Query gi|255764463|ref|YP_003064765.2| delta-aminolevulinic acid dehydratase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 337
No_of_seqs 171 out of 1711
Neff 4.7
Searched_HMMs 33803
Date Wed Jun 1 12:47:13 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 255764463.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >1h7n_A 5-aminolaevulinic acid 100.0 0 0 1023.1 32.6 302 35-337 1-306 (307)
2 >1w5q_A Delta-aminolevulinic a 100.0 0 0 1023.1 31.0 301 36-337 1-303 (304)
3 >1pv8_A Delta-aminolevulinic a 100.0 0 0 1026.8 28.2 302 35-337 1-305 (305)
4 >1w1z_A Delta-aminolevulinic a 100.0 0 0 1023.6 29.3 297 36-335 1-297 (297)
5 >1l6s_A Porphobilinogen syntha 100.0 0 0 1010.0 28.7 296 36-335 1-296 (298)
6 >2qyg_A Ribulose bisphosphate 96.2 0.018 5.2E-07 37.5 6.7 143 153-324 33-177 (288)
7 >1ykw_A Rubisco-like protein; 96.0 0.041 1.2E-06 35.1 7.7 144 153-325 33-178 (291)
8 >2zvi_A 2,3-diketo-5-methylthi 96.0 0.065 1.9E-06 33.7 8.6 145 153-325 40-188 (299)
9 >3fk4_A Rubisco-like protein; 95.7 0.051 1.5E-06 34.5 7.2 137 153-325 32-180 (293)
10 >1o94_A Tmadh, trimethylamine 95.6 0.13 3.9E-06 31.7 9.0 128 151-282 144-296 (343)
11 >2oem_A 2,3-diketo-5-methylthi 95.1 0.13 4E-06 31.6 7.6 137 153-325 33-181 (294)
12 >2gou_A Oxidoreductase, FMN-bi 94.5 0.19 5.7E-06 30.5 7.2 32 246-277 265-298 (323)
13 >2d69_A Ribulose bisphosphate 94.5 0.26 7.8E-06 29.6 7.8 136 153-325 32-180 (297)
14 >1geh_A Ribulose-1,5-bisphosph 93.8 0.54 1.6E-05 27.5 8.4 109 153-282 32-144 (237)
15 >3c6c_A 3-keto-5-aminohexanoat 93.1 0.53 1.6E-05 27.6 7.3 93 29-128 9-102 (316)
16 >2h8z_A Xenobiotic reductase A 93.0 0.81 2.4E-05 26.3 11.9 30 247-276 266-297 (315)
17 >3chv_A Prokaryotic domain of 92.6 0.64 1.9E-05 27.0 7.1 80 42-128 8-87 (284)
18 >3bg3_A Pyruvate carboxylase, 92.5 0.44 1.3E-05 28.1 6.3 29 60-88 52-82 (398)
19 >3hgj_A Chromate reductase; TI 90.4 1.5 4.5E-05 24.5 13.1 33 246-278 303-337 (349)
20 >2ze3_A DFA0005; organic waste 89.4 1.8 5.4E-05 23.9 12.4 169 75-285 30-212 (233)
21 >1ydn_A Hydroxymethylglutaryl- 88.7 2 6E-05 23.6 7.6 25 63-87 21-45 (295)
22 >2ftp_A Hydroxymethylglutaryl- 87.4 1.8 5.3E-05 24.0 5.9 25 63-87 25-49 (302)
23 >1zlp_A PSR132, petal death pr 87.3 2.5 7.3E-05 23.1 12.7 165 74-287 52-235 (318)
24 >1ydo_A HMG-COA lyase; TIM-bar 85.5 2.4 7.1E-05 23.1 5.7 29 63-91 23-52 (307)
25 >3ewb_X 2-isopropylmalate synt 84.9 3.1 9.2E-05 22.4 6.0 31 62-92 21-52 (293)
26 >3ez4_A 3-methyl-2-oxobutanoat 84.2 0.92 2.7E-05 25.9 3.1 164 17-190 6-201 (269)
27 >1xky_A Dihydrodipicolinate sy 83.8 3.5 0.0001 22.0 5.9 171 62-289 27-201 (219)
28 >1gjw_A Maltodextrin glycosylt 83.5 3.7 0.00011 21.9 9.3 161 35-195 80-271 (433)
29 >3gka_A N-ethylmaleimide reduc 83.4 2.4 7.2E-05 23.1 5.0 160 67-276 160-333 (361)
30 >3ble_A Citramalate synthase f 83.4 1.4 4.1E-05 24.7 3.7 24 155-178 168-191 (337)
31 >2yr1_A 3-dehydroquinate dehyd 82.9 3.9 0.00011 21.7 9.3 172 65-286 29-209 (257)
32 >1o5k_A DHDPS, dihydrodipicoli 82.5 3.5 0.0001 22.0 5.5 120 63-210 28-151 (306)
33 >2r14_A Morphinone reductase; 82.0 4.2 0.00012 21.5 7.9 169 67-276 121-301 (333)
34 >1z41_A YQJM, probable NADH-de 81.3 4.4 0.00013 21.3 12.0 208 65-283 36-283 (338)
35 >2eq5_A 228AA long hypothetica 80.9 4.6 0.00014 21.2 6.4 95 184-281 1-100 (101)
36 >1vyr_A Pentaerythritol tetran 80.6 4.7 0.00014 21.2 9.5 168 67-276 118-298 (322)
37 >1xg4_A Probable methylisocitr 80.5 2.6 7.6E-05 22.9 4.2 198 74-320 30-259 (295)
38 >3kru_A NADH:flavin oxidoreduc 80.4 4.7 0.00014 21.1 8.2 213 65-283 34-283 (343)
39 >2hsa_B 12-oxophytodienoate re 80.1 4.9 0.00014 21.1 9.2 26 150-175 165-190 (402)
40 >3ler_A DHDPS, dihydrodipicoli 80.0 4.9 0.00014 21.0 5.9 82 64-173 24-107 (301)
41 >3e02_A Uncharacterized protei 79.6 4.1 0.00012 21.6 5.0 80 42-128 6-86 (311)
42 >1icp_A OPR1, 12-oxophytodieno 79.5 5.1 0.00015 20.9 6.0 166 68-277 167-348 (376)
43 >2ojp_A DHDPS, dihydrodipicoli 78.8 4.9 0.00014 21.0 5.2 125 59-211 13-141 (292)
44 >1wx0_A Transaldolase; structu 78.6 3.1 9E-05 22.4 4.1 46 158-204 120-173 (199)
45 >2vc6_A MOSA, dihydrodipicolin 78.4 5.5 0.00016 20.7 5.9 166 64-289 17-190 (236)
46 >1q7z_A 5-methyltetrahydrofola 78.2 5.5 0.00016 20.7 16.4 220 68-323 44-270 (294)
47 >2pgw_A Muconate cycloisomeras 77.3 5.8 0.00017 20.5 5.4 52 65-130 7-58 (87)
48 >3cpr_A Dihydrodipicolinate sy 77.3 5.9 0.00017 20.5 6.0 160 62-281 31-197 (221)
49 >1eh9_A Glycosyltrehalose treh 76.8 6 0.00018 20.4 10.8 171 66-240 33-259 (352)
50 >2ovl_A Putative racemase; str 76.5 6.1 0.00018 20.4 5.2 141 52-205 7-176 (246)
51 >3eeg_A 2-isopropylmalate synt 76.5 6.1 0.00018 20.4 5.6 38 153-190 148-193 (325)
52 >1oya_A OLD yellow enzyme; oxi 76.4 6.2 0.00018 20.4 7.6 37 96-132 168-204 (308)
53 >3lot_A Uncharacterized protei 76.0 6.3 0.00019 20.3 6.8 78 42-126 6-84 (314)
54 >1wdd_A Ribulose bisphosphate 76.0 6.3 0.00019 20.3 7.4 110 153-283 33-147 (260)
55 >3fkr_A L-2-keto-3-deoxyarabon 75.2 6.6 0.0002 20.1 6.6 84 63-174 24-108 (309)
56 >2pmq_A Mandelate racemase/muc 75.1 6.5 0.00019 20.2 5.0 140 51-203 4-170 (232)
57 >1xxx_A DHDPS, dihydrodipicoli 75.0 6.7 0.0002 20.1 5.7 183 64-326 31-217 (219)
58 >1tx2_A DHPS, dihydropteroate 74.8 6.8 0.0002 20.1 8.7 215 52-273 42-292 (297)
59 >1eix_A Orotidine 5'-monophosp 74.7 6.8 0.0002 20.0 7.2 181 109-324 25-220 (245)
60 >3czg_A Sucrose hydrolase; (al 74.3 7 0.00021 20.0 8.9 109 63-175 101-245 (569)
61 >3ih1_A Methylisocitrate lyase 73.4 7.3 0.00022 19.9 5.5 187 74-326 42-244 (270)
62 >2v9d_A YAGE; dihydrodipicolin 72.9 7.5 0.00022 19.8 5.7 149 62-270 46-202 (278)
63 >3hbl_A Pyruvate carboxylase; 72.5 7.7 0.00023 19.7 8.7 44 42-87 37-80 (389)
64 >3e49_A Uncharacterized protei 72.2 7.8 0.00023 19.7 5.6 79 42-127 6-85 (311)
65 >1nvm_A HOA, 4-hydroxy-2-oxova 71.9 7.9 0.00023 19.6 5.9 32 62-93 24-56 (273)
66 >3i6e_A Muconate cycloisomeras 71.5 8.1 0.00024 19.6 5.0 67 51-130 4-70 (233)
67 >2pz0_A Glycerophosphoryl dies 71.4 8.1 0.00024 19.5 6.9 130 172-336 120-250 (252)
68 >1muw_A Xylose isomerase; atom 71.4 1 3.1E-05 25.6 0.2 74 24-97 72-145 (386)
69 >2r91_A 2-keto-3-deoxy-(6-phos 70.3 7.9 0.00023 19.6 4.5 130 64-227 15-151 (286)
70 >1qtw_A Endonuclease IV; DNA r 69.7 8.8 0.00026 19.3 6.0 93 69-174 13-107 (285)
71 >2ehh_A DHDPS, dihydrodipicoli 69.0 9.1 0.00027 19.2 6.0 167 64-289 17-190 (294)
72 >1bxb_A Xylose isomerase; xylo 68.9 1.5 4.4E-05 24.6 0.5 179 24-203 72-287 (387)
73 >1rqb_A Transcarboxylase 5S su 68.7 9.2 0.00027 19.2 9.9 215 59-311 108-342 (359)
74 >3kto_A Response regulator rec 68.2 5.6 0.00017 20.6 3.4 74 229-302 28-105 (136)
75 >2bmb_A Folic acid synthesis p 68.1 9.5 0.00028 19.1 4.6 203 60-270 17-311 (321)
76 >2yxg_A DHDPS, dihydrodipicoli 67.8 9.6 0.00029 19.0 6.3 112 65-207 18-136 (289)
77 >1l6w_A Fructose-6-phosphate a 67.7 6.1 0.00018 20.4 3.5 46 158-204 113-166 (196)
78 >2r8w_A AGR_C_1641P; APC7498, 66.8 10 0.0003 18.9 5.9 121 64-212 51-175 (280)
79 >2nuw_A 2-keto-3-deoxygluconat 66.7 10 0.0003 18.9 7.5 122 61-216 13-142 (288)
80 >2hjp_A Phosphonopyruvate hydr 66.6 10 0.0003 18.9 9.4 163 76-286 30-212 (262)
81 >2qdd_A Mandelate racemase/muc 66.6 10 0.0003 18.9 4.7 138 52-203 5-168 (230)
82 >1vpx_A Protein (transaldolase 66.3 7.1 0.00021 19.9 3.6 44 159-203 124-175 (206)
83 >1ua7_A Alpha-amylase; beta-al 65.6 11 0.00031 18.8 5.8 116 58-175 7-172 (344)
84 >2cw6_A Hydroxymethylglutaryl- 65.5 11 0.00032 18.7 6.9 25 63-87 22-46 (298)
85 >2z6i_A Trans-2-enoyl-ACP redu 65.2 11 0.00032 18.7 5.1 42 241-282 118-167 (246)
86 >3eb2_A Putative dihydrodipico 64.6 11 0.00033 18.6 6.5 85 62-174 19-104 (245)
87 >1lt8_A Betaine-homocysteine m 64.3 11 0.00033 18.6 7.2 217 67-322 53-296 (406)
88 >1q7z_A 5-methyltetrahydrofola 63.7 11 0.00034 18.5 8.0 200 61-276 39-261 (272)
89 >1xla_A D-xylose isomerase; is 63.5 2.4 7.2E-05 23.1 0.8 69 25-93 73-141 (394)
90 >2qiw_A PEP phosphonomutase; N 62.4 12 0.00036 18.4 5.8 49 238-287 166-214 (255)
91 >2poz_A Putative dehydratase; 61.9 12 0.00036 18.3 6.7 129 65-193 21-182 (254)
92 >2e1d_A Transaldolase; pentose 61.9 12 0.00035 18.5 4.0 62 153-215 163-248 (331)
93 >2gdq_A YITF; mandelate racema 61.8 12 0.00037 18.3 4.6 126 65-204 23-179 (239)
94 >2wkj_A N-acetylneuraminate ly 61.7 12 0.00037 18.3 5.8 28 64-91 28-55 (218)
95 >1igw_A Isocitrate lyase; beta 61.3 13 0.00037 18.2 9.6 28 66-93 164-191 (434)
96 >3fa4_A 2,3-dimethylmalate lya 61.2 13 0.00038 18.2 11.6 164 74-287 31-217 (241)
97 >1f8m_A Isocitrate lyase, ICL; 61.1 13 0.00038 18.2 9.4 51 238-289 265-319 (429)
98 >1jae_A Alpha-amylase; glycosi 60.8 13 0.00038 18.2 9.6 121 61-181 15-190 (362)
99 >1ps9_A 2,4-dienoyl-COA reduct 60.6 13 0.00038 18.2 9.2 43 240-282 228-285 (333)
100 >3flu_A DHDPS, dihydrodipicoli 60.4 13 0.00039 18.1 6.0 117 61-208 21-144 (297)
101 >2qgy_A Enolase from the envir 60.3 13 0.00039 18.1 4.8 132 59-203 15-175 (233)
102 >3h12_A Mandelate racemase; st 60.2 13 0.00039 18.1 5.3 136 55-204 10-175 (218)
103 >1qap_A Quinolinic acid phosph 59.9 13 0.00039 18.1 8.1 66 234-324 71-137 (143)
104 >3b4u_A Dihydrodipicolinate sy 59.7 13 0.0004 18.1 9.0 187 62-326 18-213 (228)
105 >3ks6_A Glycerophosphoryl dies 59.5 14 0.0004 18.0 12.0 196 100-336 10-210 (217)
106 >3ixl_A Amdase, arylmalonate d 59.3 13 0.0004 18.1 4.0 81 181-282 13-94 (95)
107 >3fv9_G Mandelate racemase/muc 58.0 8.9 0.00026 19.3 2.9 67 54-129 5-72 (239)
108 >3e96_A Dihydrodipicolinate sy 57.7 14 0.00043 17.8 5.7 166 63-288 28-197 (217)
109 >3d0c_A Dihydrodipicolinate sy 57.6 15 0.00043 17.8 6.2 169 63-289 28-198 (217)
110 >1gte_A Dihydropyrimidine dehy 57.5 13 0.00038 18.2 3.6 61 66-126 124-186 (280)
111 >3lb0_A 3-dehydroquinate dehyd 57.2 15 0.00044 17.8 9.8 185 47-285 34-229 (276)
112 >2oz8_A MLL7089 protein; struc 57.2 15 0.00044 17.8 6.1 166 61-299 16-187 (221)
113 >3faw_A Reticulocyte binding p 57.1 15 0.00044 17.8 6.3 136 39-192 13-184 (340)
114 >1xim_A D-xylose isomerase; is 57.1 2.6 7.8E-05 22.9 0.0 74 24-97 72-145 (393)
115 >2b7n_A Probable nicotinate-nu 56.7 15 0.00045 17.7 4.9 66 235-324 72-140 (145)
116 >1w3i_A EDA, 2-keto-3-deoxy gl 56.3 15 0.00045 17.7 6.0 133 62-229 14-154 (293)
117 >2oog_A Glycerophosphoryl dies 56.3 15 0.00045 17.7 4.9 84 232-336 197-280 (287)
118 >3daq_A DHDPS, dihydrodipicoli 56.2 15 0.00045 17.7 5.6 182 64-326 19-208 (229)
119 >1a0c_A Xylose isomerase; keto 56.1 4.8 0.00014 21.1 1.3 102 69-174 81-185 (438)
120 >1f6k_A N-acetylneuraminate ly 55.8 16 0.00046 17.6 5.5 112 64-206 20-139 (293)
121 >2qq6_A Mandelate racemase/muc 55.3 16 0.00047 17.6 7.5 90 42-131 9-105 (269)
122 >3eul_A Possible nitrate/nitri 55.2 16 0.00047 17.6 6.5 94 236-334 47-147 (152)
123 >2zc8_A N-acylamino acid racem 55.1 16 0.00047 17.6 4.4 136 52-203 5-168 (225)
124 >3dz1_A Dihydrodipicolinate sy 54.4 16 0.00048 17.5 6.2 119 61-208 22-145 (313)
125 >1to3_A Putative aldolase YIHT 53.9 17 0.00049 17.4 8.8 199 56-324 33-253 (304)
126 >2rfg_A Dihydrodipicolinate sy 53.8 17 0.00049 17.4 6.5 81 65-173 18-99 (243)
127 >1aj0_A DHPS, dihydropteroate 53.6 17 0.0005 17.4 7.0 207 61-274 31-274 (282)
128 >1srr_A SPO0F, sporulation res 53.5 17 0.0005 17.4 6.5 71 229-302 25-100 (124)
129 >2ogi_A Hypothetical protein S 53.0 9.6 0.00028 19.1 2.4 78 141-218 55-147 (159)
130 >3dip_A Enolase; structural ge 52.8 17 0.00051 17.3 4.1 162 64-282 44-211 (278)
131 >1m3u_A 3-methyl-2-oxobutanoat 52.5 18 0.00052 17.3 11.8 39 151-189 156-194 (264)
132 >3eq2_A Probable two-component 52.4 18 0.00052 17.3 6.2 70 230-302 28-102 (167)
133 >2zbt_A Pyridoxal biosynthesis 52.3 18 0.00052 17.3 4.4 72 70-145 30-107 (297)
134 >2qw5_A Xylose isomerase-like 51.7 18 0.00053 17.2 5.4 21 69-89 32-52 (335)
135 >2rdx_A Mandelate racemase/muc 51.6 18 0.00053 17.2 4.5 64 53-130 4-68 (227)
136 >1vzw_A Phosphoribosyl isomera 50.6 19 0.00055 17.1 4.9 71 238-324 144-221 (244)
137 >1jpd_X L-Ala-D/L-Glu epimeras 49.3 20 0.00058 17.0 6.4 63 52-130 5-67 (211)
138 >2oqh_A Putative isomerase; PS 49.3 20 0.00058 16.9 5.1 64 53-130 2-68 (96)
139 >2wmm_A Chromosome partition p 48.9 6.9 0.0002 20.0 1.1 23 195-219 21-43 (107)
140 >3igx_A Transaldolase; TAla, I 48.6 20 0.00059 16.9 3.8 23 153-175 161-183 (324)
141 >3cwn_A Transaldolase B; direc 48.5 20 0.00059 16.9 4.7 162 24-205 14-247 (337)
142 >2ps2_A Putative mandelate rac 48.5 19 0.00057 17.0 3.3 65 52-130 5-70 (236)
143 >3cz5_A Two-component response 48.2 20 0.0006 16.8 7.2 92 235-334 36-137 (153)
144 >3bo9_A Putative nitroalkan di 47.4 21 0.00062 16.8 4.9 37 246-282 137-181 (248)
145 >3c3w_A Two component transcri 47.0 21 0.00063 16.7 5.4 78 236-317 33-114 (129)
146 >1g94_A Alpha-amylase; beta-al 47.0 21 0.00063 16.7 9.9 115 62-193 8-134 (277)
147 >2qzj_A Two-component response 46.3 22 0.00064 16.6 4.0 71 229-302 26-100 (136)
148 >1oy0_A Ketopantoate hydroxyme 45.7 22 0.00066 16.6 6.5 173 74-285 47-222 (234)
149 >3igs_A N-acetylmannosamine-6- 45.5 22 0.00066 16.6 7.0 62 243-323 139-208 (213)
150 >3ibp_A Chromosome partition p 45.2 7.2 0.00021 19.9 0.7 23 195-219 23-45 (109)
151 >2vef_A Dihydropteroate syntha 44.9 23 0.00067 16.5 5.3 60 64-129 29-91 (314)
152 >1r7a_A Sucrose phosphorylase; 44.2 23 0.00069 16.4 7.5 146 60-222 11-182 (219)
153 >2oqr_A Sensory transduction p 43.6 24 0.00071 16.4 4.8 72 229-303 26-101 (101)
154 >3hjz_A Transaldolase B; parac 43.6 24 0.00071 16.4 4.4 107 103-215 106-244 (334)
155 >2dgd_A 223AA long hypothetica 43.5 24 0.0007 16.4 3.2 80 181-281 13-93 (95)
156 >1tkk_A Similar to chloromucon 43.0 24 0.00072 16.3 5.0 66 52-130 5-71 (245)
157 >3b2n_A Uncharacterized protei 43.0 24 0.00072 16.3 6.7 65 235-302 34-102 (133)
158 >2hmc_A AGR_L_411P, dihydrodip 42.9 24 0.00072 16.3 6.3 181 64-326 43-233 (235)
159 >1mdl_A Mandelate racemase; is 42.7 25 0.00073 16.3 4.4 137 53-203 5-171 (233)
160 >3eoo_A Methylisocitrate lyase 42.6 25 0.00073 16.3 13.6 161 75-285 36-215 (282)
161 >2o7s_A DHQ-SDH, bifunctional 42.6 25 0.00073 16.3 7.2 164 65-285 14-182 (219)
162 >2bhu_A Maltooligosyltrehalose 42.0 25 0.00075 16.2 11.2 133 66-200 26-190 (355)
163 >1iv8_A Maltooligosyl trehalos 42.0 25 0.00075 16.2 6.7 106 65-175 14-178 (291)
164 >3h5d_A DHDPS, dihydrodipicoli 42.0 25 0.00075 16.2 5.3 154 63-276 23-184 (214)
165 >3eez_A Putative mandelate rac 41.8 25 0.00075 16.2 5.6 136 51-200 4-165 (230)
166 >1w4t_A Arylamine N-acetyltran 40.7 26 0.00078 16.1 3.2 58 165-222 8-79 (145)
167 >1sjd_A N-acylamino acid racem 40.3 27 0.00079 16.0 6.0 134 54-204 7-170 (225)
168 >2jbm_A Nicotinate-nucleotide 39.4 28 0.00082 15.9 4.1 61 244-324 45-108 (113)
169 >3k13_A 5-methyltetrahydrofola 39.2 28 0.00082 15.9 9.2 187 64-262 33-256 (300)
170 >2hqr_A Putative transcription 39.2 28 0.00082 15.9 5.5 72 228-302 21-93 (99)
171 >2hzg_A Mandelate racemase/muc 38.9 28 0.00083 15.9 6.6 69 52-130 4-74 (222)
172 >1dqu_A Isocitrate lyase; beta 38.5 28 0.00084 15.9 8.9 193 55-289 60-280 (390)
173 >1ji1_A Alpha-amylase I; beta/ 38.3 28 0.00081 16.0 2.8 68 66-133 23-100 (384)
174 >2gas_A Isoflavone reductase; 38.3 29 0.00085 15.8 3.1 101 203-304 3-117 (163)
175 >1dbt_A Orotidine 5'-phosphate 37.9 29 0.00086 15.8 7.0 180 110-324 15-213 (239)
176 >3bc9_A AMYB, alpha amylase, c 37.7 29 0.00087 15.8 11.2 125 58-201 24-171 (298)
177 >2qde_A Mandelate racemase/muc 37.5 29 0.00087 15.8 4.7 65 52-130 5-70 (238)
178 >3gdm_A Orotidine 5'-phosphate 37.3 30 0.00088 15.7 3.9 89 112-201 43-148 (267)
179 >1dbw_A Transcriptional regula 37.0 30 0.00089 15.7 4.3 70 230-302 26-100 (126)
180 >1s8n_A Putative antiterminato 37.0 26 0.00078 16.1 2.6 68 232-302 38-110 (143)
181 >3fem_A Pyridoxine biosynthesi 37.0 30 0.00089 15.7 5.0 183 71-264 27-239 (297)
182 >3eod_A Protein HNR; response 36.7 30 0.0009 15.7 3.6 72 229-302 29-104 (130)
183 >3ik4_A Mandelate racemase/muc 36.6 30 0.0009 15.7 5.0 52 66-130 8-59 (164)
184 >2qxy_A Response regulator; re 36.3 31 0.00091 15.6 5.0 71 229-302 26-100 (142)
185 >2zsk_A PH1733, 226AA long hyp 36.2 31 0.00091 15.6 3.3 38 152-189 56-94 (115)
186 >1f6y_A 5-methyltetrahydrofola 36.2 31 0.00091 15.6 6.4 187 64-265 21-236 (262)
187 >1twd_A Copper homeostasis pro 36.1 31 0.00092 15.6 6.2 116 56-189 58-190 (256)
188 >2qjg_A Putative aldolase MJ04 35.8 31 0.00093 15.6 6.7 30 68-97 45-74 (273)
189 >3f6c_A Positive transcription 35.7 31 0.00093 15.6 2.9 69 231-302 25-99 (134)
190 >2zic_A Dextran glucosidase; T 35.7 31 0.00093 15.6 5.8 69 64-132 27-101 (292)
191 >3jte_A Response regulator rec 35.3 32 0.00094 15.5 6.3 74 229-302 25-102 (143)
192 >1vqt_A Orotidine 5'-phosphate 35.0 32 0.00095 15.5 4.1 57 112-189 49-106 (213)
193 >1qho_A Alpha-amylase; glycosi 34.6 33 0.00096 15.5 10.6 119 58-193 42-177 (333)
194 >1mxg_A Alpha amylase; hyperth 34.6 33 0.00097 15.5 6.6 139 38-194 9-181 (279)
195 >2nq5_A 5-methyltetrahydropter 34.4 28 0.00083 15.9 2.4 67 107-175 107-175 (341)
196 >2qkf_A 3-deoxy-D-manno-octulo 34.4 28 0.00083 15.9 2.4 66 260-325 172-252 (280)
197 >1yrr_A N-acetylglucosamine-6- 34.3 33 0.00098 15.4 6.9 131 152-300 17-154 (222)
198 >1y0e_A Putative N-acetylmanno 33.7 34 0.001 15.4 7.6 63 243-324 129-203 (207)
199 >1s2w_A Phosphoenolpyruvate ph 33.4 34 0.001 15.3 8.8 166 76-289 34-221 (265)
200 >3l0g_A Nicotinate-nucleotide 32.9 35 0.001 15.3 5.9 72 228-324 64-136 (142)
201 >3dmp_A Uracil phosphoribosylt 32.8 35 0.001 15.3 3.5 59 67-140 142-200 (217)
202 >1u1j_A 5-methyltetrahydropter 32.7 35 0.001 15.3 7.0 137 56-200 56-206 (275)
203 >3cq0_A Putative transaldolase 31.8 28 0.00082 15.9 2.0 98 154-275 169-267 (339)
204 >2o55_A Putative glycerophosph 31.7 36 0.0011 15.1 7.3 130 180-336 125-255 (258)
205 >3gd6_A Muconate cycloisomeras 31.7 6.9 0.0002 20.0 -1.1 126 65-204 11-166 (167)
206 >3fok_A Uncharacterized protei 31.3 33 0.00096 15.5 2.3 105 146-255 190-300 (307)
207 >3hcn_A Ferrochelatase, mitoch 31.3 37 0.0011 15.1 6.6 87 63-171 99-187 (216)
208 >1cyg_A Cyclodextrin glucanotr 31.2 37 0.0011 15.1 10.7 121 56-194 40-182 (335)
209 >1yio_A Response regulatory pr 31.0 34 0.001 15.4 2.3 71 229-302 26-101 (143)
210 >1t7l_A 5-methyltetrahydropter 30.9 37 0.0011 15.1 4.1 66 107-174 149-216 (375)
211 >1b43_A Protein (FEN-1); nucle 30.8 38 0.0011 15.0 3.6 43 59-101 50-92 (263)
212 >1bwv_A Rubisco, protein (ribu 30.3 38 0.0011 15.0 7.8 107 153-280 32-142 (265)
213 >2vp8_A Dihydropteroate syntha 30.1 39 0.0011 15.0 4.6 108 61-175 58-166 (318)
214 >3kcn_A Adenylate cyclase homo 29.4 40 0.0012 14.9 5.5 72 229-302 25-102 (151)
215 >1xqi_A Nucleoside diphosphate 29.4 18 0.00052 17.3 0.6 126 172-311 21-148 (195)
216 >3cmq_A Phenylalanyl-tRNA synt 29.2 31 0.00092 15.6 1.9 22 183-204 18-41 (271)
217 >3js3_A 3-dehydroquinate dehyd 29.2 40 0.0012 14.9 12.3 171 65-286 29-210 (258)
218 >2ze0_A Alpha-glucosidase; TIM 29.1 40 0.0012 14.9 8.8 91 65-173 28-125 (484)
219 >1lvm_A Catalytic domain of th 29.0 17 0.0005 17.4 0.5 15 135-149 48-66 (124)
220 >3i4k_A Muconate lactonizing e 28.8 40 0.0012 14.8 4.9 68 50-130 3-72 (230)
221 >1zh2_A KDP operon transcripti 28.7 41 0.0012 14.8 3.5 70 230-302 24-97 (121)
222 >3go2_A Putative L-alanine-DL- 28.7 41 0.0012 14.8 6.6 161 42-203 9-208 (270)
223 >1zfj_A Inosine monophosphate 28.7 41 0.0012 14.8 7.3 75 109-183 139-229 (370)
224 >2r25_B Osmosensing histidine 28.6 41 0.0012 14.8 7.6 72 231-302 26-106 (133)
225 >3d23_B 3C-like proteinase; ma 28.0 10 0.0003 18.9 -0.8 12 207-218 179-190 (190)
226 >3eww_A Ompdecase, orotidine-5 27.9 42 0.0012 14.7 2.6 96 110-206 43-154 (260)
227 >1u83_A Phosphosulfolactate sy 27.2 40 0.0012 14.8 2.2 66 166-261 120-193 (276)
228 >2izo_A FEN1, flap structure-s 27.1 25 0.00074 16.2 1.1 40 59-98 47-86 (254)
229 >2w00_A HSDR, R.ECOR124I; ATP- 27.0 41 0.0012 14.8 2.2 17 264-280 26-42 (69)
230 >2e8y_A AMYX protein, pullulan 26.9 44 0.0013 14.6 4.0 153 39-193 10-221 (414)
231 >2dqw_A Dihydropteroate syntha 26.6 44 0.0013 14.6 6.8 201 63-274 47-284 (294)
232 >1ub3_A Aldolase protein; schi 26.6 44 0.0013 14.6 6.9 22 66-87 17-38 (220)
233 >3bh7_B Protein XRP2; protein- 26.4 44 0.0013 14.5 4.4 50 172-221 28-79 (139)
234 >3kp1_A D-ornithine aminomutas 26.4 45 0.0013 14.5 2.9 15 160-174 30-44 (393)
235 >2cho_A Glucosaminidase, hexos 26.4 45 0.0013 14.5 4.7 95 24-138 60-159 (286)
236 >2qgq_A Protein TM_1862; alpha 26.3 45 0.0013 14.5 4.4 66 56-126 23-89 (112)
237 >1o60_A 2-dehydro-3-deoxyphosp 26.2 45 0.0013 14.5 2.4 133 66-207 34-172 (292)
238 >3dzd_A Transcriptional regula 25.8 33 0.00097 15.4 1.5 71 229-302 22-97 (128)
239 >2pge_A MENC; OSBS, NYSGXRC, P 25.7 46 0.0014 14.5 5.1 65 53-130 7-73 (235)
240 >2p10_A MLL9387 protein; NP_08 25.4 43 0.0013 14.6 2.1 199 15-281 9-210 (261)
241 >2z1k_A (NEO)pullulanase; hydr 25.0 47 0.0014 14.4 4.0 111 63-175 45-201 (394)
242 >2npn_A Putative cobalamin syn 25.0 44 0.0013 14.6 2.1 60 104-183 13-72 (142)
243 >3g1v_A Orotidine 5'-phosphate 25.0 47 0.0014 14.4 8.3 93 110-203 24-126 (228)
244 >3h5i_A Response regulator/sen 24.9 28 0.00084 15.9 1.0 71 230-302 28-103 (140)
245 >2qsj_A DNA-binding response r 24.9 47 0.0014 14.4 2.8 70 231-302 29-103 (154)
246 >2ozt_A TLR1174 protein; struc 24.9 47 0.0014 14.4 4.5 54 65-131 11-65 (170)
247 >1xrs_A D-lysine 5,6-aminomuta 24.8 48 0.0014 14.4 3.1 107 102-220 115-249 (516)
248 >1wv2_A Thiazole moeity, thiaz 24.8 48 0.0014 14.3 4.6 37 246-282 149-192 (265)
249 >1ehw_A NDPK H4, nucleoside di 24.5 30 0.00089 15.7 1.1 46 172-217 30-77 (162)
250 >3ddm_A Putative mandelate rac 24.4 48 0.0014 14.3 2.4 51 66-130 17-68 (229)
251 >2zad_A Muconate cycloisomeras 24.2 49 0.0014 14.3 5.5 56 61-130 14-69 (225)
252 >1lbq_A Ferrochelatase; rossma 24.2 40 0.0012 14.9 1.7 39 63-101 104-142 (169)
253 >2otd_A Glycerophosphodiester 24.2 49 0.0014 14.3 4.0 71 245-336 176-246 (247)
254 >2h1v_A Ferrochelatase; rossma 23.7 47 0.0014 14.4 2.0 37 63-99 86-122 (168)
255 >1qpo_A Quinolinate acid phosp 23.6 50 0.0015 14.2 6.3 62 243-324 75-139 (145)
256 >1j36_A ANCE, angiotensin conv 23.5 23 0.00068 16.5 0.4 209 64-336 23-268 (278)
257 >3cyv_A URO-D, UPD, uroporphyr 23.5 50 0.0015 14.2 4.9 179 108-324 122-324 (354)
258 >1qkk_A DCTD, C4-dicarboxylate 23.4 51 0.0015 14.2 4.7 71 229-302 25-100 (155)
259 >1oao_C CODH, carbon monoxide 23.4 51 0.0015 14.2 6.5 133 50-198 120-277 (324)
260 >2rb4_A ATP-dependent RNA heli 23.3 51 0.0015 14.2 4.2 99 62-174 39-140 (175)
261 >1o4u_A Type II quinolic acid 23.2 51 0.0015 14.1 4.1 63 242-324 43-108 (113)
262 >2o56_A Putative mandelate rac 22.8 52 0.0015 14.1 6.9 67 64-130 29-101 (259)
263 >2qul_A D-tagatose 3-epimerase 22.7 51 0.0015 14.1 2.0 95 59-175 11-107 (290)
264 >3i10_A Putative glycerophosph 22.7 52 0.0015 14.1 3.5 209 100-336 25-234 (239)
265 >2v5c_A O-GLCNACASE NAGJ; glyc 22.5 52 0.0016 14.1 4.7 88 24-123 59-146 (256)
266 >2v5d_A O-GLCNACASE NAGJ; fami 22.3 53 0.0016 14.0 4.4 88 24-123 59-146 (292)
267 >1g5a_A Amylosucrase; glycosyl 22.2 53 0.0016 14.0 10.2 130 58-187 103-263 (414)
268 >2k4m_A TR8_protein, UPF0146 p 22.2 53 0.0016 14.0 3.5 37 238-274 21-57 (153)
269 >2og9_A Mandelate racemase/muc 21.8 54 0.0016 14.0 5.9 135 57-205 13-177 (225)
270 >1a04_A Nitrate/nitrite respon 21.8 54 0.0016 14.0 3.8 68 232-302 32-104 (128)
271 >1b73_A Glutamate racemase; is 21.6 55 0.0016 13.9 6.0 76 184-259 2-83 (119)
272 >3cny_A Inositol catabolism pr 21.6 55 0.0016 13.9 3.1 144 69-213 32-200 (301)
273 >1k44_A Nucleoside diphosphate 21.5 37 0.0011 15.1 1.1 46 172-217 8-55 (136)
274 >2okt_A OSB synthetase, O-succ 21.5 20 0.00059 16.9 -0.3 119 68-203 6-149 (152)
275 >1aq0_A 1,3-1,4-beta-glucanase 21.0 42 0.0012 14.7 1.2 59 176-234 204-275 (284)
276 >3ffj_A Glycosyl hydrolase (fa 20.7 57 0.0017 13.8 9.8 140 64-205 14-192 (273)
277 >2wqp_A Polysialic acid capsul 20.6 57 0.0017 13.8 9.4 53 244-296 165-227 (276)
278 >1ydy_A Glycerophosphoryl dies 20.6 57 0.0017 13.8 3.2 216 99-335 37-298 (298)
279 >1i3c_A Response regulator RCP 20.6 57 0.0017 13.8 6.1 71 232-302 35-116 (149)
280 >1usy_A ATP phosphoribosyltran 20.5 49 0.0014 14.3 1.5 28 183-210 9-38 (275)
281 >1yvu_A Hypothetical protein A 20.5 33 0.00098 15.4 0.7 68 204-275 12-92 (106)
282 >1dz3_A Stage 0 sporulation pr 20.3 58 0.0017 13.8 3.6 68 232-302 29-102 (109)
283 >3gnn_A Nicotinate-nucleotide 20.2 58 0.0017 13.8 9.4 139 160-324 16-159 (165)
284 >2d2r_A Undecaprenyl pyrophosp 20.2 41 0.0012 14.8 1.1 72 45-120 21-94 (245)
No 1
>>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} (A:36-342)
Probab=100.00 E-value=0 Score=1023.08 Aligned_cols=302 Identities=34% Similarity=0.562 Sum_probs=296.1
Q ss_pred CCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEC-CCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 88877331166675898811048887863288999999999999888936763302-56334554454215765379999
Q gi|255764463|r 35 LSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPN-IPMDLRNNTGSHIIDPDNLINEG 113 (337)
Q Consensus 35 Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~-I~~~~Kd~~GseA~n~dglv~rA 113 (337)
|+++|||||+||+||.+.++||+||||++|||+|.+++++++++++||++|+|||+ +.+++||+.||+|||+||++|||
T Consensus 1 L~~~dlI~PlFV~e~~~~~~~I~sMPGv~r~sid~l~~~~~~~~~~Gi~~v~lFgv~~~~~~Kd~~gs~a~~~~g~v~~a 80 (307)
T 1h7n_A 1 LTKNMLIFPLFISDNPDDFTEIDSLPNINRIGVNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQG 80 (307)
T ss_dssp CCGGGEEEEEEEESSTTCEEECTTSTTCEEECHHHHHHHHHHHHHTTCCEEEEEEECCSTTCCBTTCGGGGCTTSHHHHH
T ss_pred CCHHHCEEEEEEECCCCCCEECCCCCCCCEECHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHCCCCHHHHH
T ss_conf 98899562028931899853478999970458999999999999869997996687887433477883542876689999
Q ss_pred HHHHHHHHCCCEEEECCCCCHHHCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHH
Q ss_conf 99999730144798613327100114310013-65446289999999999999962897352466767799999999987
Q gi|255764463|r 114 ICAIKKNIPNIGIITDVALDPFTIHGHDGILC-DGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDS 192 (337)
