIKAVVTQ-------------DQDITSWAADKGLPVLAY 53
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
K + D + +A +IPQ +L+ G N H LP + G A
Sbjct: 54 PKDI--------NEEFDWLLSIANLRMIPQGVLDKATKGAVNFHDGPLPNYAGLNTPVWA 105
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
++AG+ + GI M+ +D G + R I ++ L + + E + +L
Sbjct: 106 MIAGEAQHGITWHVMEGGVDEGDILAQRLFDIGADETALSLNSKCYAAAMDSFPEVLAQL 165
Query: 186 EQNNLPLSPQIENGITYAEKISKGE-----TRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
E +L Q + +Y K + + + + W
Sbjct: 166 ESGSLQRRAQDLSQRSYFAKDQRPSGGAVLDFSKPAEELARLVQALDFGGYWNPLWAP-K 224
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRI 281
I + + ++Q+V+G G G +++ +A QG + +
Sbjct: 225 IMTATRSLLVSKAQVVDGIGAAGTILSVTGAELRVATGQGTLAL 268
>gi|157149393|ref|YP_001451410.1| hypothetical protein EcE24377A_F0041 [Escherichia coli E24377A]
gi|194430353|ref|ZP_03062842.1| hypothetical protein EcB171_0135 [Escherichia coli B171]
gi|194439846|ref|ZP_03071911.1| hypothetical protein EC1011_2670 [Escherichia coli 101-1]
gi|157076560|gb|ABV16273.1| hypothetical protein EcE24377A_F0041 [Escherichia coli E24377A]
gi|194411602|gb|EDX27935.1| hypothetical protein EcB171_0135 [Escherichia coli B171]
gi|194421236|gb|EDX37258.1| hypothetical protein EC1011_2670 [Escherichia coli 101-1]
Length = 38
Score = 61.8 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVY 32
+LR++F GT +FA L AL+SS H++V V+
Sbjct: 4 SLRIIFAGTPDFAARHLDALLSSGHNVVGVF 34
>gi|238796335|ref|ZP_04639844.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia mollaretii ATCC 43969]
gi|238719780|gb|EEQ11587.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia mollaretii ATCC 43969]
Length = 623
Score = 61.8 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 9/239 (3%)
Query: 52 HKKAQEFSLPAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
+ A + LP E+ D+ Y ++ IL++ G +N H
Sbjct: 2 ARVAADLDLPVFAPEEVNHPLWIERIQQLQPDIIFSFYYRNMLCDDILSSAPRGAFNLHG 61
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL 170
SLLP++RG API A++ G+ ETG+ + +M K D GP+ KV IS L ++
Sbjct: 62 SLLPKYRGRAPINWALVNGETETGVTLHQMVKKADAGPIVGQHKVTISDTDTALTLHGKM 121
Query: 171 SVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-AL 229
+ + + K++ L L+PQ E +Y + + + +++ SA ++N +R
Sbjct: 122 HEASRELLRDLLPKMKGAPLHLTPQNEAEASYFGRRTAADGEIHWHNSASTINNLVRAVT 181
Query: 230 SPFPGAWLEMMIGNKHERIKLLESQLVEG-EGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
P+PGA+ + ++ + S+ + GK PG V++ + +AC +GA+ I+ Q
Sbjct: 182 EPYPGAFSYLG----QRKLIIWRSRPLNVVHGKLPGTVLSTSPLVVACGEGALEIITGQ 236
>gi|238782547|ref|ZP_04626578.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia bercovieri ATCC 43970]
gi|238716474|gb|EEQ08455.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia bercovieri ATCC 43970]
Length = 623
Score = 61.4 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 62/239 (25%), Positives = 118/239 (49%), Gaps = 9/239 (3%)
Query: 52 HKKAQEFSLPAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
+ A + LP E+ D+ Y ++ IL+ G +N H
Sbjct: 2 ARVAADLDLPVFAPEDVNHPLWIERIQQLQPDIIFSFYYRNMLCDDILSLAPRGAFNLHG 61
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL 170
SLLP++RG API A++ G++ETG+ + +M K D GP+ KV IS L ++
Sbjct: 62 SLLPKYRGRAPINWALVKGESETGVTLHQMVKKADAGPIVGQYKVAISDADTALTLHGKM 121
Query: 171 SVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-AL 229
+ + + + K+++ LPL+PQ E +Y + + + +++ +SA ++N +R
Sbjct: 122 RDASQNLLGDLLPKMKEAPLPLTPQNEAEASYFGRRTAADGEIHWHQSASAINNLVRAVT 181
Query: 230 SPFPGAWLEMMIGNKHERIKLLESQLVE-GEGK-PGEVINPN-FTIACSQGAVRIMRLQ 285
P+PGA+ + ++ + ++ ++ GK PG V++ + +AC +GA+ I+ Q
Sbjct: 182 EPYPGAFSYLG----QRKLIIWRARPLDMAHGKLPGTVLSTSPLIVACGEGALEIVTGQ 236
>gi|124004196|ref|ZP_01689042.1| bifunctional polymyxin resistance ArnA protein [Microscilla marina
ATCC 23134]
gi|123990266|gb|EAY29765.1| bifunctional polymyxin resistance ArnA protein [Microscilla marina
ATCC 23134]
Length = 260
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/264 (21%), Positives = 132/264 (50%), Gaps = 14/264 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQP----PRPAGRRGLKSVLSAVHKKAQEF 58
++++F+G ++F+ L+ ++ I +V+T P + + + + + AQE
Sbjct: 1 MKIIFLGATQFSQEIFLHLLENNIKIHTVFTIPQEFKISYSSSKVKNYNYANLQEIAQEH 60
Query: 59 SLPAL----VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
++ + + Y+ D+ +V+ + ++P++I N K G + HAS+LP
Sbjct: 61 NVNTIEIESTKDNRISDHYDYIKEMEPDLILVMGWYYMVPEKIRNLAKYGTWGIHASMLP 120
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
+ G AP+ AI+ G+ ETG+++ K+D +D G + + I+ + + ++
Sbjct: 121 DYAGGAPLVWAIINGEEETGVSLFKLDNGVDDGDLIRQKSFIITFEDTIKEVYAKATIAS 180
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFP 233
+++A+ ++ ++ PQ ++ I + S + ++F + A ++N IRA SP+P
Sbjct: 181 KEILLDALQNIQ--DIQFIPQDKSKIQVFPQRSPKDGEIDFQKPAYEIYNFIRAQSSPYP 238
Query: 234 GAWLEMMIGNKHERIKLLESQLVE 257
GA+ + + ++I + +++ E
Sbjct: 239 GAFFKTID---GKKIIIESARIEE 259
>gi|315092888|gb|EFT64864.1| formyl transferase protein [Propionibacterium acnes HL060PA1]
Length = 190
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLES 253
PQ G+T A +I + RV +A+ + N +R +SP PGAW E+ +R K+L +
Sbjct: 67 PQSVEGVTIAPQIHPDDVRVTVTAAAQEIDNLVRGVSPAPGAWAEL----DGKRFKILRT 122
Query: 254 QLVEG---------EGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+ +E +PG+++ + + ++++Q G R + D+ G
Sbjct: 123 RCLEAGDGVPSTVATAQPGQLVATRKQLFLGTGSQPLELLQVQAFGKRAMRGADWARGAD 182
Query: 303 VIIGCIV 309
+ G +
Sbjct: 183 IDAGTRL 189
>gi|222824231|ref|YP_002575805.1| formyltransferase [Campylobacter lari RM2100]
gi|222539453|gb|ACM64554.1| conserved hypothetical protein, putative formyltransferase
[Campylobacter lari RM2100]
Length = 297
Score = 61.4 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/293 (16%), Positives = 112/293 (38%), Gaps = 21/293 (7%)
Query: 3 LRVVFMGTSEFAVATLQALV-SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ + F+G +F+ L L+ +S+ IV + T S S ++ ++P
Sbjct: 1 MNIFFIGCVDFSAKILSELLKNSNVKIVGLATMRES--------SFNSDFFDISRIGNIP 52
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ + + +F+ + + ++ L H + LP+ RG P
Sbjct: 53 FIYTNDINNKSSIEFIKNCNPDIIYCFGWSKLIKKEL-LNLYPIIGFHPAKLPKNRGRNP 111
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV-- 179
I A+ ++T MD+ +D+G + ++V IS N + L ++ + +
Sbjct: 112 ITWALFLNLSKTASTFFIMDEDMDSGRILSQKEVKISKNDDAQSLYDKIVKIAIKQVEDF 171
Query: 180 -----EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFP 233
+ D + Q + K S + ++F ++E ++N +R P+
Sbjct: 172 TTKIACSHDHISYLKTHSYEQNLSLSNIWRKRSASDGIIDFRMNSEAIYNLVRALSKPYC 231
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMR 283
GA ++ +E+ + + G+++ + + GA+ +++
Sbjct: 232 GADVKYKNIYYKIWKTKIENNIFCNNIECGKILNIKDKKILVKTYNGAIWLVK 284
>gi|326435186|gb|EGD80756.1| hypothetical protein PTSG_01345 [Salpingoeca sp. ATCC 50818]
Length = 371
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 64/351 (18%), Positives = 109/351 (31%), Gaps = 60/351 (17%)
Query: 3 LRVVFMGTSEFAVATLQALVS-----------SSHSIVSVYTQPPR------PAGRRGLK 45
LRV+F GT FA+ TL+ LV + PPR + +
Sbjct: 8 LRVLFFGTDSFALPTLRTLVEDLGSVHTTRIIDHVQVAC----PPRGRPTTLSSSSPSKR 63
Query: 46 SVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLS--FNADVAVVVAYGLVIPQRILNATKL 103
V + + + S DV VV ++G +IP +L+ +L
Sbjct: 64 DDSHVVRDFCEANHIFVHDCPPRDNDWEGFVASLAPQFDVGVVASFGHIIPDVMLDHFRL 123
Query: 104 GFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHL-DTGPVAFMRKVPISSNIN 162
G N H SLLP++RGAAP+ I+ GD+ G++I+++ K D G V +
Sbjct: 124 GALNVHPSLLPKYRGAAPLHHTILNGDSTAGVSIIEVSKRTVDVGRVLLQESFSVDQRWY 183
Query: 163 TAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENV 222
L+ + L A M+ + L PQ + + + + +
Sbjct: 184 LEDLRDHAAELGAQMMLRVLGDLSSYQDNARPQQDLPYPSSYAGKRFKKHTVVDWGSMTR 243
Query: 223 HNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEV----------------- 265
+ + L + + + + P V
Sbjct: 244 AAVVNMHRCYANN-LGLHSTVAGRPVTIAKLADTAEAAPPIHVPSPSPSSSSPSSSSSSS 302
Query: 266 --------INPN----------FTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ + C G V I +Q R + I
Sbjct: 303 SEASERADVAAGVGVPSPGAKLLHVRCKDGFVPITHVQFPTRRPITIKQLY 353
>gi|52141724|ref|YP_085105.1| methionyl-tRNA formyltransferase [Bacillus cereus E33L]
gi|51975193|gb|AAU16743.1| methionyl-tRNA formyltransferase [Bacillus cereus E33L]
Length = 316
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/291 (19%), Positives = 120/291 (41%), Gaps = 14/291 (4%)
Query: 4 RVVFMG--TSEFAVATLQALVSSS-HSIVSVYTQPP-RPAGRRGLKSVLSAVHKKAQEFS 59
+V+ S+F + LQ L+ S+ ++ T P + + + K+A++
Sbjct: 7 KVILFSEVNSKFGLPFLQELIQEPSISVEALVTSPEGKLCSYYIGEPDQVDLEKEAKDIG 66
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P KL + L D ++ Y ++ + IL+ K N H S LPR+ G
Sbjct: 67 IPVLRPDKLNDSNTVELLKNYNADYFIIANYQKILKEDILSIPKEDTINFHPSPLPRYAG 126
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP G+ E G++ +++ +D GP+ V +S +++ +
Sbjct: 127 LAPFFWMAKNGEKEGGVSCIQVVPEIDAGPILAQLPVVMSGTETALEIRETHFKQSIILL 186
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + K++ N+ Q+ + TY + + + VN+ + E++ IRA P
Sbjct: 187 KQVLQKIKNNDFTSKLQLLSNRTYYSQPKEEDYFVNWEQDIESILRTIRAGYPQGA---- 242
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEV-----INPNFTIACSQGAVRIMRL 284
+E+I++L ++ E + + N ++ G + + +
Sbjct: 243 FAFNQYNEKIRILSAERTEYPQQIQSIGVFREHNNKILVSTKDGWLHLQMI 293
>gi|291534865|emb|CBL07977.1| Methionyl-tRNA formyltransferase [Roseburia intestinalis M50/1]
Length = 295
Score = 61.1 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/290 (19%), Positives = 109/290 (37%), Gaps = 24/290 (8%)
Query: 3 LRVVFMGTSEFAVATLQAL-VSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+R++ +GT + A+ L + + V +K ++A +++ E +
Sbjct: 1 MRIILLGTGDIALKVFLKLKNDNRIEMKGVIC-------DDSVKEEVNAEYQRQIEEN-- 51
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
G + D V K F N HA +LP++RG +
Sbjct: 52 -------GGKILSFEEESIKDADAVFTCEYRKAIPQKYVDKYMFLNCHAGILPKYRGFSA 104
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
AIM G+ + G I +MD+ LD G + ++ K PIS A L + +
Sbjct: 105 NPWAIMNGEQQIGYTIHRMDEKLDNGDIYYVGKFPISYQQTYADLYDTIFDDMIDRIPGI 164
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPFPGAWLEMM 240
+ + + + + Q ++G+ ++ + NF + ++ + N R + P
Sbjct: 165 LAGIYEGTIRATKQEKSGVYCSKFNAGMGNLGNFDKPSDYIVNLHRCMARPHGTGIFFYY 224
Query: 241 IGNKHERIKLLESQLVEGE---GKPGEVINPN---FTIACSQGAVRIMRL 284
G K+ K+ ++ E G PG+++N + V I L
Sbjct: 225 KGEKYYIGKITSGTDLQLENYLGIPGKIVNIESGVIWVKTRDNIVVISEL 274
>gi|222824234|ref|YP_002575808.1| formyltransferase, [Campylobacter lari RM2100]
gi|222539456|gb|ACM64557.1| formyltransferase, putative [Campylobacter lari RM2100]
Length = 296
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 65/320 (20%), Positives = 133/320 (41%), Gaps = 36/320 (11%)
Query: 1 MT---LRVVFMGTSEFAVATLQALVSSS-HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ 56
M L + + ++ + + ++ S SI V + P LK + K A+
Sbjct: 1 MKNKVLNIGYFADGKWGLNCFKQIIHSKKISIKFVVLRYANP----DLKLM-----KLAR 51
Query: 57 EFSLPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + E+ +N D+ V +++ + Q IL+ K N HA LP
Sbjct: 52 KKYIDCYIEQDVNHYSFIEKISKYNVDLLVSMSFDQIFKQPILDLYKNKIINCHAGKLPE 111
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+RG + A++ G+ + GI + +++ +D G + + + I N N L + +V C+
Sbjct: 112 YRGRNILNWALINGEKDFGITVHFVNEKIDDGDIILQKILKIKENYNYKMLLKISAVECS 171
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
+ +A+ N + Q Y ++ G+ +N+ N+HN I+ + +
Sbjct: 172 RLLFDALKLFVNNKVTSYKQNLKNGFYCKRRKSGDEIINWNDKRVNIHNFIKGVRGGGIS 231
Query: 236 WLEMMIGNKHERIKLLESQLVE---GEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGG 289
+ + N +IK+ +S++V+ G K GEV+ + I G ++I+ +
Sbjct: 232 AISYIQSN---KIKIFKSEIVDMYMGNKKNGEVVKANKKHIYINTIDGILKIISYK---- 284
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
D L + G I+
Sbjct: 285 -----ADIL----ISKGDIL 295
>gi|156846870|ref|XP_001646321.1| hypothetical protein Kpol_1032p57 [Vanderwaltozyma polyspora DSM
70294]
gi|156116996|gb|EDO18463.1| hypothetical protein Kpol_1032p57 [Vanderwaltozyma polyspora DSM
70294]
Length = 380
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 56/332 (16%), Positives = 110/332 (33%), Gaps = 37/332 (11%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-----SSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
L+++F G+ EF++ +L+AL S + V T+ P+ GR + +
Sbjct: 30 PLKILFFGSDEFSIHSLRALNDIKSTGSGILDSIQVVTRSPKWCGRGKSILKETPIMHVT 89
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
L + QE S + ++ V V++G +IP +L + N H SLLP+
Sbjct: 90 DTMGLQNALFCDNKQELISLRDSVDFNMIVAVSFGQLIPPELLEKSSWS-MNVHPSLLPK 148
Query: 116 WRGAAPIQR-------------AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNIN 162
++G++PIQ + +I+ L+ + V
Sbjct: 149 YKGSSPIQYSLLNRDEFTGVSIQTLHPTKFDHGSIICQTPPLNVAELLKKGTVSNFVEET 208
Query: 163 TAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENV 222
+ L + + + P+ K S + R
Sbjct: 209 PLKTAILMDQLGIAGGYLLKNIVLKGLYLQDPKTGYQPNPDIKPSYAPRIKSEQRKIHWE 268
Query: 223 HNHIRALSP--------FPGAWLEMMIGNKHERIKLLES-QLVEGEGK---PGEVINPN- 269
++ L+ + +++ + +RI E + +E + PG+
Sbjct: 269 NDDACTLTNKIGILGPLYTFKEVKLKSKDLLKRIIFHEVKETLERPAQLIYPGDFYYDGS 328
Query: 270 ---FTIAC-SQGAVRIMRLQRAGGRVLDIGDF 297
+ C + I +LQ G V F
Sbjct: 329 TKLLYVLCSGNTCISISKLQFEGFAVESAESF 360
>gi|302914826|ref|XP_003051224.1| hypothetical protein NECHADRAFT_41740 [Nectria haematococca mpVI
77-13-4]
gi|256732162|gb|EEU45511.1| hypothetical protein NECHADRAFT_41740 [Nectria haematococca mpVI
77-13-4]
Length = 370
Score = 60.7 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 92/255 (36%), Gaps = 11/255 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ +F+ A+L+A+ + V PP+ GR A
Sbjct: 33 PLRILFCGSDDFSCASLKAVYEEHSRNKDLIESLDVMVLPPKRMGRSFKTLREVPCKILA 92
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ L + E + + + + V++GL +P RIL + K G N H SLLP
Sbjct: 93 EDLGLRIHQRETFTKWELPEATN----LVIAVSFGLFVPPRILRSAKYGGLNVHPSLLPD 148
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKH-LDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
RG API AI+ G TG+++ +D D G V P +Q+ S+L
Sbjct: 149 LRGPAPIHHAILRGYRNTGVSLQTLDDKAFDHGTVLAQTPRPGIPIPPGCTVQELTSLLA 208
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
+ L Q + + K ++ ++ F
Sbjct: 209 PVGAQMLVQGLRDGVHVPPHQRVDWKAEDLRDRKLVHAPKVTKADGQINWGDWTADEFVR 268
Query: 235 AWLEMMIGNKHERIK 249
+ H K
Sbjct: 269 RVRVLGSIWTHAVNK 283
>gi|228937240|ref|ZP_04099923.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228822454|gb|EEM68400.1| Methionyl-tRNA formyltransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 315
Score = 60.3 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 57/291 (19%), Positives = 122/291 (41%), Gaps = 14/291 (4%)
Query: 4 RVVFMG--TSEFAVATLQALVSSS-HSIVSVYTQPP-RPAGRRGLKSVLSAVHKKAQEFS 59
+V+ S+F + LQ L+ S+ ++ T P + + + K+A++
Sbjct: 6 KVILFSEVNSKFGLPFLQELIQEPSISVEALVTSPEGKLCSYYIGEPDQVDLEKEAKDIG 65
Query: 60 LPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P L P KL + L D ++ Y ++ + IL+ K+ N H S LPR+ G
Sbjct: 66 IPVLRPDKLNDPNTVELLKNYNADYFILANYQKILKEDILSIPKVDTINFHPSPLPRYAG 125
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP G+ E G++ +++ +D GP+ V +S +++ +
Sbjct: 126 LAPFFWMAKNGEKEGGVSCIQVVPEIDAGPILAQLPVVMSGTETALEIRETHFKQSIILL 185
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + K++ N+ Q+ + TY + + + VN+ + E++ IRA P
Sbjct: 186 KQVLRKIKNNDFTSKLQLLSNRTYYSQPKEEDYFVNWEQDIESILRTIRAGYPQGA---- 241
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEV-----INPNFTIACSQGAVRIMRL 284
+ +E+I++L ++ E + + N ++ G + + +
Sbjct: 242 LAFNQYNEKIRILSAERTEYPQQIQSIGVFREHNNKILVSTKDGWLHLQMI 292
>gi|149237338|ref|XP_001524546.1| hypothetical protein LELG_04518 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452081|gb|EDK46337.1| hypothetical protein LELG_04518 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 385
Score = 60.3 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/334 (15%), Positives = 110/334 (32%), Gaps = 28/334 (8%)
Query: 2 TLRVVFMGTSEFAVATL---QALVSSS---HSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
LR+ F G+ F+ +L ++L + + T+ +P GR V A
Sbjct: 41 PLRIAFFGSDHFSTESLRQIKSLHDQDSSLIDNIKLITRLLKPTGRYMKSVSELPVGVFA 100
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+E + L L+ + ++ + V+YG +IP + K G N H S LP+
Sbjct: 101 KENQIDILRADTQEDIINFLQLN-SFNLVIAVSYGKLIPAEFIAKCKYGGLNVHPSFLPK 159
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
+ G++P+Q A++ D ETG+ + + D G + + +
Sbjct: 160 YSGSSPLQYALLNDDQETGVTVQTLHPTKFDHGNIVAKSHAVPILENDNYDSLAKKLGRI 219
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
++ ++ K P S + S + + R
Sbjct: 220 GGELLVSVIKDASFVNPKSILEFGEQKRTLAPKISKNESQVLWSESSSRHIKRQFDALGP 279
Query: 235 AWLEMMIGNKHERIKLLE----------------SQLVEGEG--KPG--EVINPNFTIAC 274
+ + + K ++ + E + + + KPG ++ I
Sbjct: 280 LFTFLNVKIKRKKQTIEEKQRAILYNVTELKMDPAVVAKQHNLTKPGDFTLVKDGLCIKA 339
Query: 275 SQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCI 308
+ G + ++ + F+ G +
Sbjct: 340 NTGFILAKGIKMQARAEMTPETFIGSYHKYAGNV 373
>gi|314966590|gb|EFT10689.1| formyl transferase protein [Propionibacterium acnes HL082PA2]
Length = 190
Score = 59.9 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLES 253
PQ G+T A +I + RV +A+ + N +R +SP PGAW E+ +R K+L +
Sbjct: 67 PQSVEGVTIAPQIHPDDVRVTVTAAAQEIDNLVRGVSPAPGAWAEL----DGKRFKILRT 122
Query: 254 QLVEG---------EGKPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
+ +E +PG+++ + + ++++Q R + D+ G
Sbjct: 123 RCLEAGDGVPSTVATAQPGQLVATRKQLFLGTGSQPLELLQVQAFSKRAMSGADWARGAD 182
Query: 303 VIIGCIV 309
+ G +
Sbjct: 183 IDAGTRL 189
>gi|114657619|ref|XP_001174301.1| PREDICTED: methionyl-tRNA formyltransferase, mitochondrial isoform
1 [Pan troglodytes]
Length = 304
Score = 59.9 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 60/265 (22%), Positives = 103/265 (38%), Gaps = 23/265 (8%)
Query: 50 AVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGH 109
V + A + LP + S DV VV ++G ++ + ++ G N H
Sbjct: 10 PVKQYAVQSQLPVYEWPDV--------GSGEYDVGVVASFGRLLNESLILKFPYGILNVH 61
Query: 110 ASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQ 168
S LPRWRG AP+ ++ GD TG+ IM++ D GP+ VP+ L+
Sbjct: 62 PSCLPRWRGPAPVIHTVLHGDTVTGVTIMQIRPKRFDVGPILKQETVPVPPKSTAKELEA 121
Query: 169 ELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR- 227
LS L A+ ++ + L ++ Q G TYA KIS G + + + +
Sbjct: 122 VLSRLGANMLISVLKNLPESLSNGRQQPMEGATYAPKISAGTSCIKWEEQTSEQIFRLYR 181
Query: 228 -------ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQ 276
+ + ++++ + L + +L PG VI + C
Sbjct: 182 AIGNIIPLQTLWMANTIKLLDLVEVNSSVLADPKLTGQALIPGSVIYHKQSQILLVYCKD 241
Query: 277 GAVRIMRLQRAGGRVLDIGDFLLGC 301
G + + + + L DF G
Sbjct: 242 GWIGVRSVML--KKSLTATDFYNGY 264
>gi|255533824|ref|YP_003094196.1| formyl transferase domain-containing protein [Pedobacter heparinus
DSM 2366]
gi|255346808|gb|ACU06134.1| formyl transferase domain protein [Pedobacter heparinus DSM 2366]
Length = 294
Score = 59.9 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 55/313 (17%), Positives = 109/313 (34%), Gaps = 27/313 (8%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M+ + + + L ++ + V+T + + +
Sbjct: 1 MSNYKFGILASGRLGFICLNEILKQVF-VGFVFT--DSKSNN---------IIDLCNSIN 48
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP V ++ F+ D + + Y ++ + I + K N H SLLP++RG
Sbjct: 49 LPVFVGNPRNEKSELFLKQFDVDFILSINYLYLVDESIFDFPKGYAINFHGSLLPKYRGR 108
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P AI+ + +TGI + K+ D G + + +PI + + E +
Sbjct: 109 TPHVWAIINNEIQTGITAHLISKNCDEGDIVYQEVIPIGPDTTGGDILAEFERRFPICIK 168
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
++ +E ++ Q TY K S + +N+ E + N +RA +
Sbjct: 169 SVIESIENGSIKPVAQNNEHATYYGKRSPKDGMINWNWQKERIKNWVRAQAKPYPGAFSY 228
Query: 240 MIGNKHERIKLLESQL-VEGEGKPGEVIN--PNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ K K+ + GEVI+ + GA+ ++ + G
Sbjct: 229 VNDKKIIIHKVKFVDIGFADNDVNGEVISVQEGIVVKTQNGALMLIDYEVEG-------- 280
Query: 297 FLLGCPVIIGCIV 309
IG I+
Sbjct: 281 ---SFNFEIGDIL 290
>gi|291532415|emb|CBL05528.1| hypothetical protein MHY_03970 [Megamonas hypermegale ART12/1]
Length = 64
Score = 59.9 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+V SE L+AL+ + +I++VYT P K +V+ A+ ++P
Sbjct: 6 IVVFAYSEPGYTCLKALIEAKANILAVYTHQDDP----DEKIWFHSVYDLAKANNIPVF 60
>gi|16550475|dbj|BAB70984.1| unnamed protein product [Homo sapiens]
gi|21707239|gb|AAH33687.1| Mitochondrial methionyl-tRNA formyltransferase [Homo sapiens]
gi|133777035|gb|AAH16630.2| Mitochondrial methionyl-tRNA formyltransferase [Homo sapiens]
Length = 304
Score = 59.9 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 60/265 (22%), Positives = 103/265 (38%), Gaps = 23/265 (8%)
Query: 50 AVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGH 109
V + A + LP + S DV VV ++G ++ + ++ G N H
Sbjct: 10 PVKQYAVQSQLPVYEWPDV--------GSGEYDVGVVASFGRLLNEALILKFPYGILNVH 61
Query: 110 ASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQ 168
S LPRWRG AP+ ++ GD TG+ IM++ D GP+ VP+ L+
Sbjct: 62 PSCLPRWRGPAPVIHTVLHGDTVTGVTIMQIRPKRFDVGPILKQETVPVPPKSTAKELEA 121
Query: 169 ELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR- 227
LS L A+ ++ + L ++ Q G TYA KIS G + + + +
Sbjct: 122 VLSRLGANMLISVLKNLPESLSNGRQQPMEGATYAPKISAGTSCIKWEEQTSEQIFRLYR 181
Query: 228 -------ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACSQ 276
+ + ++++ + L + +L PG VI + C
Sbjct: 182 AIGNIIPLQTLWMANTIKLLDLVEVNSSVLADPKLTGQALIPGSVIYHKQSQILLVYCKD 241
Query: 277 GAVRIMRLQRAGGRVLDIGDFLLGC 301
G + + + + L DF G
Sbjct: 242 GWIGVRSVML--KKSLTATDFYNGY 264
>gi|241852258|ref|XP_002415823.1| methionyl-tRNA formyltransferase, putative [Ixodes scapularis]
gi|215510037|gb|EEC19490.1| methionyl-tRNA formyltransferase, putative [Ixodes scapularis]
Length = 343
Score = 59.9 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 66/323 (20%), Positives = 126/323 (39%), Gaps = 44/323 (13%)
Query: 4 RVVFMGTSEFAVATLQALVSS-----SH-SIV---SVYTQPPRPAGRRGLKSVLSAVHKK 54
+V+F G+ F++ TL L + SH +V +V P+ S V
Sbjct: 22 KVLFYGSDNFSLKTLTLLNENRQKRTSHPQVVGSLAVVC--PK---------FKSPVRDY 70
Query: 55 AQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
A + SLP + D+ VVV++G +IP + A K G N H SLLP
Sbjct: 71 AAQESLPFNEWPCSIPPD-------TFDLGVVVSFGHMIPAADIEACKYGMINVHPSLLP 123
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
RWRGAAP+ ++AGD ++G++++ + DTG + ++V + ++ A ++ +
Sbjct: 124 RWRGAAPLIHTLLAGDTKSGVSVITVAPKRFDTGKIVAQQEVSVPPRVHLAAFTDIMADI 183
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A ++ + L Q G+T A K+++ + + + +
Sbjct: 184 GASMLLSCLQDLPLLLSQAREQPSEGMTKAAKVTQSMGVICWDSHTSEQIDRLYRALGNF 243
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN---------------FTIACSQGA 278
G K + +++ + V K +++ C G
Sbjct: 244 ATLTTFWKGAKIKLFDMVDPEEV-ASAKLDQLVKGRAIRPGYCYYHARRRILCFKCKDGW 302
Query: 279 VRIMRLQRAGGRVLDIGDFLLGC 301
+ ++ G + + +F G
Sbjct: 303 IAFRKVSLKGHKKMTATEFDCGF 325
>gi|302308901|ref|NP_986035.2| AFR488Wp [Ashbya gossypii ATCC 10895]
gi|299790850|gb|AAS53859.2| AFR488Wp [Ashbya gossypii ATCC 10895]
Length = 364
Score = 59.5 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Query: 2 TLRVVFMGTSEFAVATLQAL--VSSSHSIVS---VYTQPPRPAGRRGLKSVLSAVHKKAQ 56
L V+F G+ +F+ +L+AL + S IV + T+P + GR + V A+
Sbjct: 24 PLNVLFFGSDQFSAHSLRALAALQSG-RIVGDIQLVTRPAKRCGRYLQATRELPVVAAAR 82
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
E +LP + + +V + L + N H SLLPR+
Sbjct: 83 ELALPPPLRCDTRDDLLALRARAPRTNLLVAVSYGQLIPAELVRSVPHSLNVHPSLLPRY 142
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTG 147
RGAAPIQ ++ GD+ TG+++ +
Sbjct: 143 RGAAPIQHTLLNGDSTTGVSVQTLHPTRFDE 173
>gi|238765310|ref|ZP_04626237.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia kristensenii ATCC 33638]
gi|238696483|gb|EEP89273.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia kristensenii ATCC 33638]
Length = 628
Score = 59.1 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 63/239 (26%), Positives = 116/239 (48%), Gaps = 9/239 (3%)
Query: 52 HKKAQEFSLPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
K A + LP P + + + + + DV Y ++ IL++ G +N H
Sbjct: 2 AKVAADLELPVFAPEDVNHPLWIERIKQLHPDVIFSFYYRNMLCDDILSSAPRGGFNLHG 61
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL 170
SLLP++RG API A++ G+ ETG+ + +M K D GP+ KV IS L ++
Sbjct: 62 SLLPKYRGRAPINWALVNGETETGVTLHQMVKKADAGPIVGQHKVIISETDTALTLHAKM 121
Query: 171 SVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-AL 229
+ + + K++ +LPL PQ E +Y + + + + + +SA ++N +R
Sbjct: 122 RDAAQELLHDLLPKMKNASLPLLPQKEADASYFGRRTADDGEIFWQKSALEINNLVRAVT 181
Query: 230 SPFPGAWLEMMIGNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRIMRLQ 285
P+PGA+ + ++ + ++ + PG V++ + +AC +GA+ IM Q
Sbjct: 182 EPYPGAFSYLG----QRKLIVWRARPLNTVHSKLPGTVLSTSPLVVACGEGALEIMTGQ 236
>gi|120601423|ref|YP_965823.1| formyl transferase domain-containing protein [Desulfovibrio
vulgaris DP4]
gi|120561652|gb|ABM27396.1| formyl transferase domain protein [Desulfovibrio vulgaris DP4]
Length = 275
Score = 58.7 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 5/200 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+RV F G+ ++V L AL +S +V V T+ G G ++ + V +
Sbjct: 1 MRVAFFGSYAWSVDYLAALHASPRTDVVLVVTRHDD-FGTGGERTFTTPVTLWCEAQASG 59
Query: 60 LPALVPTK-LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ P G++ + DV V Y L++P+ + N H SLLP++RG
Sbjct: 60 IAVFKPRSLKGEDALAVIGAARPDVVVSAGYSLLLPEDLYRGVAQAGINVHPSLLPQYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
A P++RAI+ G ETG+++ + + D GP+ + + I N + +E + A A+
Sbjct: 120 ADPVRRAILDGVAETGVSLHLLTQAFDEGPLLWQHCIGIDPAWNAGDVLREAGHIAAPAL 179
Query: 179 VEAMDKLEQNNLPLSPQIEN 198
+ + L Q
Sbjct: 180 PDVVHGFVTGCLEPFDQQGE 199
>gi|253990493|ref|YP_003041849.1| hypothetical protein PAU_03019 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211638936|emb|CAR67551.1| Similar to proteins involved in antibiotic biosynthesis
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|253781943|emb|CAQ85107.1| Similar to proteins involved in antibiotic biosynthesis
[Photorhabdus asymbiotica]
Length = 6800
Score = 58.7 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 56/318 (17%), Positives = 105/318 (33%), Gaps = 33/318 (10%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALV 64
VV GT AV + + S+ H+I +V T + A + V
Sbjct: 39 VVVGGT-TLAVFCAEQIQSAGHTIQAVLTNDD-------------VLQTWAIRQGI---V 81
Query: 65 PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQR 124
+ +Q + D + ++ P ++ + G +N H S LPR+ G
Sbjct: 82 CVNSFEALQQQIMLHPVDWLFSIVNPIIPPMSLIEQIRSGAFNYHDSPLPRYAGRHATSW 141
Query: 125 AIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDK 184
A++A + I+ ++ +DTG +A V I + +T L + ++ +
Sbjct: 142 ALLARETYYAISWHCIEAGVDTGDIAVQWPVSIEEHDSTFSLNLKCYQAAQEGFIKLLQD 201
Query: 185 LEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRA-------LSPFPGAWL 237
L Q L PQ ++ + + + C
Sbjct: 202 LGQGTLITHPQDLTRRSFYAQSCRPDGGGYLCWEQSGEVLSALVRALDFGENYLNLLGCP 261
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRI---MRLQRAGGRV 291
++++ RI L+ PG +I+ + + VRI L G V
Sbjct: 262 KVLLKQGTVRISWLQRLNGCSGTAPGTLIDVAEDVWQVTTGSEDVRIGGFTTL--EGK-V 318
Query: 292 LDIGDFLLGCPVIIGCIV 309
L G+ + G +
Sbjct: 319 LSAGELAAISELKPGKSL 336
>gi|169837247|ref|ZP_02870435.1| hypothetical protein cdivTM_09139 [candidate division TM7
single-cell isolate TM7a]
Length = 65
Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 1 MTLR---VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRP 38
M + ++F GT +F++ TL+ALV + +I +V T+P
Sbjct: 1 MKKKSKTIIFFGTEDFSLITLKALVEAGFNIGAVVTKPDAR 41
>gi|46581402|ref|YP_012210.1| methionyl-tRNA formyltransferase [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450824|gb|AAS97470.1| methionyl-tRNA formyltransferase, putative [Desulfovibrio vulgaris
str. Hildenborough]
gi|311235059|gb|ADP87913.1| formyl transferase domain protein [Desulfovibrio vulgaris RCH1]
Length = 275
Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF--S 59
+RV F G+ ++V L AL +S +V V T+ G G ++ + V + +
Sbjct: 1 MRVAFFGSYAWSVDYLAALHASPRTDVVLVVTRHDD-LGSGGERTFATPVTEWCEAQVSG 59
Query: 60 LPALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ P L ++ + DV V Y L++P+ + N H SLLP++RG
Sbjct: 60 IAVFKPRSLKGDDALAVIGAARPDVVVSAGYSLLLPEDLYGGVAQAGINVHPSLLPQYRG 119
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNIN 162
A P++RAI+ G ETG+++ + + D GP+ + ++ I N
Sbjct: 120 ADPVRRAILDGVAETGVSLHLLTQAFDEGPLLWQHRIGIDPAWN 163
>gi|319639405|ref|ZP_07994155.1| formyl transferase [Neisseria mucosa C102]
gi|317399300|gb|EFV79971.1| formyl transferase [Neisseria mucosa C102]
Length = 259
Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/258 (19%), Positives = 87/258 (33%), Gaps = 13/258 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMG + + L+ L H IV V T S AQE LP
Sbjct: 1 MKILFMGRKQVSANLLRFLTKQDHIEIVGVLT---------DSHLQGSPTAAAAQELGLP 51
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ E L D+ + V Y + L+ LG N H +LLP ++G
Sbjct: 52 LYTFDTALEAMREGRLK--YDLGLSVLYWRKLRDEFLSIPTLGTINFHPALLPEYKGTGG 109
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
AIM ++ G +D +DTG + + + PI + TA + ++ +
Sbjct: 110 YNLAIMDELDQWGNTAHYVDASIDTGEIIEVDRFPIDAETETAQSLERKTMQALEPFAQR 169
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS-PFPGAWLEMM 240
+ + P N + E P+ GA++E+
Sbjct: 170 IIARAIESKTKLPTTPNIGGRYVSRDEMEAMKQILDGDNIEKKIRAFWFPPYDGAYVEIN 229
Query: 241 IGNKHERIKLLESQLVEG 258
+ L ++
Sbjct: 230 GQKYTLINRQLLEEIAPK 247
>gi|238787102|ref|ZP_04630902.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia frederiksenii ATCC 33641]
gi|238724890|gb|EEQ16530.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia frederiksenii ATCC 33641]
Length = 623
Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 15/258 (5%)
Query: 52 HKKAQEFSLPAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
+ A E LP E+ D+ Y +I IL++ G +N H
Sbjct: 2 ARVAAELELPVFAPEDVNHPLWIERIQQMQPDIIFSFYYRNMICDEILSSAPRGGFNLHG 61
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL 170
SLLP++RG API A++ G+ ETG+ + KM K D GP+ KV IS L ++
Sbjct: 62 SLLPKYRGRAPINWALVNGEKETGVTLHKMVKKADAGPIVGQHKVIISEADTALTLHAKM 121
Query: 171 SVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-AL 229
+ + + K+ +L L PQ E +Y + + + +++ +SA ++N +R
Sbjct: 122 RDAAQELLHDLLPKMNSASLHLVPQKEADASYFGRRTAADGEIHWQKSALEINNLVRAVT 181
Query: 230 SPFPGAWLEMMIGNKHERIKLLESQLVEGEGK--PGEVINPN-FTIACSQGAVRIMRLQR 286
P+PGA+ + ++ + S+ ++ + PG V++ + IAC +GA+ ++ Q
Sbjct: 182 EPYPGAFSYLG----QRQLIIWRSRPLDIAHEKLPGTVLSTSPLIIACGKGALEVVTGQG 237
Query: 287 AGGRVLDIGDFLLGCPVI 304
G ++ G +
Sbjct: 238 E------AGLYVQGSRLA 249
>gi|296826956|ref|XP_002851060.1| mitochondrial formyl-methionyl-tRNA transformylase [Arthroderma
otae CBS 113480]
gi|238838614|gb|EEQ28276.1| mitochondrial formyl-methionyl-tRNA transformylase [Arthroderma
otae CBS 113480]
Length = 382
Score = 58.7 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 64/336 (19%), Positives = 111/336 (33%), Gaps = 58/336 (17%)
Query: 2 TLRVVFMGTSEFAVATLQALV----SSSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ EF++A+L AL +I S V +P + A
Sbjct: 34 PLRILFCGSDEFSIASLNALHTERVKDPDTIASIDVVCRP-------------VPIKAVA 80
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
E +LP + + ++ + V++GL IP RIL K G N H SLLP
Sbjct: 81 TELALPIHEVDTFTKWAPPKPRGEPINLIIAVSFGLFIPPRILKGAKYGGLNVHPSLLP- 139
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS---- 171
GAAP+ ++AGD TGI + +D + + I
Sbjct: 140 -EGAAPLHHTLLAGDRTTGITLQTLDTARFDHGLILDQTPAPGFPIPDPDSCDLPRLLKL 198
Query: 172 -------VLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHN 224
+L L SP E+ + A+KI + + + +
Sbjct: 199 VSTKGAEMLVKGIRNRVFVPPLNPILRQSPVEESALRPAKKIKPEDRHIIWNTWNWDTLR 258
Query: 225 HIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI------------------ 266
+ + + + E + +++ G KP E I
Sbjct: 259 RHQIVLGALWSTAALTPATPGEEHLVPRKRIIFGTMKPVETIPGSNDVPSTQPGVPFTFK 318
Query: 267 -------NPNFTIACSQG-AVRIMRLQRAGGRVLDI 294
+ + + G + I ++ G R+
Sbjct: 319 DPTKKKEDGQLFVFTNDGKLLEIEEMKVEGERMTSA 354
>gi|301307930|ref|ZP_07213885.1| putative formyl transferase [Bacteroides sp. 20_3]
gi|300834071|gb|EFK64686.1| putative formyl transferase [Bacteroides sp. 20_3]
Length = 285
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/292 (17%), Positives = 104/292 (35%), Gaps = 20/292 (6%)
Query: 1 MT--LRVVFMGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
M L V+F+G L + + +I V T G R
Sbjct: 1 MKDQLSVIFIGGLSNGKIIYDYLNKNRYVNISLVITYSDTYQGARHTILG---------- 50
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
P ++ D+ +V + +IP IL+ ++G H + LP R
Sbjct: 51 -DGPKFRKKNTVKDCIHAIKDLAPDLIIVAGWSELIPNEILSIPRMGVIGFHPAKLPFDR 109
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
G + + I G ET + + K + D G + + I+SN + ++ +
Sbjct: 110 GRSVLAWQIEDGYTETSLTMFKYSDYPDGGDILAQETIAIASNDYINDILDKVDAASLNL 169
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAW 236
+ L + L Q + ++ S ++ + + R++ ++N IR P+PGA
Sbjct: 170 IRAYFPLLRKGFLKGVKQDLSVGSFRRLRSADDSIIKWDRNSVEIYNKIRAISHPYPGAT 229
Query: 237 LEMMIGNK-HERIKLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMR 283
+ + +++ S + KPG ++ + + +R+
Sbjct: 230 TKFDDKTMLVWKSEIISSFPFPVDTKPGTIVAQCYDNTLIVKTRDAYLRLTE 281
>gi|167836345|ref|ZP_02463228.1| hypothetical protein Bpse38_07636 [Burkholderia thailandensis
MSMB43]
Length = 236
Score = 58.4 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/217 (24%), Positives = 88/217 (40%), Gaps = 5/217 (2%)
Query: 16 ATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP-TKLGQEEYE 74
LQ L++ + V T P K +V A E + + P G +
Sbjct: 1 RCLQVLLARGVDVALVVTHEDSPTE----KIWFGSVAAVAAEHGIAVITPADPAGADVRA 56
Query: 75 QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETG 134
S D Y ++P +L G YN H SLLP++RG P A++ G+ ETG
Sbjct: 57 AVASAKPDFIFSFYYRHMLPADLLALAARGAYNMHGSLLPKYRGRVPTNWAVLNGETETG 116
Query: 135 IAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSP 194
+ +M D G + VPI + A + +++V + + L P P
Sbjct: 117 ATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLWRVLPALLAGEAPHLP 176
Query: 195 QIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
+ +Y + RV++ + A V+N IRA++P
Sbjct: 177 NDLSQGSYYGGRKPEDGRVDWSQPAATVYNLIRAVAP 213
>gi|1172651|sp|P46071|PRTH_PORGI RecName: Full=Protease prtH
gi|440338|gb|AAA51298.1| neutral protease large subunit [Porphyromonas gingivalis]
Length = 989
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 19 QALVSSSHSIVSVYTQ-PPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFL 77
+ LV + + + +V T +P G RG K S V AQE LP L P L +E + L
Sbjct: 864 ELLVENGYQVKAVVTMLGTKPMG-RGHKVSPSMVKLYAQELGLPILQPDNLNEESFLDEL 922
Query: 78 SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+V ++P+ + +G N H SLLP +RGAAPIQ
Sbjct: 923 RTYQPHLQIVVAFRMLPRSVWQMPPMGTINLHGSLLPMYRGAAPIQ 968
>gi|157164456|ref|YP_001467367.1| adenine phosphoribosyltransferase (aprt) [Campylobacter concisus
13826]
gi|112802012|gb|EAT99356.1| putative methionyl-tRNA formyltransferase [Campylobacter concisus
13826]
Length = 335
Score = 58.0 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 63/295 (21%), Positives = 127/295 (43%), Gaps = 18/295 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
LR+ F+G ++ AV + ++ + I V++ G + ++ A +++
Sbjct: 5 KLRIYFLGGTKRAVGLYKKILDRN-DIEIVFSIF--MQGYQEEHIFCESLIDLASKYNKD 61
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVV-VAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+V + ++ ++ DV + + +IP+ LNA+K G H S LP++RG A
Sbjct: 62 FVVSEIITKDIVDKINRDFPDVVICGGIWRNLIPEDFLNASKYGCLALHGSGLPKYRGWA 121
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGP-------VAFMRKVPISSNINTAGLQQELSVL 173
I I+ G++E + + ++ LD GP K+P+++ + + ++ +
Sbjct: 122 GINWYIINGEDEYVMRMFRLGNGLDNGPLILRSDKTFMEYKIPLNNTKHIHEILDDIYDV 181
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL-SPF 232
A +E D L +N+ Q E+ TY + + +++ S +N+ N IRA P+
Sbjct: 182 HNKAYMELFDLLISDNIFFIDQNEDDATYTCSRTADDGEIDWKNSTKNIFNFIRAQSKPY 241
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEGEGK-PGEVI-----NPNFTIACSQGAVRI 281
GA+ L V G+ PG+V+ + + G + I
Sbjct: 242 AGAYTFFNGDKVVLWKVLPRYDYVNYIGRIPGKVVTRSKERNSVVVLTGDGGIEI 296
>gi|260429387|ref|ZP_05783364.1| non-ribosomal peptide synthetase [Citreicella sp. SE45]
gi|260420010|gb|EEX13263.1| non-ribosomal peptide synthetase [Citreicella sp. SE45]
Length = 1561
Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/283 (19%), Positives = 101/283 (35%), Gaps = 24/283 (8%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
V +G V + L+ + H+I +V T+ P + A+ L + P
Sbjct: 7 VVIGNESLLVQCAEKLLGAGHAIRAVVTRNP-------------EISAWAEGRGLAVVAP 53
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
E + D + +A ++P +L G N H LPR G A
Sbjct: 54 GHGLARRLEG---LSFDWLLSIANLDMLPAEVLAMPARGAVNFHDGPLPRHAGLNAPVWA 110
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
++AG++ GI ++ +D G + R I+ L + + +++L
Sbjct: 111 LIAGEHRHGITWHMIEGGIDEGDILVSRGFDIAPTDTALTLNTRAYEAAIDSFGDLIEQL 170
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE-MMIGNK 244
E + Q + +Y + + + G + +
Sbjct: 171 EHGLRRVR-QDLSQRSYHALADRPSGHGLLDFTRPAPELARLVRALDHGGYANPLSAPKI 229
Query: 245 HERIKLL---ESQLVEGEGKPGEVI---NPNFTIACSQGAVRI 281
R +L + V GEG PGEV+ + + T+AC GA+R+
Sbjct: 230 RARGRLWLVGGAVAVGGEGAPGEVLEASDDHLTVACGSGALRL 272
>gi|291279519|ref|YP_003496354.1| hypothetical protein DEFDS_1129 [Deferribacter desulfuricans SSM1]
gi|290754221|dbj|BAI80598.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 298
Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/288 (19%), Positives = 111/288 (38%), Gaps = 19/288 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ + L+ L +S + V+T P + + K A++FS+
Sbjct: 1 MKLALFLDNFIGYRLLEILSNSGLKDLRVFTYHPNTK----RTNQVYDFSKFARDFSITY 56
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L +Y + ++ V + I T H SLLP +RG I
Sbjct: 57 LD-----GNKYSFVKNKIKNIDVALCIDWTKDFFINENTSFKILYAHPSLLPYYRGYGAI 111
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
G ++G+ I + +D GP+ F + I + ++ + +
Sbjct: 112 SEQFFRGVVKSGLTIYEPIDKVDAGPILFQDVIKIEFDDYPVDFIEKYIEKVEIFIDNLL 171
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ N PQ + Y + K + ++F +SA V+NHIRA + +
Sbjct: 172 NNKVNFN-NSIPQNDELGFYLVRKRKKDAIIDFNKSAYAVYNHIRA---YSYPFFGAFAI 227
Query: 243 NKHERIKLLESQLVEGEGK---PGEVIN---PNFTIACSQGAVRIMRL 284
+K+E++ + ++ + + +G PG VI +AC G + + ++
Sbjct: 228 SKNEKVTIWKAHIEKWDGDYGYPGTVIKKTKNGIEVACGSGTIIVSKI 275
>gi|296005365|ref|XP_001349869.2| methionyl-tRNA formyltransferase, putative [Plasmodium falciparum
3D7]
gi|225631947|emb|CAD52276.2| methionyl-tRNA formyltransferase, putative [Plasmodium falciparum
3D7]
Length = 665
Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/234 (17%), Positives = 98/234 (41%), Gaps = 8/234 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALV----SSSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
++++F+G++E++ + ++ + I+ V T+ PR G R L S V +A
Sbjct: 259 PIKLLFIGSNEYSNLCFKIILLIIKRLRNDIILDNVITKSPRRKG-RNLILKKSNVEDEA 317
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ ++ KL + D+ + +++G + K ++ H SLLP
Sbjct: 318 IKNNINVFYYDKLKNNIHMLQNK-KMDLCISISFGEIFNCNFFKTIKSNIFSLHPSLLPF 376
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
++GA+PIQR+++ + G ++ ++D+G V + +SN N + L
Sbjct: 377 YKGASPIQRSLLNNEILYGYSVFLTTLNIDSGNVIMKKPFWFNSNYNFNDIITILFTQGT 436
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL 229
++++ + L N + + E+ + + ++ N +
Sbjct: 437 LSLLKNISYLANYNKDIPHKNIYNNNICEETKNNLNQNHVQNKYDSEINIHNSN 490
>gi|254565503|ref|XP_002489862.1| Methionyl-tRNA formyltransferase, catalyzes the formylation of
initiator Met-tRNA in mitochondria [Pichia pastoris
GS115]
gi|238029658|emb|CAY67581.1| Methionyl-tRNA formyltransferase, catalyzes the formylation of
initiator Met-tRNA in mitochondria [Pichia pastoris
GS115]
Length = 370
Score = 57.6 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 58/329 (17%), Positives = 112/329 (34%), Gaps = 26/329 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVS---SSHSI--VSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
L+V + G+ F++ L L++ H I + + + + GR + + + + A+
Sbjct: 34 LKVAYFGSDFFSIRCLDHLMNLSFKQHHIGTLDLIAKHSKRGGRGNKQILETPIVSYAKL 93
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
L L K + E + + D+A+ V+YG +IPQ L + + G N H SLLP++
Sbjct: 94 KQLNILRAEKNSE--IESLSANSYDLAIAVSYGKLIPQTFLKSLRYGGLNVHPSLLPKYS 151
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
G AP+Q I+ GD+ TG+ + + ++V ++ + L
Sbjct: 152 GPAPLQHTILNGDSVTGVTVQALHPTTFDKGSVLKQEVCHDYRPDSETTESLGLKLADLG 211
Query: 178 MVEAMDKLEQNNLP-LSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
D ++ + P+ K + I G
Sbjct: 212 GPLLSDVVKFTFDNLILPEPVETSNEYSYAPKPSPSLYQINWNVLSTTEIIRRFNALGPL 271
Query: 237 LEMMIGNKHERI-----------KLLESQLVEGEG-----KPGEV--INPNFTIACSQGA 278
+ ++ K+ + PG + I G
Sbjct: 272 YTFKHCHVVKKPPFTGLKRVILDKISPIADISSNLSAELTTPGMFTSVEDGLIIKSLDGY 331
Query: 279 VRIMRLQRAGGRVLDIGDFLLGCPVIIGC 307
+++ L+ G D F+ P G
Sbjct: 332 IKVKSLKFQGFGSQDSNSFMASLPKRTGD 360
>gi|332184531|gb|AEE26785.1| hypothetical protein FN3523_1482 [Francisella cf. novicida 3523]
Length = 402
Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 101/280 (36%), Gaps = 24/280 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH----SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
+++ G + A+ L+ ++ + + I++V + G + + K +
Sbjct: 1 MKICIAGKNNIAIEILEFIIKNKYFDKKDILAVCNKTDD-----GNDNWQRSFKKYCHQN 55
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ + ++ + E FLS D +V +N H SLLP ++G
Sbjct: 56 QVRLVFLEEIYEIENLLFLSLEFDKIIVPENFKT----------GKLFNIHFSLLPSYKG 105
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
I+ + TG+ + ++D+ +DTG + K+ I N L + +
Sbjct: 106 MYTSIMPILYNEEYTGVTLHEIDRGIDTGNIIAQTKIKIDFNDTARDLYHKYIKYGIQLV 165
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + + PQ +Y K S + + ++ H + + +
Sbjct: 166 KDNFEDIVCERYKSKPQSFESSSYFSKKSIDFSNIIIDLRQTALNIHNQIRAFNFREYQT 225
Query: 239 MMIGNKHER-IKLLESQLVEGEGKPGEVINPN-FTIACSQ 276
I K+L + +E KPG+++ N I +
Sbjct: 226 PSILGYKIISTKILPEKSIE---KPGKILEENSLYIRTAT 262
>gi|189196196|ref|XP_001934436.1| methionyl-tRNA formyltransferase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187980315|gb|EDU46941.1| methionyl-tRNA formyltransferase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 357
Score = 57.6 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 60/284 (21%), Positives = 106/284 (37%), Gaps = 20/284 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS-------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G EF++A+L+A+V++ H I V +P +P GR + + A
Sbjct: 33 LRILFCGADEFSIASLRAVVAAQRHVPGLIHDI-HVLHRPAKPTGRGLKTLREVPIKRVA 91
Query: 56 -QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
+E +L +S + + V++GL++P RIL + G N H SLLP
Sbjct: 92 TEELNLSTHAVDTFTGWTPPIPIS----LIIAVSFGLLVPPRILRHAQYGGLNVHPSLLP 147
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
G API+ AI G TG+ + + + I EL
Sbjct: 148 DLHGPAPIEHAITKGREYTGVTVQTLHPLHFDQGTILAQTPHPGVAIPHGTTAPELERQL 207
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL----- 229
A A E + + ++ + P G +
Sbjct: 208 AKAGAELLVHVLKSRRFVPPHEPAGWYATSNGPVSHAPKTTKQDRFVDFGQHTLAEILAK 267
Query: 230 -SPFPGAWLEMMIGNKHERIKLLESQLVEGEG-KPGEVINPNFT 271
F +W + G++ ++++ +++ PG I+P T
Sbjct: 268 LHAFGDSWCTLPNGDRLILHDIVDTGMIDAAQRAPGIFIDPTLT 311
>gi|85100424|ref|XP_960959.1| hypothetical protein NCU04313 [Neurospora crassa OR74A]
gi|28922493|gb|EAA31723.1| predicted protein [Neurospora crassa OR74A]
Length = 527
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ F+ +L+AL + + V +P + GR + + A
Sbjct: 61 PLRILFCGSDVFSCYSLKALHAEHKANPGLIKSIDVMVRPGKAFGRGYKEIRQVPIQNLA 120
Query: 56 QEFSLPALVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
+E SLP + + ++ V V++GL +P RILN K G N H SLLP
Sbjct: 121 EELSLPIHIRDTFTGWSLPQSPHGEPINLIVAVSFGLFVPPRILNQAKYGGLNVHPSLLP 180
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTG 147
RG AP+ A++ + TG+++ +
Sbjct: 181 DLRGPAPLHHALLNRLSHTGVSLQTLSPQTFDA 213
>gi|289451118|gb|ADC94033.1| methionyl-tRNA formyltransferase [Leptospira interrogans serovar
Grippotyphosa]
Length = 280
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 54/291 (18%), Positives = 110/291 (37%), Gaps = 19/291 (6%)
Query: 3 LR-VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ +VF G + L L + +++ T AV A + +P
Sbjct: 1 MNTIVFCGFGKLGYLCLSTLYDEGYVPLAILTHKD---------MSEEAVDYFASQKKIP 51
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ + ++ I + L N H SLLP++RG P
Sbjct: 52 FYYSDLRKDHNLMSEMNSVSFTYLISVNYRYIIPQNLLNRAKYPLNLHGSLLPKYRGRTP 111
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
AI+ G+++TG+ M+ +DTGP+ ++ I + + ++ + ++E+
Sbjct: 112 HVWAIINGEHKTGVTCHVMESTVDTGPIYKQIELNIKNEDTGGSILEKFYEIYPLCLMES 171
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL---SPFPGAWLE 238
+ ++++ P PQ TY K + ++ R+ + V N IRA P +L
Sbjct: 172 LTQIQKGIQP-KPQNHLFATYFGKRTPEMGYIDVKRNVQGVLNFIRAQARPYPGAYLYLP 230
Query: 239 MMIGNKHERIKLLESQLVEGEGKPG--EVINPNFTIACSQGAVRIM--RLQ 285
K+ E + E + G + ++ + + G + I +Q
Sbjct: 231 TGQKLIAHAAKIFELR-EEVIDEIGMSQYVDEGYLLTLINGKILITDYEIQ 280
>gi|325192797|emb|CCA27200.1| unnamed protein product [Albugo laibachii Nc14]
Length = 291
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 65/286 (22%), Positives = 113/286 (39%), Gaps = 26/286 (9%)
Query: 44 LKSVLSAVHKKAQEFSLPALVPTKLGQ--EEYEQFLSFNADVAVVVAYGLVIPQRILNAT 101
+ V + A + L + + + DV VVV++G + +L+
Sbjct: 1 MTKNPVPVKRYAMDHGLSFTETPSHLKSLKYWTHPNKSPFDVGVVVSFGYFLYPHLLDDL 60
Query: 102 KLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSN 160
K G N H SLLP++RG API A++ GD TG++I+++D DTG + + PI N
Sbjct: 61 KHGAINMHPSLLPKYRGPAPIHHALLNGDRTTGVSIIEIDPLAFDTGRILLQKPFPIPEN 120
Query: 161 INTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAE 220
I L LS A ++E + L + Q + + A K+ + F SA
Sbjct: 121 ITFQPLATSLSEFGASCVLETLRSLPHLREHATVQNNSQASKAPKVRFEHGFLTFKESAI 180
Query: 221 NVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEG------------KPGEVINP 268
+ + L G ++ +R+KL ++ + E PG
Sbjct: 181 EIFQKWQTLGDSVGLSVQFKG----KRVKLCKTAIPSQELMATVDQKRYQGLSPGTFFFD 236
Query: 269 ----NFTIACS-QGAVRIMRLQRAGGRVLDIGDFLLGCPV--IIGC 307
+ C+ + I LQ+ ++ + DF+ G + G
Sbjct: 237 TQMKALWLRCAQDSWLTIFSLQQEDRKIGEALDFVNGYRLRHKTGT 282
>gi|307329306|ref|ZP_07608470.1| amino acid adenylation domain protein [Streptomyces violaceusniger
Tu 4113]
gi|306885095|gb|EFN16117.1| amino acid adenylation domain protein [Streptomyces violaceusniger
Tu 4113]
Length = 3756
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 52/302 (17%), Positives = 95/302 (31%), Gaps = 32/302 (10%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++R V +G +ALV+ H I +V T G + S A + +P
Sbjct: 3 SMRSVLIGGGSVLARCGEALVAKGHRIAAVVT---------GDATARS----WAVKAGIP 49
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ + D+ + V V+P+ +L N H LP + G
Sbjct: 50 HHELAEAVALAPR----LSCDLLLSVGNYAVVPEALLGCATRAAVNYHYGPLPEYSGLHT 105
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
AI G E I +M + +D G V V I L + ++
Sbjct: 106 PSWAIADGAREYAITWHRMAEVVDGGEVLRRVPVAIEPEDTALSLGLKCDEAAVASLAGL 165
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRS--------AENVHNHIRALSPFP 233
+D++ + +PQ Y + ++ + ++ SP
Sbjct: 166 IDEIAEGRETSAPQNSATRRYFSRHTQFAGEGLIDWNLPAERIAAMVRATDYGPFASPLV 225
Query: 234 GAWLEMMIGNKHER--IKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRL-QR 286
+ + R + + PG V++ +A G+V + RL
Sbjct: 226 WPKVNLGGHFHAVRAARAQTGAAADDAAAAPGTVLSCDDASGLRVATGAGSVALARLCTL 285
Query: 287 AG 288
G
Sbjct: 286 EG 287
>gi|70947635|ref|XP_743414.1| methionyl-tRNA formyltransferase [Plasmodium chabaudi chabaudi]
gi|56522900|emb|CAH74744.1| methionyl-tRNA formyltransferase, putative [Plasmodium chabaudi
chabaudi]
Length = 652
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 79/189 (41%), Gaps = 8/189 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALV------SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
+ ++F+G++EF+ + ++ + I +V T+ P+ G R L S V ++A
Sbjct: 238 KINLLFIGSNEFSSLCFKIILLIIKVLRNDIVIENVITKSPQKKG-RHLLINKSPVEEEA 296
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ + KL + + V +++G + + Y H SLLP
Sbjct: 297 KKNKINVFYYDKLKNNIHLLKNKQFN-LGVSISFGEIFNTKFFKTINTNIYTLHPSLLPS 355
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
++GA+PIQR+++ ++ G I +D+G ++ S N + +
Sbjct: 356 YKGASPIQRSLLNNESLFGYTIFLTKLKIDSGASLIKKRFLFSPYFNFNDIITIMFTFGT 415
Query: 176 HAMVEAMDK 184
++ +
Sbjct: 416 LHFMKNIFF 424
Score = 41.4 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 17/155 (10%), Positives = 34/155 (21%), Gaps = 7/155 (4%)
Query: 156 PISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNF 215
+ N +
Sbjct: 503 NNMPYEYYTNNCYAPKIKVEEKYTCFFCFTSLYIHNKVRSFINWPKAECTLFLLHDNKIR 562
Query: 216 CRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACS 275
A+ + +P E N + K + + V I C
Sbjct: 563 KIEAKLIKTSYNLSNPQNDNIYEHTPFNTMDDHKCFDDIPRKYAI----VDKECINILCK 618
Query: 276 QGAV-RIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ +I +LQR +++D F+ + G I+
Sbjct: 619 NNTLLKIYKLQRKNKKIMDAITFIN--SINRGSIL 651
>gi|284800132|ref|ZP_06390553.1| putative methionyl-tRNA formyltransferase [Neisseria subflava
NJ9703]
gi|284795830|gb|EFC51177.1| putative methionyl-tRNA formyltransferase [Neisseria subflava
NJ9703]
Length = 266
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/259 (19%), Positives = 87/259 (33%), Gaps = 13/259 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+++++FMG + + L+ L H I+ V T S AQE L
Sbjct: 7 SMKILFMGRKQVSANLLRFLTKQDHIEIIGVLT---------DSHLQGSPTTAAAQELGL 57
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P + E L D+ + V Y + L+ LG N H +LLP ++G
Sbjct: 58 PLYTFDTALEAMREGRLK--YDLGLSVLYWRKLRDEFLSIPTLGTINFHPALLPEYKGTG 115
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
AIM NE G +D +DTG + + + PI + TA + ++
Sbjct: 116 GYNLAIMDELNEWGNTAHYVDASIDTGEIIEVDRFPIDAETETAQSLERKTMQALEDFAR 175
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS-PFPGAWLEM 239
+ + P N + E P+ GA++E+
Sbjct: 176 RIITRAIESKTKLPTTPNIGGRYVSRDEMEAMKQIHDGDNIEKKIRAFWFPPYDGAYVEI 235
Query: 240 MIGNKHERIKLLESQLVEG 258
+ L ++
Sbjct: 236 NGQKYTLINRQLLEEIAPK 254
>gi|330932170|ref|XP_003303678.1| hypothetical protein PTT_15990 [Pyrenophora teres f. teres 0-1]
gi|311320168|gb|EFQ88226.1| hypothetical protein PTT_15990 [Pyrenophora teres f. teres 0-1]
Length = 357
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 60/284 (21%), Positives = 108/284 (38%), Gaps = 18/284 (6%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVS------VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G EF++A+L+A+V++ + V +P +P GR + + A
Sbjct: 32 PLRILFCGADEFSIASLRAVVATQRHVPGLIQDIHVLHRPAKPTGRGLKTLREVPIKRVA 91
Query: 56 -QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
+E SLP +S + + V++GL++P RIL + G N H SLLP
Sbjct: 92 TEELSLPTHAVDTFTGWTPPIPIS----LVIAVSFGLLVPPRILRHAQYGGLNVHPSLLP 147
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
G API+ AI+ G TG+ + + + + +EL
Sbjct: 148 DLHGPAPIEHAIIKGREYTGVTVQTLHPQHFDQGTILAQTPHPGVAVPHGTTARELERQL 207
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAE------NVHNHIRA 228
A A E + + ++ + P G + + +
Sbjct: 208 AKAGAELLVHVLKSRKFVPPHEPAGWYATSNGPVSHAPKTTKQDRFVDFGQDTLAEILAK 267
Query: 229 LSPFPGAWLEMMIGNKHERIKLLESQLVEGEG-KPGEVINPNFT 271
L F W + G++ ++++ + + PG I P T
Sbjct: 268 LHAFGDPWCTLPNGDRLILHDIVDTGITDAAQRAPGIFIEPTLT 311
>gi|241759461|ref|ZP_04757565.1| formyl transferase family protein [Neisseria flavescens SK114]
gi|241320243|gb|EER56576.1| formyl transferase family protein [Neisseria flavescens SK114]
Length = 259
Score = 57.2 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 52/258 (20%), Positives = 86/258 (33%), Gaps = 13/258 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSH-SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++++FMG + + L+ L H IV V T S AQE LP
Sbjct: 1 MKILFMGRKQVSANLLRFLTKQDHIEIVGVLT---------DSHLQGSPTTAAAQELGLP 51
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ E L D+ + V Y + L+ LG N H +LLP ++G
Sbjct: 52 LYTFDTALEAMREGRLK--YDLGLSVLYWRKLRDEFLSIPTLGTINFHPALLPEYKGTGG 109
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
AIM NE G +D +DTG + + + PI + TA + ++
Sbjct: 110 YNLAIMDELNEWGNTAHYVDASIDTGEIIEVDRFPIEAETETAQSLERKTMQALEDFARH 169
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS-PFPGAWLEMM 240
+ + P N + E P+ GA++E+
Sbjct: 170 IITRAIESKTKLPTTPNTGGRYVSRDEMEAMKQIRDGDNIEKKIRAFWFPPYDGAYVEIN 229
Query: 241 IGNKHERIKLLESQLVEG 258
+ L ++
Sbjct: 230 GQKYTLINRQLLEEIAPK 247
>gi|146324381|ref|XP_750585.2| methionyl-tRNA formyltransferase family protein [Aspergillus
fumigatus Af293]
gi|129557218|gb|EAL88547.2| methionyl-tRNA formyltransferase family protein, putative
[Aspergillus fumigatus Af293]
gi|159124141|gb|EDP49259.1| methionyl-tRNA formyltransferase family protein, putative
[Aspergillus fumigatus A1163]
Length = 388
Score = 56.8 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 17/129 (13%)
Query: 2 TLRVVFMGTSEFAVATLQALVS----SSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G EF++A+L+AL I S V +P + GR + A
Sbjct: 34 PLRILFCGADEFSIASLKALHEEHVRRPDRISSIDVVCRPGKRVGR-------VPIKAVA 86
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
E SLP + ++ V V++GL +P RILNA K G N H SLLP
Sbjct: 87 TELSLPIHEIDTFKG----WAVEYSPRRLVAVSFGLFVPPRILNAAKYGGLNVHPSLLPD 142
Query: 116 WRGAAPIQR 124
+RG AP+
Sbjct: 143 FRGPAPLHH 151
>gi|332021040|gb|EGI61429.1| Methionyl-tRNA formyltransferase, mitochondrial [Acromyrmex
echinatior]
Length = 363
Score = 56.8 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 34/313 (10%)
Query: 4 RVVFMGTSEFAVATLQALVSS-------SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ 56
V+F GT+ F++ +L++L + +VSV +G K + V + A+
Sbjct: 54 NVLFFGTTNFSLESLRSLYNEYRAKKLCRLEVVSVC---------KGKK---NVVVQYAE 101
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
E + + + +VVA+G +IP I+N+ LG N H SLLPRW
Sbjct: 102 EKGIIVNEWPLKNNPQDFH-------IGIVVAFGHLIPLNIINSFPLGMLNVHNSLLPRW 154
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAP +M GD +TGI IM++ + DTG + K+ I ++ L +L+ L A+
Sbjct: 155 RGAAPDIYTLMKGDTQTGITIMRIAEKFDTGDIVTQEKIDIHADETRPELNMKLAKLGAN 214
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSA-ENVHNHIRALSPFPGA 235
+++ + KL Q PQ + G+TYA K++ + V + +NV++ RAL
Sbjct: 215 VLIDVIGKLPQVLSSSRPQEKLGVTYAPKVASRTSLVKWDEMTAKNVYDLQRALLGLYPL 274
Query: 236 WLEMMIGNKHERIKLLESQLVEGEG--KPG----EVINPNFTIACSQ-GAVRIMRLQRAG 288
+ S+ +G PG + + + C + ++ G
Sbjct: 275 KTKFEDVTIKLLDVRQTSKPEDGRNVDIPGFARFDRKSNALVVTCKGPSWISTTKVIVKG 334
Query: 289 GRVLDIGDFLLGC 301
V+ F G
Sbjct: 335 HSVMSALQFRNGF 347
>gi|6069504|dbj|BAA85457.1| S-locus protein 8 [Brassica rapa]
Length = 197
Score = 56.8 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK--------- 244
PQ ++ T A KI+ E ++F + A +HN +RA + +PG ++++ +
Sbjct: 69 PQDDSKATLAPKIAPDEAWLSFDQEAFVLHNKVRAFAGWPGTRAKVLVLDDKSGQQNELE 128
Query: 245 --HERIKLLES-QLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLLG 300
++ +S +++ GE + C G A+ ++ +Q G + +D F G
Sbjct: 129 LKIITTRICQSTEVLNGEQDYVTFKKGSLVFPCGGGTALEVLEVQLPGKKAIDATAFWNG 188
Query: 301 CPVIIGCIV 309
G +
Sbjct: 189 LR---GQKL 194
>gi|148978297|ref|ZP_01814802.1| methionyl-tRNA formyltransferase [Vibrionales bacterium SWAT-3]
gi|145962456|gb|EDK27734.1| methionyl-tRNA formyltransferase [Vibrionales bacterium SWAT-3]
Length = 47
Score = 56.4 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 267 NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP--VIIGCIV 309
+A QG + + +LQ G + + + D L +G +
Sbjct: 2 KTGIYVATGQGVLVLEQLQVPGKKAMSVQDILNSRASWFEVGTQL 46
>gi|164656433|ref|XP_001729344.1| hypothetical protein MGL_3379 [Malassezia globosa CBS 7966]
gi|159103235|gb|EDP42130.1| hypothetical protein MGL_3379 [Malassezia globosa CBS 7966]
Length = 290
Score = 56.0 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 52/275 (18%), Positives = 95/275 (34%), Gaps = 21/275 (7%)
Query: 49 SAVHKKAQEFSLPALVPTK-----LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKL 103
S V + A++ +P K + + + +
Sbjct: 4 SPVKQLAEQKHVPVSTVPKEGLEAFTLPPSICESKSPLLITASFGHRIPTSMLSHFPSTS 63
Query: 104 GFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNIN 162
N H S+LP RGAAP+Q AI +TGI + ++ H D G + V I ++
Sbjct: 64 LAINLHPSMLPDLRGAAPLQWAIARQYTQTGITVQQLHPTHFDRGGILKQVIVNIPTSCT 123
Query: 163 TAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENV 222
L +EL+ A +V+ + +L + + L PQ T A K++ +++ + +
Sbjct: 124 YPALVEELAPRGAELLVDVVARLPECHARLIPQDSTHATRAPKLAPRFSQIRWDAWNAAM 183
Query: 223 HNHIRALSPFPGAWLEMMIGNKHE----RIKLLESQL-------VEGEGKPGE---VINP 268
+ + +I + + E + + KPG+ V +
Sbjct: 184 IDARMRAFGYTQPLTTTLIPATSQFSPAPCIIHEGHVLLETPSEAKSLEKPGQGVYVSHG 243
Query: 269 NFT-IACSQGAVRIMRLQRAGGRVLDIGDFLLGCP 302
F G I R+Q G D+ G
Sbjct: 244 GFLAFKTISGMYGITRIQTRGKPARLSQDWWRGFR 278
>gi|73668453|ref|YP_304468.1| hypothetical protein Mbar_A0915 [Methanosarcina barkeri str.
