HHsearch alignment for GI: 255764463 and conserved domain: cd04729
>cd04729 NanE N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate. This reaction is part of the pathway that allows the usage of sialic acid as a carbohydrate source. Sialic acids are a family of related sugars that are found as a component of glycoproteins, gangliosides, and other sialoglycoconjugates.
Probab=91.28 E-value=1 Score=26.06 Aligned_cols=172 Identities=23% Similarity=0.296 Sum_probs=97.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHH
Q ss_conf 88878632889999999999998889367633025633455445421576537999999999730144798613327100
Q gi|255764463|r 57 NSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFT 136 (337)
Q Consensus 57 ~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT 136 (337)
T Consensus 16 QA~~~ePl~~~~im~~mA~Aa~~gGA~giR~~~-------------------~--~dI~aIk~~v-~lPII--------- 64 (219)
T cd04729 16 QALPGEPLHSPEIMAAMALAAVQGGAVGIRANG-------------------V--EDIRAIRARV-DLPII--------- 64 (219)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECC-------------------H--HHHHHHHHCC-CCCEE---------
T ss_conf 189889968778999999999978963998089-------------------8--8999998328-99889---------
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCH---------HHHHHHHHHHCCCCCCCEECHHHHH
Q ss_conf 1143100136544628999999999999996289735246676779---------9999999987788577300336664
Q gi|255764463|r 137 IHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGR---------VQEIRKKLDSHGHINVGIMPYVAKF 207 (337)
Q Consensus 137 ~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGr---------V~aIR~~Ld~~g~~~~~ImsYsaKf 207 (337)
T Consensus 65 -----Gi~K~~~~~s~VyITPt~~ev~~l~~aGadiIA~DaT~R~RP~g~~l~~~i~~i~~~-----~-~~l~MAD---- 129 (219)
T cd04729 65 -----GLIKRDYPDSEVYITPTIEEVDALAAAGADIIALDATDRPRPDGETLAELIKRIHEE-----Y-NCLLMAD---- 129 (219)
T ss_pred -----EEEECCCCCCCEEECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHH-----H-CCEEEEE----
T ss_conf -----999568899984566889999999985999999946788798997899999999998-----6-9778875----
Q ss_pred HHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE----------ECCCHHHHHHHHHHHHHCC
Q ss_conf 354301016753102446777744315721147889888876640898799----------5531145899999996249
Q gi|255764463|r 208 NSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLL----------VKPGLPYLDVCFRIKEKFG 277 (337)
Q Consensus 208 aS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lM----------VKPa~~yLDii~~~k~~~~ 277 (337)
T Consensus 130 ----------------------------~st~ee~~~A~----~~G~D~vgTTL~GYT~~t~~~~~PD~~lv~~l~~~~~ 177 (219)
T cd04729 130 ----------------------------ISTLEEALNAA----KLGFDIIGTTLSGYTEETAKTEDPDFELLKELRKALG 177 (219)
T ss_pred ----------------------------CCCHHHHHHHH----HCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf ----------------------------48899999999----8499899702145677878899987899999999759
Q ss_pred CCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 989999346189999999988897889999999999977269999820
Q gi|255764463|r 278 LPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTY 325 (337)
Q Consensus 278 ~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY 325 (337)
T Consensus 178 ~pvIa---------------EGri~tPe~a~~a~----~~GA~aVVVG 206 (219)
T cd04729 178 IPVIA---------------EGRINSPEQAAKAL----ELGADAVVVG 206 (219)
T ss_pred CCEEE---------------ECCCCCHHHHHHHH----HCCCCEEEEC
T ss_conf 93997---------------06989999999999----8399899989