Q Consensus 114 Ir~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~-~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~ 192 (337)
||.||++||||+|||||||||||+||||||++ +|.||||+|+++|+|||++||+||||+|||||||||||++||++||+
T Consensus 81 ir~iK~~~pdl~ii~Dvclc~YT~hGHcGil~~~g~idNd~Tl~~la~~Al~~A~AGaDiVAPSdMMDGrV~aIR~aLd~ 160 (307)
T 1h7n_A 81 IKFIREYFPELYIICDVCLCEYTSHGHCGVLYDDGTINRERSVSRLAAVAVNYAKAGAHCVAPSDMIDGRIRDIKRGLIN 160 (307)
T ss_dssp HHHHHHHCTTSEEEEEECSTTTBTTCCSSCBCTTSSBCHHHHHHHHHHHHHHHHHHTCSEEEECCCCTTHHHHHHHHHHH
T ss_pred HHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHH
T ss_conf 99998138870899643568677888712355987547099999999999999981898650004668889999999998
Q ss_pred CCCC-CCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHH
Q ss_conf 7885-773003366643543010167531024467777443157211478898888766408987995531145899999
Q gi|255764463|r 193 HGHI-NVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFR 271 (337)
Q Consensus 193 ~g~~-~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~ 271 (337)
+||. +|+|||||+||||+||||||||++|+|+| ||||||||||+|++||+||+++|++||||||||||||||||||++
T Consensus 161 ~g~~~~v~ImSYsaKyaS~fYGPFRdAa~Sap~~-gDRksYQmdp~n~~eAlre~~~D~~EGAD~iMVKPal~YLDii~~ 239 (307)
T 1h7n_A 161 ANLAHKTFVLSYAAKFSGNLYGPFRDAACSAPSN-GDRKCYQLPPAGRGLARRALERDMSEGADGIIVKPSTFYLDIMRD 239 (307)
T ss_dssp TTCTTTCEEEEEEEEBCSSCCHHHHHHHTCCCSS-SCSTTTSBCTTCHHHHHHHHHHHHHTTCSEEEEESSGGGHHHHHH
T ss_pred HCCCCCCEEEEHHHHHCCCCCCHHHHHHHCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH
T ss_conf 3798665121023433012455589997503257-887611279998799999999617649976985477238999999
Q ss_pred HHHHC-CCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCC
Q ss_conf 99624-9989999346189999999988897889999999999977269999820189999998509
Q gi|255764463|r 272 IKEKF-GLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAARILTHS 337 (337)
Q Consensus 272 ~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~~L~~~ 337 (337)
+|+++ ++|++||||||||||||+|+++||+|++++++|+|++|||||||+||||||+++|+||++.
T Consensus 240 ~k~~~~~~Pv~aYqVSGEYaMikaAa~~G~~d~~~~~~Esl~~~kRAGAd~IiTYfA~~~a~~L~~~ 306 (307)
T 1h7n_A 240 ASEICKDLPICAYHVSGEYAMLHAAAEKGVVDLKTIAFESHQGFLRAGARLIITYLAPEFLDWLDEE 306 (307)
T ss_dssp HHHHTTTSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCSEEEETTHHHHHHHTTC-
T ss_pred HHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHC
T ss_conf 9985679986999720789999999986997588899999999986089889860399999987544
No 2
>>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A* (A:34-337)
Probab=100.00 E-value=0 Score=1023.14 Aligned_cols=301 Identities=48% Similarity=0.847 Sum_probs=296.1
Q ss_pred CHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 88773311666758988110488878632889999999999998889367633025633455445421576537999999
Q gi|255764463|r 36 SVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGIC 115 (337)
Q Consensus 36 s~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr 115 (337)
|++||||||||+||.+.++||+||||++|||+|.+++++++++++||++|+|||++++++||+.|++|||+||++|||||
T Consensus 1 s~~dLI~PlFV~eg~~~~~~I~sMPGv~R~sid~l~~~v~~~~~lGI~~v~lFgv~~~~~Kd~~gs~a~~~~g~v~~air 80 (304)
T 1w5q_A 1 TVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPEGIAQRATR 80 (304)
T ss_dssp CGGGEEEEEEEESSSSCEEECTTSTTCEEEEHHHHHHHHHHHHHTTCCEEEEEECCCGGGCBSSCGGGGCTTSHHHHHHH
T ss_pred CHHHCEEEEEEEECCCCCEECCCCCCCEEECHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 88995531699618998424689998256779999999999998798389987453155567766434686118899999
Q ss_pred HHHHHHCCCEEEECCCCCHHHCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf 999730144798613327100114310013-6544628999999999999996289735246676779999999998778
Q gi|255764463|r 116 AIKKNIPNIGIITDVALDPFTIHGHDGILC-DGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHG 194 (337)
Q Consensus 116 ~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~-~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g 194 (337)
.||++||||+|||||||||||+||||||++ +|.||||+|+++|+|||++||+||||+|||||||||||++||++||++|
T Consensus 81 ~iK~~~p~l~ii~Dvclc~YT~hGHcGil~~~g~vdNd~Tl~~l~~~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g 160 (304)
T 1w5q_A 81 ALRERFPELGIITDVCLCEFTTHGQCGILDDDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAG 160 (304)
T ss_dssp HHHHHCTTSEEEEEECSTTTBTTCCSSCBCTTSCBCHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTHHHHHHHHHHHTT
T ss_pred HHHHHHCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCC
T ss_conf 99997361699850123232454046743466565739999999999999997268867404654158999999999668
Q ss_pred CCCCCEECHHHHHHHHHHCCHHHHHHCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH
Q ss_conf 8577300336664354301016753102446-777744315721147889888876640898799553114589999999
Q gi|255764463|r 195 HINVGIMPYVAKFNSSFYGPYRDAISTRDLL-KGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIK 273 (337)
Q Consensus 195 ~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~-~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k 273 (337)
|++|+|||||+||||+||||||||++|+|+| +||||||||||+|++||+||+++|++|||||||||||+||||||+++|
T Consensus 161 ~~~v~ImSYsaKyaS~fYGPFRdAa~Sap~f~~gDrksYQmdp~n~~eAlre~~~Di~EGAD~iMVKPal~YLDii~~~k 240 (304)
T 1w5q_A 161 HTNVRVMAYSAKYASAYYGPFRDAVGSASNLGKGNRATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVK 240 (304)
T ss_dssp CTTCEEEEEEEEBCCGGGHHHHHC----------CGGGTSBCTTCSHHHHHHHHHHHHTTCSEEEEESCGGGHHHHHHHH
T ss_pred CCCCEEEEHHHHHHHHHHHHHHHHHHCHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHH
T ss_conf 86850321565523343145899862512048998104652789989999999998865887688502046779999999
Q ss_pred HHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCC
Q ss_conf 6249989999346189999999988897889999999999977269999820189999998509
Q gi|255764463|r 274 EKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAARILTHS 337 (337)
Q Consensus 274 ~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~~L~~~ 337 (337)
++|++|++||||||||||||+|+++||+|++ +++|+|++|||||||+||||||+++|+||++.
T Consensus 241 ~~~~~Pv~aY~VSGEYaMikaAa~~G~~de~-~~~Esl~~~kRAGAd~IiTYfA~~~a~~L~~~ 303 (304)
T 1w5q_A 241 DEFRAPTFVYQVSGEYAMHMGAIQNGWLAES-VILESLTAFKRAGADGILTYFAKQAAEQLRRG 303 (304)
T ss_dssp HHHCSCEEEEECHHHHHHHHHHHHTTSSCTT-HHHHHHHHHHHHTCSEEEETTHHHHHHHHHC-
T ss_pred HCCCCCEEEEECCHHHHHHHHHHHCCCCCHH-HHHHHHHHHHHCCCCEEEECCHHHHHHHHHCC
T ss_conf 7569988999781599999999986996261-89999999986499999870499999998567
No 3
>>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reaction intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} (A:26-330)
Probab=100.00 E-value=0 Score=1026.78 Aligned_cols=302 Identities=37% Similarity=0.650 Sum_probs=297.7
Q ss_pred CCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 88877331166675898811048887863288999999999999888936763302563345544542157653799999
Q gi|255764463|r 35 LSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGI 114 (337)
Q Consensus 35 Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAI 114 (337)
|+++|||||+||+||.+.++||+||||+||||+|.+++++++++++||++|+|||++++++||+.||+|||+||++||||
T Consensus 1 L~~~dlI~PlFV~eg~~~~~~I~smPgv~r~sid~l~~~~~~~~~~Gi~~v~lFgv~~~~~Kd~~gs~a~~~~g~v~rai 80 (305)
T 1pv8_A 1 LNASNLIYPIFVTDVPDDIQPITSLPGVARYGVKRLEEMLRPLVEEGLRCVLIFGVPSRVPKDERGSAADSEESPAIEAI 80 (305)
T ss_dssp CCGGGEEEEEEECSCTTCEEECSSSTTCEEECHHHHHHHHHHHHHHTCCEEEEEECC--------------CCSHHHHHH
T ss_pred CCHHHCEEEEEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 67899564249911899822458999975239999999999999889999999788873035887741247222999999
Q ss_pred HHHHHHHCCCEEEECCCCCHHHCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHC
Q ss_conf 9999730144798613327100114310013-654462899999999999999628973524667677999999999877
Q gi|255764463|r 115 CAIKKNIPNIGIITDVALDPFTIHGHDGILC-DGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSH 193 (337)
Q Consensus 115 r~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~-~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~ 193 (337)
|.||++||||+|||||||||||+||||||++ +|+||||+|+++|+||||+||+||||+|||||||||||++||++||++
T Consensus 81 r~iK~~~p~l~vi~Dvclc~YT~hGHcGil~~~g~idND~Tl~~L~~~Als~A~AGADivAPSdMMDGrV~aIR~~Ld~~ 160 (305)
T 1pv8_A 81 HLLRKTFPNLLVACDVCLCPYTSHGHCGLLSENGAFRAEESRQRLAEVALAYAKAGCQVVAPSDMMDGRVEAIKEALMAH 160 (305)
T ss_dssp HHHHHHSTTSEEEEEECCC---------------CHHHHHHHHHHHHHHHHHHHHTCSEEEECC--CCHHHHHHHHHHHT
T ss_pred HHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHC
T ss_conf 99996489818997604576778886352125212372899999999999999718884421045678999999999977
Q ss_pred CCCC-CCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH
Q ss_conf 8857-730033666435430101675310244677774431572114788988887664089879955311458999999
Q gi|255764463|r 194 GHIN-VGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRI 272 (337)
Q Consensus 194 g~~~-~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~ 272 (337)
||+| |+|||||+||+|+||||||||++|+|+| ||||||||||+|++||+||+.+|++||||||||||||||||||+++
T Consensus 161 g~~~~v~ImSYsaKyaS~fYGPFRdA~~Sap~~-gDrktYQmdpan~~eAlre~~~D~~EGAD~iMVKPal~YLDIi~~~ 239 (305)
T 1pv8_A 161 GLGNRVSVMSYSAKFASCFYGPFRDAAKSSPAF-GDRRCYQLPPGARGLALRAVDRDVREGADMLMVKPGMPYLDIVREV 239 (305)
T ss_dssp TCTTTCEEBCCCEECCCGGGHHHHHCC--------------CCTTCHHHHHHHHHHHHHTTCSBEEEESCGGGHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHH
T ss_conf 995520232166654056541468872467667-8830443599778999999986375499778853540789999999
Q ss_pred HHHC-CCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCC
Q ss_conf 9624-9989999346189999999988897889999999999977269999820189999998509
Q gi|255764463|r 273 KEKF-GLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAARILTHS 337 (337)
Q Consensus 273 k~~~-~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~~L~~~ 337 (337)
|+++ ++|++||||||||||||+|+++||+|++++++|+|++|||||||+||||||+++|+||++.
T Consensus 240 k~~~~~~Pv~aYqVSGEYaMikaAa~~G~~d~~~~~~Esl~~~kRAGAd~IiTYfA~~~a~~L~~~ 305 (305)
T 1pv8_A 240 KDKHPDLPLAVYHVSGEFAMLWHGAQAGAFDLKAAVLEAMTAFRRAGADIIITYYTPQLLQWLKEE 305 (305)
T ss_dssp HHHSTTSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTCSEEEETTHHHHHHHTTTC
T ss_pred HHHCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHCC
T ss_conf 974789987999760899999999987997577799999999986299999870199999987339
No 4
>>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynthesis, heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} (A:32-328)
Probab=100.00 E-value=0 Score=1023.61 Aligned_cols=297 Identities=51% Similarity=0.908 Sum_probs=293.4
Q ss_pred CHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 88773311666758988110488878632889999999999998889367633025633455445421576537999999
Q gi|255764463|r 36 SVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGIC 115 (337)
Q Consensus 36 s~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr 115 (337)
|++||||||||+||.+.++||+||||++|||+|.|++++++++++||++|+|||+ | ++||+.|++|||+||++|||||
T Consensus 1 s~~dLI~PiFV~eg~~~~~pI~SMPGv~R~sid~l~~~ve~~~~lGI~aV~LFgv-p-~~Kd~~gs~a~~~~g~v~~air 78 (297)
T 1w1z_A 1 TVNDLVFPLFVMPGTNAVEEVSSMPGSFRFTIDRAVEECKELYDLGIQGIDLFGI-P-EQKTEDGSEAYNDNGILQQAIR 78 (297)
T ss_dssp CGGGEEEEEEEESSSSCEEEETTEEEEEEEEHHHHHHHHHHHHHHTCCEEEEEEC-C-SSCCSSCGGGGCTTSHHHHHHH
T ss_pred CHHHCEEEEEEEECCCCCEECCCCCCCEEECHHHHHHHHHHHHHCCCCEEEEEEC-C-CCCCCCCHHHCCCCCHHHHHHH
T ss_conf 7899265359963899732569999944777999999999998707858999845-4-3445672221254427999999
Q ss_pred HHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCC
Q ss_conf 99973014479861332710011431001365446289999999999999962897352466767799999999987788
Q gi|255764463|r 116 AIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGH 195 (337)
Q Consensus 116 ~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~ 195 (337)
.||++||||+|||||||||||+||||||+++|.||||+|+++|++||++||+||||+|||||||||||++||++||++||
T Consensus 79 ~iK~~~p~l~vi~Dvclc~YT~hGHcGil~~g~idNd~Tl~~l~~~Al~~A~AGadivAPSdMMDGrV~aIR~aLd~~g~ 158 (297)
T 1w1z_A 79 AIKKAVPELCIMTDVALDPFTPFGHDGLVKDGIILNDETVEVLQKMAVSHAEAGADFVSPSDMMDGRIGAIREALDETDH 158 (297)
T ss_dssp HHHHHSTTSEEEEEECSTTTSTTSCSSEESSSCEEHHHHHHHHHHHHHHHHHHTCSEEEECSCCTTHHHHHHHHHHHTTC
T ss_pred HHHHHHCCCEEEEECCCCCHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 99864216179853143300122150031489733389999999999999965787021445535799999999984474
Q ss_pred CCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH
Q ss_conf 57730033666435430101675310244677774431572114788988887664089879955311458999999962
Q gi|255764463|r 196 INVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEK 275 (337)
Q Consensus 196 ~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~ 275 (337)
++|+|||||+||+|+||||||||++|+|+| ||||||||||+|++||+||+.+|++|||||||||||+||||||+++|++
T Consensus 159 ~~v~ImSYsaKyaS~fYGPFRdA~~S~p~~-gdrksYQmd~~n~~eAlre~~~D~~EGAD~iMVKPa~~YLDii~~~k~~ 237 (297)
T 1w1z_A 159 SDVGILSYAAKYASSFYGPFRDALHSAPQF-GDKSTYQMNPANTEEAMKEVELDIVEGADIVMVKPGLAYLDIVWRTKER 237 (297)
T ss_dssp TTSEEEEEEEEBCCTTCHHHHHHTTCCCCC-SCSTTTSBCTTCSHHHHHHHHHHHHHTCSEEEEESCGGGHHHHHHHHHH
T ss_pred CCCCEECHHHHHHHHHHHHHHHHHHCCCCC-CCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHC
T ss_conf 556310188886477657799987361126-8764220699875899999987787199849852217789999999970
Q ss_pred CCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHH
Q ss_conf 499899993461899999999888978899999999999772699998201899999985
Q gi|255764463|r 276 FGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAARILT 335 (337)
Q Consensus 276 ~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~~L~ 335 (337)
|++|++||||||||||||+|+++||+|++++++|+|++|||||||+||||||+++|+||+
T Consensus 238 ~~~Pv~aYqVSGEYaMikaAa~~G~~d~~~~~~Esl~~~kRAGAd~IiTY~A~~~a~~Lk 297 (297)
T 1w1z_A 238 FDVPVAIYHVSGEYAMVKAAAAKGWIDEDRVMMESLLCMKRAGADIIFTYYAKEAAKKLR 297 (297)
T ss_dssp HCSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTCSEEEETTHHHHHHHHC
T ss_pred CCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHC
T ss_conf 599879997538999999999879975787999999999970999997703999998629
No 5
>>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} (A:26-323)
Probab=100.00 E-value=0 Score=1009.95 Aligned_cols=296 Identities=42% Similarity=0.679 Sum_probs=291.3
Q ss_pred CHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 88773311666758988110488878632889999999999998889367633025633455445421576537999999
Q gi|255764463|r 36 SVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGIC 115 (337)
Q Consensus 36 s~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr 115 (337)
|++||||||||+||.+.++||+||||++|||+|.+++++++++++||++|+|||+ | +.||+.|++|||+||++|||||
T Consensus 1 s~~dlI~PlFV~eg~~~~~~I~sMPgv~r~sid~l~~~v~~~~~~Gi~~v~lFgv-~-~~kd~~gs~a~~~~~~v~~air 78 (298)
T 1l6s_A 1 SLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGI-S-HHTDETGSDAWREDGLVARMSR 78 (298)
T ss_dssp CGGGEEEEEEEETTCSSCEECTTSTTCEEEEGGGHHHHHHHHHHHTCCEEEEEEE-C-SSCBSSCGGGGSTTSHHHHHHH
T ss_pred CHHHCEEEEEEEECCCCCEECCCCCCCEEECHHHHHHHHHHHHHCCCCCEEEECC-C-CCCCCCHHHHCCCCCHHHHHHH
T ss_conf 8899553149921899833468999966758999999999999779760454354-6-7789974241498658999999
Q ss_pred HHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCC
Q ss_conf 99973014479861332710011431001365446289999999999999962897352466767799999999987788
Q gi|255764463|r 116 AIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGH 195 (337)
Q Consensus 116 ~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~ 195 (337)
.||+.||||+|||||||||||+||||||++++.||||+|+++|+|||++||+||||+|||||||||||++||++||++||
T Consensus 79 ~iK~~~p~l~vi~DvcLc~YT~hGHcGil~~~~idND~Tl~~l~~~Al~~A~AGaDiVAPSdMMDGrV~aIR~aLd~~g~ 158 (298)
T 1l6s_A 79 ICKQTVPEMIVMSDTCFCEYTSHGHCGVLXEHGVDNDATLENLGKQAVVAAAAGADFIAPSAAMDGQVQAIRQALDAAGF 158 (298)
T ss_dssp HHHHHCTTSEEEEEECSTTTBSSCCSSCBCSSSBCHHHHHHHHHHHHHHHHHHTCSEEEECSCCTTHHHHHHHHHHHTTC
T ss_pred HHHHCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHHHCCC
T ss_conf 99840897738741432667688874120167757589999999999999981798125131056599999999997698
Q ss_pred CCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH
Q ss_conf 57730033666435430101675310244677774431572114788988887664089879955311458999999962
Q gi|255764463|r 196 INVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEK 275 (337)
Q Consensus 196 ~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~ 275 (337)
++|+|||||+||+|+||||||||++|+| +||||||||||+|++||+||+++|++||||||||||||||||||+++|++
T Consensus 159 ~~v~ImSYsaKfaS~fYGPFRdA~~Sap--~gDrksYQmdp~n~~eAlre~~~D~~EGAD~vMVKPal~YLDIi~~~k~~ 236 (298)
T 1l6s_A 159 KDTAIMSYSTKFASSFYGPFREAAGSAL--KGDRKSYQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRER 236 (298)
T ss_dssp TTCEEBCCCEEBCCSCCHHHHHHHTCCC--SSCCTTTSBCTTCHHHHHHHHHHHHHTTCSBEEEESCTTCHHHHHHHHTT
T ss_pred CCCEEEEHHHHHHHHCCCHHHHHHCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH
T ss_conf 6751321023434513452778844878--89985210587766899998603144298658840441378899999982
Q ss_pred CCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHH
Q ss_conf 499899993461899999999888978899999999999772699998201899999985
Q gi|255764463|r 276 FGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAARILT 335 (337)
Q Consensus 276 ~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~~L~ 335 (337)
|++|++||||||||||||+|+++||+|++++++|+|++|||||||+||||||+|+|+||-
T Consensus 237 ~~~Pv~aYqVSGEYaMikaAa~~G~~d~~~~~~Esl~~~kRAGAd~IiTYfA~~~a~~L~ 296 (298)
T 1l6s_A 237 TELPIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEKKI 296 (298)
T ss_dssp CSSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCSEEEETTHHHHHHTTS
T ss_pred CCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
T ss_conf 699889997528999999999869975676999999999862999998707899999874
No 6
>>2qyg_A Ribulose bisphosphate carboxylase-like protein 2; beta-alpha-barrel, unknown function; 3.30A {Rhodopseudomonas palustris CGA009} (A:165-452)
Probab=96.23 E-value=0.018 Score=37.54 Aligned_cols=143 Identities=16% Similarity=0.147 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999999999628973524667677999999999877885773003366643543010167531024467777443
Q gi|255764463|r 153 ETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTY 232 (337)
Q Consensus 153 ~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sY 232 (337)
.|.+.+++++-.++..|+|+|- |.+++.|-+-+.+.-...-+ .+|++.+-.-.|.++-|
T Consensus 33 ls~~~~a~~~y~~~~GG~D~iK----------------DDE~l~~q~f~p~~eRv~~~-----~~ai~~a~~eTG~~~lY 91 (288)
T 2qyg_A 33 LPPQPFAELGYQSWTGGLDIAK----------------DDEMLADVDWCPLAERAALL-----GDACRRASAETGVPKIY 91 (288)
T ss_dssp CCSHHHHHHHHHHHHHTCSEEE----------------CCTTCCSCTTSCHHHHHHHH-----HHHHHHHHHHHSSCCEE
T ss_pred CCHHHHHHHHHHHHHCCCCCCC----------------CCCCCCCCCCCCHHHHHHHH-----HHHHHHHHHHHCCEEEE
T ss_conf 9989999999999863798103----------------78566797888699999999-----99999999985971047
Q ss_pred CCCCCHH-HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEE-CCHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 1572114-788988887664089879955311458999999962499899993-46189999999988897889999999
Q gi|255764463|r 233 YLDPANV-QEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQ-VSGEYAMIKAASLQGWINKNDAMMES 310 (337)
Q Consensus 233 Qmd~~n~-~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYq-VSGEYami~~a~~~g~~d~~~~~~E~ 310 (337)
-.|.... .|-++.+..=.++|+..+||-|...=++.++.+++.+.+|+.+=- .+|-|+- ....| ++. .++-
T Consensus 92 a~NiTg~~~em~~ra~~a~~~G~~~vmi~~~~~G~~al~~L~~~~~l~ihaHrA~~ga~~r---~~~~G-is~--~vl~- 164 (288)
T 2qyg_A 92 LANITDEVDRLTELHDVAVANGAGALLINAMPVGLSAVRMLRKHATVPLIAHFPFIAAFSR---LANYG-IHS--RVMT- 164 (288)
T ss_dssp EEECCCCTTHHHHHHHHHHHTTCCEEEEEHHHHCHHHHHHHHTTCCSCEEEECTTHHHHHS---CTTSE-ECH--HHHH-
T ss_pred EECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCEEECC---CCCCC-CCH--HHHH-
T ss_conf 5026888999999998798729948999365535799999986088645761555301136---87885-719--9999-
Q ss_pred HHHHHHHCCCEEEE
Q ss_conf 99997726999982
Q gi|255764463|r 311 LLAFKRAGCDGIFT 324 (337)
Q Consensus 311 l~~~kRAGAd~Iit 324 (337)
.-++-||||.|++
T Consensus 165 -kl~RLaGaD~i~~ 177 (288)
T 2qyg_A 165 -RLQRLAGFDVVIM 177 (288)
T ss_dssp -HHHHHHTCSEEEE
T ss_pred -HHHHHHCCCEEEE
T ss_conf -9999818881241
No 7
>>1ykw_A Rubisco-like protein; beta-alpha-barrel, unknown function; 2.00A {Chlorobaculum tepidum} (A:145-435)
Probab=96.01 E-value=0.041 Score=35.09 Aligned_cols=144 Identities=15% Similarity=0.137 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999999999628973524667677999999999877885773003366643543010167531024467777443
Q gi|255764463|r 153 ETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTY 232 (337)
Q Consensus 153 ~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sY 232 (337)
.|-+.+++++-.++..|+|+|- |.+++.|-+-+.+.-...-+ .+|++-+..-.|.|+-|
T Consensus 33 ls~~~~a~~~y~~~~GG~D~IK----------------DDE~l~~~~~~p~~eRv~~~-----~~ai~~a~~eTG~~~~y 91 (291)
T 1ykw_A 33 LSPGEFAEIAYQSWLGGLDIAK----------------DDEMLADVTWSSIEERAAHL-----GKARRKAEAETGEPKIY 91 (291)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEE----------------CCTTCSSBTTBCHHHHHHHH-----HHHHHHHHHHHSSCCEE
T ss_pred CCHHHHHHHHHHHHHCCCCCCC----------------CCCCCCCCCCCCHHHHHHHH-----HHHHHHHHHHHCCEEEE
T ss_conf 8978888999999861477001----------------77656698878499999999-----99999999975975589
Q ss_pred CCCCCHH-HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEE-CCHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 1572114-788988887664089879955311458999999962499899993-46189999999988897889999999
Q gi|255764463|r 233 YLDPANV-QEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQ-VSGEYAMIKAASLQGWINKNDAMMES 310 (337)
Q Consensus 233 Qmd~~n~-~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYq-VSGEYami~~a~~~g~~d~~~~~~E~ 310 (337)
-.|.... .|-++.+..=.+.||.++||-|...=++.++.+++...+|+.+=- .+|-|+-- ...| ++. .++-
T Consensus 92 a~NiT~~~~em~~ra~~a~~~Ga~~vmi~~~~~G~~al~~L~~~~~lpIhaHra~~ga~~r~---~~~G-is~--~vl~- 164 (291)
T 1ykw_A 92 LANITDEVDSLMEKHDVAVRNGANALLINALPVGLSAVRMLSNYTQVPLIGHFPFIASFSRM---EKYG-IHS--KVMT- 164 (291)
T ss_dssp EEECCCCGGGHHHHHHHHHHHTCCEEEEEHHHHCHHHHHHHHHHCSSCEEEECTTTHHHHCS---TTSE-ECH--HHHH-
T ss_pred ECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCC---CCCC-CCH--HHHH-
T ss_conf 60367768999999999998399789993676556999999875163300022101320257---7785-139--9999-
Q ss_pred HHHHHHHCCCEEEEC
Q ss_conf 999977269999820
Q gi|255764463|r 311 LLAFKRAGCDGIFTY 325 (337)
Q Consensus 311 l~~~kRAGAd~IitY 325 (337)
.-.+-||||.+++-
T Consensus 165 -kl~RLaGaD~ih~~ 178 (291)
T 1ykw_A 165 -KLQRLAGLDAVIMP 178 (291)
T ss_dssp -HHHHHHTCSEEEEE
T ss_pred -HHHHHCCCCEEEEC
T ss_conf -99998288735524
No 8
>>2zvi_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; methionine salvage pathway, amino-acid biosynthesis, isomerase, magnesium, metal- binding; 2.30A {Bacillus subtilis} (A:127-425)
Probab=95.97 E-value=0.065 Score=33.72 Aligned_cols=145 Identities=20% Similarity=0.212 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999999999628973524667677999999999877885773003366643543010167531024467777443
Q gi|255764463|r 153 ETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTY 232 (337)
Q Consensus 153 ~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sY 232 (337)
-|-+.+++++..++..|+|+|- |.+++.|-+-+.+.....-+ .+|++-+-.-.|-++-|
T Consensus 40 Lsp~~~a~~~y~~~~GGiD~IK----------------DDE~l~~q~~~p~~eRv~a~-----~~a~~~a~~eTG~~~~y 98 (299)
T 2zvi_A 40 RDLSDIKEQLRQQALGGVDLIK----------------DDEIFFETGLAPFETRIAEG-----KQILKETYEQTGHKTLY 98 (299)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEE----------------CCTTCCCSSSSCHHHHHHHH-----HHHHHHHHHHHSCCCEE
T ss_pred CCHHHHHHHHHHHHHHCCCCCC----------------CCCCCCCCCCCCHHHHHHHH-----HHHHHHHHHHHCCCCEE
T ss_conf 9978999999999972688435----------------87566797778489999999-----99999999986995147
Q ss_pred CCCCCHH-HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHC--CCCEEEEE-CCHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 1572114-7889888876640898799553114589999999624--99899993-461899999999888978899999
Q gi|255764463|r 233 YLDPANV-QEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKF--GLPTFAYQ-VSGEYAMIKAASLQGWINKNDAMM 308 (337)
Q Consensus 233 Qmd~~n~-~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~--~~P~~aYq-VSGEYami~~a~~~g~~d~~~~~~ 308 (337)
-+|.... .|-++.++.=.++|++.+||-|...=++.++.+++.. ++|+.+=- .+|-|.-- -..| ++.. .+
T Consensus 99 a~NiT~~~~em~~ra~~a~e~G~~~~mi~~~~~G~~a~~~L~~~~~~~lpIhaHrA~~ga~~r~---~~~G-is~~-~v- 172 (299)
T 2zvi_A 99 AVNLTGRTADLKDKARRAAELGADALLFNVFAYGLDVMQGLAEDPEIPVPIMAHPAVSGAFTSS---PFYG-FSHA-LL- 172 (299)
T ss_dssp EEECCSCGGGHHHHHHHHHHTTCSEEEECGGGTCHHHHHHHHHCTTCCSCEEECCTTGGGGTSC---SSSE-ECHH-HH-
T ss_pred EEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCEEECC---CCCC-EEHH-HH-
T ss_conf 7123788789999999899837886999842154999999986177884488503544125318---8886-1259-99-
Q ss_pred HHHHHHHHHCCCEEEEC
Q ss_conf 99999977269999820
Q gi|255764463|r 309 ESLLAFKRAGCDGIFTY 325 (337)
Q Consensus 309 E~l~~~kRAGAd~IitY 325 (337)
.-.-.+-||||.|++-
T Consensus 173 -~~kl~RLaGaD~i~~~ 188 (299)
T 2zvi_A 173 -LGKLNRYCGADFSLFP 188 (299)
T ss_dssp -TTHHHHHTTCSEEEEC
T ss_pred -HHHHHHHCCCCEEECC
T ss_conf -9999988197832667
No 9
>>3fk4_A Rubisco-like protein; structural genomics, target 9463A, PSI-2, protein structure initiative; 2.00A {Bacillus cereus atcc 14579} (A:122-414)
Probab=95.73 E-value=0.051 Score=34.45 Aligned_cols=137 Identities=24% Similarity=0.256 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHHHCCCCEEE--------CCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCC
Q ss_conf 9999999999999962897352--------46676779999999998778857730033666435430101675310244
Q gi|255764463|r 153 ETIELISHAAVIQADAGADIIA--------PSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDL 224 (337)
Q Consensus 153 ~Tl~~L~k~Al~~A~AGaDivA--------PSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~ 224 (337)
-|-+.+++++-.++..|+|+|- |-.=++-||.+..+++++ +-.