Fusaro]
gi|72395615|gb|AAZ69888.1| hypothetical protein Mbar_A0915 [Methanosarcina barkeri str.
Fusaro]
Length = 318
Score = 56.0 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 63/303 (20%), Positives = 120/303 (39%), Gaps = 27/303 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVY----TQPP----RPAG------RRGLKSVL 48
+RV + T + ++++ S H +V + T+ P + G S
Sbjct: 1 MRVAII-TQGVS-NVFESVIESGHEVVGIVECSRTREPNSFLKAIGGAFTDVYYSFTSKP 58
Query: 49 SAVHKKAQEFSLPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYN 107
+ +++ +P K E +++++ D+ VV + ++ + I N KLG N
Sbjct: 59 LNLKTFSKKLEIPYYYLRKRDNEAFKKWMKHLQPDIIVVYSMSHLLKENIFNIPKLGTIN 118
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQ 167
H S LP +RG +PI G+ + ++K DTG + F ++ ISS +
Sbjct: 119 LHYSHLPEYRGPSPIFWEYYDYVLNPGVTLHYINKGEDTGDIIFQDRILISSGEKLEEVV 178
Query: 168 QELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETR---VNFCRSAENVHN 224
Q+LS+ +++ MD +E ++P Q T + K + +
Sbjct: 179 QKLSLTGIKFLLKTMDIIESGDVPRIKQSATTPTVRARKVKSNEYNELIKWDEWGVERVF 238
Query: 225 HIRALSPFPGAWL--EMMIGNKHERIKLLESQLVEGEG-KPGEVINPN---FTIACSQGA 278
H +P L + ++ IK+L + G K G++ N F + C G
Sbjct: 239 HFLNGTPKYHYTLLKKPILYKFGFTIKILSKEKCNISGYKIGKLYKENSKCFFV-CKNGK 297
Query: 279 VRI 281
+ I
Sbjct: 298 IYI 300
>gi|289806044|ref|ZP_06536673.1| methionyl-tRNA formyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
Length = 43
Score = 56.0 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 272 IACSQGAVRIMRLQRAGGRVLDIGDFLLGCP--VIIGCIV 309
+A +G + ++ LQ AG + + D L I G +
Sbjct: 3 VATGKGILNLLSLQPAGKKAMSAQDLLNSRREWFIPGNRL 42
>gi|330844088|ref|XP_003293969.1| hypothetical protein DICPUDRAFT_84478 [Dictyostelium purpureum]
gi|325075647|gb|EGC29509.1| hypothetical protein DICPUDRAFT_84478 [Dictyostelium purpureum]
Length = 400
Score = 56.0 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 63/361 (17%), Positives = 111/361 (30%), Gaps = 72/361 (19%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS---HSIVS---VYTQPPRPAGRRGLKSVLSAVHKKA 55
++F GT ++ L+AL + IV V + V +
Sbjct: 34 PYNILFFGTDNVSLPILKALNENKTTRGDIVKELQVVCPKSKKRE---------EVESYS 84
Query: 56 QEFSLPALVP-----TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
+ ++ P K Q + D+AVVV++G IP+ +L+ K G N H
Sbjct: 85 IQNNIKITHPDEEKGMKGFQVPTTESNQQPFDLAVVVSFGHFIPKSVLSQFKYGGLNMHP 144
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL 170
SLLPR RGAAPI I+ D E GI+I+++ + + + + Q
Sbjct: 145 SLLPRHRGAAPIYHTILKDDKEAGISIIELHPERFDCGKILSQVKLNNYDNSILYNQLLN 204
Query: 171 S-----VLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNH 225
++ N+ Q + + K N + +H
Sbjct: 205 QLSNLGTETLMETLQDFPNKSMNSFDQPEQGKTLASKVNKDISKVNWENSTQKEIWIHYR 264
Query: 226 IRALSPFPGAWLEMMIGNKHERIK---------LLESQLVEG------------------ 258
+ + + ++RIK + E+ +E
Sbjct: 265 AFSDNISLHGMIYNKKYKTNKRIKFRKMLPPLGIYEAHDLENKTIYQSLETDLESYYNRC 324
Query: 259 ----------------EGKPGEVINPNFTIACSQGAVRIMRLQRAGGR-VLDIGDFLLGC 301
+ KP + C G V L G + + +F+ G
Sbjct: 325 GGNSQIPFGTYFLETDKSKP---YSNILWTKCKDGWVGFTELYEEGKKNDVKAHEFIFGK 381
Query: 302 P 302
Sbjct: 382 N 382
>gi|153952116|ref|YP_001397588.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939562|gb|ABS44303.1| methionyl-tRNA formyltransferase [Campylobacter jejuni subsp.
doylei 269.97]
Length = 303
Score = 56.0 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 51/296 (17%), Positives = 113/296 (38%), Gaps = 23/296 (7%)
Query: 3 LRVVFMGTSEFAVATLQALV---SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
+R+ F+G +F+ L+ L+ + + +V + T + S + + +
Sbjct: 1 MRIFFIGCVQFSHFALKKLLSLQNENLQVVGIAT-----KEKSDFNSDFYDLKQ--DIKN 53
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP L + + +F+ V + ++ L H S LP RG
Sbjct: 54 LPCLHVKDINDAQSLKFIHSLKPDIVYCFGWSSLIKKEL-LNSYPIIGFHPSKLPYNRGR 112
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
PI A+ E+G + MDK DTG + + + ISS N L ++++ +
Sbjct: 113 HPIIWALFLNLKESGSSFFVMDKGADTGRILSQKSIKISSKDNAKSLYEKITQKALKQIE 172
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP------ 233
+ K+ + +L T + K +KG T + + +L+ +
Sbjct: 173 DFTLKIYKKSLKNKDFKSILHTLSYKQTKGNTWRKRDFKDGKIDFRMNSLAIYNLIRALA 232
Query: 234 GAWLEMMIGNKHERIKLLESQLVE---GEGKPGEVIN---PNFTIACSQGAVRIMR 283
++ + ++ K+ E+++V+ + G+++ + GA+ + +
Sbjct: 233 PPYIGAEVLYNNKIYKIYEAKIVKNSQNNLECGKILKVDQKGILVKSYDGAILLTK 288
>gi|116074492|ref|ZP_01471754.1| formyltransferase, putative [Synechococcus sp. RS9916]
gi|116069797|gb|EAU75549.1| formyltransferase, putative [Synechococcus sp. RS9916]
Length = 276
Score = 56.0 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 99/274 (36%), Gaps = 29/274 (10%)
Query: 48 LSAV-HKKAQEFSLPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGF 105
V +KA ++P L + + LS N D+ V +++ ++ + + + G
Sbjct: 19 PDPVLREKANFLNIPFLTHENVNSPAFTSLLSDINCDIFVSMSFNQILRPKTYSLPRFGT 78
Query: 106 YNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAG 165
N HA +LP +RG + A++ + GI + +D +DTG + + PI N + +
Sbjct: 79 INCHAGMLPYYRGRNILNWALINDEKSFGITVHYVDSGVDTGDIISQKSFPICDNDDYSS 138
Query: 166 LQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNH 225
L + C + A+ + PQ + + + +
Sbjct: 139 LLKVAYKECPPLLYGAILDICNCRADRIPQKTIHPHGSYFSQRVVGDEIIDWNQPSRSIF 198
Query: 226 IRAL---SPFPGAWLEMMIGNKHERIKLLESQLVEG----EGKPGEVI---NPNFTIACS 275
+P P A + K+ + +L++ + PG ++ + F + S
Sbjct: 199 NFVRALSTPGPNAQTFVGSNCI----KIAKVELIDTAPIYKCIPGAILAKDDNTFIVKTS 254
Query: 276 QGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+R+++ Q DF + G
Sbjct: 255 DSYLRLLQWQ---------CDF----KLAAGMRF 275
>gi|66818185|ref|XP_642752.1| hypothetical protein DDB_G0277347 [Dictyostelium discoideum AX4]
gi|60470888|gb|EAL68860.1| hypothetical protein DDB_G0277347 [Dictyostelium discoideum AX4]
Length = 425
Score = 55.7 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 99/279 (35%), Gaps = 27/279 (9%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS----HSIVS---VYTQPPRPAGRRGLKSVLSAVHKK 54
R++F GT ++ L++L + +++V V V +
Sbjct: 33 PYRILFFGTDNVSLPILKSLHENQKLKTNNLVKELQVICPKSEKKEL---------VEEY 83
Query: 55 AQEFSLPALVPTKLGQEEYEQF-----------LSFNADVAVVVAYGLVIPQRILNATKL 103
A E L P + + Q D+AVVV++G IP+ +L+ K
Sbjct: 84 AIENGLKITYPDAINGMKGFQVPKITTGESEQGNDELFDLAVVVSFGHFIPKSVLSKFKY 143
Query: 104 GFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINT 163
G N H SLLPR RGAAPI I++ D+ GI+++++ + + +
Sbjct: 144 GGINMHPSLLPRHRGAAPIYHQILSDDDNVGISVIELHHERFDCGKILKQIKLEPYDKDK 203
Query: 164 AGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVH 223
Q L+ L M ++ K +++ +
Sbjct: 204 ILYNQLLTNLVELGSECVMSTIQDFPESSKNAKNQTEQGKTLAPKVNRKMSKLEWSTQTI 263
Query: 224 NHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKP 262
N I L + + +++ K ++ V+ +P
Sbjct: 264 NEIWILYKAFSDNIGLNTMIYNKKSKSAKTIKVKEMLQP 302
Score = 35.6 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 270 FTIACSQGAVRIMRLQRAGGR-VLDIGDFLLGCP 302
+ C G + I +L G + + +FL G
Sbjct: 373 MWVNCKDGWIGITKLFEEGKKNTVKSSEFLFGKN 406
>gi|19114832|ref|NP_593920.1| methionyl-tRNA formyltransferase Fmt1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|21542066|sp|Q9UTG6|FMT_SCHPO RecName: Full=Putative methionyl-tRNA formyltransferase
gi|5912362|emb|CAB55850.1| methionyl-tRNA formyltransferase Fmt1 (predicted)
[Schizosaccharomyces pombe]
Length = 340
Score = 55.7 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 57/325 (17%), Positives = 118/325 (36%), Gaps = 34/325 (10%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L V+F+GT EF++ L+ L+ V V + + RRG + L +A L
Sbjct: 6 PLNVIFLGTDEFSIPILRKLI-GCVQRVRVVSAGGKRQSRRG-EIPLPPAAMEANANGLE 63
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ + + + +A+ ++G +P +ILN G N H SLLP++RGA P
Sbjct: 64 YIKLQDGWKNFHMRPDDQ---LAITASFGRFVPFKILNQLPYGGINIHPSLLPKYRGAGP 120
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDT-----GPVAFMRKVPISSNINTAGLQQELSVLCAH 176
+ I+ GD G+ I MD + + T L + + H
Sbjct: 121 VYSTILNGDRLAGVTIQTMDSKQFDKGKSLAQAYLKLNGKETYTLLTKILSLGAAGMLEH 180
Query: 177 AMVEAMDKLEQNNLPLSPQIE-------------NGITYAEKISKGETRVNFCRSAENVH 223
+++++ ++PQI + + S +
Sbjct: 181 VLLQSLYLPNCQTNTVAPQIHGRITDTGGLQLISKETFPSFQESWAKKITPEDAHVNFES 240
Query: 224 NHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEG-------KPGEV--INPN-FTIA 273
+ + + A+ + ++++ L + + KPGE + N +
Sbjct: 241 MNTQQIYNMSRAFNHVWCILNNKKVFLYDVHPLHSTSAEDWIHMKPGEFALLEKNLLLVK 300
Query: 274 CSQGAVRIM-RLQRAGGRVLDIGDF 297
+ I ++ + +++D ++
Sbjct: 301 TLDHVMVIKGGIRLSARKIVDPVEW 325
>gi|254503144|ref|ZP_05115295.1| Luciferase-like monooxygenase family [Labrenzia alexandrii DFL-11]
gi|222439215|gb|EEE45894.1| Luciferase-like monooxygenase family [Labrenzia alexandrii DFL-11]
Length = 1547
Score = 55.7 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 46/287 (16%), Positives = 91/287 (31%), Gaps = 27/287 (9%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
+ +G V + L H IV+V + P A+ A +
Sbjct: 5 LLIGDESLLVQCGEHLKDRGHRIVAVISSNP-------------AIRNWATSHGI---QA 48
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
+ G E F D +A ++P + ++G N H LPR+ G A
Sbjct: 49 AEWGNSLEETTAEFQFDWLFSIANLRMLPDTVWQRARVGAVNFHDGPLPRYAGLNAPAWA 108
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
I+ G+ G+ ++ D G + + IS + + L + + V+ + K+
Sbjct: 109 ILEGEQRFGVTWHEIVSGADKGKIYTQAEFDISPDETSLTLNAKCFEAGYASFVDLIAKV 168
Query: 186 EQNNLPLSPQIENGITYAEKISKGE-----TRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ N L Q + +Y K + + ++ + + +
Sbjct: 169 DSNTLNGISQDFSKRSYFGKNKRPTLSGTLDLSRTSQELSHLFRALSFGEGYANPLVAPK 228
Query: 241 IGNKHERIKLLE---SQLVEGEGKPGEVIN---PNFTIACSQGAVRI 281
+ K+ + + G G V+ IA V +
Sbjct: 229 VRTDRGLFKITKLDLAPPGTPNGPAGTVLKAGPDGVLIATGNQPVLL 275
>gi|295396525|ref|ZP_06806685.1| methionyl-tRNA formyltransferase [Brevibacterium mcbrellneri ATCC
49030]
gi|294970643|gb|EFG46558.1| methionyl-tRNA formyltransferase [Brevibacterium mcbrellneri ATCC
49030]
Length = 71
Score = 55.7 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 246 ERIKLLESQLVEGEGKPGEV--INPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+R KL + GE+ + I AV++ R+Q G ++D DF+ G
Sbjct: 4 KRTKLAGLSETDIHVPAGEIREHDGQILIGTGTTAVQVERIQPFGKPMMDAHDFVRGN 61
>gi|147780127|emb|CAN71122.1| hypothetical protein VITISV_004569 [Vitis vinifera]
Length = 382
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 16/132 (12%)
Query: 191 PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM-IGNKHERIK 249
PQ ++ T A KI+ E+ ++F + A +HN +RA + +PG +++ I +K+
Sbjct: 250 KAQPQDDSKATLAPKITPEESWLSFDQEASVLHNKVRAFAGWPGTRAKVVVIXDKNGEHN 309
Query: 250 LLESQLVE-----------GEGKPGEVINPNFTIAC-SQGAVRIMRLQRAGGRVLDIGDF 297
+L+ +++ E I C A+ ++ +Q G +V++ F
Sbjct: 310 VLDLKIITTRVCGQSNIQVNEADDVRFIKDALVFPCSGSSALEVLEVQLPGKKVVNAAAF 369
Query: 298 LLGCPVIIGCIV 309
G G +
Sbjct: 370 WNGLR---GQRL 378
>gi|68063758|ref|XP_673875.1| methionyl-tRNA formyltransferase [Plasmodium berghei strain ANKA]
gi|56492042|emb|CAI02383.1| methionyl-tRNA formyltransferase, putative [Plasmodium berghei]
Length = 487
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 80/189 (42%), Gaps = 8/189 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALV------SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
+ ++F+G++EF+ + ++ + I +V T+ P+ G R L S + + A
Sbjct: 73 KINLLFIGSNEFSSLCFKIILLIIKVLRNDIVIENVITKSPQKKG-RHLLINNSPIEEDA 131
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ + KL Y + V +++G + + Y H SLLP
Sbjct: 132 KQNKINVFYYDKLKNNIYLLKNKQFN-LGVSISFGEIFNTKFFKTINTNIYTLHPSLLPS 190
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
++GA+PIQR+++ ++ G I +D+G ++ +S+ N + +
Sbjct: 191 YKGASPIQRSLLNNESLFGYTIFLTKLKIDSGTSLIKKQFLFNSHFNFNDIITIMFTYGI 250
Query: 176 HAMVEAMDK 184
++ +
Sbjct: 251 LHFMKNIFF 259
>gi|193215850|ref|YP_001997049.1| formyl transferase domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193089327|gb|ACF14602.1| formyl transferase domain protein [Chloroherpeton thalassium ATCC
35110]
Length = 330
Score = 55.3 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 97/292 (33%), Gaps = 11/292 (3%)
Query: 1 MT-LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M ++V +G + L L+ ++ ++V V R R S + Q +
Sbjct: 1 MKDYKIVVIGAVKSTERILNGLLRNNINVVGVL-GLDRSVSR--KVSGYVDLGALCQVEN 57
Query: 60 LPAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+P E + + D V + ++ IL + G H + LP+ RG
Sbjct: 58 VPYKSFININDDENIKWVRNLKPDYMFAVGFSQLLKHDILAIPQFGTIGFHPTKLPKGRG 117
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
AP+ + + + M D+G + + + + +++++ +
Sbjct: 118 RAPL-AWLTYNAEDGAASFFLMTDGADSGDIFVQEPFTVDKDDHAFHVEEKILSAIDKGL 176
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + + PQ + +Y + + +++ + + IRA S
Sbjct: 177 DKWLPLFKDGRTKPVPQCDEQASYTGIRREIDGLIDWEEPGDMTYARIRAASKPHPGAYT 236
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRA 287
G K + G PG V+ + + +++ LQ
Sbjct: 237 FANGRKLLIWEAAMIDRCNFWGAPGRVLEDVADGYLVQAGDKVLKL--LQME 286
>gi|15291641|gb|AAK93089.1| LD21457p [Drosophila melanogaster]
Length = 220
Score = 54.9 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 12/206 (5%)
Query: 105 FYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKH-LDTGPVAFMRKVPISSNINT 163
N HASLLP+WRGAAPI AIM GD TG++IMK++ H D G + R+V I+ ++
Sbjct: 1 MINVHASLLPKWRGAAPIIYAIMKGDASTGVSIMKIEPHRFDIGDILAQREVAINPDVFM 60
Query: 164 AGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVH 223
L L+ L A +V+ ++ L PQ + ++YA KI+ T + +
Sbjct: 61 PDLHASLASLGAELLVDTINNLSVRLKEAKPQDSSRVSYAPKITSKITEIIWSE---LSA 117
Query: 224 NHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGE---GKPGEVI----NPNFTIACSQ 276
I + + ++++LLE +L E +PG + + + I C+Q
Sbjct: 118 IEIYTRHRALYGYKNLTTNFLGKQVQLLELRLPEKRVPVQEPGAISYLRKSRSLIIGCAQ 177
Query: 277 GA-VRIMRLQRAGGRVLDIGDFLLGC 301
+ + +++L+ G + + DF G
Sbjct: 178 QSQLEVLQLRVEGRKPMSAQDFNNGF 203
>gi|171463860|ref|YP_001797973.1| hypothetical protein Pnec_1216 [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171193398|gb|ACB44359.1| hypothetical protein Pnec_1216 [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 67
Score = 54.9 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSA 50
+RV +G+++F A L+A + +V+V+ P P + +A
Sbjct: 1 MRVALIGSADFGKAALEAFLDRGDEVVAVFCPPDNPKSSKPEVLKEAA 48
>gi|327283772|ref|XP_003226614.1| PREDICTED: methionyl-tRNA formyltransferase, mitochondrial-like
[Anolis carolinensis]
Length = 292
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 66/311 (21%), Positives = 113/311 (36%), Gaps = 79/311 (25%)
Query: 4 RVVFMGTSEFAVATLQAL----VSSSHSIVS---VYTQPPR-PAGRRGLKSVLSAVHKKA 55
RV+F GT FA L+AL + +V V T P + P G V A
Sbjct: 8 RVLFFGTDAFAGRALRALGGAREQTPCRVVDHLEVVTLPSKLPQGL--------PVKNIA 59
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ LP + +G ++ DV VV ++G ++ + ++ G N H S LPR
Sbjct: 60 EQLRLPIHLWPDIGPCDH-------FDVGVVASFGRLLSEELILKFPYGVLNVHPSYLPR 112
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
WRG API ++ GD TG IM++ D GP+ + + ++ + L+ LS L
Sbjct: 113 WRGPAPIIHTVLHGDQTTGATIMQIRPKRFDVGPIIKQESIAVPAHCSAKELESILSKLG 172
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
A ++ + L ++ + Q + G+T+ ++ E +
Sbjct: 173 AKLLIAVLQNLPESLQNMREQPKEGVTFDRITAEKEAIPGSVFYHKQ------------- 219
Query: 235 AWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAV----RIMRLQRAGGR 290
+ I+C +G V ++ +
Sbjct: 220 --------------------------------SETLVISCKEGWVGAKGVVL------KK 241
Query: 291 VLDIGDFLLGC 301
L DF G
Sbjct: 242 KLTAADFYNGY 252
>gi|320590415|gb|EFX02858.1| methionyl-tRNA formyltransferase family [Grosmannia clavigera
kw1407]
Length = 451
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 71/167 (42%), Gaps = 22/167 (13%)
Query: 2 TLRVVFMGTSEFAVATLQALVS---------SSH------SIVS--VYTQPPRPAGRRGL 44
LR++F G+ F+ A+L AL + H I S V +P + GR
Sbjct: 38 PLRILFCGSDAFSCASLGALHAEMQRQDGLPKDHRASLAGRIASLDVVVRPAKRTGRGLK 97
Query: 45 KSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLG 104
+ S V A E L + + ++ + V++GL +P RIL A + G
Sbjct: 98 QVADSPVRTMATELGLCVHERDTFTGWQP-----PSVNMIIAVSFGLFVPPRILGAARYG 152
Query: 105 FYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAF 151
N H SLLP GAAPI+ AI++G TG+ + +D
Sbjct: 153 GLNVHPSLLPDLPGAAPIEHAILSGRERTGVTVQTLDDKAFDEGHIL 199
>gi|215445593|ref|ZP_03432345.1| hypothetical protein MtubT_06489 [Mycobacterium tuberculosis T85]
Length = 41
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 7/34 (20%), Positives = 16/34 (47%)
Query: 270 FTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPV 303
I VR+ ++Q G ++++ D+ G +
Sbjct: 1 MWIGTGSEPVRLGQIQPPGKKLMNAADWARGARL 34
>gi|260574532|ref|ZP_05842536.1| amino acid adenylation domain protein [Rhodobacter sp. SW2]
gi|259023428|gb|EEW26720.1| amino acid adenylation domain protein [Rhodobacter sp. SW2]
Length = 1519
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/283 (17%), Positives = 89/283 (31%), Gaps = 24/283 (8%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
+ +G + + L++ HSI ++ ++ P V AQ L
Sbjct: 7 IVIGNESLTIQCAEVLLARGHSIAALVSRNP-------------EVQAWAQARGL---RQ 50
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
GQ ++ D + +A +IP+ +L A G N H LPR+ G A
Sbjct: 51 EAPGQGLADRLAGLRVDWLLSIANLSLIPEAVL-ALAKGAVNFHDGPLPRYAGLNAPVWA 109
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
I+ G+ GI + +D G + R I+ L + + + L
Sbjct: 110 ILNGEVRHGITWHLIAGGVDEGDILEQRLFDIAPTDTALTLNTKCFAAAIESFPALLTAL 169
Query: 186 EQNNLPLSPQIENGITYAEKISKGE----TRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
E Q + + + + + + I
Sbjct: 170 ETGAPKRQVQDLSQRHLYARADRPAAAGLIDFSVPAAKVVALVRALDHGSYFNPLSTAKI 229
Query: 242 GNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRI 281
+ + ++ G PG V+ +AC GAVR+
Sbjct: 230 RIGASVLHVGSAEAAAGTASPGTVLEATEAGLVVACGSGAVRL 272
>gi|120434915|ref|YP_860601.1| formyltransferase family protein [Gramella forsetii KT0803]
gi|117577065|emb|CAL65534.1| formyltransferase family protein [Gramella forsetii KT0803]
Length = 252
Score = 54.5 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/249 (16%), Positives = 92/249 (36%), Gaps = 14/249 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G + L+ L++ ++ + VYT P ++++ + ++ ++
Sbjct: 10 MRVVLCGYNWIGCKVLKELLNLNYEV-FVYTHENPPH--------INSLLQLCEKLNIN- 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
++ L F ++ + Y +I + ++ A +N H SLLP++RG + I
Sbjct: 60 ----CTTEKIALTNLPFKPNLICSIYYRYIIEENVIAAVDGKIFNLHPSLLPKYRGCSSI 115
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ + + G +D +D+G + +++ I L + A E +
Sbjct: 116 TWAMINNEKKVGFTFHYIDSGIDSGNIILQKEILIEEWDTQITLYHRIMFRAAEYFKEVI 175
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + + +S GE + P P A + I
Sbjct: 176 NAVLDGDKGISQNNSLEYYKRGCPFDGEINPEWSEDKIERFIRAMNYPPLPYATFKGYII 235
Query: 243 NKHERIKLL 251
KL+
Sbjct: 236 KSINDYKLI 244
>gi|262383291|ref|ZP_06076427.1| formyl transferase domain-containing protein [Bacteroides sp.
2_1_33B]
gi|262294189|gb|EEY82121.1| formyl transferase domain-containing protein [Bacteroides sp.
2_1_33B]
Length = 331
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 54/289 (18%), Positives = 112/289 (38%), Gaps = 16/289 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPP----RPAGRRGLKSVLSAVHKKAQEF 58
+RV +G+ ++ TLQ LV S ++V V+ P +G ++ + A++
Sbjct: 1 MRVGLIGSVGSSLLTLQKLVEYSFNVVGVWGYEPHSTLNVSGYCSMR-------RFAEDN 53
Query: 59 SLPALVPTKLGQEEYE-QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
L K+ + + Q + + D+ VV ++ + I+ +L H + LP+ R
Sbjct: 54 HLSYYPFIKINSNDIKEQIRNASVDILFVVGVSQLVDEDIIRLPRLACVGFHPTKLPKGR 113
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
G A ++ E K+D + D G + I + + + +L A
Sbjct: 114 GRA-PMAWLILDKGEGAATFFKIDTNADEGDIFVQEPFSIREDDDVTSIGVKLKEAMVRA 172
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ + L L PQ T+ + + + +++ +A+++ I+A +
Sbjct: 173 LDRWLPSLSSVGLKGIPQDGKAATFYARRAPLDGCIDWSNTAKDIDRLIKASTSPHPGAF 232
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMR 283
NK K +G G V+ N N + + G V +++
Sbjct: 233 SFYGNNKVLVWKSNYYASGYAKGVIGRVVNFNNDNPVVQTADGYVELVK 281
>gi|226330384|ref|ZP_03805902.1| hypothetical protein PROPEN_04302 [Proteus penneri ATCC 35198]
gi|225201179|gb|EEG83533.1| hypothetical protein PROPEN_04302 [Proteus penneri ATCC 35198]
Length = 89
Score = 54.1 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 4/86 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + + L+AL + + I +V+T P S+V + + E L
Sbjct: 1 MKAIVFAYHDIGCVGLKALEKAGYDIQAVFTHTDDPNENH----FFSSVARVSAEMGLTV 56
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVA 88
P + + + + +
Sbjct: 57 FAPENVNHPLWIERIREMKPDVIFFF 82
>gi|26325108|dbj|BAC26308.1| unnamed protein product [Mus musculus]
Length = 220
Score = 54.1 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 24/151 (15%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-------HSIVSVYTQPP-RPAGRRGLKSVLSAVHKKA 55
RV+F+GT FA TL+AL ++ + V T P P G V + A
Sbjct: 44 RVLFLGTDHFARETLRALHAARDGKEEKLIEKLEVVTVPSLSPKGL--------PVKQYA 95
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV VV ++G ++ + ++ G N H S LPR
Sbjct: 96 IQSQLPVY--------EWPDVGSGEYDVGVVASFGRLLSEALILKFPYGILNVHPSCLPR 147
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDT 146
WRG API ++ GD TG+ IM++
Sbjct: 148 WRGPAPIIHTVLHGDTVTGVTIMQIRPKRFD 178
>gi|162456254|ref|YP_001618621.1| hypothetical protein sce7971 [Sorangium cellulosum 'So ce 56']
gi|161166836|emb|CAN98141.1| fmt2 [Sorangium cellulosum 'So ce 56']
Length = 294
Score = 54.1 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 63/285 (22%), Positives = 103/285 (36%), Gaps = 19/285 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIV-SVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+RV F G A+ L H I + ++ RR + S +
Sbjct: 1 MRVAFFGLPLAAL----LLHGDGHEIALAAISRADAVGLRRARRLFGSRL---------- 46
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L P E + + D+ V + +P ++ A +LG H SLLPR RG P
Sbjct: 47 LLRPDVDRPELASRVEALAPDLLVSWFWTTRLPMSLVRAARLGGIGVHPSLLPRHRGPDP 106
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
AI +GD E+G+ ++ DTG + ++PI L + L +
Sbjct: 107 TYWAIASGDAESGVTAHRIAAEYDTGEILEQERLPIDPGWTAWQLARALDRPSLRVLRRT 166
Query: 182 MDKLEQNNLP-LSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + Q T A + + E V H+RAL+P PGAW E+
Sbjct: 167 VGRFARGEEVAGVAQDPALATQAPAPDDEACAICWSWPTERVLRHVRALAPAPGAWTEIE 226
Query: 241 IGNKHERIKLLESQLVEGEGKPGE-VINPNFT-IACSQGAVRIMR 283
++ + PGE V+ + AV ++
Sbjct: 227 GA-CVIVLRAAPAASFPEALAPGEAVVEGGVVLVRTGDTAVALLE 270
>gi|323486159|ref|ZP_08091488.1| hypothetical protein HMPREF9474_03239 [Clostridium symbiosum
WAL-14163]
gi|323400485|gb|EGA92854.1| hypothetical protein HMPREF9474_03239 [Clostridium symbiosum
WAL-14163]
Length = 315
Score = 54.1 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 52/296 (17%), Positives = 111/296 (37%), Gaps = 21/296 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKK---AQEFS 59
+R+V++G E + L+ ++S I ++ T + +K ++ H +
Sbjct: 1 MRIVWIGFHEEGIKALEGVLSERIKIHALIT-----LNQLKMKERSASTHAYRSICERNG 55
Query: 60 LPALVPTKLGQEEYEQFLSF-NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ + E L D+ +V+ + ++P R+L +G HA++LP RG
Sbjct: 56 ISYYEVDSIKSETAYNLLKNEKPDLVIVLGWSEILPARLLEIPSIGTVGTHAAMLPHNRG 115
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
+AP+ AI+ G+ G +M +++ +D+G + PI+ + ++S +
Sbjct: 116 SAPVNWAILRGETTGGNTLMWLNEKVDSGKMIEQISFPITIYDTCKTVYDKVSKTNDRMI 175
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSA--ENVHNHIRALSPFPGAW 236
+ +L + K + + + P+PGA+
Sbjct: 176 RNLIARLLTGEKVPGKILPELQEELLPRRKPKDGLICWEQPAKQIYDFVRALTEPYPGAF 235
Query: 237 LEMMIGNKHERIKLLESQLVEGEGKPGEVI---------NPNFTIACSQGAVRIMR 283
+ S++ +PGE+I + +ACS G + I
Sbjct: 236 SYLNGDKWMIWKCSFLSEIS-LMKRPGEIIGNIYSTEKYSGGIAVACSSGMICIHE 290
>gi|108760219|ref|YP_631013.1| non-ribosomal peptide synthetase [Myxococcus xanthus DK 1622]
gi|108464099|gb|ABF89284.1| non-ribosomal peptide synthetase [Myxococcus xanthus DK 1622]
Length = 1555
Score = 54.1 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 55/305 (18%), Positives = 94/305 (30%), Gaps = 36/305 (11%)
Query: 15 VATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYE 74
V QAL I+ + T+ P A+ K A+E +P G++
Sbjct: 20 VPCAQALTERGVRILGLVTREP-------------ALQKWAEEQGVP---HVPPGEQALP 63
Query: 75 QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETG 134
D + ++ IL + N H LPR+ G A++ + + G
Sbjct: 64 FLSQAPFDWLFSIVNLSMVKDEILRLPRRMAINFHDGPLPRYAGLNVTSWALLNREPQHG 123
Query: 135 IAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSP 194
+ +M K D G + R I+ L L E ++L
Sbjct: 124 VTWHEMTKGADEGRILKQRLFDIAPGETAFSLNARCYTLGMETFAELAEELVAGTSEAKE 183
Query: 195 QIENGITYAEKISKGETRVNFCRSAENVHNHI------RALSPFPGAWLEMMIGNKHERI 248
Q +Y + E + H P P ++ ++ +GN I
Sbjct: 184 QDFAQRSYFGLAQRPEAAGVVDLHGDVDVAHALVSALDYGGYPNPLSFAKVWLGNGPIAI 243
Query: 249 KLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVII 305
E PG V++ T+A G + + G L G P+
Sbjct: 244 SEARRAEPASESAPGTVLDIEGDALTVALQGGDLTLKG--PKG---------LCGAPLSW 292
Query: 306 GCIVG 310
++G
Sbjct: 293 ADVLG 297
>gi|85714621|ref|ZP_01045608.1| PbgP3 protein [Nitrobacter sp. Nb-311A]
gi|85698506|gb|EAQ36376.1| PbgP3 protein [Nitrobacter sp. Nb-311A]
Length = 301
Score = 54.1 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 57/259 (22%), Positives = 103/259 (39%), Gaps = 12/259 (4%)
Query: 49 SAVHK--KAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFY 106
SAV A+ ++P L L E SF A+ V + +I ++
Sbjct: 37 SAVKATAYAENNAIPILPRAMLMGREPFS-KSFRAEWLVNINGTTIIDPGVIRMFAGRAL 95
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H LLP++ G Q AI G++ G+ + MD +DTGP+ + +PI + L
Sbjct: 96 NMHPGLLPKYAGLHCHQWAIRNGESVQGLTVHVMDAGIDTGPIMAQQTIPIYDSDTGLSL 155
Query: 167 QQELSVLCAHAMVEA-MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNH 225
+ AH ++ + + P PQ + T + V++ SA + +
Sbjct: 156 FMRAMEMGAHLLIGVLTRIIANDIPPAVPQNLSQRTLYRHKDALDGEVDWNWSARRIRDF 215
Query: 226 IRALSPFPGAWLEM----MIGNKHERIKLLESQLVEGEGKPGEV--INPNFTIACSQG-A 278
+RA + P ++ +++ + +PG + ++ + I C G
Sbjct: 216 VRAANYDPLVCPTYVPTALVSGVPVVLRVCDVARPGEHIEPGVLREVDGSPVIGCGNGEV 275
Query: 279 VRIMRLQRAGGRVLDIGDF 297
V I R R G R++ D+
Sbjct: 276 VVIKRALRQG-RIMTGSDW 293
>gi|148694147|gb|EDL26094.1| mitochondrial methionyl-tRNA formyltransferase, isoform CRA_b [Mus
musculus]
Length = 229
Score = 53.7 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 24/151 (15%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-------HSIVSVYTQPP-RPAGRRGLKSVLSAVHKKA 55
RV+F+GT FA TL+AL ++ + V T P P G V + A
Sbjct: 53 RVLFLGTDHFARETLRALHAARDCKEEKLIEKLEVVTVPSLSPKGL--------PVKQYA 104
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP E+ S DV VV ++G ++ + ++ G N H S LPR
Sbjct: 105 IQSQLPVY--------EWPDVGSGEYDVGVVASFGRLLSEALILKFPYGILNVHPSCLPR 156
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDT 146
WRG API ++ GD TG+ IM++
Sbjct: 157 WRGPAPIIHTVLHGDTVTGVTIMQIRPKRFD 187
>gi|308198024|ref|XP_001387016.2| methionyl-tRNA transformylase [Scheffersomyces stipitis CBS 6054]
gi|149388992|gb|EAZ62993.2| methionyl-tRNA transformylase [Pichia stipitis CBS 6054]
Length = 348
Score = 53.7 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 60/318 (18%), Positives = 108/318 (33%), Gaps = 33/318 (10%)
Query: 2 TLRVVFMGTSEFAVATLQAL----VSSSHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
L + F G+ F+V +L L + I S V T+ +P GR V +
Sbjct: 1 PLNIAFFGSDSFSVQSLDRLYRYKLQHPERISSIKVVTRTIKPTGRNLKAYVDLPIGDYC 60
Query: 56 QE-----FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
++ S+P L ++ S +A+ V+YG +IP + L + + G N H
Sbjct: 61 KKLEESLNSIPVL-RADSTEDILSILNSNTFSLAIAVSYGKLIPAKFLESCEFGGLNVHP 119
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQE 169
SLLP++ G++PIQ ++ D G + + D G + K SN + Q
Sbjct: 120 SLLPKYSGSSPIQYTLLNDDRTAGCTVQTLHPTKFDQGNIILQSKEIPVSNKDNFESLQI 179
Query: 170 LSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL 229
++ + SP + + YA ++ + +
Sbjct: 180 RLGAIGSDLLVQVIDEGLFMENCSPHLRSENKYAFSLAPKIRPSSSEIKWSIKSSLQIKR 239
Query: 230 SPFPGAWLEMMIGNKHERIK---------------LLESQLVEGEGKPGEVI-----NPN 269
L +R K +++ KPG+ NP
Sbjct: 240 MEDALGPLHSYKFVNLKRKKKVIQENQRVILSDIEVIKCGYYPSISKPGQFCLEDSSNPR 299
Query: 270 FTIACSQGAVRIMRLQRA 287
I G + + +L+
Sbjct: 300 LIIKTVDGHIGVRKLKFQ 317
>gi|307198046|gb|EFN79099.1| Methionyl-tRNA formyltransferase, mitochondrial [Harpegnathos
saltator]
Length = 317
Score = 53.7 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 107/275 (38%), Gaps = 32/275 (11%)
Query: 4 RVVFMGTSEFAVATLQALVSS-------SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ 56
RV+F GT FA+ +L++L + +VSVY K + + K A+
Sbjct: 54 RVLFFGTDNFALESLRSLYNEYRTKKLLRLEVVSVY------------KKKTNPIIKYAE 101
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
E + + + +VV++G +IP I+ + G N HASLLPRW
Sbjct: 102 EKKIVVNRWPLENNPQDFH-------IGIVVSFGHLIPLNIIKSFPFGMINVHASLLPRW 154
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RGAAPI +++ GD ETGI IMK+ ++ T
Sbjct: 155 RGAAPIIYSLINGDTETGITIMKIMPEKFDIGEIIAQERTDIHADETLPEVYAKLAKIGA 214
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL----SPF 232
++ + + L PQ GITYA K++ + V + + P
Sbjct: 215 DVLVDVVRKLPEISSLRPQERIGITYAPKVTSKISLVKWDEMTAKNVYDLHRGLLELYPL 274
Query: 233 PGAW--LEMMIGNKHERIKLLESQLVEGEGKPGEV 265
+ + + + + K + E + PG++
Sbjct: 275 TTKFGDTVIKLFDVRQVSKSTDGTNPEDDDVPGDI 309
>gi|198415854|ref|XP_002129796.1| PREDICTED: similar to mitochondrial methionyl-tRNA
formyltransferase isoform 2 [Ciona intestinalis]
Length = 285
Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 66/270 (24%), Positives = 110/270 (40%), Gaps = 22/270 (8%)
Query: 45 KSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLG 104
K S VH+ A +P D+ VVV++G ++PQRI+++ LG
Sbjct: 7 KIRKSVVHEFATNHQIPIYYWGNFEFG-------GEFDLGVVVSFGKMMPQRIIDSFSLG 59
Query: 105 FYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKM--DKHLDTGPVAFMRKVPISSNIN 162
N H SLLP+ RG++P+ RAI G TG++I ++ D +++ V I ++N
Sbjct: 60 MLNVHGSLLPQLRGSSPVSRAIQGGITSTGVSIFQIKSDGFDHGKILSYSSPVVIDDHVN 119
Query: 163 TAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENV 222
+ L Q+L+ + A +E + + Q I+YA KI+ ET +N+
Sbjct: 120 SDELTQKLAYIGADLCLEVLWNFPERIANAKEQDRKLISYAPKINVQETFINWESMTPET 179
Query: 223 HNHIRALSPFPGAWLEMMIGNKHER-------IKLLESQLVEGEGKPGEVI----NPNFT 271
+ + N + ++ V G PG V +
Sbjct: 180 ILKNFRAFGYQKDYFLRCEYNGQMIKFLQLSSCTVEQTAFVSGNCPPGMVSYHKPSKTLL 239
Query: 272 IACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+ C G V +L G++L DF G
Sbjct: 240 VKCCSGHVACTKLLY--GKILSSADFYNGF 267
>gi|323483114|ref|ZP_08088506.1| methionyl-tRNA formyltransferase [Clostridium symbiosum WAL-14163]
gi|323403534|gb|EGA95840.1| methionyl-tRNA formyltransferase [Clostridium symbiosum WAL-14163]
Length = 274
Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 53/273 (19%), Positives = 116/273 (42%), Gaps = 12/273 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M ++ F+ + ++ ++ + S + V T A ++ + L + A++ +
Sbjct: 1 MGTKIGFVTCVQLGLSCIEKIYSMEGQLDIVITLKDEKAQKKSGRIFLD---EFAEDHDI 57
Query: 61 PALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
P L + ++ E+ + D ++ + + + ILNA + G H +LLP+ RG
Sbjct: 58 PLLKINNINEDIVEKTIKEKELDWLFIIGWSQIAKKNILNAPRRGCIGMHPTLLPQGRGR 117
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
A I AI+ G ETG+ + ++D+ DTG + + +S I L +++ +
Sbjct: 118 ASIPWAILKGLKETGVTLFRLDEGTDTGDIIGQEVISLSDKITATELYNKVNEAHITLLE 177
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRS-AENVHNHIRALSPFPGAWLE 238
+ + + ++ + L Q E T+ E + + + E + P+PGA+
Sbjct: 178 QFWNGIVEDKISLKKQNEREATFWEGRRPEDGEIYKDMALEEALTLIRAVTKPYPGAFYT 237
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGEVINPNFT 271
M E+ + ++ + G P ++ F
Sbjct: 238 MED----EKWIIWSARGSDTNGLP---VSDGFI 263
>gi|259144833|emb|CAY77772.1| Fmt1p [Saccharomyces cerevisiae EC1118]
gi|323338810|gb|EGA80025.1| Fmt1p [Saccharomyces cerevisiae Vin13]
Length = 401
Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 63/363 (17%), Positives = 105/363 (28%), Gaps = 61/363 (16%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-------SSH-SIVSVYTQPPRPAGRRGLKSVLSAVHK 53
L V+F G+ F+ +LQAL S + V T+ P+ GR+ +
Sbjct: 29 PLNVLFFGSDTFSNFSLQALNELRQNNGSSGIVDNIQVVTRSPKWCGRQKSILKYPPIFD 88
Query: 54 KAQEFSLPALVPTKLGQEE-------YEQFLSFNADVAVVVAYGLVIPQR------ILNA 100
A++ LP + QE + + D + ++ L
Sbjct: 89 MAEKLQLPRPITCDTKQEMLALSKLTPSRQENPENDGSSAPFNAIIAVSFGKLIPGDLIR 148
Query: 101 TKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP---- 156
N H SLLPR +G+APIQRA++ GD TG+ I + + P
Sbjct: 149 AVPLALNVHPSLLPRHKGSAPIQRALLEGDTYTGVTIQTLHPDRFDHGAIVAQTEPLAIA 208
Query: 157 ------------ISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAE 204
N + + + A+ + PQ A
Sbjct: 209 TMLSKGRVNDSTADFNSEGLPRRTAILMDQLGALGAQLLGQTLRERLYLPQNRVQAPTAY 268
Query: 205 KISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK-----------------HER 247
K S + + L + +
Sbjct: 269 KPSYAHRITTEDKRIHWARDSAAELLNKLETLGPLHAFKEATAARKDAQNSVLKRILFHE 328
Query: 248 IKLLESQLVEGEGKPGEV----INPNFTIACSQGAVR-IMRLQRAGGRVLDIGDFLLGCP 302
K++ ++ KPG I + C + + RLQ G V G F+
Sbjct: 329 CKVMRDARLDNGSKPGMFKYDDIKDCILVTCRGNLLLCVSRLQFEGFAVERAGQFM--AR 386
Query: 303 VII 305
+
Sbjct: 387 LRK 389
>gi|82539113|ref|XP_723970.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23478450|gb|EAA15535.1| methionyl-tRNA formyltransferase homolog, putative [Plasmodium
yoelii yoelii]
Length = 655
Score = 53.3 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 80/189 (42%), Gaps = 8/189 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALV------SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
+ ++F+G++EF+ + ++ + I +V T+ P+ G R L S + + A
Sbjct: 241 KINLLFIGSNEFSSLCFKIILLIIKVLRNDIVIENVITKSPQKKG-RHLLINTSPIEEDA 299
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ + KL Y + V +++G + + Y H SLLP
Sbjct: 300 KKNKINVFYYDKLKNNIYLLKNKQFN-LGVSISFGEIFNTKFFKTINTNIYTLHPSLLPS 358
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
++GA+PIQR+++ ++ G I +D+G ++ +S+ N + L
Sbjct: 359 YKGASPIQRSLLNNESLFGYTIFLTKLKIDSGTSLIKKQFLFNSHFNFNDIITILFTYGT 418
Query: 176 HAMVEAMDK 184
++ +
Sbjct: 419 LHFMKNIFF 427
>gi|190408839|gb|EDV12104.1| methionyl-tRNA transformylase [Saccharomyces cerevisiae RM11-1a]
gi|207347820|gb|EDZ73878.1| YBL013Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323334495|gb|EGA75869.1| Fmt1p [Saccharomyces cerevisiae AWRI796]
gi|323356271|gb|EGA88075.1| Fmt1p [Saccharomyces cerevisiae VL3]
Length = 401
Score = 53.3 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 63/363 (17%), Positives = 105/363 (28%), Gaps = 61/363 (16%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-------SSH-SIVSVYTQPPRPAGRRGLKSVLSAVHK 53
L V+F G+ F+ +LQAL S + V T+ P+ GR+ +
Sbjct: 29 PLNVLFFGSDTFSNFSLQALNELRQNNGSSGIVDNIQVVTRSPKWCGRQKSILKYPPIFD 88
Query: 54 KAQEFSLPALVPTKLGQEE-------YEQFLSFNADVAVVVAYGLVIPQR------ILNA 100
A++ LP + QE + + D + ++ L
Sbjct: 89 MAEKLQLPRPITCDTKQEMLALSKLTPSRQENPENDGSGAPFNAIIAVSFGKLIPGDLIR 148
Query: 101 TKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP---- 156
N H SLLPR +G+APIQRA++ GD TG+ I + + P
Sbjct: 149 AVPLALNVHPSLLPRHKGSAPIQRALLEGDTYTGVTIQTLHPDRFDHGAIVAQTEPLAIA 208
Query: 157 ------------ISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAE 204
N + + + A+ + PQ A
Sbjct: 209 TMLSKGRVNDSTADFNSEGLPRRTAILMDQLGALGAQLLGQTLRERLYLPQNRVQAPTAY 268
Query: 205 KISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK-----------------HER 247
K S + + L + +
Sbjct: 269 KPSYAHRITTEDKRIHWARDSAAELLNKLETLGPLHAFKEATAARKDAQNSVLKRILFHE 328
Query: 248 IKLLESQLVEGEGKPGEV----INPNFTIACSQGAVR-IMRLQRAGGRVLDIGDFLLGCP 302
K++ ++ KPG I + C + + RLQ G V G F+
Sbjct: 329 CKVMRDARLDNGSKPGMFKYDDIKDCILVTCRGNLLLCVSRLQFEGFAVERAGQFM--AR 386
Query: 303 VII 305
+
Sbjct: 387 LRK 389
>gi|224062784|ref|XP_002198028.1| PREDICTED: mitochondrial methionyl-tRNA formyltransferase
[Taeniopygia guttata]
Length = 382
Score = 53.3 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 32/294 (10%)
Query: 24 SSHSIVS---VYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFN 80
S HS+VS V T P R G V A+E LP G +
Sbjct: 63 SEHSLVSRLEVVTLPSRLPGD-------LPVRSCARELQLPVHEWPHTGP-------AGQ 108
Query: 81 ADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKM 140
DV VV ++G ++ + ++ G N H S LPRWRG API ++ GD TG+ IM++
Sbjct: 109 FDVGVVASFGRLLSEELILQFPYGVLNVHPSCLPRWRGPAPIVHTVLHGDKVTGVTIMEI 168
Query: 141 DK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENG 199
D GP+ +V + L+ L+ + A ++ + L ++ Q + G
Sbjct: 169 RPKRFDVGPIIKQEEVAVPPRCTAQELEGMLAKMGASMLLAVLKNLPESLKNKKEQPKEG 228
Query: 200 ITYAEKISKGETRVNFCRS----AENVHNHIRALSP----FPGAWLEMMIGNKHERIKLL 251
+T+A KIS ++ + + +H I ++ P + G ++++ + + LL
Sbjct: 229 VTFAPKISIAKSCIKWEEQTAAQIIQLHRAIGSMFPLQTLWKGTAIKLLDFVEDDPSLLL 288
Query: 252 ESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+ + E PG V+ + C +G I + + L DF G
Sbjct: 289 DQIQKDCEVVPGSVLFHKKSQTLMARCKEGWAGIKTVIL--KKKLTAVDFYNGY 340
>gi|315637908|ref|ZP_07893095.1| conserved hypothetical protein [Campylobacter upsaliensis JV21]
gi|315482020|gb|EFU72637.1| conserved hypothetical protein [Campylobacter upsaliensis JV21]
Length = 596
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 12/238 (5%)
Query: 52 HKKAQEFSLPALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
K A++F LP V + E+ E+ SF D+ V +++ + RIL + + N HA
Sbjct: 15 QKLARKFDLPCFVCEDINDEKSLEKIASFEPDLLVSMSFDQIFKGRILKSYEGKIINCHA 74
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL 170
S LP +RG + ++ + E G+++ +D +DTG + + IS + + L +
Sbjct: 75 SKLPFYRGRNNLNWILINDEKEFGVSVHFVDSGVDTGDIILQKSFSISDEDDYSTLLKRA 134
Query: 171 SVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
CA + EA+ + Q + R N + A
Sbjct: 135 YKACAFLLYEAVLLFLNPPVKSYSQAGFVCKKRGSGDERIDWTLSTRELFNFIRALNA-- 192
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMR 283
P GA + IKL +S++++ E G GE++ + F + GA++I++
Sbjct: 193 PNLGASAFI----NGVLIKLYKSEILKQEFKGAIGEIVSVSDEGFIVCTKDGALKIIK 246
>gi|256273181|gb|EEU08130.1| Fmt1p [Saccharomyces cerevisiae JAY291]
Length = 401
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 63/363 (17%), Positives = 105/363 (28%), Gaps = 61/363 (16%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-------SSH-SIVSVYTQPPRPAGRRGLKSVLSAVHK 53
L V+F G+ F+ +LQAL S + V T+ P+ GR+ +
Sbjct: 29 PLNVLFFGSDTFSNFSLQALNELRQNNGSSGIVDNIQVVTRSPKWCGRQKSILKYPPIFD 88
Query: 54 KAQEFSLPALVPTKLGQEE-------YEQFLSFNADVAVVVAYGLVIPQR------ILNA 100
A++ LP + QE + + D + ++ L
Sbjct: 89 MAEKLQLPRPITCDTKQEMLALSKLTPSRQENPENDGSGAPFNAIIAVSFGKLIPGDLIR 148
Query: 101 TKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP---- 156
N H SLLPR +G+APIQRA++ GD TG+ I + + P
Sbjct: 149 AVPLALNVHPSLLPRHKGSAPIQRALLEGDTYTGVTIQTLHPDRFDHGAIVAQTEPLAIA 208
Query: 157 ------------ISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAE 204
N + + + A+ + PQ A
Sbjct: 209 TMLSKGRVNDSTADFNSEGLPRRTAILMDQLGALGAQLLGRTLRERLYLPQNRVQAPTAY 268
Query: 205 KISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK-----------------HER 247
K S + + L + +
Sbjct: 269 KPSYAHRITTEDKRIHWARDSAAELLNKLETLGPLHAFKEATAARKDAQNSVLKRILFHE 328
Query: 248 IKLLESQLVEGEGKPGEV----INPNFTIACSQGAVR-IMRLQRAGGRVLDIGDFLLGCP 302
K++ ++ KPG I + C + + RLQ G V G F+
Sbjct: 329 CKVMRDARLDNGSKPGMFKYDDIKDCILVTCRGNLLLCVSRLQFEGFAVERAGQFM--AR 386
Query: 303 VII 305
+
Sbjct: 387 LRK 389
>gi|151946382|gb|EDN64604.1| methionyl-tRNA transformylase [Saccharomyces cerevisiae YJM789]
Length = 401
Score = 53.0 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 63/363 (17%), Positives = 105/363 (28%), Gaps = 61/363 (16%)
Query: 2 TLRVVFMGTSEFAVATLQALVS-------SSH-SIVSVYTQPPRPAGRRGLKSVLSAVHK 53
L V+F G+ F+ +LQAL S + V T+ P+ GR+ +
Sbjct: 29 PLNVLFFGSDTFSNFSLQALNELRQNNGSSGIVDNIQVVTRSPKWCGRQKSILKYPPIFD 88
Query: 54 KAQEFSLPALVPTKLGQEE-------YEQFLSFNADVAVVVAYGLVIPQR------ILNA 100
A++ LP + QE + + D + ++ L
Sbjct: 89 MAEKLQLPRPITCDTKQEMLALSKLTPSRQGNPENDGSGAPFNAIIAVSFGKLIPGDLIR 148
Query: 101 TKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP---- 156
N H SLLPR +G+APIQRA++ GD TG+ I + + P
Sbjct: 149 AVPLALNVHPSLLPRHKGSAPIQRALLEGDTYTGVTIQTLHPDRFDHGAIVAQTEPLAIA 208
Query: 157 ------------ISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAE 204
N + + + A+ + PQ A
Sbjct: 209 TMLSKGRVNDSTADFNSEGLPRRTAILMDQLGALGAQLLGQTLRERLYLPQNRVQAPTAY 268
Query: 205 KISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK-----------------HER 247
K S + + L + +
Sbjct: 269 KPSYAHRITTEDKRIHWARDSAAELLNKLETLGPLHAFKEATAARKDAQNSVLKRILFHE 328
Query: 248 IKLLESQLVEGEGKPGEV----INPNFTIACSQGAVR-IMRLQRAGGRVLDIGDFLLGCP 302
K++ ++ KPG I + C + + RLQ G V G F+
Sbjct: 329 CKVMRDARLDNGSKPGMFKYDDIKDCILVTCRGNLLLCVSRLQFEGFAVERAGQFM--AR 386
Query: 303 VII 305
+
Sbjct: 387 LRK 389
>gi|167581656|ref|ZP_02374530.1| hypothetical protein BthaT_26164 [Burkholderia thailandensis TXDOH]
Length = 251
Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 55/232 (23%), Positives = 93/232 (40%), Gaps = 5/232 (2%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M R V V LQ L++ + V T P +V A E ++
Sbjct: 1 MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDSPTEN----IWFGSVAAVAAEHAI 56
Query: 61 PALVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P + ++ D Y ++P +L G YN H SLLP++RG
Sbjct: 57 ACITPADPTSADVRAAVAGAKPDFIFSFYYRHMLPVDLLALAARGAYNMHGSLLPKYRGR 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
P A++ G+ ETG + +M D G + VPI + A + +++V +
Sbjct: 117 VPTNWAVLNGETETGATLHEMAAKPDAGAIVGQTAVPILPDDTAAQVFDKVTVAAEQTLW 176
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
+ L P P + +Y + R+++ R A +V+N IRA++P
Sbjct: 177 RVLPALLAGEAPHLPNDLSQGSYYGGRKPEDGRIDWSRPAASVYNLIRAVAP 228
>gi|255067317|ref|ZP_05319172.1| putative methionyl-tRNA formyltransferase [Neisseria sicca ATCC
29256]
gi|255048468|gb|EET43932.1| putative methionyl-tRNA formyltransferase [Neisseria sicca ATCC
29256]
Length = 260
Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 52/263 (19%), Positives = 90/263 (34%), Gaps = 14/263 (5%)
Query: 1 MTLRVVFMGTSEFAVATLQAL-VSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
MT +++FMG + L+ L + IV V T S A+E
Sbjct: 1 MT-KILFMGRKRLSANLLRLLSSQNGIEIVGVLT---------DSHLQGSPTAAAAKELG 50
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP + E L D+ + V Y + L +LG N H +LLP ++G
Sbjct: 51 LPLYTFDTALEAMKEGRLK--YDLGLSVLYWRKLRDEFLTVPRLGTINFHPALLPEYKGT 108
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AIM +E G +D +DTG + + + PI S++ TA + ++
Sbjct: 109 GGYNLAIMDELSEWGSTAHYVDASIDTGEIIEVDRFPIDSSVETAQSLERKTMQALEPFA 168
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS-PFPGAWLE 238
+ + P N + E + P+ GA++E
Sbjct: 169 QRIIARAVEAQAKLPTTPNIGGRYVSRDEMEAMKQIRDGDDVEKKIRAFWFPPYDGAYVE 228
Query: 239 MMIGNKHERIKLLESQLVEGEGK 261
+ + L ++ +
Sbjct: 229 IDGQKYTLINRQLLEEVAPKDST 251
>gi|255715041|ref|XP_002553802.1| KLTH0E07414p [Lachancea thermotolerans]
gi|238935184|emb|CAR23365.1| KLTH0E07414p [Lachancea thermotolerans]
Length = 377
Score = 53.0 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/342 (15%), Positives = 106/342 (30%), Gaps = 38/342 (11%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVS------VYTQPPRPAGRRGLKSVLSAVHKKAQ 56
L V+F G+ F+V +L AL V +P + GR ++ + + K +
Sbjct: 25 LNVLFFGSDRFSVHSLHALRQLREENPGLIHKLQVVARPAKKCGRNLSETREAPIVKASS 84
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQ---RILNATKLGFYNGHASLL 113
+ LP + +E + + + + + L A N H SLL
Sbjct: 85 QIGLPPPINCDSTKEMLGPVMKTIKEGGFNMIIAVSFGKLISHELIAQVPYTLNVHPSLL 144
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
P+++G++PIQ ++ GD TG++I + + P+ + +
Sbjct: 145 PQYKGSSPIQHTLLNGDEYTGVSIQTLHPEKFDHGNIIAQTAPLKVSKLLEMQACQYETD 204
Query: 174 CAHA------------------MVEAMDKLEQNNLPLSPQIENGI--TYAEKISKGETRV 213
+ D+L + N SPQ + + + +
Sbjct: 205 PTIPPKVARLMDSLGSVGGRLLVHVLQDRLYETNHVASPQYPASYAPKITTSMRQVQWQS 264
Query: 214 NFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLV----EGEGKPGEVI--- 266
+ A + + L F + + +R+ GE
Sbjct: 265 DSSCRALRKFDSLGPLYSFKQVYKKNSQVPHFKRVIFHHLAPAFDCDTSSRTSGEFEFDF 324
Query: 267 -NPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLLGCPVIIG 306
I G ++ +Q G ++ F+ G
Sbjct: 325 AQNCLLIPFVDGKFLKCTSIQFEGHKIETPDQFMKSLRKRCG 366
>gi|91076878|ref|XP_974995.1| PREDICTED: similar to mitochondrial methionyl-tRNA
formyltransferase [Tribolium castaneum]
