HHsearch alignment of GI: 255764463 and MMDB domain: 1ykw_A_145-435
>1ykw_A (A:145-435) Rubisco-like protein; beta-alpha-barrel, unknown function; 2.00A {Chlorobaculum tepidum}
Probab=96.01 E-value=0.041 Score=35.09 Aligned_cols=144 Identities=15% Similarity=0.137 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999999999628973524667677999999999877885773003366643543010167531024467777443
Q gi|255764463|r 153 ETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTY 232 (337)
Q Consensus 153 ~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sY 232 (337)
.|-+.+++++-.++..|+|+|- |.+++.|-+-+.+.-...-+ .+|++-+..-.|.|+-|
T Consensus 33 ls~~~~a~~~y~~~~GG~D~IK----------------DDE~l~~~~~~p~~eRv~~~-----~~ai~~a~~eTG~~~~y 91 (291)
T 1ykw_A 33 LSPGEFAEIAYQSWLGGLDIAK----------------DDEMLADVTWSSIEERAAHL-----GKARRKAEAETGEPKIY 91 (291)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEE----------------CCTTCSSBTTBCHHHHHHHH-----HHHHHHHHHHHSSCCEE
T ss_pred CCHHHHHHHHHHHHHCCCCCCC----------------CCCCCCCCCCCCHHHHHHHH-----HHHHHHHHHHHCCEEEE
T ss_conf 8978888999999861477001----------------77656698878499999999-----99999999975975589
Q ss_pred CCCCCHH-HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEE-CCHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 1572114-788988887664089879955311458999999962499899993-46189999999988897889999999
Q gi|255764463|r 233 YLDPANV-QEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQ-VSGEYAMIKAASLQGWINKNDAMMES 310 (337)
Q Consensus 233 Qmd~~n~-~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYq-VSGEYami~~a~~~g~~d~~~~~~E~ 310 (337)
-.|.... .|-++.+..=.+.||.++||-|...=++.++.+++...+|+.+=- .+|-|+-- ...| ++. .++-
T Consensus 92 a~NiT~~~~em~~ra~~a~~~Ga~~vmi~~~~~G~~al~~L~~~~~lpIhaHra~~ga~~r~---~~~G-is~--~vl~- 164 (291)
T 1ykw_A 92 LANITDEVDSLMEKHDVAVRNGANALLINALPVGLSAVRMLSNYTQVPLIGHFPFIASFSRM---EKYG-IHS--KVMT- 164 (291)
T ss_dssp EEECCCCGGGHHHHHHHHHHHTCCEEEEEHHHHCHHHHHHHHHHCSSCEEEECTTTHHHHCS---TTSE-ECH--HHHH-
T ss_pred ECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCC---CCCC-CCH--HHHH-
T ss_conf 60367768999999999998399789993676556999999875163300022101320257---7785-139--9999-
Q ss_pred HHHHHHHCCCEEEEC
Q ss_conf 999977269999820
Q gi|255764463|r 311 LLAFKRAGCDGIFTY 325 (337)
Q Consensus 311 l~~~kRAGAd~IitY 325 (337)
.-.+-||||.+++-
T Consensus 165 -kl~RLaGaD~ih~~ 178 (291)
T 1ykw_A 165 -KLQRLAGLDAVIMP 178 (291)
T ss_dssp -HHHHHHTCSEEEEE
T ss_pred -HHHHHCCCCEEEEC
T ss_conf -99998288735524