T Consensus 32 lsp~~~a~~~y~~~~GGvD~IKDDE~l~~q~~~p~~eRv~~~~~ai~~-----------------------------a~~ 82 (293)
T 3fk4_A 32 RNIGYLKTQLRDQAIGGVDIVKDDEILFENALTPLTKRIVSGKEVLQS-----------------------------VYE 82 (293)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCTTCCSCSSSCHHHHHHHHHHHHHH-----------------------------HHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----------------------------HHH
T ss_conf 986788999999997078863476556797757488899999999999-----------------------------999
Q ss_pred CCCCCCCCCCCCCHH-HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH--CCCCEEEE-ECCHHHHHHHHHHHCCC
Q ss_conf 677774431572114-788988887664089879955311458999999962--49989999-34618999999998889
Q gi|255764463|r 225 LKGDKKTYYLDPANV-QEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEK--FGLPTFAY-QVSGEYAMIKAASLQGW 300 (337)
Q Consensus 225 ~~gdr~sYQmd~~n~-~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~--~~~P~~aY-qVSGEYami~~a~~~g~ 300 (337)
-.|.|+-|-.|.... .|-++.+..=.++|+..+||-|...=++.++.+++. +++|+.+= ..+|-|.- .-..|
T Consensus 83 eTG~~~lYa~NiT~~~~em~~ra~~a~~~G~~~~mi~~~~~G~~al~~La~~~~~~lpIhaHra~~ga~~r---~~~~G- 158 (293)
T 3fk4_A 83 TYGHKTLYAVNLTGRTFDLKENAKRAVQAGADILLFNVFAYGLDVLQSLAEDDEIPVPIMAHPAVSGAYSA---SKLYG- 158 (293)
T ss_dssp HHCCCCEEEEECCSCGGGHHHHHHHHHHHTCSEEEECHHHHCHHHHHHHHHCTTSCSCEEECCTTTHHHHS---CSSSS-
T ss_pred HHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEECCCCCEEECC---CCCCC-
T ss_conf 85986546634178889999999999985997899966645099999998567889637851466512314---88776-
Q ss_pred CCHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 7889999999999977269999820
Q gi|255764463|r 301 INKNDAMMESLLAFKRAGCDGIFTY 325 (337)
Q Consensus 301 ~d~~~~~~E~l~~~kRAGAd~IitY 325 (337)
++.. .++- .-.+-||||.+++-
T Consensus 159 i~~~-~vl~--kl~RLaGaD~i~~~ 180 (293)
T 3fk4_A 159 VSSP-LLLG--KLLRYAGADFSLFP 180 (293)
T ss_dssp BCHH-HHHT--HHHHHHTCSEEEEE
T ss_pred CCHH-HHHH--HHHHHHCCCCCCCC
T ss_conf 3449-9999--99998188844124
No 10
>>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} (A:1-343)
Probab=95.62 E-value=0.13 Score=31.66 Aligned_cols=128 Identities=16% Similarity=0.039 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCC--CC--CCEECHHHHHHHHHHCCHHHHHHCCCCCC
Q ss_conf 289999999999999962897352466767799999999987788--57--73003366643543010167531024467
Q gi|255764463|r 151 NDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGH--IN--VGIMPYVAKFNSSFYGPYRDAISTRDLLK 226 (337)
Q Consensus 151 ND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~--~~--~~ImsYsaKfaS~fYgPFRdA~~S~p~~~ 226 (337)
-..-.+.+++.|..-.+||+|.|--..=...-+. +-|--... ++ -+-+-=-.+|.-..+.--|++++..=..
T Consensus 144 i~~i~~~f~~aA~~a~~aG~DgVei~~~~g~L~~---qFlsp~~n~r~d~yGgsl~nr~r~~~eii~air~~~~~~~~V- 219 (343)
T 1o94_A 144 IAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPL---QFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAI- 219 (343)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHH---HHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEE-
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHH---HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEE-
T ss_conf 9999999999999999709788997317565688---640763789964357885665178999999888550898658-
Q ss_pred CCCC---CCCCCCCHHHH-HHHHHHHHHHCCCCEEEECCCH-----------------HHHHHHHHHHHHCCCCEEE
Q ss_conf 7774---43157211478-8988887664089879955311-----------------4589999999624998999
Q gi|255764463|r 227 GDKK---TYYLDPANVQE-AIREASIDIQESADMLLVKPGL-----------------PYLDVCFRIKEKFGLPTFA 282 (337)
Q Consensus 227 gdr~---sYQmd~~n~~e-A~~e~~~D~~EGAD~lMVKPa~-----------------~yLDii~~~k~~~~~P~~a 282 (337)
+=|- .++-...+..| .+.-+..-++-|+|++-|-.+. .++++.+.+|+.++.||.+
T Consensus 220 ~iR~~~~d~~~~g~~~~e~~~~~~~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~ 296 (343)
T 1o94_A 220 ATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLG 296 (343)
T ss_dssp EEEEEEECSSCTTSCCTTTHHHHHHHHHGGGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEEC
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf 99974300558997756677899999998444442413465223233556654566444404799987641785214
No 11
>>2oem_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; rubisco-like protein, isomerase; HET: KCX 1AE; 1.70A {Geobacillus kaustophilus} PDB: 2oel_A* 2oek_A* 2oej_A (A:120-413)
Probab=95.10 E-value=0.13 Score=31.60 Aligned_cols=137 Identities=19% Similarity=0.202 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHHCCCCEEE--------CCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCC
Q ss_conf 9999999999999962897352--------46676779999999998778857730033666435430101675310244
Q gi|255764463|r 153 ETIELISHAAVIQADAGADIIA--------PSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDL 224 (337)
Q Consensus 153 ~Tl~~L~k~Al~~A~AGaDivA--------PSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~ 224 (337)
.|-+.+++++-.++..|+|+|- |-.=+.-||.+..+++++. -.
T Consensus 33 lsp~~~a~~~y~~~~GGvD~IKDDE~l~~q~~~p~~eRv~~~~~a~~~a-----------------------------~~ 83 (294)
T 2oem_A 33 RDLAYLTSELKKQALGGVDLVXDDEILFDSELLPFEKRITEGKAALQEV-----------------------------YE 83 (294)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCTTCCCCSSSCHHHHHHHHHHHHHHH-----------------------------HH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-----------------------------HH
T ss_conf 9843799999999871477434655577976575899999999999999-----------------------------99
Q ss_pred CCCCCCCCCCCCCH-HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHC--CCCEEE-EECCHHHHHHHHHHHCCC
Q ss_conf 67777443157211-47889888876640898799553114589999999624--998999-934618999999998889
Q gi|255764463|r 225 LKGDKKTYYLDPAN-VQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKF--GLPTFA-YQVSGEYAMIKAASLQGW 300 (337)
Q Consensus 225 ~~gdr~sYQmd~~n-~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~--~~P~~a-YqVSGEYami~~a~~~g~ 300 (337)
-.|-|+-|-.|... ..|-++.++.=.++|+..+||-|...=++.++.+++.. .+|+.+ ...+|-|.- .-..|
T Consensus 84 eTG~~~~ya~NiT~~~~em~~ra~~~~~~G~~~~mv~~~~~G~~al~~l~~~~~~~~pihaHrA~~ga~~~---~~~~G- 159 (294)
T 2oem_A 84 QTGKRTLYAVNLTGKTFALKDKAKRAAELGADVLLFNVFAYGLDVLQALREDEEIAVPIMAHPAFSGAVTP---SEFYG- 159 (294)
T ss_dssp HHSCCCEEEEECCSCGGGHHHHHHHHHHTTCSEEEECGGGSCHHHHHHHHHCTTTCCCEEECCTTGGGTSS---CSSSS-
T ss_pred HHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCCEECC---CCCCC-
T ss_conf 86896169966588989999999999975998899955767689998988606567348996135311314---78887-
Q ss_pred CCHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 7889999999999977269999820
Q gi|255764463|r 301 INKNDAMMESLLAFKRAGCDGIFTY 325 (337)
Q Consensus 301 ~d~~~~~~E~l~~~kRAGAd~IitY 325 (337)
++.. +++- .-.+-||||.|++-
T Consensus 160 i~~~-v~l~--kl~RlaGaD~ih~~ 181 (294)
T 2oem_A 160 VAPS-LWLG--KLLRLAGADFVLFP 181 (294)
T ss_dssp BCHH-HHTT--HHHHHHTCSEEEEE
T ss_pred EEHH-HHHH--HHHHHCCCCEEECC
T ss_conf 4379-9999--99998298713415
No 12
>>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A* (A:1-110,A:153-365)
Probab=94.48 E-value=0.19 Score=30.52 Aligned_cols=32 Identities=25% Similarity=0.367 Sum_probs=21.7
Q ss_pred HHHHHHCC-CCEEEE-CCCHHHHHHHHHHHHHCC
Q ss_conf 88766408-987995-531145899999996249
Q gi|255764463|r 246 ASIDIQES-ADMLLV-KPGLPYLDVCFRIKEKFG 277 (337)
Q Consensus 246 ~~~D~~EG-AD~lMV-KPa~~yLDii~~~k~~~~ 277 (337)
++.-+++| ||.||+ .|++..-|+++++++...
T Consensus 265 a~~~l~~g~~D~V~igR~~l~nP~l~~ki~~g~~ 298 (323)
T 2gou_A 265 AEQAINDGLADMIGFGRPFIANPDLPERLRHGYP 298 (323)
T ss_dssp HHHHHHTTSCSEEECCHHHHHCTTHHHHHHHTCC
T ss_pred HHHHHHCCCCCHHHHHHHHHHCCCHHHHHHCCCC
T ss_conf 9999987997668989999989239999972998
No 13
>>2d69_A Ribulose bisphosphate carboxylase; alpha/beta barrel, structural genomics, NPPSFA; 1.90A {Pyrococcus horikoshii OT3} (A:134-430)
Probab=94.45 E-value=0.26 Score=29.61 Aligned_cols=136 Identities=17% Similarity=0.215 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHHCCCCEEE--------CCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCC
Q ss_conf 9999999999999962897352--------46676779999999998778857730033666435430101675310244
Q gi|255764463|r 153 ETIELISHAAVIQADAGADIIA--------PSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDL 224 (337)
Q Consensus 153 ~Tl~~L~k~Al~~A~AGaDivA--------PSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~ 224 (337)
.|-+.+++++..++..|+|+|= |-.=+.-||.++.+++++ +-.
T Consensus 32 lsp~~~a~~~ye~~~GGvD~IKDDE~l~~~~~~p~~eRv~~~~ea~~~-----------------------------a~~ 82 (297)
T 2d69_A 32 WSVEEYAEIAYELWSGGIDLLKDDENFTSFPFNRFEERVRKLYRVRDR-----------------------------VEA 82 (297)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCTTCSCBTTBCHHHHHHHHHHHHHH-----------------------------HHH
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----------------------------HHH
T ss_conf 898999999999971476613465435798877689999999999999-----------------------------999
Q ss_pred CCCCCCCCCCCCCHH-HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH---HCCCCEEEE-ECCHHHHHHHHHHHCC
Q ss_conf 677774431572114-78898888766408987995531145899999996---249989999-3461899999999888
Q gi|255764463|r 225 LKGDKKTYYLDPANV-QEAIREASIDIQESADMLLVKPGLPYLDVCFRIKE---KFGLPTFAY-QVSGEYAMIKAASLQG 299 (337)
Q Consensus 225 ~~gdr~sYQmd~~n~-~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~---~~~~P~~aY-qVSGEYami~~a~~~g 299 (337)
-.|-|+-|-.+.... .|-++....=.++|+.++||-|...=++.++.+++ .+.+|+.+= -.+|-|+ - ..+.
T Consensus 83 eTG~~~lya~NiT~~~~em~~ra~~a~~~G~~~~mv~~~~~G~~~l~~lr~~~~~~~l~ih~H~a~~g~~~---~-~~~~ 158 (297)
T 2d69_A 83 ETGETKEYLINITGPVNIMEKRAEMVANEGGQYVMIDIVVAGWSALQYMREVTEDLGLAIHAHRAMHAAFT---R-NPRH 158 (297)
T ss_dssp HHSSCCEEECBCCSSHHHHHHHHHHHHHHTCCEEEEEHHHHCHHHHHHHHHHHHHHTCEEEEECTTTHHHH---S-CTTS
T ss_pred HHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCEEE---C-CCCC
T ss_conf 75884079854579999999999989983787796324467658999999973104715774266553251---3-7667
Q ss_pred CCCHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 97889999999999977269999820
Q gi|255764463|r 300 WINKNDAMMESLLAFKRAGCDGIFTY 325 (337)
Q Consensus 300 ~~d~~~~~~E~l~~~kRAGAd~IitY 325 (337)
-++.. ++ -.-.+-||||.|++-
T Consensus 159 G~s~~--v~--~kl~RLaGaD~i~~~ 180 (297)
T 2d69_A 159 GITML--AL--AKAARMIGVDQIHTG 180 (297)
T ss_dssp EECHH--HH--HHHHHHHTCSEEECC
T ss_pred CCCHH--HH--HHHHHHCCCCEEECC
T ss_conf 85599--99--999997298821127
No 14
>>1geh_A Ribulose-1,5-bisphosphate carboxylase/oxygenase; pentagonal toroid decamer, rubisco, lyase; 2.80A {Thermococcus kodakarensis KOD1} (A:137-288,A:360-444)
Probab=93.85 E-value=0.54 Score=27.48 Aligned_cols=109 Identities=15% Similarity=0.132 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999999999628973524667677999999999877885773003366643543010167531024467777443
Q gi|255764463|r 153 ETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTY 232 (337)
Q Consensus 153 ~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sY 232 (337)
-|-+.+++++-..+..|.|+|- |.++..+-+-|.+.-.+.-+ .+|+..+-.-.|-++-|
T Consensus 32 lsp~~~a~~~ye~~~GGlDfIK----------------DDE~l~~q~f~p~~eRv~~v-----~eai~~a~~eTGe~k~y 90 (237)
T 1geh_A 32 YSPEEFEKLAYDLLSNGADYMK----------------DDENLTSPWYNRFEERAEIM-----AKIIDKVENETGEKKTW 90 (237)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEE----------------CCTTCCCCTTSCHHHHHHHH-----HHHHHHHHHHTCSCCEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEC----------------CCCCCCCCCCCCHHHHHHHH-----HHHHHHHHHHHCCEEEE
T ss_conf 9989999999999736876312----------------65124698878599999999-----99999999986980389
Q ss_pred CCCCCH-HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH---HCCCCEEE
Q ss_conf 157211-478898888766408987995531145899999996---24998999
Q gi|255764463|r 233 YLDPAN-VQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKE---KFGLPTFA 282 (337)
Q Consensus 233 Qmd~~n-~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~---~~~~P~~a 282 (337)
-+|... ..|-++.++.=.++|+.++||-|...=++.++.+++ .+.+|+.+
T Consensus 91 ~~NiTa~~~em~~Ra~~a~e~Ga~~vMid~~~~G~sal~~La~~~~~~gl~lh~ 144 (237)
T 1geh_A 91 FANITADLLEMEQRLEVLADLGLKHAMVDVVITGWGALRYIRDLAADYGLAIHG 144 (237)
T ss_dssp ECBCCSSHHHHHHHHHHHHHHTCCEEEEEHHHHCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEE
T ss_conf 987379989999999999974998799834002157999999855567806885
No 15
>>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; YP_293392.1, prokaryotic protein of unknown function (DUF849), structural genomics; HET: MSE; 1.72A {Ralstonia eutropha JMP134} (A:)
Probab=93.06 E-value=0.53 Score=27.58 Aligned_cols=93 Identities=16% Similarity=0.165 Sum_probs=72.6
Q ss_pred HHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CCCCCCCCCC
Q ss_conf 863477888773311666758988110488878632889999999999998889367633025633455-4454215765
Q gi|255764463|r 29 MVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRN-NTGSHIIDPD 107 (337)
Q Consensus 29 Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd-~~GseA~n~d 107 (337)
-..+...++.+.-.|++|+--.|.....+++--.-=++.+++.+++.+|++.|=..+=|. -+| ++|..+++++
T Consensus 9 ~~~~~~~~~~~~~~~viItaA~nGa~~~k~~~P~lP~TpeEIa~~A~~c~~AGAaivHlH------~Rd~~dG~~s~d~~ 82 (316)
T 3c6c_A 9 HHHHENLYFQGXSRKVILTCAVTGNAPFNPKHPSXPITPAQIADACVEAAKAGASVAHIH------VRDPKTGGGSRDPV 82 (316)
T ss_dssp ------------CCEECEEEECCCSSCCCTTSTTCCCSHHHHHHHHHHHHHHTCSEEEEC------EECTTTCCEECCHH
T ss_pred CHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE------ECCCCCCCCCCCHH
T ss_conf 011888999728997599987789969722399998998999999999998187389987------55888899678999
Q ss_pred CHHHHHHHHHHHHHCCCEEEE
Q ss_conf 379999999997301447986
Q gi|255764463|r 108 NLINEGICAIKKNIPNIGIIT 128 (337)
Q Consensus 108 glv~rAIr~IK~~fpdl~vi~ 128 (337)
.+-++++.||+..||++|-.
T Consensus 83 -~y~eii~~IR~~~pd~ii~~ 102 (316)
T 3c6c_A 83 -LFKEVVDRVRSSGTDIVLNL 102 (316)
T ss_dssp -HHHHHHHHHHTTTCCCEEEE
T ss_pred -HHHHHHHHHHHHCCCEEEEE
T ss_conf -99999999998738807984
No 16
>>2h8z_A Xenobiotic reductase A; beta-alpha barrel, oxidoreductase; HET: FMN 8CM; 1.42A {Pseudomonas putida} PDB: 2h90_A* 2h8x_A* (A:1-104,A:149-359)
Probab=92.98 E-value=0.81 Score=26.31 Aligned_cols=30 Identities=13% Similarity=0.214 Sum_probs=14.6
Q ss_pred HHHHHCC-CCEEEE-CCCHHHHHHHHHHHHHC
Q ss_conf 8766408-987995-53114589999999624
Q gi|255764463|r 247 SIDIQES-ADMLLV-KPGLPYLDVCFRIKEKF 276 (337)
Q Consensus 247 ~~D~~EG-AD~lMV-KPa~~yLDii~~~k~~~ 276 (337)
+.-+++| +|++|+ .|.+.--|+++++++..
T Consensus 266 ~~~l~~g~~D~V~igR~~l~dP~l~~ki~~~~ 297 (315)
T 2h8z_A 266 EAALQANQLDLVSVGRAHLADPHWAYFAAKEL 297 (315)
T ss_dssp HHHHHTTSCSEEECCHHHHHCTTHHHHHHHHT
T ss_pred HHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHC
T ss_conf 99998799533166399886915999999778
No 17
>>3chv_A Prokaryotic domain of unknown function (DUF849) with A TIM barrel fold; YP_164873.1; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A (A:)
Probab=92.56 E-value=0.64 Score=27.02 Aligned_cols=80 Identities=14% Similarity=0.193 Sum_probs=59.4
Q ss_pred CCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 11666758988110488878632889999999999998889367633025633455445421576537999999999730
Q gi|255764463|r 42 LPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI 121 (337)
Q Consensus 42 ~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f 121 (337)
.|++|+--.|....-+++--.-=++.+++.+++.++++.|-..+=|. -+|++|..+++++ ..-+++..||+..
T Consensus 8 ~~viItaA~nGa~~~k~~~P~lP~TpeEia~~a~~c~~AGAaivHlH------~R~~dG~~s~d~~-~y~e~i~~Ir~~~ 80 (284)
T 3chv_A 8 KPCIICVAITGSVPTKADNPAVPITVSEQVESTQEAFEAGAAIAHCH------VRNDDGTPSSDPD-RFARLTEGLHTHC 80 (284)
T ss_dssp CCBCEEEECCCSSCCTTTCTTCCCSHHHHHHHHHHHHHHTCCEEEEC------EECTTSCEECCHH-HHHHHHHHHHHHS
T ss_pred CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE------ECCCCCCCCCCHH-HHHHHHHHHHHHC
T ss_conf 97799983689969855699998998999999999998188689987------3289949777889-9999999999866
Q ss_pred CCCEEEE
Q ss_conf 1447986
Q gi|255764463|r 122 PNIGIIT 128 (337)
Q Consensus 122 pdl~vi~ 128 (337)
||++|-.
T Consensus 81 pd~ii~~ 87 (284)
T 3chv_A 81 PGXIVQF 87 (284)
T ss_dssp TTCEEEE
T ss_pred CCCEEEE
T ss_conf 8207974
No 18
>>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A (A:66-396,A:510-576)
Probab=92.54 E-value=0.44 Score=28.10 Aligned_cols=29 Identities=10% Similarity=-0.047 Sum_probs=15.8
Q ss_pred CCCCCCCHHHHHHHHHHHHH--CCCCEEEEE
Q ss_conf 78632889999999999998--889367633
Q gi|255764463|r 60 PDVMRMSIDVAVEKIKQVAD--LGIPAIAIF 88 (337)
Q Consensus 60 PGv~R~Sid~L~~eie~~~~--lGI~av~LF 88 (337)
++-.|++.+..+..++.+.. .|+.++=.-
T Consensus 52 l~~~~~~t~~~~~ia~~l~~~~~Gv~~iEvg 82 (398)
T 3bg3_A 52 LLATRVRTHDLKKIAPYVAHNFSKLFSMENW 82 (398)
T ss_dssp HSTTCCCHHHHHHHHHHHHHHCTTCSEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf 7763879999999999999709894489807
No 19
>>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} PDB: 3hf3_A* (A:)
Probab=90.44 E-value=1.5 Score=24.48 Aligned_cols=33 Identities=24% Similarity=0.272 Sum_probs=21.3
Q ss_pred HHHHHHCC-CCEEEE-CCCHHHHHHHHHHHHHCCC
Q ss_conf 88766408-987995-5311458999999962499
Q gi|255764463|r 246 ASIDIQES-ADMLLV-KPGLPYLDVCFRIKEKFGL 278 (337)
Q Consensus 246 ~~~D~~EG-AD~lMV-KPa~~yLDii~~~k~~~~~ 278 (337)
++.-++|| +|+||+ .|.+.-=|+++++++...+
T Consensus 303 a~~~l~~~~~D~V~igR~~l~nP~l~~k~~~g~~~ 337 (349)
T 3hgj_A 303 AETLLQAGSADLVLLGRVLLRDPYFPLRAAKALGV 337 (349)
T ss_dssp HHHHHHTTSCSEEEESTHHHHCTTHHHHHHHHTTC
T ss_pred HHHHHHCCCCCHHHHHHHHHHCCHHHHHHHCCCCC
T ss_conf 99999879930149889998690599999808998
No 20
>>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate ligand, isomerase; HET: AKG; 1.65A {Deinococcus ficus} (A:1-233)
Probab=89.40 E-value=1.8 Score=23.93 Aligned_cols=169 Identities=14% Similarity=0.127 Sum_probs=99.2
Q ss_pred HHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 99998889367633025633455445421576537999999999730144798613327100114310013654462899
Q gi|255764463|r 75 KQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDET 154 (337)
Q Consensus 75 e~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~T 154 (337)
.-+.+.|...+.+=+..... ..-......-+-+-+...++.|....+ +-++.|. +.|.. .+
T Consensus 30 ~i~~~~G~~~i~~~~~~~a~-~~G~~d~~~~~~~~~~~~~~~i~~~~~-~p~ivD~------~~G~g-----------~~ 90 (233)
T 2ze3_A 30 RLLEAAGFTAIGTTSAGIAH-ARGRTDGQTLTRDEMGREVEAIVRAVA-IPVNADI------EAGYG-----------HA 90 (233)
T ss_dssp HHHHHHTCSCEEECHHHHHH-HSCCCSSSSSCHHHHHHHHHHHHHHCS-SCEEEEC------TTCSS-----------SS
T ss_pred HHHHHCCCCEEEECHHHHHH-HCCCCCCCCCCHHHHHHHHHHHHCCCC-CCEEEEC------CCCCC-----------CC
T ss_conf 99998699999972799999-769999664779999999999860389-7679971------66667-----------62
Q ss_pred HHHHHHHHHHHHHCCCCEEECCCC-------------CCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHC
Q ss_conf 999999999999628973524667-------------6779999999998778857730033666435430101675310
Q gi|255764463|r 155 IELISHAAVIQADAGADIIAPSEM-------------MDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAIST 221 (337)
Q Consensus 155 l~~L~k~Al~~A~AGaDivAPSdM-------------MDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S 221 (337)
.+...+.+-.+.++||+.|-=.|- +-.++.+++++....+ .+..|..-+.|+...