gi|270001958|gb|EEZ98405.1| hypothetical protein TcasGA2_TC000873 [Tribolium castaneum]
Length = 340
Score = 52.6 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 70/280 (25%), Positives = 117/280 (41%), Gaps = 18/280 (6%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+V+F G +F++ +L+ L + + ++ ++ +G +AV A + +L
Sbjct: 34 KVLFFGADDFSLFSLKKL-NEEYRKKALLSRLEVVTTVKGK---ANAVKLYADKENLQLH 89
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
DV +VV++G +IP+ I++ LG N HAS+LPRWRGAAPI
Sbjct: 90 KWPPCIGF-------GEFDVGIVVSFGHLIPKAIIDQFPLGMLNVHASILPRWRGAAPII 142
Query: 124 RAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A+ GD ETG+ IM + D G + VPI + + L L L A +++ +
Sbjct: 143 YALANGDTETGVTIMTISPEKFDIGKIVLQESVPIHPEMTQSKLFATLGKLGAAQLIKTL 202
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
L N PQ GITYA K+ + + + ++ G
Sbjct: 203 ADLSSNLNNAKPQPTEGITYAPKVKPTFASIKWDQMTAEQIYNLGRALEGIFPIQTTWKG 262
Query: 243 NKHERIKLLESQLVEGEG--KPGEV----INPNFTIACSQ 276
+ I + + + + KPG V + CS
Sbjct: 263 MPVKLIGIKKGDYLNSDKSIKPGYVGYDKEKNALKVLCSD 302
>gi|41629674|ref|NP_009540.2| Fmt1p [Saccharomyces cerevisiae S288c]
gi|88984180|sp|P32785|FMT_YEAST RecName: Full=Methionyl-tRNA formyltransferase, mitochondrial;
Short=MtFMT; Flags: Precursor
gi|40457276|gb|AAR86694.1| mitochondrial formyl-methionyl-tRNA transformylase [Saccharomyces
cerevisiae]
gi|40457278|gb|AAR86695.1| mitochondrial formyl-methionyl-tRNA transformylase [Saccharomyces
cerevisiae]
gi|285810322|tpg|DAA07107.1| TPA: Fmt1p [Saccharomyces cerevisiae S288c]
Length = 401
Score = 52.6 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 64/363 (17%), Positives = 106/363 (29%), Gaps = 61/363 (16%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHS-----IVS---VYTQPPRPAGRRGLKSVLSAVHK 53
L V+F G+ F+ +LQAL + IV V T+ P+ GR+ +
Sbjct: 29 PLNVLFFGSDTFSNFSLQALNELRQNNGSCGIVDNIQVVTRSPKWCGRQKSILKYPPIFD 88
Query: 54 KAQEFSLPALVPTKLGQEE-------YEQFLSFNADVAVVVAYGLVIPQR------ILNA 100
A++ LP + QE + + D + ++ L
Sbjct: 89 MAEKLQLPRPITCDTKQEMLALSKLTPSRQGNPENDGSGAPFNAIIAVSFGKLIPGDLIR 148
Query: 101 TKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP---- 156
N H SLLPR +G+APIQRA++ GD TG+ I + + P
Sbjct: 149 AVPLALNVHPSLLPRHKGSAPIQRALLEGDTYTGVTIQTLHPDRFDHGAIVAQTEPLAIA 208
Query: 157 ------------ISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAE 204
N + + + A+ + PQ A
Sbjct: 209 TMLSKGRVNDSTADFNSEGLPRRTAILMDQLGALGAQLLGQTLRERLYLPQNRVQAPTAY 268
Query: 205 KISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK-----------------HER 247
K S + + L + +
Sbjct: 269 KPSYAHRITTEDKRIHWARDSAAELLNKLETLGPLHAFKEATAARKDAQNSVLKRILFHE 328
Query: 248 IKLLESQLVEGEGKPGEV----INPNFTIACSQGAVR-IMRLQRAGGRVLDIGDFLLGCP 302
K++ ++ KPG I + C + + RLQ G V G F+
Sbjct: 329 CKVMRDARLDNGSKPGMFKYDDIKDCILVTCRGNLLLCVSRLQFEGFAVERAGQFM--AR 386
Query: 303 VII 305
+
Sbjct: 387 LRK 389
>gi|119383590|ref|YP_914646.1| amino acid adenylation domain-containing protein [Paracoccus
denitrificans PD1222]
gi|119373357|gb|ABL68950.1| amino acid adenylation domain [Paracoccus denitrificans PD1222]
Length = 1541
Score = 52.6 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 54/291 (18%), Positives = 95/291 (32%), Gaps = 29/291 (9%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
+ +G + L++ H I +V T+ P + AQ L
Sbjct: 7 ILVGNESLLRHAAETLLARGHRIAAVVTRNPD-------------LRDWAQGAGLAV--- 50
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
Q+ + +AD VA ++ +L +LG N H LP+ G A
Sbjct: 51 --EDQDAPMAPDALSADWLFSVANLSILRPEMLARGRLGAINFHDGPLPKLAGLNAPVWA 108
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
I+ + + GI ++ +D G + R I + L A + + + +L
Sbjct: 109 IIGDEPQHGITWHMIEGGVDEGDILTQRLFEIRPDDTALTLNARCFARGAESFADVVAQL 168
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS-PFPGAWLEMMIGNK 244
E Q + +Y + + E + G W + +
Sbjct: 169 EGAGPQRVRQDLSLRSYVGRDKRPEAAAVLDFTQPAARIGALVRGLDHGGYWNPLAMPKV 228
Query: 245 HERIKLLESQ----LVEGEGKPGEVINPN---FTIACSQGAVRIMRLQRAG 288
+L + PG V++ + IA + GAVR LQ AG
Sbjct: 229 KLADSVLLVTGFEGVEPASAPPGTVLSHDGASALIAAADGAVR---LQFAG 276
>gi|536001|emb|CAA84832.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 393
Score = 52.6 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 64/356 (17%), Positives = 105/356 (29%), Gaps = 59/356 (16%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHS-----IVS---VYTQPPRPAGRRGLKSVLSAVHK 53
L V+F G+ F+ +LQAL + IV V T+ P+ GR+ +
Sbjct: 29 PLNVLFFGSDTFSNFSLQALNELRQNNGSCGIVDNIQVVTRSPKWCGRQKSILKYPPIFD 88
Query: 54 KAQEFSLPALVPTKLGQEE-------YEQFLSFNADVAVVVAYGLVIPQR------ILNA 100
A++ LP + QE + + D + ++ L
Sbjct: 89 MAEKLQLPRPITCDTKQEMLALSKLTPSRQGNPENDGSGAPFNAIIAVSFGKLIPGDLIR 148
Query: 101 TKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP---- 156
N H SLLPR +G+APIQRA++ GD TG+ I + + P
Sbjct: 149 AVPLALNVHPSLLPRHKGSAPIQRALLEGDTYTGVTIQTLHPDRFDHGAIVAQTEPLAIA 208
Query: 157 ------------ISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAE 204
N + + + A+ + PQ A
Sbjct: 209 TMLSKGRVNDSTADFNSEGLPRRTAILMDQLGALGAQLLGQTLRERLYLPQNRVQAPTAY 268
Query: 205 KISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK-----------------HER 247
K S + + L + +
Sbjct: 269 KPSYAHRITTEDKRIHWARDSAAELLNKLETLGPLHAFKEATAARKDAQNSVLKRILFHE 328
Query: 248 IKLLESQLVEGEGKPGEV----INPNFTIACSQGAVR-IMRLQRAGGRVLDIGDFL 298
K++ ++ KPG I + C + + RLQ G V G F+
Sbjct: 329 CKVMRDARLDNGSKPGMFKYDDIKDCILVTCRGNLLLCVSRLQFEGFAVERAGQFM 384
>gi|70731031|ref|YP_260772.1| hydrogenase matureation protein HoxX [Pseudomonas fluorescens Pf-5]
gi|68345330|gb|AAY92936.1| hydrogenase matureation protein HoxX [Pseudomonas fluorescens Pf-5]
Length = 572
Score = 52.2 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/241 (14%), Positives = 85/241 (35%), Gaps = 8/241 (3%)
Query: 73 YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNE 132
Q AD+ + +PQ++ + K H ++ RGA+ + AI
Sbjct: 43 CRQIEEAEADLVICPFLKDRVPQQLWSHPKRPVVIIHPGIVG-DRGASALDWAISKELKR 101
Query: 133 TGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPL 192
G+ ++ + +D GP+ + + + + + L L A + + + +N
Sbjct: 102 WGVTALQAVEEMDAGPIWSTHEFNLPAGLRKSELYNGLVSDAAIHCIRDVVEKFRNGYTP 161
Query: 193 SPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLE 252
P + + ++ + + S + I+ ++ + + +
Sbjct: 162 QPLDYDKPSVLGRLQPNMKQSDRTFSWHDSAQFIKRSIDAADGQPGVLASLAGGQYYVYD 221
Query: 253 SQLVEGEGKPGE---VINPNFTIACSQGAVRIMRLQRAGGRVLDIGD-FLLGCPVIIGCI 308
+ L G PG+ V + +AC ++ I L++ + + F ++G
Sbjct: 222 AHLDSRTGMPGQLLAVHDDAVLVACGDHSLWIGSLRQ---KPQPGEETFKRPARHVLGER 278
Query: 309 V 309
+
Sbjct: 279 L 279
>gi|37526535|ref|NP_929879.1| hypothetical protein plu2644 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785966|emb|CAE15018.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 599
Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 47/314 (14%), Positives = 115/314 (36%), Gaps = 27/314 (8%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
V +G + A+ Q L ++ + IV+++ S + A ++
Sbjct: 44 VVIGGTTLAIRCTQQLQAAGYIIVAIF-------------PTESLFFEWATSQNI---HC 87
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
+ ++ + + + +++P ++N G +N H + LPR+ G+ A
Sbjct: 88 VEALEDLLTLSKTESICWLFSIVNPVILPTLLINQFSQGAFNYHDAPLPRYAGSHATSWA 147
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
I+AG+++ I + +D+G + R + + + L + A E ++ L
Sbjct: 148 ILAGESQYAITWHLIGSMVDSGDIVVQRHIDLKNTDTALSLNLKCYQAAAEGFTELLNNL 207
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVH-------NHIRALSPFPGAWLE 238
E ++P Q + + + + + + + P P +
Sbjct: 208 ENGDIPRRQQDPDNRNFFSRRRRPDAAGCLLWNKKAQELSSLVRSLTFGVYYPNPLTLPK 267
Query: 239 MMIGNKHERIKLLESQLVEGEGKPGE---VINPNFTIACSQGAVRIMRLQRAGGRVLDIG 295
+++ ++ I L+ + KPG + ++ + S +RI + G ++
Sbjct: 268 VLLRDRLVSISTLQVMYTRSDHKPGTLLGISEDHWLMTTSSEDIRISFVNSRG-NPINAL 326
Query: 296 DFLLGCPVIIGCIV 309
C + IG +
Sbjct: 327 TLANQCKLDIGDQL 340
>gi|298369949|ref|ZP_06981265.1| methionyl-tRNA formyltransferase [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281409|gb|EFI22898.1| methionyl-tRNA formyltransferase [Neisseria sp. oral taxon 014 str.
F0314]
Length = 261
Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/263 (19%), Positives = 90/263 (34%), Gaps = 13/263 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQAL-VSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M +++FMG + + L+ L + IV V T S A++
Sbjct: 1 MITKILFMGRKQISAGLLEFLSTQADIEIVGVLT---------DSHLQGSPTTAAAKKLG 51
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
LP + E L D+ + V Y + L +LG N H +LLP ++G
Sbjct: 52 LPLYTFDTALEAMKEGRLK--YDLGLSVLYWRKLRDEFLTVPRLGTINFHPALLPEYKGT 109
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AIM +E G +D +DTG + + + PI S++ TA + ++
Sbjct: 110 GGYNLAIMDELSEWGSTAHYVDASIDTGEIIEVDRFPIDSSVETAQSLERKTMQALEPFA 169
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS-PFPGAWLE 238
+ + P N + E + P+ GA++E
Sbjct: 170 QRIIARAVEAQAKLPTTPNIGGRYVSRDEMEAMKRIRDGDDVEKKIRAFWFPPYDGAYVE 229
Query: 239 MMIGNKHERIKLLESQLVEGEGK 261
+ + L ++ +
Sbjct: 230 IDGQKYTLINRQLLEEVAPKDST 252
>gi|28950173|emb|CAD71041.1| related to methionyl-tRNA formyltransferase precursor,
mitochondrial [Neurospora crassa]
Length = 454
Score = 52.2 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ F+ +L+AL + + V +P + G RG S+ + A
Sbjct: 45 PLRILFCGSDVFSCYSLKALHAEHKANPGLIKSIDVMVRPGKAFG-RG-PSIPVPIQNLA 102
Query: 56 QEFSLPALVPTKLGQEE-YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
+E SLP + + ++ V V++GL +P RILN K G N H SLLP
Sbjct: 103 EELSLPIHIRDTFTGWSLPQSPHGEPINLIVAVSFGLFVPPRILNQAKYGGLNVHPSLLP 162
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTG 147
RG AP+ A++ + TG+++ +
Sbjct: 163 DLRGPAPLHHALLNRLSHTGVSLQTLSPQTFDA 195
>gi|163746051|ref|ZP_02153410.1| non-ribosomal peptide synthetase [Oceanibulbus indolifex HEL-45]
gi|161380796|gb|EDQ05206.1| non-ribosomal peptide synthetase [Oceanibulbus indolifex HEL-45]
Length = 1527
Score = 51.8 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 58/314 (18%), Positives = 107/314 (34%), Gaps = 34/314 (10%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
+ MG +A L++ H I +V ++ V AQ L
Sbjct: 13 LLMGDESLTIACGDMLLAGGHQIAAVISRDDT-------------VRDWAQRLGL----- 54
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
E AD + +A +IP+ +L G N H LPR+ G A
Sbjct: 55 VLFRDAEDLLQTRVAADWFLSIANLRLIPEAVLALPSQGAINFHDGPLPRYAGLNTPAWA 114
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
I+ + G++ ++ +DTG + R V I+ + L + + E + +L
Sbjct: 115 IINEEVRHGVSWHLIETGVDTGNLLVQRMVDIAKDETAFSLNSKCYAAGMESFGEVLAQL 174
Query: 186 EQNNLPLSPQIENGITYAEKISKGET-----RVNFCRSAENVHNHIRALSPFPGAWLEMM 240
E L S Q ++ +Y K + E + + + +
Sbjct: 175 ESGTLKSSIQDQSRRSYYAKDKRPENGGVIDFTKRAEEISALVRGLDFGEYWNPLTTAKI 234
Query: 241 IGNKHERIKLLESQLVEGE-GKPG---EVINPNFTIACSQGAVRIMRLQ-RAGGRVLDIG 295
I + + ++++E G PG EV + +A + + ++ AG V D+
Sbjct: 235 ISAAGQLFVVSRAEVLETTGGTPGEVAEVSSARMVVATGDMHLALHSVRNLAGQNV-DLS 293
Query: 296 DFLLGCPVIIGCIV 309
D G +
Sbjct: 294 DI-----FAPGDRL 302
>gi|238791688|ref|ZP_04635325.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia intermedia ATCC 29909]
gi|238728792|gb|EEQ20309.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia intermedia ATCC 29909]
Length = 594
Score = 51.8 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 63/230 (27%), Positives = 120/230 (52%), Gaps = 14/230 (6%)
Query: 79 FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIM 138
DV Y ++ + IL++ G +N H SLLP++RG API A++ G+ ETG+ +
Sbjct: 1 MQPDVIFSFYYRNMLCEEILSSAPQGGFNLHGSLLPKYRGRAPINWALVNGETETGVTLH 60
Query: 139 KMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIEN 198
+M K D GP+ +KV IS + L ++ + + + K+++++L +PQ E
Sbjct: 61 QMVKKADAGPIVGQQKVIISDDDTALTLHAKMREASQELLRDILPKMKRSSLHPTPQKEA 120
Query: 199 GITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIGNKHERIKLLESQLVE 257
+Y + + + VN+ +SA +++N +R P+PGA+ + ++ + ++ +
Sbjct: 121 DASYFGRRTAADGEVNWHKSASDINNLVRAVTEPYPGAFSYLG----QRKLIIWRARPLT 176
Query: 258 -GEGK-PGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVI 304
GK PG V++ + +AC +GA+ I+ Q G D G ++ G +
Sbjct: 177 VAHGKLPGTVLSISPLVVACGEGALEIVTGQ--G----DAGLYVQGSRLA 220
>gi|303279522|ref|XP_003059054.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460214|gb|EEH57509.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 296
Score = 51.8 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Query: 4 RVVFMGTSEFAVATLQALV------SSSHSIVSVYTQPPRPAGRRGLK----SVLSAVHK 53
R+VF+GT + A L A+ ++ + +V +QP RP G RG K S V
Sbjct: 123 RLVFLGTPDVAAGALSAIFDAAETPDAAFEVHAVVSQPGRPRG-RGRKSSGPPPPSPVAA 181
Query: 54 KAQEFSLP 61
A +P
Sbjct: 182 LAATRGVP 189
>gi|297838331|ref|XP_002887047.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332888|gb|EFH63306.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 204
Score = 51.8 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE-RIKLLE 252
PQ + T A K++ E ++F + A +HN +RA + +PG + ++ + + K+LE
Sbjct: 76 PQDDPKATLAPKLAPDEAWLSFDQEAFVLHNKVRAFAGWPGTCAKFVVFDDKSSQEKVLE 135
Query: 253 SQLV-----------EGEGKPGEVINPNFTIAC-SQGAVRIMRLQRAGGRVLDIGDFLLG 300
+++ +GE + C A+ ++ ++ +G + + F G
Sbjct: 136 LKIITTRVCQALEIWDGEQDYVTFKKGSLMFPCKGDTALEVLEVRPSGKKAIKAAAFWNG 195
Query: 301 CPVIIGCIV 309
G +
Sbjct: 196 LR---GQKL 201
>gi|312212177|emb|CBX92261.1| hypothetical protein [Leptosphaeria maculans]
Length = 369
Score = 51.8 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 115/277 (41%), Gaps = 20/277 (7%)
Query: 2 TLRVVFMGTSEFAVATLQAL----VSSSHSIVS---VYTQPPRPAGRRGLKSVLSAVHKK 54
L+V+F G+ EF++A+L+AL + ++ V +P +P GR + + K
Sbjct: 32 ALKVLFCGSDEFSIASLRALTAVHRDAP-ELIGSLNVVHRPAKPTGRGLKQLRQVPIQKV 90
Query: 55 A-QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
A +E LP ++ + + V++GL++P R+L++ K G N H SLL
Sbjct: 91 AEEELKLPTYALDTFTGWAPPTPIN----LIIAVSFGLLVPSRLLSSAKFGGLNLHPSLL 146
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
P +G APIQ I+ TG+++ + + + + +EL
Sbjct: 147 PDLKGPAPIQHTILRRREYTGVSVQTLHPEHFDQGLVLAQTPSPGIQVPAGTTARELEAQ 206
Query: 174 CAHAMVEAMDKLEQNNLPLSP-QIENGITYAEKISKGETRVNFCRSAENVH-----NHIR 227
A + + +L ++ + P + + ++ +++ +
Sbjct: 207 LAKTGADMLVQLLRSRKYMPPWEDAGWYGSSNGPLDHAPKITNNDRYIDLNTSPLEDIHT 266
Query: 228 ALSPFPGAWLEMMIGNKHERIKLLESQLVE-GEGKPG 263
+ +W + G + +++++ +++ GKPG
Sbjct: 267 IQNALGDSWCLLPDGQRLILHRVVDTGVIDPSHGKPG 303
>gi|45658035|ref|YP_002121.1| methionyl-tRNA(fmet) n-formyltransferase [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|294827914|ref|NP_711777.2| methionyl-tRNA(fmet) n-formyltransferase [Leptospira interrogans
serovar Lai str. 56601]
gi|45601276|gb|AAS70758.1| methionyl-tRNA(fmet) n-formyltransferase [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|293385759|gb|AAN48795.2| methionyl-tRNA(fmet) n-formyltransferase [Leptospira interrogans
serovar Lai str. 56601]
Length = 308
Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 97/270 (35%), Gaps = 14/270 (5%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKA-QEFSLPA 62
R + +GTS+ + ++AL+ S SIV V++ P +G S +E+ +P
Sbjct: 4 RYIVIGTSQATLECIKALLDSKKSIVGVFSLP------KGKLPDNSIGLSYCQKEYGIPY 57
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L E+ ++ ++ + +I ++I + H + LP +G P+
Sbjct: 58 FEVEDLNSASSEETIAKLNPDYIISTWPKIISKKI-ISIPKKLIGTHPTPLPFNKGRHPL 116
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
I+ G + + +MD+ +D+G V I + + + +
Sbjct: 117 HWMIVLGIPNSVVTFFEMDEGVDSGKVLLQIPFQIGLKQIHDLVIRMNKAIYDGVVKLVR 176
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRS-AENVHNHIRALSPFPGAWLEMMI 241
+ P S Q N Y ++ + ++ + + SP+P A L
Sbjct: 177 ILETNPDFPGSLQNHNEGNYWRTRTEDDVTLDPRMTASMIKRIVRSFSSPYPNANLYYKQ 236
Query: 242 GNKHERIKLLESQLVE-----GEGKPGEVI 266
+ E E + G+V+
Sbjct: 237 NLYIKIEHAEEIDETELPPNWQSLEHGQVL 266
>gi|260464154|ref|ZP_05812348.1| formyl transferase domain protein [Mesorhizobium opportunistum
WSM2075]
gi|259030139|gb|EEW31421.1| formyl transferase domain protein [Mesorhizobium opportunistum
WSM2075]
Length = 299
Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 56/288 (19%), Positives = 110/288 (38%), Gaps = 11/288 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLS--AVHKKAQEFSL 60
+R+ F+G E + ALV + + + T + R LS A A
Sbjct: 1 MRIAFVGAVEGSRVAFDALVEAGMTPSLLVTLADDASARHSDFVDLSGPARAAGASAH-- 58
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L + D+ +VV + + +LG H + LPR+RG A
Sbjct: 59 --LTKNINAPDTIAWLTEGRPDLTLVVGWSQICRAEFRAIARLGSIGFHPAPLPRFRGRA 116
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
I I+A + ETG ++D+ +D+GP+ + P++ + L ++
Sbjct: 117 VIPWTIIANEKETGSTFFRLDEGVDSGPIVMQKLFPVAEDETARSLYEKHKQALREMTPL 176
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEM 239
+ + ++N Q ++ +Y K S + +++ ++AE++ +R P+PGA+
Sbjct: 177 VVSAIARDNNVGILQDDSLASYCAKRSADDGSIDWTQTAESILRLVRAVGDPYPGAFTLD 236
Query: 240 MIGNKHERIKLLESQLVEGEGKPGEV---INPNFTIACSQG-AVRIMR 283
+ + G G+V F + C G + +
Sbjct: 237 GGSKIFVDQARMFAGRGRYIGLSGQVQAHTGSGFAVLCGDGETIEVTS 284
>gi|261885371|ref|ZP_06009410.1| methionyl-tRNA(fmet) n-formyltransferase [Campylobacter fetus
subsp. venerealis str. Azul-94]
Length = 301
Score = 51.4 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 100/281 (35%), Gaps = 15/281 (5%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
R + +GTS+F + + ++ S + + V + P + K +F +
Sbjct: 3 RCIVLGTSKFTASLIYGIIDSLNEVSCVISMPDTSKPN-----NPYDLKKICNKFGIKYY 57
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+ E + +V ++ +I ILN H + LP+ RG P+
Sbjct: 58 EFEDINSAEAINLIKKINPNFIVSSWPKIIKNEILNLAY--VIGTHPTNLPKDRGRHPLH 115
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
I+ G ++ ++ KMDK++D+G + K IS + L ++ L +
Sbjct: 116 WNIIRGIKKSKLSFFKMDKNIDSGNLLLQLKYAISKYDDINSLNHKIEKLAKTGI---NK 172
Query: 184 KLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGN 243
L +N + Q N + SP+P A L +
Sbjct: 173 LLSRNKMKEIAQSGNTNYLRARNIHDCLIDPRMEYKTIDRIVRSFTSPYPCAKLIVENQI 232
Query: 244 KHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRI 281
+ + L + + G G+++ + CS +++
Sbjct: 233 LNIKKCCL-IEKGDKLGY-GKILKESTNFIIFQCSDSVIKL 271
>gi|197099500|ref|NP_001125471.1| 10-formyltetrahydrofolate dehydrogenase [Pongo abelii]
gi|55728154|emb|CAH90827.1| hypothetical protein [Pongo abelii]
Length = 811
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 11/218 (5%)
Query: 95 QRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRK 154
I+NA + G H SLLPR RGA+ I ++ GD + G +I D LDTG + ++
Sbjct: 1 MEIINAPQHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKE 60
Query: 155 VPISSNINTAGLQQEL-SVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRV 213
+ + + L MV+A+ + + P PQ E G TY K ++
Sbjct: 61 CEVLPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKAPRLPQPEEGATYEGIQKKETAKI 120
Query: 214 NFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLL---------ESQLVEGEGKPGE 264
N+ + AE +HN IR PGAW E L ++ + G +PG
Sbjct: 121 NWDQPAEAIHNWIRGNDKVPGAWTEACEQKLTFFNSTLNTSGLVPEGDALPIPGAHRPGV 180
Query: 265 VINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFLLGC 301
V + + + + +Q G+++ +F G
Sbjct: 181 VTKAGLILFGNDDKMLLVKNIQLEDGKMILASNFFKGA 218
>gi|297696864|ref|XP_002825597.1| PREDICTED: methionyl-tRNA formyltransferase, mitochondrial-like
[Pongo abelii]
Length = 144
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 16/71 (22%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-------HSIVSVYTQP-PRPAGRRGLKSVLSAVHKKA 55
RV+F GT +FA L+AL ++ + V T P P P G V + A
Sbjct: 49 RVLFFGTDQFAREALRALHAARENKEEELIDKLEVVTMPSPSPKGL--------PVKQYA 100
Query: 56 QEFSLPALVPT 66
+ LP
Sbjct: 101 VQSQLPVYEWP 111
>gi|221043586|dbj|BAH13470.1| unnamed protein product [Homo sapiens]
Length = 144
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 16/71 (22%)
Query: 4 RVVFMGTSEFAVATLQALVSSS-------HSIVSVYTQP-PRPAGRRGLKSVLSAVHKKA 55
RV+F GT +FA L+AL ++ + V T P P P G V + A
Sbjct: 49 RVLFFGTDQFAREALRALHAARENKEEELIDKLEVVTMPSPSPKGL--------PVKQYA 100
Query: 56 QEFSLPALVPT 66
+ LP
Sbjct: 101 VQSQLPVYEWP 111
>gi|77459349|ref|YP_348856.1| enoyl-CoA hydratase/isomerase [Pseudomonas fluorescens Pf0-1]
gi|77383352|gb|ABA74865.1| putative Enoyl-CoA hydratase/isomerase [Pseudomonas fluorescens
Pf0-1]
Length = 572
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/227 (11%), Positives = 73/227 (32%), Gaps = 7/227 (3%)
Query: 73 YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNE 132
EQ + AD+ + +P + + + H ++ +A + +
Sbjct: 43 CEQIENSGADLVICPFLKDRVPHALWSNPQRPVVIIHPGIVGDRGASALDWAIMRELPSW 102
Query: 133 TGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPL 192
+ ++ + +D GPV + + + + + L A + + + +
Sbjct: 103 G-VTALQAVEEMDAGPVWATCEFNLPTGLRKSELYNGRVSDAAICCIREVVEKFIDGFVP 161
Query: 193 SPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLE 252
N ++ + + S + I+ ++ + + +
Sbjct: 162 VALDYNDPKVRGRLQPNMKQDDRTFSWHDCSRFIKRCIDAADGQPGVLASLAGGQYYVFD 221
Query: 253 SQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
+ L + G PGE++ + +A ++ I L+R + +
Sbjct: 222 AHLDQRTGMPGEILAVHDDAVLVATGDHSLWIGSLRR---KPQPGEE 265
>gi|160936039|ref|ZP_02083412.1| hypothetical protein CLOBOL_00935 [Clostridium bolteae ATCC
BAA-613]
gi|158440849|gb|EDP18573.1| hypothetical protein CLOBOL_00935 [Clostridium bolteae ATCC
BAA-613]
Length = 276
Score = 51.0 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/205 (19%), Positives = 79/205 (38%), Gaps = 13/205 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSA--VHKKAQEFSL 60
+++V+ G+ F + + L +H I+++YT + + V + A +
Sbjct: 1 MKIVYFGSDVF-LDVFEYLH-LNHEILALYT-------YHMEEDYFNEHNVVQLAHMSGI 51
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P E ++ V Y IP + + ++ N H+SLLP R
Sbjct: 52 PVCYGQITEDEMLSYMEKEGCELFFVAEYSHKIP--VPDDSRFYGVNIHSSLLPEGRSYY 109
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
P++ A+ G +G+ + K+ K LD G + RK I ++ + + + E
Sbjct: 110 PVECAMERGLGRSGVTMHKIAKSLDRGDILAQRKYDIQPGNDSVDIYLKSGRQALSMVKE 169
Query: 181 AMDKLEQNNLPLSPQIENGITYAEK 205
M+ ++ PQ E +
Sbjct: 170 LMEDFDRVWSNARPQKEKLPYWNRP 194
>gi|281210665|gb|EFA84831.1| methionyl-tRNA formyltransferase [Polysphondylium pallidum PN500]
Length = 424
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 72/361 (19%), Positives = 138/361 (38%), Gaps = 72/361 (19%)
Query: 2 TLRVVFMGTSEFAVATLQALVS---------------------SSHSIVS----VYTQPP 36
+V+F GT + ++ TL L S++ +V V P
Sbjct: 48 PYKVLFFGTDQVSINTLTLLHENNKIKNNNNNNNADTSISTNNSNNKLVVDELEVVC-PD 106
Query: 37 RPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQ-----FLSFNADVAVVVAYGL 91
V++ A+ ++P P K + + + D+A+VV++G
Sbjct: 107 NKNEL---------VYQYAKSNNIPMYHPDKENGMKGFKVPLSSKSNQPFDIAIVVSFGY 157
Query: 92 VIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVA 150
IP+ +L++ K G N H SLLPR RG API +++GD ETGI+I+ +D D G +
Sbjct: 158 FIPKSVLSSFKYGGINMHPSLLPRHRGPAPIHHTLLSGDKETGISIITLDPKKFDVGDIL 217
Query: 151 FMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGE 210
+ I +I L +L+ A +++ +++ + + Q E G T A K+++ +
Sbjct: 218 LQTRQKIRPDILYLELTNKLTTNGAAMVIKTLEQFVEMSKNAVAQSEVGATKAPKVNRQQ 277
Query: 211 TRVNFCRSAENVHNHIRALSP---FPGAWLEMMIGNKHERIKLLESQLVEGEG------- 260
+++ + + ++ + +R+K+ G G
Sbjct: 278 SKIEWSQHDCATIWNMYRAFSDTIGVSTTVYSKKYKNWKRLKITGMLAPPGAGVDPVANS 337
Query: 261 ----------------KP-GEV---INPNFTIACSQGAVRIMRLQRAGGR-VLDIGDFLL 299
+P G N I G + + ++ G + + +FL
Sbjct: 338 KLYSSLNEDLKQLSGAEPYGTYFLGTNKLMWIKAKDGWIGVSKIYEDGKKNDVQAHEFLF 397
Query: 300 G 300
G
Sbjct: 398 G 398
>gi|262404980|ref|ZP_06081532.1| hypothetical protein VOA_002978 [Vibrio sp. RC586]
gi|262348819|gb|EEY97960.1| hypothetical protein VOA_002978 [Vibrio sp. RC586]
Length = 395
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/285 (16%), Positives = 106/285 (37%), Gaps = 25/285 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS--HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
++V+ G + A+ ++AL+ + +++ G G + K +
Sbjct: 1 MKVLVAGKNNIAIDVVKALLYRPEVDEVFAIFNANDN--GIDGFQRSF---KKFCLSNGI 55
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+L ++ E FLS D V + YN H SLLP+++G
Sbjct: 56 KSLSLSEAYGCEDALFLSLEFDKIVDPN----------RFSHKNIYNIHFSLLPKYKGMY 105
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
I+ G++ +G+ +D+ +DTG + F ++ + L Q+ ++
Sbjct: 106 TSAWPIINGESTSGVTFHCIDRGIDTGDIIFQEAFTLAEHETAKSLYQKYIDTGTCLILR 165
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + +L PQ + +Y K S + V + N + +
Sbjct: 166 NLKNILSGDLVKRPQGSDKSSYYSKKSIDYSNV---KIDFNKAAFQVKRQIDAFTFRDYQ 222
Query: 241 IGNKHERIKLLESQLVEGEG--KPGEVINPNF--TIACSQGAVRI 281
+ + + R K+ ++ + + KPG +I + +A + +
Sbjct: 223 LPDINGR-KVCGVEISDNKSKEKPGSLIEDDISFMVATIDFDILV 266
>gi|126724832|ref|ZP_01740675.1| non-ribosomal peptide synthetase [Rhodobacterales bacterium
HTCC2150]
gi|126705996|gb|EBA05086.1| non-ribosomal peptide synthetase [Rhodobacterales bacterium
HTCC2150]
Length = 1513
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/291 (15%), Positives = 84/291 (28%), Gaps = 28/291 (9%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ + +G + Q + I + + + + + A +P
Sbjct: 1 MNALMIGNGSLLIQCAQIWLDRRQEISGIIS-------------ENAEIREWAARKEIPV 47
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ D VA ++P L K+G N H LP + G
Sbjct: 48 FADYSQVDIV-------SVDWLFSVANLKMLPASFLKIAKIGALNFHDGPLPCYAGLNAP 100
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ + GI M DTG + R I + L + +
Sbjct: 101 VWALLNHEKRHGITWHLMQDRADTGDIVEQRIFEIPAGETALSLNAKCYAAGIDGFTALV 160
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
D L NL Q Y + ++ + + + G + +
Sbjct: 161 DPLIAGNLAPESQDTQNRHYFGRNARPKAAGVLDFTTSAQDVVRFVNALDHGNYANPLAV 220
Query: 243 NKHERIKLL-----ESQLVEGEGKPGEVINPN---FTIACSQGAVRIMRLQ 285
K + S + + G G V+ TIAC GAV + ++
Sbjct: 221 AKIIIEDQVFLVGNASAIDDQTGNAGTVLKTGVNELTIACHNGAVALSDIK 271
>gi|255022829|ref|ZP_05294815.1| methionyl-tRNA formyltransferase [Listeria monocytogenes FSL
J1-208]
Length = 69
Score = 50.7 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Query: 250 LLES--QLVEGEGKPGEVINPN--FTIACSQGAVRI-MRLQRAGGRVLDIGDFL--LGCP 302
+ E+ + ++ G+PG ++ I + + +Q AG +DI F+ G
Sbjct: 1 IWEATYEEIKWSGEPGAILADKTTLKIVAGDETLIVPTVIQPAGKPKMDIHSFMSGAGRN 60
Query: 303 VIIGCIVG 310
+ G
Sbjct: 61 LSETTRFG 68
>gi|34498273|ref|NP_902488.1| methionyl-tRNA formyltransferase [Chromobacterium violaceum ATCC
12472]
gi|34332850|gb|AAQ60486.2| methionyl-tRNA formyltransferase [Chromobacterium violaceum ATCC
12472]
Length = 286
Score = 50.3 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 83/271 (30%), Gaps = 15/271 (5%)
Query: 16 ATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQ 75
L + + + V+ P R + +V A++ LP + + E
Sbjct: 13 PVLDVFLQAGWQPLKVFCTP---VDHR-MHHNKLSVA-FAEQRKLPLQLSPLRTHDLAEL 67
Query: 76 FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGI 135
+ V + N H S LP RG P RA++ G E
Sbjct: 68 AEQGCEALLVGSYNWRIPDWTSYLKY---AVNFHPSPLPLGRGPYPQVRALLDGHREWAC 124
Query: 136 AIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQ 195
K+ D G + + P+ + L +L + ++ PQ
Sbjct: 125 TCHKVGPDFDAGDILDQERFPLGEADSHQMLDIKLQLALHRLSHRLAHDFDRLWRDARPQ 184
Query: 196 IENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQL 255
G +Y + + ++F R+ + +RA F A + + R +
Sbjct: 185 -GEGGSYWPLWTDHDRMLDFSRTTAELLRQVRAFGDFECAAVVNNVTFFVHRAEGWTET- 242
Query: 256 VEGEGKPGEVI---NPNFTIACSQGAVRIMR 283
PG +I +A + G + I
Sbjct: 243 --HNFAPGSLIYSQAEQLLVATADGMLLISE 271
>gi|254496714|ref|ZP_05109576.1| hypothetical protein LDG_1153 [Legionella drancourtii LLAP12]
gi|254354055|gb|EET12728.1| hypothetical protein LDG_1153 [Legionella drancourtii LLAP12]
Length = 1548
Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 91/281 (32%), Gaps = 26/281 (9%)
Query: 16 ATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQ 75
+ ++S +H I+ + + A + A +P K + +
Sbjct: 2 ECAEIILSYNHLILGIIS-------------SFPAAEQFAAHKKIP---HFKKFSDAHPV 45
Query: 76 FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGI 135
D + G+++P +L N H S LP++ G AI+ ++ G+
Sbjct: 46 LSITAFDYLFSIVNGVILPASLLQQANCLAINYHNSPLPKYAGLHAPSWAILNNESSHGV 105
Query: 136 AIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQ 195
M + +D G + + I + L + + E + L L PQ
Sbjct: 106 TWHTMVEEIDAGDILKQAFIEIEPDETGLSLSVKCYQEALNTFKELIYDLTWQQLAAIPQ 165
Query: 196 IENGITYAEKISKGET--RVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLL-- 251
+Y + K +++ SAE + RAL+ + + +
Sbjct: 166 NLKQRSYFDYYKKPRHGGWISWHESAETIERMCRALNLGHHYHNRLGLPKFNLGTDFFLV 225
Query: 252 ---ESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRLQR 286
V PG ++ + +A +++ +L
Sbjct: 226 TQARMIAVHSNAAPGTLLKLTADYWQVATKNQIIQLEQLIP 266
>gi|289618850|emb|CBI54675.1| unnamed protein product [Sordaria macrospora]
Length = 420
Score = 50.3 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
LR++F G+ F+ +L+AL + + V + + GR + + A
Sbjct: 52 PLRILFCGSDVFSCYSLKALHAEHKANPGLIKSIDVMVRTGKAVGRGYKEIRQVPIQNLA 111
Query: 56 QEFSLPALVPTKLGQE 71
+E SLP +
Sbjct: 112 EELSLPIHIRDTFTGW 127
>gi|297560155|ref|YP_003679129.1| formyl transferase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296844603|gb|ADH66623.1| formyl transferase domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 328
Score = 49.9 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 52/281 (18%), Positives = 104/281 (37%), Gaps = 6/281 (2%)
Query: 10 TSEFAVATLQALVSSS-HSIVSVYTQPP-RPAGRRGLKSVLSAVHKKAQEFSLPA-LVPT 66
S+ L L + +V T PP + + +A+ +P +
Sbjct: 14 NSKLGSPFLDMLHHHPLIDLAAVVTSPPGKVCDYFVSDDQQVDLEGRAERLGVPVLRPRS 73
Query: 67 KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAI 126
+ E + D +V + V+ +L+ ++ N H S LPR+ G AP +
Sbjct: 74 VNSPDTVEALRAMAPDYLIVGNFQQVLKADLLSVPRVTSVNFHPSPLPRYAGLAPFYWMV 133
Query: 127 MAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLE 186
G+ E + ++M + LDTG + P++ L+ +++ + L
Sbjct: 134 RNGETEGAVTAIEMAEGLDTGAILAQHATPLTGRETALELRTIQERANVLMLLDLIPSLA 193
Query: 187 QNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
+ L PQ + TY + + R++F +A V H+RA PGA+ + G
Sbjct: 194 RRTLTRVPQDPSERTYFTRPGADQYRLDFTYTAHKVSCHVRAGYRHPGAFAQTPEGETVT 253
Query: 247 RIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMRL 284
+ + V ++ + C +R++ +
Sbjct: 254 ILSVTGGGPVPDGPPVPGLVRTSPEGVFVGCRDAWLRVLTI 294
>gi|226330383|ref|ZP_03805901.1| hypothetical protein PROPEN_04301 [Proteus penneri ATCC 35198]
gi|225201178|gb|EEG83532.1| hypothetical protein PROPEN_04301 [Proteus penneri ATCC 35198]
Length = 574
Score = 49.9 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 8/188 (4%)
Query: 106 YNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAG 165
+N H SLLP++RG API AI+ G+ ETG+ + KM D G + KV I+ N +
Sbjct: 15 FNLHGSLLPKYRGRAPINWAIVNGETETGVTLHKMTAKADAGDIVAQEKVTIADNDTSLI 74
Query: 166 LQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNH 225
L +++ + ++ + + + Q E+ TY + + +++ A+ VHN
Sbjct: 75 LHEKVREAANKLLSSSLPHIVSGDYSTTAQDESQATYFGRRCADDGLIDWNADAKTVHNL 134
Query: 226 IR-ALSPFPGAWLEMMIGNKHERIKLLESQ-LVEGEGK-PGEVINPN-FTIACSQGAVRI 281
+R P+PGA+ + ++ + S+ + + +GK PG VI+ IAC++GA+ +
Sbjct: 135 VRAVTEPYPGAFTFLGER----KMIIWRSRAVADNQGKRPGTVISTEPLVIACAKGAIEV 190
Query: 282 MRLQRAGG 289
+ Q G
Sbjct: 191 VTGQSENG 198
>gi|328874160|gb|EGG22526.1| methionyl-tRNA formyltransferase [Dictyostelium fasciculatum]
Length = 454
Score = 49.9 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 70/356 (19%), Positives = 119/356 (33%), Gaps = 72/356 (20%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS--------SHSIVSVYTQPPRPAGRRGLKSVLSAVHK 53
+ RV+F GT ++ TL+ L + +V P V++
Sbjct: 79 SFRVLFFGTDHVSIHTLKKLHDNLKIDRLIKELEVVC----PNNKDEL---------VYQ 125
Query: 54 KAQEFSLPALVPTKLGQEEYEQ-----FLSFNADVAVVVAYGLVIPQRILNATKLGFYNG 108
A++ L P + Q D+AVVV++G IP+++LN G N
Sbjct: 126 YAKKEGLSMYHPDIETGMKQFQVPVSSKSGKPFDMAVVVSFGYFIPKKVLNTFTFGGINV 185
Query: 109 HASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQ 167
H SLLP++RGAAPI ++ D ETG++I+K+D D G + K I N L
Sbjct: 186 HPSLLPKYRGAAPIYHTLINDDRETGVSIIKLDPLKFDVGDILDQTKYKIKGNTLYLELL 245
Query: 168 QELSVLCAHAMVEAMDKLEQNNLPLSPQI-ENGITYAEKISKGETRVNFCRSAENVHNHI 226
EL+ + A++++ +D+ + + + K + N
Sbjct: 246 NELASIGANSVIRVLDQFKNLIPWAQGEDGVSRAPKINKDNGRIDWENDTCQDIWTKYRA 305
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLES--QLVEGEGKPG--------------------- 263
+ + +R+KL + LV+G G
Sbjct: 306 FSDTISIYTHYYSKKSKAWKRVKLYDMINPLVKGSNIFGIDLNQQQSQLSMMNDIIEDTK 365
Query: 264 ------EVINPN---------------FTIACSQGAVRIMRLQRAGGRVLDIGDFL 298
+ + C G V G + L +F
Sbjct: 366 HLQLDHTIQKNGQYFITFDRKKSYFGIIWVKCLDGWVGFKSAHEEGKKRLLAKEFF 421
>gi|330897444|gb|EGH28863.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 561
Score = 49.9 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 10/209 (4%)
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H SLLPR+RG AP ++ G++ETG+ + +M K D GP+ ++V IS+ L
Sbjct: 1 NLHGSLLPRYRGRAPANWVLVNGESETGVTLHQMVKRADAGPIVAQQRVSISATDTALTL 60
Query: 167 QQELSVLCAHAMVEAMDKLEQNNL-PLSPQIENGITYAEKISKGETRVNFCRSAENVHNH 225
+L A + E + L P +PQ E+ TY + + + +++ ++N
Sbjct: 61 HGKLRDAAADLLCETLPLLAAQGQLPATPQDESRATYFGRRTPADGLIDWSLPGTQLYNL 120
Query: 226 IR-ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEG--KPGEVINPN-FTIACSQGAVRI 281
IR P+PGA+ + ++ + + + PG VI+ IAC G++ I
Sbjct: 121 IRAVTQPYPGAFCPVGDN----KLIIWAASVDTSSNGEAPGTVISHEPLRIACGDGSLVI 176
Query: 282 MRLQR-AGGRVLDIGDFLLGCPVIIGCIV 309
QR G L ++ G +
Sbjct: 177 TAGQRGDNGLYLSGAQLAREFGLVAGSQL 205
>gi|118594651|ref|ZP_01551998.1| putative formyltransferase [Methylophilales bacterium HTCC2181]
gi|118440429|gb|EAV47056.1| putative formyltransferase [Methylophilales bacterium HTCC2181]
Length = 310
Score = 49.5 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 50/315 (15%), Positives = 111/315 (35%), Gaps = 26/315 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPP-----RPAGRRGLKSVLSAVHKK--A 55
+++ G L+ L S++ T+P ++ S V+ A
Sbjct: 1 MKICVFGNKSATSELLKHLTSNN-------TRPHTLATLSKESFGKIEISGSDVNICSQA 53
Query: 56 QEFSLPALVPTKL---GQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS- 111
+ + + + F D+ + + +IP+ ILN KLG + H S
Sbjct: 54 ESLGINVYTTDSYGLKNAHDQDFFTKQAFDLGICTGWQRLIPKEILNTFKLGVFGWHGSG 113
Query: 112 -LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL 170
LP RG +P+ I G E K + DTG + + I+ + A + ++
Sbjct: 114 FNLPNGRGRSPLNWTIRLGLKEVFHNCFKYAEDADTGHIYETLRFDINEDDYIADVLEKA 173
Query: 171 SVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
+ + + + LS Q +++ +++ +I
Sbjct: 174 KAHIKGSSLRLIRDAANGEITLSRQGNYPAIAFPALNEASGKIDPSVFLAKDVINIIRSC 233
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLVE--GEGKPG--EVINPNFTIACSQGAVRIMRLQR 286
P + + + + +I++ +++ E + + G ++ I C A+++ +
Sbjct: 234 SSPFPGSYLYVQDNNTKIRIWNAEINEDINDLEIGYARIMGKALFIRCKDKAIKVNDFEF 293
Query: 287 AGGRV---LDIGDFL 298
+V L+ DF
Sbjct: 294 ESTKVFNDLEGADFF 308
>gi|83952227|ref|ZP_00960959.1| non-ribosomal peptide synthetase [Roseovarius nubinhibens ISM]
gi|83837233|gb|EAP76530.1| non-ribosomal peptide synthetase [Roseovarius nubinhibens ISM]
Length = 1576
Score = 49.5 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 88/267 (32%), Gaps = 24/267 (8%)
Query: 23 SSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNAD 82
+ H I +V +Q AV AQ L L + + D
Sbjct: 24 EAGHVIRAVVSQ-------------DQAVRDWAQAEGLAVLSTP---EALHGLAGETRFD 67
Query: 83 VAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDK 142
+ VAY ++P+ +L G N H LP + G A +AG+ E I +MD
Sbjct: 68 WLLSVAYLALLPEDVLRLAGKGAVNFHDGPLPGYAGLNTPVWAKLAGETEHAITWHRMDA 127
Query: 143 HLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITY 202
+DTG V R+ I GL + E ++ L + PQ E
Sbjct: 128 GIDTGAVLLDRRFDIRPEDTAQGLNTKAYAAGLETFPELIEMLARGEGDGVPQPEGTRRL 187
Query: 203 AEKISKG----ETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQ-LVE 257
+ + + A + + +K + + + + E
Sbjct: 188 CRRDDRPTAGGCLDFAEGQDAVLRLVRGLDFGEYWNPLCRAKLMSKSGVVLVGAADLVAE 247
Query: 258 GEGKPGEVIN---PNFTIACSQGAVRI 281
+G GEV+ +A GAVR+
Sbjct: 248 RQGAVGEVLEVSRDGVIVAAKDGAVRL 274
>gi|332139714|ref|YP_004425452.1| methionyl-tRNA formyltransferase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549736|gb|AEA96454.1| methionyl-tRNA formyltransferase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 278
Score = 49.1 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 106/284 (37%), Gaps = 21/284 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++V+ G+ F+ L L+ +I V+ ++ S + + + ++
Sbjct: 1 MKIVYFGSDLFS-NCLSLLIKIRLNIELVF--------INDVQENASFIKRICRTHNI-V 50
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ +++L+ V VV YG +P + N H SLLP+ RG P+
Sbjct: 51 YSTERPSVVTLKEYLNDEQTVFVVADYGYKLPINEIKY----AINIHPSLLPKSRGPTPL 106
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
I G++I K+ + LD G + K + N + L + +L + E +
Sbjct: 107 TYIIDNP-ENAGVSIHKLTEKLDAGSILIQEKFEVEDNETISSLMVKSQLLAETLLEELL 165
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + +PQ+E ++ VN+ ++ + +R F + +
Sbjct: 166 NNFNELYNNATPQLEKLASFQSLPPVKRRFVNWDQNTTQFSHALRQYGHFGIL---ISLD 222
Query: 243 NKHERIKLLESQLVEGEGKPGEVI-NPNFT--IACSQGAVRIMR 283
N +E + G VI IA + G V + +
Sbjct: 223 NALYIANDVEVTTFSHDFTCGSVIFEDALIKSIAINDGYVVLSK 266
>gi|258545412|ref|ZP_05705646.1| methionyl-tRNA formyltransferase [Cardiobacterium hominis ATCC
15826]
gi|258519381|gb|EEV88240.1| methionyl-tRNA formyltransferase [Cardiobacterium hominis ATCC
15826]
Length = 193
Score = 49.1 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 61/178 (34%), Gaps = 21/178 (11%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+RVV G A L A ++ S+ I+ T P AG + V AQ +P
Sbjct: 1 MRVVIAGQKWLATEILAACIARSYDILLAVTNP---AGSFAKAAAGQGVAVSAQIADIP- 56
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
DV V +P I K G H SLLPR RG +
Sbjct: 57 -----------------PCDVIVAAHLHQYLPASIRARAKSGVIAYHPSLLPRHRGRDAV 99
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
+ AI + TG + +MD DTG + I A L Q ++
Sbjct: 100 RWAIHMREPITGGTVYRMDDGADTGALLAQDWCHIRPEDTAATLWQRELAPMGVRLMM 157
>gi|289451022|gb|ADC93938.1| methionyl-tRNA (fmet) N-formyltransferase [Leptospira interrogans
serovar Autumnalis]
Length = 308
Score = 48.7 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 97/271 (35%), Gaps = 16/271 (5%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHK--KAQEFSLP 61
R + +GTS+ + ++AL+ S SIV +++ P K +++ +E+ +P
Sbjct: 4 RYIVIGTSQATLECIRALLDSKKSIVGLFSLP-------KEKLPNNSIGLSYCQKEYGIP 56
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L E+ ++ ++ + +I ++I + H + LP +G P
Sbjct: 57 YFEVEDLNSASSEETIAKLNPDYIISTWPKIISKKI-ISIPKKLIGTHPTPLPFNKGRHP 115
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ I+ G + + +MD+ +D+G + I + + +
Sbjct: 116 LHWMIVLGIPNSVVTFFEMDEGVDSGKILLQIPFQIGLRQIHDLVIIMNKAIYDGVVKLV 175
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRS-AENVHNHIRALSPFPGAWLEMM 240
+ P S Q + Y ++ + ++ + + SP+P A L
Sbjct: 176 RILETNPDFPGSLQNHSEGNYWRTRTEDDVTLDPRMTASMIKRIVRSFSSPYPNANLYYK 235
Query: 241 IGNKHERIKLLESQLVE-----GEGKPGEVI 266
+ E E + G+V+
Sbjct: 236 QNLYIKIEHAEEIDETELPPNWQSLEHGQVL 266
>gi|332139790|ref|YP_004425528.1| methionyl-tRNA formyltransferase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549812|gb|AEA96530.1| methionyl-tRNA formyltransferase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 278
Score = 48.7 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 108/284 (38%), Gaps = 21/284 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++V+ G F+ L L+ + +I V+ ++ S + + +++++
Sbjct: 1 MKIVYFGNDLFS-NCLSLLIKNRLNIERVF--------INDVQENASFIKRICRKYNI-V 50
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
K + +L+ V VV YG +P + N H SLLP+ RG P+
Sbjct: 51 YSTEKPSIVTLKGYLNDEQTVFVVADYGYKVPTNEIKY----AINIHPSLLPKSRGPTPL 106
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
I G++I K+ + LD G + K + +N + L + +L + E +
Sbjct: 107 TYIIDNP-ENAGVSIHKLTEKLDAGSILIQEKFEVENNETISSLMVKSQLLAETLLEELL 165
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + +PQ+E ++ VN+ ++ + +R F + +
Sbjct: 166 NNFNELYNNATPQLEKLASFQSLPPVKRRFVNWDQNTAQFSHALRQYGHFGIL---ISLD 222
Query: 243 NKHERIKLLESQLVEGEGKPGEVI-NPNFT--IACSQGAVRIMR 283
N +E + G +I IA + G V + +
Sbjct: 223 NALYIANDVEVTTFSHDFTCGSIIFEDALIKSIAINDGYVVLSK 266
>gi|224417978|ref|ZP_03655984.1| methionyl-tRNA formyltransferase [Helicobacter canadensis MIT
98-5491]
gi|313141521|ref|ZP_07803714.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313130552|gb|EFR48169.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 211
Score = 48.3 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 84/220 (38%), Gaps = 23/220 (10%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS----SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ 56
M ++VF+G + L L + + I++V T RG++ + + +
Sbjct: 1 MK-KIVFLGAKKIGFECLAQLFARQKELDYEIIAVGTS------HRGVE-----IKEFCK 48
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
++ + + L V Y L++ Q +N + +N H + LP +
Sbjct: 49 AHNIKEIQNLDDLLKLDFDLLF-------SVQYHLILQQEHINCAREIAFNLHLAPLPEY 101
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RG AI+ D+E G+ + KMD +D+G + F R+ I + L + +
Sbjct: 102 RGCNQFSFAILNEDSEFGVTLHKMDCGIDSGDIIFERRFAIPKDCFVGELVELANQEGLQ 161
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFC 216
E + L +PQ + + E + E C
Sbjct: 162 LFCEKLPYLINGEYEFTPQSDCVVLKREFHYRREIEALKC 201
>gi|115733109|ref|XP_781219.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115946881|ref|XP_001182226.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 1229
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/224 (9%), Positives = 52/224 (23%), Gaps = 5/224 (2%)
Query: 41 RRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADV----AVVVAYGLVIPQR 96
RRG K S + ++ +PA + + + + F A+ +I
Sbjct: 123 RRGYKEQGSYAKELYRQAGIPANTKCGIEEIQKFERTEFMANYRVVVVSREHLDFIIYAG 182
Query: 97 ILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKV 155
+ H + +N K D + +
Sbjct: 183 PEEREHTIYLYAHDGHYDLITSMSAFYEKSYFCENCFKGYDSKYDHVCYNACKLCRSNDC 242
Query: 156 PISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNF 215
P + + L Q + + + +
Sbjct: 243 PPPREEEEDYKHCKRCNRNFKNQHCFENHLSHKTCERYFQCDLCGILCSNVQLKKRKKKH 302
Query: 216 CRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGE 259
+ P +++ ++++ + E EGE
Sbjct: 303 ICGQTMCKICRDFVDPGHQCYIQSENPFENQKPMIDEEYETEGE 346
>gi|253827315|ref|ZP_04870200.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253510721|gb|EES89380.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 243
Score = 48.0 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 44/220 (20%), Positives = 84/220 (38%), Gaps = 23/220 (10%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS----SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ 56
M ++VF+G + L L + + I++V T RG++ + + +
Sbjct: 1 MK-KIVFLGAKKIGFECLAQLFARQKELDYEIIAVGTS------HRGVE-----IKEFCK 48
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
++ + + L V Y L++ Q +N + +N H + LP +
Sbjct: 49 AHNIKEIQNLDDLLKLDFDLLF-------SVQYHLILQQEHINCAREIAFNLHLAPLPEY 101
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RG AI+ D+E G+ + KMD +D+G + F R+ I + L + +
Sbjct: 102 RGCNQFSFAILNEDSEFGVTLHKMDCGIDSGDIIFERRFAIPKDCFVGELVELANQEGLQ 161
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFC 216
E + L +PQ + + E + E C
Sbjct: 162 LFCEKLPYLINGEYEFTPQSDCVVLKREFHYRREIEALKC 201
>gi|330861106|emb|CBX71372.1| bifunctional polymyxin resistance protein aRNA [Yersinia
enterocolitica W22703]
Length = 585
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 55/217 (25%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 106 YNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAG 165
+N H SLLP++RG API A++ G+ ETG+ + +M K D GPV KV IS +
Sbjct: 9 FNLHGSLLPKYRGRAPINWALVNGETETGVTLHQMVKKADAGPVVGQHKVMISGSDTALT 68
Query: 166 LQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNH 225
L ++ + + + K++ +LPL PQ E+ +Y + + + +++ +SA ++N
Sbjct: 69 LHAKMRDAANELLRDLLPKMKNASLPLEPQKESEASYFGRRTADDGAIDWQKSALAINNL 128
Query: 226 IR-ALSPFPGAWLEMMIGNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRI 281
+R P+PGA+ + ++ + S+ ++ G V++ + +AC GA+ I
Sbjct: 129 VRAVTEPYPGAFSYLG----QRKLIIWRSRPLDVVHSKLAGTVLSTSPLVVACGDGALEI 184
Query: 282 MRLQRAGGRVLDIGD--FLLGCPVI------IGCIVG 310
+ Q + ++ G + G +G
Sbjct: 185 ITGQ--------GEEGLYVQGSRLAQEMGIVTGIRLG 213
>gi|163847565|ref|YP_001635609.1| formyl transferase domain-containing protein [Chloroflexus
aurantiacus J-10-fl]
gi|222525417|ref|YP_002569888.1| formyl transferase domain-containing protein [Chloroflexus sp.
Y-400-fl]
gi|163668854|gb|ABY35220.1| formyl transferase domain protein [Chloroflexus aurantiacus
J-10-fl]
gi|222449296|gb|ACM53562.1| formyl transferase domain protein [Chloroflexus sp. Y-400-fl]
Length = 296
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 53/278 (19%), Positives = 95/278 (34%), Gaps = 23/278 (8%)
Query: 3 LRVVFMGTS-EFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE---- 57
+R+V A+ LQ L+ ++ + P PAG A+
Sbjct: 1 MRIVLFAIPGPMALPVLQGLLRLPVEVIGLV--HPAPAGMP--ALTQLPAAAPARNPTLL 56
Query: 58 -----------FSLPAL-VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGF 105
+P V E EQ D+A+V + IP +L + G+
Sbjct: 57 APATAATIADAAGIPRYAVRRDAIAEIGEQLRRQKVDLAIVACWPWRIPAALLEIPRYGW 116
Query: 106 YNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAG 165
N H S LP RG P+ A+ G T + + MD D GP+ +
Sbjct: 117 LNLHPSPLPELRGPEPLFWALRLGWTRTAMTLHLMDADFDHGPIVCQEWFDLPPGERLHT 176
Query: 166 LQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNH 225
L+ A + A+ ++ SPQ G +Y + + S + +
Sbjct: 177 LETLAGQCAATMLPTALSQITSAEWRPSPQ-AAGGSYFPSPRTQDFVLTAEWSVQRAYAF 235
Query: 226 IRALSPFPGAWLEMMIGNKH-ERIKLLESQLVEGEGKP 262
+RA++ + + ++ + + +E Q + P
Sbjct: 236 VRAIAEWGIPFTFIVADGQRVQITDAVEYQPHKHLAMP 273
>gi|297560461|ref|YP_003679435.1| formyl transferase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296844909|gb|ADH66929.1| formyl transferase domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 456
Score = 47.6 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 94/275 (34%), Gaps = 10/275 (3%)
Query: 14 AVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEY 73
V L+ L + V + P A G A LP L E
Sbjct: 16 GVPALEELCARGFPPGLVVSHPAELAHCSGYHDY----GALADRLGLPHLRAALDSGEVR 71
Query: 74 EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNET 133
E D+ VV + +P+ +L++ LG H + LP RG API I+ +
Sbjct: 72 EALTFHGIDLMVVAGWSGTVPEEVLSSLALGGVGLHPAPLPVGRGRAPIPWTILRDMRSS 131
Query: 134 GIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLS 193
+ + ++ +G + ++ + AGL + + +L A +V M+ L + P
Sbjct: 132 AVTLFHIEGEEHSGDIVDQAWFDVAPDATAAGLYERVGLLQAELLVRHMEGLLEGTAPRR 191
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLES 253
PQ + + + ++ P+PGA+ L
Sbjct: 192 PQSGHASVWPRRRPSDGHLDLTASGSDVDRMVRALAEPYPGAFAMFGSARITLCSGRLVG 251
Query: 254 QLVEGEGKPGEVINPN----FTIACSQGAVRIMRL 284
+ G +V+ + I C GAV + +
Sbjct: 252 GVAGGAPG--QVVATGRGREWGITCGDGAVFVPEV 284
>gi|239996102|ref|ZP_04716626.1| methionyl-tRNA formyltransferase [Alteromonas macleodii ATCC 27126]
Length = 278
Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 108/284 (38%), Gaps = 21/284 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++V+ G F+ L L+ + +I V+ ++ S + + +++++
Sbjct: 1 MKIVYFGNDLFS-NCLLLLIKNRLNIERVF--------INDVQENASFIKRICRKYNI-V 50
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
K + +L+ V VV YG +P + N H SLLP+ RG P+
Sbjct: 51 YSTEKPSIVTLKGYLNDEQTVFVVADYGYKVPTNEIKY----AINIHPSLLPKSRGPTPL 106
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
I G++I K+ + LD G + K + +N + L + +L + E +
Sbjct: 107 TYIIDNP-ENAGVSIHKLTEKLDAGSILIQEKFEVENNETISSLMVKSQLLAETLLEELL 165
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ + +PQ+E ++ VN+ ++ + +R F + +
Sbjct: 166 NNFNELYNNATPQLEKLASFQSLPPVKRRFVNWDQNTAQFSHALRQYGHFGIL---ISLD 222
Query: 243 NKHERIKLLESQLVEGEGKPGEVI-NPNFT--IACSQGAVRIMR 283
N +E + G +I IA + G V + +
Sbjct: 223 NALYIANDVEVTTFSHDFTCGSIIFEDALIKSIAINDGYVVLSK 266
>gi|163783188|ref|ZP_02178182.1| hydrogenase regulation HoxX [Hydrogenivirga sp. 128-5-R1-1]
gi|159881522|gb|EDP75032.1| hydrogenase regulation HoxX [Hydrogenivirga sp. 128-5-R1-1]
Length = 564
Score = 47.6 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 76/194 (39%), Gaps = 9/194 (4%)
Query: 100 ATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISS 159
+ H + RG + + AI+ G+ G+++++ D+ D G + R+ P+
Sbjct: 65 WRRYKTLIVHPG-VREDRGPSALDWAIVRGERVWGVSLIEADEEYDAGDIWAWREFPMRF 123
Query: 160 NINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSA 219
++ + E++ ++EA++K E N PQ E + S
Sbjct: 124 ARKSSIYRNEVTEAAVECVLEAVEKFESGNFKPEPQREGRWNPRMEQSVRRI----EWEK 179
Query: 220 ENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEG-EGKPGEVI---NPNFTIACS 275
++ + +R + + E + L + E +G PGEV+ + +
Sbjct: 180 DSTEDVLRKIYASDSQPGVLDDRVFGEEVFLYNAYPEEELKGSPGEVLARRDEAVCVGTR 239
Query: 276 QGAVRIMRLQRAGG 289
GAV I ++R G
Sbjct: 240 DGAVWITHVRRRGK 253
>gi|57505578|ref|ZP_00371505.1| methionyl-tRNA formyltransferase, putative [Campylobacter
upsaliensis RM3195]
gi|57016125|gb|EAL52912.1| methionyl-tRNA formyltransferase, putative [Campylobacter
upsaliensis RM3195]
Length = 254
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 51/238 (21%), Positives = 99/238 (41%), Gaps = 12/238 (5%)
Query: 52 HKKAQEFSLPALVPTKLGQEEYEQ-FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
K AQ+F++P V + E+ + SF ++ V +++ + RIL + + N HA
Sbjct: 4 QKLAQKFAIPHFVCEDINNEKSLRLIESFKPNLLVSMSFDQIFKARILKSYEGRIINCHA 63
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL 170
S LP +RG + ++ + E G+++ +D +DTG + + IS + + L +
Sbjct: 64 SKLPFYRGRNNLNWVLINDEKEFGVSVHFIDSGVDTGDIILQKSFSISDEDDYSTLLKRA 123
Query: 171 SVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALS 230
CA + EA+ + Q + R N + A +
Sbjct: 124 YKACAFLLYEAVLLFLNPPVKSYSQAGFVCKRRGSGDELIDWSLNTRELFNFIRALNAQN 183
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLVEGE--GKPGEVI---NPNFTIACSQGAVRIMR 283
A++ IKL +S++++ E G GE++ N F + GA+++
Sbjct: 184 LGASAFIN------GVLIKLYKSEILKQEFKGAVGEIVSVSNEGFVVCTKDGALKMTH 235
>gi|37528639|ref|NP_931984.1| hypothetical protein plu4830 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36788078|emb|CAE17202.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 390
Score = 47.2 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 93/268 (34%), Gaps = 21/268 (7%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSI--VSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+V G + AV L L+ ++I ++V G + ++ K+A E ++P
Sbjct: 2 IVIAGKNNIAVHVLN-LLKIKYNIKNLAVVIN----KTDSGNNTWQYSLKKRANEINVPI 56
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + ++ ++ +I +N H SLLP+++G
Sbjct: 57 I-----------SLEEAERNASIFLSLEFDQLIKIGRFRTKKIFNIHFSLLPKYKGMYTS 105
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM-VEA 181
I+ + TG+++ +D +DTG + + I + + +
Sbjct: 106 IWPILNNEISTGVSLHYIDNGIDTGEIIDQTTINIDERYTSKDIYLNYISHSCTLIEDYI 165
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
++ NN+ +PQ +Y K + + + + + +
Sbjct: 166 EKIIKNNNIFSNPQKSKHSSYYSKNTISFSSESINLHKTAWEIGRYIRAFSFREYQ--LP 223
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPN 269
++ E + G+PG +I N
Sbjct: 224 HYQNTNYCNYEITSIRSSGRPGALIKDN 251
>gi|328479831|gb|EGF48931.1| methionyl-tRNA formyltransferase [Lactobacillus rhamnosus MTCC
5462]
Length = 109
Score = 46.8 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 23/67 (34%), Gaps = 6/67 (8%)
Query: 240 MIGNKHERIKLLESQL--VEGEGKPGEVI---NPNFTIACSQGA-VRIMRLQRAGGRVLD 293
+ +R KL G V+ IA + + +I LQ AG
Sbjct: 26 YVYMNGQRTKLWAITPLTATTNLPAGSVVARSKHQLVIAAGEQSTFQIDELQPAGKSKQH 85
Query: 294 IGDFLLG 300
I D+L G
Sbjct: 86 IADYLNG 92
>gi|187731066|ref|YP_001881078.1| bifunctional polymyxin resistance arnA protein [Shigella boydii CDC
3083-94]
gi|254806290|sp|B2TW38|ARNA_SHIB3 RecName: Full=Putative bifunctional polymyxin resistance protein
ArnA; Includes: RecName:
Full=UDP-4-amino-4-deoxy-L-arabinose formyltransferase;
AltName: Full=ArnAFT; AltName: Full=UDP-L-Ara4N
formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|187428058|gb|ACD07332.1| bifunctional polymyxin resistance arnA protein [Shigella boydii CDC
3083-94]
Length = 526
Score = 46.8 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 54/145 (37%), Gaps = 4/145 (2%)
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L + + + ++ N+ Q EN T + + ++ + + + A +HN +
Sbjct: 28 HHKLCHAARQLLEQTLPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMV 87
Query: 227 R-ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRL 284
R P+P A+ + + +PG VI+ IAC GA+ I+
Sbjct: 88 RAVADPWPSAFSYVGNQKFTVWSS--RVHPHASKAQPGSVISIAPLLIACGDGALEIVTG 145
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
Q G + ++ G +
Sbjct: 146 QAGDGITMQGSQLAQTLGLVQGSRL 170
>gi|302669619|ref|YP_003829579.1| formyltransferase domain-containing protein [Butyrivibrio
proteoclasticus B316]
gi|302394092|gb|ADL32997.1| formyltransferase domain-containing protein [Butyrivibrio
proteoclasticus B316]
Length = 274
Score = 46.8 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 51/286 (17%), Positives = 99/286 (34%), Gaps = 21/286 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V ++G + L +L + I+ ++T + + + A ++P
Sbjct: 7 MKVAYVG-IDILYPVLTSLYDTGCDIIKIFT-----CKTDNITEFNTKTIEFANSHNIPL 60
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + Y+ + V Y + L N H +LLP RGA P+
Sbjct: 61 QINKITQDDLYDLVANGCEFVLFGGYYYRIPVIDEL-----RIVNTHPALLPLGRGAWPM 115
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
I+ G NE+G+ + KM LD G V KVP+ + + L Q + + +
Sbjct: 116 PLTILKGLNESGVTMHKMVLALDEGDVILQEKVPVFPDDDLITLTQRQWSVIPKMVNTLV 175
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ PQ+ + T + + F +
Sbjct: 176 SDFDNLWNSAKPQVGQAEYWEMPEESEYTVTDQMNFDKADLILRA----FLSYECFYINT 231
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPNF--TIACSQGAVRIMRLQR 286
+E+ +++ + +G PG N + I G V R++R
Sbjct: 232 TANEKYEMIGATAHKGNA-PGSSCNTHVFPLI---DGYVLCDRVRR 273
>gi|242309496|ref|ZP_04808651.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239524067|gb|EEQ63933.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 210
Score = 46.4 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 48/220 (21%), Positives = 87/220 (39%), Gaps = 23/220 (10%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS----SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ 56
M +VVF+G + + L+ + + IV+V T +RG++ + +
Sbjct: 7 MK-KVVFLGAKKIGLKCLEEMFARQRELDFEIVAVGTS------QRGVEIQ-----EFCK 54
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ + + + D+ V Y L++ Q ++ + +N H + LP +
Sbjct: 55 KHLIK-------EIQSLDDLFELEFDLLFSVQYHLILTQAHIDCAREMAFNLHLAPLPEY 107
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAH 176
RG AI+ D+E G+ + KMD +D+G + F R+ I N L + +
Sbjct: 108 RGCNQFSFAILNEDSEFGVTLHKMDSGIDSGDIVFERRFVIPKNCFVDELVELANQKGLE 167
Query: 177 AMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFC 216
E + KL + L PQ E E + E C
Sbjct: 168 LFREKLSKLINGDYLLKPQDECEAIRREFHYRNEIESLKC 207
>gi|253701207|ref|YP_003022396.1| formyl transferase [Geobacter sp. M21]
gi|251776057|gb|ACT18638.1| formyl transferase domain protein [Geobacter sp. M21]
Length = 242
Score = 46.4 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 39/236 (16%), Positives = 82/236 (34%), Gaps = 14/236 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+ ++ G L L H+I V+T + ++ + ++P
Sbjct: 1 MNIILCGYHWTGCKALDLLDKQGHNI-FVFTHE--------SPYYVPSLSALCIDRNIPF 51
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + L F DV V Y +I ++++ +N H S+LP++RG + +
Sbjct: 52 -----SYENISKAKLPFVPDVICSVYYRYIISTKVISCCDGKIFNLHPSILPKYRGCSSV 106
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
AI+ + ETG + +D DTG + + + I + L + +A+
Sbjct: 107 TWAIINNEQETGFSYHYIDSGCDTGNIILQKPIKIENWDTQLSLFNRVMFHSMLFFDKAL 166
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + + ++ G N+ + P+P A
Sbjct: 167 EMVVSGFEGIQQTGDSSFYKRGCPYNGVINGNWEIAYIERFIRAMYNPPYPPAIFN 222
>gi|237753102|ref|ZP_04583582.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229375369|gb|EEO25460.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 252
Score = 46.4 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 22/197 (11%)
Query: 4 RVVFMGTSEFAVATLQALVSS----SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
R+VF+G E L+ L +++V T RG+ V + A+
Sbjct: 10 RIVFLGAKEIGKQCLEMLFKKQKDLDFKLIAVGTS------SRGVG-----VREFAEAKG 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P ++ LS D+ V Y ++ Q + K +N H + LP +RG
Sbjct: 59 IP-------MIKDLSVLLSLEFDILFSVQYHAILTQEQIECAKEIAFNLHLAPLPEYRGC 111
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AI+ D E G+ I ++ K +D+G + F ++ I + L + ++
Sbjct: 112 NQFSFAILNEDREFGVTIHRLAKGIDSGDIIFQKRFEIPKDCFVDELVELANIEGFKLFC 171
Query: 180 EAMDKLEQNNLPLSPQI 196
E+++K+ + L PQ
Sbjct: 172 ESLEKMLKGEYGLIPQD 188
>gi|159029398|emb|CAO90774.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 280
Score = 46.4 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 49/258 (18%), Positives = 106/258 (41%), Gaps = 9/258 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ F+ + +A ++ + + V T A + + V Q+ +
Sbjct: 1 MKFAFVTCVQLGLACMETIYEQGGKLDLVITLKDNLAQDKSGRIY---VDSFCQQRGIEV 57
Query: 63 LVPTKLGQEEYEQF-LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ + E Q D ++ + + +L A K G H +LLP RG A
Sbjct: 58 VKIRSVNAPEVIQSLQEREIDWLFIIGWSQIAKPPVLQAVKRGVLGMHPTLLPVGRGRAS 117
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I AI+ G ETG+++ ++D+ +DTGP+ K+ I+++ L Q +++ +
Sbjct: 118 IPWAIIKGLPETGVSLFQLDEGVDTGPILAQEKLAIAADETATTLYQRVAIAHQQLIGRI 177
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMM 240
+L + L PQ ++ T + + ++ + V +R P+PGA+ +
Sbjct: 178 WPELISDRLQPRPQDDSQATEWPGRTPEDGQIYPTMTVTEVDRLVRATTHPYPGAFWK-- 235
Query: 241 IGNKHERIKLLESQLVEG 258
+ + I++ + +
Sbjct: 236 --EQDQMIRIWRGAIGKS 251
>gi|297516699|ref|ZP_06935085.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli OP50]
Length = 221
Score = 46.4 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 4/117 (3%)
Query: 195 QIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIGNKHERIKLLES 253
Q EN T + + ++ + + + A +HN +R P+PGA+ +
Sbjct: 14 QRENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVADPWPGAFSYVGNQKFTVWSS--RV 71
Query: 254 QLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ +PG VI+ IAC GA+ I+ Q G + ++ G +
Sbjct: 72 HPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQTLGLVQGSRL 128
>gi|291288396|ref|YP_003505212.1| formyl transferase domain protein [Denitrovibrio acetiphilus DSM
12809]
gi|290885556|gb|ADD69256.1| formyl transferase domain protein [Denitrovibrio acetiphilus DSM
12809]
Length = 293
Score = 46.4 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 89/222 (40%), Gaps = 10/222 (4%)
Query: 74 EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNET 133
L +D +V + + H SLLP +RG + + + G +
Sbjct: 64 CDKLQDISDRTIVCVDWTKDFFKDAELVGMDVIFAHPSLLPAYRGYSAVTEQFVRGVTVS 123
Query: 134 GIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLS 193
G + K +D G + ++ I ++ + CA +VE K
Sbjct: 124 GASFYKQGNRIDAGDIIHSAEIRIGYQDYPDDFLRKYASACADFIVELNKKGVDAY-EAV 182
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLES 253
PQ E+ Y ++ ++ ++F R A +++NHIR + + ++ +++ + +
Sbjct: 183 PQNEDMSFYLQRKRGKDSIIDFNRDAFSLYNHIRG---YSRPFFGAYYMSEGKKVNVWRA 239
Query: 254 --QLVEGE-GKPGEVI---NPNFTIACSQGAVRIMRLQRAGG 289
++ +G+ G PGEV+ + IAC G + ++ G
Sbjct: 240 FTEVWQGDYGCPGEVLSVTDNGAEIACGSGTITFKEVEIDGK 281
>gi|3451484|emb|CAA07640.1| putative formyl transferase [Bordetella bronchiseptica]
Length = 274
Score = 46.0 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 48/255 (18%), Positives = 93/255 (36%), Gaps = 9/255 (3%)
Query: 32 YTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGL 91
+ +P S + V + ++PA+ + + + D+ VV +
Sbjct: 1 ISYSDKPVAI----SRQADVAQWCVAHAIPAIEYAGVDKSVEHFRNNPA-DLCVVAGWYH 55
Query: 92 VIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAF 151
++P R+ + +LG HAS LP RG AP+ AI+AG T + + + +D GPV
Sbjct: 56 MLPSRLRDLFRLGAVGLHASRLPELRGGAPLNWAILAGFERTAVTLFALGDGVDDGPVYG 115
Query: 152 MRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGET 211
+ + N L + + + + +L + Q A++ +
Sbjct: 116 QEAIDVGPNDYIGELVARCNAASVVLVERCISGILDGSLVPAVQDGVASYGAQRSPEDGV 175
Query: 212 RVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NP 268
+A P+PGA + + E + G PG+++
Sbjct: 176 IDWAAPAAGIARLVRAVSRPYPGASTWLDGRLVR-IWRAGEYRAAAVYGAPGQILCLPGG 234
Query: 269 NFTIACSQGAVRIMR 283
+A +GA+ I
Sbjct: 235 QVVVATGKGAIEIEE 249
>gi|155061086|gb|ABS90476.1| NRPS [Streptomyces albus]
Length = 1196
Score = 46.0 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 54/288 (18%), Positives = 92/288 (31%), Gaps = 25/288 (8%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
V +G + L++ H + +V + P G R + A L + P
Sbjct: 8 VLIGEQPLLAECGEHLLTRGHQVAAVVARDP---GLR----------RWAAGHGLRVVEP 54
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
+ E V ++P +L + N H +LLPR G A
Sbjct: 55 GRGLAERLRP---LRFAYLFSVTNLRMLPDDVLALPERMPVNFHDALLPRHAGLHATSWA 111
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
++ G E G+ M++ DTG V R VP+ + L A E +D+L
Sbjct: 112 VLEGAAEHGVTWHVMEREADTGDVLKQRAVPVGPDDTAYTLNLACYEAAAATFGELVDEL 171
Query: 186 EQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL----SPFPGAWLEMMI 241
+PQ TY F P A+ ++
Sbjct: 172 ASGTETRTPQDLALRTYHGLHDGPPDGGLFSWRRPAADLVALVRATDLGPHRNAFGLALL 231
Query: 242 GNKHERIKLLESQLVE--GEGKPGEVI---NPNFTIACSQGAVRIMRL 284
+ ++++ + PG V+ P +A + VR+ L
Sbjct: 232 ALDERLFAVRKAEVTDDPSTSPPGTVVAVEGPAVVVATTDLDVRLTEL 279
>gi|333016484|gb|EGK35815.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
K-304]
Length = 471
Score = 46.0 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 55/145 (37%), Gaps = 4/145 (2%)
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L + + + ++ N+ Q EN T + + ++ + + + A +HN +
Sbjct: 18 HHKLCHAARQLLEQTLPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMV 77
Query: 227 R-ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRL 284
R P+PGA+ + + +PG VI+ IAC GA+ I+
Sbjct: 78 RAVADPWPGAFSYVGNQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTG 135
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
Q G + ++ G +
Sbjct: 136 QAGDGITMQGSQLAQMLGLVQGSRL 160
>gi|163868490|ref|YP_001609699.1| phosphoribosylglycinamide formyltransferase [Bartonella tribocorum
CIP 105476]
gi|161018146|emb|CAK01704.1| phosphoribosylglycinamide formyltransferase [Bartonella tribocorum
CIP 105476]
Length = 203
Score = 46.0 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 27/179 (15%)
Query: 1 MTLRVVFM----GTSEFAVATLQALVSSSH--SIVSVYTQPPRPAGRRGLKSVLSAVHKK 54
M ++V G++ A+A QA + IV+V PR G +K
Sbjct: 1 MKKKIVVFISGNGSNMVALA--QASQQKGYPAKIVAVICDNPRANGI-----------EK 47
Query: 55 AQEFSLPALVPTKLGQEEYEQFLS--------FNADVAVVVAYGLVIPQRILNATKLGFY 106
AQ +LP V + + E+ + D Y +I R + +
Sbjct: 48 AQNHNLPIHVVDRKIYKTKEEHEEDIFTILDQYKPDFLCFAGYMRLISSRFVKLYEGRIL 107
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAG 165
N H SLLP ++G +R + AG TG + + + +D G + VP+ + +T
Sbjct: 108 NIHPSLLPSFKGLNTHERVLRAGVKITGCTVHLVTEDMDAGKILAQAAVPVYPDDSTEC 166
>gi|328350276|emb|CCA36676.1| methionyl-tRNA formyltransferase [Pichia pastoris CBS 7435]
Length = 347
Score = 45.6 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 52/305 (17%), Positives = 103/305 (33%), Gaps = 26/305 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVS---SSHSI--VSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
L+V + G+ F++ L L++ H I + + + + GR + + + + A+
Sbjct: 34 LKVAYFGSDFFSIRCLDHLMNLSFKQHHIGTLDLIAKHSKRGGRGNKQILETPIVSYAKL 93
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
L L K + E + + D+A+ V+YG +IPQ L + + G N H SLLP++
Sbjct: 94 KQLNILRAEKNSE--IESLSANSYDLAIAVSYGKLIPQTFLKSLRYGGLNVHPSLLPKYS 151
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
G AP+Q I+ GD+ TG+ + + ++V ++ + L
Sbjct: 152 GPAPLQHTILNGDSVTGVTVQALHPTTFDKGSVLKQEVCHDYRPDSETTESLGLKLADLG 211
Query: 178 MVEAMDKLEQNNLP-LSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW 236
D ++ + P+ K + I G
Sbjct: 212 GPLLSDVVKFTFDNLILPEPVETSNEYSYAPKPSPSLYQINWNVLSTTEIIRRFNALGPL 271
Query: 237 LEMMIGNKHERI-----------KLLESQLVEGEG-----KPGEV--INPNFTIACSQGA 278
+ ++ K+ + PG + I G
Sbjct: 272 YTFKHCHVVKKPPFTGLKRVILDKISPIADISSNLSAELTTPGMFTSVEDGLIIKSLDGY 331
Query: 279 VRIMR 283
++
Sbjct: 332 IKFTE 336
>gi|299134307|ref|ZP_07027500.1| formyl transferase domain protein [Afipia sp. 1NLS2]
gi|298591054|gb|EFI51256.1| formyl transferase domain protein [Afipia sp. 1NLS2]
Length = 202
Score = 45.6 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVY 32
MTLR+ G+ F V TL+ L++ I V
Sbjct: 1 MTLRITLAGSRHFGVKTLEMLLAHGVEIAGVI 32
>gi|294635680|ref|ZP_06714152.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Edwardsiella tarda ATCC 23685]
gi|291090961|gb|EFE23522.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Edwardsiella tarda ATCC 23685]
Length = 504
Score = 45.6 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 4/145 (2%)
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L + EA+ ++ N PQ E+ TY + + + R+ + + A ++N +
Sbjct: 7 HHKLCQCAKTLLAEALPQIRSGNYSEYPQDESAATYVGRRTPADGRIEWNKPARTLYNLV 66
Query: 227 R-ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRL 284
R P+PGA+ + L +PG V++ +AC Q A+ I+
Sbjct: 67 RAVSEPWPGAFSYAGNRQFTLWQARVRHDL--PAARPGTVLSTAPLVVACGQDALEIVAG 124
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
Q G + ++ G I+
Sbjct: 125 QPQDGLYMQGSQLAESLGLVEGAIL 149
>gi|145493284|ref|XP_001432638.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399751|emb|CAK65241.1| unnamed protein product [Paramecium tetraurelia]
Length = 329
Score = 45.6 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 63/304 (20%), Positives = 117/304 (38%), Gaps = 34/304 (11%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSV------YTQPPRPAGRRGLKSVLSAVHKKAQ 56
++ +F G+ F + Q L H + ++ T P + + A
Sbjct: 1 MKTIFFGSGLFPLPIFQRL----HKLAAIDPKLSLITVP------NHSHKEKNQIKDYAA 50
Query: 57 EFSLPALVPT-KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ P + Q + D+ +V YG +IP +I++ G Y H SLLP+
Sbjct: 51 QQQFKIYQPNLSDKTNNFVQEIQEKPDLGIVCNYGYMIPSQIIDIFNKGVYVIHPSLLPK 110
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+RGAAPIQRAIM + +TG++ +++ K+ +RK ++ +
Sbjct: 111 YRGAAPIQRAIMNDEQKTGVSFIEISKNKFDAGAILLRKEIDILAVDRYKELSQKLSQLT 170
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
VE L Q + T A KI++ + R +F +A ++N R +
Sbjct: 171 ADSVEEFITNLDKFERLG-QNASETTKAPKITQADLRPDFNNTANKIYNQYRGIYGTNFH 229
Query: 236 WLEMMIGNKHER------IKLLESQLVEG--EGKPGEV-------INPNFTIACSQG-AV 279
L++ + LE + ++ + G + NF I C++ +
Sbjct: 230 SLKLKYQEREFYLENITLANDLEIEQLKHFNAAENGTLWLIKSKQFKNNFYIKCNENSWI 289
Query: 280 RIMR 283
R+
Sbjct: 290 RVQE 293
>gi|313143951|ref|ZP_07806144.1| methionyl-tRNA formyltransferase [Helicobacter cinaedi CCUG 18818]
gi|313128982|gb|EFR46599.1| methionyl-tRNA formyltransferase [Helicobacter cinaedi CCUG 18818]
Length = 256
Score = 45.6 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 13/163 (7%)
Query: 3 LRVVFMGTSEFAVATLQAL-----VSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
+++ F+G EF+ +L L + + IV V T+ +E
Sbjct: 1 MKIFFIGCVEFSYISLHTLITRFHIHNKLEIVGVATKEHSAFNADFCNLAP-----LCEE 55
Query: 58 FSLPALVPTKLGQEEY-EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+P + + + S DV + +I + +L H + LP
Sbjct: 56 SHIPFIYTKDINSPATLDFIHSCKPDVIYCFGWSSLIKKELL--DSYPIIGYHPAALPHN 113
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISS 159
RG PI A++ G ++ M++ D+G + I+
Sbjct: 114 RGRHPIIWALVLGLKQSASTFFLMEEGADSGAIISQVPFNINF 156
>gi|242278066|ref|YP_002990195.1| formyl transferase domain protein [Desulfovibrio salexigens DSM
2638]
gi|242120960|gb|ACS78656.1| formyl transferase domain protein [Desulfovibrio salexigens DSM
2638]
Length = 272
Score = 45.6 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 72/198 (36%), Gaps = 17/198 (8%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSH----SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
++ FMG A ++L+ IV V + P G+++V S E
Sbjct: 6 PKKIFFMGRKLVATECFRSLLDLHISGEVHIVGVLSSP---HVLDGVENVPS----LCAE 58
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+ +P L + + D+ + V +G ++ + L N H + LP +R
Sbjct: 59 YEVPILSSLDDFLKV------DDVDILISVQFGEILKRVHLEKALEINVNLHMAPLPEYR 112
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
G AI+ G G + +D+ +D G + F ++ PI + L
Sbjct: 113 GCNQFSHAILDGKKIFGTTLHVIDEQIDHGDILFEKRFPIPEDCWVEELYSMTLSASIGL 172
Query: 178 MVEAMDKLEQNNLPLSPQ 195
E++ L PQ
Sbjct: 173 FRESIRPLVAGEYRCVPQ 190
>gi|118578503|ref|YP_899753.1| methionyl-tRNA formyltransferase [Pelobacter propionicus DSM 2379]
gi|118501213|gb|ABK97695.1| Methionyl-tRNA formyltransferase [Pelobacter propionicus DSM 2379]
Length = 311
Score = 45.6 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 64/322 (19%), Positives = 114/322 (35%), Gaps = 27/322 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ + + L+AL S + P L V ++A+ L
Sbjct: 1 MRIAVLCSGSVLQPVLEALYSQG---LLAGVAVPAAPAVEDPNLALETVLRQARVSCLRV 57
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L + S AD + + +P +L LG YN H LP++RG P+
Sbjct: 58 -DNGDLTGQMAPWLRSLAADALCCMGFPRKLPADLLTMPPLGCYNFHGGPLPQYRGPDPV 116
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
I + I + +M +D+G +A +PI ++ Q L M+E +
Sbjct: 117 FWQIRNREVAGAITVHRMTPRIDSGAIAHEAHLPIGTDDTYGLWMQRLGGALPRVMIEFV 176
Query: 183 DKLEQN--NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+L + +PL Q Y + + + +++ A + +RA +P G L +
Sbjct: 177 QQLAIHGAAVPLREQDPETGRYFPRPTDADRTIDWSWGASAIDALVRACNPVYGGALTTL 236
Query: 241 IGNKHERIKLLESQLVE----GEGKPGEVI----NPNFTIACSQGAVRIMRLQ--RAG-- 288
++LLE + GE G V+ +AC G + + L G
Sbjct: 237 ---HGVPVRLLEVSPLPAQAGGESTSGTVVTADAAEGLRVACGTGELLRLELLYGMEGFF 293
Query: 289 -GRVLDIGDFLLGCPVIIGCIV 309
G L + G +
Sbjct: 294 SGPRL-----ARIFGLKPGQRL 310
>gi|24113631|ref|NP_708141.1| hypothetical protein SF2334 [Shigella flexneri 2a str. 301]
gi|30063686|ref|NP_837857.1| hypothetical protein S2467 [Shigella flexneri 2a str. 2457T]
gi|24052690|gb|AAN43848.1| putative transformylase [Shigella flexneri 2a str. 301]
gi|30041941|gb|AAP17667.1| putative transformylase [Shigella flexneri 2a str. 2457T]
gi|281601698|gb|ADA74682.1| Bifunctional polymyxin resistance protein arnA [Shigella flexneri
2002017]
gi|313651079|gb|EFS15478.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
2a str. 2457T]
gi|332755305|gb|EGJ85669.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
K-671]
Length = 516
Score = 45.6 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 55/145 (37%), Gaps = 4/145 (2%)
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L + + + ++ N+ Q EN T + + ++ + + + A +HN +
Sbjct: 18 HHKLCHAARQLLEQTLPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLHNMV 77
Query: 227 R-ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRL 284
R P+PGA+ + + +PG VI+ IAC GA+ I+
Sbjct: 78 RAVADPWPGAFSYVGNQKFTVWSS--RVHPHASKAQPGSVISVAPLLIACGDGALEIVTG 135
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIV 309
Q G + ++ G +
Sbjct: 136 QAGDGITMQGSQLAQMLGLVQGSRL 160
>gi|320174983|gb|EFW50098.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella dysenteriae CDC 74-1112]
Length = 441
Score = 45.6 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 3/80 (3%)
Query: 231 PFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGG 289
P+PGA+ + + +PG VI+ IAC GA+ I+ Q G
Sbjct: 8 PWPGAFSYVGNQKFTVWSS--RVHPHASKAQPGSVISIAPLLIACGDGALEIVTGQAGDG 65
Query: 290 RVLDIGDFLLGCPVIIGCIV 309
+ ++ G +
Sbjct: 66 ITMQGSQLAQTLGLVQGSRL 85
>gi|72106259|ref|XP_791223.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115925276|ref|XP_001184365.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 195
Score = 45.6 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 34/117 (29%), Gaps = 8/117 (6%)
Query: 193 SPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLE 252
PQ E G T KI +++ + + + RA+ +
Sbjct: 57 MPQSEEGATVGLKIPNKLAWIDWGATTQEIDRLYRAIGEQMPLKSLFGEEELRLEQMVSP 116
Query: 253 SQLVEGE----GKPGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
+ + +PG + + C G V + G + + +F G
Sbjct: 117 ADCSDHPIYEGDEPGLISFPQNKSIIYVRCKDGWVGFCSISPIGRKRMTAKEFYNGY 173
>gi|224417955|ref|ZP_03655961.1| methionyl-tRNA(fmet) n-formyltransferase [Helicobacter canadensis
MIT 98-5491]
gi|253827294|ref|ZP_04870179.1| Methionyl-tRNA formyltransferase [Helicobacter canadensis MIT
98-5491]
gi|313141498|ref|ZP_07803691.1| methionyl-tRNA(fMet) N-formyltransferase protein [Helicobacter
canadensis MIT 98-5491]
gi|253510700|gb|EES89359.1| Methionyl-tRNA formyltransferase [Helicobacter canadensis MIT
98-5491]
gi|313130529|gb|EFR48146.1| methionyl-tRNA(fMet) N-formyltransferase protein [Helicobacter
canadensis MIT 98-5491]
Length = 317
Score = 45.3 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 40/286 (13%), Positives = 97/286 (33%), Gaps = 15/286 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAV--HKKAQEFSL 60
+R V +GT+E A + + ++ S H++ +V + + +++ A+E
Sbjct: 1 MRCVVIGTTECARSLAKGILKSGHTLAAVIS-------LKKELLPNNSISLELFAREHG- 52
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ ++ E+ L N + ++V I + + H + LP RG
Sbjct: 53 --ALYFEVSDINQEELLLKNLKMDILVCVWPKILRENIFKIPEITICAHPTELPNNRGRH 110
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV-LCAHAMV 179
+ + + G ++ + ++D +DTG + + + + L ++++ A
Sbjct: 111 ALHWSKVLGLKQSALTFFEVDSGIDTGKIILQKFFELDESDTINTLNDKINILAEAGIQE 170
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ N Q N N+ + P ++
Sbjct: 171 ILNNCELITNRKSQRQGGNYWRKRNLHDVLLDMRMSKEMIINIVKSFCSPYPCAKLIVDD 230
Query: 240 MIGNKHERIKL--LESQLVEGEGKPGEVINPNFTIACSQGAVRIMR 283
+ + E ++ LE + GK + + C G + +
Sbjct: 231 RVIDIQEAYEVQGLECPINIEHGKVFNLSSCEIVAKCENGLIGLKS 276
>gi|328862579|gb|EGG11680.1| hypothetical protein MELLADRAFT_90940 [Melampsora larici-populina
98AG31]
Length = 295
Score = 45.3 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 82/241 (34%), Gaps = 11/241 (4%)
Query: 5 VVFMGTSEFAVATLQALVSSS--HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++F G+ F+ L+ +++ + V T P G RGLK+ V++ AQ + +
Sbjct: 43 LIFFGSDSFSCVVLKEIIARRELWDELHVVTPPIARKG-RGLKN----VYRGAQVDKISS 97
Query: 63 ---LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ P E AD + I N H S LP +RG
Sbjct: 98 SSGVQPEFKPSPELGCTSFKLADHSEWHVTECYERHLIKQFPASHCLNIHPSHLPLYRGP 157
Query: 120 APIQRAIMAGDNETGIAIMKMDKH-LDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
APIQ + N G+ I + D G + + P+ N A + L + M
Sbjct: 158 APIQWQLANQINPVGVTIQDLSPDGFDLGDILAQQSAPLPPNTAYALAESFLGRIGGSLM 217
Query: 179 VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLE 238
+ + L Q T A KI + + + V + + +
Sbjct: 218 CKVLQNLPFLIKTSEKQDSRNATKARKILQTDLAIGSDWDLSKVKSRYLGMGHQVREYTF 277
Query: 239 M 239
+
Sbjct: 278 L 278
>gi|149909847|ref|ZP_01898498.1| methionyl-tRNA formyltransferase [Moritella sp. PE36]
gi|149807179|gb|EDM67135.1| methionyl-tRNA formyltransferase [Moritella sp. PE36]
Length = 293
Score = 45.3 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 47/253 (18%), Positives = 90/253 (35%), Gaps = 7/253 (2%)
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
T + Q S AD+ ++ + +P +LNA G +N HAS LP++RG+ P
Sbjct: 36 IRYQTNQPELVVYQIKSRQADLGLIYTFSHKLPAVVLNAFDGGLFNLHASALPQYRGSMP 95
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ I + E+ ++I+K++ DTG + + + +S + L+ + +
Sbjct: 96 LYWQIRNRETESYLSIIKVEDEFDTGDIMLQQIMTLSPLDTLNSVAHTLAQQAPQFIQDF 155
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
M + + L Q K +E + RA +P +
Sbjct: 156 MTRYANDELTAVAQQGEASNARMPTQKDMLINWKTMKSEEIAAAARAGNPLFNGMTIIWK 215
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN----PNFTIACSQGAVRIMRLQR-AGGRVLDIGD 296
+ ++ + G V++ +A GA+R+ L G V
Sbjct: 216 QSYMGLLQATSIEHPNYGVPAGTVLHIGEPEGVVVATLDGALRLDVLTIAEG--VFSGLA 273
Query: 297 FLLGCPVIIGCIV 309
F + G
Sbjct: 274 FAERFGLDAGMQF 286
>gi|170743551|ref|YP_001772206.1| formyl transferase domain-containing protein [Methylobacterium sp.
4-46]
gi|168197825|gb|ACA19772.1| formyl transferase domain protein [Methylobacterium sp. 4-46]
Length = 288
Score = 44.9 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 96/284 (33%), Gaps = 13/284 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ F G +F +AL + + ++T+P G+ +V A+ +P
Sbjct: 1 MKFAFAG-IDFLGGVFEALAGAGWQPIKLFTRP-----CDGIYDFNDSVVTLARRHRVPI 54
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + D A+VVA + + N H S LP RG P+
Sbjct: 55 QLSRVRPADLDALTQEHGRDWALVVAGYPWLITGWPGRVRY-ALNFHPSPLPTGRGPYPL 113
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
+AI+ G+ + + +++ S T + A +
Sbjct: 114 FKAILDSYETWGVTAHVLAEEGFDTGDILAQELFPLSPGETHETLLARCQIAAMRLAAGP 173
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ +P+ + +Y +++ + ++F + V +RA F +
Sbjct: 174 IARDLPARWRAPEPQGDGSYWPRVTDADRTLDFRQPVAAVLRKVRA---FGTIETVARLN 230
Query: 243 NKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMR 283
+ + + + PG ++ + +A G V+I R
Sbjct: 231 DARVFVAAADGWVEPHRYAPGAIVHRHRRHVLVAARDGFVQITR 274
>gi|227833816|ref|YP_002835523.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
gi|262184758|ref|ZP_06044179.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
gi|227454832|gb|ACP33585.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
Length = 209
Score = 44.9 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 78/203 (38%), Gaps = 13/203 (6%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M ++ G+ F A QAL ++ H+++ P G RG A L
Sbjct: 1 MA-KIYLAGSGAFGAACAQALTNAGHTLLG-IAAPEEGRGGRGEALT-----NWAMSRHL 53
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P L ++ ++ A+ R A H SLLP RG A
Sbjct: 54 PRTSNALLRADDIPDGTD-----LILTAHSHAFVGRKTRARAPYALGYHPSLLPLHRGRA 108
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL-SVLCAHAMV 179
++ + TG I + ++D GP+A R V + ++ + + +E L +V
Sbjct: 109 AVEWTARMNERVTGGTIYHLTDNVDGGPIAAQRHVILPPHLTASEIWREYLFPLGVEMVV 168
Query: 180 EAMDKLEQNNLPLSPQIENGITY 202
+ D ++ N+P PQ E T+
Sbjct: 169 DTADAVDAGNVPYQPQDERKATW 191
>gi|317405273|gb|EFV85603.1| hypothetical protein HMPREF0005_05226 [Achromobacter xylosoxidans
C54]
Length = 273
Score = 44.5 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 45/281 (16%), Positives = 86/281 (30%), Gaps = 26/281 (9%)
Query: 9 GTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKL 68
G V + L++ H I +V + V A + +P
Sbjct: 10 GDGSVLVRCGELLMAKGHRIQAVIS-------------TDLTVRAWAAKAGIP----QYA 52
Query: 69 GQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMA 128
+ + +AD+ + VIP +L + N H LP + G A+
Sbjct: 53 LDDAVKPESRLSADILFSIGNYSVIPDALLERVRRMSINYHYGPLPEYSGLHVPAWAVYD 112
Query: 129 GDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQN 188
+ I ++ + +D G + VPI S L + + +D L
Sbjct: 113 RATDYAITWHRIGEIIDGGGILKRVAVPIESTDTALSLGLKCDETAIQSFGALVDDLAAG 172
Query: 189 NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRAL------SPFPGAWLEMMIG 242
+PQ + Y + S+ + P W + +I
Sbjct: 173 RERETPQDLSRRRYFSRHSQFSAEGLIDWHQDAEQIAAMVRATDHGPFSSPLVWPKALID 232
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPNFT---IACSQGAVR 280
+ ++ + + PG+V+ + IA A+R
Sbjct: 233 GRVLAVRKVSVEARAAGAAPGDVVAVDAFGASIATGNRALR 273
>gi|222109208|ref|YP_002551473.1| peptide synthetase [Agrobacterium vitis S4]
gi|221738482|gb|ACM39347.1| peptide synthetase [Agrobacterium vitis S4]
Length = 3761
Score = 44.5 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 50/294 (17%), Positives = 102/294 (34%), Gaps = 28/294 (9%)
Query: 4 RV---VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
R+ + G A+ Q L+ S H + V T K + V A+ ++
Sbjct: 21 RIRSCIIAGEGTLAIRCAQHLMDSGHHLKGVLTSE---------KVLADWV--YAK--NI 67
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
L + D + +++P ++ K G +N H + LPR+ G
Sbjct: 68 TVLRSVEELA--TLLLDEGPVDWLFSIVNPILLPPNVIARVKGGAFNYHDAPLPRYAGVH 125
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
AI+A + + I+ ++ +D G + R VPI + L + A A E
Sbjct: 126 ATSWAILAEERDYAISWHRISNFVDAGDIVLQRAVPIVDDDTALSLNLKCYQAAAGAFEE 185
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGET----RVNFCRSAENVHNHIRALSPFPGAW 236
+ +L + Q + T+ + + E + N + + P+
Sbjct: 186 LISRLTHGKVESYQQDLSQRTFFSRHDRPEADGILQFNRQAKQLSATVRALSFGPYRINT 245
Query: 237 L---EMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRL 284
++++ + + L+ PG VI + + I+ + + L
Sbjct: 246 FCRPKLLVADIALGVGALDVLDERSTEPPGTVICVDHKGWRISTFDHDILVRNL 299
>gi|146340905|ref|YP_001205953.1| putative methionyl-tRNA formyltransferase [Bradyrhizobium sp.
ORS278]
gi|146193711|emb|CAL77728.1| putative Methionyl-tRNA formyltransferase [Bradyrhizobium sp.
ORS278]
Length = 197
Score = 44.5 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 56/155 (36%), Gaps = 16/155 (10%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQ--PPRPAGRRGLKSVLSAVHKKAQEFSL 60
+R+ +G+ F VATL L I V R + A+ +
Sbjct: 1 MRITLVGSRHFGVATLNMLRDRGIEIARVVVHDGEDR-------------LAAAARSAGI 47
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
V + ++ D+ V + Q + A KLG H SLLPR RG A
Sbjct: 48 EV-VVQADPKVVPASEIAPGTDLIVTAHSHARVSQEAVAAAKLGGIGYHPSLLPRHRGIA 106
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKV 155
++ I GD G I + + +D G +A
Sbjct: 107 AVEWTIKEGDAIAGGTIYHLAERMDAGAIAAQDWC 141
>gi|87311681|ref|ZP_01093797.1| formyltransferase, hypothetical [Blastopirellula marina DSM 3645]
gi|87285575|gb|EAQ77493.1| formyltransferase, hypothetical [Blastopirellula marina DSM 3645]
Length = 236
Score = 44.5 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 40/231 (17%), Positives = 71/231 (30%), Gaps = 14/231 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++++ G L L H + VYT + H +
Sbjct: 1 MKIILCGYHWTGCKALDFLRREGHEV-FVYTH-------------ENPYHVPSLWQYCEK 46
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + L F DV V Y +I ++ A K +N H +LLP +RG + +
Sbjct: 47 TDTPYTLKNISKVPLPFEPDVICSVYYRFIIKPHVIEACKGRIFNLHPALLPNYRGCSSL 106
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
A++ G+ E G +D+ D G + + +PI L + EA+
Sbjct: 107 TWAMINGETEAGYTYHYIDEGTDMGDIIIQQPIPIEDFDTQETLFTRVMYTSMTRFSEAL 166
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
+ E G + + P+P
Sbjct: 167 HHAAKGLPGDQQTGEGSHYPRGCPHDGVIDPAWDERRKERFVRAMIYPPYP 217
>gi|157415401|ref|YP_001482657.1| hypothetical protein C8J_1081 [Campylobacter jejuni subsp. jejuni
81116]
gi|13123736|gb|AAK12957.1|AF343914_10 unknown [Campylobacter jejuni]
gi|157386365|gb|ABV52680.1| hypothetical protein C8J_1081 [Campylobacter jejuni subsp. jejuni
81116]
gi|167412359|gb|ABZ79819.1| unknown [Campylobacter jejuni]
gi|315932280|gb|EFV11223.1| hypothetical protein CSU_0430 [Campylobacter jejuni subsp. jejuni
327]
Length = 272
Score = 44.5 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 38/249 (15%), Positives = 86/249 (34%), Gaps = 12/249 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++ G + AV +LQ ++ + + P + +G+ S ++ K A + ++
Sbjct: 2 IKICIAGKNNIAVNSLQFILKNYFEADQIVVIPNK--NDKGIDSWQKSLLKFALDNNIKI 59
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ ++ E F S D + + +N H S LP+++G
Sbjct: 60 VTLDEIYNIEQIIFFSLEFDQIIKIEN----------FKSDRLFNIHFSALPKYKGVFTS 109
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
I+ + E+G+ + ++D +DTG + PI N L + +
Sbjct: 110 ITPILNNELESGVTLHRIDNGIDTGNIIDQHCFPIDINDTARDLYFNYLKYGESIFKKNI 169
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ N+ Q +Y + + ++ F L ++
Sbjct: 170 QTIINNSYKDLKQTNINSSYFSRKDINLVHKINFKKTSFEIHNQIRAFIFQEYQLPIINN 229
Query: 243 NKHERIKLL 251
+K + L
Sbjct: 230 SKIIKSILA 238
>gi|304409557|ref|ZP_07391177.1| formyltetrahydrofolate deformylase [Shewanella baltica OS183]
gi|307303915|ref|ZP_07583668.1| formyltetrahydrofolate deformylase [Shewanella baltica BA175]
gi|304352075|gb|EFM16473.1| formyltetrahydrofolate deformylase [Shewanella baltica OS183]
gi|306912813|gb|EFN43236.1| formyltetrahydrofolate deformylase [Shewanella baltica BA175]
Length = 291
Score = 44.5 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 64/173 (36%), Gaps = 28/173 (16%)
Query: 2 TLRVVFMGTSEFAVATL-QALVSSSH-----SIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
R+V + T E L L+ + + I +V A+ + A
Sbjct: 95 KKRIVVLVTKE--AHCLGDLLMKAYYGGLSVEIAAVVGNHD-------------ALRELA 139
Query: 56 QEFSLPALVPTKLGQEEYEQFLS-------FNADVAVVVAYGLVIPQRILNATKLGFYNG 108
++F++P + + G + + + + D V+ Y V+ + N
Sbjct: 140 EKFNIPFHLVSHEGLDRIQHEQALLAAVSQYEPDYLVLAKYMRVLTPDFVAQYPNRIINI 199
Query: 109 HASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNI 161
H S LP + GAAP ++A G G ++ LD GP+ +P+ +
Sbjct: 200 HHSFLPAFIGAAPYRQAWERGVKIIGATAHFVNNCLDEGPIIKQDVIPVDHSY 252
>gi|315266834|gb|ADT93687.1| formyltetrahydrofolate deformylase [Shewanella baltica OS678]
Length = 291
Score = 44.5 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 64/173 (36%), Gaps = 28/173 (16%)
Query: 2 TLRVVFMGTSEFAVATL-QALVSSSH-----SIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
R+V + T E L L+ + + I +V A+ + A
Sbjct: 95 KKRIVVLVTKE--AHCLGDLLMKAYYGGLSVEIAAVVGNHD-------------ALRELA 139
Query: 56 QEFSLPALVPTKLGQEEYEQFLS-------FNADVAVVVAYGLVIPQRILNATKLGFYNG 108
++F++P + + G + + + + D V+ Y V+ + N
Sbjct: 140 EKFNIPFHLVSHEGLDRIQHEQALLAAVSQYEPDYLVLAKYMRVLTPDFVAQYPNRIINI 199
Query: 109 HASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNI 161
H S LP + GAAP ++A G G ++ LD GP+ +P+ +
Sbjct: 200 HHSFLPAFIGAAPYRQAWERGVKIIGATAHFVNNCLDEGPIIKQDVIPVDHSY 252
>gi|289064343|gb|ADC80547.1| methionyl-tRNA formyltransferase [Toxoplasma gondii]
Length = 885
Score = 44.5 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 54/244 (22%), Positives = 94/244 (38%), Gaps = 7/244 (2%)
Query: 25 SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP---ALVPTKLGQEEYEQFLSFNA 81
+ +V +PP GR V A+ S P +
Sbjct: 440 GFVVSAVLCRPPSRQGRGRKTLAPCPVQAFAESLSPPLSLFVSSDLSSPSLLAALEDLCL 499
Query: 82 DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMD 141
DVAV A+ +P +L + G H SLLP++RGAAP++RA+M G+ G+++++
Sbjct: 500 DVAVCAAFASKLPDSLLRLPRYGTVLIHPSLLPQYRGAAPVRRALMNGETRVGVSLLRPS 559
Query: 142 KHLDTGPVAFMRKVPISSNINTAGLQQELSVL--CAHAMVEAMDKLEQNNLPLSPQIENG 199
D G V + +S + + ++++L A + P PQ N
Sbjct: 560 SRFDDGAVLHQSCLDLSGDEHAEEIEEQLFQRGTEALLTASLWAGNRKGGGPGVPQDANK 619
Query: 200 ITYAEKISKGETRVNFCRSAENVHNH--IRALSPFPGAWLEMMIGNKHERIKLLESQLVE 257
T A KI + R++F + ++ S G W E+ I + E+
Sbjct: 620 ATVARKIRPEDRRISFAEMSATKIHNTVRALASHGSGVWTELEICFQSASSWQDEATERP 679
Query: 258 GEGK 261
+ +
Sbjct: 680 RKAE 683
Score = 39.9 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 267 NPNFTIACSQGAVRIMR-LQRAGGRVLDIGDFLLG 300
+ C G+V ++ LQR L +F G
Sbjct: 797 SGALRFVCGDGSVLLVEKLQRESRGPLSGAEFWNG 831
>gi|221507881|gb|EEE33468.1| methionyl-tRNA formyltransferase, putative [Toxoplasma gondii VEG]
Length = 710
Score = 44.5 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 54/244 (22%), Positives = 94/244 (38%), Gaps = 7/244 (2%)
Query: 25 SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP---ALVPTKLGQEEYEQFLSFNA 81
+ +V +PP GR V A+ S P +
Sbjct: 265 GFVVSAVLCRPPSRQGRGRKTLAPCPVQAFAESLSPPLSLFVSSDLSSPSLLAALEDLCL 324
Query: 82 DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMD 141
DVAV A+ +P +L + G H SLLP++RGAAP++RA+M G+ G+++++
Sbjct: 325 DVAVCAAFASKLPDSLLRLPRYGTVLIHPSLLPQYRGAAPVRRALMNGETRVGVSLLRPS 384
Query: 142 KHLDTGPVAFMRKVPISSNINTAGLQQELSVL--CAHAMVEAMDKLEQNNLPLSPQIENG 199
D G V + +S + + ++++L A + P PQ N
Sbjct: 385 SRFDDGAVLHQSCLDLSGDEHAEEIEEQLFQRGTEALLTASLWAGNRKGGGPGVPQDANK 444
Query: 200 ITYAEKISKGETRVNFCRSAENVHNH--IRALSPFPGAWLEMMIGNKHERIKLLESQLVE 257
T A KI + R++F + ++ S G W E+ I + E+
Sbjct: 445 ATVARKIRPEDRRISFAEMSATKIHNTVRALASHGSGVWTELEICFQSASSWQDEATERP 504
Query: 258 GEGK 261
+ +
Sbjct: 505 RKAE 508
Score = 39.9 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 267 NPNFTIACSQGAVRIMR-LQRAGGRVLDIGDFLLG 300
+ C G+V ++ LQR L +F G
Sbjct: 622 SGALRFVCGDGSVLLVEKLQRESRGPLSGAEFWNG 656
>gi|221483400|gb|EEE21719.1| methionyl-tRNA formyltransferase, putative [Toxoplasma gondii GT1]
Length = 710
Score = 44.5 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 54/244 (22%), Positives = 94/244 (38%), Gaps = 7/244 (2%)
Query: 25 SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP---ALVPTKLGQEEYEQFLSFNA 81
+ +V +PP GR V A+ S P +
Sbjct: 265 GFVVSAVLCRPPSRQGRGRKTLAPCPVQAFAESLSPPLSLFVSSDLSSPSLLAALEDLCL 324
Query: 82 DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMD 141
DVAV A+ +P +L + G H SLLP++RGAAP++RA+M G+ G+++++
Sbjct: 325 DVAVCAAFASKLPDSLLRLPRYGTVLIHPSLLPQYRGAAPVRRALMNGETRVGVSLLRPS 384
Query: 142 KHLDTGPVAFMRKVPISSNINTAGLQQELSVL--CAHAMVEAMDKLEQNNLPLSPQIENG 199
D G V + +S + + ++++L A + P PQ N
Sbjct: 385 SRFDDGAVLHQSCLDLSGDEHAEEIEEQLFQRGTEALLTASLWAGNRKGGGPGVPQDANK 444
Query: 200 ITYAEKISKGETRVNFCRSAENVHNH--IRALSPFPGAWLEMMIGNKHERIKLLESQLVE 257
T A KI + R++F + ++ S G W E+ I + E+
Sbjct: 445 ATVARKIRPEDRRISFAEMSATKIHNTVRALASHGSGVWTELEICFQSASSWQDEATERP 504
Query: 258 GEGK 261
+ +
Sbjct: 505 RKAE 508
Score = 39.9 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 267 NPNFTIACSQGAVRIMR-LQRAGGRVLDIGDFLLG 300
+ C G+V ++ LQR L +F G
Sbjct: 622 SGALRFVCGDGSVLLVEKLQRESRGPLSGAEFWNG 656
>gi|217974065|ref|YP_002358816.1| formyltetrahydrofolate deformylase [Shewanella baltica OS223]
gi|217499200|gb|ACK47393.1| formyltetrahydrofolate deformylase [Shewanella baltica OS223]
Length = 291
Score = 44.5 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 64/173 (36%), Gaps = 28/173 (16%)
Query: 2 TLRVVFMGTSEFAVATL-QALVSSSH-----SIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
R+V + T E L L+ + + I +V A+ + A
Sbjct: 95 KKRIVVLVTKE--AHCLGDLLMKAYYGGLSVEIAAVVGNHD-------------ALRELA 139
Query: 56 QEFSLPALVPTKLGQEEYEQFLS-------FNADVAVVVAYGLVIPQRILNATKLGFYNG 108
++F++P + + G + + + + D V+ Y V+ + N
Sbjct: 140 EKFNIPFHLVSHEGLDRIQHEQALLAAVSQYEPDYLVLAKYMRVLTPDFVAQYPNRIINI 199
Query: 109 HASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNI 161
H S LP + GAAP ++A G G ++ LD GP+ +P+ +
Sbjct: 200 HHSFLPAFIGAAPYRQAWERGVKIIGATAHFVNNCLDEGPIIKQDVIPVDHSY 252
>gi|237839323|ref|XP_002368959.1| formyl transferase domain-containing protein [Toxoplasma gondii
ME49]
gi|211966623|gb|EEB01819.1| formyl transferase domain-containing protein [Toxoplasma gondii
ME49]
Length = 710
Score = 44.5 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 54/244 (22%), Positives = 94/244 (38%), Gaps = 7/244 (2%)
Query: 25 SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP---ALVPTKLGQEEYEQFLSFNA 81
+ +V +PP GR V A+ S P +
Sbjct: 265 GFVVSAVLCRPPSRQGRGRKTLAPCPVQAFAESLSPPLSLFVSSDLSSPSLLAALEDLCL 324
Query: 82 DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMD 141
DVAV A+ +P +L + G H SLLP++RGAAP++RA+M G+ G+++++
Sbjct: 325 DVAVCAAFASKLPDSLLRLPRYGTVLIHPSLLPQYRGAAPVRRALMNGETRVGVSLLRPS 384
Query: 142 KHLDTGPVAFMRKVPISSNINTAGLQQELSVL--CAHAMVEAMDKLEQNNLPLSPQIENG 199
D G V + +S + + ++++L A + P PQ N
Sbjct: 385 SRFDDGAVLHQSCLDLSGDEHAEEIEEQLFQRGTEALLTASLWAGNRKGGGPGVPQDANK 444
Query: 200 ITYAEKISKGETRVNFCRSAENVHNH--IRALSPFPGAWLEMMIGNKHERIKLLESQLVE 257
T A KI + R++F + ++ S G W E+ I + E+
Sbjct: 445 ATVARKIRPEDRRISFAEMSATKIHNTVRALASHGSGVWTELEICFQSASSWQDEATERP 504
Query: 258 GEGK 261
+ +
Sbjct: 505 RKAE 508
Score = 39.9 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 267 NPNFTIACSQGAVRIMR-LQRAGGRVLDIGDFLLG 300
+ C G+V ++ LQR L +F G
Sbjct: 622 SGALRFVCGDGSVLLVEKLQRESRGPLSGAEFWNG 656
>gi|152999972|ref|YP_001365653.1| formyltetrahydrofolate deformylase [Shewanella baltica OS185]
gi|160874593|ref|YP_001553909.1| formyltetrahydrofolate deformylase [Shewanella baltica OS195]
gi|151364590|gb|ABS07590.1| formyltetrahydrofolate deformylase [Shewanella baltica OS185]
gi|160860115|gb|ABX48649.1| formyltetrahydrofolate deformylase [Shewanella baltica OS195]
Length = 288
Score = 44.5 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 64/173 (36%), Gaps = 28/173 (16%)
Query: 2 TLRVVFMGTSEFAVATL-QALVSSSH-----SIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
R+V + T E L L+ + + I +V A+ + A
Sbjct: 92 KKRIVVLVTKE--AHCLGDLLMKAYYGGLSVEIAAVVGNHD-------------ALRELA 136
Query: 56 QEFSLPALVPTKLGQEEYEQFLS-------FNADVAVVVAYGLVIPQRILNATKLGFYNG 108
++F++P + + G + + + + D V+ Y V+ + N
Sbjct: 137 EKFNIPFHLVSHEGLDRIQHEQALLAAVSQYEPDYLVLAKYMRVLTPDFVAQYPNRIINI 196
Query: 109 HASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNI 161
H S LP + GAAP ++A G G ++ LD GP+ +P+ +
Sbjct: 197 HHSFLPAFIGAAPYRQAWERGVKIIGATAHFVNNCLDEGPIIKQDVIPVDHSY 249
>gi|126173683|ref|YP_001049832.1| formyltetrahydrofolate deformylase [Shewanella baltica OS155]
gi|125996888|gb|ABN60963.1| formyltetrahydrofolate deformylase [Shewanella baltica OS155]
Length = 288
Score = 44.5 bits (103), Expect = 0.022, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 64/173 (36%), Gaps = 28/173 (16%)
Query: 2 TLRVVFMGTSEFAVATL-QALVSSSH-----SIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
R+V + T E L L+ + + I +V A+ + A
Sbjct: 92 KKRIVVLVTKE--AHCLGDLLMKAYYGGLSVEIAAVVGNHD-------------ALRELA 136
Query: 56 QEFSLPALVPTKLGQEEYEQFLS-------FNADVAVVVAYGLVIPQRILNATKLGFYNG 108
++F++P + + G + + + + D V+ Y V+ + N
Sbjct: 137 EKFNIPFHLVSHEGLDRIQHEQALLAAVSQYEPDYLVLAKYMRVLTPDFVAQYPNRIINI 196
Query: 109 HASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNI 161
H S LP + GAAP ++A G G ++ LD GP+ +P+ +
Sbjct: 197 HHSFLPAFIGAAPYRQAWERGVKIIGATAHFVNNCLDEGPIIKQDVIPVDHSY 249
>gi|330808703|ref|YP_004353165.1| hydrogenase maturation factor [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376811|gb|AEA68161.1| putative hydrogenase maturation factor [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 572
Score = 44.1 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 78/239 (32%), Gaps = 7/239 (2%)
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
P++V Q A + + +P+++ + H ++ RGA+
Sbjct: 31 PSVVLFTDPASVCRQIEESGAHLVICPFLKDRVPEQLWRNPRRPVVIIHPGIVG-DRGAS 89
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
+ AI G+ ++ + +D GPV + + + + L A +
Sbjct: 90 ALDWAITRQPERWGVTALQAVEEMDAGPVWATCEFDLPQGLRKSELYNGPVSDAAIRCIR 149
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ + + P + ++ T+ + S + I+ ++
Sbjct: 150 EVVEKYLDGFIPVPLDYDRHDVVGRLQPNMTQAHRTFSWHDSTGFIKRCIDAADGQPGVL 209
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGGRVLDIGD 296
E+ L ++ G PGE++ + +A ++ I L+R +
Sbjct: 210 ASLAGEQFYLYDAHPDVRHGLPGELLAVRDDAVLVATGDASLWIGALRR---KPQPGEQ 265
>gi|219849132|ref|YP_002463565.1| formyl transferase domain-containing protein [Chloroflexus
aggregans DSM 9485]
gi|219543391|gb|ACL25129.1| formyl transferase domain protein [Chloroflexus aggregans DSM 9485]
Length = 307
Score = 44.1 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 58/296 (19%), Positives = 104/296 (35%), Gaps = 19/296 (6%)
Query: 3 LRVVFMGTS-EFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVL--SAV-------- 51
+R+VF A L IV + P P G L + S +
Sbjct: 1 MRIVFFAIPGPLAWTVWHRLTELPVEIVGLV--HPAPPGMPALTILPPTSPIPRQEIVTP 58
Query: 52 ---HKKAQEFSLPALVPTKLGQEEYEQFLSFNA-DVAVVVAYGLVIPQRILNATKLGFYN 107
+ +A + ++P ++ G L D+A+VV + I +L +LGF N
Sbjct: 59 ITLYSRAAQANVPRFAVSRDGMTALAAQLEQQRVDLAIVVCWPWRIRPPLLTIPRLGFLN 118
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQ 167
H S LP RG P+ A+ G T I MD+ D GP+ + + ++
Sbjct: 119 MHPSPLPELRGPEPLFCALRLGWQRTAITWHLMDEAFDHGPIVLQAWFDLPFGERLSVIE 178
Query: 168 QELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR 227
A + EA++ L + PQ +G TY S S + +R
Sbjct: 179 TVAGQQAARLLPEALNDLVTSTWQPQPQATDGSTYPAPRSSDLHFTA-AWSVVQAYAFVR 237
Query: 228 ALSPFPGAWLEMMIGNKH-ERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIM 282
A++ + + + + ++ ++ E V + + G + +
Sbjct: 238 AIAEWGQPFTYVAADGQTATIGDAIDYRVGEQLAVSVIVHSNRIMLQLRDGILVCL 293
>gi|300726054|ref|ZP_07059512.1| NADP oxidoreductase coenzyme f420-dependent superfamily
[Prevotella bryantii B14]
gi|299776661|gb|EFI73213.1| NADP oxidoreductase coenzyme f420-dependent superfamily
[Prevotella bryantii B14]
Length = 261
Score = 44.1 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQ 34
++V+F+G A +AL+ S H I+ VY++
Sbjct: 1 MKVIFIGAGNLATNLAKALLQSGHDIIQVYSR 32
>gi|261329626|emb|CBH12608.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 502
Score = 44.1 bits (102), Expect = 0.026, Method: Composition-based stats.