T Consensus 91 ~~~~~~~~~~~~~aGa~~i~ied~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~-~~~~iiarT~~~~~g----------- 158 (233)
T 2ze3_A 91 PEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASG-VPVFLNARTDTFLKG----------- 158 (233)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHT-SCCEEEEECCTTTTT-----------
T ss_pred HHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC-CCEEEEEEECCCCCC-----------
T ss_conf 79999999999982387687526547788765438999988888888886158-842789862121146-----------
Q ss_pred CCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 2446777744315721-147889888876640898799553114589999999624998999934
Q gi|255764463|r 222 RDLLKGDKKTYYLDPA-NVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQV 285 (337)
Q Consensus 222 ~p~~~gdr~sYQmd~~-n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqV 285 (337)
|+.... ...+++.-+....+-|||.+++ |+.+-.+.++++++...+|+-..-.
T Consensus 159 ----------~~~~~~~~~~~ai~ra~a~~~aGAd~i~~-~~~~~~e~~~~i~~~~~~Pv~~~g~ 212 (233)
T 2ze3_A 159 ----------HGATDEERLAETVRRGQAYADAGADGIFV-PLALQSQDIRALADALRVPLNVMAF 212 (233)
T ss_dssp ----------CSSSHHHHHHHHHHHHHHHHHTTCSEEEC-TTCCCHHHHHHHHHHCSSCEEEECC
T ss_pred ----------CCCHHHHHHHHHHHHHHHHHHCCCCEEEE-ECCCCHHHHHHHHHCCCCCEEEECC
T ss_conf ----------66302345999999999987608987996-0679999999998604987686258
No 21
>>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein structure initiative; 2.30A {Brucella melitensis 16M} (A:)
Probab=88.69 E-value=2 Score=23.61 Aligned_cols=25 Identities=16% Similarity=0.203 Sum_probs=13.5
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 3288999999999999888936763
Q gi|255764463|r 63 MRMSIDVAVEKIKQVADLGIPAIAI 87 (337)
Q Consensus 63 ~R~Sid~L~~eie~~~~lGI~av~L 87 (337)
.++|.+..++.++.+.++|+..|=+
T Consensus 21 ~~~~~~~k~~i~~~L~~~Gv~~iE~ 45 (295)
T 1ydn_A 21 RFVPTADKIALINRLSDCGYARIEA 45 (295)
T ss_dssp SCCCHHHHHHHHHHHTTTTCSEEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCEEEE
T ss_conf 9989999999999999829898998
No 22
>>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa PAO1} (A:)
Probab=87.40 E-value=1.8 Score=23.98 Aligned_cols=25 Identities=8% Similarity=0.284 Sum_probs=18.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 3288999999999999888936763
Q gi|255764463|r 63 MRMSIDVAVEKIKQVADLGIPAIAI 87 (337)
Q Consensus 63 ~R~Sid~L~~eie~~~~lGI~av~L 87 (337)
.+++.+..+..++.+.++||..+-+
T Consensus 25 ~~~~~~~k~~i~~~l~~~Gv~~iE~ 49 (302)
T 2ftp_A 25 QPIEVADKIRLVDDLSAAGLDYIEV 49 (302)
T ss_dssp SCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 9889999999999999729999998
No 23
>>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2- propyl-3-methylmalate lyase; 2.70A {Dianthus caryophyllus} (A:)
Probab=87.31 E-value=2.5 Score=23.05 Aligned_cols=165 Identities=18% Similarity=0.149 Sum_probs=102.8
Q ss_pred HHHHHHCCCCEEEEEEC-CCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCC
Q ss_conf 99999888936763302-563345544542--157653799999999973014479861332710011431001365446
Q gi|255764463|r 74 IKQVADLGIPAIAIFPN-IPMDLRNNTGSH--IIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIV 150 (337)
Q Consensus 74 ie~~~~lGI~av~LFp~-I~~~~Kd~~Gse--A~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~Id 150 (337)
.+-+.+.|...+.+-+. +.. ...|.. ..-+-.-+...++.|....+.+-|++|. +.|..+
T Consensus 52 A~~~~~aG~~~i~~sg~~~a~---~~~G~pD~~~~~~~e~~~~~~~i~~~~~~~pviaD~------d~G~g~-------- 114 (318)
T 1zlp_A 52 AAVVEKTGFHAAFVSGYSVSA---AMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDG------DTGGGG-------- 114 (318)
T ss_dssp HHHHHHTTCSEEEECHHHHHH---HHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEEC------TTCSSS--------
T ss_pred HHHHHHCCCCEEEHHHHHHHH---HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEC------CCCCCC--------
T ss_conf 999998399999610599996---567999888787799999999998640277710421------567883--------
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEECCCC----------------CCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCC
Q ss_conf 2899999999999999628973524667----------------677999999999877885773003366643543010
Q gi|255764463|r 151 NDETIELISHAAVIQADAGADIIAPSEM----------------MDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGP 214 (337)
Q Consensus 151 ND~Tl~~L~k~Al~~A~AGaDivAPSdM----------------MDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgP 214 (337)
.....+.+-.+.+|||+.|-=-|- ..+.++.||.+.+..+=.++.|..
T Consensus 115 ----~~~v~~~v~~~~~aGa~gv~IED~~~~k~~~~~~~~~~i~~~~~~~~i~aa~~a~~~~d~~i~A------------ 178 (318)
T 1zlp_A 115 ----PLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVA------------ 178 (318)
T ss_dssp ----HHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEE------------
T ss_pred ----CCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEE------------
T ss_conf ----2069999999985311202210100244466432100346889999999887514786225676------------
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCH
Q ss_conf 1675310244677774431572114788988887664089879955311458999999962499899993461
Q gi|255764463|r 215 YRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSG 287 (337)
Q Consensus 215 FRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSG 287 (337)
+|-..--....|++..+..-.+-|||++++ |+++-.+.++.+.++...|+...-+.+
T Consensus 179 ---------------Rtd~~~~~~~~eai~Ra~a~~~AGAd~i~i-~~~~~~e~~~~~~~~~~~p~~~~~~~~ 235 (318)
T 1zlp_A 179 ---------------RTDARAPHGLEEGIRRANLYKEAGADATFV-EAPANVDELKEVSAKTKGLRIANMIEG 235 (318)
T ss_dssp ---------------EECTHHHHHHHHHHHHHHHHHHTTCSEEEE-CCCCSHHHHHHHHHHSCSEEEEEECTT
T ss_pred ---------------CCHHCCCCCHHHHHHHHHHHHHHHCCEEEE-ECCCCHHHHHHHHHHHCCCCCCCCCCC
T ss_conf ---------------410100378699999998878862676773-136888899999998536555400148
No 24
>>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 2.71A {Bacillus subtilis subsp} (A:)
Probab=85.49 E-value=2.4 Score=23.13 Aligned_cols=29 Identities=17% Similarity=0.178 Sum_probs=19.9
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEE-EECC
Q ss_conf 3288999999999999888936763-3025
Q gi|255764463|r 63 MRMSIDVAVEKIKQVADLGIPAIAI-FPNI 91 (337)
Q Consensus 63 ~R~Sid~L~~eie~~~~lGI~av~L-Fp~I 91 (337)
.+++.+.....++.+.++||..+=+ ||..
T Consensus 23 ~~~~~~~~~~i~~~l~~~Gv~~iEvg~~~~ 52 (307)
T 1ydo_A 23 VWIATEDKITWINQLSRTGLSYIEITSFVH 52 (307)
T ss_dssp SCCCHHHHHHHHHHHHTTTCSEEEEEECSC
T ss_pred CCCCHHHHHHHHHHHHHHCCCEEEECCCCC
T ss_conf 998999999999999981989899478758
No 25
>>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str} (X:)
Probab=84.93 E-value=3.1 Score=22.37 Aligned_cols=31 Identities=23% Similarity=0.371 Sum_probs=25.5
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEE-EECCC
Q ss_conf 63288999999999999888936763-30256
Q gi|255764463|r 62 VMRMSIDVAVEKIKQVADLGIPAIAI-FPNIP 92 (337)
Q Consensus 62 v~R~Sid~L~~eie~~~~lGI~av~L-Fp~I~ 92 (337)
-.++|.+..++.++.+.++|+..|-+ ||..+
T Consensus 21 ~~~~~~~~~~~i~~~l~~~Gv~~iEvg~~~~~ 52 (293)
T 3ewb_X 21 GVNFDVKEKIQIALQLEKLGIDVIEAGFPISS 52 (293)
T ss_dssp --CCCHHHHHHHHHHHHHHTCSEEEEECGGGC
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 99989999999999999839699999668788
No 26
>>3ez4_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; cytoplasm, magnesium, metal-binding, pantothenate biosynthesis; 2.10A {Burkholderia pseudomallei} (A:)
Probab=84.23 E-value=0.92 Score=25.93 Aligned_cols=164 Identities=12% Similarity=0.074 Sum_probs=84.8
Q ss_pred CCCCCCCHHHHHHHHCCCCC-------------HHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 56312898899986347788-------------87733116667589881104888786328899999999999988893
Q gi|255764463|r 17 MRRNRKSNWIREMVREHRLS-------------VSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIP 83 (337)
Q Consensus 17 ~RRlR~~~~iR~Lv~Et~Ls-------------~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~ 83 (337)
.+|++.-+.+|+|..+...- .+..=++...+-+... --.-+.|..-.++.++++..++...+.= +
T Consensus 6 ~~~~~~~~~lr~l~~~~~~i~~~~~~D~~sA~~~e~~g~~ai~~s~~~~-a~~~G~pD~~~~~~~e~~~~~~~I~~~~-~ 83 (269)
T 3ez4_A 6 HHHMVTVPKLQAMREAGEKIAMLTSYDASFAALLDRANVDVQLIGDSLG-NVLQGQATTLPVTLDDIAYHTACVARAQ-P 83 (269)
T ss_dssp --CCCCHHHHHHHHHHTCCEEEEECCSHHHHHHHHHTTCSEEEECTTHH-HHTTCCSSSTTCCHHHHHHHHHHHHHTC-C
T ss_pred CCCEEEHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEEECCHH-HHHCCCCCCHHHHHHHHHHHHHHHHHHC-C
T ss_conf 4306679999999848994899989899999999876999999957789-7317886722454555778889998527-7
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCH----------HHCCCCCCCCC---C---C
Q ss_conf 676330256334554454215765379999999997301447986133271----------00114310013---6---5
Q gi|255764463|r 84 AIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDP----------FTIHGHDGILC---D---G 147 (337)
Q Consensus 84 av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~----------YT~hGHcGi~~---~---g 147 (337)
.. | ++. + ++.|.. -++. -+.+.++.+-+.==.-+.|-|-.--. -..-+|.|.+. + +
T Consensus 84 ~~--p-ii~-D--~~~G~~-g~~~-~v~~~v~~~~~aGa~gi~iED~~~~~~~~~~~~~~~i~~~~~~~~i~a~~~a~~d 155 (269)
T 3ez4_A 84 RG--L-VVA-D--LPFGTY-GTPA-DAFASAVKLMRAGAQMVKLEGGEWLAETVRFLVERAVPVCAHVGLTPQSVHAFGG 155 (269)
T ss_dssp SS--E-EEE-E--CCTTSC-SSHH-HHHHHHHHHHHHTCSEEEEECSGGGHHHHHHHHHTTCCEEEEEC-----------
T ss_pred CC--E-EEE-C--CCCCCC-CCCH-HHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCC
T ss_conf 71--2-661-3--542113-5638-9999999999659877630453578899999998297477252005015655388
Q ss_pred CC---CHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHH
Q ss_conf 44---62899999999999999628973524667677999999999
Q gi|255764463|r 148 EI---VNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKL 190 (337)
Q Consensus 148 ~I---dND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~L 190 (337)
.+ -.|..++.+.+-+..|.+||||.|-+-..-+--...+.+.+
T Consensus 156 ~~i~aRtda~~~e~i~Ra~ay~eaGAd~i~~~~~~~~~~~~~~~~~ 201 (269)
T 3ez4_A 156 FKVQGKTEAGAAQLLRDARAVEEAGAQLIVLEAVPTLVAAEVTREL 201 (269)
T ss_dssp ---------CHHHHHHHHHHHHHHTCSEEEEESCCHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHC
T ss_conf 6031644888999999999998520145301354668999998418
No 27
>>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} (A:1-219)
Probab=83.77 E-value=3.5 Score=21.98 Aligned_cols=171 Identities=9% Similarity=0.051 Sum_probs=84.9
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCC
Q ss_conf 6328899999999999988893676330256334554454215765379999999997301-447986133271001143
Q gi|255764463|r 62 VMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGH 140 (337)
Q Consensus 62 v~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGH 140 (337)
-.+...+.+.+.++.+.+.|++.+.+++.+.+-.. +. ..=-.+.++...+..+ .+.||.-|.
T Consensus 27 dg~iD~~~~~~~i~~l~~~Gv~gl~~~G~tgE~~~-------Ls-~~Er~~l~~~~~~~~~~~~~vi~gv~--------- 89 (219)
T 1xky_A 27 NGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPT-------LT-SEEKVALYRHVVSVVDKRVPVIAGTG--------- 89 (219)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGG-------SC-HHHHHHHHHHHHHHHTTSSCEEEECC---------
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECEECCCHHH-------CC-HHHHHHHHHHHHHHHCCCCCEEEECC---------
T ss_conf 95949999999999999779998997865320665-------96-99999987768875035576675356---------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE--CCCCCCCHHHHHHHHHHH-CCCCCCCEECHHHHHHHHHHCCHHH
Q ss_conf 1001365446289999999999999962897352--466767799999999987-7885773003366643543010167
Q gi|255764463|r 141 DGILCDGEIVNDETIELISHAAVIQADAGADIIA--PSEMMDGRVQEIRKKLDS-HGHINVGIMPYVAKFNSSFYGPYRD 217 (337)
Q Consensus 141 cGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA--PSdMMDGrV~aIR~~Ld~-~g~~~~~ImsYsaKfaS~fYgPFRd 217 (337)
..+.+.-.+.|.-.+++|||.|. |-.+....-..|.+-+.. ..-.+.+|+=|-.-..
T Consensus 90 -----------~~st~~~i~~a~~a~~~Gad~i~v~pp~~~~~~~~~i~~~~~~i~~a~~~pi~iyn~P~~--------- 149 (219)
T 1xky_A 90 -----------SNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGR--------- 149 (219)
T ss_dssp -----------CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHH---------
T ss_pred -----------CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC---------
T ss_conf -----------422899999999999749999997799788989999999999996358997899967876---------
Q ss_pred HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHH
Q ss_conf 531024467777443157211478898888766408987995531145899999996249989999346189
Q gi|255764463|r 218 AISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEY 289 (337)
Q Consensus 218 A~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEY 289 (337)
..+.+.+ +....+.+=-.++.||=.-+-+.-+.++.....-.+..|.-++++
T Consensus 150 ------------~g~~~s~--------~~l~~L~~~~~ivgvK~~~~~~~~~~~~~~~~~~~~~i~~G~~~~ 201 (219)
T 1xky_A 150 ------------SIVQISV--------DTVVRLSEIENIVAIKDAGGDVLTMTEIIEKTADDFAVYSGDDGL 201 (219)
T ss_dssp ------------HSSCCCH--------HHHHHHHTSTTEEEEEECSSCHHHHHHHHHHSCTTCEEEESSGGG
T ss_pred ------------CCCCCCH--------HHHHHHCCCCCEEEEECCCCCHHHHHEEECCCCCCEEEEECCCCC
T ss_conf ------------5776598--------886532248998998414320334320000245766999575000
No 28
>>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} (A:1-204,A:341-569)
Probab=83.47 E-value=3.7 Score=21.85 Aligned_cols=161 Identities=14% Similarity=0.021 Sum_probs=93.8
Q ss_pred CCHHHCCCCEEEECCCCC-------EEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC------
Q ss_conf 888773311666758988-------1104888786328899999999999988893676330256334554454------
Q gi|255764463|r 35 LSVSDLILPIFLTSGEKT-------VESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGS------ 101 (337)
Q Consensus 35 Ls~~dLI~PiFV~eg~~~-------k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~Gs------ 101 (337)
...+..||-++|..=.+. ........-...-..+.+.+.+..+.++||++|.|-|+.+.......+.
T Consensus 80 ~~~~~~iY~~~v~~f~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~ylk~lGv~~i~l~P~~~~~~~~~~~~~~~gy~ 159 (433)
T 1gjw_A 80 WIKRSVVYGSLPRTTAAYNHKGSGYYEENDVLGFREAGTFFKMMLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYS 159 (433)
T ss_dssp GGGGCCEEEECHHHHTCCCTTSSSCCCSBCTTSCBCSCCHHHHHHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTS
T ss_pred HHHCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 66356699970456416899987655556665866786899999721999975998899699731787566776789887
Q ss_pred ----CCCC---------CCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf ----2157---------65379999999997301-447986133271001143100136544628999999999999996
Q gi|255764463|r 102 ----HIID---------PDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQAD 167 (337)
Q Consensus 102 ----eA~n---------~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~ 167 (337)
.+.+ +-|-+..-...|++.-. .|.||.|+.+..-..+.-=.-+-+-.-.|.+..+.+.+...-..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~g~~~e~~~lv~~~H~~Gi~Vi~D~V~NH~~~~~~w~~~~dln~~np~v~~~l~~~~~~w~~ 239 (433)
T 1gjw_A 160 VKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILDFIPPYVLYDVIKASKFPGKEPNRELWEYLAGVIPHYQK 239 (433)
T ss_dssp EEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEEECTCCCCHHHHCTTTSCCSSBCHHHHHHHTTHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 65777648443556544588999999999999987999999632332003333332146765438888878889887554
Q ss_pred -CCCCEE---ECCCCCCCHHHHHHHHHHHCCC
Q ss_conf -289735---2466767799999999987788
Q gi|255764463|r 168 -AGADII---APSEMMDGRVQEIRKKLDSHGH 195 (337)
Q Consensus 168 -AGaDiv---APSdMMDGrV~aIR~~Ld~~g~ 195 (337)
.|+|-. +..-|=-.-...+++.+.+.+-
T Consensus 240 ~~GVDGfR~D~a~~~~~~f~~~~~~~~~~~~~ 271 (433)
T 1gjw_A 240 KYGIDGARLDMGHALPKELLDLIIKNVKEYDP 271 (433)
T ss_dssp HHCCCEEEESSGGGSCHHHHHHHHHHHHHHCT
T ss_pred HCCCCCCCEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf 03665321001123537899999988640185
No 29
>>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} (A:)
Probab=83.43 E-value=2.4 Score=23.08 Aligned_cols=160 Identities=13% Similarity=0.039 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHCCCCEEEE----------E--ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCH
Q ss_conf 999999999999888936763----------3--0256334554454215765379999999997301447986133271
Q gi|255764463|r 67 IDVAVEKIKQVADLGIPAIAI----------F--PNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDP 134 (337)
Q Consensus 67 id~L~~eie~~~~lGI~av~L----------F--p~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~ 134 (337)
++.....++.+.+.|--.|-| | |..+ .-+|+.|-..-|---|....|++||+..|+..|..=+....
T Consensus 160 ~~~f~~AA~~A~~AGfDgVeih~ahG~Ll~qFlsp~~N-~RtDeYGGs~enR~Rf~~Eii~air~a~gd~~v~~R~~~~~ 238 (361)
T 3gka_A 160 VAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSAN-RRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRG 238 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTC-CCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTC
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHCCCCHHHEEEEECCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 87556888889862954022311332123302220236-64455787565534677888887776336663455403465
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCC
Q ss_conf 00114310013654462899999999999999628973524667677999999999877885773003366643543010
Q gi|255764463|r 135 FTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGP 214 (337)
Q Consensus 135 YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgP 214 (337)
+...|.. ++-..+.+....++|+|.+.+|...... |.-.+..-
T Consensus 239 ~~~~g~~-------------~~e~~~~a~~l~~~g~d~i~~~~~~~~~------------------------~~~~~~~~ 281 (361)
T 3gka_A 239 DAHTMGD-------------SDPAATFGHVARELGRRRIAFLFARESF------------------------GGDAIGQQ 281 (361)
T ss_dssp CSSSCCC-------------SCHHHHHHHHHHHHHHTTCSEEEEECCC------------------------STTCCHHH
T ss_pred CCCCCCC-------------CCHHHHHHHHHHHHCCCCCEEEEEECCC------------------------CCCCCHHH
T ss_conf 5234565-------------6629999999998576872089875566------------------------76530011
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCEEEE-CCCHHHHHHHHHHHHHC
Q ss_conf 167531024467777443157211478898888766408-987995-53114589999999624
Q gi|255764463|r 215 YRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQES-ADMLLV-KPGLPYLDVCFRIKEKF 276 (337)
Q Consensus 215 FRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EG-AD~lMV-KPa~~yLDii~~~k~~~ 276 (337)
.|.+ ..-+...|.- +++. .++..+++| +|+||+ +|.+..=|+++++++..
T Consensus 282 ~k~~-~~~~i~~g~~----~~~~-------~a~~~l~~g~~D~v~~~R~~iadP~l~~k~~~g~ 333 (361)
T 3gka_A 282 LKAA-FGGPFIVNEN----FTLD-------SAQAALDAGQADAVAWGKLFIANPDLPRRFKLNA 333 (361)
T ss_dssp HHHH-HCSCEEEESS----CCHH-------HHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTC
T ss_pred HHHC-CCCCEEEECC----CCHH-------HHHHHHHCCCCCEEHHHHHHHHCCCHHHHHHCCC
T ss_conf 1002-5977899899----8999-------9999998799756046699997917999997399
No 30
>>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A* (A:)
Probab=83.36 E-value=1.4 Score=24.75 Aligned_cols=24 Identities=4% Similarity=-0.026 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHCCCCEEECCCC
Q ss_conf 999999999999628973524667
Q gi|255764463|r 155 IELISHAAVIQADAGADIIAPSEM 178 (337)
Q Consensus 155 l~~L~k~Al~~A~AGaDivAPSdM 178 (337)
.+.+.+.+....++|+|.|.-.|+
T Consensus 168 ~~~~~~~~~~~~~~g~~~i~l~Dt 191 (337)
T 3ble_A 168 PDYVKSLVEHLSKEHIERIFLPDT 191 (337)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEECT
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 302456667787631233203634
No 31
>>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomics, NPPSFA; 2.00A {Geobacillus kaustophilus HTA426} (A:)
Probab=82.90 E-value=3.9 Score=21.71 Aligned_cols=172 Identities=12% Similarity=0.124 Sum_probs=92.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCC
Q ss_conf 88999999999999888936763302563345544542157653799999999973014479861332710011431001
Q gi|255764463|r 65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGIL 144 (337)
Q Consensus 65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~ 144 (337)
-+.+.+..++.++...|+..|=+= ++ ...+ .++..-+...+..|+...+++-++.. +-+...-|-.
T Consensus 29 ~~~~e~~~~~~~~~~~~~D~iE~R--lD-~~~~------~~~~~~i~~~i~~lr~~~~~~PiI~T-----~R~~~eGG~~ 94 (257)
T 2yr1_A 29 EDDRKVLREAEEVCRKQPDLLEWR--AD-FFRA------IDDQERVLATANGLRNIAGEIPILFT-----IRSEREGGQP 94 (257)
T ss_dssp SSHHHHHHHHHHHHHSCCSEEEEE--GG-GCTT------TTCHHHHHHHHHHHHHHSSSCCEEEE-----CCCTTTTCCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEE--EE-CCCC------CCCHHHHHHHHHHHHHHCCCCCEEEE-----EECHHHCCCC
T ss_conf 999999999999855699999998--42-3666------79899999999999974589978999-----9415447998
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCC-CCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCC
Q ss_conf 3654462899999999999999628-973524667677999999999877885773003366643543010167531024
Q gi|255764463|r 145 CDGEIVNDETIELISHAAVIQADAG-ADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRD 223 (337)
Q Consensus 145 ~~g~IdND~Tl~~L~k~Al~~A~AG-aDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p 223 (337)
.+ ++-++-+++|. ..++.| +|+|-=.--.+..+....+.+-..+ .-.|+||-
T Consensus 95 ~~--~~~~~~~~ll~----~~~~~~~~d~iDiEl~~~~~~~~~~~~~~~~~--~kiI~S~H------------------- 147 (257)
T 2yr1_A 95 IP--LNEAEVRRLIE----AICRSGAIDLVDYELAYGERIADVRRMTEECS--VWLVVSRH------------------- 147 (257)
T ss_dssp CS--SCHHHHHHHHH----HHHHHTCCSEEEEEGGGTTHHHHHHHHHHHTT--CEEEEEEE-------------------
T ss_pred CC--CCHHHHHHHHH----HHHHCCCCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEEE-------------------
T ss_conf 99--99999999999----88833897479755133124899999986369--77999874-------------------
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHH-CCCCEE-EECCCHHHHHHHH------HHHHHCCCCEEEEECC
Q ss_conf 4677774431572114788988887664-089879-9553114589999------9996249989999346
Q gi|255764463|r 224 LLKGDKKTYYLDPANVQEAIREASIDIQ-ESADML-LVKPGLPYLDVCF------RIKEKFGLPTFAYQVS 286 (337)
Q Consensus 224 ~~~gdr~sYQmd~~n~~eA~~e~~~D~~-EGAD~l-MVKPa~~yLDii~------~~k~~~~~P~~aYqVS 286 (337)
.| +..-..+.+.+.....+ -|||++ ++-++-..-|+.+ .+++..+.|+.+|.-.
T Consensus 148 ~f---------~~tp~~~~l~~~~~~~~~~gadivKia~~a~~~~D~l~ll~~~~~~~~~~~~p~i~~~MG 209 (257)
T 2yr1_A 148 YF---------DGTPRKETLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQATEEARRELAIPLITMAMG 209 (257)
T ss_dssp ES---------SCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHCSSCEEEEECT
T ss_pred CC---------CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 79---------999888999999999997379989999726998999999999999973469988999669
No 32
>>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, JCSG, PSI, protein structure initiative; HET: MCL; 1.80A {Thermotoga maritima} (A:)
Probab=82.50 E-value=3.5 Score=22.00 Aligned_cols=120 Identities=9% Similarity=0.088 Sum_probs=65.8
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCC
Q ss_conf 328899999999999988893676330256334554454215765379999999997301-4479861332710011431
Q gi|255764463|r 63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHD 141 (337)
Q Consensus 63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHc 141 (337)
.+.-.+.+.+.++.+.+.|++.+++++...+-. .++ ..=-.+.++...+..+ .+.|+.-+.
T Consensus 28 ~~iD~~~~~~~i~~l~~~Gv~gi~~~G~tGE~~-------~Lt-~~Er~~~~~~~~~~~~~~~~v~~g~~---------- 89 (306)
T 1o5k_A 28 GELDLESYERLVRYQLENGVNALIVLGTTGESP-------TVN-EDEREKLVSRTLEIVDGKIPVIVGAG---------- 89 (306)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEESSGGGTGG-------GCC-HHHHHHHHHHHHHHHTTSSCEEEECC----------
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECEECCCHH-------HCC-HHHHHHHHHHHHHHCCCCCCEEEECC----------
T ss_conf 978999999999999976999899674153420-------389-99999999999985568887898568----------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE---CCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHH
Q ss_conf 001365446289999999999999962897352---466767799999999987788577300336664354
Q gi|255764463|r 142 GILCDGEIVNDETIELISHAAVIQADAGADIIA---PSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSS 210 (337)
Q Consensus 142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA---PSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~ 210 (337)
..+.+...+.+....++|||.|. |.-.--..=+.++-.-+-..-.+.+|+=|-....|.
T Consensus 90 ----------~~~~~~~~~~a~~a~~~Gad~v~v~pP~~~~~s~~~i~~~~~~i~~a~~~pi~iY~~P~~~g 151 (306)
T 1o5k_A 90 ----------TNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTG 151 (306)
T ss_dssp ----------CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHS
T ss_pred ----------CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf ----------74399999999999966999999879999997999999999999970799789997863047
No 33
>>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A* (A:1-114,A:159-377)
Probab=82.03 E-value=4.2 Score=21.49 Aligned_cols=169 Identities=12% Similarity=0.053 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEEC-----------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHH
Q ss_conf 999999999999888936763302-----------563345544542157653799999999973014479861332710
Q gi|255764463|r 67 IDVAVEKIKQVADLGIPAIAIFPN-----------IPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPF 135 (337)
Q Consensus 67 id~L~~eie~~~~lGI~av~LFp~-----------I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~Y 135 (337)
++...+.++.+.+.|...|-|-.. ..+..+|..|..--|.-.++-+.+++||+..|+..|..-+....+
T Consensus 121 i~~f~~AA~~a~~aGfDgIeIh~ahGyLl~qFlsP~~N~R~d~yGg~lenR~r~~~eii~aVr~a~g~~~i~vr~~~~~~ 200 (333)
T 2r14_A 121 VEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLE 200 (333)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCC
T ss_pred HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECC
T ss_conf 99999999999984988531224556577788886357654544421312004688999999987386512324421102
Q ss_pred HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCH
Q ss_conf 01143100136544628999999999999996289735246676779999999998778857730033666435430101
Q gi|255764463|r 136 TIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPY 215 (337)
Q Consensus 136 T~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPF 215 (337)
... ..-..+++...+.+-...++|+|.+.-+.--- ....-.+.-.+...+
T Consensus 201 ~~~----------~~~~~~~~~~~~~~~~l~~~gi~~i~i~~~~~--------------------~~~~~~~~~~~~~~~ 250 (333)
T 2r14_A 201 LFG----------LTDDEPEAMAFYLAGELDRRGLAYLHFNEPDW--------------------IGGDITYPEGFREQM 250 (333)
T ss_dssp CTT----------CCCSCHHHHHHHHHHHHHHTTCSEEEEECCC--------------------------CCCTTHHHHH
T ss_pred CCC----------CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC--------------------CCCCCCCCHHHHHHH
T ss_conf 478----------76543588999875224224731778614764--------------------576632028899999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE-CCCHHHHHHHHHHHHHC
Q ss_conf 67531024467777443157211478898888766408987995-53114589999999624
Q gi|255764463|r 216 RDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLV-KPGLPYLDVCFRIKEKF 276 (337)
Q Consensus 216 RdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMV-KPa~~yLDii~~~k~~~ 276 (337)
|.+.+-.-...|+ +++....+++ .+.|+|+||+ .|.+.--|++.++++.-
T Consensus 251 ~~~~~ipvi~~G~-----i~~~~a~~~l------~~~~~D~V~igR~~ladP~l~~ki~~g~ 301 (333)
T 2r14_A 251 RQRFKGGLIYCGN-----YDAGRAQARL------DDNTADAVAFGRPFIANPDLPERFRLGA 301 (333)
T ss_dssp HHHCCSEEEEESS-----CCHHHHHHHH------HTTSCSEEEESHHHHHCTTHHHHHHHTC
T ss_pred HHHCCCCEEEECC-----CCHHHHHHHH------HCCCCCEEHHHHHHHHCCHHHHHHHCCC
T ss_conf 9872877899689-----3999999999------8699638535399887940999997399
No 34
>>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJM; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} (A:)
Probab=81.28 E-value=4.4 Score=21.32 Aligned_cols=208 Identities=13% Similarity=-0.004 Sum_probs=95.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEEEC-CCCCCCCCCCCCCCCCCC---HHHHHHHHHHHHHCCCEEEECCCCCH---HHC
Q ss_conf 88999999999999888936763302-563345544542157653---79999999997301447986133271---001
Q gi|255764463|r 65 MSIDVAVEKIKQVADLGIPAIAIFPN-IPMDLRNNTGSHIIDPDN---LINEGICAIKKNIPNIGIITDVALDP---FTI 137 (337)
Q Consensus 65 ~Sid~L~~eie~~~~lGI~av~LFp~-I~~~~Kd~~GseA~n~dg---lv~rAIr~IK~~fpdl~vi~DVcLc~---YT~ 137 (337)
..-+.++...+...+-|..-+..=.. +.+..+...+.-....+. ...+....+++..--+ +.-.+-.. .+.