Identities = 11/180 (6%), Positives = 31/180 (17%), Gaps = 5/180 (2%)
Query: 34 QPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVI 93
QPP A + H+ + + + +++Q + +
Sbjct: 91 QPPMAAQFHNHQWQQFHNHQWQRFHN---HQWQQFHNLQWQQSHNHQWQQFHNHQWQRFH 147
Query: 94 PQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMR 153
+ + H L R + + + H
Sbjct: 148 NHQWQRFHNHQWQQFH--NLQWQRSHNHQWQRFHNHQWQQFHNLQWQQFHNHQWQRFHNH 205
Query: 154 KVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRV 213
+ N + + + +
Sbjct: 206 QWQRFHNHQWQQFHNLQWQRSHNHQWRRELFRQHLPCFIRAYHPKVCLLPSQYLPSGFHP 265
>gi|15606408|ref|NP_213788.1| hydrogenase regulation HoxX [Aquifex aeolicus VF5]
gi|2983617|gb|AAC07186.1| hydrogenase regulation HoxX [Aquifex aeolicus VF5]
Length = 562
Score = 44.1 bits (102), Expect = 0.027, Method: Composition-based stats.
Identities = 45/213 (21%), Positives = 78/213 (36%), Gaps = 16/213 (7%)
Query: 100 ATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISS 159
K H P RG + AIM G+ G+ +++ + D G V R P+
Sbjct: 65 WKKYKTLIIHPGP-PGDRGPNALDWAIMKGERIWGVTLLEASEEYDAGDVWAYRTFPMRF 123
Query: 160 NINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSA 219
+ + E++ ++EA++ E+ + +PQ E+ + +
Sbjct: 124 ARKASIYRNEVTEGVVECVLEALENFERGDFKPTPQKEHWWNPKMEQELRRVDWEQDDTK 183
Query: 220 ENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQ 276
V + A PGA +++ E +L +GKPGEV+ + I
Sbjct: 184 -TVLRKVYASDSQPGASSKVLGKEVLLFNAYPEEEL---KGKPGEVLALRDEAVCIGTRD 239
Query: 277 GAVRIMRLQRAGGR---VLDIG----DFLLGCP 302
GAV I + R + L +FL G
Sbjct: 240 GAVWITHM-RERKKESIKLPSARVLGEFLKGVK 271
>gi|23009279|ref|ZP_00050387.1| COG0223: Methionyl-tRNA formyltransferase [Magnetospirillum
magnetotacticum MS-1]
Length = 288
Score = 44.1 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 50/286 (17%), Positives = 99/286 (34%), Gaps = 17/286 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ F G +F LV + + V ++T+P G+ V +A+ +P
Sbjct: 1 MKFAFAG-IDFLGGVFDGLVEAGWTPVQLFTRP-----CDGIYDFNEVVVAQARRHRIPI 54
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ L + D+A+VVA + + + N H S LP RG P+
Sbjct: 55 QLSRLLPGDIERLAKEHGRDIALVVAGYPWLVKG-WHGRVRYALNFHPSPLPTGRGPYPL 113
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
+AI+ G+ + + + + S+ T + A +
Sbjct: 114 FKAILDRYESWGVTAHVLAEQGFDTGDILAQDIFALSDAETHETLLAKCQMAARRLALGP 173
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
P+ + +Y +++ + ++F + V +RA +E +
Sbjct: 174 IGTGLAERWRRPEPQGDGSYWPRVTDADRTLDFRQDVAEVLCRVRAF-----GSIETIAR 228
Query: 243 NKHERIKLLESQ--LVEGEGKPGEVI---NPNFTIACSQGAVRIMR 283
RI + ++ PG V+ + IA G V+I R
Sbjct: 229 PGEGRIFVAAAEGWREAHRHAPGAVVHRHRRHLVIAARDGYVQITR 274
>gi|125381147|gb|ABN41490.1| putative glycosyltransferase [Campylobacter jejuni]
Length = 274
Score = 44.1 bits (102), Expect = 0.029, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 88/252 (34%), Gaps = 13/252 (5%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
M + ++ G + AV +LQ ++ + + P + +G+ S ++ K A + +
Sbjct: 1 MIMIKICIAGKNNIAVNSLQFILKNYFEADQIVVIPNK--NDKGIDSWQKSLLKFALDSN 58
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+ + ++ E F S D + + +N H S LP+++G
Sbjct: 59 IKIVTLDEIYNIEQIIFFSLEFDQIIKIEN----------FKSDRLFNIHFSALPKYKGV 108
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
I+ + E+G+ + ++D +DTG + PI N L
Sbjct: 109 FTSITPILNNELESGVTLHRIDNGIDTGNIIDQHCFPIDINDTARDLYFNYLKYGESIFK 168
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + + N+ Q +Y + + ++ F L +
Sbjct: 169 KNIQTIINNSYKDLKQTNINSSYFSRKDINLVHKINFKKTSFEIHNQIRAFIFQEYQLPI 228
Query: 240 MIGNKHERIKLL 251
+ +K + L+
Sbjct: 229 INNSKIIKSILI 240
>gi|229524802|ref|ZP_04414207.1| methionyl-tRNA formyltransferase [Vibrio cholerae bv. albensis
VL426]
gi|229338383|gb|EEO03400.1| methionyl-tRNA formyltransferase [Vibrio cholerae bv. albensis
VL426]
gi|295148998|gb|ADF80996.1| formyl transferase [Vibrio cholerae]
Length = 318
Score = 43.7 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 51/304 (16%), Positives = 109/304 (35%), Gaps = 29/304 (9%)
Query: 3 LRVVFM--GTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSV------------- 47
+R++ + G + L S H I+ + PR + K
Sbjct: 1 MRILIITSGLTRIVSPVL----DSGHEILGIVESMPRGWSEKQEKPFLFQFAQKIHRIFL 56
Query: 48 --LSAVHKKAQEFSLPA-LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLG 104
+ + + ++ + E N D+ VV + ++ + +++ K G
Sbjct: 57 GRKKTLKQFCEIRNIRYNYISKGRDAEVTNWVKELNPDLIVVFSMSQLLKKDLIDIPKYG 116
Query: 105 FYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPIS-SNINT 163
N H S+LP +RG P + G+ + +D+ DTG + F +V I +
Sbjct: 117 VINLHPSMLPEYRGPNPDFWQYYNMEMNPGVTVHYIDEGEDTGDIIFQERVHIPLGIKSP 176
Query: 164 AGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAEN-- 221
L + + + + +V+A+ ++ + P PQ + T + K E
Sbjct: 177 ERLDKLIGGVGSSLLVKAIQAIKSGSAPRIPQPSHSSTLRARNLKSEEHKEIIDWQNWPI 236
Query: 222 --VHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI--NPNFTIACSQG 277
+ + +R + A+ + K +R + E + + PG ++ +A G
Sbjct: 237 ERIWHVLRGTELWLNAYDQPKGIFKGQRWVVGEYERKDNIDLPGAIVRYKGRKALATPDG 296
Query: 278 AVRI 281
+ I
Sbjct: 297 YIFI 300
>gi|300694227|ref|YP_003750200.1| NADH-dependent nitrite reductase, rubredoxin--nad(+) reductase
[Ralstonia solanacearum PSI07]
gi|299076264|emb|CBJ35578.1| NADH-dependent nitrite reductase, Rubredoxin--NAD(+) reductase
[Ralstonia solanacearum PSI07]
Length = 851
Score = 43.7 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSI-VSVYTQPPRPAGRR 42
MT+++V +G L++L+ + H + V+V + PRPA R
Sbjct: 1 MTMKIVVIGHGMVGHKFLESLLHAPGHDLHVTVLCEEPRPAYDR 44
>gi|300697857|ref|YP_003748518.1| NADH-dependent nitrite reductase, Rubredoxin--NAD(+) reductase
[Ralstonia solanacearum CFBP2957]
gi|299074581|emb|CBJ54132.1| NADH-dependent nitrite reductase, Rubredoxin--NAD(+) reductase
[Ralstonia solanacearum CFBP2957]
Length = 856
Score = 43.7 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSI-VSVYTQPPRPAGRR 42
MT+++V +G L++L+ + H + V+V + PRPA R
Sbjct: 1 MTMKIVVIGHGMVGHKFLESLLHAPGHDLHVTVLCEEPRPAYDR 44
>gi|299069626|emb|CBJ40898.1| NADH-dependent nitrite reductase, Rubredoxin--NAD(+) reductase
[Ralstonia solanacearum CMR15]
Length = 852
Score = 43.7 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSI-VSVYTQPPRPAGRR 42
MT+++V +G L++L+ + H + V+V + PRPA R
Sbjct: 1 MTMKIVVIGHGMVGHKFLESLLHAPGHDLHVTVLCEEPRPAYDR 44
>gi|207739556|ref|YP_002257949.1| nitrite reductase nadph (large subunit) protein [Ralstonia
solanacearum IPO1609]
gi|206592936|emb|CAQ59842.1| nitrite reductase nadph (large subunit) protein [Ralstonia
solanacearum IPO1609]
Length = 852
Score = 43.7 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSI-VSVYTQPPRPAGRR 42
MT+++V +G L++L+ + H + V+V + PRPA R
Sbjct: 1 MTMKIVVIGHGMVGHKFLESLLHAPGHDLHVTVLCEEPRPAYDR 44
>gi|207724888|ref|YP_002255285.1| nitrite reductase nadph (large subunit) protein [Ralstonia
solanacearum MolK2]
gi|206590114|emb|CAQ37075.1| nitrite reductase nadph (large subunit) protein [Ralstonia
solanacearum MolK2]
Length = 852
Score = 43.7 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSI-VSVYTQPPRPAGRR 42
MT+++V +G L++L+ + H + V+V + PRPA R
Sbjct: 1 MTMKIVVIGHGMVGHKFLESLLHAPGHDLHVTVLCEEPRPAYDR 44
>gi|17549443|ref|NP_522783.1| nitrite reductase NADPH large subunit [Ralstonia solanacearum
GMI1000]
gi|17431696|emb|CAD18373.1| probable nitrite reductase nadph (large subunit) oxidoreductase
protein [Ralstonia solanacearum GMI1000]
Length = 852
Score = 43.7 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSI-VSVYTQPPRPAGRR 42
MT+++V +G L++L+ + H + V+V + PRPA R
Sbjct: 1 MTMKIVVIGHGMVGHKFLESLLHAPGHDLHVTVLCEEPRPAYDR 44
>gi|83748780|ref|ZP_00945794.1| Nitrite reductase [NAD(P)H] large subunit [Ralstonia solanacearum
UW551]
gi|83724533|gb|EAP71697.1| Nitrite reductase [NAD(P)H] large subunit [Ralstonia solanacearum
UW551]
Length = 852
Score = 43.7 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSI-VSVYTQPPRPAGRR 42
MT+++V +G L++L+ + H + V+V + PRPA R
Sbjct: 1 MTMKIVVIGHGMVGHKFLESLLHAPGHDLPVTVLCEEPRPAYDR 44
>gi|94986563|ref|YP_594496.1| phosphoribosylglycinamide formyltransferase [Lawsonia
intracellularis PHE/MN1-00]
gi|94730812|emb|CAJ54174.1| phosphoribosylglycinamide formyltransferase [Lawsonia
intracellularis PHE/MN1-00]
Length = 227
Score = 43.7 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 36/208 (17%), Positives = 75/208 (36%), Gaps = 27/208 (12%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS------SHSIVSVYTQPPRPAGRRGLKSVLSAVHKK 54
M+L++ G+ QA+ + I + + + + ++
Sbjct: 1 MSLKIAVFGSGNGG--NFQAIQDHITKGTLNAEIKLLVC--DK---------SDAYIIER 47
Query: 55 AQEFSLPALVPTKLGQEEYEQFLSF--------NADVAVVVAYGLVIPQRILNATKLGFY 106
A++ ++P + + + E+ + DV V+ Y ++ ++
Sbjct: 48 AKKENIPYFIVSYTKDKSREEIDKTILDAVQEADVDVLVLAGYMRLLSSVVIKVFHNRIL 107
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H SLLP + G I A G TG + +D+ +D G + +P+ + L
Sbjct: 108 NIHPSLLPAFPGVHGIHDAQTWGVKFTGCTVHFVDEMMDNGSIIIQACIPVVDGESLETL 167
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSP 194
QQ + +A+ + N L L
Sbjct: 168 QQRIHEQEHRIYPQALQWMADNRLELCE 195
>gi|319425748|gb|ADV53822.1| formyltetrahydrofolate deformylase [Shewanella putrefaciens 200]
Length = 316
Score = 43.7 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 65/173 (37%), Gaps = 28/173 (16%)
Query: 2 TLRVVFMGTSEFAVATL-QALVSSSH-----SIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
R+V + T E L L+ + + I +V A+ + A
Sbjct: 120 KKRIVVLVTKE--AHCLGDLLMKAYYGGLSVDIAAVVGNHD-------------ALRELA 164
Query: 56 QEFSLPALVPTKLGQEEYEQFLS-------FNADVAVVVAYGLVIPQRILNATKLGFYNG 108
++F++P + + +G + + + + D V+ Y V+ + N
Sbjct: 165 EKFNIPFHLVSHVGLDRTQHEQALLGAVAQYEPDYLVLAKYMRVLTPDFVAQYPNRIINI 224
Query: 109 HASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNI 161
H S LP + GAAP ++A G G ++ LD GP+ +P+ +
Sbjct: 225 HHSFLPAFIGAAPYRQAWERGVKIIGATAHFVNNCLDEGPIIKQDVIPVDHSY 277
>gi|120599557|ref|YP_964131.1| formyltetrahydrofolate deformylase [Shewanella sp. W3-18-1]
gi|120559650|gb|ABM25577.1| formyltetrahydrofolate deformylase [Shewanella sp. W3-18-1]
Length = 316
Score = 43.7 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 65/173 (37%), Gaps = 28/173 (16%)
Query: 2 TLRVVFMGTSEFAVATL-QALVSSSH-----SIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
R+V + T E L L+ + + I +V A+ + A
Sbjct: 120 KKRIVVLVTKE--AHCLGDLLMKAYYGGLSVDIAAVVGNHD-------------ALRELA 164
Query: 56 QEFSLPALVPTKLGQEEYEQFLS-------FNADVAVVVAYGLVIPQRILNATKLGFYNG 108
++F++P + + +G + + + + D V+ Y V+ + N
Sbjct: 165 EKFNIPFHLVSHVGLDRTQHEQALLGAVAQYEPDYLVLAKYMRVLTPDFVAQYPNRIINI 224
Query: 109 HASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNI 161
H S LP + GAAP ++A G G ++ LD GP+ +P+ +
Sbjct: 225 HHSFLPAFIGAAPYRQAWERGVKIIGATAHFVNNCLDEGPIIKQDVIPVDHSY 277
>gi|146292446|ref|YP_001182870.1| formyltetrahydrofolate deformylase [Shewanella putrefaciens CN-32]
gi|145564136|gb|ABP75071.1| formyltetrahydrofolate deformylase [Shewanella putrefaciens CN-32]
Length = 316
Score = 43.7 bits (101), Expect = 0.035, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 65/173 (37%), Gaps = 28/173 (16%)
Query: 2 TLRVVFMGTSEFAVATL-QALVSSSH-----SIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
R+V + T E L L+ + + I +V A+ + A
Sbjct: 120 KKRIVVLVTKE--AHCLGDLLMKAYYGGLSVDIAAVVGNHD-------------ALRELA 164
Query: 56 QEFSLPALVPTKLGQEEYEQFLS-------FNADVAVVVAYGLVIPQRILNATKLGFYNG 108
++F++P + + +G + + + + D V+ Y V+ + N
Sbjct: 165 EKFNIPFHLVSHVGLDRTQHEQALLGAVAQYEPDYLVLAKYMRVLTPDFVAQYPNRIINI 224
Query: 109 HASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNI 161
H S LP + GAAP ++A G G ++ LD GP+ +P+ +
Sbjct: 225 HHSFLPAFIGAAPYRQAWERGVKIIGATAHFVNNCLDEGPIIKQDVIPVDHSY 277
>gi|329120154|ref|ZP_08248824.1| methionyl-tRNA formyltransferase [Neisseria bacilliformis ATCC
BAA-1200]
gi|327463685|gb|EGF10003.1| methionyl-tRNA formyltransferase [Neisseria bacilliformis ATCC
BAA-1200]
Length = 194
Score = 43.7 bits (101), Expect = 0.036, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 70/194 (36%), Gaps = 21/194 (10%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ +G A LQ + H + +VY P A R + + A +P
Sbjct: 1 MRITIIGQKWLAAELLQQCLRDGHQVTAVY--APNSADR---------LFQAAAAHGVP- 48
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ DV + + IP+ + + + G H SLLPR RG +
Sbjct: 49 -------AQTALPAALPECDVILAAHAHVFIPKSLRDQARYGAVGYHPSLLPRHRGRDAV 101
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
+ A+ + TG + +MD DTG + I + L Q L +
Sbjct: 102 RWAVHMREPVTGGTLYRMDDGADTGGILLQDWCHIRATDTAQSLWQRE--LAPMGLRLFG 159
Query: 183 DKLEQNNLPLSPQI 196
L + ++P PQ
Sbjct: 160 QYLTRPDIPAVPQD 173
>gi|195996569|ref|XP_002108153.1| hypothetical protein TRIADDRAFT_52335 [Trichoplax adhaerens]
gi|190588929|gb|EDV28951.1| hypothetical protein TRIADDRAFT_52335 [Trichoplax adhaerens]
Length = 213
Score = 43.7 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 46/206 (22%), Positives = 75/206 (36%), Gaps = 16/206 (7%)
Query: 100 ATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISS 159
G N H SLLPRWRGA+PIQ A++ GDN TG+ I + + I
Sbjct: 1 MYCRGAINVHPSLLPRWRGASPIQFALLHGDNVTGVTIADVLPD-------KYDRGRILM 53
Query: 160 NINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSA 219
+ L+ L + H + ++ Q + I ++E +K R
Sbjct: 54 QESLKLLRALLDLANLHRKAQKQNERNVTYASKINQNMDWINWSEHSNKFI-----NRMW 108
Query: 220 ENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTIACS 275
+ + + G ++++ E + S + K G V I C
Sbjct: 109 RALGYQKGLKTTWRGTVVKLIDFCYLENYEANLSDINHTNMKHGFVKYDEDLNAIIIKCK 168
Query: 276 QGAVRIMRLQRAGGRVLDIGDFLLGC 301
G V ++Q A +V+ DF
Sbjct: 169 DGLVAFRKVQFACRKVITALDFYNAY 194
>gi|34499597|ref|NP_903812.1| hoxX-like protein [Chromobacterium violaceum ATCC 12472]
gi|34105448|gb|AAQ61803.1| hoxX-like protein [Chromobacterium violaceum ATCC 12472]
Length = 565
Score = 43.3 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 29/207 (14%), Positives = 67/207 (32%), Gaps = 4/207 (1%)
Query: 84 AVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKH 143
+ +P + + H ++ RGA+ + AIM G+ G+ ++ +
Sbjct: 54 VICPFLKDRVPAELWRDSPFPVVIIHPGIVG-DRGASALDWAIMKGEKRWGVTALQAVEE 112
Query: 144 LDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYA 203
+D GPV R+ + I + L A + + +
Sbjct: 113 MDAGPVWSSREFELPRGIRKSELYNGPVSDAAMYCIRDVVEKFAGGYQPQAVDYADPQVG 172
Query: 204 EKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPG 263
++ + + I+ ++ R + ++ L G+PG
Sbjct: 173 GRLQPNMKQADRAFDWRAPAAEIKRRIDAADGQPGVLADLAGGRYYVYDAHLDHRSGEPG 232
Query: 264 EVI---NPNFTIACSQGAVRIMRLQRA 287
++ + +AC ++ I L+R
Sbjct: 233 RILAVHDDAALVACGDASLWIGSLRRQ 259
>gi|224096970|ref|XP_002188729.1| PREDICTED: phosphoribosylglycinamide formyltransferase,
phosphoribosylglycinamide synthetase,
phosphoribosylaminoimidazole synthetase [Taeniopygia
guttata]
Length = 1003
Score = 43.3 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 31/171 (18%)
Query: 2 TLRVVFM--GTSEFAVATLQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSAVHK 53
++V + GT L+AL++S+ IV V + P G R
Sbjct: 803 KMKVAVLISGTGT----NLEALINSTKKDTSYAQIVLVISNKPGVEGLRK---------- 848
Query: 54 KAQEFSLPALVPTKLGQEEYEQFL--------SFNADVAVVVAYGLVIPQRILNATKLGF 105
A+ +P V +F F+ ++ + + ++ + +
Sbjct: 849 -AERAGIPTRVVEHTRYPSRTEFDSAVDKVLEEFSVELICLAGFMRILSAPFVKKWEGKI 907
Query: 106 YNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
N H SLLP ++GA + + AG TG + + + +D G + F VP
Sbjct: 908 LNIHPSLLPSFKGAHAHRLVLQAGVRVTGCTVHFVAEEVDAGAIIFQEAVP 958
>gi|293396355|ref|ZP_06640633.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase [Serratia
odorifera DSM 4582]
gi|291421144|gb|EFE94395.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase [Serratia
odorifera DSM 4582]
Length = 440
Score = 43.3 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 225 HIRALSPFPGAWLEMMIGNKHERIKLLESQLVE--GEGKPGEVINPN-FTIACSQGAVRI 281
P+PGA+ + ++ + S++++ + +PG V++ +AC GA+ I
Sbjct: 1 MRAVTEPYPGAFSYLG----QRKMTVWRSRVLDIQHDKQPGTVLSNAPLVVACGDGALEI 56
Query: 282 MRLQ 285
+ Q
Sbjct: 57 IAGQ 60
>gi|312891053|ref|ZP_07750577.1| formyl transferase domain protein [Mucilaginibacter paludis DSM
18603]
gi|311296520|gb|EFQ73665.1| formyl transferase domain protein [Mucilaginibacter paludis DSM
18603]
Length = 314
Score = 43.3 bits (100), Expect = 0.044, Method: Composition-based stats.
Identities = 42/235 (17%), Positives = 83/235 (35%), Gaps = 6/235 (2%)
Query: 51 VHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
V Q+ LP ++ Y N D+ ++ Y +I L +N H
Sbjct: 42 VKAFVQQTKLPFTEERNADKDLYTWLQKGNYDIGFILVYPHLIRLERLKNHPARLFNIHF 101
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL 170
+LP ++G P+ + G ++ G+ I + +D GP+A+ + + N Q L
Sbjct: 102 GVLPGFKGPVPVFWQLKKGLDKIGLTIHHLSSKIDDGPMAWTKTTDNLPHYNYQLANQVL 161
Query: 171 SVLCAHAMVE--AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRA 228
S LC +V + + + + SA + N +RA
Sbjct: 162 SQLCIEGVVFVLHLFINKLPIPEIPTNPNDTAYQKRPQLNNVLINRQTMSAIEICNLVRA 221
Query: 229 LSPFPGAWLEMMIGNKHERIK--LLESQLVEGEGKPGEVINPN--FTIACSQGAV 279
+P+ L + + + ++ + + +IN + I C G +
Sbjct: 222 CNPWNKGALTWFQQQEVKLMDAQVISAIDSADNLQADTIINDDQSLHILCKDGKL 276
>gi|148671669|gb|EDL03616.1| mCG116973 [Mus musculus]
Length = 250
Score = 43.3 bits (100), Expect = 0.045, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 15/209 (7%)
Query: 106 YNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMD-KHLDTGPVAFMRKVPISSNINTA 164
N H S LPRW G+API ++ D TG+ IM++ K D GP+ +P+ +
Sbjct: 2 LNVHPSCLPRWHGSAPIIHKVLHKDTVTGVTIMQIRLKRFDIGPILQQETIPVPPKSTSK 61
Query: 165 GLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHN 224
L+ LS L A+ ++ + KL ++ PQ G+T A K+S G V +
Sbjct: 62 ELEAVLSKLGANMLISVLKKLSESLNNGRPQATKGVTNATKVSAGTICVKWEEQTSEQVL 121
Query: 225 HIRA--------LSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPN----FTI 272
+ + ++++ + L + +L P V+ +
Sbjct: 122 RLHLAIGDIVPLRMLWMENTIKLLDLIEVNNSILADPKLTGQTVTPRSVVYHRPSQMLLV 181
Query: 273 ACSQGAVRIMRLQRAGGRVLDIGDFLLGC 301
C G + + L + L DF G
Sbjct: 182 HCKDGWIGVQSLML--KKTLTATDFYNGY 208
>gi|319408626|emb|CBI82281.1| phosphoribosylglycinamide formyltransferase [Bartonella
schoenbuchensis R1]
Length = 205
Score = 42.9 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 39/214 (18%), Positives = 77/214 (35%), Gaps = 27/214 (12%)
Query: 1 MTLRVVFM----GTSEFAVATLQALVSSSH--SIVSVYTQPPRPAGRRGLKSVLSAVHKK 54
M +V+ G++ ++A +A +++ I++V P AG +K
Sbjct: 1 MKKKVIIFISGNGSNMVSLA--KASKQANYPAEIIAVICDKPHAAGI-----------EK 47
Query: 55 AQEFSLPALVPTKLGQEEYEQFLS--------FNADVAVVVAYGLVIPQRILNATKLGFY 106
A+ LP + + E + D+ + Y +I + +
Sbjct: 48 ARANGLPTHIVDRKNYSTKEAHEESILTILAQYQPDIICLAGYMRLISPHFIKPYEGRIL 107
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H SLLP ++G +R + AG TG + + + +D G + VP+ N L
Sbjct: 108 NIHPSLLPSFKGLNTHERVLQAGVKITGCTVHLVTEAMDEGRILAQAAVPVCPNDTPEML 167
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGI 200
Q + + +A+ + + N
Sbjct: 168 AQRVLQVEHKLYPQALKEFIKGNDNDKIIDYQQQ 201
>gi|218781377|ref|YP_002432695.1| formyl transferase domain protein [Desulfatibacillum alkenivorans
AK-01]
gi|218762761|gb|ACL05227.1| formyl transferase domain protein [Desulfatibacillum alkenivorans
AK-01]
Length = 228
Score = 42.9 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 72/202 (35%), Gaps = 14/202 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
L + G F A L+ L + IV V + P G R + AV + LP
Sbjct: 2 LNIFIAGQKYFGQAVLKELAAMEGIKIVGV-SAP--CCGDRQDRLCREAVKR-----GLP 53
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ L + L D+ + I + TKLG H SLLP RG
Sbjct: 54 VIPAGSLNASTLPEGL----DLIISAHCHDFISPATIQKTKLGAIGYHPSLLPLHRGRDA 109
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFM-RKVPISSNINTAGLQQELSVLCAHAMVE 180
+ AI G+ TG + ++ +D GP+A + +++L +
Sbjct: 110 VYWAIRMGNPVTGGTVYWLNNKVDGGPIAAQGYVFIRPGDSPFDLWRRDLMPMGIMLFRR 169
Query: 181 AMDKLEQNNLPLSPQIENGITY 202
+ L + PQ E T+
Sbjct: 170 VILDLLDGLIVAVPQDEKLATW 191
>gi|209886265|ref|YP_002290122.1| putative formyl transferase [Oligotropha carboxidovorans OM5]
gi|209874461|gb|ACI94257.1| putative formyl transferase [Oligotropha carboxidovorans OM5]
Length = 205
Score = 42.9 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVY 32
MTLRV G+ F V TL+ L++ I V
Sbjct: 4 MTLRVTLAGSRHFGVKTLEMLLTHGVEIAGVV 35
>gi|309778854|ref|ZP_07673625.1| nitrite reductase [NAD(P)H], large subunit [Ralstonia sp.
5_7_47FAA]
gi|308922378|gb|EFP68004.1| nitrite reductase [NAD(P)H], large subunit [Ralstonia sp.
5_7_47FAA]
Length = 851
Score = 42.9 bits (99), Expect = 0.059, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSI-VSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
MT+++V +G L++L+ + H + V+V + PRPA R + K A+E
Sbjct: 1 MTMKIVVIGHGMVGHKFLESLLHAPGHHLQVTVLCEEPRPAYDR-VHLSEFFTGKTAEEL 59
Query: 59 SL 60
SL
Sbjct: 60 SL 61
>gi|187926345|ref|YP_001892690.1| nitrite reductase (NAD(P)H), large subunit [Ralstonia pickettii
12J]
gi|241665832|ref|YP_002984191.1| nitrite reductase (NAD(P)H), large subunit [Ralstonia pickettii
12D]
gi|187728099|gb|ACD29263.1| nitrite reductase (NAD(P)H), large subunit [Ralstonia pickettii
12J]
gi|240867859|gb|ACS65519.1| nitrite reductase (NAD(P)H), large subunit [Ralstonia pickettii
12D]
Length = 851
Score = 42.9 bits (99), Expect = 0.059, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS-SHSI-VSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
MT+++V +G L++L+ + H + V+V + PRPA R + K A+E
Sbjct: 1 MTMKIVVIGHGMVGHKFLESLLHAPGHHLQVTVLCEEPRPAYDR-VHLSEFFTGKTAEEL 59
Query: 59 SL 60
SL
Sbjct: 60 SL 61
>gi|289671630|ref|ZP_06492520.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. syringae
FF5]
Length = 276
Score = 42.9 bits (99), Expect = 0.062, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 4/67 (5%)
Query: 247 RIKLLESQLVEGEG--KPGEVINPN-FTIACSQGAVRIMRLQR-AGGRVLDIGDFLLGCP 302
++ + + + PG VI+ IAC G++ I QR G L
Sbjct: 2 KLIVWAASVDTSSNGEAPGTVISHEPLRIACGDGSLVITAGQRGDNGLYLSGAQLAREFG 61
Query: 303 VIIGCIV 309
++ G +
Sbjct: 62 LVAGSQL 68
>gi|221060915|ref|XP_002262027.1| methionyl-tRNA formyltransferase [Plasmodium knowlesi strain H]
gi|193811177|emb|CAQ41905.1| methionyl-tRNA formyltransferase, putative [Plasmodium knowlesi
strain H]
Length = 669
Score = 42.9 bits (99), Expect = 0.063, Method: Composition-based stats.
Identities = 45/193 (23%), Positives = 84/193 (43%), Gaps = 8/193 (4%)
Query: 2 TLRVVFMGTSEFAVATLQ--ALVSS--SHSIVS--VYTQPPRPAGRRGLKSVLSAVHKKA 55
+R++F+G +EF++ + L+ + IV V T+ PR G R LK S + ++A
Sbjct: 258 KIRILFIGGNEFSLLCFKVIRLIIKYVRNDIVLDHVITKSPRKKG-RHLKLKKSHIEEEA 316
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ + K+ + Y D+ + ++G + Y H SLLP
Sbjct: 317 EKEKIKIFYYDKIRNDTYMLKNE-TFDLCISASFGEIFNASFFKNIASNVYTLHPSLLPL 375
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+RGA+PIQR+++ ++ G +I + +D GPV N + L L +
Sbjct: 376 YRGASPIQRSLLNNESLFGYSIFLTNLRIDAGPVLIRSPHTFGDAFNFNDIITILFTLGS 435
Query: 176 HAMVEAMDKLEQN 188
++ + L
Sbjct: 436 LHLMRHIFFLANY 448
Score = 37.9 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 20/200 (10%), Positives = 46/200 (23%), Gaps = 35/200 (17%)
Query: 132 ETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLP 191
I + + + + N Q L + L
Sbjct: 464 PNPSTISTHNNNKHLKIRHLLYDEENITPHNVKKKQFMLHTDIGQDKMNYAWLRNYLMLS 523
Query: 192 LSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLL 251
+ + + + P L ++ +K +
Sbjct: 524 STHNNNTYAPKIKSEERYVCFFCSTALHIHNKVRGFINWPKVECTLYLVHKGG---LKAM 580
Query: 252 ESQLVEGEGKPGEVINPN-------------------------------FTIACSQGAV- 279
E +L++ + G+ I+ I C ++
Sbjct: 581 EVKLIKTSQESGDHISHQHLHQFKHLDALQSHKCFDGIPRKLAIFNRGAINILCKDNSLL 640
Query: 280 RIMRLQRAGGRVLDIGDFLL 299
+I +LQR +++D F
Sbjct: 641 KIYKLQRKNKKIMDASSFFN 660
>gi|15864563|emb|CAC79542.1| fmt putative protein [Brassica napus]
Length = 194
Score = 42.9 bits (99), Expect = 0.067, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNK--------- 244
PQ ++ T A KI+ E ++F + A +HN +RA + +PG ++++ +
Sbjct: 83 PQDDSKATLAPKIAPDEAWLSFDQEAFILHNKVRAFAGWPGTRAKVLVLDDKSGQQNELE 142
Query: 245 --HERIKLLES-QLVEGEGKPGEVINPNFTIACSQG-AVRIMRLQRAGGRVL 292
++ +S +++ GE + +C G A+ ++ +Q G + +
Sbjct: 143 LKIITTRICQSTEVLNGEQDYVTFKKGSLVFSCGGGTALEVLEVQLPGKKAI 194
>gi|118586692|ref|ZP_01544130.1| NADH dehydrogenase [Oenococcus oeni ATCC BAA-1163]
gi|118432877|gb|EAV39605.1| NADH dehydrogenase [Oenococcus oeni ATCC BAA-1163]
Length = 212
Score = 42.6 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 1 MTLRVVFMGTSEF-AVATLQALVSSSHSIVSV 31
M +++V G S F L+ LV H I+SV
Sbjct: 1 MKMKIVVFGGSGFIGQKLLEILVKRGHDIISV 32
>gi|220921753|ref|YP_002497054.1| formyl transferase domain-containing protein [Methylobacterium
nodulans ORS 2060]
gi|219946359|gb|ACL56751.1| formyl transferase domain protein [Methylobacterium nodulans ORS
2060]
Length = 288
Score = 42.6 bits (98), Expect = 0.073, Method: Composition-based stats.
Identities = 46/286 (16%), Positives = 96/286 (33%), Gaps = 17/286 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ F G +F +AL + + ++T+P G+ V +A+ +P
Sbjct: 1 MKFAFAG-IDFLGGVFEALTGAGWQPIKLFTRP-----CDGIYDFNDVVVAQARRHRVPM 54
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ + D A+VVA + + N H S LP RG P+
Sbjct: 55 QLSRLRASDIDALTAEHGRDWALVVAGYPWLVTGWPGRVRY-ALNFHPSPLPDGRGPYPL 113
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
+AI+ G+ + + ++V S + T + A +
Sbjct: 114 FKAILDAYETWGVTAHVLAEEGFDTGDILAQEVFPLSPLETHETLLARCQMAAMRLAAGP 173
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
E + + + Y +++ + ++F + V +RA +E +
Sbjct: 174 IARELPARWRAAEPQGDGAYWPRVTDADRTLDFRQPVAAVLRKVRAF-----GAIETVAR 228
Query: 243 NKHERIKLLESQ--LVEGEGKPGEVI---NPNFTIACSQGAVRIMR 283
R+ + + PG ++ + +A G V+I R
Sbjct: 229 LNDTRVFVASADGWTEPHRHAPGTIVHRHRRHVLVAARDGYVQITR 274
>gi|167522248|ref|XP_001745462.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776420|gb|EDQ90040.1| predicted protein [Monosiga brevicollis MX1]
Length = 938
Score = 42.6 bits (98), Expect = 0.074, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 64/175 (36%), Gaps = 31/175 (17%)
Query: 1 MTLRVVFM--GTSEFAVATLQALVSS------SHSIVSVYTQPPRPAGRRGLKSVLSAVH 52
M RV + GT LQAL+ + I V + P G +GL
Sbjct: 736 MRKRVAVLISGTGT----NLQALIDASSNEDFPAEIALVISNKP---GVKGL-------- 780
Query: 53 KKAQEFSLP--------ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLG 104
++A +P Q + + D+ + + ++ +N K
Sbjct: 781 ERASAHGIPSAVVHHKEFDTRETFEQAIQQHLEQYKIDLVCLAGFMRILTPYFVNLWKGR 840
Query: 105 FYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISS 159
N H +LLP ++G + AI AG +G + ++ +D G + R VP+
Sbjct: 841 LLNTHPALLPAFKGMHGARMAIEAGVRISGCTVHFVEAEVDAGAIVCQRAVPVFP 895
>gi|329849570|ref|ZP_08264416.1| oxidoreductase family, NAD-binding Rossmann fold family protein
[Asticcacaulis biprosthecum C19]
gi|328841481|gb|EGF91051.1| oxidoreductase family, NAD-binding Rossmann fold family protein
[Asticcacaulis biprosthecum C19]
Length = 314
Score = 42.6 bits (98), Expect = 0.076, Method: Composition-based stats.
Identities = 16/197 (8%), Positives = 44/197 (22%), Gaps = 16/197 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++ G F + L L +V++ GRR ++ A ++ +P
Sbjct: 1 MKIALAGAGAFGIKHLDGLKKIDGVEVVALV-------GRRFEET-----KAVADKYGIP 48
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQR---ILNATKLGFYNGHASLLPRWRG 118
+ + + + I ++ +
Sbjct: 49 NTFTDLDEVLKLPEVDAVILCTPTQMHAAQAIACMKAGKHVQVEIPLADSWQDAQDVLET 108
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
M G + L ++++ + + L +
Sbjct: 109 QKATGLVCMVGHTRRFNPSHQYVHKLIQAGELNLQQMDVQTYFFRRTNMNALGQPRSWTD 168
Query: 179 VEAMDKLEQNNLPLSPQ 195
+ Q
Sbjct: 169 HLLWHHAAHTVDLFAYQ 185
>gi|260814894|ref|XP_002602148.1| hypothetical protein BRAFLDRAFT_234265 [Branchiostoma floridae]
gi|229287455|gb|EEN58160.1| hypothetical protein BRAFLDRAFT_234265 [Branchiostoma floridae]
Length = 215
Score = 42.6 bits (98), Expect = 0.077, Method: Composition-based stats.
Identities = 5/165 (3%), Positives = 17/165 (10%)
Query: 83 VAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDK 142
+ ++ F H +
Sbjct: 10 WIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWW 69
Query: 143 HLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITY 202
+ T + + +
Sbjct: 70 WIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWW 129
Query: 203 AEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHER 247
N++ + W +
Sbjct: 130 WIFTCLHWCSRGDLHMLLNIYWCWGIFTCVHWCWGIFTCIHWWWW 174
Score = 40.6 bits (93), Expect = 0.31, Method: Composition-based stats.
Identities = 8/193 (4%), Positives = 22/193 (11%), Gaps = 2/193 (1%)
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ T L + ++ F H
Sbjct: 9 WWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWW 68
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV--LCAHAMV 179
+ + T
Sbjct: 69 WWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWW 128
Query: 180 EAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEM 239
+ + I + I + + I +
Sbjct: 129 WWIFTCLHWCSRGDLHMLLNIYWCWGIFTCVHWCWGIFTCIHWWWWIFTCLHWCWGIFTC 188
Query: 240 MIGNKHERIKLLE 252
+ +
Sbjct: 189 VHWCWGIFTCIHW 201
Score = 39.5 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 5/152 (3%), Positives = 13/152 (8%)
Query: 95 QRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRK 154
+ F H + + T
Sbjct: 2 FTCIYWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGI 61
Query: 155 VPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVN 214
+ + +
Sbjct: 62 FTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGI 121
Query: 215 FCRSAENVHNHIRALSPFPGAWLEMMIGNKHE 246
F G ++
Sbjct: 122 FTCIHWWWWIFTCLHWCSRGDLHMLLNIYWCW 153
Score = 37.9 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 6/188 (3%), Positives = 20/188 (10%), Gaps = 3/188 (1%)
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
+ T L + ++ F H
Sbjct: 26 HWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCI 85
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAM 178
+ + T M
Sbjct: 86 HWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCSRGDLHM 145
Query: 179 ---VEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
+ + + + + +
Sbjct: 146 LLNIYWCWGIFTCVHWCWGIFTCIHWWWWIFTCLHWCWGIFTCVHWCWGIFTCIHWWWWI 205
Query: 236 WLEMMIGN 243
+ +
Sbjct: 206 FTCLHWCW 213
>gi|189240108|ref|XP_972976.2| PREDICTED: similar to glycinamide ribonucleotide
synthetase-aminoimidazole ribonucleotide
synthetase-glycinamide ribonucleotide transformylase
[Tribolium castaneum]
gi|270011705|gb|EFA08153.1| hypothetical protein TcasGA2_TC005772 [Tribolium castaneum]
Length = 999
Score = 42.6 bits (98), Expect = 0.085, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 62/173 (35%), Gaps = 35/173 (20%)
Query: 2 TLRVVFM----GTSEFAVATLQALVS------SSHSIVSVYTQPPRPAGRRGLKSVLSAV 51
+R+ + GT+ LQAL+ IV V + G R
Sbjct: 798 KMRIGVLISGSGTN------LQALIDGTQTADLGAEIVLVISNKDNVEGLR--------- 842
Query: 52 HKKAQEFSLPALVPTKLGQEEYEQFLSFNA--------DVAVVVAYGLVIPQRILNATKL 103
+A+ ++P V + E F ++ + + ++ K
Sbjct: 843 --RAERANIPTKVISHKAYPNREDFDRALHNELVYAGVELICLAGFMRILTGEFTAKWKG 900
Query: 104 GFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
N H +LLP ++G ++A+ AG +G + +++ +D G + VP
Sbjct: 901 KLINIHPALLPLFKGTHAQKQALEAGVRISGCTVHFVEEAVDGGHIITQEAVP 953
>gi|332090752|gb|EGI95845.1| bifunctional polymyxin resistance protein arnA domain protein
[Shigella dysenteriae 155-74]
Length = 420
Score = 42.6 bits (98), Expect = 0.085, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 252 ESQLVEGEGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
+ +PG VI+ IAC GA+ I+ Q G + ++ G +
Sbjct: 6 RVHPHASKAQPGSVISVAPLLIACGDGALEIVTGQAGDGITMQGSQLAQMLGLVQGSRL 64
>gi|308465795|ref|XP_003095155.1| hypothetical protein CRE_21497 [Caenorhabditis remanei]
gi|308246112|gb|EFO90064.1| hypothetical protein CRE_21497 [Caenorhabditis remanei]
Length = 1778
Score = 42.2 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 20/192 (10%), Positives = 44/192 (22%), Gaps = 9/192 (4%)
Query: 95 QRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRK 154
+ + H + A + R + + + + F
Sbjct: 999 MKHCFKNLANVKDVHCGYMQVMNANAELWRKKTTLAEDKKRFVGGREADIRLTTSYFRFP 1058
Query: 155 VPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVN 214
+ + + A Q +P+ E V+
Sbjct: 1059 TQSCNPDTALLVPNGKDEVMVFANKIKTLGELQFIATHAPKDAAEFWKMTLSQNPEFIVS 1118
Query: 215 FCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIAC 274
C E + + +L E P +V N T+ C
Sbjct: 1119 LCGDEEMKTLNCDYYPKKGEKPKKFGD---------FTVELTREEAAPNDVNKRNLTVTC 1169
Query: 275 SQGAVRIMRLQR 286
+ ++++ LQ
Sbjct: 1170 GEKSLQLTHLQP 1181
>gi|330000590|ref|ZP_08303736.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella sp. MS 92-3]
gi|328537962|gb|EGF64138.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella sp. MS 92-3]
Length = 485
Score = 42.2 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 8/120 (6%)
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIGNKHERIKLLE 252
PQ + TY + + + R+++ A+ +HN +R P+PGA+ + + +
Sbjct: 13 PQDHSQATYVGRRTPEDGRLDWELPAQTLHNLVRAVSDPWPGAFGYAGAN----KFIVWK 68
Query: 253 SQLVEG--EGKPGEVINPN-FTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCPVIIGCIV 309
S++ KPG V++ +AC GA+ I+ Q G + ++ G ++
Sbjct: 69 SRVRHDLPAAKPGTVLSIAPLIVACQDGALEIVTGQTERGVYMQGAQLAQALGLVSGAVI 128
>gi|299534538|ref|ZP_07047870.1| oxidoreductase ykwC [Lysinibacillus fusiformis ZC1]
gi|298729911|gb|EFI70454.1| oxidoreductase ykwC [Lysinibacillus fusiformis ZC1]
Length = 288
Score = 42.2 bits (97), Expect = 0.096, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQ 34
R+ F+GT + ++ L+ + H + VYT+
Sbjct: 3 KKRIAFIGTGVMGASIIKHLLKNGHEVT-VYTR 34
>gi|158337478|ref|YP_001518653.1| phosphoribosylglycinamide formyltransferase [Acaryochloris marina
MBIC11017]
gi|158307719|gb|ABW29336.1| phosphoribosylglycinamide formyltransferase [Acaryochloris marina
MBIC11017]
Length = 223
Score = 42.2 bits (97), Expect = 0.098, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 27/208 (12%)
Query: 2 TLRVVFM--GTSEFAVATLQAL----VSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
L++ M GT VA A+ +++ +V +Y P V ++A
Sbjct: 29 PLKLGIMASGTGSNFVAIADAIAQHHLAAHIQVV-IYNNPDA------------PVAQRA 75
Query: 56 QEFSLPALVPTKLGQEEYEQFLSF--------NADVAVVVAYGLVIPQRILNATKLGFYN 107
QE +P + E F + D V+V + + Q +++A N
Sbjct: 76 QERQIPTHLINHRHFSTREVFDQQIVDRLREADVDWVVMVGWMRRVTQVLIDAFPDRMIN 135
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQ 167
H SLLP + G I++A+ +G + + +D+GP+ VP+ A L
Sbjct: 136 IHPSLLPSFPGIRAIEQALEHQVKISGCTVHIVRLEVDSGPILIQAAVPVYPEDTPASLH 195
Query: 168 QELSVLCAHAMVEAMDKLEQNNLPLSPQ 195
+ + + +V+A+ +L QN L Q
Sbjct: 196 RRIQIQEHRIIVQAIAQLIQNRLTPCRQ 223
>gi|240850722|ref|YP_002972122.1| phosphoribosylglycinamide formyltransferase [Bartonella grahamii
as4aup]
gi|240267845|gb|ACS51433.1| phosphoribosylglycinamide formyltransferase [Bartonella grahamii
as4aup]
Length = 203
Score = 42.2 bits (97), Expect = 0.098, Method: Composition-based stats.