T Consensus 36 ~~~~~~~~~~~~~A~gg~glii~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~h~~g~~~--~~ql~h~g~~~~~~ 113 (338)
T 1z41_A 36 KLTPFHXAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQGSKI--GIQLAHAGRKAELE 113 (338)
T ss_dssp CCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHHHHHHTTCEE--EEEEECCGGGCCCS
T ss_pred CCCHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCE--EHHHCCCCCCCCCC
T ss_conf 9999999999998658941999697787624256678643374888767778998853200011--00110188555667
Q ss_pred CCCCC--CC-CC---------CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHH
Q ss_conf 14310--01-36---------54462899999999999999628973524667677999999999877885773003366
Q gi|255764463|r 138 HGHDG--IL-CD---------GEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVA 205 (337)
Q Consensus 138 hGHcG--i~-~~---------g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsa 205 (337)
..... .. .. ..=+.+..++..+.-|....+||+|.|....--+.-... -|-.. .--..-
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~t~~ei~~ii~~f~~aa~~a~~aG~DgVeih~a~g~L~~q---flsp~------~n~r~d 184 (338)
T 1z41_A 114 GDIFAPSAIAFDEQSATPVEXSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHE---FLSPL------SNHRTD 184 (338)
T ss_dssp SCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHH---HHCTT------TCCCCS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHE---ECCCC------CCCCCC
T ss_conf 888899641046789878016999999999999999999998299868820052202102---23764------434554
Q ss_pred HHHHHHHCC----------HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE-----------CCCHH
Q ss_conf 643543010----------167531024467777443157211478898888766408987995-----------53114
Q gi|255764463|r 206 KFNSSFYGP----------YRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLV-----------KPGLP 264 (337)
Q Consensus 206 KfaS~fYgP----------FRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMV-----------KPa~~ 264 (337)
+|-+++-.- -|++++..-..+-.-..+.-+.....|.+.-+..=++.|+|.+-+ -|...
T Consensus 185 ~yGgsl~nr~r~~~eii~air~~~~~~~~i~~r~~~~~~~~~~~~e~~~~~~~l~~~g~~~i~~~~~~~~~~~~~~~~~~ 264 (338)
T 1z41_A 185 EYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWXKEQGVDLIDCSSGALVHADINVFPGY 264 (338)
T ss_dssp TTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 31036766578899988656551114745886442134787200436999999998498631122123345555578851
Q ss_pred HHHHHHHHHHHCCCCEEEE
Q ss_conf 5899999996249989999
Q gi|255764463|r 265 YLDVCFRIKEKFGLPTFAY 283 (337)
Q Consensus 265 yLDii~~~k~~~~~P~~aY 283 (337)
++++++.+|+.+..|+.+-
T Consensus 265 ~~~~~~~ir~~~~~pvi~~ 283 (338)
T 1z41_A 265 QVSFAEKIREQADXATGAV 283 (338)
T ss_dssp THHHHHHHHHHHCCEEEEC
T ss_pred CHHHHHHHHHHCCCEEEEE
T ss_conf 1689999998669409996
No 35
>>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.20A {Pyrococcus horikoshii OT3} (A:104-204)
Probab=80.89 E-value=4.6 Score=21.23 Aligned_cols=95 Identities=9% Similarity=0.130 Sum_probs=61.3
Q ss_pred HHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHH---HCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 999999987788577300336664354301016753---1024467-777443157211478898888766408987995
Q gi|255764463|r 184 QEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAI---STRDLLK-GDKKTYYLDPANVQEAIREASIDIQESADMLLV 259 (337)
Q Consensus 184 ~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~---~S~p~~~-gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMV 259 (337)
|++..+|..-|-..++|..|...-.-.+..=|++.- -+...+. ++-.--+.++....++++++. ++|||.+.+
T Consensus 1 Ga~~~al~~l~~~ri~V~py~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~adai~l 77 (101)
T 2eq5_A 1 GSSVSALALAYGRRVGVLNLTEETPKVIRSILGNNLIAEDHPSGVSNTLDLLTDWGRREVINAAKRLK---EKGVEVIAL 77 (101)
T ss_dssp HHHHHHHHHTTCSSEEEECSSSCCCHHHHHHHGGGEEEEECCTTCCSGGGGGSHHHHHHHHHHHHHHH---HTTCSEEEE
T ss_pred CHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH---HCCCCEEEE
T ss_conf 16789999972786356650462699999999874010134402210012457889999999999998---669988998
Q ss_pred C-CCHHHHHHHHHHHHHCCCCEE
Q ss_conf 5-311458999999962499899
Q gi|255764463|r 260 K-PGLPYLDVCFRIKEKFGLPTF 281 (337)
Q Consensus 260 K-Pa~~yLDii~~~k~~~~~P~~ 281 (337)
= -+|+-++++..+.+.+++||.
T Consensus 78 ~Ct~l~~~~~~~~Le~~lgvPVi 100 (101)
T 2eq5_A 78 GCTGMSTIGIAPVLEEEVGIPVI 100 (101)
T ss_dssp CCTHHHHHTCHHHHHHHHSSCEE
T ss_pred ECCCCCHHHHHHHHHHCCCCEEE
T ss_conf 06872025558988435898698
No 36
>>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} (A:1-111,A:154-364)
Probab=80.63 E-value=4.7 Score=21.17 Aligned_cols=168 Identities=10% Similarity=0.001 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEEC-----------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHH
Q ss_conf 999999999999888936763302-----------563345544542157653799999999973014479861332710
Q gi|255764463|r 67 IDVAVEKIKQVADLGIPAIAIFPN-----------IPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPF 135 (337)
Q Consensus 67 id~L~~eie~~~~lGI~av~LFp~-----------I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~Y 135 (337)
++......+.+.+.|...|-|-.. .+...+|+.|..-.|.-.++...|+++|+..++.-|-.=+.+..+
T Consensus 118 i~~f~~aA~~a~~aGfDgIei~~ahgyLl~qF~sP~~n~r~d~yGgsl~nr~r~~~eiI~avr~~~~~~pV~vKi~~~~~ 197 (322)
T 1vyr_A 118 VNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGT 197 (322)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSC
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCC
T ss_conf 99999999999870866376513671021223067666666544642113337678888876654046765302023234
Q ss_pred HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCH
Q ss_conf 01143100136544628999999999999996289735246676779999999998778857730033666435430101
Q gi|255764463|r 136 TIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPY 215 (337)
Q Consensus 136 T~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPF 215 (337)
..++.. ...|++.+.+.+.....++.+++.-|--.- +....-..+..+......-|+
T Consensus 198 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--------------~~~~~~~~~~~~~~~~~~~pv 254 (322)
T 1vyr_A 198 FQNVDN---------GPNEEADALYLIEELAKRGIAYLHMSETDL--------------AGGKPYSEAFRQKVRERFHGV 254 (322)
T ss_dssp BTTBCC---------CTTHHHHHHHHHHHHHHTTCSEEEEECCBT--------------TBCCCCCHHHHHHHHHHCCSE
T ss_pred CCCCCC---------CCCCHHHHHHHHHHHHHCCCEEEECCCCCC--------------CCCCCCCHHHHHHHHHHCCCE
T ss_conf 222000---------255178999999987742973741233763--------------357664488899889865844
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCEEEE-CCCHHHHHHHHHHHHHC
Q ss_conf 67531024467777443157211478898888766408-987995-53114589999999624
Q gi|255764463|r 216 RDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQES-ADMLLV-KPGLPYLDVCFRIKEKF 276 (337)
Q Consensus 216 RdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EG-AD~lMV-KPa~~yLDii~~~k~~~ 276 (337)
...||= .+..+| +.-++|| +|++|+ .|.+.--|+++++++..
T Consensus 255 --------i~~GgI-------~~~e~a----~~~l~~g~~D~V~igR~~ladP~l~~ki~~g~ 298 (322)
T 1vyr_A 255 --------IIGAGA-------YTAEKA----EDLIGKGLIDAVAFGRDYIANPDLVARLQKKA 298 (322)
T ss_dssp --------EEEESS-------CCHHHH----HHHHHTTSCSEEEESHHHHHCTTHHHHHHHTC
T ss_pred --------EEECCC-------CCHHHH----HHHHHCCCCCEEHHHHHHHHCCHHHHHHHHCC
T ss_conf --------996689-------999999----99998799745745599987948999998289
No 37
>>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A (A:)
Probab=80.50 E-value=2.6 Score=22.92 Aligned_cols=198 Identities=16% Similarity=0.136 Sum_probs=111.4
Q ss_pred HHHHHHCCCCEEEEEEC-CCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCC
Q ss_conf 99999888936763302-56334--5544542157653799999999973014479861332710011431001365446
Q gi|255764463|r 74 IKQVADLGIPAIAIFPN-IPMDL--RNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIV 150 (337)
Q Consensus 74 ie~~~~lGI~av~LFp~-I~~~~--Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~Id 150 (337)
..-+.+.|.+++.+=+. +.... .+..+.-.+ .-+...++.|.... ++-|+.|. ++|+.|
T Consensus 30 Ari~~~aG~~ai~~sg~~~a~~~~g~pd~~~~~~---~e~~~~~~~i~~a~-~~PiiaD~------d~G~~g-------- 91 (295)
T 1xg4_A 30 ALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTL---DDVLTDIRRITDVC-SLPLLVDA------DIGFGS-------- 91 (295)
T ss_dssp HHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCH---HHHHHHHHHHHHHC-CSCEEEEC------TTCSSS--------
T ss_pred HHHHHHCCCCEEEHHHHHHHHHCCCCCCCCCCCC---HHHHHHHHHHHHCC-CCCEEECC------CCCCCC--------
T ss_conf 9999983999996508999987379998775762---46678888775304-67701331------122343--------
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEECCC--------CCC--------CHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCC
Q ss_conf 289999999999999962897352466--------767--------7999999999877885773003366643543010
Q gi|255764463|r 151 NDETIELISHAAVIQADAGADIIAPSE--------MMD--------GRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGP 214 (337)
Q Consensus 151 ND~Tl~~L~k~Al~~A~AGaDivAPSd--------MMD--------GrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgP 214 (337)
+.+...+.+-.+.+|||+.|---| -++ +.++.|+.+.+..+-.++.|.
T Consensus 92 ---~~~~v~~~v~~l~~aGa~gv~iED~~~~k~~~~~~~~~~i~~~~~~~ki~aa~~a~~~~~~~i~------------- 155 (295)
T 1xg4_A 92 ---SAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIM------------- 155 (295)
T ss_dssp ---SHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEE-------------
T ss_pred ---CCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEE-------------
T ss_conf ---1238999999999679968873165354444556653321799999999999971589872347-------------
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHH---HH
Q ss_conf 167531024467777443157211478898888766408987995531145899999996249989999346189---99
Q gi|255764463|r 215 YRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEY---AM 291 (337)
Q Consensus 215 FRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEY---am 291 (337)
-+|-........|+++.+....+-|||++++ |+.+-.+.++.+.+....|+..-.+.+-. -.
T Consensus 156 --------------ARtda~~~~~~~eai~Ra~ay~~AGAd~i~i-~~~~~~e~~~~~~~~~~~p~~~~~~~~~~~~~~~ 220 (295)
T 1xg4_A 156 --------------ARTDALAVEGLDAAIERAQAYVEAGAEMLFP-EAITELAMYRQFADAVQVPILANITEFGATPLFT 220 (295)
T ss_dssp --------------EEECCHHHHCHHHHHHHHHHHHHTTCSEEEE-TTCCSHHHHHHHHHHHCSCBEEECCSSSSSCCCC
T ss_pred --------------ECCCCCCCCCHHHHHHHHHHHHHCCCCEEEE-CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCC
T ss_conf --------------6345533068899999999887569968984-5789999999999865998554346777886420
Q ss_pred HHHHHHCCC----------CCHHHHHHHHHHHHHHHCCC
Q ss_conf 999998889----------78899999999999772699
Q gi|255764463|r 292 IKAASLQGW----------INKNDAMMESLLAFKRAGCD 320 (337)
Q Consensus 292 i~~a~~~g~----------~d~~~~~~E~l~~~kRAGAd 320 (337)
+.-....|. ...-..+.+.+..+++.|-.
T Consensus 221 ~~el~~lg~~~v~~~~~~~~~~~~~~~~a~~~~~~~~~~ 259 (295)
T 1xg4_A 221 TDELRSAHVAMALYPLSAFRAMNRAAEHVYNVLRQEGTQ 259 (295)
T ss_dssp HHHHHHTTCSEEEESSHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 999996137688854199999999999999999981995
No 38
>>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicusatcc 33223} PDB: 3krz_A* (A:)
Probab=80.38 E-value=4.7 Score=21.12 Aligned_cols=213 Identities=12% Similarity=-0.032 Sum_probs=92.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEEECC-CCCCCCCC-CCCCCCCC--CHHHHHHHHHHHHHCCCEEEECC-----CCCHH
Q ss_conf 889999999999998889367633025-63345544-54215765--37999999999730144798613-----32710
Q gi|255764463|r 65 MSIDVAVEKIKQVADLGIPAIAIFPNI-PMDLRNNT-GSHIIDPD--NLINEGICAIKKNIPNIGIITDV-----ALDPF 135 (337)
Q Consensus 65 ~Sid~L~~eie~~~~lGI~av~LFp~I-~~~~Kd~~-GseA~n~d--glv~rAIr~IK~~fpdl~vi~DV-----cLc~Y 135 (337)
..-+.++...++..+-|..-+..-... .+...... .-..+++. ....+....+++... ....-.. ..+..
T Consensus 34 ~~~~~~~~~~~~~a~gg~gli~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~g~-~~~~ql~~~g~~~~~~~ 112 (343)
T 3kru_A 34 MPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIVDICKANGA-VMGIQLAHAGRKCNISY 112 (343)
T ss_dssp CCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHHHHHHHHHHHTTC-EEEEEEECCGGGCCCTT
T ss_pred CCCHHHHHHHHHHHCCCCEEEEECCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCCCCCCC
T ss_conf 99999999999997689649998137877232688876666748888888899999985699-04886623886655578
Q ss_pred HCCCCCCCCC------CC----CCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCC--C---CCCE
Q ss_conf 0114310013------65----446289999999999999962897352466767799999999987788--5---7730
Q gi|255764463|r 136 TIHGHDGILC------DG----EIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGH--I---NVGI 200 (337)
Q Consensus 136 T~hGHcGi~~------~g----~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~--~---~~~I 200 (337)
...+-..... .. .-+-...++.+++.|....+||.|.|--..=.+.-.. +-|--... + .-.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~aa~~a~~aGfdgvei~~~~gyl~~---qFlsp~~n~r~d~yGgsl 189 (343)
T 3kru_A 113 EDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIH---EFLSPLSNKRKDEYGNSI 189 (343)
T ss_dssp SCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHH---HHHCTTTCCCCSTTSSSH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHH---HHCCCCCCCCCCCCCCCH
T ss_conf 88768985424568888967999999999999999999887419888997403316899---813887788877667886
Q ss_pred ECHHHHHHHHHHCCHHHHHHCCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCEEEEC----------CCHHHHH
Q ss_conf 0336664354301016753102446777744---31572114788988887664089879955----------3114589
Q gi|255764463|r 201 MPYVAKFNSSFYGPYRDAISTRDLLKGDKKT---YYLDPANVQEAIREASIDIQESADMLLVK----------PGLPYLD 267 (337)
Q Consensus 201 msYsaKfaS~fYgPFRdA~~S~p~~~gdr~s---YQmd~~n~~eA~~e~~~D~~EGAD~lMVK----------Pa~~yLD 267 (337)
+.. ..|.-...---|++++..=.. |=|-+ ++-.-....+.+.-+..-.+.|+|.+.|- |...+++
T Consensus 190 ~nr-~r~~~eii~air~~~~~~~~v-~iR~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 267 (343)
T 3kru_A 190 ENR-ARFLIEVIDEVRKNWPENKPI-FVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNVDINLYPGYQVK 267 (343)
T ss_dssp HHH-THHHHHHHHHHHHTSCTTSCE-EEEEECCCSSTTSCCHHHHHHHHHHHTTTCSEEEEECCCSSCCCCCCCTTTTHH
T ss_pred HHH-HHHHHHHHHHHHHHHCCCCCE-EEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHH
T ss_conf 673-588999999997674157740-563251001468898799999999988634430220255545555777532167
Q ss_pred HHHHHHHHCCCCEEEE
Q ss_conf 9999996249989999
Q gi|255764463|r 268 VCFRIKEKFGLPTFAY 283 (337)
Q Consensus 268 ii~~~k~~~~~P~~aY 283 (337)
+++.+|+.+++|+.+=
T Consensus 268 ~~~~i~~~~~~pvi~~ 283 (343)
T 3kru_A 268 YAETIKKRCNIKTSAV 283 (343)
T ss_dssp HHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHCCCCEEEE
T ss_conf 9999999749888998
No 39
>>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A* (B:)
Probab=80.09 E-value=4.9 Score=21.05 Aligned_cols=26 Identities=23% Similarity=0.161 Sum_probs=15.6
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEC
Q ss_conf 62899999999999999628973524
Q gi|255764463|r 150 VNDETIELISHAAVIQADAGADIIAP 175 (337)
Q Consensus 150 dND~Tl~~L~k~Al~~A~AGaDivAP 175 (337)
+-++.++..++.|..-.+||.|.|--
T Consensus 165 eI~~ii~~f~~AA~~A~~AGfDgVEI 190 (402)
T 2hsa_B 165 EISQVVEDYRRSALNAIEAGFDGIEI 190 (402)
T ss_dssp GHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEC
T ss_conf 99999999999999998549527882
No 40
>>3ler_A DHDPS, dihydrodipicolinate synthase; TIM barrel, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: MCL MSE; 1.84A {Campylobacter jejuni subsp} (A:)
Probab=80.04 E-value=4.9 Score=21.05 Aligned_cols=82 Identities=13% Similarity=0.108 Sum_probs=41.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEECCCCCHHHCCCCC
Q ss_conf 28899999999999988893676330256334554454215765379999999997301--4479861332710011431
Q gi|255764463|r 64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP--NIGIITDVALDPFTIHGHD 141 (337)
Q Consensus 64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp--dl~vi~DVcLc~YT~hGHc 141 (337)
+...+.+.+.++.+.+.|+..+.+++...+-. +++ ..=-.+.++...+... .+.|++-|.
T Consensus 24 ~iD~~~~~~~i~~l~~~Gv~gi~~~Gs~GE~~-------~Ls-~~Er~~v~~~~~~~~~~~~~~vi~gv~---------- 85 (301)
T 3ler_A 24 KVDEQSYARLIKRQIENGIDAVVPVGTTGESA-------TLT-HEEHRTCIEIAVETCKGTKVKVLAGAG---------- 85 (301)
T ss_dssp EECHHHHHHHHHHHHTTTCCEEETTSTTTTGG-------GSC-HHHHHHHHHHHHHHHTTSSCEEEEECC----------
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECEECCCHH-------HCC-HHHHHHHHHHHHHHHCCCCCEEEEECC----------
T ss_conf 78999999999999975999899781220266-------589-999999999999985589982999788----------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 00136544628999999999999996289735
Q gi|255764463|r 142 GILCDGEIVNDETIELISHAAVIQADAGADII 173 (337)
Q Consensus 142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv 173 (337)
. .+.+...++|....++|||.|
T Consensus 86 ---~-------~~t~~~i~~a~~A~~~Gad~i 107 (301)
T 3ler_A 86 ---S-------NATHEAVGLAKFAKEHGADGI 107 (301)
T ss_dssp ---C-------SSHHHHHHHHHHHHHTTCSEE
T ss_pred ---C-------CHHHHHHHHHHHHHHCCCCEE
T ss_conf ---5-------209999999999997599988
No 41
>>3e02_A Uncharacterized protein DUF849; YP_555544.1, protein of unknown function (DUF849), structural genomics; HET: MSE; 1.90A {Burkholderia xenovorans LB400} (A:)
Probab=79.63 E-value=4.1 Score=21.56 Aligned_cols=80 Identities=19% Similarity=0.209 Sum_probs=56.5
Q ss_pred CCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 11666758988110488878632889999999999998889367633025633455-44542157653799999999973
Q gi|255764463|r 42 LPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRN-NTGSHIIDPDNLINEGICAIKKN 120 (337)
Q Consensus 42 ~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd-~~GseA~n~dglv~rAIr~IK~~ 120 (337)
.|++|+--.|....-+++--.-=++.+++.+++.++++.|-..|=|.+ +| ++|+.+++++ ..-.++..||+.
T Consensus 6 ~~~iI~aA~nGa~~~k~~~P~lP~TpeEia~~a~~c~~AGAsivHlH~------Rd~~dG~~s~d~~-~y~e~i~~IR~~ 78 (311)
T 3e02_A 6 KKIIITCAVTGSIHTPTXSPYLPITPEEIVKEGVAAAEAGAAXLHLHA------RDPLNGRPSQDPD-LFXRFLPQLKER 78 (311)
T ss_dssp SSBCEEEECSCSSSCGGGCTTSCCSHHHHHHHHHHHHHHTCSEEEECE------ECTTTCCEECCHH-HHTTTHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE------CCCCCCCCCCCHH-HHHHHHHHHHHH
T ss_conf 868999867799697011999989989999999999982874899885------5898989068999-999999999975
Q ss_pred HCCCEEEE
Q ss_conf 01447986
Q gi|255764463|r 121 IPNIGIIT 128 (337)
Q Consensus 121 fpdl~vi~ 128 (337)
.|.|+-+|
T Consensus 79 ~~~ii~~T 86 (311)
T 3e02_A 79 TDAILNIT 86 (311)
T ss_dssp CCCEEEEC
T ss_pred CCCEEEEE
T ss_conf 99358752
No 42
>>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} (A:)
Probab=79.45 E-value=5.1 Score=20.92 Aligned_cols=166 Identities=9% Similarity=-0.010 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHCCCCEEEEEE----------C-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHH
Q ss_conf 9999999999988893676330----------2-5633455445421576537999999999730144798613327100
Q gi|255764463|r 68 DVAVEKIKQVADLGIPAIAIFP----------N-IPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFT 136 (337)
Q Consensus 68 d~L~~eie~~~~lGI~av~LFp----------~-I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT 136 (337)
+.....++.+.+.|.-.|-|-. . ..+..+|+.|..--|.--++...+++|++..|+..|..=+....+-
T Consensus 167 ~~f~~aA~~a~~AGfDgVeih~a~gyLl~qflsp~~N~R~D~yGGslenR~r~~~eii~~ir~~~g~~~v~vr~~~~~~~ 246 (376)
T 1icp_A 167 NEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHY 246 (376)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCT
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHC
T ss_conf 99999999999729886773003531043153787786468689956665899999999999865987268996022213
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHH
Q ss_conf 11431001365446289999999999999962897352466767799999999987788577300336664354301016
Q gi|255764463|r 137 IHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYR 216 (337)
Q Consensus 137 ~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFR 216 (337)
..|.. +.+.....+....++|+|++.-|.-.-- ....+...++.+|=
T Consensus 247 ~~~~~------------~~e~~~~~~~~~e~~g~d~l~v~~~~~~---------------------~~~~~~~~~~~~~~ 293 (376)
T 1icp_A 247 NEAGD------------TNPTALGLYMVESLNKYDLAYCHVVEPR---------------------MKTAWEKIECTESL 293 (376)
T ss_dssp TTCCC------------SCHHHHHHHHHHHHGGGCCSEEEEECCS---------------------CCC------CCCCS
T ss_pred CCCCC------------CCHHHHHHHHHHHHCCCCEEEEEEECCC---------------------CCCCCCCCCCHHHH
T ss_conf 67888------------6289999999875457744678874487---------------------66677754327899
Q ss_pred HH---HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCEEEE-CCCHHHHHHHHHHHHHCC
Q ss_conf 75---31024467777443157211478898888766408-987995-531145899999996249
Q gi|255764463|r 217 DA---ISTRDLLKGDKKTYYLDPANVQEAIREASIDIQES-ADMLLV-KPGLPYLDVCFRIKEKFG 277 (337)
Q Consensus 217 dA---~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EG-AD~lMV-KPa~~yLDii~~~k~~~~ 277 (337)
.. +.+-|-..|+-.|. -.++.-+++| +|+||+ .|.+..=|+.+++++.-.
T Consensus 294 ~~i~~~~~~~v~~g~i~t~-----------e~a~~~l~~g~~D~V~~gR~~ladP~l~~k~~~g~~ 348 (376)
T 1icp_A 294 VPMRKAYKGTFIVAGGYDR-----------EDGNRALIEDRADLVAYGRLFISNPDLPKRFELNAP 348 (376)
T ss_dssp HHHHHHCCSCEEEESSCCH-----------HHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCC
T ss_pred HHHHHHCCCCEEEECCCCH-----------HHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHCCCC
T ss_conf 9998635888899799898-----------999999986996641652998879229999971999
No 43
>>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthesis, lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A (A:)
Probab=78.82 E-value=4.9 Score=21.04 Aligned_cols=125 Identities=9% Similarity=-0.021 Sum_probs=71.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEECCCCCHHHC
Q ss_conf 878632889999999999998889367633025633455445421576537999999999730-1447986133271001
Q gi|255764463|r 59 MPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI-PNIGIITDVALDPFTI 137 (337)
Q Consensus 59 MPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f-pdl~vi~DVcLc~YT~ 137 (337)
+-...+...+.+.+.++.+.+.|+.++.+++...+-..= + ..=-.+.++...+.. +++.|+.-|.
T Consensus 13 f~~d~~ID~~~~~~~i~~l~~~Gv~gi~~~GstGE~~~L-------t-~~Er~~l~~~~~~~~~~~~~ii~gv~------ 78 (292)
T 2ojp_A 13 MDEKGNVXRASLKKLIDYHVASGTSAIVSVGTTGESATL-------N-HDEHADVVMMTLDLADGRIPVIAGTG------ 78 (292)
T ss_dssp BCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGS-------C-HHHHHHHHHHHHHHHTTSSCEEEECC------
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEECEECCCHHHC-------C-HHHHHHHHHHHHHHCCCHHHEEECCC------
T ss_conf 889978799999999999997699989968526432138-------9-99999997767544033011220122------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC--EEECCCCCC-CHHHHHHHHHHHCCCCCCCEECHHHHHHHHH
Q ss_conf 1431001365446289999999999999962897--352466767-7999999999877885773003366643543
Q gi|255764463|r 138 HGHDGILCDGEIVNDETIELISHAAVIQADAGAD--IIAPSEMMD-GRVQEIRKKLDSHGHINVGIMPYVAKFNSSF 211 (337)
Q Consensus 138 hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaD--ivAPSdMMD-GrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~f 211 (337)
| .+.+.-.+.|-...++|+| +|.|-...- ..=+.++-.-.-..-.+.+|+=|..-..+.+
T Consensus 79 --~------------~s~~~~ie~a~~a~~~Gad~vlv~~P~~~~~~~~~i~~~~~~ia~a~~~pi~iYn~P~~~g~ 141 (292)
T 2ojp_A 79 --A------------NATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGC 141 (292)
T ss_dssp --C------------SSHHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSC
T ss_pred --C------------CCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
T ss_conf --3------------10688999876688639964176078788989999999999972158996899963565575
No 44
>>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} (A:1-199)
Probab=78.60 E-value=3.1 Score=22.42 Aligned_cols=46 Identities=24% Similarity=0.402 Sum_probs=33.0
Q ss_pred HHHHHHHHHHCCCCEEEC-----CC-CCCC--HHHHHHHHHHHCCCCCCCEECHH
Q ss_conf 999999999628973524-----66-7677--99999999987788577300336
Q gi|255764463|r 158 ISHAAVIQADAGADIIAP-----SE-MMDG--RVQEIRKKLDSHGHINVGIMPYV 204 (337)
Q Consensus 158 L~k~Al~~A~AGaDivAP-----Sd-MMDG--rV~aIR~~Ld~~g~~~~~ImsYs 204 (337)
=..||+.-|+|||++|+| .+ .-|| .+..|++.++.+|+. +-||.=|
T Consensus 120 s~~Qa~~aa~Aga~~ispyvgRi~~~~~~g~~~i~~~~~~~~~~~~~-tkil~AS 173 (199)
T 1wx0_A 120 SANQALLAARAGASYVSPFLGRVDDISWDGGELLREIVEMIQVQDLP-VKVIAAS 173 (199)
T ss_dssp SHHHHHHHHHTTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHTTCS-CEEEEBC
T ss_pred CHHHHHHHHHCCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHCCCC-CCEEEEC
T ss_conf 89999999983996999740012202468477999999999831887-3157504
No 45
>>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, pyruvate, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti} (A:1-236)
Probab=78.40 E-value=5.5 Score=20.71 Aligned_cols=166 Identities=9% Similarity=-0.015 Sum_probs=87.9
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCCC
Q ss_conf 28899999999999988893676330256334554454215765379999999997301-44798613327100114310
Q gi|255764463|r 64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHDG 142 (337)
Q Consensus 64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHcG 142 (337)
+...+.+.+.++.+.+.|++.+.+++.+.+-.. ++ ..=-.+.++...+..+ ++-|+.-|.
T Consensus 17 ~iD~~~~~~~~~~l~~~Gv~gi~~~GstGE~~~-------lt-~~Er~~l~~~~~~~~~~~~~ii~gv~----------- 77 (236)
T 2vc6_A 17 RIDEVALHDLVEWQIEEGSFGLVPCGTTGESPT-------LS-KSEHEQVVEITIKTANGRVPVIAGAG----------- 77 (236)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEETTSGGGTGGG-------SC-HHHHHHHHHHHHHHHTTSSCBEEECC-----------
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECEECCCHHH-------CC-HHHHHHHHHHHHHHCCCCCCEEEECC-----------
T ss_conf 819999999999999779999997515631435-------89-99999999999987079861897468-----------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE--CCCCC----CCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHH
Q ss_conf 01365446289999999999999962897352--46676----7799999999987788577300336664354301016
Q gi|255764463|r 143 ILCDGEIVNDETIELISHAAVIQADAGADIIA--PSEMM----DGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYR 216 (337)
Q Consensus 143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA--PSdMM----DGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFR 216 (337)
+.+.+...++|-..+++|+|.|- |-..- ++.+...|...+. .+.+|+=|
T Consensus 78 ---------~~s~~~~i~~a~~a~~~G~d~v~v~pP~~~~~~~~~i~~~~~~ia~a---~~~piiiy------------- 132 (236)
T 2vc6_A 78 ---------SNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAA---STIPIIVY------------- 132 (236)
T ss_dssp ---------CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH---CSSCEEEE-------------
T ss_pred ---------CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHCCC---CCCEEEEE-------------
T ss_conf ---------74068999999999976999999869988899999999999986014---56438999-------------
Q ss_pred HHHHCCCCCCCCCCCCCCCCCHHH-HHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHH
Q ss_conf 753102446777744315721147-8898888766408987995531145899999996249989999346189
Q gi|255764463|r 217 DAISTRDLLKGDKKTYYLDPANVQ-EAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEY 289 (337)
Q Consensus 217 dA~~S~p~~~gdr~sYQmd~~n~~-eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEY 289 (337)
+.+..... -.......=..+.-.++.+|-+.+-..-..++....+-.+..|.-.+|+
T Consensus 133 ----------------~~P~~~g~~~~~~~l~~l~~~~~~v~giK~~~~~~~~~~~~~~~~~~~~~v~~g~d~~ 190 (236)
T 2vc6_A 133 ----------------NIPGRSAIEIHVETLARIFEDCPNVKGVXDATGNLLRPSLERMACGEDFNLLTGEDGT 190 (236)
T ss_dssp ----------------ECHHHHSCCCCHHHHHHHHHHCTTEEEEEECSCCTHHHHHHHHHSCTTSEEEESCGGG
T ss_pred ----------------ECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEECCCCHHH
T ss_conf ----------------5022335435399999875013340332034507889999998634570124686378
No 46
>>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} (A:1-294)
Probab=78.24 E-value=5.5 Score=20.68 Aligned_cols=220 Identities=12% Similarity=0.033 Sum_probs=144.1
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCC
Q ss_conf 99999999999888936763302563345544542157--6537999999999730144798613327100114310013
Q gi|255764463|r 68 DVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIID--PDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILC 145 (337)
Q Consensus 68 d~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n--~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~ 145 (337)
+.+.+.-+.-++.|-.-+.-+-. .......+...+. -.-+..+|++..++...+..|..+| .||.+-.+ .
T Consensus 44 ~~v~~~H~~yl~AGAdii~TnTy--~a~~~~l~~~~~~~~~~el~~~av~lA~~a~~~~~Vagsi--gp~g~~~~----~ 115 (294)
T 1q7z_A 44 DVVLKVHRSYIESGSDVILTNTF--GATRMKLRKHGLEDKLDPIVRNAVRIARRAAGEKLVFGDI--GPTGELPY----P 115 (294)
T ss_dssp HHHHHHHHHHHHHTCSEEECSCT--TCSHHHHGGGTCGGGHHHHHHHHHHHHHHHHTTSEEEEEE--CCCSCCBT----T
T ss_pred HHHHHHHHHHHHHCCCEEEECCH--HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEC--CCCCCCCC----C
T ss_conf 99999999999971999994287--7659999986948899999999999999985668188652--75436788----6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC-HHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCC
Q ss_conf 654462899999999999999628973524667677-9999999998778857730033666435430101675310244
Q gi|255764463|r 146 DGEIVNDETIELISHAAVIQADAGADIIAPSEMMDG-RVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDL 224 (337)
Q Consensus 146 ~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDG-rV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~ 224 (337)
.+.+.-++-.+....|+-.++++|+|+++---|.+- .+.++.+++.+.+..---+.|.+
T Consensus 116 ~~~~t~~~~~~~~~~~i~~l~~~gvD~i~~ET~~~~~E~~~~~~~~~~~~~~~p~~~s~~-------------------- 175 (294)
T 1q7z_A 116 LGSTLFEEFYENFRETVEIMVEEGVDGIIFETFSDILELKAAVLAAREVSRDVFLIAHMT-------------------- 175 (294)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHTTCSEEEEEEECCHHHHHHHHHHHHHHCSSSCEEEEEC--------------------
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEE--------------------
T ss_conf 667518999999999999875469878998510058889999999998465465137999--------------------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECC---CHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCC
Q ss_conf 6777744315721147889888876640898799553---1145899999996249989999346189999999988897
Q gi|255764463|r 225 LKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKP---GLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWI 301 (337)
Q Consensus 225 ~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKP---a~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~ 301 (337)
+ +....-++=....+++..+. +.|+|.++|-= .-.-+.++..+++....|+.+|--+|+=- ......|.
T Consensus 176 ~--~~~g~l~~G~~~~~~~~~~~---~~~~~~iGiNC~~~p~~~~~~l~~~~~~~~~~l~~yPN~g~~~---~~~~~~~~ 247 (294)
T 1q7z_A 176 F--DEKGRSLTGTDPANFAITFD---ELDIDALGINCSLGPEEILPIFQELSQYTDKFLVVEPNAGKPI---VENGKTVY 247 (294)
T ss_dssp C--CTTSCCTTSCCHHHHHHHHH---TSSCSEEEEESSSCHHHHHHHHHHHHHTCCSEEEEECCSSSCE---EETTEEEC
T ss_pred E--CCCCCCCCCCCHHHHHHHHH---CCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC---CCCCCCCC
T ss_conf 7--79997168886899999873---2685301012576834888999976531567641357899970---05786016
Q ss_pred C-HHHHHHHHHHHHHHHCCCEEE
Q ss_conf 8-899999999999772699998
Q gi|255764463|r 302 N-KNDAMMESLLAFKRAGCDGIF 323 (337)
Q Consensus 302 d-~~~~~~E~l~~~kRAGAd~Ii 323 (337)
+ ....+-+....+..+|+.+|=
T Consensus 248 ~~~p~~~~~~~~~~~~~G~~iiG 270 (294)
T 1q7z_A 248 PLKPHDFAVHIDSYYELGVNIFG 270 (294)
T ss_dssp CCCHHHHHTTHHHHHHTTCSEEC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEC
T ss_conf 79989999999999985998882
No 47
>>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small molecule metabolism, PSI-II, NYSGXRC, structural genomics; 1.95A {Sinorhizobium meliloti 1021} (A:140-226)
Probab=77.32 E-value=5.8 Score=20.51 Aligned_cols=52 Identities=10% Similarity=-0.024 Sum_probs=42.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 889999999999998889367633025633455445421576537999999999730144798613
Q gi|255764463|r 65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDV 130 (337)
Q Consensus 65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DV 130 (337)
-+.+.+.+++++..+.|.++|-+=++.+.+ .| .+.++++++.+||+-++.|.
T Consensus 7 ~~~~~~~~~a~~~~~~G~~~~Kik~g~~~~-~d-------------~~~i~avr~~~gd~~l~vD~ 58 (87)
T 2pgw_A 7 ETAEELARDAAVGHAQGERVFYLKVGRGEK-LD-------------LEITAAVRGEIGDARLRLDA 58 (87)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECCSCHH-HH-------------HHHHHHHHTTSTTCEEEEEC
T ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCCCCCC-HH-------------HHHHHHHHHHCCCCEEEEEC
T ss_conf 222110478887640231001122223320-24-------------56777899867981799823
No 48
>>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum} (A:1-221)
Probab=77.27 E-value=5.9 Score=20.50 Aligned_cols=160 Identities=15% Similarity=0.112 Sum_probs=76.9
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCC
Q ss_conf 6328899999999999988893676330256334554454215765379999999997301-447986133271001143
Q gi|255764463|r 62 VMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGH 140 (337)
Q Consensus 62 v~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGH 140 (337)
..++..+.+.+.++.+.+.|++++.+.+...+-.. ++ ..--.+.++...+..+ ++-|++-+.-
T Consensus 31 d~~iD~~~~~~~i~~l~~~Gv~gi~v~GstGE~~~-------Ls-~~Er~~l~~~~~~~~~~~~~ii~gv~~-------- 94 (221)
T 3cpr_A 31 SGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPT-------TT-AAEKLELLKAVREEVGDRAKLIAGVGT-------- 94 (221)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTT-------SC-HHHHHHHHHHHHHHHTTTSEEEEECCC--------
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECEECHHHHH-------CC-HHHHHHHHHHHHHHHCCCCCEEECCCC--------
T ss_conf 95939999999999999779998997844200324-------89-999999999999983688767742675--------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE--CCCCC----CCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCC
Q ss_conf 1001365446289999999999999962897352--46676----77999999999877885773003366643543010
Q gi|255764463|r 141 DGILCDGEIVNDETIELISHAAVIQADAGADIIA--PSEMM----DGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGP 214 (337)
Q Consensus 141 cGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA--PSdMM----DGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgP 214 (337)
.+.+...++|-...++|+|.|. |...- ++-+...++..+. .+++|+=|
T Consensus 95 ------------~~t~~~i~~a~~a~~~Gad~vll~~P~~~~~~~~~~~~~~~~v~~~---~~~pi~iY----------- 148 (221)
T 3cpr_A 95 ------------NNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAA---TEVPICLY----------- 148 (221)
T ss_dssp ------------SCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH---CCSCEEEE-----------
T ss_pred ------------CHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH---CCCCEEEE-----------
T ss_conf ------------2199999999999974989999778757898999999999999866---38981320-----------
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 1675310244677774431572114788988887664089879955311458999999962499899
Q gi|255764463|r 215 YRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTF 281 (337)
Q Consensus 215 FRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~ 281 (337)
+.+.+....--.+....+.+=--++-+|=+-+-+.-+.++.+..++.+.
T Consensus 149 ------------------n~P~~~g~~~~~~~~~~L~~~~~i~giK~~~~~~~~~~~~~~~~~~~v~ 197 (221)
T 3cpr_A 149 ------------------DIPGRSGIPIESDTMRRLSELPTILAVXDAKGDLVAATSLIKETGLAWY 197 (221)
T ss_dssp ------------------ECHHHHSSCCCHHHHHHHTTSTTEEEEEECSCCHHHHHHHHHHHCCEEE
T ss_pred ------------------CCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCEEEE
T ss_conf ------------------3764348888899999985389866613688789999999763002551
No 49
>>1eh9_A Glycosyltrehalose trehalohydrolase; alpha/beta barrel, calcium binding, covalent dimer,; 3.00A {Sulfolobus solfataricus} (A:85-308,A:364-491)
Probab=76.84 E-value=6 Score=20.42 Aligned_cols=171 Identities=17% Similarity=0.211 Sum_probs=99.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC-----CCCCC----CHHHHHHHHHHHHHCCCEEEECCCCCHHH
Q ss_conf 8999999999999888936763302563345544542-----15765----37999999999730144798613327100
Q gi|255764463|r 66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSH-----IIDPD----NLINEGICAIKKNIPNIGIITDVALDPFT 136 (337)
Q Consensus 66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~Gse-----A~n~d----glv~rAIr~IK~~fpdl~vi~DVcLc~YT 136 (337)
.++.+.+.+..+.++||++|-|-|+.+.......|-. +.|+. .-..+.|+++++. .|.||.|+..-.-.
T Consensus 33 ~~~gl~e~Ldyl~~lGi~~V~L~Pi~~~~~~~~~GY~~~d~~~id~~~Gt~eelk~lI~~aH~~--GI~VilDvV~NH~s 110 (352)
T 1eh9_A 33 TFEGVIRKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKK--GLGVILDVVYNHVG 110 (352)
T ss_dssp SHHHHHHTHHHHHHHTCCEEEECCCBCCSSSCCCSTTCCCTTCBCSTTCCHHHHHHHHHHHHHT--TCEEEEEECCSCCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEEEEECCCCC
T ss_conf 9899998748999749975996986768877889988675566788899999999999999876--99899985025667
Q ss_pred -------------CCCCC----CCCCCCCCCHHHHHHHHHHHHHHHHHC-CCCEE---ECC----CCCCCHHHHHHHHHH
Q ss_conf -------------11431----001365446289999999999999962-89735---246----676779999999998
Q gi|255764463|r 137 -------------IHGHD----GILCDGEIVNDETIELISHAAVIQADA-GADII---APS----EMMDGRVQEIRKKLD 191 (337)
Q Consensus 137 -------------~hGHc----Gi~~~g~IdND~Tl~~L~k~Al~~A~A-GaDiv---APS----dMMDGrV~aIR~~Ld 191 (337)
...+- +......-.|.+..+.+.+.+.-..+. |+|.+ +-. +-...-...+++.+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~np~V~~~l~d~l~~Wl~~~GIDGfRlDav~~i~~~~~~~~l~el~~~~~ 190 (352)
T 1eh9_A 111 PEGNYMVKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWIKEYNVDGFRLDAVHAIIDTSPKHILEEIADVVH 190 (352)
T ss_dssp SSSCCHHHHSCCSCSSCCCSSSCCCCSSSTTHHHHHHHHHHHHHHHHHHSCCCCEEETTGGGCCCCSSSCHHHHHHHHHH
T ss_pred CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCHHHHHHHHHHHHH
T ss_conf 88726765588644457899868778888688999999999999999973998799803664312333777999999987
Q ss_pred HCCCC--------CCCEECHHHHHHHHH--------------HCCHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf 77885--------773003366643543--------------01016753102446777744315721147
Q gi|255764463|r 192 SHGHI--------NVGIMPYVAKFNSSF--------------YGPYRDAISTRDLLKGDKKTYYLDPANVQ 240 (337)
Q Consensus 192 ~~g~~--------~~~ImsYsaKfaS~f--------------YgPFRdA~~S~p~~~gdr~sYQmd~~n~~ 240 (337)
..+.. +..+++....-.-.| |-.=-|-+|... + |||-+-..+|...+
T Consensus 191 ~~~~~~i~E~~~~~~~~~~~~~~~g~~fd~~~~~~~~~~~~~~~~~hdq~~~r~-~-g~r~~~~~~~~~~~ 259 (352)
T 1eh9_A 191 KYNRIVIAESDLNDPRVVNPKEKCGYNIDAQWVDLDGCNFVVYIQNHDQVGNRG-K-GERIIKLVDRESYK 259 (352)
T ss_dssp HTTCCEEECCCSCCTTTTSCGGGTCCCCSEEECHCCGGGEECCSCCHHHHHTTT-T-CCCGGGGSCHHHHH
T ss_pred HCCCCEEEECCCCCCCEECHHHHCCCEEEEECCCCCCHHHEEHHHCCCCCCCCC-C-CCHHHHHHCHHHHH
T ss_conf 338301100124785443434626724444416357212100300578435588-7-42133430788999
No 50
>>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A (A:126-371)
Probab=76.53 E-value=6.1 Score=20.37 Aligned_cols=141 Identities=12% Similarity=0.053 Sum_probs=75.3
Q ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECC
Q ss_conf 81104888786328899999999999988893676330256334554454215765379999999997301-44798613
Q gi|255764463|r 52 TVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDV 130 (337)
Q Consensus 52 ~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DV 130 (337)
.+.|+-.--+.+.-+.+.+.+++++..+.|.++|-+-.+.+.-. -..+.++++++.++ ++.++.|.
T Consensus 7 ~~v~~yas~~~~~~~~~~~~~~~~~~~~~G~~~~K~k~g~~~~~-------------~d~~~i~a~r~~~g~~~~l~vDa 73 (246)
T 2ovl_A 7 PVVPVYAGGIDLELPVADLKTQADRFLAGGFRAIKXKVGRPDLK-------------EDVDRVSALREHLGDSFPLXVDA 73 (246)
T ss_dssp SEEEEEEECCBTTSCHHHHHHHHHHHHHTTCSCEEEECCCSSHH-------------HHHHHHHHHHHHHCTTSCEEEEC
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHH-------------HHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 54023114666431067788888888743553343035753178-------------99999999876548204335544
Q ss_pred C--------------------------CCHHHCCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCH
Q ss_conf 3--------------------------27100114310013--6544628999999999999996289735246676779
Q gi|255764463|r 131 A--------------------------LDPFTIHGHDGILC--DGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGR 182 (337)
Q Consensus 131 c--------------------------Lc~YT~hGHcGi~~--~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGr 182 (337)
. +.+-+-.||-=+-. .-.|-.|+++..+...--...+-.+|+|-|-=+--|-
T Consensus 74 n~~~t~~~A~~~~~~l~~~~~~~~EeP~~~~d~~~~~~l~~~~~~pia~~E~~~~~~~~~~~~~~~~~d~i~~d~~~~GG 153 (246)
T 2ovl_A 74 NXKWTVDGAIRAARALAPFDLHWIEEPTIPDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGG 153 (246)
T ss_dssp TTCSCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTS
T ss_pred HCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 24768999999999740229757744665300221333432023333478634562145554421764110678010485
Q ss_pred HHHHHHHHHHCCCCCCCEECHHH
Q ss_conf 99999999877885773003366
Q gi|255764463|r 183 VQEIRKKLDSHGHINVGIMPYVA 205 (337)
Q Consensus 183 V~aIR~~Ld~~g~~~~~ImsYsa 205 (337)
+...++..+...-.++.++.++.
T Consensus 154 it~~~~i~~~A~~~gi~~~~h~~ 176 (246)
T 2ovl_A 154 YTTFRKVAALAEANNXLLTSHGV 176 (246)
T ss_dssp HHHHHHHHHHHHHTTCCEEECSC
T ss_pred HHHHHHHHHHHHHCCCEEEECCH
T ss_conf 87776679999986998980488
No 51
>>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406} (A:)
Probab=76.52 E-value=6.1 Score=20.36 Aligned_cols=38 Identities=13% Similarity=0.313 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHCCCCEEECCCCCC--------CHHHHHHHHH
Q ss_conf 9999999999999962897352466767--------7999999999
Q gi|255764463|r 153 ETIELISHAAVIQADAGADIIAPSEMMD--------GRVQEIRKKL 190 (337)
Q Consensus 153 ~Tl~~L~k~Al~~A~AGaDivAPSdMMD--------GrV~aIR~~L 190 (337)
.+.+.+.+.+....++|+|+|.-.||.- ..|..+|+.+
T Consensus 148 ~~~~~~~~~~~~~~~~g~~~i~l~Dt~G~~~P~~~~~lv~~l~~~~ 193 (325)
T 3eeg_A 148 ADQAFLARXVEAVIEAGADVVNIPDTTGYXLPWQYGERIKYLXDNV 193 (325)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCCCEECHHHHHHHHHHHHHH
T ss_conf 0699999999999984998999515566553116788999998730
No 52
>>1oya_A OLD yellow enzyme; oxidoreductase (flavoprotein); HET: FMN; 2.00A {Saccharomyces pastorianus} (A:1-120,A:164-351)
Probab=76.45 E-value=6.2 Score=20.35 Aligned_cols=37 Identities=14% Similarity=0.100 Sum_probs=15.5
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCC
Q ss_conf 5544542157653799999999973014479861332
Q gi|255764463|r 96 RNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVAL 132 (337)
Q Consensus 96 Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcL 132 (337)
+|..|..-.|.--++...++.+|+..|++.|.+-+..
T Consensus 168 ~d~~G~~l~~r~r~~~eii~~vr~a~~~~pV~vKi~~ 204 (308)
T 1oya_A 168 TDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSP 204 (308)
T ss_dssp CSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECT
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 7767987888768999999999997187757999772
No 53
>>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus} (A:)
Probab=76.00 E-value=6.3 Score=20.27 Aligned_cols=78 Identities=18% Similarity=0.145 Sum_probs=55.7
Q ss_pred CCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 11666758988110488878632889999999999998889367633025633455-44542157653799999999973
Q gi|255764463|r 42 LPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRN-NTGSHIIDPDNLINEGICAIKKN 120 (337)
Q Consensus 42 ~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd-~~GseA~n~dglv~rAIr~IK~~ 120 (337)
-|++|+--.|....-+++--.-=++.+++.+++.++++.|-..+-|. -+| ++|+.+++++ ..-.++..||+.
T Consensus 6 ~~viItaA~nGa~~~k~~~P~lP~TpeEia~~A~~c~~AGAsivHlH------~Rdp~dG~~s~d~~-~y~eii~~Ir~~ 78 (314)
T 3lot_A 6 DVVIVTCAITGAIHTPSXSPYLPVTPDQIVEEAVKAAEAGAGXVHIH------ARDPKDGRPTTDVE-VFRYICREIKKQ 78 (314)
T ss_dssp CEECEEEECSCSSSCGGGCTTSCCSHHHHHHHHHHHHHHTCSEEEEC------EECTTTCCEECCHH-HHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE------ECCCCCCCCCCCHH-HHHHHHHHHHHC
T ss_conf 92899977789979701189998999999999999998256389977------25777898178989-999999999861
Q ss_pred HCCCEE
Q ss_conf 014479
Q gi|255764463|r 121 IPNIGI 126 (337)
Q Consensus 121 fpdl~v 126 (337)
.|-++-
T Consensus 79 ~d~ii~ 84 (314)
T 3lot_A 79 SDVVIN 84 (314)
T ss_dssp CCCEEE
T ss_pred CCCEEE
T ss_conf 897799
No 54
>>1wdd_A Ribulose bisphosphate carboxylase large chain; rubisco, photosynthesis, alpha/beta barrel, N- methylmethionine, post-translational modification; HET: KCX CAP; 1.35A {Oryza sativa} (A:148-301,A:372-477)
Probab=76.00 E-value=6.3 Score=20.27 Aligned_cols=110 Identities=15% Similarity=0.102 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999999999628973524667677999999999877885773003366643543010167531024467777443
Q gi|255764463|r 153 ETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTY 232 (337)
Q Consensus 153 ~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sY 232 (337)
-|-+.+++++..++..|.|+|= |.++..+-+-+.+.-.+.-+ .+|+.-+-.-.|-++.|
T Consensus 33 Lsp~~~a~~~ye~~~GGiDfIK----------------DDE~l~nqpf~p~~eRv~av-----~eai~kA~~eTGe~k~y 91 (260)
T 1wdd_A 33 LSAKNYGRACYECLRGGLDFTX----------------DDENVNSQPFMRWRDRFVFC-----AEAIYKSQAETGEIKGH 91 (260)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEE----------------CCTTCSSBTTBCHHHHHHHH-----HHHHHHHHHHHSSCCEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEC----------------CCCCCCCCCCCCHHHHHHHH-----HHHHHHHHHHHCCEEEE
T ss_conf 8989999999999715887211----------------66445787778614789999-----99999999844681499
Q ss_pred CCCCCHH-HHHH-HHHHHHHHCCCCEEEECCCHHHHHHHHHHH---HHCCCCEEEE
Q ss_conf 1572114-7889-888876640898799553114589999999---6249989999
Q gi|255764463|r 233 YLDPANV-QEAI-REASIDIQESADMLLVKPGLPYLDVCFRIK---EKFGLPTFAY 283 (337)
Q Consensus 233 Qmd~~n~-~eA~-~e~~~D~~EGAD~lMVKPa~~yLDii~~~k---~~~~~P~~aY 283 (337)
-.+.... .|-+ +..+.=.++|+.++||-+-.-=+..+..++ +.+.+|+-+.
T Consensus 92 ~~NiTa~~~E~m~rrae~a~e~Ga~~vMvd~l~~Gfsa~~sLa~~~R~~gl~LH~H 147 (260)
T 1wdd_A 92 YLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIH 147 (260)
T ss_dssp EEECCCSSHHHHHHHHHHHHHHTCSEEEEEHHHHCHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEC
T ss_conf 99668899999999999999749978998134550889999999753338367755
No 55
>>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A (A:)
Probab=75.17 E-value=6.6 Score=20.13 Aligned_cols=84 Identities=12% Similarity=0.211 Sum_probs=49.8
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCC
Q ss_conf 328899999999999988893676330256334554454215765379999999997301-4479861332710011431
Q gi|255764463|r 63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHD 141 (337)
Q Consensus 63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHc 141 (337)
.+...+.+.+.++.+.+.|+..+.+++...+-. +++ ..=-.+.++...+..+ .+-|++-|.-
T Consensus 24 ~~ID~~~~~~~~~~l~~~G~~gi~~~GstGE~~-------~Lt-~eEr~~li~~~~~~~~~~~~vi~gv~~--------- 86 (309)
T 3fkr_A 24 GDLDLASQKRAVDFMIDAGSDGLCILANFSEQF-------AIT-DDERDVLTRTILEHVAGRVPVIVTTSH--------- 86 (309)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGG-------GSC-HHHHHHHHHHHHHHHTTSSCEEEECCC---------
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECEECCCHH-------HCC-HHHHHHHHHHHHHHCCCCCEEEEECCC---------
T ss_conf 795999999999999975999899783534546-------479-999999999999970698618983687---------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 001365446289999999999999962897352
Q gi|255764463|r 142 GILCDGEIVNDETIELISHAAVIQADAGADIIA 174 (337)
Q Consensus 142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA 174 (337)
.+.+...+.+....++|||.|.
T Consensus 87 -----------~~t~~~i~~a~~a~~~Gad~v~ 108 (309)
T 3fkr_A 87 -----------YSTQVCAARSLRAQQLGAAMVM 108 (309)
T ss_dssp -----------SSHHHHHHHHHHHHHTTCSEEE
T ss_pred -----------CCHHHHHHHHHHHHHCCCCEEE
T ss_conf -----------8689999999996214997899
No 56
>>2pmq_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, isomerase, PSI-2, protein structure initiative; HET: MSE; 1.72A {Roseovarius SP} (A:125-356)
Probab=75.10 E-value=6.5 Score=20.21 Aligned_cols=140 Identities=14% Similarity=0.004 Sum_probs=87.3
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--CCCEEEE
Q ss_conf 88110488878632889999999999998889367633025633455445421576537999999999730--1447986
Q gi|255764463|r 51 KTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI--PNIGIIT 128 (337)
Q Consensus 51 ~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f--pdl~vi~ 128 (337)
..++.|+.---+.-.+.+.+.++++++.+.|.++|-+=.+.+.-.+|. +.|+++++.+ |++-++.
T Consensus 4 ~~r~~i~~~~~~~~~~~e~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~-------------~~i~~~~~~~g~~~~~l~v 70 (232)
T 2pmq_A 4 ALTDSVSSYYSLGVXEPDEAARQALEKQREGYSRLQVKLGARPIEIDI-------------EAIRKVWEAVRGTGIALAA 70 (232)
T ss_dssp CSCSEEECEEEECSCCHHHHHHHHHHHHHHTCSEEEEECCSSCHHHHH-------------HHHHHHHHHHTTSCCEEEE
T ss_pred CCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECHHHHHH-------------HHHHHHHCCCCCCCEEEEE
T ss_conf 233332013320246825779999999975997112330000245655-------------5555432136776459888
Q ss_pred CCC--------------C---------CHHHCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHH
Q ss_conf 133--------------2---------71001143100136--5446289999999999999962897352466767799
Q gi|255764463|r 129 DVA--------------L---------DPFTIHGHDGILCD--GEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRV 183 (337)
Q Consensus 129 DVc--------------L---------c~YT~hGHcGi~~~--g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV 183 (337)
|.. | .+.+..||--+-.. --|-.|+++..+....-....-.+|++-|-=+--|-+
T Consensus 71 Dan~~~~~~~A~~~~~~l~~~~iE~p~~~~~~~~~~~l~~~~~~pia~dE~~~~~~~~~~~~~~~~~d~~~~~~~~~GGi 150 (232)
T 2pmq_A 71 DGNRGWTTRDALRFSRECPDIPFVXEQPCNSFEDLEAIRPLCHHALYXDEDGTSLNTVITAAATSLVDGFGXKVSRIGGL 150 (232)
T ss_dssp ECTTCCCHHHHHHHHHHCTTSCEEEESCSSSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEECCBHHHHTSH
T ss_pred ECCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCC
T ss_conf 53777531246788898742101011345651023330123322111234556630224444202101111344446764
Q ss_pred HHHHHHHHHCCCCCCCEECH
Q ss_conf 99999998778857730033
Q gi|255764463|r 184 QEIRKKLDSHGHINVGIMPY 203 (337)
Q Consensus 184 ~aIR~~Ld~~g~~~~~ImsY 203 (337)
...++..+...-.++.++.+
T Consensus 151 ~~~~~i~~~a~~~gi~~~~~ 170 (232)
T 2pmq_A 151 QHXRAFRDFCAARNLPHTCD 170 (232)
T ss_dssp HHHHHHHHHHHHHTCCEECB
T ss_pred CHHHHHHHHHHHCCCCEEEC
T ss_conf 21577889987069718868
No 57
>>1xxx_A DHDPS, dihydrodipicolinate synthase; DAPA, RV2753C, lysine biosynthesis, structural genomics, PSI protein structure initiative; 2.28A {Mycobacterium tuberculosis} (A:1-219)
Probab=75.00 E-value=6.7 Score=20.10 Aligned_cols=183 Identities=12% Similarity=0.122 Sum_probs=83.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCCC
Q ss_conf 28899999999999988893676330256334554454215765379999999997301-44798613327100114310
Q gi|255764463|r 64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHDG 142 (337)
Q Consensus 64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHcG 142 (337)
..-.+.+.+.++.+.+.|++.+.+++...+-.. ++. .=-.+.++...+..+ ++-|++-+.
T Consensus 31 ~iD~~~~~~~i~~~~~~Gv~gi~v~GstGE~~~-------Lt~-~Er~~~~~~~~~~~~~~~~vi~gv~----------- 91 (219)
T 1xxx_A 31 SLDTATAARLANHLVDQGCDGLVVSGTTGESPT-------TTD-GEKIELLRAVLEAVGDRARVIAGAG----------- 91 (219)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEESSTTTTTTT-------SCH-HHHHHHHHHHHHHHTTTSEEEEECC-----------
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECEECCCHHH-------CCH-HHHHHHHHHHHHHHCCCCCEEECCC-----------
T ss_conf 919999999999999779998997863530655-------889-9999999999998404564453354-----------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE--ECCCCCCCHHHHHHHHH-HHCCCCCCCEECHHHHHHHHHHCCHHHHH
Q ss_conf 0136544628999999999999996289735--24667677999999999-87788577300336664354301016753
Q gi|255764463|r 143 ILCDGEIVNDETIELISHAAVIQADAGADII--APSEMMDGRVQEIRKKL-DSHGHINVGIMPYVAKFNSSFYGPYRDAI 219 (337)
Q Consensus 143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv--APSdMMDGrV~aIR~~L-d~~g~~~~~ImsYsaKfaS~fYgPFRdA~ 219 (337)
..+.+.-.+.+-...++|||.+ .|...--..-..|.+.+ +-..-.+.+|+=|-...
T Consensus 92 ---------~~st~~ai~~a~~a~~~Gad~v~v~pP~~~~~~~~~i~~~~~~i~~a~~~pi~iYn~P~------------ 150 (219)
T 1xxx_A 92 ---------TYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPG------------ 150 (219)
T ss_dssp ---------CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHH------------
T ss_pred ---------CHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC------------
T ss_conf ---------30278899999999982579199948988998999999999999972599789997864------------
Q ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCC
Q ss_conf 10244677774431572114788988887664089879955311458999999962499899993461899999999888
Q gi|255764463|r 220 STRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQG 299 (337)
Q Consensus 220 ~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g 299 (337)
+.-+.+.+ +....+.|=--++-+|=+.+.+.-+.++++.-++.+++ |
T Consensus 151 ---------~tg~~ls~--------~~~~~L~~~~~ivgiK~~~~~~~~~~~~~~~~~~~i~~----------------G 197 (219)
T 1xxx_A 151 ---------RSAVPIEP--------DTIRALASHPNIVGVKDAKADLHSGAQIMADTGLAYYS----------------G 197 (219)
T ss_dssp ---------HHSSCCCH--------HHHHHHHTSTTEEEEEECSCCHHHHHHHHHHHCCEEEE----------------C
T ss_pred ---------CCCCCCCH--------HHHHHHCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCC----------------C
T ss_conf ---------35777787--------89999705899301133421199998651035655467----------------7
Q ss_pred CCCHHHHHHHHHHHHHHHCCCEEEECH
Q ss_conf 978899999999999772699998201
Q gi|255764463|r 300 WINKNDAMMESLLAFKRAGCDGIFTYF 326 (337)
Q Consensus 300 ~~d~~~~~~E~l~~~kRAGAd~IitY~ 326 (337)
+ + +.+....++|++..+|=.
T Consensus 198 ~---d----~~~~~~~~~G~~G~is~~ 217 (219)
T 1xxx_A 198 D---D----ALNLPWLAMGATGFISVI 217 (219)
T ss_dssp S---G----GGHHHHHHHTCCEEEEST
T ss_pred C---H----HHCCHHHHCCCCCCCCCH
T ss_conf 3---1----210215531400113203
No 58
>>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, manic, transferase; HET: 680; 1.83A {Bacillus anthracis str} (A:)
Probab=74.81 E-value=6.8 Score=20.07 Aligned_cols=215 Identities=15% Similarity=0.086 Sum_probs=99.8
Q ss_pred CEEECCCCCC-----CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf 8110488878-----63288999999999999888936763302563345544542157653799999999973014479
Q gi|255764463|r 52 TVESINSMPD-----VMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGI 126 (337)
Q Consensus 52 ~k~~I~SMPG-----v~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~v 126 (337)
+-..|...|. ....+.+.+++.+++..+.|-.-|-+=+ . +...+..--..-.+-.-+..+|+.+++.+. +-|
T Consensus 42 I~giiN~tp~sf~d~~~~~d~~~~~~~a~~~~~~GAdiIDig~-~-st~P~~~~v~~~~E~~rl~~vi~~i~~~~~-~pi 118 (297)
T 1tx2_A 42 IMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGG-E-STRPGFAKVSVEEEIKRVVPMIQAVSKEVK-LPI 118 (297)
T ss_dssp EEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEES-C-C----CCCCCHHHHHHHHHHHHHHHHHHSC-SCE
T ss_pred EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC-C-CCCCCCCCCCHHHHHHHHHHHHHHHHCCCC-CEE
T ss_conf 9999828999999987588999999999999987998999788-3-546533147757789898889998640355-136
Q ss_pred EECCCCCHHHCCCCCCCCCC-CCCCHHHHHHH-HHHHHHHHHHCCCCEEECCCCCCC----HHHH-------HHHHHHHC
Q ss_conf 86133271001143100136-54462899999-999999999628973524667677----9999-------99999877
Q gi|255764463|r 127 ITDVALDPFTIHGHDGILCD-GEIVNDETIEL-ISHAAVIQADAGADIIAPSEMMDG----RVQE-------IRKKLDSH 193 (337)
Q Consensus 127 i~DVcLc~YT~hGHcGi~~~-g~IdND~Tl~~-L~k~Al~~A~AGaDivAPSdMMDG----rV~a-------IR~~Ld~~ 193 (337)
++|.|...=.---+.. -.+.||-|-+. ..+++-.-++.|+-+|.....=+| .+.. .-+.|.+.