Identities = 39/174 (22%), Positives = 68/174 (39%), Gaps = 27/174 (15%)
Query: 1 MTLRVVFM----GTSEFAVATLQALVSSSH--SIVSVYTQPPRPAGRRGLKSVLSAVHKK 54
M ++V G++ A+A QA + IV+V PR G +K
Sbjct: 1 MKKQIVVFISGNGSNMVALA--QASQQKEYPAEIVAVICDNPRANGI-----------EK 47
Query: 55 AQEFSLPALVPTKLGQEEYEQFLS--------FNADVAVVVAYGLVIPQRILNATKLGFY 106
AQ +LP + + + E+ + D Y +I R + +
Sbjct: 48 AQNHNLPIHIVDRKIYKTKEEHEESIFTILDQYKPDFLCFAGYMRLISPRFVKLYEERIL 107
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSN 160
N H SLLP ++G ++A+ AG TG + + + +D G + VP+ +
Sbjct: 108 NIHPSLLPSFKGLNTHEKALQAGVKITGCTVHLVTEDMDAGKILAQAAVPVYPH 161
>gi|227326690|ref|ZP_03830714.1| hypothetical protein PcarcW_04934 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 318
Score = 42.2 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 40/270 (14%), Positives = 83/270 (30%), Gaps = 22/270 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSI-VSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+ VV G + AV ++ L+ I V T + G + + K +P
Sbjct: 1 MNVVVAGKNNIAVNFVEWLIEKYPEINVFGVTN----STDNGCDTFQRSYKKFCHSHGIP 56
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
L E + K +N H S LP+++G
Sbjct: 57 TLSLEDAYLVEGVFISLEFDKII-----------DTRKFKKSNCFNIHFSNLPKYKGMYT 105
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I+ + +TG+ ++D +DTG + ++ P+ N L + + +
Sbjct: 106 SAWPIINAEEKTGVTFHEIDNGIDTGDIISQKEFPLDGNETAGSLYLKYIHYGTKLIKDT 165
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
KL + Q +Y K S + + + +
Sbjct: 166 FPKLLEGKCERKKQSHINSSYYSKKSIDYKNIKIELNRTAFQIKQQINAF----TFRYYQ 221
Query: 242 GNKHERIKLLESQLVE--GEGKPGEVINPN 269
+ + +++++ K G V+ +
Sbjct: 222 LPQVLGYDIFGAKILDDKSSLKAGSVVEES 251
>gi|237751031|ref|ZP_04581511.1| methionyl-tRNA formyltransferase [Helicobacter bilis ATCC 43879]
gi|229373476|gb|EEO23867.1| methionyl-tRNA formyltransferase [Helicobacter bilis ATCC 43879]
Length = 291
Score = 42.2 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 101/265 (38%), Gaps = 27/265 (10%)
Query: 28 IVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVV 87
I V T + KS + + +P + ++ + +
Sbjct: 28 IECVVTHIIKT-----EKSYFDDIKEICCRNGIPFCLKDEISKFHKD-----------NN 71
Query: 88 AYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTG 147
+Y + I + + H SLLP++RG P+ +++ GD+ G++++ D G
Sbjct: 72 SYAVAIGWKWVIQGYSKIIVFHDSLLPKYRGFNPLVTSLINGDDTIGVSVLYGTNEYDKG 131
Query: 148 PVAFMRKVPISSNINTAGLQQELSVLCAH-AMVEAMDKLEQNNLPLSPQIENGITYAEKI 206
+ + + + +S I ++S L A + D +L Q TY+
Sbjct: 132 DIIYQKSMAVSYPITIWEAIGKISHLYADLCIKVLKDIQSNKSLIAKKQNHAEATYSLWR 191
Query: 207 SKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVE----GEGKP 262
+ + +N+ + + I A+ + +++ +K+L++++++
Sbjct: 192 DRQDYHINWQWDSARIVRFIDAV---GFPYDGAKTMFENKILKVLKAEVIKDVVVANRDC 248
Query: 263 GEVI---NPNFTIACSQGAVRIMRL 284
G+VI N + C G V++ +
Sbjct: 249 GKVIFMENKCCIVVCGIGLVKLCEV 273
>gi|115714377|ref|XP_001196774.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
purpuratus]
gi|115769962|ref|XP_781081.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
purpuratus]
Length = 279
Score = 42.2 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 36/267 (13%), Positives = 66/267 (24%), Gaps = 19/267 (7%)
Query: 41 RRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNA 100
RRG S V + QE L DV V V++G ++P+ ++ +
Sbjct: 4 RRGKTRKPSPVWEFCQEQHLTCHQWPLDDHIS-------GFDVGVTVSFGHLLPEWLIKS 56
Query: 101 TKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSN 160
L LL R + + L ++P
Sbjct: 57 FPLFDVG--PILLQREYNVPSNSTTKSLTHLLAKKGSEMLSEVLHNLTWFIEHEMPQREE 114
Query: 161 INTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAE 220
T GL+ + + D + E++ + SA
Sbjct: 115 GATLGLKIPNKLAWIDWGATSQDIYRLYRAVGEQMPLKTLFGGEEMRLEQMVSPADCSAL 174
Query: 221 NVHNHIRALSPF------PGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIAC 274
SP + + + + + + G N
Sbjct: 175 RWTLSSLFCSPILYGDHAACPYSKTDLTRPMYKSMCPVVEYFQQMSGTGTTSNEAML--- 231
Query: 275 SQGAVRIMRLQRAGGRVLDIGDFLLGC 301
G V + G + + +F G
Sbjct: 232 -DGWVGFCSVSPIGRKRMTAKEFYNGY 257
>gi|53714945|ref|YP_100937.1| hypothetical protein BF3660 [Bacteroides fragilis YCH46]
gi|52217810|dbj|BAD50403.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 400
Score = 42.2 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 95/283 (33%), Gaps = 20/283 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSI-VSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++ G + AV+ L+ I + V + G S + K A + +LP
Sbjct: 1 MKICIAGKNNIAVSVCSYLLKKYPDIPILVV----KNRTDNGTDSFQRSFWKFANDNNLP 56
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ FLS D + + +N H SLLP ++G
Sbjct: 57 MKELEDVYSIPDLIFLSLEFDRIIYPE----------RFSSSKLFNIHFSLLPAYKGMYT 106
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
I+ + +G+ + K+D +DTG + + + +S + L ++ + +VE
Sbjct: 107 SALPILHAEERSGVTLHKIDSGIDTGDILCQKAIMLSPSETAKSLYKKYIQVGTDLVVEN 166
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+D + + PQ Y K S + + + + + + +
Sbjct: 167 IDSILNDTYTTVPQSSEHSLYFSKSSLNYSDLELDLNVTAFQLSSQIRAFNFRDYQLPKL 226
Query: 242 GNKHERIKLLESQLVEGEGKPGEVINPN---FTIACSQGAVRI 281
+ +PG ++ + ++ +R+
Sbjct: 227 YGYSVVGACI--TNDRSTLRPGRILEDDCNYICLSTIDYNIRV 267
>gi|317492839|ref|ZP_07951263.1| phosphoribosylglycinamide formyltransferase [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316918961|gb|EFV40296.1| phosphoribosylglycinamide formyltransferase [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 212
Score = 42.2 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 74/199 (37%), Gaps = 28/199 (14%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHS------IVSVYTQPPRPAGRRGLKSVLSAVHKK 54
M +V + + + LQAL+ + H I +V++ G ++
Sbjct: 1 MK-NIVVLISGNGS--NLQALIDACHEGRIRARISAVFSNKADAYGL-----------ER 46
Query: 55 AQEFSLPALVPTKLGQEE--------YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFY 106
A +PA + + +++ D+ V+ Y ++ R +
Sbjct: 47 AAHDDIPAHYLDPKAFADRDAFDLALMHEIDNYHPDLVVLAGYMRILSPRFVQHYNGRML 106
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGL 166
N H SLLP++ G Q+A+ GD E G ++ + LD GPV KVPI + +
Sbjct: 107 NIHPSLLPKYPGLHTHQQALNNGDEEHGTSVHFVTDELDGGPVVLQAKVPIFEQDSEDEI 166
Query: 167 QQELSVLCAHAMVEAMDKL 185
+ + V +
Sbjct: 167 IERVQVQEHAIYPLVVSWF 185
>gi|229130828|ref|ZP_04259777.1| Methionyl-tRNA formyltransferase [Bacillus cereus BDRD-Cer4]
gi|229148401|ref|ZP_04276671.1| Methionyl-tRNA formyltransferase [Bacillus cereus BDRD-ST24]
gi|228635065|gb|EEK91625.1| Methionyl-tRNA formyltransferase [Bacillus cereus BDRD-ST24]
gi|228652633|gb|EEL08522.1| Methionyl-tRNA formyltransferase [Bacillus cereus BDRD-Cer4]
Length = 248
Score = 42.2 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 92/212 (43%), Gaps = 9/212 (4%)
Query: 78 SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAI 137
++NAD ++ Y ++ + IL+ K N H S LPR+ G AP G+ E G++
Sbjct: 18 NYNADYFIIANYQKILKEDILSIPKEDTINFHPSPLPRYAGLAPFFWMAKNGEKEGGVSC 77
Query: 138 MKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIE 197
+++ +D GP+ V +S +++ + + + K++ N+ Q+
Sbjct: 78 IQVVPEIDAGPILAQLPVVMSGTETALEIRETHFKQSIILLKQVLQKIKNNDFTSKLQLL 137
Query: 198 NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVE 257
+ TY + + + VN+ + E++ IRA P + + +E+I++L ++ E
Sbjct: 138 SNRTYYSQPKEEDYFVNWEQDIESILRTIRAGYPQGA----LAFNHYNEKIRILSAERTE 193
Query: 258 GEGKPGEV-----INPNFTIACSQGAVRIMRL 284
+ N ++ G + + +
Sbjct: 194 YPQPIQSIGVFREHNNKILVSTKDGWLHLQMI 225
>gi|260429320|ref|ZP_05783297.1| Trk potassium uptake system protein [Citreicella sp. SE45]
gi|260419943|gb|EEX13196.1| Trk potassium uptake system protein [Citreicella sp. SE45]
Length = 229
Score = 41.8 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRR 42
+RVV +G S F AT + L+ S H +V V P R R
Sbjct: 1 MRVVIVGASRFGQATAKELLESGHEVVLVDENPERLESAR 40
>gi|114332238|ref|YP_748460.1| phosphoribosylglycinamide formyltransferase [Nitrosomonas eutropha
C91]
gi|114309252|gb|ABI60495.1| formyltetrahydrofolate-dependent phosphoribosylglycinamide
formyltransferase [Nitrosomonas eutropha C91]
Length = 210
Score = 41.8 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 19/146 (13%)
Query: 19 QALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQF-- 76
QAL+ + + +V + P G A+E +PA + + F
Sbjct: 16 QALLKAGLPVAAVISNNPTAEGL-----------AFAREHGIPAHAIDHHAFPDRKTFDN 64
Query: 77 ------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGD 130
S+ + + + ++ + ++ + N H SLLP + G RA+ G
Sbjct: 65 ALAEIIDSYQPHLVALAGFMRILSETFVDHYQGRLINIHPSLLPAFPGLDTHTRALQEGV 124
Query: 131 NETGIAIMKMDKHLDTGPVAFMRKVP 156
G + + LD GP+ +P
Sbjct: 125 KIHGCTVHFVTSQLDHGPIIIQAAIP 150
>gi|291227340|ref|XP_002733644.1| PREDICTED: phosphoribosylglycinamide formyltransferase,
phosphoribosylglycinamide synthetase,
phosphoribosylaminoimidazole synthetase-like
[Saccoglossus kowalevskii]
Length = 1023
Score = 41.8 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 33/176 (18%)
Query: 2 TLRVVFM--GTSEFAVATLQALVS--------SSHSIVSVYTQPPRPAGRRGLKSVLSAV 51
++V + GT LQAL+ S I V + P G +GL
Sbjct: 817 KMKVAVLISGTGT----NLQALIDHTIDPKVGSCAEIALVISNIP---GVKGL------- 862
Query: 52 HKKAQEFSLPALVPTKLGQEEYEQFLSFNA--------DVAVVVAYGLVIPQRILNATKL 103
++A++ +P V + +F + + + ++ +
Sbjct: 863 -ERAEKAGIPTKVIRHKEFKSRVEFDMKVHETLASAGIEFICLAGFMRILSGEFVRKWHG 921
Query: 104 GFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISS 159
N H SLLP ++G + + AG TG ++ + + +D G + VP+
Sbjct: 922 RLINVHPSLLPSFKGMNAHKLVLEAGVRVTGCSVHFVVEEVDAGAIIVQEAVPVCP 977
>gi|218778491|ref|YP_002429809.1| formyl transferase domain protein [Desulfatibacillum alkenivorans
AK-01]
gi|218759875|gb|ACL02341.1| formyl transferase domain protein [Desulfatibacillum alkenivorans
AK-01]
Length = 339
Score = 41.8 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 44/309 (14%), Positives = 94/309 (30%), Gaps = 34/309 (11%)
Query: 19 QALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS---LPALVPTKLGQEEYEQ 75
+ L + + +V V+T P R ++ A+E +P +P + +
Sbjct: 23 KELRARKYEVV-VFTSP------RHSTEIMPGGATLARELDGAAIPWRMPEDVNSDSVFL 75
Query: 76 FLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGI 135
+ + + + ++ ++ ++ LPR+RG A I+ +
Sbjct: 76 EGATSLTMGMGFGEVWTFARKTIDRFDGKLFDFMGIPLPRYRGGAHYTWQILRQNRLGAC 135
Query: 136 AIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQ 195
I +++ + G V + A E E + +
Sbjct: 136 NIQVINEFMVQGEFDSGEIVYSREYRFPDSARIPQDYFDAAHKQEVDFLKEFMDRAEQGE 195
Query: 196 IENGITYAEKISKGETRVNFCRSAENVHNH---------IRALSPFPGAWLEMMIGNKHE 246
E+ S R+N + + P+ GA E+ +
Sbjct: 196 DFILSPVPEQYSMYFPRLNTLKQGWVDWSWGTKDLELFINAFDDPYAGASTEL--DGRLV 253
Query: 247 RIKLLESQLVEGEGKPG------EVINPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
R+K + ++G P + + IA QG++ I R+ G+ +
Sbjct: 254 RLKQARVETLDGPFHPFMTGLVYRINSTGVYIATPQGSLIIGRVLDEAGQDMTAA----- 308
Query: 301 CPVIIGCIV 309
V G
Sbjct: 309 --VKTGQRF 315
>gi|110679709|ref|YP_682716.1| Trk potassium uptake system protein [Roseobacter denitrificans
OCh 114]
gi|109455825|gb|ABG32030.1| Trk potassium uptake system protein [Roseobacter denitrificans
OCh 114]
Length = 216
Score = 41.8 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSV 31
+R+V +G S+F VAT + L+ H +V +
Sbjct: 1 MRIVIVGGSKFGVATAEQLIDKGHEVVLI 29
>gi|288960337|ref|YP_003450677.1| methionyl-tRNA formyltransferase [Azospirillum sp. B510]
gi|288912645|dbj|BAI74133.1| methionyl-tRNA formyltransferase [Azospirillum sp. B510]
Length = 236
Score = 41.8 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 17/156 (10%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+++V G F +AL S +V V P G R + + A++ +
Sbjct: 1 MKIVIAGQKWFGTEVFRAL-SPMVQVVLV----SAPRGDRLM--------EAARQAGIDT 47
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ L + D+ V I +R + G H SLLP RG I
Sbjct: 48 IEAGSLTSRTMPDDV----DLIVAAHSHDFISERTRLRARYGAIGYHPSLLPVHRGRDAI 103
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPIS 158
+ I D TG + +++ +D GP+ V +
Sbjct: 104 EWTIRMRDRITGGTVYRLNNRIDGGPILAQEHVHVQ 139
>gi|56695749|ref|YP_166100.1| non-ribosomal peptide synthetase [Ruegeria pomeroyi DSS-3]
gi|56677486|gb|AAV94152.1| non-ribosomal peptide synthetase [Ruegeria pomeroyi DSS-3]
Length = 1534
Score = 41.8 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 16/156 (10%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
M+L V +G + + L+ H I +V + + + A+ L
Sbjct: 1 MSLSHVVIGNESLLIGCSEMLLDRGHKIAAVVS-------------TDAEIAAWARGKGL 47
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ + D + +A VIP+ +L + G N H LPR+ G
Sbjct: 48 ---AHMRDLSDLDRHLAGAGFDWLLSIANLRVIPEALLALPRQGAINFHDGPLPRYAGLN 104
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
A+MAG+ G+ ++ +D G + +
Sbjct: 105 TPAWALMAGETRYGVTWHLIEGGIDEGDILAQQMFD 140
>gi|158313899|ref|YP_001506407.1| phosphoglycerate kinase [Frankia sp. EAN1pec]
gi|226699804|sp|A8KYR5|PGK_FRASN RecName: Full=Phosphoglycerate kinase
gi|158109304|gb|ABW11501.1| Phosphoglycerate kinase [Frankia sp. EAN1pec]
Length = 400
Score = 41.8 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 14 AVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHK-KAQEFSLPA 62
+V T+QAL+ + ++ V + RP G K L+ V + A+ +P
Sbjct: 42 SVPTIQALLDRNAKVI-VCSHLGRPKGAPEEKYSLAPVAERLAELLGIPV 90
>gi|317490608|ref|ZP_07949081.1| hypothetical protein HMPREF1023_02781 [Eggerthella sp. 1_3_56FAA]
gi|316910310|gb|EFV31946.1| hypothetical protein HMPREF1023_02781 [Eggerthella sp. 1_3_56FAA]
Length = 94
Score = 41.4 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 261 KPGEVI--NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLGCP-VIIG 306
+PGEV + + GA+ + L+ G + +D F G + G
Sbjct: 37 RPGEVRFAGKRLFLGMADGALEVGALKPDGKQTMDARSFAAGVQGIKDG 85
>gi|313672702|ref|YP_004050813.1| formyl transferase domain protein [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939458|gb|ADR18650.1| formyl transferase domain protein [Calditerrivibrio nitroreducens
DSM 19672]
Length = 279
Score = 41.4 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 10/68 (14%)
Query: 222 VHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEG---KPGEVIN---PNFTIACS 275
++ PF GA+ ERI + + +G +PGEV+ +AC
Sbjct: 194 YNHIRGFSRPFFGAFCFYEG----ERIVIWRGKPERWQGVYGEPGEVLKVTDDGIEVACG 249
Query: 276 QGAVRIMR 283
G V +
Sbjct: 250 NGTVILTE 257
>gi|327402096|ref|YP_004342934.1| methionyl-tRNA formyltransferase [Fluviicola taffensis DSM 16823]
gi|327317604|gb|AEA42096.1| Methionyl-tRNA formyltransferase [Fluviicola taffensis DSM 16823]
Length = 309
Score = 41.4 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 102/243 (41%), Gaps = 15/243 (6%)
Query: 53 KKAQEFSLPALVPTKLGQEE--YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
++++ LP D +++ ++ + +L+ K F N H
Sbjct: 46 QESENSGLPFRSFPNAESLSGLRNWIEEIQPDYIFSISFPFLLSEDVLSYGKNKFINFHP 105
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQEL 170
LP +RG P+ + + ET I++ M++ D G + K+ IS N L +L
Sbjct: 106 GPLPEYRGPMPLFEVLRYQEKETAISVHFMNEEFDEGAIILREKLSISQNETYGELATKL 165
Query: 171 SVLCAHAMVEAMDKLEQ-NNLPLSPQIENGITYAEKISKGETRVNFCRSA-ENVHNHIRA 228
S A + L+ + +P + Q ++ Y EK +T + + R + + I A
Sbjct: 166 SERTAMVALNMAHMLQFASTIPCNEQDQSRARYFEKPEVSDTFIQWNRMQADEIIALINA 225
Query: 229 LSPFPGAWLEMMIGNKHERIKLLESQLVE--GEGKPGEVIN----PNFTIACSQGAVRIM 282
+P+ M++G +KLL +++ E +PG++++ ++C +++
Sbjct: 226 CNPWNQGADTMLVGQS---VKLLAAKISEERHSDQPGKILHLTPTGAVAVSCIDE--KVI 280
Query: 283 RLQ 285
+Q
Sbjct: 281 HIQ 283
>gi|319404183|emb|CBI77776.1| phosphoribosylglycinamide formyltransferase [Bartonella rochalimae
ATCC BAA-1498]
Length = 203
Score = 41.4 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 61/170 (35%), Gaps = 19/170 (11%)
Query: 1 MTLRVVFM----GTSEFAVATLQALVSS------SHSIVSVYTQPPRPAGRRGLKSVLSA 50
M +++ G++ + L+ + IV+V P+ +G +
Sbjct: 1 MKKQIIVFISGNGSNMVS------LIKASQQTEYPAKIVAVICNNPQASGIKKAHDNNIP 54
Query: 51 VHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
+H ++ + + D+ Y ++ + K N H
Sbjct: 55 IHVVDRKN---YSTKKTHEEAILTILSQYQPDLICFAGYMQLVSSYFIKLYKERILNIHP 111
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSN 160
SLLP ++G ++A+ AG TG + + + +D G + VPI N
Sbjct: 112 SLLPLFKGLNTHEKALAAGVKITGCTVHLVTEEMDAGKILAQAAVPIHPN 161
>gi|114765857|ref|ZP_01444950.1| hypothetical protein 1100011001323_R2601_11174 [Pelagibaca
bermudensis HTCC2601]
gi|114541856|gb|EAU44893.1| hypothetical protein R2601_11174 [Roseovarius sp. HTCC2601]
Length = 35
Score = 41.4 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 280 RIMRLQRAGGRVLDIGDFLLGCPVIIGCIVG 310
++ R QRAG D FL G + G +G
Sbjct: 3 QVTRAQRAGKGAQDAETFLRGMAIPQGATLG 33
>gi|210633283|ref|ZP_03297748.1| hypothetical protein COLSTE_01661 [Collinsella stercoris DSM 13279]
gi|210159201|gb|EEA90172.1| hypothetical protein COLSTE_01661 [Collinsella stercoris DSM 13279]
Length = 69
Score = 41.4 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 5/29 (17%), Positives = 13/29 (44%)
Query: 265 VINPNFTIACSQGAVRIMRLQRAGGRVLD 293
+ + C G + ++ ++ G R +D
Sbjct: 23 IEGGRVFLGCGDGVLEVLSIKPDGKRKMD 51
>gi|83309354|ref|YP_419618.1| 4-carboxy-2-hydroxymuconate-6- semialdehydedehydrogenase
[Magnetospirillum magneticum AMB-1]
gi|82944195|dbj|BAE49059.1| 4-carboxy-2-hydroxymuconate-6- semialdehydedehydrogenase
[Magnetospirillum magneticum AMB-1]
Length = 320
Score = 41.4 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 50/181 (27%), Gaps = 9/181 (4%)
Query: 1 MTL--RVVFMGTSEFAVATLQAL-VSSSHSIVSVYTQP-PRPAGRRGLKSVLSAVHKKAQ 56
M+ + +G F V L AL V +VS+ ++P +P + H A+
Sbjct: 1 MSKPVNIALIGAGAFGVKHLDALSVIDGAQVVSLVSRPEDKPEEIAAKYGIPHVAHDLAE 60
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA-----S 111
+LP + L A + + IP A +
Sbjct: 61 SLALPHVDAVILTTPTQLHASQAMACLKAGKHVMVEIPMADNLADAEALVALQKKTGLVA 120
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
+ R P + + G I +MD + + L +
Sbjct: 121 MCGHTRRFNPSHQWVHNKITGGGFNIQQMDVQTYFFRRTNINALGQPRCWTDHLLWHHAA 180
Query: 172 V 172
Sbjct: 181 H 181
>gi|213621840|ref|ZP_03374623.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 522
Score = 41.4 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 167 QQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHI 226
+L + + ++ N+P PQ E+ TY + + +++ + VHN +
Sbjct: 24 HHKLCQAARQLLNSILPTMKCGNIPSVPQRESDATYYGRRRPEDGLIDWHKPVSTVHNLV 83
Query: 227 R-ALSPFPGAWLEMMIGNKHERIKLLESQLV-EGEGK-PGEVINPN-FTIACSQGAVRIM 282
R +P+PGA+ N ++ + S++ + +G PG VI+ + +AC+ GA+ I+
Sbjct: 84 RAVAAPWPGAF----SYNGSQKFTIWSSRICPDAQGALPGSVISVSPLRVACADGALEII 139
Query: 283 RLQ 285
Q
Sbjct: 140 TGQ 142
>gi|311895353|dbj|BAJ27761.1| hypothetical protein KSE_19370 [Kitasatospora setae KM-6054]
Length = 284
Score = 41.4 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 9/204 (4%)
Query: 79 FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIM 138
+ AD+AV + ++P L AT+LG N H S+LP++RG P+ AI GD E G+++
Sbjct: 79 YRADLAVCYGFPWLVPPEALRATRLGALNVHTSMLPKYRGPLPVNWAIRNGDEEIGVSVH 138
Query: 139 KMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIEN 198
M DTG + R ++ ++ + + P PQ E
Sbjct: 139 WMADGFDTGGILAQRAGIPLADDVLPEPLWREVDAHVEQLLPTALEQAERGSPGIPQDEA 198
Query: 199 GITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEG 258
+YA + +R+++ + VH+ +RA + R+++L + L+
Sbjct: 199 AASYAGWMEPAFSRIDWADARTAVHHQVRAFRFGSSGRSGPVAVVDGRRVRVLRTSLLPA 258
Query: 259 EGKPGEVINPNFTIACSQGAVRIM 282
+AC G + +
Sbjct: 259 ---------DGVEVACGDGPLWVT 273
>gi|121602889|ref|YP_989060.1| phosphoribosylglycinamide formyltransferase [Bartonella
bacilliformis KC583]
gi|120615066|gb|ABM45667.1| phosphoribosylglycinamide formyltransferase [Bartonella
bacilliformis KC583]
Length = 203
Score = 41.4 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 67/176 (38%), Gaps = 27/176 (15%)
Query: 1 MTLRVVFM----GTSEFAVATLQALVSSSH--SIVSVYTQPPRPAGRRGLKSVLSAVHKK 54
M +V+ G++ ++ +A + + I++V P AG +K
Sbjct: 1 MKKKVIIFISGNGSNMVSLV--KASKQTGYPAEIIAVICDNPHAAGI-----------EK 47
Query: 55 AQEFSLPALVPTKLGQEEYEQFLS--------FNADVAVVVAYGLVIPQRILNATKLGFY 106
A++ ++P + + E + D+ Y +I + +
Sbjct: 48 ARDNNIPIHIFDRKSYPSKETHEESILNILAQYQPDLICFAGYMRLISPHFIKLYENKIL 107
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNIN 162
N H SLLP ++G +R + AG +G + + + +D+G + VP+ N
Sbjct: 108 NIHPSLLPSFKGLNTHERVLEAGVKISGCTVHLVAEEMDSGKILAQAAVPVCPCDN 163
>gi|325119021|emb|CBZ54573.1| putative formyl transferase domain-containing protein [Neospora
caninum Liverpool]
Length = 903
Score = 41.0 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 267 NPNFTIACSQGAVRIMR-LQRAGGRVLDIGDFLLG 300
+ C G+V ++ LQR L DF G
Sbjct: 817 SGALRFVCGDGSVLLVEKLQRESRGPLSAPDFWNG 851
>gi|304390797|ref|ZP_07372749.1| phosphoribosylglycinamide formyltransferase [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
gi|315656426|ref|ZP_07909315.1| phosphoribosylglycinamide formyltransferase [Mobiluncus curtisii
subsp. holmesii ATCC 35242]
gi|304325680|gb|EFL92926.1| phosphoribosylglycinamide formyltransferase [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
gi|315492985|gb|EFU82587.1| phosphoribosylglycinamide formyltransferase [Mobiluncus curtisii
subsp. holmesii ATCC 35242]
Length = 214
Score = 41.0 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 55/155 (35%), Gaps = 25/155 (16%)
Query: 18 LQALVSS------SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQE 71
LQAL ++ IV V + G R AQ +P
Sbjct: 27 LQALYAATTNAAYGAEIVGVVSDRDTAEGLR-----------WAQSRGIPTATVCMGDFP 75
Query: 72 EYEQF--------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+ E + S+ D+ V + ++ + L N H SLLP + G +
Sbjct: 76 DRESWDVAFTAAVQSWEPDLIVSAGFLKILGPKFLAQWPSRVVNTHNSLLPSFVGIHGPR 135
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPIS 158
A+ AG G + +D +DTGP+ VP+
Sbjct: 136 DALRAGVKLAGATLFIVDPGMDTGPILAQVAVPVH 170
>gi|224418596|ref|ZP_03656602.1| hypothetical protein HcanM9_04902 [Helicobacter canadensis MIT
98-5491]
gi|253826856|ref|ZP_04869741.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313142123|ref|ZP_07804316.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253510262|gb|EES88921.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313131154|gb|EFR48771.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 272
Score = 40.6 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 38/258 (14%), Positives = 82/258 (31%), Gaps = 21/258 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSI--VSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+++ G + AV +L+ ++ + V+V P + G+ S ++ A +
Sbjct: 2 IKLCIAGKNNIAVNSLEYILKNHFKPDQVAVI--PNK--NDFGVDSWQKSLLHYAFNNHI 57
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+ + + + F S D V V +N H S LP+++G
Sbjct: 58 KVITLEEAYELKQIIFFSLEFDRIVKVE----------KFKSDKLFNMHFSALPKYKGVF 107
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
I+ + E+G+ + +D +DTG + PI+ N L + +
Sbjct: 108 TSITPILNNEVESGVTLHCIDNGIDTGNIIDQYIFPININDTARDLYFNYLSYGEYLFKK 167
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ ++ N Q +N + +
Sbjct: 168 NIQRIINNTYENFKQNN-----ISSSYFSRQDININHKINFKKTSFEIHNQIRAFIFKEY 222
Query: 241 IGNKHERIKLLESQLVEG 258
+ K+++S L
Sbjct: 223 QLPSINKTKIIKSTLTNE 240
>gi|229106644|ref|ZP_04236885.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock3-28]
gi|228676826|gb|EEL31431.1| Methionyl-tRNA formyltransferase [Bacillus cereus Rock3-28]
Length = 248
Score = 40.6 bits (93), Expect = 0.30, Method: Composition-based stats.
Identities = 42/212 (19%), Positives = 93/212 (43%), Gaps = 9/212 (4%)
Query: 78 SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAI 137
++NAD ++ Y ++ + IL+ K N H S LPR+ G AP +G+ E G++
Sbjct: 18 NYNADYFIIANYQKILKEDILSILKEDTINFHPSPLPRYAGLAPFFWMAKSGEKEGGVSC 77
Query: 138 MKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIE 197
+++ +D GP+ V +S +++ + + + K++ N+ Q+
Sbjct: 78 IQVVPEIDAGPILAQLPVVMSGTETALEIRETHFKQSIILLKQVLQKIKNNDFTSKLQLL 137
Query: 198 NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVE 257
+ TY + + + VN+ + E++ IRA P + +E+I++L ++ E
Sbjct: 138 SNRTYYSQPKEEDYFVNWEQDIESILRTIRAGYPQGA----LAFNQYNEKIRILSAERTE 193
Query: 258 GEGKPGEV-----INPNFTIACSQGAVRIMRL 284
+ + N ++ G + + +
Sbjct: 194 YPQQIQSIGVFREHNNKILVSTKDGWLHLQMI 225
>gi|49474326|ref|YP_032368.1| phosphoribosylglycinamide formyltransferase [Bartonella quintana
str. Toulouse]
gi|49239830|emb|CAF26223.1| Phosphoribosylglycinamide formyltransferase [Bartonella quintana
str. Toulouse]
Length = 203
Score = 40.6 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 37/179 (20%), Positives = 65/179 (36%), Gaps = 27/179 (15%)
Query: 1 MTLRVVFM----GTSEFAVATLQALVSSSH--SIVSVYTQPPRPAGRRGLKSVLSAVHKK 54
M ++V G++ ++A +A + I++V P AG +K
Sbjct: 1 MKKKIVVFISGNGSNMVSLA--KASQQQEYPAEIIAVICDNPHAAGI-----------EK 47
Query: 55 AQEFSLPALVPTKLGQEEYEQFL--------SFNADVAVVVAYGLVIPQRILNATKLGFY 106
A+ +LP V + E + D+ Y +I + +
Sbjct: 48 ARNNNLPTHVIDRKSYTTREAHEESIFTVLAEYKPDLLCFAGYMRLISPHFVKLYEERIL 107
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAG 165
N H SLLP ++G P +R + AG TG + + +D G + VP+ N
Sbjct: 108 NIHPSLLPSFKGLKPHERVLQAGVKITGCTVHLVTNDMDAGKILAQAAVPVCPNDTAEC 166
>gi|86749978|ref|YP_486474.1| Formyl transferase-like [Rhodopseudomonas palustris HaA2]
gi|86573006|gb|ABD07563.1| Formyl transferase-like [Rhodopseudomonas palustris HaA2]
Length = 196
Score = 40.6 bits (93), Expect = 0.32, Method: Composition-based stats.
Identities = 38/199 (19%), Positives = 72/199 (36%), Gaps = 12/199 (6%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ +G+ F VATL+ L S ++ V G R + A+ +
Sbjct: 1 MRITLVGSRHFGVATLEMLRSRGIAVPRVVV---ADGGDR--------LALAAETAGIAV 49
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ ++ + D+ V + + L A +LG H SLLPR RG A +
Sbjct: 50 -TVQASPKLVTAAEIAPDTDLIVAAHCHARVDRDALAAARLGGIGYHPSLLPRHRGIAAV 108
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
+ I GD G + + +D G +A + L + + ++ +
Sbjct: 109 EWTIREGDPIAGGTVYHLADRMDAGAIALQEWCFVHKGETARELWERVLAPLGIKLLAQV 168
Query: 183 DKLEQNNLPLSPQIENGIT 201
+ + L Q ++
Sbjct: 169 IDHARTHAELPAQPQDERF 187
>gi|294789005|ref|ZP_06754245.1| phosphoribosylglycinamide formyltransferase [Simonsiella muelleri
ATCC 29453]
gi|294483107|gb|EFG30794.1| phosphoribosylglycinamide formyltransferase [Simonsiella muelleri
ATCC 29453]
Length = 208
Score = 40.6 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 53/149 (35%), Gaps = 22/149 (14%)
Query: 19 QALVSS---SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL--------PALVPTK 67
QA+V++ + +V+V + P AG A E +
Sbjct: 16 QAIVNTAIPNAKVVAVLSNNPNAAGL-----------AWAAEHGIATAALNHKDFANRMD 64
Query: 68 LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127
+ + + D+ V+ + ++ + N H SLLP + G QRA+
Sbjct: 65 FDRAMMQLIDEYAPDLVVLAGFMRILTPEFCAHYENRCINIHPSLLPSFTGLHTHQRALD 124
Query: 128 AGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
G +G I + + LD G + VP
Sbjct: 125 EGCRISGCTIHFVTEVLDNGAIIAQGVVP 153
>gi|323488611|ref|ZP_08093855.1| hypothetical protein GPDM_04694 [Planococcus donghaensis MPA1U2]
gi|323397828|gb|EGA90630.1| hypothetical protein GPDM_04694 [Planococcus donghaensis MPA1U2]
Length = 218
Score = 40.3 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRR 42
M ++V +G F + + L S H I+++ T P + R
Sbjct: 1 MKKQIVVIGLGRFGSSVCKELHSLGHEIMAIDTNPDKVDALR 42
>gi|116492159|ref|YP_803894.1| 3-hydroxyisobutyrate dehydrogenase related beta-hydroxyacid
dehydrogenase [Pediococcus pentosaceus ATCC 25745]
gi|116102309|gb|ABJ67452.1| 3-hydroxyisobutyrate dehydrogenase related beta-hydroxyacid
dehydrogenase [Pediococcus pentosaceus ATCC 25745]
Length = 287
Score = 40.3 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPA 39
+++ F+GT + L+ + H + +V+T+ A
Sbjct: 1 MKIGFIGTGVMGSGIIHNLLKNGHDV-AVFTRTKSKA 36
>gi|116070616|ref|ZP_01467885.1| Methionyl-tRNA formyltransferase [Synechococcus sp. BL107]
gi|116066021|gb|EAU71778.1| Methionyl-tRNA formyltransferase [Synechococcus sp. BL107]
Length = 280
Score = 40.3 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 74/247 (29%), Positives = 118/247 (47%), Gaps = 27/247 (10%)
Query: 72 EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDN 131
+ + D++VVVA+G ++P+ +L LG +NGH SLLPRWRGA PIQ A++ GD+
Sbjct: 15 CQNELANLKPDISVVVAFGQILPKSVLEQPPLGCWNGHGSLLPRWRGAGPIQWALLEGDS 74
Query: 132 ETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNL- 190
ETG+ IM M++ LDTGPV +++PI N + ELS L A MVEAMD + + +
Sbjct: 75 ETGVGIMAMEEGLDTGPVLLEQRIPICLCQNAETVAMELSQLTAKLMVEAMDLIFKAGMG 134
Query: 191 -------PLSPQIENGITYAEKI-SKGETRVNFCRSAENVHNHIRALSP-----FPGAWL 237
L+ Q + + ++ K + ++N+ SA H + L P + L
Sbjct: 135 SEAERLIRLNVQNQGQKSSYARMLKKDDFQINWNDSALLTHRKVMGLYPSAYTIWRNKRL 194
Query: 238 EMMIGNKHERI---------KLLESQLVEGEGKPGEVI----NPNFTIACSQGAVRIMRL 284
++ ++L Q G +PG V+ + ++ S + I
Sbjct: 195 KLTDTEPLIERFRDEISADARVLLGQWSTGGDQPGTVLACINHVGIVVSTSGCPILIREA 254
Query: 285 QRAGGRV 291
Q G
Sbjct: 255 QLEGKGR 261
>gi|83749948|ref|ZP_00946904.1| UDP-4-amino-4-deoxy-L-arabinose N-formyltransferase [Ralstonia
solanacearum UW551]
gi|83723392|gb|EAP70614.1| UDP-4-amino-4-deoxy-L-arabinose N-formyltransferase [Ralstonia
solanacearum UW551]
Length = 67
Score = 40.3 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 18/54 (33%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKK 54
MT R V V L+ L I V + A L +V + H+
Sbjct: 1 MTRRAVVFAYHNVGVRCLRVLADRGIHIKLVVSHEDNSANHIWLINVHPSTHEL 54
>gi|291333897|gb|ADD93577.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S04-C385]
Length = 135
Score = 40.3 bits (92), Expect = 0.38, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 6/118 (5%)
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
A + + L Q E +Y KI++ + + + A+ + I A+ P P
Sbjct: 6 AKEVNKFCSDWPNLIDNLEEQNETDASYCPKITRNDAVIEWSDEAKKISKTINAMYPNPI 65
Query: 235 AWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMRLQRAGG 289
+++ + + +L+ G PGE+I I C AV + L R G
Sbjct: 66 ISIDVNGVGINLCKSKVNKKLI---GDPGEIIEFNKDILAIGCGDFAVEVTELCRIGK 120
>gi|291301961|ref|YP_003513239.1| formyl transferase domain-containing protein [Stackebrandtia
nassauensis DSM 44728]
gi|290571181|gb|ADD44146.1| formyl transferase domain protein [Stackebrandtia nassauensis DSM
44728]
Length = 564
Score = 40.3 bits (92), Expect = 0.39, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 77/266 (28%), Gaps = 16/266 (6%)
Query: 54 KAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLL 113
+A+ + + + + A +++ L K H +
Sbjct: 22 RARGHEVTVELAPAYDSPDALTAMIHAAAPDLILCPFLKHRVPAQVWQKWPTVIIHPGPV 81
Query: 114 PRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVL 173
RG + + AIM + + G+ + + +D GPV R P+ V
Sbjct: 82 G-DRGPSSLDYAIMDRERQWGVTALSAVEEMDAGPVWASRIFPMPDEPVAKAELYNGPVA 140
Query: 174 CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFP 233
A A + + P + ++ + ++ +
Sbjct: 141 DAALSCIAEVVDKAADPQYQPMSQETMSRPVASASTRPQLRRADRVFEWTRSAAEIVRRV 200
Query: 234 GAWLE---MMIGNKHERIKLLESQLVE---GEGKPGEVIN---PNFTIACSQGAVRIMRL 284
A + + +++ ++ + E PG ++ +A V I ++
Sbjct: 201 HAADSAPGVRSEIEGTTVQVYDAAVGEPRTHSATPGTIVGRSGDAIAVAAGDADVWIGQV 260
Query: 285 QRAGGRVLDIGDFLLGCPVIIGCIVG 310
R LD G + G + G
Sbjct: 261 ----KRPLDAH--GNGIKLPAGYVFG 280
>gi|254463349|ref|ZP_05076765.1| Luciferase-like monooxygenase family [Rhodobacterales bacterium
HTCC2083]
gi|206679938|gb|EDZ44425.1| Luciferase-like monooxygenase family [Rhodobacteraceae bacterium
HTCC2083]
Length = 1496
Score = 40.3 bits (92), Expect = 0.42, Method: Composition-based stats.
Identities = 47/283 (16%), Positives = 90/283 (31%), Gaps = 26/283 (9%)
Query: 6 VFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
+ +G+ + + + + +++ V T + V A L L
Sbjct: 8 ILIGSESLTIEAGRQMRARGYAVRVVVTH-------------SADVRAWAASEGLDVLNF 54
Query: 66 TKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRA 125
E D VA +I +L G N H LP++ G A
Sbjct: 55 APDIAARLE-----PVDWIFSVANLEIISSDVLALASKGAVNFHDGPLPKYAGLNAPVWA 109
Query: 126 IMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKL 185
++ G+ G++ ++ +D G + + I ++ L + + D +
Sbjct: 110 LLNGEETHGVSWHLIEGGVDEGRILTQQMFDIRASDTAFSLNAKCFDAGVQSFPRVFDAI 169
Query: 186 EQNNLPLSPQIENGITYA----EKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
E + L + Q + +Y G R + P+ +
Sbjct: 170 EGDALGATAQELSERSYFGLSARPKDHGFVDPTQSRDKAMRLVNAMDHGPYWNPLCTAKL 229
Query: 242 GNKHERIKLLESQLVEGEG-KPGEVIN---PNFTIACSQGAVR 280
++L +L G + GEV+ N TI + GAVR
Sbjct: 230 LVNDTVLQLGSCELDTRSGAQSGEVLAIGADNITIGFADGAVR 272
>gi|74353527|gb|AAI03936.1| ALDH1L2 protein [Homo sapiens]
Length = 488
Score = 40.3 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 256 VEGEGKPGEVINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFL 298
++G KPG V + + G A+ + LQ G+++ +
Sbjct: 22 IKGAKKPGLVTKNGLVLFGNDGKALTVRNLQFEDGKMIPASQYF 65
>gi|50949792|emb|CAH10368.1| hypothetical protein [Homo sapiens]
Length = 291
Score = 40.3 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 256 VEGEGKPGEVINPNFTIACSQG-AVRIMRLQRAGGRVLDIGDFL 298
++G KPG V + + G A+ + LQ G+++ +
Sbjct: 64 IKGAKKPGLVTKNGLVLFGNDGKALTVRNLQFEDGKMIPASQYF 107
>gi|17230850|ref|NP_487398.1| 3-hydroxyacid dehydrogenase [Nostoc sp. PCC 7120]
gi|17132453|dbj|BAB75057.1| 3-hydroxyacid dehydrogenase [Nostoc sp. PCC 7120]
Length = 292
Score = 39.9 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 17/50 (34%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVS-----------------VYTQP 35
++V F+GT + Q L++++ +V+ V T P
Sbjct: 1 MKVAFLGTGLMGLPMAQRLLAANIEVVAYNRTPEKLAPLQAAGAEVVTHP 50
>gi|294638398|ref|ZP_06716640.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Edwardsiella tarda ATCC 23685]
gi|291088478|gb|EFE21039.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Edwardsiella tarda ATCC 23685]
Length = 183
Score = 39.9 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 228 ALSPFPGAWLEMMIGNKHERIKLLESQ-LVEGEGK-PGEVINPN-FTIACSQGAVRIMRL 284
P+PGA+ + ++ + S+ + + +GK PG VI+ IAC++GA+ ++
Sbjct: 12 VTEPYPGAFTFLGER----KMIIWRSRAVADNQGKRPGTVISTEPLVIACAKGAIEVVTG 67
Query: 285 QRAGG 289
Q G
Sbjct: 68 QSENG 72
>gi|73537961|ref|YP_298328.1| UDP-glucose/GDP-mannose dehydrogenase [Ralstonia eutropha JMP134]
gi|72121298|gb|AAZ63484.1| UDP-glucose/GDP-mannose dehydrogenase:Prephenate
dehydrogenase:NADP oxidoreductase, coenzyme
F420-dependent:6-phosphogluconate dehydrogenase,
NAD-binding [Ralstonia eutropha JMP134]
Length = 294
Score = 39.9 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 6/28 (21%), Positives = 17/28 (60%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVS 30
+R+ F+GT + + + + ++ H +V+
Sbjct: 1 MRIGFIGTGKMGLPMARHIAAAGHDVVA 28
>gi|307191271|gb|EFN74918.1| Trifunctional purine biosynthetic protein adenosine-3 [Camponotus
floridanus]
Length = 1008
Score = 39.9 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 68/183 (37%), Gaps = 27/183 (14%)
Query: 18 LQALVSS--------SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLG 69
LQ+L+S+ IV V + P G GLK +A++ + +V
Sbjct: 820 LQSLISATQDSSQNIGAEIVLVISNKP---GVEGLK--------RAEKAGIKTVVIKHSD 868
Query: 70 QEEYEQFLSFNA--------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E F + ++ + + ++ + + + N H SLLP ++GA
Sbjct: 869 YPNRESFDAAMNVELNAAGVEIVCLAGFMRILSEHFVKHWRGAMLNIHPSLLPAFKGANA 928
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ + A +G + ++ +D+G + VP+ + LQ+ + A
Sbjct: 929 HKDVLAARVRVSGCTVHFVEVDIDSGAIVEQEAVPVFPDDTEKILQERVKAAEHRIYPCA 988
Query: 182 MDK 184
+
Sbjct: 989 LKY 991
>gi|160897642|ref|YP_001563224.1| NAD-dependent epimerase/dehydratase [Delftia acidovorans SPH-1]
gi|160363226|gb|ABX34839.1| NAD-dependent epimerase/dehydratase [Delftia acidovorans SPH-1]
Length = 217
Score = 39.9 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 3 LRVVFMG-TSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
++V +G T A L+ L+ H +V++ P + A + L++V + V A
Sbjct: 1 MKVALIGATGFVGSAVLKELLQRGHEVVALVRDPAKLAAQPRLQAVQADVLDAA 54
>gi|169837131|ref|ZP_02870319.1| methionyl-tRNA formyltransferase [candidate division TM7
single-cell isolate TM7a]
Length = 156
Score = 39.9 bits (91), Expect = 0.49, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 271 TIACSQGAVR-IMRLQRAGGRVLDIGDFLLGCP 302
TIAC + I + G+ + I D+L G
Sbjct: 117 TIACKDDTLLSIDEIIAPSGKHMKIKDYLNGIR 149
>gi|158339557|ref|YP_001520946.1| formyl transferase domain-containing protein [Acaryochloris marina
MBIC11017]
gi|158309798|gb|ABW31414.1| formyl transferase domain protein [Acaryochloris marina MBIC11017]
Length = 577
Score = 39.9 bits (91), Expect = 0.51, Method: Composition-based stats.
Identities = 31/212 (14%), Positives = 61/212 (28%), Gaps = 15/212 (7%)
Query: 100 ATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISS 159
+ H + RG + I AI+ ++E G+ ++ D +D G + P+
Sbjct: 65 WKQHLCIIIHPG-IKGDRGPSSIDWAILEDESEWGVTALQADAEMDAGDIWASINFPLEG 123
Query: 160 NINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNF-CRS 218
+ + + + + + + P + +
Sbjct: 124 ETKSDLYRGKGAQAAITCIKQTLANFIDPKYQPEPLDYGNPDVKGTWRNPLKQSHRAISW 183
Query: 219 AENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEG-EGKPGEVINPN---FTIAC 274
+ I + ++ E+ L + GKPGE+I A
Sbjct: 184 ESDTTAEIVRKIRSADSQPGLLDVLFGEQFYLYGAHPENTLTGKPGELIAQRYGAICRAT 243
Query: 275 SQGAVRIMRLQRAGGR-------VLDIGDFLL 299
GAV I L+R + L L
Sbjct: 244 IDGAVWITHLKR--KKKEEQVFFKLPAAQVLR 273
>gi|148255710|ref|YP_001240295.1| putative methionyl-tRNA formyltransferase [Bradyrhizobium sp.
BTAi1]
gi|146407883|gb|ABQ36389.1| putative Methionyl-tRNA formyltransferase [Bradyrhizobium sp.
BTAi1]
Length = 197
Score = 39.9 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 36/155 (23%), Positives = 55/155 (35%), Gaps = 16/155 (10%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQ--PPRPAGRRGLKSVLSAVHKKAQEFSL 60
+R+ +G+ F VATL L I V R + A+ +
Sbjct: 1 MRITLVGSRHFGVATLNMLRERGIEIARVVVHDGEDR-------------LAAAARAAGI 47
Query: 61 PALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
LV + + D+ V + Q + A LG H SLLPR RG A
Sbjct: 48 EVLVQANPKVVPANEI-APGTDLIVTAHSHARVTQEAVQAAPLGGIGYHPSLLPRHRGIA 106
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKV 155
++ + GD G I + + +D G +A
Sbjct: 107 AVEWTVKEGDPIAGGTIYHLAERMDAGAIAAQDWC 141
>gi|126662754|ref|ZP_01733753.1| methionyl-tRNA formyltransferase [Flavobacteria bacterium BAL38]
gi|126626133|gb|EAZ96822.1| methionyl-tRNA formyltransferase [Flavobacteria bacterium BAL38]
Length = 298
Score = 39.9 bits (91), Expect = 0.54, Method: Composition-based stats.
Identities = 48/278 (17%), Positives = 100/278 (35%), Gaps = 25/278 (8%)
Query: 14 AVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEE 72
+A L+ +++ S + V + K + + ++
Sbjct: 18 GLACLETMLNCISVELKFVIYATDKNVE----KDYADEIIALCNKHNV------------ 61
Query: 73 YEQFLSFNADVAVVVAYGLVIPQRILNATK---LGFYNGHASLLPRWRGAAPIQRAIMAG 129
+ + D ++ + I K H S+LP++RG P+ A++ G
Sbjct: 62 -LCYNRNSFDETLLNSVSYYIAISWRWLIKSDLEKLIVFHDSILPKYRGFNPLVTALING 120
Query: 130 DNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNN 189
D E G+ + +K D G + K PIS I + +SV +++ ++ N
Sbjct: 121 DEEIGVTAIFANKEFDNGAILGTEKTPISYPIKISEAIDIISVCYQDLVMKIGKEIANNT 180
Query: 190 LPLSPQIENGITYAEKISKGETRVNFC-RSAENVHNHIRALSPFPGAWLEMMIGNKHERI 248
L +PQ EN T++ + + +++ + P+ GA +M
Sbjct: 181 LVATPQDENQATFSLWRDEEDYYIDWSLDALVLERTINALGFPYGGARSKMDDKIIILDE 240
Query: 249 KLLESQLVEGEGKPGEVI---NPNFTIACSQGAVRIMR 283
+ + G+++ N TI C G ++I +
Sbjct: 241 VKALNDVKIENRTSGKILFLDNNQPTIVCGNGLIKIEK 278
>gi|83644761|ref|YP_433196.1| putative intracellular protease/amidase [Hahella chejuensis KCTC
2396]
gi|83632804|gb|ABC28771.1| putative intracellular protease/amidase [Hahella chejuensis KCTC
2396]
Length = 186
Score = 39.5 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 14/60 (23%)
Query: 1 MTLRVVFMGTSEFA------VATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKK 54
MT +++ + T +FA V QAL + + + +V P + G SV +A+H
Sbjct: 1 MTKKILII-TGDFAEDYELMVP-FQALQAMGYEVAAVC--PDKKQGD----SVATAIHDF 52
>gi|319405629|emb|CBI79252.1| phosphoribosylglycinamide formyltransferase [Bartonella sp. AR
15-3]
Length = 203
Score = 39.5 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 60/170 (35%), Gaps = 19/170 (11%)
Query: 1 MTLRVVFM----GTSEFAVATLQALVSS------SHSIVSVYTQPPRPAGRRGLKSVLSA 50
M +++ G++ + L+ + I +V P AG + +
Sbjct: 1 MKKQIIVFISGNGSNMVS------LIKASQQTEYPAKIAAVICDNPHAAGIKKARDNNVP 54
Query: 51 VHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
+H ++ + + D+ Y ++ + + N H
Sbjct: 55 IHVVDRKN---YPTKETHEENILTILSQYQPDLICFAGYMRLVSSYFIKLYEERILNIHP 111
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSN 160
SLLP ++G ++A+ AG TG + + + +D G + VPI +
Sbjct: 112 SLLPLFKGLNTHEKALAAGMKITGCTVHLVTEKIDAGKILAQAAVPIHPH 161
>gi|221195664|ref|ZP_03568718.1| 6-phosphogluconate dehydrogenase NAD-binding [Atopobium rimae
ATCC 49626]
gi|221184430|gb|EEE16823.1| 6-phosphogluconate dehydrogenase NAD-binding [Atopobium rimae
ATCC 49626]
Length = 374
Score = 39.5 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 7/31 (22%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHSIVSVYTQ 34
++ F+GT V + ++ + + + VYT+
Sbjct: 8 KIAFIGTGIMGVPIAEHILDAGYDVT-VYTR 37
>gi|319407200|emb|CBI80839.1| phosphoribosylglycinamide formyltransferase [Bartonella sp. 1-1C]
Length = 203
Score = 39.5 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 61/169 (36%), Gaps = 19/169 (11%)
Query: 1 MTLRVVFM----GTSEFAVATLQALVSS------SHSIVSVYTQPPRPAGRRGLKSVLSA 50
M +++ G++ + L+ + IV+V P+ AG +
Sbjct: 1 MKKQIIVFISGDGSNMVS------LIKASQQTEYPAKIVAVICDNPQAAGIKKAHDNNIP 54
Query: 51 VHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
+H ++ + + D+ Y +I + + N H
Sbjct: 55 IHVVDRKN---YPTKKTHEEAILAILSQYQPDLICFAGYMQLISSYFIKLYEERILNIHP 111
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISS 159
SLLP ++G ++A+ AG TG + + + +D+G + VPI
Sbjct: 112 SLLPLFKGLNTHEKALAAGAKITGCTVHLVTEEMDSGKILAQAAVPIHP 160
>gi|241764898|ref|ZP_04762900.1| D-amino-acid dehydrogenase [Acidovorax delafieldii 2AN]
gi|241365557|gb|EER60299.1| D-amino-acid dehydrogenase [Acidovorax delafieldii 2AN]
Length = 657
Score = 39.5 bits (90), Expect = 0.62, Method: Composition-based stats.
Identities = 24/277 (8%), Positives = 64/277 (23%), Gaps = 13/277 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++ + +G ++T L+ H ++ V QP A +
Sbjct: 7 PMKTIVLGAGIIGISTAWHLLERGHEVIVVDRQPDAALET-----------SFANAAQIS 55
Query: 62 A-LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+E + L + D + + + + + R
Sbjct: 56 VSYCEPWANREAPWKALKWMFDKEAPLLFRPQLDWDQWRWCLQFLAQCNDTAFERNVQQI 115
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
A + + ++ H +A S + ++ +V
Sbjct: 116 VALGAYSHAALKDVVRATGIEYHRLERGIAHFYSDQKSFDDAGRAVEVMRKFGVQRRLVS 175
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L+ + + F + + L +
Sbjct: 176 RDELLQIEPAFQAYGDRITGGTYTSTDESGDARVFTQELARRCAARGVQFLYGHDVLRLN 235
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVIN-PNFTIACSQ 276
+ ++ GK ++ +AC
Sbjct: 236 KVGDAIDSVAVMARQSSAVGKKDFILKGDAIVVACGS 272
>gi|225023076|ref|ZP_03712268.1| hypothetical protein CORMATOL_03124 [Corynebacterium matruchotii
ATCC 33806]
gi|224944299|gb|EEG25508.1| hypothetical protein CORMATOL_03124 [Corynebacterium matruchotii
ATCC 33806]
Length = 208
Score = 39.5 bits (90), Expect = 0.63, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 7/154 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS--SHSIVSVYTQPPRPAGRRGLK-SVLSAVHKKAQEF 58
LR+V + + + LQ+++ + + +V V + PA R + ++ + + + A+
Sbjct: 10 ALRIVVLASG--SGTLLQSILDNQGKYQVVGVVSDVECPALDRARQAAIPAELVELARGA 67
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
E L DV V + ++ L+ N H +LLP + G
Sbjct: 68 DPQVREEWNERLAEVVDRLQ--PDVVVSAGFMKILGAPFLSRFGGRTINTHPALLPAFPG 125
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFM 152
A ++ A+ G TG + +D +DTGP+
Sbjct: 126 AHAVRDALAYGVKVTGSTVHFVDAGVDTGPIIAQ 159
>gi|255014205|ref|ZP_05286331.1| formyl transferase domain protein [Bacteroides sp. 2_1_7]
Length = 286
Score = 39.5 bits (90), Expect = 0.64, Method: Composition-based stats.
Identities = 42/235 (17%), Positives = 89/235 (37%), Gaps = 5/235 (2%)
Query: 53 KKAQEFSLPALVPTKLGQEEYE-QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHAS 111
+ A++ L K+ + + Q + + D+ VV ++ + I+ +L H +
Sbjct: 3 RFAEDNHLSYYPFIKINSNDIKEQIRNASVDILFVVGVSQLVDEDIIRLPRLACVGFHPT 62
Query: 112 LLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELS 171
LP+ RG AP ++ E K+D + D G + I + + + +L
Sbjct: 63 KLPKGRGRAP-MAWLILDKGEGAATFFKIDTNADEGDIFVQEPFSIREDDDVTSIGVKLK 121
Query: 172 VLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSP 231
A+ + L L PQ T+ + + + +++ +A+++ I+A +
Sbjct: 122 EAMVRALDRWLPSLSSVGLKGIPQDGKAATFYARRAPLDGCIDWSNTAKDIDRLIKASTS 181
Query: 232 FPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVIN---PNFTIACSQGAVRIMR 283
NK K +G G V+N N + + G V +++
Sbjct: 182 PHPGAFSFYGNNKVLVWKSNYYASGYAKGVIGRVVNFNNDNPVVQTADGYVELVK 236
>gi|328884373|emb|CCA57612.1| oxidoreductase ylbE [Streptomyces venezuelae ATCC 10712]
Length = 220
Score = 39.5 bits (90), Expect = 0.69, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 1 MTLRVVFMGTS-EFAVATLQALVSS-SHSIVSVYTQPPRPAGRR 42
M++R+V G + A+ L+ L+S+ H + + +P + R
Sbjct: 1 MSMRIVIAGGHGQIALR-LERLLSAGGHEVAGIIRRPEQAGDLR 43
>gi|20807086|ref|NP_622257.1| phosphoribosylglycinamide formyltransferase [Thermoanaerobacter
tengcongensis MB4]
gi|20515577|gb|AAM23861.1| Folate-dependent phosphoribosylglycinamide formyltransferase PurN
[Thermoanaerobacter tengcongensis MB4]
Length = 207
Score = 39.5 bits (90), Expect = 0.70, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 33/158 (20%)
Query: 3 LRVVFM----GTSEFAVATLQALVSS------SHSIVSVYTQPPRPAGRRGLKSVLSAVH 52
+R+V M GT LQ+++ + I+ V + +
Sbjct: 1 MRLVVMASGNGTD------LQSIIDAIEAGYIKAQIIGVVS--DKKEAY---------AL 43
Query: 53 KKAQEFSLPALV------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFY 106
++A++ +PA +E S N D ++ + ++ + I+
Sbjct: 44 ERAKKHGIPAYCLRKKELKENFFKELLSLLESLNPDGIILAGFLTILSEEIVERFPNKII 103
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHL 144
N H SL+P + G + + G+ H
Sbjct: 104 NIHPSLIPAFCGKGFYGMRVHQAVYDYGVKYTGCTVHF 141
>gi|305682019|ref|ZP_07404823.1| phosphoribosylglycinamide formyltransferase [Corynebacterium
matruchotii ATCC 14266]
gi|305658492|gb|EFM47995.1| phosphoribosylglycinamide formyltransferase [Corynebacterium
matruchotii ATCC 14266]
Length = 208
Score = 39.5 bits (90), Expect = 0.73, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 7/154 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSS--SHSIVSVYTQPPRPAGRRGLK-SVLSAVHKKAQEF 58
LR+V + + + LQ+++ + + +V V + PA R + ++ + + + A+
Sbjct: 10 ALRIVVLASG--SGTLLQSILDNQGKYQVVGVVSDVECPALDRARQAAIPAELVELARGA 67
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
E L DV V + ++ L N H +LLP + G
Sbjct: 68 DPQVREEWNERLAEVVDRLQ--PDVVVSAGFMKILGAPFLLRFGGRTINTHPALLPAFPG 125
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFM 152
A ++ A+ G TG + +D +DTGP+
Sbjct: 126 AHAVRDALAYGVKVTGSTVHFVDAGVDTGPIIAQ 159
>gi|149236299|ref|XP_001524027.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452403|gb|EDK46659.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 343
Score = 39.5 bits (90), Expect = 0.73, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 10/66 (15%)
Query: 1 MTLRVVFMG-TSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSA-------VH 52
M +++ G T A L L+ ++++V+ T + G LK S V
Sbjct: 1 MPAKIILSGATGFIAQHILSELLQQNYTVVA--TVRSKAKGDHLLKLFSSPSNLSYVVVE 58
Query: 53 KKAQEF 58
A+
Sbjct: 59 DVAKPH 64
>gi|126649862|ref|ZP_01722098.1| 3-hydroxyisobutyrate dehydrogenase [Bacillus sp. B14905]
gi|126593581|gb|EAZ87526.1| 3-hydroxyisobutyrate dehydrogenase [Bacillus sp. B14905]
Length = 295
Score = 39.1 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSSHSIVSVYTQ 34
M R+ F+GT + ++ L+ + H + VYT+
Sbjct: 8 MKKQRIAFIGTGVMGTSIIKHLLKNDHEVT-VYTR 41
>gi|145346850|ref|XP_001417895.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578123|gb|ABO96188.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 283
Score = 39.1 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 5/27 (18%), Positives = 15/27 (55%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIV 29
+++ F+G V + L+++ H ++
Sbjct: 1 MKIAFLGCGIMGVPMAKNLLNAGHEVI 27
>gi|15789556|ref|NP_279380.1| hypothetical protein VNG0267H [Halobacterium sp. NRC-1]
gi|169235267|ref|YP_001688467.1| hypothetical protein OE1417F [Halobacterium salinarum R1]
gi|10579904|gb|AAG18860.1| hypothetical protein VNG_0267H [Halobacterium sp. NRC-1]
gi|167726333|emb|CAP13114.1| conserved hypothetical protein [Halobacterium salinarum R1]
Length = 297
Score = 39.1 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPP 36
+RV +G A + L+++ H +V V P
Sbjct: 1 MRVAILGCGYVGCALARRLLAAGHDVVGVCRSPD 34
>gi|254567447|ref|XP_002490834.1| hypothetical protein [Pichia pastoris GS115]
gi|238030630|emb|CAY68554.1| hypothetical protein PAS_FragB_0024 [Pichia pastoris GS115]
gi|328351217|emb|CCA37617.1| Inositol 2-dehydrogenase [Pichia pastoris CBS 7435]
Length = 345
Score = 39.1 bits (89), Expect = 0.85, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 10/72 (13%)
Query: 1 MTLRVVFMGTSEFA----VATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHK--- 53
M+LR+ +GT FA + LQ L + + +V Y + A K+ ++ V+
Sbjct: 1 MSLRIAVVGTGIFATDTHLPALQKL-DNIYQVVGCYNRTKAKAETFAKKAGITKVYDSLD 59
Query: 54 --KAQEFSLPAL 63
A + S+ +
Sbjct: 60 ELLADKDSIDVI 71
>gi|320100707|ref|YP_004176299.1| carbamoyl-phosphate synthase L chain ATP-binding protein
[Desulfurococcus mucosus DSM 2162]
gi|319753059|gb|ADV64817.1| Carbamoyl-phosphate synthase L chain ATP-binding protein
[Desulfurococcus mucosus DSM 2162]
Length = 502
Score = 39.1 bits (89), Expect = 0.85, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 9/86 (10%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVH-------- 52
M R++ G E AV + LV + + +YT+ + R + V
Sbjct: 1 MPRRIMVAGRGEAAVRIARTLVEKGYHPLGIYTEKDEASPHRRYMLEEAKVSSYMDVKEI 60
Query: 53 -KKAQEFSLPALVPTKLGQEEYEQFL 77
+ A E A+ P E +F
Sbjct: 61 VEAALELGAEAVHPCYGFLENNPEFH 86
>gi|207094096|ref|ZP_03241883.1| hypothetical protein HpylHP_15260 [Helicobacter pylori
HPKX_438_AG0C1]
Length = 34
Score = 39.1 bits (89), Expect = 0.88, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 37 RPAGRRGLKSVLSAVHKKAQEFSLPALVP 65
RP G RG K + V +KA E ++P P
Sbjct: 1 RPKG-RGHKMQYTPVKEKALELNIPVYQP 28
>gi|256423341|ref|YP_003123994.1| NmrA family protein [Chitinophaga pinensis DSM 2588]
gi|256038249|gb|ACU61793.1| NmrA family protein [Chitinophaga pinensis DSM 2588]
Length = 295
Score = 39.1 bits (89), Expect = 0.90, Method: Composition-based stats.
Identities = 5/38 (13%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 3 LRVVFMGT-SEFAVATLQALVSSSHSIVSVYTQPPRPA 39
++++ G+ A ++ L+ + H + + + P + +
Sbjct: 1 MKIITTGSLGNVATPVVKQLIEAGHDVTVITSNPDKKS 38
>gi|319898867|ref|YP_004158960.1| phosphoribosylglycinamide formyltransferase [Bartonella
clarridgeiae 73]
gi|319402831|emb|CBI76382.1| phosphoribosylglycinamide formyltransferase [Bartonella
clarridgeiae 73]
Length = 203
Score = 39.1 bits (89), Expect = 0.94, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 60/164 (36%), Gaps = 7/164 (4%)
Query: 1 MTLRVVFM--GTSEFAVATLQALVSSSH--SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQ 56
M +++ G + ++A + IV+V P AG + + +H +
Sbjct: 1 MKKQIIVFISGNGSNMASLIKASQQKEYPAKIVAVICDNPHAAGIKKARDNNVPIHIVDR 60
Query: 57 EFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
+ + + D+ Y +I + + N H SLLP +
Sbjct: 61 KN---YSTKKTHEEAILTILSQYQPDLICFAGYMRLISSYFIKLYEQRILNIHPSLLPLF 117
Query: 117 RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSN 160
+G ++A+ AG TG + + + +D G + VPI N
Sbjct: 118 KGLNTHEKALEAGVKITGCTVHLVTEEMDAGKILAQAAVPIHPN 161
>gi|93102415|ref|NP_034386.2| trifunctional purine biosynthetic protein adenosine-3 [Mus
musculus]
gi|47125526|gb|AAH70465.1| Phosphoribosylglycinamide formyltransferase [Mus musculus]
gi|74214286|dbj|BAE40386.1| unnamed protein product [Mus musculus]
gi|74219971|dbj|BAE40565.1| unnamed protein product [Mus musculus]
gi|74222965|dbj|BAE40629.1| unnamed protein product [Mus musculus]
gi|74223087|dbj|BAE40683.1| unnamed protein product [Mus musculus]
gi|74223110|dbj|BAE40694.1| unnamed protein product [Mus musculus]
gi|148671872|gb|EDL03819.1| phosphoribosylglycinamide formyltransferase, isoform CRA_a [Mus
musculus]
Length = 1010
Score = 39.1 bits (89), Expect = 0.94, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 60/169 (35%), Gaps = 31/169 (18%)
Query: 4 RVVFM--GTSEFAVATLQALVSSSHS------IVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
RV + GT LQAL+ S+ IV V + AG +A
Sbjct: 809 RVAVLISGTGS----NLQALIDSTRDPKSSSHIVLVISNKAAVAGL-----------DRA 853
Query: 56 QEFSLPALVPTKLGQEEY--------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYN 107
+ +P V + F+ D+ + + ++ + N
Sbjct: 854 ERAGIPTRVINHKLYKNRVEFDNAVDHVLEEFSVDIVCLAGFMRILSGPFVRKWDGKMLN 913
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
H SLLP ++G+ ++ + AG TG + + + +D G + VP
Sbjct: 914 IHPSLLPSFKGSNAHEQVLEAGVTITGCTVHFVAEDVDAGQIILQEAVP 962
>gi|74226928|dbj|BAE27107.1| unnamed protein product [Mus musculus]
Length = 1010
Score = 39.1 bits (89), Expect = 0.94, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 60/169 (35%), Gaps = 31/169 (18%)
Query: 4 RVVFM--GTSEFAVATLQALVSSSHS------IVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
RV + GT LQAL+ S+ IV V + AG +A
Sbjct: 809 RVAVLISGTGS----NLQALIDSTRDPKSSSHIVLVISNKAAVAGL-----------DRA 853
Query: 56 QEFSLPALVPTKLGQEEY--------EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYN 107
+ +P V + F+ D+ + + ++ + N
Sbjct: 854 ERAGIPTRVINHKLYKNRVEFDNAVDHVLEEFSVDIVCLAGFMRILSGPFVRKWDGKMLN 913
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
H SLLP ++G+ ++ + AG TG + + + +D G + VP
Sbjct: 914 IHPSLLPSFKGSNAHEQVLEAGVTITGCTVHFVAEDVDAGQIILQEAVP 962
>gi|332666812|ref|YP_004449600.1| beta-galactosidase [Haliscomenobacter hydrossis DSM 1100]
gi|332335626|gb|AEE52727.1| Beta-galactosidase., Arabinogalactan endo-1,4-beta-galactosidase
[Haliscomenobacter hydrossis DSM 1100]
Length = 1135
Score = 39.1 bits (89), Expect = 0.94, Method: Composition-based stats.
Identities = 28/267 (10%), Positives = 57/267 (21%), Gaps = 22/267 (8%)
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNG--HASLLPRWR 117
+P + + G + R + P W
Sbjct: 484 IPVRSFNYRQYAVADYHAEHPNQPIIGTEMGSTVSTRGQYSKDSIRAYLPDQDIHAPWWA 543
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
A + A + + P + S ++ +
Sbjct: 544 SRAEEWWMLAAESDFWLGGFIWTGFDYRGEPTPYQWPNISSHFGVMDMCGFPKNLYYYYQ 603
Query: 178 MVEA-----MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
N Q + + + + H
Sbjct: 604 SWWTDKDVLHISPHWNWRDKRGQPIDVWVNSNADDVELFLNGKSLGKQEMKRHGHLQWTV 663
Query: 233 PGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI----NPNFTIACSQG----AVRIMRL 284
++ + KL + VE G P EV+ + G + + +
Sbjct: 664 NYEPGKLEAIAYKKGKKL--TAKVETTGTPTEVVLTPYKTTML---ADGQDVSVINVTVV 718
Query: 285 QRAGGRVLDIGDFLLGCPVI-IGCIVG 310
R G V D + + + G I+G
Sbjct: 719 DREGREVPDADNLIR-FAIEGEGKIIG 744
>gi|197927388|ref|NP_001011899.2| trifunctional purine biosynthetic protein adenosine-3 [Rattus
norvegicus]
gi|149059850|gb|EDM10733.1| phosphoribosylglycinamide formyltransferase, isoform CRA_a [Rattus
norvegicus]
Length = 1010
Score = 39.1 bits (89), Expect = 0.96, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 60/171 (35%), Gaps = 31/171 (18%)
Query: 4 RVVFM--GTSEFAVATLQALVSSSHS------IVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
RV + GT LQAL+ S+ IV V + AG +A
Sbjct: 809 RVAVLISGTGS----NLQALIDSTRDPKSSSHIVLVISNKAAVAGL-----------DRA 853
Query: 56 QEFSLPALVPTK--------LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYN 107
+ +P V F+ D+ + + ++ + N
Sbjct: 854 ERAGIPTRVINHKLYKSRVEFDNAVDHVLEEFSVDIVCLAGFMRILSGPFVRKWDGKMLN 913
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPIS 158
H SLLP ++G+ ++ + AG TG + + + +D G + VP+
Sbjct: 914 IHPSLLPSFKGSNAHEQVLEAGVTITGCTVHFVAEDVDAGQIILQEAVPVQ 964
>gi|221101981|ref|XP_002169603.1| PREDICTED: similar to ALdehyde deHydrogenase family member (alh-3)
[Hydra magnipapillata]
Length = 558
Score = 39.1 bits (89), Expect = 0.97, Method: Composition-based stats.
Identities = 27/271 (9%), Positives = 72/271 (26%), Gaps = 19/271 (7%)
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
++ V +++ ++ ++ + R + + H +
Sbjct: 29 EKHGHRLKVFEINKEDDMLKYSKDYNHDLIICPFLTKCVPREVWSKTKPCLIVHPGIQGD 88
Query: 116 WRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCA 175
+ + + + +N+N+ S
Sbjct: 89 RGMNSLDWAIKENKLQWGVTVLQAAENMDAGNIWSTTNFSINRNNMNSLTKSSLYSNEIT 148
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHN---------HI 226
+A V ++ + N + P + + +N + +
Sbjct: 149 NASVVSVLQAVSNFIDQVPSKPLDYSDPNTKGVLKRNMNNQDREIDWKCSAEEISSIIRM 208
Query: 227 RALSPFPGAWLEMMIGNKHERIKLLESQLVEGE------GKPGEVI---NPNFTIACSQG 277
P A L + N + ++ S + + + PG+++ N + C G
Sbjct: 209 SDSQPGAIAVLSVPSCNYSSKFRVFGSVIEKEQLFSFDKNAPGDIVGQRNGAILVKCKNG 268
Query: 278 AVRIMRLQRAGGRVLDIGDFLLGCPVIIGCI 308
+ + L+ L +L IG I
Sbjct: 269 YIWLSHLK-NNKLKLPAIYWLQQAKNSIGYI 298
>gi|164656030|ref|XP_001729143.1| hypothetical protein MGL_3610 [Malassezia globosa CBS 7966]
gi|159103033|gb|EDP41929.1| hypothetical protein MGL_3610 [Malassezia globosa CBS 7966]
Length = 390
Score = 38.7 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 12/121 (9%), Positives = 28/121 (23%), Gaps = 3/121 (2%)
Query: 20 ALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSF 79
AL++ S +V P R RG+ S + V +A + + +
Sbjct: 88 ALINHSCDPNAVIVFPDR---VRGMPSKMHLVAIRAISAGEEVRISYVDVASCQAERQAT 144
Query: 80 NADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMK 139
+ + + ++ + E +
Sbjct: 145 LLERYCFACECRLCKRMGWRDPRMALWCPQPKCTGWVVFQNAASSWTACTQCEQVPNYVD 204
Query: 140 M 140
Sbjct: 205 T 205
>gi|403493|gb|AAA19013.1| glycinamide ribonucleotide synthetase [Mus musculus]
Length = 1010
Score = 38.7 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 31/169 (18%)
Query: 4 RVVFM--GTSEFAVATLQALVSSSHS------IVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
RV + GT LQAL+ S+ IV V + AG +A
Sbjct: 809 RVAVLISGTGS----NLQALIDSTRDPKSSSHIVLVISNKAAVAGL-----------DRA 853
Query: 56 QEFSLPALVPTK--------LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYN 107
+ +P V F+ D+ + + ++ + N
Sbjct: 854 ERAGIPTRVINHKLSKNRVEFDNAVDHVLEEFSVDIVCLAGFMRILSGPFVRKWDGKMLN 913
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
H SLLP ++G+ ++ + AG TG + + + +D G + VP
Sbjct: 914 IHPSLLPSFKGSNAHEQVLEAGVTITGCTVHFVAEDVDAGQIILQEAVP 962
>gi|691792|gb|AAC53251.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
synthetase-glycinamide ribonucleotide formyltransferase
[Mus musculus]
Length = 1010
Score = 38.7 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 31/169 (18%)
Query: 4 RVVFM--GTSEFAVATLQALVSSSHS------IVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
RV + GT LQAL+ S+ IV V + AG +A
Sbjct: 809 RVAVLISGTGS----NLQALIDSTRDPKSSSHIVLVISNKAAVAGL-----------DRA 853
Query: 56 QEFSLPALVPTK--------LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYN 107
+ +P V F+ D+ + + ++ + N
Sbjct: 854 ERAGIPTRVINHKLSKNRVEFDNAVDHVLEEFSVDIVCLAGFMRILSGPFVRKWDGKMLN 913
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
H SLLP ++G+ ++ + AG TG + + + +D G + VP
Sbjct: 914 IHPSLLPSFKGSNAHEQVLEAGVTITGCTVHFVAEDVDAGQIILQEAVP 962
>gi|50403785|sp|Q64737|PUR2_MOUSE RecName: Full=Trifunctional purine biosynthetic protein
adenosine-3; Includes: RecName:
Full=Phosphoribosylamine--glycine ligase; AltName:
Full=Glycinamide ribonucleotide synthetase; Short=GARS;
AltName: Full=Phosphoribosylglycinamide synthetase;
Includes: RecName:
Full=Phosphoribosylformylglycinamidine cyclo-ligase;
AltName: Full=AIR synthase; Short=AIRS; AltName:
Full=Phosphoribosyl-aminoimidazole synthetase; Includes:
RecName: Full=Phosphoribosylglycinamide
formyltransferase; AltName:
Full=5'-phosphoribosylglycinamide transformylase;
AltName: Full=GAR transformylase; Short=GART
Length = 1010
Score = 38.7 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 31/169 (18%)
Query: 4 RVVFM--GTSEFAVATLQALVSSSHS------IVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
RV + GT LQAL+ S+ IV V + AG +A
Sbjct: 809 RVAVLISGTGS----NLQALIDSTRDPKSSSHIVLVISNKAAVAGL-----------DRA 853
Query: 56 QEFSLPALVPTK--------LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYN 107
+ +P V F+ D+ + + ++ + N
Sbjct: 854 ERAGIPTRVINHKLSKNRVEFDNAVDHVLEEFSVDIVCLAGFMRILSGPFVRKWDGKMLN 913
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
H SLLP ++G+ ++ + AG TG + + + +D G + VP
Sbjct: 914 IHPSLLPSFKGSNAHEQVLEAGVTITGCTVHFVAEDVDAGQIILQEAVP 962
>gi|170782481|ref|YP_001710814.1| hypothetical protein CMS_2127 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157050|emb|CAQ02223.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length = 337
Score = 38.7 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 3 LRVVFMG-TSEFAVATLQALVSSSHSIVSV 31
+RVV +G T L+ L ++ IV V
Sbjct: 1 MRVVVIGATGNLGTGVLRRLHAAGAEIVGV 30
>gi|148272448|ref|YP_001222009.1| putative NAD-dependent epimerase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147830378|emb|CAN01313.1| putative NAD-dependant epimerase [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 337
Score = 38.7 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 3 LRVVFMG-TSEFAVATLQALVSSSHSIVSV 31
+RVV +G T L+ L ++ IV V
Sbjct: 1 MRVVVIGATGNLGTGVLRRLHAAGAEIVGV 30
>gi|229918116|ref|YP_002886762.1| hypothetical protein EAT1b_2396 [Exiguobacterium sp. AT1b]
gi|229469545|gb|ACQ71317.1| domain of unknown function DUF1731 [Exiguobacterium sp. AT1b]
Length = 302
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 3 LRVVFMG-TSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRG 43
+++ G T ++AL + H +V V T+ PRP RG
Sbjct: 1 MKIAITGGTGLIGQPLVRALADAGHQVV-VLTRHPRPR-HRG 40
>gi|332162587|ref|YP_004299164.1| phosphoribosylglycinamide formyltransferase [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325666817|gb|ADZ43461.1| phosphoribosylglycinamide formyltransferase [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 231
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS------SHSIVSVYTQPPRPAGRRGLKSVLSAVHKK 54
M ++V + + + + LQAL+ + S I +V++ P G K A H
Sbjct: 20 MK-KIVVLVSGQGS--NLQALIDAQQQGRISGEISAVFSNNPDAYGLERAKLAGIAHHAL 76
Query: 55 AQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
+ + + D+ V+ Y ++ + N H SLLP
Sbjct: 77 DDKA---YADRASFDLALAQAIDQYQPDLLVLAGYMRILSPEFVQHYAGRMLNIHPSLLP 133
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPIS 158
++ G ++A+ GD E G ++ + + LD GPV KVPI
Sbjct: 134 KYPGLHTHRQALENGDQEHGTSVHFVTEELDGGPVILQAKVPIF 177
>gi|318606687|emb|CBY28185.1| phosphoribosylglycinamide formyltransferase [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 212
Score = 38.7 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSS------SHSIVSVYTQPPRPAGRRGLKSVLSAVHKK 54
M ++V + + + + LQAL+ + S I +V++ P G K A H
Sbjct: 1 MK-KIVVLVSGQGS--NLQALIDAQQQGRISGEISAVFSNNPDAYGLERAKLAGIAHHAL 57
Query: 55 AQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
+ + + D+ V+ Y ++ + N H SLLP
Sbjct: 58 DDKA---YADRASFDLALAQAIDQYQPDLLVLAGYMRILSPEFVQHYAGRMLNIHPSLLP 114
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPIS 158
++ G ++A+ GD E G ++ + + LD GPV KVPI
Sbjct: 115 KYPGLHTHRQALENGDQEHGTSVHFVTEELDGGPVILQAKVPIF 158
>gi|307209224|gb|EFN86331.1| Trifunctional purine biosynthetic protein adenosine-3 [Harpegnathos
saltator]
Length = 1008
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 59/155 (38%), Gaps = 27/155 (17%)
Query: 18 LQALVSS--------SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLG 69
LQ+L+ + IV V + P G GLK +A+ + +V
Sbjct: 819 LQSLIDATQDPSQHIGAEIVLVISNKP---GVEGLK--------RAERAGIKTVVIKHTN 867
Query: 70 QEEYEQFLSFNA--------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
E F S ++ + + ++ ++ + K N H SLLP ++GA
Sbjct: 868 YPNRETFDSAMNVELHAAGVEIVCLAGFMRILSEQFVKHWKGALLNIHPSLLPSFKGANA 927
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
+ + A +G + ++ +D+G + VP
Sbjct: 928 HKDVLAARVRVSGCTVHFVEVDIDSGAIVEQEAVP 962
>gi|71066180|ref|YP_264907.1| phosphoribosylglycinamide formyltransferase [Psychrobacter arcticus
273-4]
gi|71039165|gb|AAZ19473.1| phosphoribosylglycinamide formyltransferase [Psychrobacter arcticus
273-4]
Length = 240
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 14/156 (8%)
Query: 2 TLRVVFM--GTSEFAVATLQALVSS------SHSIVSVYTQ-PPRPAGRRGLKSVLSAVH 52
LR+ + G+ LQ L+++ IV V + A R K V
Sbjct: 23 PLRIAVLVSGSGS----NLQVLINAMQAGALPIEIVGVISNREDAYAITR-AKDADIPVA 77
Query: 53 KKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
+ S + Q ++ D+ V+ + V+ +++ + N H SL
Sbjct: 78 ALSHVASGKRMGIKTFETHASAQLTAWQPDLIVLAGFMRVLSGTFIDSMPVPMINLHPSL 137
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGP 148
LP ++G QR I AG+ G +I + LD G
Sbjct: 138 LPCYKGLDTHQRVIQAGERHHGCSIHVVTAELDAGQ 173
>gi|288917086|ref|ZP_06411456.1| Phosphoglycerate kinase [Frankia sp. EUN1f]
gi|288351455|gb|EFC85662.1| Phosphoglycerate kinase [Frankia sp. EUN1f]
Length = 400
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 14 AVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHK-KAQEFSLPA 62
+V T+QAL+ +V V + RP G K L+ V + A+ +P
Sbjct: 42 SVPTIQALLDRQAKVV-VCSHLGRPKGEPEAKYSLAPVAERLAELLGVPV 90
>gi|256086471|ref|XP_002579422.1| methionyl-tRNA formyltransferase [Schistosoma mansoni]
gi|238664856|emb|CAZ35661.1| methionyl-tRNA formyltransferase, putative [Schistosoma mansoni]
Length = 505
Score = 38.7 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 16/67 (23%)
Query: 5 VVFMGTSEFAVATLQAL--VSSSH---SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
VVF G+ +++ L+AL S H ++ V T + + V +
Sbjct: 14 VVFFGSDYYSLPHLRALEEHQSQHKDIQLLFVVTTSDK-----------TPVGYHCIQNK 62
Query: 60 LPALVPT 66
+ ++
Sbjct: 63 IDHVIWP 69
>gi|39945508|ref|XP_362291.1| hypothetical protein MGG_04736 [Magnaporthe oryzae 70-15]
gi|145011245|gb|EDJ95901.1| hypothetical protein MGG_04736 [Magnaporthe oryzae 70-15]
Length = 303
Score = 38.7 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 28/258 (10%), Positives = 60/258 (23%), Gaps = 32/258 (12%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++V G F L+ + H IV + T+ +P + K ++++P+
Sbjct: 1 MKVAIAGIGNFGPYLLEEIPKEGHEIV-ILTRSQKPHIKLPQKVT---------DYTIPS 50
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
L + + D V + ++ L+ H + PI
Sbjct: 51 LESALQDVDAVVSAI-PAHDPGYVKTHLALLEACRLSPRCKNLIISHWAENIDDVTDHPI 109
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
+ A+ + A ++ A
Sbjct: 110 FPHGDNTVHHLTAALRAQTEVA---------------------WTAVCCGWLADYVLPAS 148
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIG 242
+ Q + + P + G
Sbjct: 149 QRHLGEIGAFWLQDRPQKVFTVYGPGTQRVSFTPSRDVARAVARLLSRPGQWTPTTFVRG 208
Query: 243 NKHERIKLLESQLVEGEG 260
+ +L E + EG
Sbjct: 209 DTMTWNELWELVSAKEEG 226
>gi|222109313|ref|YP_002551577.1| d-amino-acid dehydrogenase [Acidovorax ebreus TPSY]
gi|221728757|gb|ACM31577.1| D-amino-acid dehydrogenase [Acidovorax ebreus TPSY]
Length = 446
Score = 38.7 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 23/276 (8%), Positives = 63/276 (22%), Gaps = 13/276 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + +G ++T L H + V QP A +
Sbjct: 1 MKTIVLGAGIIGISTAWHLRERGHEVTVVDRQPDAALET-----------SFANAAQISV 49
Query: 63 -LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+E + L + D + + + + + R
Sbjct: 50 SYCEPWANREAPWKALKWMFDKEAPLLFRPQLDWEQWRWCLKFLAQCNDTAFARNVQQIV 109
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
A + + ++ H +A S + ++ +V
Sbjct: 110 ALGAYSHAALKDIVRATGIEYHRLERGIAHFYTDQKSFDDAAHAVELMRRFGVQRRVVSR 169
Query: 182 MDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMI 241
+ L + + F ++ + L +
Sbjct: 170 DELLAIEPAFHAYGDRITGGTYTSTDESGDARVFTQALARRCAERGVQFLYGHDVLRLNR 229
Query: 242 GNKHERIKLLESQLVEGEGKPGEVIN-PNFTIACSQ 276
+ ++ G+ +++ +AC
Sbjct: 230 SGDAIESIAIRARQESATGQKDQILKADAVVVACGS 265
>gi|27379787|ref|NP_771316.1| hypothetical protein blr4676 [Bradyrhizobium japonicum USDA 110]
gi|27352940|dbj|BAC49941.1| blr4676 [Bradyrhizobium japonicum USDA 110]
Length = 195
Score = 38.7 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 12/153 (7%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
+R+ +G+ F V TL L S SI V A R + A+ +
Sbjct: 1 MRITLVGSRHFGVTTLNMLREHSVSIARVVV---ADAEDR--------LAATARAAGIEV 49
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+V + + + D+ + I + L A + G H SLLPR RG A +
Sbjct: 50 VVQANPKLVVASEI-APDTDLIITAHSHARIGKDALAAARFGGIGYHPSLLPRHRGKAAV 108
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKV 155
+ I GD G I + +D G +A
Sbjct: 109 EWTIKEGDPIAGGTIYHLADRMDAGAIAAQDWC 141
>gi|294139997|ref|YP_003555975.1| formyltetrahydrofolate deformylase [Shewanella violacea DSS12]
gi|293326466|dbj|BAJ01197.1| formyltetrahydrofolate deformylase [Shewanella violacea DSS12]
Length = 277
Score = 38.7 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 55/171 (32%), Gaps = 28/171 (16%)
Query: 2 TLRVVFMGTSEFAVATL-QALVSSSH-----SIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
R+V M T E L L+ + + I + G L A
Sbjct: 81 KKRIVIMVTKE--AHCLGDILMKAYYGGLDVEIAGII----------GNYETLKP---LA 125
Query: 56 QEFSLPALVPTKLGQEEYEQ-------FLSFNADVAVVVAYGLVIPQRILNATKLGFYNG 108
+F++P + + D V+ + ++ + N
Sbjct: 126 DKFNIPFHFIPHQDITRLDHEAIINDLIEKYAPDYVVLAKFMRILTPEFVERYPNRIINI 185
Query: 109 HASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISS 159
H S LP + GA+P ++A G G ++ LD GP+ +P+
Sbjct: 186 HHSFLPAFIGASPYRQAWERGVKIIGATAHFVNNCLDEGPIIKQDVIPVDH 236
>gi|260549982|ref|ZP_05824197.1| NADP oxidoreductase coenzyme F420-dependent family protein
[Acinetobacter sp. RUH2624]
gi|260406974|gb|EEX00452.1| NADP oxidoreductase coenzyme F420-dependent family protein
[Acinetobacter sp. RUH2624]
Length = 259
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVY 32
+++ +G+ FA +AL++ H+I VY
Sbjct: 1 MKISLLGSGRFAFHLAKALLAKGHNIAQVY 30
>gi|114799044|ref|YP_759907.1| ATP-dependent AMP-binding enzyme family protein [Hyphomonas
neptunium ATCC 15444]
gi|114739218|gb|ABI77343.1| ATP-dependent AMP-binding enzyme family protein [Hyphomonas
neptunium ATCC 15444]
Length = 1516
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 50/309 (16%), Positives = 92/309 (29%), Gaps = 29/309 (9%)
Query: 9 GTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKL 68
G + L+A ++S + +V TQ SA+ + L
Sbjct: 10 GDGPLLLQCLEAYMASGGQVTAVVTQ-------------DSAIASHGDAIGVRVL---NK 53
Query: 69 GQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMA 128
+ + D + +A ++P+ +L + N H LPR+ G AI+
Sbjct: 54 SSVVSGELEALEFDYLLSIANLDMLPESLLKRARKMAINFHDGPLPRYAGLNATSWAILQ 113
Query: 129 GDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQN 188
G+ G+ +M D G + + I N L + + + L
Sbjct: 114 GETAHGVTWHEMTGKADMGGIVEAAPLTIDPNDTAFSLNAKCFEAGLASFKAMIPSLLAG 173
Query: 189 NLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERI 248
N+ + PQ + + + + F +
Sbjct: 174 NVTVRPQDGARTYFGRYKRPDAAATLRFDVSADDTLALSRAMTFGPYTNTLSFLKVWTGQ 233
Query: 249 KLLESQLVEGEGKP------GEVI---NPNFTIACSQG-AVRIMRLQRAGGRVLDIG--- 295
++L VE G VI +A G +R+ L + G +D
Sbjct: 234 RVLLVSDVEAATGAASLAAHGTVIAHDADGVVVAAQGGQLLRLSGLTDSSGAAVDPAQSG 293
Query: 296 DFLLGCPVI 304
D LG +
Sbjct: 294 DLALGARLP 302
>gi|46849491|dbj|BAD17955.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
synthetase-glycinamide ribonucleotide transformylase
[Branchiostoma belcheri]
Length = 1002
Score = 38.3 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 62/155 (40%), Gaps = 27/155 (17%)
Query: 18 LQALVSSS--------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLG 69
LQAL+ S IV V + P G +GL ++A++ +P V + G
Sbjct: 811 LQALIDHSTDPKNNSAAEIVLVISNIP---GVKGL--------ERAEKAGIPTKVISHKG 859
Query: 70 QEEYEQFLSFNA--------DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ E+F ++ + + ++ + N H SLLP ++G
Sbjct: 860 YKKREEFDKKVHEALVEAGVEMICLAGFMRILSGWFVQQWTGNLLNIHPSLLPSFKGMNA 919
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
+ A+ AG +G + + + +D G + VP
Sbjct: 920 HKLALEAGVRVSGCTVHFVVEEVDAGAIVAQEAVP 954
>gi|119469062|ref|ZP_01612046.1| Methionyl-tRNA formyltransferase-like protein [Alteromonadales
bacterium TW-7]
gi|119447314|gb|EAW28582.1| Methionyl-tRNA formyltransferase-like protein [Alteromonadales
bacterium TW-7]
Length = 294
Score = 38.3 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 34/293 (11%), Positives = 93/293 (31%), Gaps = 31/293 (10%)
Query: 3 LRVVF--MGTSEFAVATLQALVSSSH---SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
++ F +G L+A++ S + ++V + K + +
Sbjct: 1 MKFAFNLLGAK--GYHCLKAILESDFCKLNNLTVIIGTDKSVTDDFSKK----IKVLCEN 54
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
++ + + + + D + + +I H S+LP++R
Sbjct: 55 KNINSYCRNEFQDYK-------DYDYVFAIGWRWLIKGVQ----DNKLIIFHDSILPKYR 103
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
G AP+ A + + + G+ + D G + + + + I L +++
Sbjct: 104 GFAPLVNAALNKEKKIGVTALFGAHEYDKGALIAQKSIKVVYPIRIGNLIEKIIPCYVDL 163
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ E + KL + G E + + ++ +
Sbjct: 164 VDEVLKKLVVGKEITALNQIEGDASYSIWLDSEDYFL--DWSCDSDYIANKINLLGSPYE 221
Query: 238 EMMIGNKHERIKLLESQLVE----GEGKPGEVI---NPNFTIACSQGAVRIMR 283
++ + + +++ + G+V+ + I C +G ++I
Sbjct: 222 FAKSYMNNQEVIICAAEVYKDLTLEHRHVGKVLIVEDGCPVIICGRGLIKITE 274
>gi|223985920|ref|ZP_03635956.1| hypothetical protein HOLDEFILI_03262 [Holdemania filiformis DSM
12042]
gi|223962107|gb|EEF66583.1| hypothetical protein HOLDEFILI_03262 [Holdemania filiformis DSM
12042]
Length = 188
Score = 38.3 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 32/177 (18%)
Query: 1 MTLRVVFM--GTSEFAVATLQALVSS------SHSIVSVYTQPPRPAGRRGLKSVLSAVH 52
M R+ GT +A+ + + I V +P + V
Sbjct: 1 MK-RIAVFASGTGT----NFEAIADAIEAGQLNAEITLVV--VDKPG---------APVI 44
Query: 53 KKAQEFSLPALVPTKLGQEEYE--------QFLSFNADVAVVVAYGLVIPQRILNATKLG 104
+KAQ+ + + + + + Y ++ +L A
Sbjct: 45 EKAQKRGIDVFAFNPKDYPSKPDYEREIIARCQAHGVEWIALAGYMRLLSPVMLEAYDQR 104
Query: 105 FYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNI 161
N H SLLP ++G I +AI G G+ I +D +D G + R +
Sbjct: 105 IVNIHPSLLPAFKGKDAIGQAIEYGVKVMGVTIHYVDASMDGGRIIAQRAFAVQPQW 161
>gi|326784531|ref|YP_004324978.1| PRGA-formyltransferase [Prochlorococcus phage P-SSM7]
gi|310004564|gb|ADO98956.1| PRGA-formyltransferase [Prochlorococcus phage P-SSM7]
Length = 191
Score = 38.3 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 22 VSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNA 81
+S+ H +V + K +AV +A +F +P + ++ + + A
Sbjct: 22 LSNKHEVVLMI----------HNKEKCNAVK-RAAKFGIPHIHIPHKNEDLMIRTIRAFA 70
Query: 82 DVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMD 141
+V+A + I + N H SLLP+++GA I++A+ +GD ETG+ + +
Sbjct: 71 PDLIVLAGYMRILSPRFVGSFENIINVHPSLLPKFKGAHAIEQALESGDTETGVTVHYVT 130
Query: 142 KHLDTGPVAFMRKVP 156
+ LD+G V KVP
Sbjct: 131 EELDSGEVILQTKVP 145
>gi|269837180|ref|YP_003319408.1| formyl transferase domain-containing protein [Sphaerobacter
thermophilus DSM 20745]
gi|269786443|gb|ACZ38586.1| formyl transferase domain protein [Sphaerobacter thermophilus DSM
20745]
Length = 230
Score = 38.3 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 75/204 (36%), Gaps = 10/204 (4%)
Query: 5 VVFMGTSEFAVATLQALVSS-SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
V+ +G A+ S + + V P P ++ A E +P +
Sbjct: 11 VIVLGKGTLAIRIADWFHRSPDYHLTQVVPVVPEP-------IWTDSLTAWAHEHGVPVV 63
Query: 64 VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
E S+ D+A+ V YG +I A +N H LPR+RG +PI
Sbjct: 64 SSGHYRDIEGVHDASWRVDLAMSVFYGHIIRPW-FIAKCERIWNLHNGPLPRYRGVSPIN 122
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
A+ G+ + G+ I ++ +D GP+ + I + ++ + +
Sbjct: 123 WALKNGEQKHGVTIHEITPGIDDGPIIAQVEYSIYPEFDEVQDVYARALEYGWTLFQQT- 181
Query: 184 KLEQNNLPLSPQIENGITYAEKIS 207
+ + PQ E+ TY +
Sbjct: 182 MPLADRITPRPQDESLATYYSREH 205
>gi|298345237|ref|YP_003717924.1| phosphoribosylglycinamide formyltransferase [Mobiluncus curtisii
ATCC 43063]
gi|298235298|gb|ADI66430.1| phosphoribosylglycinamide formyltransferase [Mobiluncus curtisii
ATCC 43063]
Length = 214
Score = 38.3 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 55/155 (35%), Gaps = 25/155 (16%)
Query: 18 LQALVSS------SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQE 71
LQAL ++ IV V + G R AQ +P
Sbjct: 27 LQALYTATTNAAYGAEIVGVVSDRDTAEGLR-----------WAQSRGIPTATVCLGDFP 75
Query: 72 EYEQF--------LSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+ E + S+ D+ V + ++ + L N H SLLP + G +
Sbjct: 76 DRESWDVAFTAAVQSWEPDLIVSAGFLKILGPKFLAQWPSRVVNTHNSLLPSFVGIHGPR 135
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPIS 158
A+ AG G + +D +DTGP+ VP+
Sbjct: 136 DALRAGVKLAGATLFIVDPGMDTGPILAQVAVPVH 170
>gi|25027492|ref|NP_737546.1| phosphoribosylglycinamide formyltransferase [Corynebacterium
efficiens YS-314]
gi|259507101|ref|ZP_05750001.1| phosphoribosylglycinamide formyltransferase [Corynebacterium
efficiens YS-314]
gi|23492774|dbj|BAC17746.1| 5'-phosphoribosylglycinamide formyltransferase [Corynebacterium
efficiens YS-314]
gi|259165379|gb|EEW49933.1| phosphoribosylglycinamide formyltransferase [Corynebacterium
efficiens YS-314]
Length = 211
Score = 38.3 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 26/162 (16%)
Query: 5 VVFM--GTSEFAVATLQALVSS--SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+V + GT LQAL+ + ++ I V + PA +R A + +
Sbjct: 22 IVVLASGTGTL----LQALIEAQGNYRIAGVVSDVDCPAIQR------------ATDAGI 65
Query: 61 PAL------VPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLP 114
PA E + ++ D+ V + ++ + L+ N H +LLP
Sbjct: 66 PARVVKLGADRAAWNAELADAVAAYKPDLVVSAGFMKILGEGFLSRFPSRIINTHPALLP 125
Query: 115 RWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
+ GA ++ A+ G TG + +D +DTGP+ R VP
Sbjct: 126 SFPGAHAVRDALAYGVKITGSTVHLVDAGVDTGPIIDQRPVP 167
>gi|322795994|gb|EFZ18618.1| hypothetical protein SINV_04853 [Solenopsis invicta]
Length = 1014
Score = 38.3 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 59/158 (37%), Gaps = 27/158 (17%)
Query: 18 LQALVSS--------SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLG 69
LQ+L+++ IV V + P G GLK +A+ + +
Sbjct: 826 LQSLINATQDPSQHIGAEIVLVISNKP---GVEGLK--------RAERAGIKTVTIKHTD 874
Query: 70 QE--------EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+ + ++ + + ++ ++ + K N H SLLP ++GA
Sbjct: 875 YPSRESFDTAMNVELHAAGVEIVCLAGFMRILSEQFVKHWKGALLNIHPSLLPSFKGANA 934
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISS 159
+ + A +G + ++ +D+G + VP+
Sbjct: 935 HKDVLAARVRVSGCTVHFVEVDIDSGAIVEQEAVPVFP 972
>gi|156376522|ref|XP_001630409.1| predicted protein [Nematostella vectensis]
gi|156217429|gb|EDO38346.1| predicted protein [Nematostella vectensis]
Length = 1022
Score = 38.3 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 66/172 (38%), Gaps = 35/172 (20%)
Query: 3 LRVVFM----GTSEFAVATLQALVS------SSHSIVSVYTQPPRPAGRRGLKSVLSAVH 52
+RV + GT+ LQAL+ S IV V + P G +GLK
Sbjct: 822 MRVGVLISGSGTN------LQALIDRSLRHDSHADIVLVISNKP---GVQGLK------- 865
Query: 53 KKAQEFSLPALVPTKLGQEEYEQFLSFNA--------DVAVVVAYGLVIPQRILNATKLG 104
+AQ+ +P +V + F ++ + + ++ + +
Sbjct: 866 -RAQDAGIPTMVIKHKDFKNRVDFDMAVHAALEDAQVELVCLAGFMRILSGDFVRKWRGR 924
Query: 105 FYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
N H SLLP ++G Q+ + AG +G + + + +D G + VP
Sbjct: 925 LLNIHPSLLPSFKGIDAHQQVLAAGVCISGCTVHFVVEEVDAGAIITQEVVP 976
>gi|163732550|ref|ZP_02139995.1| Trk potassium uptake system protein [Roseobacter litoralis Och
149]
gi|161393910|gb|EDQ18234.1| Trk potassium uptake system protein [Roseobacter litoralis Och
149]
Length = 226
Score = 38.3 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSV 31
+R V +G S+F VAT + L+ H +V +
Sbjct: 10 AMRTVIVGGSKFGVATAEQLIDKGHEVVLI 39
>gi|269469050|gb|EEZ80611.1| ormyltetrahydrofolate hydrolase [uncultured SUP05 cluster
bacterium]
Length = 283
Score = 38.3 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 14/162 (8%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHS------IVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
R++ MG+ + + L+ H IV V + + + S ++
Sbjct: 88 RILIMGSK--SSHCVADLLHRHHEKELEGEIVGVLSNHDKLSKL------ASWYDVLFKQ 139
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
S+ T + +FN DV V+ Y +IP + + N H S LP +
Sbjct: 140 VSINDSTKTADIASMTQAISAFNPDVIVLARYMQIIPGDLCDKYSGKIINIHHSFLPSFV 199
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISS 159
GA P RA G G + +LD GP+ V +
Sbjct: 200 GANPYARAAERGVKLIGATCHYVTANLDEGPIIEQDVVRVDH 241
>gi|182678276|ref|YP_001832422.1| phosphoribosylglycinamide formyltransferase [Beijerinckia indica
subsp. indica ATCC 9039]
gi|182634159|gb|ACB94933.1| phosphoribosylglycinamide formyltransferase [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 211
Score = 37.9 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 51/146 (34%), Gaps = 9/146 (6%)
Query: 19 QALVSS------SHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEE 72
+AL+ S I V + P G R K + A + + + +
Sbjct: 2 RALIESARAPHFPAEIALVLSNRPDAEGLRFAKEKG--IATAAVDHKI-HAGREEFERSM 58
Query: 73 YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNE 132
D+ + + ++ + + N H +LLP +RG +RA+ G
Sbjct: 59 QVLLELHRIDLICLAGFMRLLTPWFIGQWEGRILNIHPALLPAYRGLHTHERALADGVKI 118
Query: 133 TGIAIMKMDKHLDTGPVAFMRKVPIS 158
G + + +D GP+ VP+
Sbjct: 119 HGCTVHFVVPAMDEGPIIAQAAVPVF 144
>gi|303235706|ref|ZP_07322313.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
gi|302484153|gb|EFL47141.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
Length = 269
Score = 37.9 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQ 34
+++V +G A AL ++H IV V+++
Sbjct: 11 MKIVLIGAGNLATNLGLALHEANHDIVQVFSR 42
>gi|311105548|ref|YP_003978401.1| D-amino acid dehydrogenase small subunit [Achromobacter
xylosoxidans A8]
gi|310760237|gb|ADP15686.1| D-amino acid dehydrogenase small subunit 2 [Achromobacter
xylosoxidans A8]
Length = 418
Score = 37.9 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAG----RRGLKSVLSAVHKKA 55
M++RV +G VA+ L H +V V +Q RPA G + S V A
Sbjct: 1 MSMRVCVIGAGVVGVASAYFLARQGHDVVLVDSQA-RPAEVSSYANGGQLSYSYVAPLA 58
>gi|121592506|ref|YP_984402.1| D-amino-acid dehydrogenase [Acidovorax sp. JS42]
gi|120604586|gb|ABM40326.1| D-amino-acid dehydrogenase [Acidovorax sp. JS42]
Length = 454
Score = 37.9 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 23/277 (8%), Positives = 63/277 (22%), Gaps = 13/277 (4%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
++ + +G ++T L H + V QP A +
Sbjct: 8 AMKTIVLGAGIIGISTAWHLRERGHEVTVVDRQPDAALET-----------SFANAAQIS 56
Query: 62 A-LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAA 120
+E + L + D + + + + + R
Sbjct: 57 VSYCEPWANREAPWKALKWMFDKEAPLLFRPQLDWEQWRWCLKFLAQCNDTAFARNVQQI 116
Query: 121 PIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVE 180
A + + ++ H +A S + ++ +V
Sbjct: 117 VALGAYSHAALKDIVRATGIEYHRLERGIAHFYTDQKSFDDAAHAVELMRRFGVQRRVVS 176
Query: 181 AMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMM 240
+ L + + F ++ + L +
Sbjct: 177 RDELLAIEPAFRAYGDRITGGTYTSTDESGDARVFTQALARRCAERGVQFLYGHDVLRLN 236
Query: 241 IGNKHERIKLLESQLVEGEGKPGEVIN-PNFTIACSQ 276
+ ++ G+ +++ +AC
Sbjct: 237 RSGDAIESIAIRARQESATGQKDQILKADAVVVACGS 273
>gi|30248118|ref|NP_840188.1| phosphoribosylglycinamide formyltransferase [Nitrosomonas europaea
ATCC 19718]
gi|30180003|emb|CAD83998.1| purN; phosphoribosylglycinamide formyltransferase protein
[Nitrosomonas europaea ATCC 19718]
Length = 210
Score = 37.9 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 63/177 (35%), Gaps = 19/177 (10%)
Query: 19 QALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLS 78
QA++ + + +V + P G AQ +P V + + F +
Sbjct: 16 QAILEAGLPVAAVISNNPAAEGL-----------MFAQTRGIPTQVIDHRTFPDRKAFDA 64
Query: 79 --------FNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGD 130
+ D+ V+ + ++ + ++ + N H SLLP + G RA+ G
Sbjct: 65 ALAETIDTYQPDLVVLAGFMRILSEAFVDHYQGRLVNIHPSLLPAFPGLDTHTRALQEGV 124
Query: 131 NETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQ 187
G + + LD GP+ +P+ ++ L + +A+ Q
Sbjct: 125 KIHGCTVHFVTSQLDHGPIIAQAAIPVLTDDTPTMLATRVLAQEHRIYPQAVRWFLQ 181
>gi|226364923|ref|YP_002782705.1| UDP-glucose 6-dehydrogenase [Rhodococcus opacus B4]
gi|226243412|dbj|BAH53760.1| UDP-glucose 6-dehydrogenase [Rhodococcus opacus B4]
Length = 441
Score = 37.9 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSV 31
MT+R+ GT + H ++ V
Sbjct: 1 MTMRIAVFGTGYLGATHAACMAELGHEVLGV 31
>gi|298251429|ref|ZP_06975232.1| formyl transferase domain protein [Ktedonobacter racemifer DSM
44963]
gi|297546021|gb|EFH79889.1| formyl transferase domain protein [Ktedonobacter racemifer DSM
44963]
Length = 327
Score = 37.9 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 63/305 (20%), Positives = 119/305 (39%), Gaps = 28/305 (9%)
Query: 4 RVVFMG-TSEFAVATLQALVSSSHSIVSVY--------------TQPPRPAGRRGL---- 44
RV+F G F+ L AL+ + + V T+ P R +
Sbjct: 23 RVLFFGMQGTFSALALSALLEAGIDVRGVVIPGGAIPGRATPAITRYENPLPARTMLPLA 82
Query: 45 -KSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLS-FNADVAVVVAYGLVIPQRILNATK 102
S+ + + + A + LP ++L L+ + D+ V + +IP RIL+ +
Sbjct: 83 HTSLHTNIVQIATKQHLPLWKVSRLNDPTTHAILADYEPDLVCVACFSRLIPARILDLPR 142
Query: 103 LGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNIN 162
LG N H SLLP RG P+ +ETGI I MD+ +D+GP+ ++ I ++
Sbjct: 143 LGCLNVHPSLLPANRGPEPLFWTFREHQHETGITIHLMDRGMDSGPIVLQERIEIPDGMS 202
Query: 163 TAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENV 222
L+ + + +A +L ++ ++ Q E +Y + + + +
Sbjct: 203 YELLETRCAERGGALLAQAAWQLYRDEAQIAEQDEALSSYHSFPAYEDLGIPVDQWDARE 262
Query: 223 HNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGE----VINPN--FTIACSQ 276
+ + + L + + + + +P E VI+ + C Q
Sbjct: 263 VYNFISGVGHWESPLHIEAPDSELETLEVRNCYS-YSLEPLEDKRRVIDEGGPLVVRCKQ 321
Query: 277 GAVRI 281
G VR+
Sbjct: 322 GWVRV 326
>gi|126325455|ref|XP_001376993.1| PREDICTED: similar to phosphoribosylglycinamide formyltransferase,
phosphoribosylglycinamide synthetase,
phosphoribosylaminoimidazole synthetase [Monodelphis
domestica]
Length = 1040
Score = 37.9 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 25/153 (16%)
Query: 18 LQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQE 71
LQ+L+ S+ IV V + AG +KA++ +P V +
Sbjct: 851 LQSLIDSTKEPTSFAQIVIVISNKDGVAGL-----------EKAEKAGIPTKVINHKLYK 899
Query: 72 EYEQFL--------SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+F F+ D+ + + ++ + N H SLLP ++G+ +
Sbjct: 900 SRTEFDSEIDKVLEEFSIDLICLAGFMRILSHPFVQKWNGKILNIHPSLLPSFKGSNAHE 959
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
+ + +G TG + + + +D G + VP
Sbjct: 960 QVLKSGVRITGCTVHFVAEEVDAGQIIAQEAVP 992
>gi|153011081|ref|YP_001372295.1| 2-hydroxy-3-oxopropionate reductase [Ochrobactrum anthropi ATCC
49188]
gi|151562969|gb|ABS16466.1| 2-hydroxy-3-oxopropionate reductase [Ochrobactrum anthropi ATCC
49188]
Length = 293
Score = 37.9 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVY---TQPPRPAGRRGLKSVLSAVHKKAQE 57
MT ++ F+GT L+ + + V+ + P +G K SA + A+
Sbjct: 1 MTRKIAFLGTGLMGAPMASRLLDAGFDVT-VWNRNSAKAAPLAEKGAKLAQSA-AEAAET 58
Query: 58 FSL 60
L
Sbjct: 59 ADL 61
>gi|294675096|ref|YP_003575712.1| hypothetical protein PRU_2462 [Prevotella ruminicola 23]
gi|294473517|gb|ADE82906.1| conserved hypothetical protein [Prevotella ruminicola 23]
Length = 256
Score = 37.9 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKS 46
+++VF+G+ A AL + IV VY++ AG K
Sbjct: 1 MKIVFIGSGNLATQLGLALNEAGQQIVQVYSKTEEHAGELAAKL 44
>gi|298529613|ref|ZP_07017016.1| Pyruvate carboxylase [Desulfonatronospira thiodismutans ASO3-1]
gi|298511049|gb|EFI34952.1| Pyruvate carboxylase [Desulfonatronospira thiodismutans ASO3-1]
Length = 468
Score = 37.9 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 1 MTL-RVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPA 39
M +V+ E A+ L+A + H V VYT+ +
Sbjct: 1 MKKHKVLIANRGEIAIRILKACMDLGHDFVCVYTREDAQS 40
>gi|297841269|ref|XP_002888516.1| hypothetical protein ARALYDRAFT_894321 [Arabidopsis lyrata subsp.
lyrata]
gi|297334357|gb|EFH64775.1| hypothetical protein ARALYDRAFT_894321 [Arabidopsis lyrata subsp.