T Consensus 119 ----sIDT~~~~v~e~al~~G~~iINsisg~~~~~~~~~l~~~~~~~vV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (297)
T 1tx2_A 119 ----SIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDA 194 (297)
T ss_dssp ----EEECSCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred ----EEEEECHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf ----5552228988889665964887475211014689998650435221343221123212220157899999999986
Q ss_pred CCCCC-CE----EC---HHHHHHHHHHCCHHHHHHCCCCCCC-CCCCC-----CCCCCHHH-HHHHHHHHHHHCCCCEEE
Q ss_conf 88577-30----03---3666435430101675310244677-77443-----15721147-889888876640898799
Q gi|255764463|r 194 GHINV-GI----MP---YVAKFNSSFYGPYRDAISTRDLLKG-DKKTY-----YLDPANVQ-EAIREASIDIQESADMLL 258 (337)
Q Consensus 194 g~~~~-~I----ms---YsaKfaS~fYgPFRdA~~S~p~~~g-dr~sY-----Qmd~~n~~-eA~~e~~~D~~EGAD~lM 258 (337)
|...- .| +- +.....-.++--.|.----.|.+.| .|+|+ -.+++.+- ..+.....-..-||+|+-
T Consensus 195 Gi~~~~IiiDPg~g~~k~~~~~~~~~~~~~~~~~~~~Pil~G~Srks~i~~~~~~~~~~~l~~t~~~~~~~~~~ga~Iir 274 (297)
T 1tx2_A 195 GVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVR 274 (297)
T ss_dssp TCCGGGEEEECCTTSSCCHHHHHHHHHTGGGGGGGCSCBEEECTTCHHHHHHHTCCGGGCHHHHHHHHHHHHHTTCSEEE
T ss_pred CCCHHHEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 99899974266667662088878998530411125775353112999998873899788437999999999987999999
Q ss_pred E---CCCHHHHHHHHHHH
Q ss_conf 5---53114589999999
Q gi|255764463|r 259 V---KPGLPYLDVCFRIK 273 (337)
Q Consensus 259 V---KPa~~yLDii~~~k 273 (337)
| ++...-+++...+.
T Consensus 275 ~hdv~~~~~a~~~~~~l~ 292 (297)
T 1tx2_A 275 VHDVKEMSRMAKMMDAMI 292 (297)
T ss_dssp ESCHHHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHHH
T ss_conf 698899999999999998
No 59
>>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} (A:)
Probab=74.67 E-value=6.8 Score=20.05 Aligned_cols=181 Identities=12% Similarity=-0.026 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCC----------C-CCCCHHHHHHHHHHHHHHHHHCCCCEEECCC
Q ss_conf 7999999999730144798613327100114310013----------6-5446289999999999999962897352466
Q gi|255764463|r 109 LINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILC----------D-GEIVNDETIELISHAAVIQADAGADIIAPSE 177 (337)
Q Consensus 109 lv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~----------~-g~IdND~Tl~~L~k~Al~~A~AGaDivAPSd 177 (337)
-..++++.+++.-+ -+.+.|+-+.++...|.-++-. + ...|...|....++ .+.++|||.|.-+-
T Consensus 25 ~~~~~~~~i~~~~~-~v~~~k~~~~~~~~~g~~~i~~l~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~gaD~vtvh~ 100 (245)
T 1eix_A 25 NRDDALAFVDKIDP-RDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVA---AAADLGVWMVNVHA 100 (245)
T ss_dssp SHHHHHHHHTTSCT-TTCEEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEEECSCHHHHHHHHH---HHHHHTCSEEEEBG
T ss_pred CHHHHHHHHHHCCC-CCEEEEECHHHHHHCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHH---HHHHCCCCEEEECC
T ss_conf 99999999996389-614999678999864899999999659852443100147846999999---99854899999863
Q ss_pred CCC-CHHHHHHHHHHHCCCCC--CCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHH-HHHHHHHHCC
Q ss_conf 767-79999999998778857--7300336664354301016753102446777744315721147889-8888766408
Q gi|255764463|r 178 MMD-GRVQEIRKKLDSHGHIN--VGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAI-REASIDIQES 253 (337)
Q Consensus 178 MMD-GrV~aIR~~Ld~~g~~~--~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~-~e~~~D~~EG 253 (337)
-|. ..+....+...+.+... ...++... ..|+.+.... + ......+-+ .....-.+-|
T Consensus 101 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-----~-------~~~~~~~~v~~~~~~~~~~G 162 (245)
T 1eix_A 101 SGGARMMTAAREALVPFGKDAPLLIAVTVLT------SMEASDLVDL-----G-------MTLSPADYAERLAALTQKCG 162 (245)
T ss_dssp GGCHHHHHHHHHTTGGGGGGCCEEEEECSCT------TCCHHHHHTT-----T-------CCSCHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHCCCCCEEEEEECCC------CCCHHHHHHH-----C-------CCCCHHHHHHHHHHHHHHCC
T ss_conf 3799999999999998287776599986589------9998999974-----4-------37889999999999899809
Q ss_pred CCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 98799553114589999999624998999934618999999998889788999999999997726999982
Q gi|255764463|r 254 ADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFT 324 (337)
Q Consensus 254 AD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~Iit 324 (337)
+|.+-+-| ...+-++++++....++...--+... ...|. .-.+.....+.+|||+|+-
T Consensus 163 ~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~-----~~~~~~~~~~~~Ga~~ivv 220 (245)
T 1eix_A 163 LDGVVCSA--QEAVRFKQVFGQEFKLVTPGIRPQGS------EAGDQ-----RRIMTPEQALSAGVDYMVI 220 (245)
T ss_dssp CSEEECCG--GGHHHHHHHHCSSSEEEECCBCCTTC------CCTTC-----CSCBCHHHHHHTTCSEEEE
T ss_pred CCEEEECH--HHHHHHHHHHCCCCEEECCCCCCCCC------CCCCC-----CCCCCHHHHHHCCCCEEEE
T ss_conf 99899788--78999998725455588047575454------54887-----7747999999859999998
No 60
>>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* (A:1-178,A:254-644)
Probab=74.29 E-value=7 Score=19.99 Aligned_cols=109 Identities=10% Similarity=0.183 Sum_probs=69.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCH------------HHHHHHHHHHHHCCCEEEECC
Q ss_conf 32889999999999998889367633025633455445421576537------------999999999730144798613
Q gi|255764463|r 63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNL------------INEGICAIKKNIPNIGIITDV 130 (337)
Q Consensus 63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dgl------------v~rAIr~IK~~fpdl~vi~DV 130 (337)
+..+...+.+.+..+.++|+++|-|-|+.+.. +.. +...|++.++ ..+.|.++++. .|.||.||
T Consensus 101 ~~g~~~~~~~~l~~l~~lG~~~i~l~p~~~~~-~~~-~~~~y~~~~~~~~~~~~g~~~~~~~~v~~~h~~--gi~v~~D~ 176 (569)
T 3czg_A 101 FAGTLQGVAERVPYLQELGVRYLHLLPFLRAR-AGD-NDGGFAVSDYGQVEPSLGSNDDLVALTSRLREA--GISLCADF 176 (569)
T ss_dssp HHSSHHHHHHTHHHHHHHTCCEEEECCCBCBC-SSC-CTTTTSBSCTTSBCGGGCCHHHHHHHHHHHHHT--TCEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCC-CCC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEEEE
T ss_conf 68589999985589997299989979887689-888-999828656677572349999999999999987--99899997
Q ss_pred CC-------------CHHHCCCCCCCCCC-----------CCCCHHHHHHHHHHHHHHHHHCCCCEEEC
Q ss_conf 32-------------71001143100136-----------54462899999999999999628973524
Q gi|255764463|r 131 AL-------------DPFTIHGHDGILCD-----------GEIVNDETIELISHAAVIQADAGADIIAP 175 (337)
Q Consensus 131 cL-------------c~YT~hGHcGi~~~-----------g~IdND~Tl~~L~k~Al~~A~AGaDivAP 175 (337)
.+ .-+-+.|=||.--| ...+..++.+.|.+..-..-..+-|++.-
T Consensus 177 v~~np~Vr~~i~~~l~~Wld~GVDGFRlDav~~l~k~~~~~~~n~~~~~~~l~~~~~~~~~~~~~~~~v 245 (569)
T 3czg_A 177 VLSNPAVFGDXALAXLRLANLGVEAFRLDSTAYLWKRIGTDCXNQSEAHTLLVALRAVTDIVAPAVVXK 245 (569)
T ss_dssp CCTSHHHHHHHHHHHHHHHHTTEEEEEEETGGGSCCCTTSCSSSCHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf 886678888887651467662456123233332013556532223221255555565443107982477
No 61
>>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural genomics of infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A (A:1-270)
Probab=73.45 E-value=7.3 Score=19.85 Aligned_cols=187 Identities=14% Similarity=0.129 Sum_probs=99.2
Q ss_pred HHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHH
Q ss_conf 99999888936763302563345544542157653799999999973014479861332710011431001365446289
Q gi|255764463|r 74 IKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDE 153 (337)
Q Consensus 74 ie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~ 153 (337)
..-+.+.|...+.+.+.-.....-- .+...-+-+-+...++.|....+ +-++.|.= .|..
T Consensus 42 A~~~~~~g~d~i~~~~~~~~~~~g~-~d~~~~~~~~~~~~~~~i~~~~~-~p~ivd~~------~g~~------------ 101 (270)
T 3ih1_A 42 ALVARNTGFLALYLSGAAYTASKGL-PDLGIVTSTEVAERARDLVRATD-LPVLVDID------TGFG------------ 101 (270)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHTC-CSSSCSCHHHHHHHHHHHHHHHC-CCEEEECT------TCSS------------
T ss_pred HHHHHHCCCCEEEECHHHHHHHCCC-CCCCCCCHHHHHHHHHHHHHHCC-CCEEEECC------CCCC------------
T ss_conf 9999985999999857999985899-99874679999999999986428-97588788------8999------------
Q ss_pred HHHHHHHHHHHHHHCCCCEEE-----CCCC---CC--------CHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHH
Q ss_conf 999999999999962897352-----4667---67--------7999999999877885773003366643543010167
Q gi|255764463|r 154 TIELISHAAVIQADAGADIIA-----PSEM---MD--------GRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRD 217 (337)
Q Consensus 154 Tl~~L~k~Al~~A~AGaDivA-----PSdM---MD--------GrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRd 217 (337)
+.+.+.+.+-...++|+|.|- |... +. +.++.|+.+++.. .+..|..
T Consensus 102 ~~~~~~~~a~~~~~~Ga~~I~ie~~~~~~~~~~~~g~~li~~~~~~~~i~aa~~~~--~~~~v~a--------------- 164 (270)
T 3ih1_A 102 GVLNVARTAVEXVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVA--PSLYIVA--------------- 164 (270)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHC--TTSEEEE---------------
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--CCCEEEE---------------
T ss_conf 88999999999997597089723355655445656654415999999999999738--9828998---------------
Q ss_pred HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
Q ss_conf 53102446777744315721147889888876640898799553114589999999624998999934618999999998
Q gi|255764463|r 218 AISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASL 297 (337)
Q Consensus 218 A~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~ 297 (337)
||--....+..+++.-+..-.+-|||++++ ++.+..+.++.+++...+|+.+..+.+-.
T Consensus 165 ------------rt~~~~~~~~~~~i~r~~a~~eaGa~~i~~-~~~~~~e~~~~i~~~v~iPv~~~~~~~~~-------- 223 (270)
T 3ih1_A 165 ------------RTDARGVEGLDEAIERANAYVKAGADAIFP-EALQSEEEFRLFNSKVNAPLLANXTEFGK-------- 223 (270)
T ss_dssp ------------EECCHHHHCHHHHHHHHHHHHHHTCSEEEE-TTCCSHHHHHHHHHHSCSCBEEECCTTSS--------
T ss_pred ------------ECHHHCCCCHHHHHHHHHHHHHHCCEEEEE-CCCCCHHHHHHHHHHCCCCEEEEECCCCC--------
T ss_conf ------------443420346899999999999839879996-37899999999997649987998468899--------
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCEEEECH
Q ss_conf 88978899999999999772699998201
Q gi|255764463|r 298 QGWINKNDAMMESLLAFKRAGCDGIFTYF 326 (337)
Q Consensus 298 ~g~~d~~~~~~E~l~~~kRAGAd~IitY~ 326 (337)
.+... +..+...|++.+..+-
T Consensus 224 ~~~~~--------~~~l~~~G~~~v~~~~ 244 (270)
T 3ih1_A 224 TPYYS--------AEEFANXGFQXVIYPV 244 (270)
T ss_dssp SCCCC--------HHHHHHTTCSEEEECS
T ss_pred CCCCC--------HHHHHHCCCCEEEECH
T ss_conf 98999--------9999986999999816
No 62
>>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A (A:1-278)
Probab=72.92 E-value=7.5 Score=19.77 Aligned_cols=149 Identities=7% Similarity=0.018 Sum_probs=80.6
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCC
Q ss_conf 6328899999999999988893676330256334554454215765379999999997301-447986133271001143
Q gi|255764463|r 62 VMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGH 140 (337)
Q Consensus 62 v~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGH 140 (337)
-.++..+.+.+.++.+.+.|++.+.+++...+-. .+ ...=-.+.++...+..+ .+.||+-+.-
T Consensus 46 d~~iD~~~~~~~i~~~~~~Gv~gl~i~GstGE~~-------~L-t~~Er~~l~~~~~~~~~~~~~vi~g~~~-------- 109 (278)
T 2v9d_A 46 DGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFS-------QL-GAEERKAIARFAIDHVDRRVPVLIGTGG-------- 109 (278)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGG-------GS-CHHHHHHHHHHHHHHHTTSSCEEEECCS--------
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECEEHHHHH-------HC-CHHHHHHHHHHHHHHCCCCCCEEECCCC--------
T ss_conf 8395999999999999986999999784466367-------68-4999999999999872665524422455--------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE--CCCCCC----CHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCC
Q ss_conf 1001365446289999999999999962897352--466767----7999999999877885773003366643543010
Q gi|255764463|r 141 DGILCDGEIVNDETIELISHAAVIQADAGADIIA--PSEMMD----GRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGP 214 (337)
Q Consensus 141 cGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA--PSdMMD----GrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgP 214 (337)
.+.+.-.+++....++|||.|. |--... |.+...++..| -.+.+|+=|
T Consensus 110 ------------~st~~ai~~a~~a~~~G~d~vli~pP~~~~~~~~~i~~~~~~i~~---a~~~pi~iy----------- 163 (278)
T 2v9d_A 110 ------------TNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVAD---SVTLPVXLY----------- 163 (278)
T ss_dssp ------------SCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHH---TCSSCEEEE-----------
T ss_pred ------------CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHH---HCCCCEEEE-----------
T ss_conf ------------662068999999986267704652022344220058899999998---459963321-----------
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HCCCCEEEECCCHHHHHHHH
Q ss_conf 167531024467777443157211478898888766-40898799553114589999
Q gi|255764463|r 215 YRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDI-QESADMLLVKPGLPYLDVCF 270 (337)
Q Consensus 215 FRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~-~EGAD~lMVKPa~~yLDii~ 270 (337)
+.++.....--.+...++ .+...++.+|-+-+-++-+.
T Consensus 164 ------------------n~p~~~g~~l~~~~l~~L~~~~pnivgiK~~~~d~~~~~ 202 (278)
T 2v9d_A 164 ------------------NFPALTGQDLTPALVKTLADSRSNIIGIKDTIDSVAHLR 202 (278)
T ss_dssp ------------------ECHHHHSSCCCHHHHHHHHHHCTTEEEEEECCSCHHHHH
T ss_pred ------------------CCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHH
T ss_conf ------------------242324777506678888863247644445432022455
No 63
>>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 3hb9_A* (A:495-825,A:946-1003)
Probab=72.51 E-value=7.7 Score=19.71 Aligned_cols=44 Identities=11% Similarity=0.050 Sum_probs=25.7
Q ss_pred CCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 1166675898811048887863288999999999999888936763
Q gi|255764463|r 42 LPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAI 87 (337)
Q Consensus 42 ~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~L 87 (337)
-++.|+|-. -+ .-..-++-.|++.+..+.-++.+.++|+..|-+
T Consensus 37 ~~i~I~DtT-lR-DG~Qs~~~~~~~t~d~~~ia~~l~~~Gv~~iEi 80 (389)
T 3hbl_A 37 DDVLLTDTT-FR-DAHQSLLATRVRTKDMINIASKTADVFKDGFSL 80 (389)
T ss_dssp SSBEEEECT-TT-HHHHHHSTTCCCHHHHHHHHHHHHHHTTTCSEE
T ss_pred CCEEEECCC-CC-CCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCC
T ss_conf 824774565-13-673232158743899899999999755685212
No 64
>>3e49_A Uncharacterized protein DUF849 with A TIM barrel fold; YP_556190.1; HET: MSE; 1.75A {Burkholderia xenovorans LB400} (A:)
Probab=72.23 E-value=7.8 Score=19.67 Aligned_cols=79 Identities=18% Similarity=0.190 Sum_probs=54.3
Q ss_pred CCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 11666758988110488878632889999999999998889367633025633455-44542157653799999999973
Q gi|255764463|r 42 LPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRN-NTGSHIIDPDNLINEGICAIKKN 120 (337)
Q Consensus 42 ~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd-~~GseA~n~dglv~rAIr~IK~~ 120 (337)
.|++|+--.|....-+++--.-=++.+++.+++.++++.|-..+-|. -+| ++|+.+++++ ..-.++..||+.
T Consensus 6 ~kviI~~A~nGa~~~k~~~P~lP~TpeEia~~a~~c~~AGAsivHlH------~Rd~~dG~~s~d~~-~y~eii~~IR~~ 78 (311)
T 3e49_A 6 RKVIITCAVTGAIHTPSXSPYLPVTPDEVAQASIGAAEAGAAVIHLH------ARDPRDGRPTQDPA-AFAEFLPRIKSN 78 (311)
T ss_dssp CCBCEEEECSCSSSCGGGCTTSCCSHHHHHHHHHHHHHHTCSEEEEC------EECTTTCCEECCHH-HHTTHHHHHHHH
T ss_pred CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE------ECCCCCCCCCCCHH-HHHHHHHHHHHH
T ss_conf 86899976789969723399998998999999999998187389977------35777799078999-999999999860
Q ss_pred HCCCEEE
Q ss_conf 0144798
Q gi|255764463|r 121 IPNIGII 127 (337)
Q Consensus 121 fpdl~vi 127 (337)
.|-|+-+
T Consensus 79 ~d~ii~~ 85 (311)
T 3e49_A 79 TDAVINL 85 (311)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
T ss_conf 8963540
No 65
>>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling, bifunctional enzyme; HET: NAD; 1.70A {Pseudomonas SP} (A:1-273)
Probab=71.94 E-value=7.9 Score=19.62 Aligned_cols=32 Identities=6% Similarity=0.052 Sum_probs=24.8
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEE-EECCCC
Q ss_conf 63288999999999999888936763-302563
Q gi|255764463|r 62 VMRMSIDVAVEKIKQVADLGIPAIAI-FPNIPM 93 (337)
Q Consensus 62 v~R~Sid~L~~eie~~~~lGI~av~L-Fp~I~~ 93 (337)
-.++|.+...+.++.+.++||..|=+ ||..++
T Consensus 24 ~~~~~~~~~~~i~~~L~~~Gv~~iE~g~~~~~~ 56 (273)
T 1nvm_A 24 RHQYTLDDVRAIARALDKAKVDSIEVAHGDGLQ 56 (273)
T ss_dssp TTCCCHHHHHHHHHHHHHHTCSEEECSCTTSTT
T ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCC
T ss_conf 999899999999999998294989968886765
No 66
>>3i6e_A Muconate cycloisomerase I; structural GENOMICS,NYSGXRC,TARGER 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A (A:130-362)
Probab=71.48 E-value=8.1 Score=19.55 Aligned_cols=67 Identities=12% Similarity=0.162 Sum_probs=49.4
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 88110488878632889999999999998889367633025633455445421576537999999999730144798613
Q gi|255764463|r 51 KTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDV 130 (337)
Q Consensus 51 ~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DV 130 (337)
..++.|+..-.+...+.+.+.+.++++.+.|.++|-+=.+-+.-.+| .+.++++++.+|+..++.|.
T Consensus 4 ~~r~~ip~y~~~~~~~~~~~~~~~~~~~~~G~~~~Kik~g~~~~~~d-------------~~~i~~~r~~~~d~~l~~D~ 70 (233)
T 3i6e_A 4 KCRDTIPLSCSIANPDFDADIALMERLRADGVGLIKLKTGFRDHAFD-------------IMRLELIARDFPEFRVRVDY 70 (233)
T ss_dssp CSCSEEEBEEEECCSSHHHHHHHHHHHHHHTCCEEEEECSSSCHHHH-------------HHHHHHHHHHCTTSEEEEEC
T ss_pred CCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH-------------HHHHHHHHHHCCCHHEEEEC
T ss_conf 76777631442135766778899888777267747530457741878-------------99998777518863114226
No 67
>>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis, hydrolase; 1.91A {Thermoanaerobacter tengcongensis MB4} (A:)
Probab=71.42 E-value=8.1 Score=19.54 Aligned_cols=130 Identities=15% Similarity=0.092 Sum_probs=86.6
Q ss_pred EEECCCCCCCHHHHHHHHHHHCCCCC-CCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 35246676779999999998778857-73003366643543010167531024467777443157211478898888766
Q gi|255764463|r 172 IIAPSEMMDGRVQEIRKKLDSHGHIN-VGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDI 250 (337)
Q Consensus 172 ivAPSdMMDGrV~aIR~~Ld~~g~~~-~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~ 250 (337)
.-.|.......+..+.+.+...++.+ +.+.|+.......+. . -.|.+ ...|-.+-.. ........
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~---~~~~~~~~~~----~~~~~~~~ 185 (252)
T 2pz0_A 120 IKSGIVLYPGIEEKLIKAIKEYNFEERVIISSFNHYSLRDVK----K---MAPHL---KIGLLYQCGL----VEPWHMAL 185 (252)
T ss_dssp ECCSSCCCTTHHHHHHHHHHHTTCTTTEEEEESBHHHHHHHH----H---HCTTS---EEEEEECSBC----SSTHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHH----H---HHHCC---EEEEEEECCC----CCHHHHHH
T ss_conf 357754461579999999996398785899968989998899----8---73055---1788840466----76144321
Q ss_pred HCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHH
Q ss_conf 40898799553114589999999624998999934618999999998889788999999999997726999982018999
Q gi|255764463|r 251 QESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEA 330 (337)
Q Consensus 251 ~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~ 330 (337)
..|+|.+.+.-.+..-..+..+++ .+++|.+|-| |.. +.+.-+.+.|+|.|+|-+-..+
T Consensus 186 ~~~~~~~~~~~~~~~~~~v~~~~~-~g~~v~~wtv----------------n~~----~~~~~l~~~GvdgI~TD~p~~~ 244 (252)
T 2pz0_A 186 RMEAYSLHPFYFNIIPELVEGCKK-NGVKLFPWTV----------------DRK----EDMERMIKAGVDGIITDDPETL 244 (252)
T ss_dssp HTTCSEEEEBGGGCCHHHHHHHHH-TTCEECCBCC----------------CSH----HHHHHHHHHTCSEEEESCHHHH
T ss_pred CCCCCEECCHHHHHHHHHHHHHHH-CCCEEEEEEC----------------CCH----HHHHHHHHCCCCEEEECCHHHH
T ss_conf 035411141142200999999998-7999999928----------------989----9999999859999998949999
Q ss_pred HHHHHC
Q ss_conf 999850
Q gi|255764463|r 331 ARILTH 336 (337)
Q Consensus 331 a~~L~~ 336 (337)
.++|++
T Consensus 245 ~~~l~~ 250 (252)
T 2pz0_A 245 INLVRK 250 (252)
T ss_dssp HHHHC-
T ss_pred HHHHHH
T ss_conf 999985
No 68
>>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} (A:)
Probab=71.36 E-value=1 Score=25.57 Aligned_cols=74 Identities=14% Similarity=0.119 Sum_probs=46.4
Q ss_pred HHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
Q ss_conf 88999863477888773311666758988110488878632889999999999998889367633025633455
Q gi|255764463|r 24 NWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRN 97 (337)
Q Consensus 24 ~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd 97 (337)
+.+|++..++.|...-+-.++|.+........-..=|.+++..++.+.+.++-+..+|++.+.++++.....++
T Consensus 72 ~~~~~~~~~~Gl~i~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~g~~~~~~~ 145 (386)
T 1muw_A 72 KRFRQALDATGMTVPMATTNLFTHPVFKDGGFTANDRDVRRYALRKTIRNIDLAVELGAKTYVAWGGREGAESG 145 (386)
T ss_dssp HHHHHHHHHHTCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEESST
T ss_pred HHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC
T ss_conf 99999999539842043154346855356878896999999999999999999999499969974898876676
No 69
>>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A (A:)
Probab=70.29 E-value=7.9 Score=19.62 Aligned_cols=130 Identities=12% Similarity=0.104 Sum_probs=66.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCC
Q ss_conf 28899999999999988893676330256334554454215765379999999997301447986133271001143100
Q gi|255764463|r 64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGI 143 (337)
Q Consensus 64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi 143 (337)
+...+.+.+.++.+.+.|++.+.+++.+.+-.. +. ..=-.+.++...+..+.+++ -++
T Consensus 15 ~iD~~~~~~~i~~l~~~Gv~gl~v~GstGE~~~-------Ls-~~Er~~l~~~~~~~~~~vi~--~~~------------ 72 (286)
T 2r91_A 15 RLDPELFANHVKNITSKGVDVVFVAGTTGLGPA-------LS-LQEKMELTDAATSAARRVIV--QVA------------ 72 (286)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEETSTTTTGGG-------SC-HHHHHHHHHHHHHHCSSEEE--ECC------------
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECEECCCCCC-------CC-HHHHHHHHHHHHHHCCCCCC--CCC------------
T ss_conf 489999999999999779999997926767230-------89-99999999998751122212--234------------
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCEE--ECCCC-----CCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHH
Q ss_conf 136544628999999999999996289735--24667-----67799999999987788577300336664354301016
Q gi|255764463|r 144 LCDGEIVNDETIELISHAAVIQADAGADII--APSEM-----MDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYR 216 (337)
Q Consensus 144 ~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv--APSdM-----MDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFR 216 (337)
..+.+.-.+.|.-.++.|+|-+ .|-.. -|+.+...+...+. .+.+|+=|-.-..+..--..+
T Consensus 73 --------~~s~~~~ie~a~~a~~~Ga~~v~v~~P~~~~~~~~~~i~~~~~~i~~~---~~lpi~lY~~p~~~~~~~~~~ 141 (286)
T 2r91_A 73 --------SLNADEAIALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSA---VSIPVFLYNYPAAVGRDVDAR 141 (286)
T ss_dssp --------CSSHHHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHH---CSSCEEEEECHHHHSSCCCHH
T ss_pred --------CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHH---CCCCEEEECCCCCCCCCCCCC
T ss_conf --------431035889988888623541455202333457747799999887651---154321113433322111220
Q ss_pred HHHHCCCCCCC
Q ss_conf 75310244677
Q gi|255764463|r 217 DAISTRDLLKG 227 (337)
Q Consensus 217 dA~~S~p~~~g 227 (337)
-.+.- |++.|
T Consensus 142 ~~~~~-pni~g 151 (286)
T 2r91_A 142 AAKEL-GCIRG 151 (286)
T ss_dssp HHHHH-SCEEE
T ss_pred HHHHH-HCCCC
T ss_conf 14554-02111
No 70
>>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} (A:)
Probab=69.72 E-value=8.8 Score=19.30 Aligned_cols=93 Identities=11% Similarity=0.034 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCC--CCC
Q ss_conf 999999999988893676330256334554454215765379999999997301447986133271001143100--136
Q gi|255764463|r 69 VAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGI--LCD 146 (337)
Q Consensus 69 ~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi--~~~ 146 (337)
.+.+.++.+.++|..+|=|++.-+...... ..+ ..-++.+|+.+-+. ++.+..++.|+.... ...
T Consensus 13 ~l~~~~~~~~~~G~~~iEl~~~~~~~~~~~------~~~---~~~~~~~~~~l~~~----gl~~~~~~~~~~~~~~~~~~ 79 (285)
T 1qtw_A 13 GLANAAIRAAEIDATAFALFTKNQRQWRAA------PLT---TQTIDEFKAACEKY----HYTSAQILPHDSYLINLGHP 79 (285)
T ss_dssp CHHHHHHHHHHTTCSEEECCSSCSSCSSCC------CCC---HHHHHHHHHHHHHT----TCCGGGBCCBCCTTCCTTCS
T ss_pred CHHHHHHHHHHCCCCEEEEECCCCCCCCCC------CCC---HHHHHHHHHHHHHC----CCCCEEEEEECCCCCCCCCC
T ss_conf 499999999975999999979997767889------999---99999999999985----99852899717730002685
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 5446289999999999999962897352
Q gi|255764463|r 147 GEIVNDETIELISHAAVIQADAGADIIA 174 (337)
Q Consensus 147 g~IdND~Tl~~L~k~Al~~A~AGaDivA 174 (337)
..-..+++++.+.+..-.-++-|+..|-
T Consensus 80 ~~~~~~~~~~~~~~~i~~a~~lG~~~i~ 107 (285)
T 1qtw_A 80 VTEALEKSRDAFIDEMQRCEQLGLSLLN 107 (285)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 5899999999999999999981997217
No 71
>>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus} (A:)
Probab=69.00 E-value=9.1 Score=19.20 Aligned_cols=167 Identities=13% Similarity=0.116 Sum_probs=82.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEECCCCCHHHCCCCCC
Q ss_conf 2889999999999998889367633025633455445421576537999999999730-144798613327100114310
Q gi|255764463|r 64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI-PNIGIITDVALDPFTIHGHDG 142 (337)
Q Consensus 64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f-pdl~vi~DVcLc~YT~hGHcG 142 (337)
....+.+.+.++.+.+.|+..+.+++...+-. +-+..+ -.+-++...+.. +...||.-|. +
T Consensus 17 ~iD~~~~~~~i~~l~~~Gv~gl~~~G~~GE~~-----~Ls~~E---r~~v~~~~~~~~~~~~~vi~gv~--------~-- 78 (294)
T 2ehh_A 17 EVDYEALGNLIEFHVDNGTDAILVCGTTGESP-----TLTFEE---HEKVIEFAVKRAAGRIKVIAGTG--------G-- 78 (294)
T ss_dssp EECHHHHHHHHHHHHTTTCCEEEESSTTTTGG-----GSCHHH---HHHHHHHHHHHHTTSSEEEEECC--------C--
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECEECCCCC-----CCCHHH---HHHHHHHHHHHCCCCCEEEECCC--------C--
T ss_conf 66999999999999976999899783454610-----388999---99999999997478733896377--------7--
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC------CCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHH
Q ss_conf 0136544628999999999999996289735246676------7799999999987788577300336664354301016
Q gi|255764463|r 143 ILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMM------DGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYR 216 (337)
Q Consensus 143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMM------DGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFR 216 (337)
.+.+...++|-...++|+|.|.-.-.. ++-+...++..+. .+.+|+=|-....|.