lyrata]
Length = 95
Score = 37.9 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 28 IVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPAL 63
+ ++ T P + G K + S V + A + LP+
Sbjct: 6 VAAIVTHAPS-SRDSGKKVLPSPVAQYALDKGLPSH 40
>gi|330466495|ref|YP_004404238.1| TrkA domain-containing protein [Verrucosispora maris AB-18-032]
gi|328809466|gb|AEB43638.1| TrkA domain-containing protein [Verrucosispora maris AB-18-032]
Length = 231
Score = 37.9 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 6/28 (21%), Positives = 12/28 (42%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSI 28
M +R+ G + Q L+ + H +
Sbjct: 1 MIMRIAIAGAGNVGRSIAQELIENGHQV 28
>gi|15601885|ref|NP_244957.1| phosphoribosylglycinamide formyltransferase [Pasteurella multocida
subsp. multocida str. Pm70]
gi|12720221|gb|AAK02104.1| PurN [Pasteurella multocida subsp. multocida str. Pm70]
Length = 213
Score = 37.6 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 43/196 (21%), Positives = 76/196 (38%), Gaps = 22/196 (11%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSH------SIVSVYT-QPPRPAGRRGL-KSVLSAV- 51
M ++V + + + LQAL+ + H IV+V + Q A R S+ S V
Sbjct: 1 MK-KIVVLVSGHGS--NLQALIDACHSGQIAGKIVAVISNQAEAYALERAQSASIPSKVF 57
Query: 52 --HKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGH 109
A + ++ S AD+ V+ Y ++ N H
Sbjct: 58 LRKDFANN--------RAMDEQIGHYIESVQADLIVLAGYMKILSPAFTQRFAGKILNIH 109
Query: 110 ASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQE 169
SLLP++ G Q+A+ AG+ E G ++ +++ +D G V KVPI + ++Q
Sbjct: 110 PSLLPKYPGLNTYQQALDAGEREHGTSVHFVNEEVDAGAVILQAKVPIFAEDRIEDIEQR 169
Query: 170 LSVLCAHAMVEAMDKL 185
+ +
Sbjct: 170 VKAQELRIYPLVVKWF 185
>gi|83954343|ref|ZP_00963063.1| 3-hydroxyisobutyrate dehydrogenase [Sulfitobacter sp. NAS-14.1]
gi|83841380|gb|EAP80550.1| 3-hydroxyisobutyrate dehydrogenase [Sulfitobacter sp. NAS-14.1]
Length = 293
Score = 37.6 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 5/30 (16%), Positives = 12/30 (40%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVS 30
M++++ F+G L + H +
Sbjct: 1 MSMKIGFIGLGNMGAPMATNLAKAGHDVAG 30
>gi|260808021|ref|XP_002598806.1| hypothetical protein BRAFLDRAFT_120732 [Branchiostoma floridae]
gi|229284081|gb|EEN54818.1| hypothetical protein BRAFLDRAFT_120732 [Branchiostoma floridae]
Length = 1018
Score = 37.6 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 76/194 (39%), Gaps = 27/194 (13%)
Query: 18 LQALVSSS--------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTK-- 67
LQAL+ S IV V + P G +GL ++A++ +P V +
Sbjct: 827 LQALIDHSTDPKNSSAAEIVLVISNIP---GVKGL--------ERAEKAGIPTKVISHKG 875
Query: 68 ------LGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
++ +E + ++ + + ++ + N H SLLP ++G
Sbjct: 876 YKKREEFDRKVHEALMEAGVEMICLAGFMRILSGWFVQQWTGSLLNIHPSLLPSFKGMNA 935
Query: 122 IQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEA 181
+ A+ AG +G + + + +D G + VP+ + LQ+ + + A
Sbjct: 936 HKLALEAGVRVSGCTVHFVVEEVDAGAIVAQEAVPVKTGDTVESLQERVKIAEHKCYPRA 995
Query: 182 MDKLEQNNLPLSPQ 195
M+ + + + + Q
Sbjct: 996 MELVARRLVAIDSQ 1009
>gi|207111254|ref|ZP_03245416.1| methionyl-tRNA formyltransferase [Helicobacter pylori
HPKX_438_CA4C1]
Length = 58
Score = 37.6 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 234 GAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVRIMRLQRAG 288
+ + K ++L+E++ EG+ E+ + C +G+VRI RLQ G
Sbjct: 4 WPEIFLENSLKLLEVELVENEKSHKEGEILEIDEKGVLVGCLKGSVRIARLQAVG 58
>gi|239586406|gb|ACR83550.1| glycinamide ribonucleotide transformylase [Gallus gallus]
Length = 266
Score = 37.6 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 25/153 (16%)
Query: 18 LQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQE 71
L+AL++S+ IV V + AG GL+ KA+ +P V
Sbjct: 80 LEALINSTKKPTSFAEIVLVVSN---KAGVEGLR--------KAERAGIPTRVIDHKQYG 128
Query: 72 EYEQFL--------SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+F F+ ++ + + ++ + + N H SLLP ++GA +
Sbjct: 129 SRTEFDSAVDRVLEEFSVELICLAGFMRILSGPFVKKWEGKILNIHPSLLPSFKGANAHK 188
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
+ AG TG + + + +D G + F VP
Sbjct: 189 LVLEAGVRVTGCTVHFVAEEVDAGAIIFQEAVP 221
>gi|47825387|ref|NP_001001469.1| trifunctional purine biosynthetic protein adenosine-3 [Gallus
gallus]
gi|131612|sp|P21872|PUR2_CHICK RecName: Full=Trifunctional purine biosynthetic protein
adenosine-3; Includes: RecName:
Full=Phosphoribosylamine--glycine ligase; AltName:
Full=Glycinamide ribonucleotide synthetase; Short=GARS;
AltName: Full=Phosphoribosylglycinamide synthetase;
Includes: RecName:
Full=Phosphoribosylformylglycinamidine cyclo-ligase;
AltName: Full=AIR synthase; Short=AIRS; AltName:
Full=Phosphoribosyl-aminoimidazole synthetase; Includes:
RecName: Full=Phosphoribosylglycinamide
formyltransferase; AltName:
Full=5'-phosphoribosylglycinamide transformylase;
AltName: Full=GAR transformylase; Short=GART
gi|62899|emb|CAA38120.1| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
synthetase-glycinamide ribonucleotide transformylase
[Gallus gallus]
gi|15282287|emb|CAA39779.1| GLYCINAMIDE RIBONUCLEOTIDE SYNTHETASE-AMINOIMIDAZOLE RIBONUCLEOTIDE
SYNTHETASE-GLYCINAMIDE RIBONUCLEOTIDE TRANSFORMYLASE
[Gallus gallus]
Length = 1003
Score = 37.6 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 25/153 (16%)
Query: 18 LQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQE 71
L+AL++S+ IV V + AG GL+ KA+ +P V
Sbjct: 817 LEALINSTKKPTSFAEIVLVVSN---KAGVEGLR--------KAERAGIPTRVIDHKQYG 865
Query: 72 EYEQFL--------SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+F F+ ++ + + ++ + + N H SLLP ++GA +
Sbjct: 866 SRTEFDSAVDRVLEEFSVELICLAGFMRILSGPFVKKWEGKILNIHPSLLPSFKGANAHK 925
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
+ AG TG + + + +D G + F VP
Sbjct: 926 LVLEAGVRVTGCTVHFVAEEVDAGAIIFQEAVP 958
>gi|332653987|ref|ZP_08419731.1| Trk system potassium uptake protein TrkA [Ruminococcaceae
bacterium D16]
gi|332517073|gb|EGJ46678.1| Trk system potassium uptake protein TrkA [Ruminococcaceae
bacterium D16]
Length = 467
Score = 37.6 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQ 34
++++ +GT + + + L++ H I V TQ
Sbjct: 1 MKIIIIGTGKVGFSLAEQLLNEKHDITIVDTQ 32
>gi|67471896|ref|XP_651858.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56468637|gb|EAL46468.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
Length = 1313
Score = 37.6 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 8/105 (7%), Positives = 31/105 (29%), Gaps = 2/105 (1%)
Query: 176 HAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGA 235
H ++ Q + K ++ + + + +
Sbjct: 809 HQHLQCKKCSTIIPEQKITQKHHCDNTHCKNNEISLNLAHRLMNRMCYGNNTMYANQYNM 868
Query: 236 WLEMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAVR 280
+ + + +++S V+ + +I+ + + GA++
Sbjct: 869 --TLAYSSNSIKRFIIDSPEVDSQVSSLAIIDDGLIVGTNSGALK 911
>gi|163796662|ref|ZP_02190621.1| hypothetical protein BAL199_23202 [alpha proteobacterium BAL199]
gi|159178222|gb|EDP62767.1| hypothetical protein BAL199_23202 [alpha proteobacterium BAL199]
Length = 288
Score = 37.6 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 53/273 (19%), Positives = 100/273 (36%), Gaps = 21/273 (7%)
Query: 14 AVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEY 73
AT++ALV+S+ + + P + R + + + +P + +
Sbjct: 13 GAATVEALVASNVIPARLISYPQKGDPSRAFEQ----IKLIGLRYGIPFVRAATPAFADD 68
Query: 74 EQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNET 133
E + Q + H SLLPR+RG AP A++ GD E
Sbjct: 69 EWVMLVGW-------------QYRVEPVTDRTIVFHDSLLPRYRGFAPTATALINGDCEI 115
Query: 134 GIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLS 193
GI ++ + +D GP+ R+ + I + +V A + ++ L +
Sbjct: 116 GITAIRPVEAVDAGPILGQRRWMVEYPIRARAALERQAVATADLAGNLLHEIVNGTLMTT 175
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENVHNHIR-ALSPFPGAWLEMMIGNKHERIKLLE 252
Q TY+ + + +++ RSAE + I PF GA + +
Sbjct: 176 EQDPMAATYSLWRDEQDYFIDWTRSAETICRTIDALSYPFMGARTRIDGREVIVDEARIV 235
Query: 253 SQLVEGEGKPGEVIN---PNFTIACSQGAVRIM 282
LV G++ + + C +G +R+
Sbjct: 236 DDLVFERRDIGKIWSLDPDGPIVVCGRGCLRVT 268
>gi|189466741|ref|ZP_03015526.1| hypothetical protein BACINT_03117 [Bacteroides intestinalis DSM
17393]
gi|189435005|gb|EDV03990.1| hypothetical protein BACINT_03117 [Bacteroides intestinalis DSM
17393]
Length = 264
Score = 37.6 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQ 34
+VF+G A +AL + IV VY++
Sbjct: 10 IVFIGAGNLATNLAKALYKNGFRIVQVYSR 39
>gi|307320461|ref|ZP_07599877.1| formyl transferase domain protein [Sinorhizobium meliloti AK83]
gi|306893874|gb|EFN24644.1| formyl transferase domain protein [Sinorhizobium meliloti AK83]
Length = 305
Score = 37.6 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 72/196 (36%), Gaps = 11/196 (5%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSS--HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS 59
R+ F GT A L+ ++ + SI ++ R + + + A+E
Sbjct: 6 PKRLAFAGTRGLASQCLRFIIQTCGADSISAIL-GAARESPSWWSSETPAELWDIAKEHR 64
Query: 60 LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGA 119
+P + +D V V + + P +L K G N H + LP++RG+
Sbjct: 65 IPYVTSMDDLPCH--------SDYLVSVMWNRLFPSSVLARFKFGGINFHPAPLPQYRGS 116
Query: 120 APIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMV 179
AI+ GD + G+ + + + D G + PI + L A
Sbjct: 117 FARTHAILNGDKQFGVTVHLLTERADAGDILNEVFFPILDSETALSLDTRSQQYGLAAFC 176
Query: 180 EAMDKLEQNNLPLSPQ 195
E +L +L PQ
Sbjct: 177 ETWMRLLDGSLVARPQ 192
>gi|160871576|ref|ZP_02061708.1| hypothetical protein RICGR_0217 [Rickettsiella grylli]
gi|159120375|gb|EDP45713.1| hypothetical protein RICGR_0217 [Rickettsiella grylli]
Length = 337
Score = 37.6 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 39/241 (16%), Positives = 69/241 (28%), Gaps = 10/241 (4%)
Query: 49 SAVHKKAQEFSLP---ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGF 105
S + + L + +F D V + IP + K+
Sbjct: 34 SPFKQL-YKHKFKDKLYLFSDIKDPTLWGTINAFQPDFIVSCVFSEKIPNEHIQQAKILA 92
Query: 106 YNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAG 165
N H S LP R I+ + + K+ +H D+G + F K + S +
Sbjct: 93 VNIHPSALPEIRTGDSSFWNILLESETYTVTMHKLTEHWDSGDIIFSDKRKLQSYATKSS 152
Query: 166 LQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNH 225
+ + LE N + Q K +N SA +
Sbjct: 153 MIDDFRYYMRDNADRFQAALESKNRKIIFQTNGKYYPKPKTKH--FYLNLDESAIFIDRL 210
Query: 226 IRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPG--EVINPNFTIACSQGAVRIMR 283
IRA + + + + PG E+I+ + ++I
Sbjct: 211 IRACNDEISVIVRFKEYQVILLESI--ALPKTSTKPPGFIEIIDNKLILNTVDYKLQINV 268
Query: 284 L 284
L
Sbjct: 269 L 269
>gi|159046451|ref|YP_001542122.1| TrkA domain-containing protein [Dinoroseobacter shibae DFL 12]
gi|157914210|gb|ABV95641.1| potassium uptake system protein TrkA [Dinoroseobacter shibae DFL
12]
Length = 219
Score = 37.6 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSV 31
+R++ +G S F A + L+ + H ++ +
Sbjct: 1 MRIIILGASRFGRAIAEQLIDAEHEVIVI 29
>gi|94966767|ref|NP_001035563.1| trifunctional purine biosynthetic protein adenosine-3 [Bos taurus]
gi|75040086|sp|Q59A32|PUR2_BOVIN RecName: Full=Trifunctional purine biosynthetic protein
adenosine-3; Includes: RecName:
Full=Phosphoribosylamine--glycine ligase; AltName:
Full=Glycinamide ribonucleotide synthetase; Short=GARS;
AltName: Full=Phosphoribosylglycinamide synthetase;
Includes: RecName:
Full=Phosphoribosylformylglycinamidine cyclo-ligase;
AltName: Full=AIR synthase; Short=AIRS; AltName:
Full=Phosphoribosyl-aminoimidazole synthetase; Includes:
RecName: Full=Phosphoribosylglycinamide
formyltransferase; AltName:
Full=5'-phosphoribosylglycinamide transformylase;
AltName: Full=GAR transformylase; Short=GART
gi|61966460|emb|CAG47113.1| glycinamide ribonucleotide formyltransferase, isoform 1 [Bos
taurus]
gi|113912153|gb|AAI22574.1| Phosphoribosylglycinamide formyltransferase,
phosphoribosylglycinamide synthetase,
phosphoribosylaminoimidazole synthetase [Bos taurus]
gi|296491672|gb|DAA33705.1| trifunctional purine biosynthetic protein adenosine-3 [Bos taurus]
Length = 1010
Score = 37.6 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 62/169 (36%), Gaps = 31/169 (18%)
Query: 4 RVVFM--GTSEFAVATLQALVSSSHS------IVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
RV + GT LQAL+ S+ IV V + AG KA
Sbjct: 809 RVAVLISGTGS----NLQALIDSTREPSSLAHIVIVISNKAAVAGL-----------DKA 853
Query: 56 QEFSLPALVPTKLGQEEYEQFL--------SFNADVAVVVAYGLVIPQRILNATKLGFYN 107
++ +P V + F F+ D+ + + ++ + N
Sbjct: 854 EKAGIPTRVINHKLYKNRAAFDTAIDEVLEEFSTDIVCLAGFMRILSGPFVRKWNGKMLN 913
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
H SLLP ++G+ ++ + AG TG + + + +D G + VP
Sbjct: 914 IHPSLLPSFKGSNAHEQVLDAGVTVTGCTVHFVAEDVDAGQIILQEAVP 962
>gi|227509995|ref|ZP_03940044.1| acetyl-CoA carboxylase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227190601|gb|EEI70668.1| acetyl-CoA carboxylase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 470
Score = 37.6 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPA 39
M +V+ E AV ++AL V+VY+ + +
Sbjct: 12 MFKKVLVANRGEIAVQIIRALHDMDIEAVAVYSSADKDS 50
>gi|227523057|ref|ZP_03953106.1| acetyl-CoA carboxylase [Lactobacillus hilgardii ATCC 8290]
gi|227089875|gb|EEI25187.1| acetyl-CoA carboxylase [Lactobacillus hilgardii ATCC 8290]
Length = 470
Score = 37.6 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPA 39
M +V+ E AV ++AL V+VY+ + +
Sbjct: 12 MFKKVLVANRGEIAVQIIRALHDMDIEAVAVYSSADKDS 50
>gi|227512929|ref|ZP_03942978.1| acetyl-CoA carboxylase [Lactobacillus buchneri ATCC 11577]
gi|227083929|gb|EEI19241.1| acetyl-CoA carboxylase [Lactobacillus buchneri ATCC 11577]
Length = 470
Score = 37.6 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 1 MTLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPA 39
M +V+ E AV ++AL V+VY+ + +
Sbjct: 12 MFKKVLVANRGEIAVQIIRALHDMDIEAVAVYSSADKDS 50
>gi|332639133|ref|ZP_08417996.1| 3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid
dehydrogenase [Weissella cibaria KACC 11862]
Length = 289
Score = 37.6 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVY--TQPPRPAGRRGLKSVLSAVHKKAQEFSL 60
+++ F+GT + L+ +++ +V V+ T+ + + + + A+ L
Sbjct: 1 MKIGFIGTGVMGRGIINNLLQANYEVV-VFNRTKAHAQSVLDNGATWADSPKEIAEAADL 59
>gi|90415593|ref|ZP_01223527.1| 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase [marine
gamma proteobacterium HTCC2207]
gi|90332916|gb|EAS48086.1| 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase [marine
gamma proteobacterium HTCC2207]
Length = 314
Score = 37.6 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 13/62 (20%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLP 61
+++V G F L+AL + + +VS+ AG V SA A++F +P
Sbjct: 1 MKIVVAGEGAFGRKHLEALRNIENIEVVSL-------AGG-----VESATGDVAKDFGIP 48
Query: 62 AL 63
Sbjct: 49 HW 50
>gi|47217476|emb|CAG10245.1| unnamed protein product [Tetraodon nigroviridis]
Length = 990
Score = 37.6 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 25/240 (10%), Positives = 51/240 (21%), Gaps = 10/240 (4%)
Query: 41 RRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFN--ADVAVVVAYGLVIPQRIL 98
R G K+ E L + ++ V V + ++
Sbjct: 531 RCGSKTREVPCETIQTEEGLVFTCEKRCSKKRSCGRHKCGELCCVIVEHKCLQICGYKLN 590
Query: 99 NATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPIS 158
H ++ + G I K + + R
Sbjct: 591 CGLHRCQEPCHRGNCDPCWQSSFDELTCHCGLTVLYPPIACGTKPPECKNMCTRRHECEH 650
Query: 159 SNINTAGLQQELSVL-CAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCR 217
+ +++ +++N+P Q + K E+ R
Sbjct: 651 PVFHNCHSEEKCPPCTFLTEKWCMGKHEKRSNIPCHLQDISCGLVCNKALPCESH----R 706
Query: 218 SAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQG 277
H + + + G PG T+ C G
Sbjct: 707 CRRICHRGECLADGGCLQPCSLPRPDCGHPC---SAPCHRGADCPGTPCTSKVTLQCGCG 763
>gi|224106097|ref|XP_002314042.1| predicted protein [Populus trichocarpa]
gi|222850450|gb|EEE87997.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 37.6 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 16/196 (8%), Positives = 34/196 (17%), Gaps = 8/196 (4%)
Query: 38 PAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRI 97
P G K S + A+ L + +
Sbjct: 164 PCKSCGKKYHRSCLKTWARHRDL--FHWSSWTCPSCQTCEVCRKTGDPNKFVFCKRCDGA 221
Query: 98 LNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDN------ETGIAIMKMDKHLDTGPVAF 151
+ + + S P + + + D
Sbjct: 222 YHCYCQHPPHKNVSSGPYLCPKHTRCHSCGSSVPGNGLSVRWFLGYTCCDACGRLFVKGN 281
Query: 152 MRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGET 211
V + ++ +C + D + N
Sbjct: 282 YCPVCLKVYRDSESTPMVCCDICQRWVHCHCDGISDEKYLQFQVDGNLQYQCATCRGECY 341
Query: 212 RVNFCRSAENVHNHIR 227
+V + A R
Sbjct: 342 QVKDLKDAIQELWRRR 357
>gi|319956004|ref|YP_004167267.1| phosphoribosylglycinamide formyltransferase [Nitratifractor
salsuginis DSM 16511]
gi|319418408|gb|ADV45518.1| phosphoribosylglycinamide formyltransferase [Nitratifractor
salsuginis DSM 16511]
Length = 185
Score = 37.2 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 56/163 (34%), Gaps = 24/163 (14%)
Query: 1 MTLRVVFM--GTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
M R+V + G L+ L + + T P G A+ +
Sbjct: 1 MK-RIVVLFSGAGSNLAYILKHLHGKEVEVAAAITNNPEAGGI-----------AIAESY 48
Query: 59 SLPALVPTKLGQEEYEQFL--------SFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
+P V + E F + D+ V+ + ++ K+ N H
Sbjct: 49 GVPVEVMDHRKFPDRESFDRELVKRIEKYEPDLTVLAGFMRILTPEFT--EKVRAINLHP 106
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMR 153
SLLPR RG I+++ E G+ + +++ LD G
Sbjct: 107 SLLPRHRGLDAIRKSWEDEHPEGGVTVHWVNEELDGGEPILQY 149
>gi|126466113|ref|YP_001041222.1| TrkA domain-containing protein [Staphylothermus marinus F1]
gi|126014936|gb|ABN70314.1| TrkA-N domain protein [Staphylothermus marinus F1]
Length = 216
Score = 37.2 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSV 31
+++V G E +AL+ H +V +
Sbjct: 1 MKIVIAGGGETGAELAEALIKEEHDVVLI 29
>gi|83647665|ref|YP_436100.1| formyltetrahydrofolate deformylase [Hahella chejuensis KCTC 2396]
gi|83635708|gb|ABC31675.1| formyltetrahydrofolate deformylase [Hahella chejuensis KCTC 2396]
Length = 284
Score = 37.2 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 55/171 (32%), Gaps = 28/171 (16%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSH------SIVSVYTQPPRPAGRRGLKSVLSAVHKKA 55
R+V M + E L L+ H IV V + + +
Sbjct: 87 PKRIVLMASKE--SHCLADLLHRWHAKEMDGEIVGVISNHDD-------------LRRMV 131
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNA-------DVAVVVAYGLVIPQRILNATKLGFYNG 108
+ +P ++ F +V V+ Y ++P + + N
Sbjct: 132 EWHDIPYYHVPVDPDDKSVAFAEVERLVDALDAEVIVLARYMQILPPELCDRYTGRIINI 191
Query: 109 HASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISS 159
H S LP + GA P +A G G + + LD GP+ + ++
Sbjct: 192 HHSFLPSFAGARPYHQAYKRGVKLIGATCHYVTQDLDEGPIIEQDVIRVNH 242
>gi|307544881|ref|YP_003897360.1| phosphoribosylglycinamide formyltransferase [Halomonas elongata DSM
2581]
gi|307216905|emb|CBV42175.1| phosphoribosylglycinamide formyltransferase [Halomonas elongata DSM
2581]
Length = 244
Score = 37.2 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 17/145 (11%)
Query: 18 LQALVSS------SHSIVSVYT-QPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQ 70
LQAL+ + I +V + QP +R + + AV LP
Sbjct: 35 LQALIEAQEHDRLGGEIAAVVSNQPDAYGLKRARDAGIDAVA-------LPHREYESREA 87
Query: 71 EE---YEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIM 127
+ + D+ ++ + ++ R + N H SLLP ++G RA+
Sbjct: 88 FDGALIKVIERHEPDLVILAGFMRILTPRFVQRFLGRMLNIHPSLLPAYQGLHTHARALA 147
Query: 128 AGDNETGIAIMKMDKHLDTGPVAFM 152
G E G ++ + + LD GPVA
Sbjct: 148 DGVTEHGCSVHFVTEELDGGPVALQ 172
>gi|262279683|ref|ZP_06057468.1| NADP oxidoreductase coenzyme F420-dependent family protein
[Acinetobacter calcoaceticus RUH2202]
gi|262260034|gb|EEY78767.1| NADP oxidoreductase coenzyme F420-dependent family protein
[Acinetobacter calcoaceticus RUH2202]
Length = 259
Score = 37.2 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVY 32
+++ +G+ A QAL++ H+IV VY
Sbjct: 1 MKISLIGSGRVAFHLAQALLAQGHNIVQVY 30
>gi|84685621|ref|ZP_01013518.1| hypothetical protein 1099457000253_RB2654_06609 [Maritimibacter
alkaliphilus HTCC2654]
gi|84666287|gb|EAQ12760.1| hypothetical protein RB2654_06609 [Rhodobacterales bacterium
HTCC2654]
Length = 206
Score = 37.2 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 8/42 (19%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 3 LRVVFMG-TSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRG 43
++V +G + + L+ L H + ++ P A G
Sbjct: 5 MKVALIGASGKAGSRVLKELADRGHEVTALVRNPDNVADLPG 46
>gi|324325110|gb|ADY20370.1| putative phage tail tape measure protein [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 1083
Score = 37.2 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 16/194 (8%), Positives = 44/194 (22%), Gaps = 1/194 (0%)
Query: 72 EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGH-ASLLPRWRGAAPIQRAIMAGD 130
Y+ + +D+ + + + + L W +
Sbjct: 538 WYDTICKWFSDMIAAIGEWIAPWWNPIKEWLVKTLFEWTIGLRDWWNAISEWFTTTKEDF 597
Query: 131 NETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNL 190
+ + + A +L + LE+ N
Sbjct: 598 VNWLSGWWSAIVDWFSVSTEEWKTRLGDWHQAIAEWWDKLPEDTLKWLENISKALEEWNK 657
Query: 191 PLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKL 250
Q+ ++ + +E + + + + +
Sbjct: 658 KQIDQLVEDFKKWWEVIDNWFTETKEKWSEKLETWSENIQKWWEEMPDKIYSWFTGWWDK 717
Query: 251 LESQLVEGEGKPGE 264
+ + E +GK GE
Sbjct: 718 ISTWYDETKGKIGE 731
>gi|68536405|ref|YP_251110.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Corynebacterium jeikeium K411]
gi|123650729|sp|Q4JUL5|MNMA_CORJK RecName: Full=tRNA-specific 2-thiouridylase mnmA
gi|68264004|emb|CAI37492.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
[Corynebacterium jeikeium K411]
Length = 395
Score = 37.2 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Query: 3 LRVVFM--GTSEFAVATLQALVSSSHSIVSV---YTQPPR--PAGRRG-LKSVLSAVHKK 54
+RVV G + AVA +AL + H ++ V +Q P AG RG SA ++
Sbjct: 1 MRVVAAMSGGVDSAVAASRAL-EAGHEVIGVHLALSQSPEAVRAGSRGCCSLEDSADARR 59
Query: 55 -AQEFSLPALVPTK 67
A + +P V
Sbjct: 60 VADKLGIPFYVWDF 73
>gi|289548816|ref|YP_003473804.1| formyl transferase [Thermocrinis albus DSM 14484]
gi|289182433|gb|ADC89677.1| formyl transferase domain protein [Thermocrinis albus DSM 14484]
Length = 560
Score = 37.2 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 37/195 (18%), Positives = 72/195 (36%), Gaps = 10/195 (5%)
Query: 100 ATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISS 159
H P RG + + AI+ + G+ +++ + D G V R +
Sbjct: 65 YENYLTLIIHPGP-PGDRGPSALDWAILRRERRWGVTLLEATEEYDAGDVWAYRTFSMRP 123
Query: 160 NINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSA 219
++ + E++ +++A+ LE+ + PQ ++ +
Sbjct: 124 ARKSSLYRNEVTEGAVECVLQAVTMLEEGKVTKKPQEYGVWNPKVEVEWRRINWE-KDNT 182
Query: 220 ENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVI---NPNFTIACSQ 276
E+V + A PGA E+ ES+L G+PG ++ + IA +
Sbjct: 183 ESVLTKVYASDGHPGAPAELFGREFLLYNAFPESKL---RGEPGRILAVRDEAVCIATTD 239
Query: 277 GAVRIMRLQRAGGRV 291
GAV I + R +
Sbjct: 240 GAVWITHM-RE-KKR 252
>gi|332868402|ref|ZP_08438133.1| NADP oxidoreductase coenzyme F420-dependent [Acinetobacter
baumannii 6013113]
gi|332733401|gb|EGJ64584.1| NADP oxidoreductase coenzyme F420-dependent [Acinetobacter
baumannii 6013113]
Length = 259
Score = 37.2 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVY 32
+++ +G+ A +AL++ H+IV VY
Sbjct: 1 MKISLLGSGRVAFHLAKALLAKGHNIVQVY 30
>gi|239503513|ref|ZP_04662823.1| hypothetical protein AbauAB_14477 [Acinetobacter baumannii AB900]
Length = 259
Score = 37.2 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVY 32
+++ +G+ A +AL++ H+IV VY
Sbjct: 1 MKISLLGSGRVAFHLAKALLAKGHNIVQVY 30
>gi|226357175|ref|YP_002786915.1| trehalose-phosphatase [Deinococcus deserti VCD115]
gi|226319165|gb|ACO47161.1| putative trehalose-phosphatase (Trehalose 6-phosphate phosphatase)
(TPP) [Deinococcus deserti VCD115]
Length = 239
Score = 37.2 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 15/98 (15%)
Query: 11 SEFAVA-TLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLG 69
E L+AL+++ H +V T GRR V + A ++P L+ L
Sbjct: 37 PEPGAPEALKALLAAGHHRAAVVT------GRR--------VAEAAAFLNVPELMVVGLH 82
Query: 70 QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYN 107
E+ D A + +P + +
Sbjct: 83 GMEWPDQELHPPDTAALQIIKAALPDAPGVRHEEKGWT 120
>gi|169796597|ref|YP_001714390.1| hypothetical protein ABAYE2574 [Acinetobacter baumannii AYE]
gi|213156289|ref|YP_002318709.1| hypothetical protein AB57_1331 [Acinetobacter baumannii AB0057]
gi|215484058|ref|YP_002326283.1| NADP oxidoreductase coenzyme F420-dependent family protein
[Acinetobacter baumannii AB307-0294]
gi|301344742|ref|ZP_07225483.1| NADP oxidoreductase coenzyme F420-dependent family protein
[Acinetobacter baumannii AB056]
gi|301510761|ref|ZP_07235998.1| NADP oxidoreductase coenzyme F420-dependent family protein
[Acinetobacter baumannii AB058]
gi|301595170|ref|ZP_07240178.1| NADP oxidoreductase coenzyme F420-dependent family protein
[Acinetobacter baumannii AB059]
gi|332853537|ref|ZP_08434801.1| NADP oxidoreductase coenzyme F420-dependent [Acinetobacter
baumannii 6013150]
gi|169149524|emb|CAM87413.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
gi|213055449|gb|ACJ40351.1| hypothetical protein AB57_1331 [Acinetobacter baumannii AB0057]
gi|213987884|gb|ACJ58183.1| NADP oxidoreductase coenzyme F420-dependent family protein
[Acinetobacter baumannii AB307-0294]
gi|332728570|gb|EGJ59942.1| NADP oxidoreductase coenzyme F420-dependent [Acinetobacter
baumannii 6013150]
Length = 259
Score = 37.2 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVY 32
+++ +G+ A +AL++ H+IV VY
Sbjct: 1 MKISLLGSGRVAFHLAKALLAKGHNIVQVY 30
>gi|116490342|ref|YP_809886.1| nucleoside-diphosphate-sugar epimerase [Oenococcus oeni PSU-1]
gi|116091067|gb|ABJ56221.1| Predicted nucleoside-diphosphate-sugar epimerase [Oenococcus oeni
PSU-1]
Length = 210
Score = 37.2 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 3 LRVVFMGTSEF-AVATLQALVSSSHSIVSV 31
+++V G S F L+ LV H I+SV
Sbjct: 1 MKIVVFGGSGFIGQKLLEILVKRGHDIISV 30
>gi|326913241|ref|XP_003202948.1| PREDICTED: trifunctional purine biosynthetic protein
adenosine-3-like [Meleagris gallopavo]
Length = 1003
Score = 37.2 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 25/153 (16%)
Query: 18 LQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQE 71
L+AL++S+ IV V + AG GL+ KA+ +P V
Sbjct: 817 LEALINSTKKPTSFAEIVLVVSN---KAGVEGLR--------KAERAGIPTRVIDHKLYG 865
Query: 72 EYEQFL--------SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+F F+ ++ + + ++ + + N H SLLP ++GA +
Sbjct: 866 SRIEFDSAVDRVLEEFSVELICLAGFMRILSGPFVKKWEGKILNIHPSLLPSFKGANAHK 925
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
+ AG TG + + + +D G + F VP
Sbjct: 926 LVLEAGVRVTGCTVHFVAEEVDAGAIIFQEAVP 958
>gi|290889739|ref|ZP_06552827.1| hypothetical protein AWRIB429_0217 [Oenococcus oeni AWRIB429]
gi|290480563|gb|EFD89199.1| hypothetical protein AWRIB429_0217 [Oenococcus oeni AWRIB429]
Length = 210
Score = 37.2 bits (84), Expect = 3.5, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 3 LRVVFMGTSEF-AVATLQALVSSSHSIVSV 31
+++V G S F L+ LV H I+SV
Sbjct: 1 MKIVVFGGSGFIGQKLLEILVKRGHDIISV 30
>gi|320165575|gb|EFW42474.1| methionyl-tRNA formyltransferase [Capsaspora owczarzaki ATCC
30864]
Length = 528
Score = 37.2 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 3 LRVVFMGTSEFAVATLQALVSSS 25
LR++F G+ F+ +L+ALV S
Sbjct: 44 LRILFFGSDRFSALSLKALVDHS 66
>gi|68299602|gb|AAT76522.2| glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide
synthetase-glycinamide ribonucleotide transformylase
[Gallus gallus]
Length = 1003
Score = 37.2 bits (84), Expect = 3.6, Method: Composition-based stats.
Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 25/153 (16%)
Query: 18 LQALVSSS------HSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQE 71
L+AL++S+ IV V + AG GL+ KA+ +P V
Sbjct: 817 LEALINSTKKPTSFAEIVLVVSN---KAGVEGLR--------KAERAGIPTRVIDHKLYG 865
Query: 72 EYEQFL--------SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+F F+ ++ + + ++ + + N H SLLP ++GA +
Sbjct: 866 SRTEFDSAVDRVLEEFSVELICLAGFMRILSGPFVKKWEGKILNIHPSLLPSFKGANAHK 925
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVP 156
+ AG TG + + + +D G + F VP
Sbjct: 926 LVLEAGVRVTGCTVHFVAEEVDAGAIIFQEAVP 958
>gi|326314985|ref|YP_004232657.1| D-amino-acid dehydrogenase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323371821|gb|ADX44090.1| D-amino-acid dehydrogenase [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 444
Score = 37.2 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 17/143 (11%), Positives = 38/143 (26%), Gaps = 12/143 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ + +G ++T L+ H +V V QP S A +
Sbjct: 1 MKTIVLGAGIIGISTAWHLLERGHEVVVVDRQPD-----------ASLETSYANAAQISV 49
Query: 63 -LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAP 121
+E + L + D + + + + + + R
Sbjct: 50 SYCEPWANREAPWKALKWMFDKEAPLLFRPQLDWDQWRWSLKFLAQCNDAAFARNVQQIV 109
Query: 122 IQRAIMAGDNETGIAIMKMDKHL 144
A + + +D H
Sbjct: 110 ALGAYSHAALKDMVRATGIDYHR 132
>gi|332019813|gb|EGI60274.1| Trifunctional purine biosynthetic protein adenosine-3 [Acromyrmex
echinatior]
Length = 1036
Score = 36.8 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 58/151 (38%), Gaps = 13/151 (8%)
Query: 18 LQALVSS--------SHSIVSVYTQPPRPAGRRGLKSVL-SAVHKKAQEFSLPALVPTKL 68
LQ+L+++ IV V + P G GLK +++ +
Sbjct: 848 LQSLINATQDPSQHIGAEIVLVISNKP---GVEGLKRAERASIKTVVIKH-TDYPSRETF 903
Query: 69 GQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMA 128
+ + ++ + + ++ Q+ + K N H SLLP ++GA + + A
Sbjct: 904 DAAMNVELHAAGVEIVCLAGFMRILSQQFVKHWKGALLNIHPSLLPSFKGANAHKDVLAA 963
Query: 129 GDNETGIAIMKMDKHLDTGPVAFMRKVPISS 159
+G + ++ +D+G + VP+
Sbjct: 964 RVRVSGCTVHFVEVDIDSGAIVEQEVVPVFP 994
>gi|257052352|ref|YP_003130185.1| TrkA-N domain protein [Halorhabdus utahensis DSM 12940]
gi|256691115|gb|ACV11452.1| TrkA-N domain protein [Halorhabdus utahensis DSM 12940]
Length = 228
Score = 36.8 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVH 52
+R V +G+ + T +AL S H +V V + RG ++ +H
Sbjct: 1 MRFVIVGSGRVGLRTARALDESGHEVVLV--EADPKTADRGREAGFEVIH 48
>gi|327310355|ref|YP_004337252.1| saccharopine dehydrogenase [Thermoproteus uzoniensis 768-20]
gi|326946834|gb|AEA11940.1| saccharopine dehydrogenase, putative [Thermoproteus uzoniensis
768-20]
Length = 350
Score = 36.8 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 5/29 (17%), Positives = 13/29 (44%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSV 31
++++ +G + L H +V+V
Sbjct: 1 MKILVLGCGNIGRFVSRHLHDRGHEVVTV 29
>gi|255553540|ref|XP_002517811.1| protein binding protein, putative [Ricinus communis]
gi|223543083|gb|EEF44618.1| protein binding protein, putative [Ricinus communis]
Length = 734
Score = 36.8 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 16/191 (8%), Positives = 32/191 (16%), Gaps = 8/191 (4%)
Query: 43 GLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATK 102
G K S + AQ L + +
Sbjct: 182 GKKYHRSCLKSWAQHRDL--FHWSSWTCPSCRICEICRRTGDPNKFMFCKRCDGAYHCYC 239
Query: 103 LGFYNGHASLLPRWRGAAPIQRAIMAGDN------ETGIAIMKMDKHLDTGPVAFMRKVP 156
+ + S P + + + D V
Sbjct: 240 QHPPHKNVSSGPYLCPKHTRCHSCGSSVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVC 299
Query: 157 ISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFC 216
+ ++ +C + + D + N +V
Sbjct: 300 LKVYRDSESTPMVCCDICQRWVHCSCDGISDEKYLQFQVDGNLQYKCATCRGECYQVKDH 359
Query: 217 RSAENVHNHIR 227
A R
Sbjct: 360 EDAVQELWRRR 370
>gi|303322406|ref|XP_003071196.1| hypothetical protein CPC735_037570 [Coccidioides posadasii C735
delta SOWgp]
gi|240110895|gb|EER29051.1| hypothetical protein CPC735_037570 [Coccidioides posadasii C735
delta SOWgp]
gi|320040605|gb|EFW22538.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 277
Score = 36.8 bits (83), Expect = 4.1, Method: Composition-based stats.
Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 8/89 (8%)
Query: 3 LRVVFMG-TSEFAVATLQALVSSSHSIVSVYTQPP------RPAGRRGLKSVLSAVHKKA 55
+RV+ +G T + + AL++ H +V VY + P P G R +V + A
Sbjct: 1 MRVILLGATGNLGIRLVAALLAHGHQVV-VYVRSPQKFANMAPEGVRSRVTVFNGDATDA 59
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVA 84
+ + +
Sbjct: 60 ESLKTAIREHHCDAMVDTAGNQVWPWKEH 88
>gi|218778486|ref|YP_002429804.1| formyl transferase domain protein [Desulfatibacillum alkenivorans
AK-01]
gi|218759870|gb|ACL02336.1| formyl transferase domain protein [Desulfatibacillum alkenivorans
AK-01]
Length = 257
Score = 36.8 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 44/129 (34%), Gaps = 17/129 (13%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPP--RPAGRRGLKSVLSAVHKKAQEFSL 60
++++F+G + T L S IV P R G + + L
Sbjct: 1 MKILFLGNNWVGWRTAAFLKESGAQIVGAVLHKPEERKFG-----------KELLETLGL 49
Query: 61 P----ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRW 116
E + S + D+ V +G ++ + L+ G N H +LLP
Sbjct: 50 DQGRIFDASMLRDSEVLDAIRSLSPDLGVSAYFGTILKKEFLDIFPEGCINVHPALLPFN 109
Query: 117 RGAAPIQRA 125
RGA P
Sbjct: 110 RGAHPNVWN 118
>gi|313239958|emb|CBY32321.1| unnamed protein product [Oikopleura dioica]
Length = 612
Score = 36.8 bits (83), Expect = 4.4, Method: Composition-based stats.
Identities = 28/231 (12%), Positives = 49/231 (21%), Gaps = 20/231 (8%)
Query: 33 TQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLV 92
T PPR ++ K + V + E +P+ T + + +
Sbjct: 100 TPPPRKNAKKSKKENKNPVSVR--EVPIPSFKLTTRRPQTTTRRTTTTRRTTTTRQAMRT 157
Query: 93 IPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFM 152
P H P + + + K+ TG
Sbjct: 158 QPVPK----------NHKGWTPWTQWSRCTRSCGGGHQYRERSCTDGCQKNPRTGQYLSW 207
Query: 153 RKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETR 212
+ P + Q + + +
Sbjct: 208 HQEPRGCSRFPCPYGQRSTFGSYGPWGPCSMTCGRGMQ--------MSYQTCVSGACKNE 259
Query: 213 VNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPG 263
+ P AW E N + L E + GKPG
Sbjct: 260 PKSSYPYNQRPCTMSQWCPAWNAWGEWSECNVNCGGGLKERKRTCSTGKPG 310
>gi|307211378|gb|EFN87505.1| Protein crumbs [Harpegnathos saltator]
Length = 2241
Score = 36.8 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 24/246 (9%), Positives = 44/246 (17%), Gaps = 21/246 (8%)
Query: 55 AQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQR---------ILNATKLGF 105
+ F N ++ + GF
Sbjct: 448 CLNNGVCYDYYGTYICHCPAGFEGQNCELNLNECLSGPCNNDGECIDDVGTYHCKCPAGF 507
Query: 106 YNGHA---SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNIN 162
H L A + + M + +
Sbjct: 508 TGRHCELRGLCENAACPANSICVEDSHGAQCVCNPGFMGNPPNCTVNYCASNPCANGGTC 567
Query: 163 TAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENV 222
+G L Q +F
Sbjct: 568 ASGRDGFNCTCPPEWRGMNCQINVDECLSQPCQNGGTCVDRVNGYTCNCTRDFMGDNCER 627
Query: 223 HNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEV----INPNFTIACSQGA 278
A++P + + R + E G G+V I+ +AC G
Sbjct: 628 EYDPCAVNP-CQNNGSCTLMPRSRREFVCEC----PRGFEGKVCDVNIDDCIGVACPDGK 682
Query: 279 VRIMRL 284
V + +
Sbjct: 683 VCVDDV 688
>gi|242398611|ref|YP_002994035.1| Pyrroline-5-carboxylate reductase [Thermococcus sibiricus MM 739]
gi|242265004|gb|ACS89686.1| Pyrroline-5-carboxylate reductase [Thermococcus sibiricus MM 739]
Length = 260
Score = 36.8 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 6/28 (21%), Positives = 13/28 (46%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVS 30
+R+ +G A +AL + +V+
Sbjct: 1 MRIAVIGAGTIGSAVAKALAEEGYEVVA 28
>gi|152993717|ref|YP_001359438.1| methyltransferase FkbM [Sulfurovum sp. NBC37-1]
gi|151425578|dbj|BAF73081.1| methyltransferase FkbM [Sulfurovum sp. NBC37-1]
Length = 375
Score = 36.8 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 14/109 (12%), Positives = 27/109 (24%), Gaps = 6/109 (5%)
Query: 5 VVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF---SLP 61
+V G FA L L ++ ++ + + G++ L V +
Sbjct: 21 IVLYGAGNFAKECLTTLKKHNYEVLFII---DKYKGKQNLFIDSVPVISFDDSRLTEQIK 77
Query: 62 ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
L L+ D + +I H
Sbjct: 78 INSSCILSIFNAYVDLALIQDDIRAENFVNIINPMEFIDLFYDDMGDHF 126
>gi|149571458|ref|XP_001518076.1| PREDICTED: similar to Mitochondrial methionyl-tRNA
formyltransferase, partial [Ornithorhynchus anatinus]
Length = 290
Score = 36.8 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 87/241 (36%), Gaps = 16/241 (6%)
Query: 75 QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETG 134
+ + ++ + G N H S LPRWRG AP+ ++ GD TG
Sbjct: 8 WRAEESPPMVLLDGQVSKASRHDAVEEFTGILNVHPSYLPRWRGPAPVIHTVLHGDTVTG 67
Query: 135 IAIMKMDK-HLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLS 193
+ IM++ D GP+ + + L+ LS L A ++ + L +
Sbjct: 68 VTIMQIKPKRFDVGPIIKQESIAVPPLCTAKDLEAILSKLGATVLLSVLKNLPDSLKNKR 127
Query: 194 PQIENGITYAEKISKGETRVNFCRSAENV----HNHIRALSP----FPGAWLEMMIGNKH 245
Q + G+T A KIS VN+ + + P + + ++++
Sbjct: 128 QQPKEGVTLAPKISAALRCVNWEEQTPEQILRLQRAVGCIMPLQTVWMDSTIKLLDLVDV 187
Query: 246 ERIKLLESQLVEGEGK-PGEVI----NPNFTIACSQGAVRIMRLQRAGGRVLDIGDFLLG 300
L Q + G+ PG + + + C G V + + R L DF G
Sbjct: 188 HDHPALADQKLSGQEVLPGSLTYHKPSQTLLVRCKGGWVGVRAVIL--KRKLTASDFYNG 245
Query: 301 C 301
Sbjct: 246 Y 246
>gi|302895351|ref|XP_003046556.1| hypothetical protein NECHADRAFT_66361 [Nectria haematococca mpVI
77-13-4]
gi|256727483|gb|EEU40843.1| hypothetical protein NECHADRAFT_66361 [Nectria haematococca mpVI
77-13-4]
Length = 1980
Score = 36.8 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 26/240 (10%), Positives = 52/240 (21%), Gaps = 19/240 (7%)
Query: 33 TQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLV 92
T P RPA R K L V P KL
Sbjct: 337 TSPDRPAKLRDCKGCLDEV---------PVSRCPKLDCGHRMCH----------NCLRRR 377
Query: 93 IPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFM 152
Q + + +++ H + N+ + ++
Sbjct: 378 FKQSMTDPSQMPPSCCHPEPIGLEYVDTLFNPEFKKMWNKKYVEYSIGNRLYCPSRRCGE 437
Query: 153 RKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETR 212
P + + ++ + V + P+ + + + R
Sbjct: 438 WIRPANIYTDRDTGRKAARCDHCNTKVCVACNGRWHFSSKCPRDDETARFLDYARDEGQR 497
Query: 213 VNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTI 272
A ++ A R +S V+ P V + +
Sbjct: 498 RCHKCGAHAENSRCGANFCIVCGQKPKRCECPWFRPDNPDSDQVDDTDGPTLVRRGDIRV 557
>gi|254417787|ref|ZP_05031511.1| NAD binding domain of 6-phosphogluconate dehydrogenase family
[Brevundimonas sp. BAL3]
gi|196183964|gb|EDX78940.1| NAD binding domain of 6-phosphogluconate dehydrogenase family
[Brevundimonas sp. BAL3]
Length = 286
Score = 36.4 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 6/28 (21%), Positives = 12/28 (42%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVS 30
+++ F G + LV + H +V
Sbjct: 1 MKIAFAGLGVMGAPMARHLVQAGHDVVG 28
>gi|170751993|ref|YP_001758253.1| formyl transferase domain-containing protein [Methylobacterium
radiotolerans JCM 2831]
gi|170658515|gb|ACB27570.1| formyl transferase domain protein [Methylobacterium radiotolerans
JCM 2831]
Length = 287
Score = 36.4 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 55/150 (36%), Gaps = 7/150 (4%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPA 62
++ F G +F + L+ + + V ++T+P G+ + +A+ LP
Sbjct: 1 MKFAFAG-IDFLGGVFEGLLDAGWTPVKLFTRP-----CDGVYDHNEVIVARARSLKLPI 54
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
+ ++ D A+VVA + + N H S LP RG P+
Sbjct: 55 QLSRIRERDIEALQAEHGRDWALVVAGYPWLIKG-WKGRAAYGLNFHPSPLPTGRGPYPL 113
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFM 152
RA++ G+ + D G +
Sbjct: 114 FRAVLDRYETWGVTAHVLADGFDAGDILAQ 143
>gi|50308847|ref|XP_454428.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643563|emb|CAG99515.1| KLLA0E10583p [Kluyveromyces lactis]
Length = 366
Score = 36.4 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 60/353 (16%), Positives = 112/353 (31%), Gaps = 67/353 (18%)
Query: 2 TLRVVFMGTSEFA---------------VATLQALVSSSHSIVSVYTQPPRPAGRRGLKS 46
L+V+F G+ +++ + +LQ V T+ P+ GR +
Sbjct: 25 PLKVLFFGSDQYSSHLLSALHSLLRTKDIDSLQ-----------VVTRSPKSCGRYLSEV 73
Query: 47 VLSAVHKKAQEFSLP--ALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLG 104
+ LP T+ S +V + V++G +IP++++
Sbjct: 74 REVPIMSVNDSLGLPPVIKCDTRSDLLGLIDNPSVEFNVLIAVSFGKLIPKQLIEKVDGK 133
Query: 105 FYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDK-HLDTGPVAFMRKVPISSNINT 163
+N H SLLPR+RG++PIQ ++ D TG+ I + D G + I
Sbjct: 134 AFNIHPSLLPRYRGSSPIQYTLLNRDEFTGVTIQSLHPTKFDHGEIIKQTAPLSVQEILK 193
Query: 164 AGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVH 223
G + + MD+L + L Q+ + K + + +
Sbjct: 194 LGTVGKFDEDVPEKVATLMDQLGLKSGELLQQMIRERDFKPKPNPNYEPSLAPKITTEMK 253
Query: 224 NHIRALSP--------------FPGAWLEMMIGNKHERIKLLESQLVEGEG----KPGEV 265
+ + + +++ +L + KPGE
Sbjct: 254 QINWKNERKLRLLAKNDALGSLYCYKLSLPKRKKEVMKKRIIFPELFDLNETISMKPGEF 313
Query: 266 ----INPNFTIACSQGAVRIMRLQRAG--------------GR--VLDIGDFL 298
I C G + LQ G R ++ +FL
Sbjct: 314 KLSEDEKTMIIQCIDGQIGTNVLQFEGFALEPVPTFVNRLNKRCGKMNSNEFL 366
>gi|50086229|ref|YP_047739.1| putative nucleoside-diphosphate-sugar epimerase [Acinetobacter
sp. ADP1]
gi|49532205|emb|CAG69917.1| conserved hypothetical protein; putative
nucleoside-diphosphate-sugar epimerase [Acinetobacter
sp. ADP1]
Length = 293
Score = 36.4 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 2 TLRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRP 38
+ ++F+G + + + L + H I +V ++ P+P
Sbjct: 22 PMHILFIGYGKTSQRIAKHLFAQGHQITAV-SRHPKP 57
>gi|260072618|gb|ACX30517.1| formyltetrahydrofolate hydrolase [uncultured SUP05 cluster
bacterium]
Length = 283
Score = 36.4 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 59/162 (36%), Gaps = 14/162 (8%)
Query: 4 RVVFMGTSEFAVATLQALVSSSHS------IVSVYTQPPRPAGRRGLKSVLSAVHKKAQE 57
R++ MG+ + + L+ H IV V + + + S ++
Sbjct: 88 RILIMGSK--SSHCVADLLHRHHEKELEGEIVGVLSNHDKLSKL------ASWYDVHFKQ 139
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
S+ T + +FN DV V+ Y +IP + + N H S LP +
Sbjct: 140 VSINDSTKTADIASMTQAVSTFNPDVIVLARYMQIIPGDLCDKYSGKIINIHHSFLPSFV 199
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISS 159
GA P RA G G + +LD GP+ V +
Sbjct: 200 GANPYARAAERGVKLIGATCHYVTANLDEGPIIEQDVVRVDH 241
>gi|254479198|ref|ZP_05092545.1| phosphoribosylglycinamide formyltransferase [Carboxydibrachium
pacificum DSM 12653]
gi|214034861|gb|EEB75588.1| phosphoribosylglycinamide formyltransferase [Carboxydibrachium
pacificum DSM 12653]
Length = 207
Score = 36.4 bits (82), Expect = 5.4, Method: Composition-based stats.
Identities = 24/158 (15%), Positives = 52/158 (32%), Gaps = 33/158 (20%)
Query: 3 LRVVFM----GTSEFAVATLQALVSS------SHSIVSVYTQPPRPAGRRGLKSVLSAVH 52
+R++ M GT LQ+++ + I+ V + +
Sbjct: 1 MRLMVMASGNGTD------LQSIIDAIEAGYIKAQIIGVVS--DKKEAY---------AL 43
Query: 53 KKAQEFSLPALV------PTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFY 106
++A++ +PA +E S N D ++ + ++ + I+
Sbjct: 44 ERAKKHGIPAYCLPKKELKENFFKELLSLLESLNPDGIILAGFLTILSEEIVERFPNKII 103
Query: 107 NGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHL 144
N H SL+P + G + + G+ H
Sbjct: 104 NIHPSLIPAFCGKGFYGMRVHQAVYDYGVKYTGCTVHF 141
>gi|189242004|ref|XP_001807057.1| PREDICTED: hypothetical protein, partial [Tribolium castaneum]
Length = 765
Score = 36.4 bits (82), Expect = 5.4, Method: Composition-based stats.
Identities = 7/188 (3%), Positives = 24/188 (12%), Gaps = 6/188 (3%)
Query: 63 LVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPI 122
Y+ N D ++ + +W
Sbjct: 560 FWKRYWFNSWYDWNWYRNWDRFHSRYNWKWYGFNTRYNWNWVNFDFWSFNFRKWYWFYSG 619
Query: 123 QRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAM 182
N ++ + + + +
Sbjct: 620 YNWYWVNFNLWRFD-FWKWYGFNSWYDWNWYRHWDRFHSRYNWKWYRFNTGHNWYRIYFD 678
Query: 183 DKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNH-----IRALSPFPGAWL 237
+ + + A + W
Sbjct: 679 FWSFNFRKWYWFYSRYNWYRINFNFWSFDFRKWYWFYTWYNWYGVNFDFWAFDSWNWYWF 738
Query: 238 EMMIGNKH 245
+ +
Sbjct: 739 DSWSYGRW 746
>gi|329664412|ref|NP_001192645.1| NFX1-type zinc finger-containing protein 1 [Bos taurus]
gi|297482109|ref|XP_002692544.1| PREDICTED: regulator of nonsense transcripts 1-like [Bos taurus]
gi|296480971|gb|DAA23086.1| regulator of nonsense transcripts 1-like [Bos taurus]
Length = 1918
Score = 36.4 bits (82), Expect = 5.6, Method: Composition-based stats.
Identities = 27/264 (10%), Positives = 58/264 (21%), Gaps = 25/264 (9%)
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ LP + + + +R K H P
Sbjct: 1424 LKHGLPV---QCTTKCGSILDCGHPCPGSCHSCFEGRFHERCQQPCKRLLICSHKCQEPC 1480
Query: 116 W-----RGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPIS---SNINTAGLQ 167
R + + + + + + + +
Sbjct: 1481 TGECPPCQRICQNRCVHSQCKKKCGELCTPCMEPCIWRCRHYQCTRLCSEPCDRPPCYVP 1540
Query: 168 QELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR 227
+ C H + + + Q E + + + R ++
Sbjct: 1541 CTKLLACGHPCIGLCGEPCPKKCRVCHQEEVTQIFFGSEDEPDARFVQLEDCSHIFEVQA 1600
Query: 228 ALSPFPGAWLEM-------MIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGAV- 279
E+ I R L ++ + EV+ + + AV
Sbjct: 1601 LDRYMNEQGDEVAIRLKVCPICQVPIRKNLRYGTSLKQRLEEIEVVKEKILGSAGEIAVS 1660
Query: 280 --RIMRLQRAGGRVL---DIGDFL 298
R+ L G +L DFL
Sbjct: 1661 QERLTAL-LEGKNLLCQELPEDFL 1683
>gi|303276316|ref|XP_003057452.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461804|gb|EEH59097.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 648
Score = 36.4 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 18/238 (7%), Positives = 38/238 (15%), Gaps = 9/238 (3%)
Query: 53 KKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASL 112
+ A+ P V T E + + L +
Sbjct: 269 QWARANGAPWNVWTCRKAAEGGHLEVLKWARTNGCPWDEETCEEAAFGGHLEVL--QWAR 326
Query: 113 LPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSV 172
R + + + + N
Sbjct: 327 AKRCPWNHYTCQHAETRGHWEDKSEICAKVAKGGHLEVLQWARTNGCQWNEDTCTYAAEG 386
Query: 173 LCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPF 232
+ A + G +
Sbjct: 387 GHLEVLQWARANGAPWDEFTCRNAAAGGHLEVLQWARASDPPCPWDEWTCTLAAEFGHLE 446
Query: 233 PGAWLEMMIGNK------HERIKLLES-QLVEGEGKPGEVINPNFTIACSQGAVRIMR 283
W K + + G P EV + +A G + +++
Sbjct: 447 VLRWARASDPPCPWDKGTCMWAKDWDVLEWARANGAPEEVGDEACALAAGDGDLEVLQ 504
>gi|291401671|ref|XP_002717171.1| PREDICTED: UDP glucuronosyltransferase 2 family, polypeptide A3
[Oryctolagus cuniculus]
Length = 530
Score = 36.4 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 23/270 (8%), Positives = 55/270 (20%), Gaps = 18/270 (6%)
Query: 17 TLQALVSSSHSIVSVYTQPP-------RPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLG 69
L+AL H + V T P P+ + + + A++ +
Sbjct: 42 ILEALAERGHEVT-VLTHPHTLLIDHWNPSALKFEMVDVPFDKENAEKKNAEFQNLALNV 100
Query: 70 QEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAG 129
+ S +
Sbjct: 101 SPLLSPWKSVIKLSDFFSGLNDDFKLFCESVIYNQTLMKKLQETNYDVMLIDPVTPCGEL 160
Query: 130 DNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNN 189
E + + G + S + + + + +
Sbjct: 161 VAELLAVPFVITLRVSIGGNMERNCGKLPSPPSYVPVTMVGLTDKMTFLERVKNAMLLVV 220
Query: 190 LPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAW-------LEMMIG 242
Q + + + S+ R + + + +E + G
Sbjct: 221 FNFWIQDGDFHFWRQFYSEALGRPTTLCETLAKAEIWLIRTYWDFEFPRPYLPNIEFVGG 280
Query: 243 NKHERIKLLESQLVEGEGKPGEVINPNFTI 272
+ K L ++ E GE +
Sbjct: 281 LHCKPAKPLPKEMEEFVQSSGE---DGIVV 307
>gi|241679960|ref|XP_002411559.1| conserved hypothetical protein [Ixodes scapularis]
gi|215504288|gb|EEC13782.1| conserved hypothetical protein [Ixodes scapularis]
Length = 1851
Score = 36.4 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 25/206 (12%), Positives = 47/206 (22%), Gaps = 6/206 (2%)
Query: 78 SFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAI 137
+ V L+ L K + + L +M
Sbjct: 1114 QYQDPWQYVDDVWLMFDNAWLYNRKTSRVYRYCTKLSEEFE--QEIDPVMQSLGYCCGRK 1171
Query: 138 MKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIE 197
+ + +P + + + C + L + I
Sbjct: 1172 FVFQPQVLCCFGKQLCTIPRDAKYWSYQNRYTYCQKCFAEIPGDTVTLGDDPTQAQTTIR 1231
Query: 198 NGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLESQLVE 257
K E H + F W E + K + + +
Sbjct: 1232 KDQFVEMKNDHLELEPFVECLDCGRKLHQVCVLHFDNIWPEGFTCENCLKQKGKKRKENK 1291
Query: 258 GEGKPGEVINPNF-TIACSQGAVRIM 282
KPGEV + +AC+ V +
Sbjct: 1292 FTAKPGEV---SIRVVACTDKLVEVK 1314
>gi|92111129|gb|ABE73456.1| endonuclease/reverse transcriptase [Pan troglodytes]
Length = 1275
Score = 36.0 bits (81), Expect = 6.9, Method: Composition-based stats.
Identities = 8/198 (4%), Positives = 36/198 (18%), Gaps = 4/198 (2%)
Query: 44 LKSVLSAVHKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKL 103
K + + K A++ + +++ + S A + + + + +
Sbjct: 1063 KKKTNNPIKKWARDMNRHFSKEDIYAAKKHMKKCSSLAIREMQIKTTMRYHLTPVRMAII 1122
Query: 104 GFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINT 163
+ + + + + + +
Sbjct: 1123 QKSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVW----RFLRDLELEIPFDPAIPLLG 1178
Query: 164 AGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVH 223
S Q + +A
Sbjct: 1179 IYPNAYKSCCYKDTCTRMFIAALFTIAKSWNQPKCPTMIDWIKKMWHIYTMEYYAAIKND 1238
Query: 224 NHIRALSPFPGAWLEMMI 241
+ + + ++
Sbjct: 1239 EFMSFVGTWMKLETIILS 1256
>gi|255084421|ref|XP_002508785.1| predicted protein [Micromonas sp. RCC299]
gi|226524062|gb|ACO70043.1| predicted protein [Micromonas sp. RCC299]
Length = 566
Score = 36.0 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 15/221 (6%), Positives = 40/221 (18%), Gaps = 9/221 (4%)
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+ P + + +++ + +
Sbjct: 355 YGTPNYDRMAGNRICRQIPWTWDEERLAAWE---ESRTGFPWIDACMMQLKQEGWMHHLA 411
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
A A + + + Q V +
Sbjct: 412 RHAVACFLTRGDLFVHWEAGAAVFDRELVDADWALNNGNWMWLSCSCFFYQYFRVYGPVS 471
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ DK PQ+++ +P +
Sbjct: 472 FGKKYDKEGAYIRKYLPQLKDMPAKYIYEPWTAPI------EVQRKAGCVVGVDYPAPIV 525
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVINPNFTIACSQGA 278
+ + +K K+ + G G ++ G
Sbjct: 526 DHAVASKECIEKIAAAYNAHKNGTAGSIVAAGKKRKAGDGV 566
>gi|8777587|dbj|BAA97119.1| 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase
[Sphingomonas paucimobilis]
gi|19918969|dbj|BAB88744.1| 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase
[Sphingomonas paucimobilis]
Length = 315
Score = 36.0 bits (81), Expect = 7.3, Method: Composition-based stats.
Identities = 31/273 (11%), Positives = 65/273 (23%), Gaps = 10/273 (3%)
Query: 3 LRVVFMGTSEFAVATLQALVS-SSHSIVSVYT----QPPRPAGRRGLKSVLSAVHKKAQE 57
+R+ G F L L + IVS+ + Q A + G K + + + A
Sbjct: 1 MRIALAGAGAFGEKHLDGLKNIDGVEIVSIISRKAEQAAEVAAKYGAKHSGTDLSE-ALA 59
Query: 58 FSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+ + A + + + L
Sbjct: 60 RD-DVDAVILCTPTQMHAEQAIACMNAGKHVQVEIPLADSWADAEAVMKKSQETGLVCMV 118
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
G + +A + +D F RK + + L AH
Sbjct: 119 GHTRRFNPSHQYIHNKIVAGELAIQQMDVQTYFFRRKNMNAKGEPRSWTDHLLWHHAAHT 178
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ + + + Q + + + + P +
Sbjct: 179 VDLFAYQAGKIVQANAVQGPIHPELGIAMDMSIQLKSETGAICTLSLSFNNDGPLGTFFR 238
Query: 238 EMMIGNKHERIKLLESQLVEGEGKPGEVINPNF 270
+ LV G+ +P +V +
Sbjct: 239 YICDNGTWIARYD---DLVTGKEEPVDVSKVDV 268
>gi|145478267|ref|XP_001425156.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392225|emb|CAK57758.1| unnamed protein product [Paramecium tetraurelia]
Length = 1281
Score = 35.6 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 19/244 (7%), Positives = 47/244 (19%), Gaps = 17/244 (6%)
Query: 56 QEFSLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPR 115
+ + + + E + Q LN
Sbjct: 348 ENYQCSTICGDGVIVGEEQCEDGNQIQFDGCYNCLFQCQQECLNCQFGKCIECQIGYENI 407
Query: 116 WRGAAPIQRAIMAGDNETGIAI-MKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLC 174
+ NE ++ + +K I + + + L
Sbjct: 408 EFSCHESCSNSIITFNEFCDDGNLEPFDGCFNCNYSCDQKCEICNQGICSKCFDQGWELN 467
Query: 175 AHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPG 234
+Q + + + + ++P
Sbjct: 468 LSINKCITICGDQIVAGDEQCDDGNDLKNDGCYECQNECQKECLKCMQGICYECIAPHWI 527
Query: 235 AWLEMMIGNKHERIKLLESQ-----LVEGEGKPGEVIN-PNFTIA----------CSQGA 278
+ + + E + PG V++ N I C G
Sbjct: 528 LNNNVCFCETCQIVCQNECSSCIQGVCYECQSPGWVLDNNNLCIQECGEQCTQNICGDGI 587
Query: 279 VRIM 282
+ +
Sbjct: 588 LNPL 591
>gi|254566353|ref|XP_002490287.1| hypothetical protein [Pichia pastoris GS115]
gi|238030083|emb|CAY68006.1| hypothetical protein PAS_chr1-4_0173 [Pichia pastoris GS115]
gi|328350681|emb|CCA37081.1| Probable E3 ubiquitin-protein ligase ARI5 [Pichia pastoris CBS
7435]
Length = 505
Score = 35.6 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 10/219 (4%), Positives = 42/219 (19%), Gaps = 18/219 (8%)
Query: 52 HKKAQEFSLPALVPTKLGQEEYEQFLSFNADVAV------------------VVAYGLVI 93
+ +LP + + + + +
Sbjct: 236 KEYLDSHNLPIVTCPYSHSFCFACSYEDHDPIPCNIAKNWIRKSKDDSETANWIDINTKQ 295
Query: 94 PQRILNATKLGFYNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMR 153
+ + H + I + D +
Sbjct: 296 CPKCDAVIEKNGGCNHMTCKKCAYQFCWICLQDWPLHGTAYYNCSRYDASAIKEMHQKQQ 355
Query: 154 KVPISSNINTAGLQQELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRV 213
S + +S + + + ++ + Q + + ++
Sbjct: 356 TTKQSLKRYLHYYKFYISHELSAHQDNDLFRSIESRVQEMQQDLGISWIDCQFYRTAMKL 415
Query: 214 NFCRSAENVHNHIRALSPFPGAWLEMMIGNKHERIKLLE 252
++ ++ ++ N+ +E
Sbjct: 416 LIKSRKVLKWSYALLYYCEVNNYVYIVETNQSFLSNSIE 454
>gi|299820624|ref|ZP_07052514.1| phosphoribosylglycinamide formyltransferase [Listeria grayi DSM
20601]
gi|299818119|gb|EFI85353.1| phosphoribosylglycinamide formyltransferase [Listeria grayi DSM
20601]
Length = 191
Score = 35.6 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 63/158 (39%), Gaps = 26/158 (16%)
Query: 3 LRVVFMGTSEFAVATLQALVS----SSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
+++ + + QAL+ H I V RP V K+A++
Sbjct: 1 MKLAVFASGNGS--NFQALIDEATIRPH-IELVVC--DRPEAY---------VVKRAEQH 46
Query: 59 SLPALVPT--------KLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHA 110
++P + + + D V+ Y +I +L N H
Sbjct: 47 AIPVFTFSAKAFANKAAYENAILHELEKYAVDFVVLAGYMRLIGPTLLTKFLNRIINLHP 106
Query: 111 SLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGP 148
SLLP++ G IQ+A+ AG+ ETG+ +D+ +DTGP
Sbjct: 107 SLLPKFPGKDAIQQALDAGERETGVTAHFVDEGMDTGP 144
>gi|196015476|ref|XP_002117595.1| hypothetical protein TRIADDRAFT_61620 [Trichoplax adhaerens]
gi|190579917|gb|EDV20005.1| hypothetical protein TRIADDRAFT_61620 [Trichoplax adhaerens]
Length = 1024
Score = 35.6 bits (80), Expect = 8.8, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 70/180 (38%), Gaps = 25/180 (13%)
Query: 18 LQALVS----SSH--SIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQE 71
LQA++ + +V V + + AG ++A++ ++ +V
Sbjct: 829 LQAIIDYAKAEKYRIEVVLVISNVDKVAGL-----------ERARQNNIENIVIDHKRYT 877
Query: 72 EYEQFLSFNADV--------AVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRGAAPIQ 123
+QF V + + ++ +N K N H SLLP + G +
Sbjct: 878 TRKQFEKELDHVLKEKSVNLICLAGFMRILTIDFVNQWKGKIINTHPSLLPAFPGCGAVL 937
Query: 124 RAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHAMVEAMD 183
+A+ AG TG I ++ +D+GP+ VPI + + L Q + +A+D
Sbjct: 938 QALTAGVKITGCTIHFVEAKVDSGPIIVQESVPILPDDSETTLSQRIKTAEHRCYPQAID 997
>gi|313229717|emb|CBY18532.1| unnamed protein product [Oikopleura dioica]
Length = 1525
Score = 35.6 bits (80), Expect = 9.1, Method: Composition-based stats.
Identities = 18/156 (11%), Positives = 30/156 (19%), Gaps = 8/156 (5%)
Query: 108 GHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQ 167
H P + + + K+ TG + P +
Sbjct: 1075 NHKGWTPWTQWSRCTRSCGGGHQYRERSCTDGCQKNPRTGQYLSWHQEPRGCSRFPCPYG 1134
Query: 168 QELSVLCAHAMVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIR 227
Q + + + +
Sbjct: 1135 QRSTFGSYGPWGPCSKTCGRGMQ--------MSYQTCVSGACKNEPKSSYPYNQRPCTMS 1186
Query: 228 ALSPFPGAWLEMMIGNKHERIKLLESQLVEGEGKPG 263
P AW E N + L E + GKPG
Sbjct: 1187 QWCPAWNAWGEWSECNVNCGGGLKERKRTCSTGKPG 1222
>gi|254443716|ref|ZP_05057192.1| Formyl transferase, C-terminal domain protein [Verrucomicrobiae
bacterium DG1235]
gi|198258024|gb|EDY82332.1| Formyl transferase, C-terminal domain protein [Verrucomicrobiae
bacterium DG1235]
Length = 304
Score = 35.6 bits (80), Expect = 9.3, Method: Composition-based stats.
Identities = 54/296 (18%), Positives = 99/296 (33%), Gaps = 26/296 (8%)
Query: 3 LRVVFMGTSEFAVATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFS--- 59
++V + S A +L A++ S H +V + G+ G ++ V A
Sbjct: 1 MKVAILLNSSMANPSLSAII-SKHELVGI------GVGKTGGEN----VGLLADSIDAAG 49
Query: 60 --LPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWR 117
+ + E + +A+V +V + I Q L K GFYN H LP R
Sbjct: 50 APIYTFERSSHETEMSDWLRDSHAEVVLVYTFNFKIAQSCLAIPKYGFYNFHPGALPEER 109
Query: 118 GAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAGLQQELSVLCAHA 177
G +P+ AI + I KM +HLD GP+ + + + L +
Sbjct: 110 G-SPLFWAIRNRQRSFALTIHKMTEHLDCGPIYEREHCRLDDSTTFGEALEHLGTISRKF 168
Query: 178 MVEAMDKLEQNNLPLSPQIENGITYAEKISKGETRVNFCRSAENVHNHIRALSPFPGAWL 237
+ + +LE+ L +N + + + +
Sbjct: 169 TIRLLYELEKRKGHLRLSDQNAAMARFYRNPKRADIVVDWRRQTAEQVQALTNACNPFCE 228
Query: 238 EMMIGNKHERIKLLESQLV--------EGEGKPGEVINPNFTIACSQG-AVRIMRL 284
+ ++LE+ + + G P + + I C +RI L
Sbjct: 229 GAIAIIDGRETRILEASPIMLEQSIQGKASGVPLPQVEGDLCIVCLDNTVLRIDVL 284
>gi|282801704|gb|ADB02814.1| WekD [Escherichia coli]
Length = 271
Score = 35.6 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 48/149 (32%), Gaps = 20/149 (13%)
Query: 2 TLRVVFMGTSEFA---VATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEF 58
++VVF+G+ + L+++ + IV T+ P +
Sbjct: 7 KIKVVFLGSRPLGYETIRILESI--TCVEIVGCVTKAPS--------LNAWWIKD----- 51
Query: 59 SLPALVPTKLGQEEYEQFLSFNADVAVVVAYGLVIPQRILNATKLGFYNGHASLLPRWRG 118
P K Q S + D V + Y +IP I+ +GF N H S +RG
Sbjct: 52 --PYEYSMKYKQLSLADLESIDFDFGVSINYWNIIPDNIIKKPIMGFVNLHHSFNLCYRG 109
Query: 119 AAPIQRAIMAGDNETGIAIMKMDKHLDTG 147
AI + + G
Sbjct: 110 RDMTTYAIRDARKMNRWFHGTCLHYTNDG 138
>gi|149237482|ref|XP_001524618.1| hypothetical protein LELG_04590 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452153|gb|EDK46409.1| hypothetical protein LELG_04590 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 2618
Score = 35.6 bits (80), Expect = 9.8, Method: Composition-based stats.
Identities = 15/146 (10%), Positives = 34/146 (23%), Gaps = 11/146 (7%)
Query: 52 HKKAQEFSLPALVPTKLGQE------EYEQFLSFNADVAVVVAYGLVIPQRILNATKLGF 105
H A+E +L L + + L ++ + L +
Sbjct: 2459 HDLARENNLIVLDKNEHTPHSRPELQCHWMILQMRRTRLCWTRMNIIHSRPELQCHWMIL 2518
Query: 106 YNGHASLLPRWRGAAPIQRAIMAGDNETGIAIMKMDKHLDTGPVAFMRKVPISSNINTAG 165
+ + + I++M + +R +
Sbjct: 2519 QRR-----RTRLCWTRMNIIHSRPELQCHWMILQMRRTRLCWTRMNIRHSRPELQCHWMI 2573
Query: 166 LQQELSVLCAHAMVEAMDKLEQNNLP 191
LQ+ + L M + Q
Sbjct: 2574 LQRRRTRLYWTRMNIIHSRPGQQCHW 2599
>gi|291618340|ref|YP_003521082.1| YneA [Pantoea ananatis LMG 20103]
gi|291153370|gb|ADD77954.1| YneA [Pantoea ananatis LMG 20103]
Length = 326
Score = 35.6 bits (80), Expect = 9.9, Method: Composition-based stats.
Identities = 16/148 (10%), Positives = 39/148 (26%), Gaps = 15/148 (10%)
Query: 15 VATLQALVSSSHSIVSVYTQPPRPAGRRGLKSVLSAVHKKAQEFSLPALVPTKLGQEEYE 74
V ++ L++ I+ V P+ VL V ++A++ + + Q+
Sbjct: 70 VRAIEDLIAQKVDIIGVVPNDPK---------VLEPVLQRARDAGIKVITHESPSQKFAN 120
Query: 75 QFLSFNADVAVVVAYGLVIPQRILNATKLGFYNG------HASLLPRWRGAAPIQRAIMA 128
+ + + + + + Y G H M
Sbjct: 121 WDFELVDAATHGINHMKALAACMHDEGQYAMYVGSLTVPLHQQWTDAALAYQKQHYPKMQ 180
Query: 129 GDNETGIAIMKMDKHLDTGPVAFMRKVP 156
+ +D + T +
Sbjct: 181 LVTDKFGVGESLDDSIRTTNELMSKYPN 208
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.311 0.116 0.340
Lambda K H
0.267 0.0357 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,408,570,227
Number of Sequences: 14124377
Number of extensions: 136167909
Number of successful extensions: 321841
Number of sequences better than 10.0: 3549
Number of HSP's better than 10.0 without gapping: 2975
Number of HSP's successfully gapped in prelim test: 574
Number of HSP's that attempted gapping in prelim test: 310725
Number of HSP's gapped (non-prelim): 4016
length of query: 310
length of database: 4,842,793,630
effective HSP length: 138
effective length of query: 172
effective length of database: 2,893,629,604
effective search space: 497704291888
effective search space used: 497704291888
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 80 (35.6 bits)