T Consensus 79 ----------~s~~~~i~~a~~A~~~Gad~vl~~pP~~~~~~~~~i~~~~~~i~~a---~~~pi~iyn~p~~~g------ 139 (294)
T 2ehh_A 79 ----------NATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQE---VDIPIIIYNIPSRTC------ 139 (294)
T ss_dssp ----------SCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH---CCSCEEEEECHHHHS------
T ss_pred ----------CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC---CCCCEEEEECCCCCC------
T ss_conf ----------5799999999999976999999888878998999999999999865---599589997774321------
Q ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHH
Q ss_conf 7531024467777443157211478898888766408987995531145899999996249989999346189
Q gi|255764463|r 217 DAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEY 289 (337)
Q Consensus 217 dA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEY 289 (337)
+-+. -+.+.+ =..|.--++.+|-+-+-++-+.++.+.+.--+..+.-++++
T Consensus 140 ---------------~~~~----~~~l~~---l~~~~p~v~g~K~~~~~~~~~~~~~~~~~~~~~v~~G~d~~ 190 (294)
T 2ehh_A 140 ---------------VEIS----VDTMFK---LASECENIVASKESTPNMDRISEIVKRLGESFSVLSGDDSL 190 (294)
T ss_dssp ---------------CCCC----HHHHHH---HHHHCTTEEEEEECCSCHHHHHHHHHHHCTTSEEEESSGGG
T ss_pred ---------------CCCH----HHHHHH---HHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf ---------------3422----789999---98751544235667898689999999769986999677211
No 72
>>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} (A:)
Probab=68.89 E-value=1.5 Score=24.56 Aligned_cols=179 Identities=12% Similarity=0.046 Sum_probs=93.0
Q ss_pred HHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 88999863477888773311666758988110488878632889999999999998889367633025633455445421
Q gi|255764463|r 24 NWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHI 103 (337)
Q Consensus 24 ~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA 103 (337)
+.+|++..++.|....+-.++|.+.....-..-..-|++.+..++.+.+.++-+..+|.+.+.++++.+...++......
T Consensus 72 ~~~~~~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~~~~~~g~~~~~~~~~~~~~ 151 (387)
T 1bxb_A 72 RRFKKALDETGLKVPMVTANLFSDPAFKDGAFTSPDPWVRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKAR 151 (387)
T ss_dssp HHHHHHHHHHTCBCCEEECCCSSSGGGGGCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGG
T ss_pred HHHHHHHHCCCCCEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHH
T ss_conf 99999864068730011554345766534653589889999999999999999998399969976787766776305799
Q ss_pred CCCCCHHHHHHHHHHH---HHC-CCEEEEC-------------------CCCCHHHCCCCCCCCCC-C-----CCCHHHH
Q ss_conf 5765379999999997---301-4479861-------------------33271001143100136-5-----4462899
Q gi|255764463|r 104 IDPDNLINEGICAIKK---NIP-NIGIITD-------------------VALDPFTIHGHDGILCD-G-----EIVNDET 154 (337)
Q Consensus 104 ~n~dglv~rAIr~IK~---~fp-dl~vi~D-------------------VcLc~YT~hGHcGi~~~-g-----~IdND~T 154 (337)
-.- ..+.+.++.+-+ ..+ .+.+-.. .-+..++.+-+.|+.-| + ..+-...
T Consensus 152 ~~~-~~~~~~l~~i~~~a~~~g~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~lD~gH~~~~g~d~~~~ 230 (387)
T 1bxb_A 152 KVW-DWVREALNFMAAYAEDQGYGYRFALEPKPNEPRGDIYFATVGSMLAFIHTLDRPERFGLNPEFAHETMAGLNFVHA 230 (387)
T ss_dssp THH-HHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHHHHHHHTTSSSGGGEEECCBHHHHHHTTCCHHHH
T ss_pred HHH-HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCHHHEEECCCCCHHHHCCCCHHHH
T ss_conf 999-9999999999997775188837999407898753521588999999999837702175312313453048775889
Q ss_pred HHHHHHH---HHHHHHCC-----CCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECH
Q ss_conf 9999999---99999628-----9735246676779999999998778857730033
Q gi|255764463|r 155 IELISHA---AVIQADAG-----ADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPY 203 (337)
Q Consensus 155 l~~L~k~---Al~~A~AG-----aDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsY 203 (337)
++.+... .-.|..-+ -+.+.|-+--=..+.++.+.|...||.....+-+
T Consensus 231 ~~~~~~~~~i~hvh~~~~~~~~~~~~~~~G~G~~~~~~~~~~~l~~~g~~g~~~~e~ 287 (387)
T 1bxb_A 231 VAQALDAGKLFHIDLNDQRMSRFDQDLRFGSENLKAAFFLVDLLESSGYQGPRHFDA 287 (387)
T ss_dssp HHHHHHTTCBCCEECCBCCSSSSCCCBCTTSSCHHHHHHHHHHHHHTTCCSCEECCC
T ss_pred HHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 999998396406274787778887667788745788889999998548876434223
No 73
>>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transferase; HET: KCX; 1.90A {Propionibacterium freudenreichiisubsp} (A:1-308,A:422-472)
Probab=68.72 E-value=9.2 Score=19.17 Aligned_cols=215 Identities=15% Similarity=0.067 Sum_probs=102.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCC
Q ss_conf 87863288999999999999888936763302563345544542157653799999999973014479861332710011
Q gi|255764463|r 59 MPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIH 138 (337)
Q Consensus 59 MPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~h 138 (337)
+-|...++.+.....++...+.|+..|-+|.. .|.-..+..+++.+|+.-..+ -+++|..++.
T Consensus 108 ~~~~~~~~~~vv~~f~~~s~~~~~~~~ri~~~-------------~n~~~~~~~~i~~ak~~G~~v----~~~i~~~~~~ 170 (359)
T 1rqb_A 108 LLGYRHYNDEVVDRFVDKSAENGXDVFRVFDA-------------XNDPRNXAHAXAAVKKAGKHA----QGTICYTISP 170 (359)
T ss_dssp TTSSSCCCHHHHHHHHHHHHHTTCCEEEECCT-------------TCCTHHHHHHHHHHHHTTCEE----EEEEECCCST
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH-------------HHHHHHHHHHHHHHHHCCCEE----EEEEECCCCC
T ss_conf 01002587789999999999851388734767-------------889999888899999569879----9999616787
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC--------HHHHHHHHH--HH-CC--CCCCCEECHHH
Q ss_conf 4310013654462899999999999999628973524667677--------999999999--87-78--85773003366
Q gi|255764463|r 139 GHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDG--------RVQEIRKKL--DS-HG--HINVGIMPYVA 205 (337)
Q Consensus 139 GHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDG--------rV~aIR~~L--d~-~g--~~~~~ImsYsa 205 (337)
.|+ ++.+.+++....++|+|+|+=.||.-. .|..+|+.+ +- =+ +.|+.=|+.+.
T Consensus 171 ~~~-------------~e~~~~~a~~l~~~G~d~I~i~Dt~G~~~P~~~~~lv~~lk~~~~~~i~i~~H~Hnt~Gla~an 237 (359)
T 1rqb_A 171 VHT-------------VEGYVKLAGQLLDXGADSIALXDXAALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVS 237 (359)
T ss_dssp TCC-------------HHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHH
T ss_pred CCC-------------HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH
T ss_conf 879-------------9999999767773697679871576531277999999999986575433123124606479999
Q ss_pred HHHHHHHCCHHHHHHCCC-CCCCCCCCCCCCCCHHHHHHHHHHH--HHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEE-
Q ss_conf 643543010167531024-4677774431572114788988887--664089879955311458999999962499899-
Q gi|255764463|r 206 KFNSSFYGPYRDAISTRD-LLKGDKKTYYLDPANVQEAIREASI--DIQESADMLLVKPGLPYLDVCFRIKEKFGLPTF- 281 (337)
Q Consensus 206 KfaS~fYgPFRdA~~S~p-~~~gdr~sYQmd~~n~~eA~~e~~~--D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~- 281 (337)
=.+..-.|= |.++++= .+ | +++=|.+. |.+..... ..+-|-|+-.+.+.--|+.=++.....+.-|+.
T Consensus 238 ~laAi~AGa--d~IDtai~G~-G-~~tGn~~t----E~lv~~L~~~g~~t~idl~~L~~i~~~~~~~~~~y~~~~~~~v~ 309 (359)
T 1rqb_A 238 LXKAIEAGV--DVVDTAISSX-S-LGPGHNPT----ESVAEXLEGTGYTTNLDYDRLHKIRDHFKAIRPKYKKFESKTLP 309 (359)
T ss_dssp HHHHHHTTC--SEEEEBCGGG-C-STTSBCBH----HHHHHHTTTSSEECCCCHHHHHHHHHHHHHHGGGGGGGCCSCSG
T ss_pred HHHHHHCCC--CEEECCCCCC-C-CCCCCCCH----HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 999998598--8983445666-7-88789858----99999985468665655999999999999999871345555665
Q ss_pred EEECCHHHHHHHHHHHC--CC-CCHHHHHHHHH
Q ss_conf 99346189999999988--89-78899999999
Q gi|255764463|r 282 AYQVSGEYAMIKAASLQ--GW-INKNDAMMESL 311 (337)
Q Consensus 282 aYqVSGEYami~~a~~~--g~-~d~~~~~~E~l 311 (337)
|=...-|+--++..... ++ -.+++++.-.|
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (359)
T 1rqb_A 310 ADLLPPEWEKQSKEAATLKGFNGTDEDVLTYAL 342 (359)
T ss_dssp GGGCCCCHHHHHHHHTTSTTCCSSHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHC
T ss_conf 243884679999999975699999999999873
No 74
>>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} (A:)
Probab=68.21 E-value=5.6 Score=20.63 Aligned_cols=74 Identities=9% Similarity=0.024 Sum_probs=58.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 7443157211478898888766408987995---53114589999999624-99899993461899999999888978
Q gi|255764463|r 229 KKTYYLDPANVQEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 229 r~sYQmd~~n~~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
+..|+.-.....++..+....-..+.|++.+ =|++.=+|+++.+++.. .+|+...--.|+......|.+.|..|
T Consensus 28 ~~g~~v~~~~~~~~~~~~~~~~~~~~~iv~~dl~mp~~~Glell~~l~~~~~~~pvIilTg~~d~~~~~~a~~~Ga~d 105 (136)
T 3kto_A 28 PLDVTIQCFASAESFXRQQISDDAIGXIIEAHLEDKKDSGIELLETLVKRGFHLPTIVXASSSDIPTAVRAXRASAAD 105 (136)
T ss_dssp TSSSEEEEESSHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEESSCCHHHHHHHHHTTCSE
T ss_pred HCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCE
T ss_conf 879999998999999999984799889998268758997166777777414668789996489999999999769958
No 75
>>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae} (A:225-545)
Probab=68.12 E-value=9.5 Score=19.08 Aligned_cols=203 Identities=16% Similarity=0.069 Sum_probs=113.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCC----EEEEEECCCCCCCCCCCCCCCC---CCCHHHHHHHHHHHHHC----CCEEEE
Q ss_conf 786328899999999999988893----6763302563345544542157---65379999999997301----447986
Q gi|255764463|r 60 PDVMRMSIDVAVEKIKQVADLGIP----AIAIFPNIPMDLRNNTGSHIID---PDNLINEGICAIKKNIP----NIGIIT 128 (337)
Q Consensus 60 PGv~R~Sid~L~~eie~~~~lGI~----av~LFp~I~~~~Kd~~GseA~n---~dglv~rAIr~IK~~fp----dl~vi~ 128 (337)
.|++.-..+.+++++.+..+.|-. .++=-|+ . + +.-|++.-+ +-.-+..+|+.|++.+. ++.
T Consensus 17 ~~~~~~d~e~a~~~A~~~~~~GA~~ldvdiiDiG~-~-s--trp~a~~v~~eeE~~rl~~~i~~i~~~~~~~~~~vp--- 89 (321)
T 2bmb_A 17 GGEHFADIESQLNDIIKLCKDALYLHESVIIDVGG-C-S--TRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVI--- 89 (321)
T ss_dssp TTTTTTCHHHHHHHHHHHHHHHHTTCSCEEEEEEC-S-C--CSTTCCCCCHHHHHHHHHHHHHHHHHCSSSCGGGEE---
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECC-C-C--CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCE---
T ss_conf 86555889999999999997253426993899697-6-3--899698489999999899999999974214557866---
Q ss_pred CCCCCHHHCCCCCCCCCCC-CCCHHHHHHH--HHHHHHHHHHCCCCEEECCC------CCC-------------------
Q ss_conf 1332710011431001365-4462899999--99999999962897352466------767-------------------
Q gi|255764463|r 129 DVALDPFTIHGHDGILCDG-EIVNDETIEL--ISHAAVIQADAGADIIAPSE------MMD------------------- 180 (337)
Q Consensus 129 DVcLc~YT~hGHcGi~~~g-~IdND~Tl~~--L~k~Al~~A~AGaDivAPSd------MMD------------------- 180 (337)
+|+|.|...=.---++.| .|.||-|... .......-++.||.+|+-.. |-+
T Consensus 90 -iSIDT~~~~v~eaaL~~G~~iINdvsg~~~d~~~~~~la~~~~~~vV~m~~~g~P~t~~~r~~~~~~~~~~~~~~g~~~ 168 (321)
T 2bmb_A 90 -LSIDTYRSNVAKEAIKVGVDIINDISGGLFDSNMFAVIAENPEICYILSHTRGDISTMNRLAHYENFALGDSIQQEFVH 168 (321)
T ss_dssp -EEEECCCHHHHHHHHHTTCCEEEETTTTSSCTTHHHHHHTCTTSEEEEECCCSCTTTGGGCCCCSSCTTTTTEEEEEET
T ss_pred -EEEECCCHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
T ss_conf -9898986999999997798699613312357402335441454203421457886655557776652112210000023
Q ss_pred --------------CHHH-------HHHHHHHHCCCCCCCEEC-HHHHH------HHHHH-----------------CCH
Q ss_conf --------------7999-------999999877885773003-36664------35430-----------------101
Q gi|255764463|r 181 --------------GRVQ-------EIRKKLDSHGHINVGIMP-YVAKF------NSSFY-----------------GPY 215 (337)
Q Consensus 181 --------------GrV~-------aIR~~Ld~~g~~~~~Ims-YsaKf------aS~fY-----------------gPF 215 (337)
.-+. ...+.+.+.|.....|++ =+--| ...|- -.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~Gi~~~~ii~DpgiGf~k~~~~n~~~l~~~~~~~~~~~i~~~~~~~~ 248 (321)
T 2bmb_A 169 NTDIQQLDDLKDKTVLIRNVGQEIGERYIKAIDNGVKRWQILIDPGLGFAKTWKQNLQIIRHIPILKNYSFTMNSNNSQV 248 (321)
T ss_dssp TEEGGGSTTHHHHCHHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHTTEEEEEEETTEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCCCCC
T ss_conf 32012200122223689999999999999999869985579996898868987999999977599874475311221000
Q ss_pred HHHHHCCCCCCC-CCCCC------CCCCCHHHHHHHH-HHHHHHCCCCEEEECCCHHHHHHHH
Q ss_conf 675310244677-77443------1572114788988-8876640898799553114589999
Q gi|255764463|r 216 RDAISTRDLLKG-DKKTY------YLDPANVQEAIRE-ASIDIQESADMLLVKPGLPYLDVCF 270 (337)
Q Consensus 216 RdA~~S~p~~~g-dr~sY------Qmd~~n~~eA~~e-~~~D~~EGAD~lMVKPa~~yLDii~ 270 (337)
+...-..|.+.| +||++ ..++..+..+-.. ...=+..|||++-|-|--.-.+++.
T Consensus 249 ~~~~~~~pvl~G~Srk~f~~~~~~~~~~~~R~~~t~a~~~~a~~~G~~~~RvHdv~~~~~~l~ 311 (321)
T 2bmb_A 249 YVNLRNMPVLLGPSRKKFIGHITKDVDAKQRDFATGAVVASCIGFGSDMVRVHDVKNCSKSIK 311 (321)
T ss_dssp EEECTTCCBEECCTTCHHHHHHHTCCSGGGGHHHHHHHHHHHHHTTCSEEEESCHHHHHHHHH
T ss_pred CCCCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
T ss_conf 124679628999533289998728998688719999999999987997999479899999999
No 76
>>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661} (A:)
Probab=67.76 E-value=9.6 Score=19.04 Aligned_cols=112 Identities=18% Similarity=0.211 Sum_probs=57.0
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCCCC
Q ss_conf 8899999999999988893676330256334554454215765379999999997301-447986133271001143100
Q gi|255764463|r 65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHDGI 143 (337)
Q Consensus 65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHcGi 143 (337)
...+.+.+.++.+.+.|++.+.+++...+-. .+. ..=-.+.++...+..+ .+-|++-+.
T Consensus 18 iD~~~~~~~i~~l~~~Gv~gl~~~G~~gE~~-------~lt-~~Er~~~~~~~~~~~~~~~~ii~g~~------------ 77 (289)
T 2yxg_A 18 VDFDGLEENINFLIENGVSGIVAVGTTGESP-------TLS-HEEHKKVIEKVVDVVNGRVQVIAGAG------------ 77 (289)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEESSTTTTGG-------GSC-HHHHHHHHHHHHHHHTTSSEEEEECC------------
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECEECCCHH-------HCC-HHHHHHHHHHHHHHCCCCEEEEECCC------------
T ss_conf 6999999999999977999899785442366-------589-99999999999986079706997157------------
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE--CCCCC----CCHHHHHHHHHHHCCCCCCCEECHHHHH
Q ss_conf 1365446289999999999999962897352--46676----7799999999987788577300336664
Q gi|255764463|r 144 LCDGEIVNDETIELISHAAVIQADAGADIIA--PSEMM----DGRVQEIRKKLDSHGHINVGIMPYVAKF 207 (337)
Q Consensus 144 ~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA--PSdMM----DGrV~aIR~~Ld~~g~~~~~ImsYsaKf 207 (337)
+.+.+.-.++|-...++|+|.|- |-.+- ++-+...+...+. .+.+|+=|-...
T Consensus 78 --------~~s~~~ai~~a~~a~~~G~d~v~i~pP~~~~~s~~~i~~~~~~ia~a---~~~pi~iyn~P~ 136 (289)
T 2yxg_A 78 --------SNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAES---INLPIVLYNVPS 136 (289)
T ss_dssp --------CSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH---CSSCEEEEECHH
T ss_pred --------CCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH---CCCCEEEEECCC
T ss_conf --------40199999999999977999999889878898999999999999982---799889997863
No 77
>>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} (A:1-196)
Probab=67.72 E-value=6.1 Score=20.39 Aligned_cols=46 Identities=22% Similarity=0.313 Sum_probs=32.9
Q ss_pred HHHHHHHHHHCCCCEEECC------CCCCC--HHHHHHHHHHHCCCCCCCEECHH
Q ss_conf 9999999996289735246------67677--99999999987788577300336
Q gi|255764463|r 158 ISHAAVIQADAGADIIAPS------EMMDG--RVQEIRKKLDSHGHINVGIMPYV 204 (337)
Q Consensus 158 L~k~Al~~A~AGaDivAPS------dMMDG--rV~aIR~~Ld~~g~~~~~ImsYs 204 (337)
-..|+..-|+|||++|+|= ...|| .+..|++.+..+|+. +.||.=|
T Consensus 113 s~~Qa~~aa~Aga~~ispyvgRi~~~~~~g~~~~~~~~~~~~~~~~~-tkil~AS 166 (196)
T 1l6w_A 113 GAAQGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAPQ-AKVLAAS 166 (196)
T ss_dssp SHHHHHHHHHHTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHHCTT-CEEEEBC
T ss_pred CHHHHHHHHHCCCCEEEEEEEEHHHCCCCCHHHHHHHHHHHHHCCCC-EEEEEEE
T ss_conf 79999999972557075554224524688689999999999835898-0999887
No 78
>>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefaciens STR. C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str} (A:1-280)
Probab=66.83 E-value=10 Score=18.91 Aligned_cols=121 Identities=14% Similarity=0.131 Sum_probs=60.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCCC
Q ss_conf 28899999999999988893676330256334554454215765379999999997301-44798613327100114310
Q gi|255764463|r 64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHDG 142 (337)
Q Consensus 64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHcG 142 (337)
....+.+.+.++.+.+.|++.+.+++...+-. +-... =-.+.++...+..+ .+.|++-+.-
T Consensus 51 ~ID~~~~~~~i~~li~~Gv~Gi~i~Gs~GE~~-----~Ls~e---Er~~l~~~~~~~~~~r~~vi~g~~~---------- 112 (280)
T 2r8w_A 51 RVDIEAFSALIARLDAAEVDSVGILGSTGIYX-----YLTRE---ERRRAIEAAATILRGRRTLXAGIGA---------- 112 (280)
T ss_dssp CBCHHHHHHHHHHHHHHTCSEEEESSTTTTGG-----GSCHH---HHHHHHHHHHHHHTTSSEEEEEECC----------
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECEECCCHH-----HCCHH---HHHHHHHHHHHHHCCCCCCCCCCCH----------
T ss_conf 87999999999999977999999782065542-----48999---9999999999973145420123310----------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCE--EECCCCCCCHHHHHHHHHHH-CCCCCCCEECHHHHHHHHHH
Q ss_conf 013654462899999999999999628973--52466767799999999987-78857730033666435430
Q gi|255764463|r 143 ILCDGEIVNDETIELISHAAVIQADAGADI--IAPSEMMDGRVQEIRKKLDS-HGHINVGIMPYVAKFNSSFY 212 (337)
Q Consensus 143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaDi--vAPSdMMDGrV~aIR~~Ld~-~g~~~~~ImsYsaKfaS~fY 212 (337)
.+.+.-.+++....++|+|. |.|-......-..|.+-... ....+++|+=|.....+.+.
T Consensus 113 ----------~st~~~i~~a~~A~~~G~d~vlv~pP~~~~~~~~~i~~~~~~ia~a~~~pi~iYn~P~~~g~~ 175 (280)
T 2r8w_A 113 ----------LRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFT 175 (280)
T ss_dssp ----------SSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCC
T ss_pred ----------HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf ----------257788899876203454322212233456552366766545554125311342122233456
No 79
>>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A (A:)
Probab=66.70 E-value=10 Score=18.90 Aligned_cols=122 Identities=10% Similarity=0.037 Sum_probs=65.8
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-CEEEECCCCCHHHCCC
Q ss_conf 863288999999999999888936763302563345544542157653799999999973014-4798613327100114
Q gi|255764463|r 61 DVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPN-IGIITDVALDPFTIHG 139 (337)
Q Consensus 61 Gv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpd-l~vi~DVcLc~YT~hG 139 (337)
.......+.+.+.++.+.+.|+..+.+++...+-. +++++ =-.+.++.+.+.... +.+++.+
T Consensus 13 ~d~~iD~~~~~~~i~~l~~~Gv~gi~v~GstGE~~-------~Ls~~-Er~~l~~~~~~~~~~~i~~~~~~--------- 75 (288)
T 2nuw_A 13 KQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGP-------ALSKD-EKRQNLNALYDVTHKLIFQVGSL--------- 75 (288)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGG-------GSCHH-HHHHHHHHHTTTCSCEEEECCCS---------
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEECEEHHHHH-------HCCHH-HHHHHHHHHHHHCCCCCCCCCCC---------
T ss_conf 88498899999999999985999999784224277-------58899-99999996555402322222222---------
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE---EC-CCC---CCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHH
Q ss_conf 3100136544628999999999999996289735---24-667---6779999999998778857730033666435430
Q gi|255764463|r 140 HDGILCDGEIVNDETIELISHAAVIQADAGADII---AP-SEM---MDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFY 212 (337)
Q Consensus 140 HcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv---AP-SdM---MDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fY 212 (337)
+.+.-.+.+-..++.|+|-+ .| +-- -++-+...+...+. .+.+|+=|-....+.+-
T Consensus 76 --------------s~~~~i~~~~~a~~~Ga~~~~~~~P~~~~~~~~~~i~~~~~~ia~a---~~~pi~iYn~P~~~g~~ 138 (288)
T 2nuw_A 76 --------------NLNDVMELVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARI---SSHSLYIYNYPAATGYD 138 (288)
T ss_dssp --------------CHHHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHH---CCSCEEEEECHHHHSCC
T ss_pred --------------CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC---CCCEEEEEECCCCCCCC
T ss_conf --------------2200044544200133334220223345503554466556554035---55304554033223432
Q ss_pred CCHH
Q ss_conf 1016
Q gi|255764463|r 213 GPYR 216 (337)
Q Consensus 213 gPFR 216 (337)
-+..
T Consensus 139 ~~~~ 142 (288)
T 2nuw_A 139 IPPS 142 (288)
T ss_dssp CCHH
T ss_pred HHHH
T ss_conf 1467
No 80
>>2hjp_A Phosphonopyruvate hydrolase; phosporus- carbon bond cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A (A:1-262)
Probab=66.56 E-value=10 Score=18.88 Aligned_cols=163 Identities=15% Similarity=0.059 Sum_probs=96.1
Q ss_pred HHHHCCCCEEEEEECCCCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHH
Q ss_conf 999888936763302563345544542157--653799999999973014479861332710011431001365446289
Q gi|255764463|r 76 QVADLGIPAIAIFPNIPMDLRNNTGSHIID--PDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDE 153 (337)
Q Consensus 76 ~~~~lGI~av~LFp~I~~~~Kd~~GseA~n--~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~ 153 (337)
-+.+.|.+++.+=+.. .-...|..... +-+=+...++.|....+ +-|++|. ++|+.+
T Consensus 30 ~~e~~g~~ai~~s~~~---~a~~~G~pD~~~~~~~e~~~~v~~I~~~~~-~PliaD~------d~G~g~----------- 88 (262)
T 2hjp_A 30 LAEQAGFGGIWGSGFE---LSASYAVPDANILSMSTHLEMMRAIASTVS-IPLIADI------DTGFGN----------- 88 (262)
T ss_dssp HHHHHTCSEEEECHHH---HHHHTTSCTTTCSCHHHHHHHHHHHHTTCS-SCEEEEC------TTTTSS-----------
T ss_pred HHHHCCCCEEEECHHH---HHHHCCCCCCCCCCHHHHHHHHHHHHCCCC-CCEEEEC------CCCCCC-----------
T ss_conf 9998499999945799---999769998564414567999998851367-7648775------788785-----------
Q ss_pred HHHHHHHHHHHHHHCCCCEEECCCC--------CC----------CHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCH
Q ss_conf 9999999999999628973524667--------67----------79999999998778857730033666435430101
Q gi|255764463|r 154 TIELISHAAVIQADAGADIIAPSEM--------MD----------GRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPY 215 (337)
Q Consensus 154 Tl~~L~k~Al~~A~AGaDivAPSdM--------MD----------GrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPF 215 (337)
.+.+.+.+-.+.+|||+.|---|= ++ +.++.++.+.+..+..+..|..-
T Consensus 89 -~~~v~~~~~~~~~aGa~gi~IED~~~~k~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~i~aR------------ 155 (262)
T 2hjp_A 89 -AVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIAR------------ 155 (262)
T ss_dssp -HHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEE------------
T ss_pred -CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCHHHHHH------------
T ss_conf -4379999899997058378870401256676556666220659999999876555205840667766------------
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 67531024467777443157211478898888766408987995531145899999996249989999346
Q gi|255764463|r 216 RDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVS 286 (337)
Q Consensus 216 RdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVS 286 (337)
..+..--....||++.+...++-|||++++.--.+-.+.++.+.+....|+..=.+.
T Consensus 156 --------------tda~~~~~~~~~ai~Ra~ay~~aGAd~i~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 212 (262)
T 2hjp_A 156 --------------VEALIAGLGQQEAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWPGKVPLVLVP 212 (262)
T ss_dssp --------------ECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCCSSCEEECG
T ss_pred --------------HHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCEEEEEEC
T ss_conf --------------420235898799999999788769978972044466999999875326771688734
No 81
>>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structure initiative, nysgrc; 2.30A {Roseovarius nubinhibens ism} PDB: 3fvd_B (A:127-356)
Probab=66.55 E-value=10 Score=18.88 Aligned_cols=138 Identities=13% Similarity=0.048 Sum_probs=80.3
Q ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECC
Q ss_conf 81104888786328899999999999988893676330256334554454215765379999999997301-44798613
Q gi|255764463|r 52 TVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDV 130 (337)
Q Consensus 52 ~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DV 130 (337)
.++.|+.-=-+...+.+.+.+++++..+.|.+.|-+=.+...-..| -..|+++++.++ ++.++.|.
T Consensus 5 ~r~~ip~y~~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d-------------i~~v~air~~~g~~~~l~vDa 71 (230)
T 2qdd_A 5 AATPVPINSSISTGTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQD-------------IARIEAISAGLPDGHRVTFDV 71 (230)
T ss_dssp SCCCEEBEEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHH-------------HHHHHHHHHSCCTTCEEEEEC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHH-------------HHHHHHHHHHHCCCCCCCCCC
T ss_conf 2102320111222026899998765664176046422586237788-------------887641233204553001023
Q ss_pred CCCHHHCC----------------------CCCCCCC---CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHH
Q ss_conf 32710011----------------------4310013---6544628999999999999996289735246676779999
Q gi|255764463|r 131 ALDPFTIH----------------------GHDGILC---DGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQE 185 (337)
Q Consensus 131 cLc~YT~h----------------------GHcGi~~---~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~a 185 (337)
-..||.. -.++.+. .-.|--|+++.......-...+..+|++-|--+--|-+..
T Consensus 72 -n~~~~~~~A~~~~~~l~~~~~~EeP~~~~~~~~~~~~~~~~pia~~E~~~~~~~~~~~~~~~a~d~~~~d~~~~GGit~ 150 (230)
T 2qdd_A 72 -NRAWTPAIAVEVLNSVRARDWIEQPCQTLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTR 150 (230)
T ss_dssp -TTCCCHHHHHHHHTSCCCCCEEECCSSSHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHH
T ss_pred -CCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCHHH
T ss_conf -3358878889999987504621122101222002332044321346543321001234324755566520110341457
Q ss_pred HHHHHHHCCCCCCCEECH
Q ss_conf 999998778857730033
Q gi|255764463|r 186 IRKKLDSHGHINVGIMPY 203 (337)
Q Consensus 186 IR~~Ld~~g~~~~~ImsY 203 (337)
.++..+...-.++.++.+
T Consensus 151 ~~~i~~~A~~~gi~~~~h 168 (230)
T 2qdd_A 151 ARQIRDFGVSVGWQMHIE 168 (230)
T ss_dssp HHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHCCCEECC
T ss_conf 899999999841554148
No 82
>>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: GOL; 2.40A {Thermotoga maritima} (A:1-206)
Probab=66.31 E-value=7.1 Score=19.94 Aligned_cols=44 Identities=23% Similarity=0.396 Sum_probs=30.4
Q ss_pred HHHHHHHHHCCCCEEEC-----CCCCCC---HHHHHHHHHHHCCCCCCCEECH
Q ss_conf 99999999628973524-----667677---9999999998778857730033
Q gi|255764463|r 159 SHAAVIQADAGADIIAP-----SEMMDG---RVQEIRKKLDSHGHINVGIMPY 203 (337)
Q Consensus 159 ~k~Al~~A~AGaDivAP-----SdMMDG---rV~aIR~~Ld~~g~~~~~ImsY 203 (337)
..||+.-++|||++|+| .+..|- .+..+++.+..+|+. +.||.=
T Consensus 124 ~~Qa~~aa~Aga~~ispyvgRi~~~~~dg~~~v~~~~~~~~~~~~~-tkvlaA 175 (206)
T 1vpx_A 124 PAQAILAAKAGATYVSPFVGRMDDLSNDGMRMLGEIVEIYNNYGFE-TEIIAA 175 (206)
T ss_dssp HHHHHHHHHHTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHHTCS-CEEEEB
T ss_pred HHHHHHHHHCCCCEEEEEEEEHHCCCCCCCHHHHHHHHHHHHHCCC-CEEEEC
T ss_conf 9999998644785588764120101346604589999999743567-347651
No 83
>>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} (A:1-344)
Probab=65.58 E-value=11 Score=18.76 Aligned_cols=116 Identities=17% Similarity=0.136 Sum_probs=71.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC---CC---CCCCCCCC------------HHHHHHHHHHH
Q ss_conf 88786328899999999999988893676330256334554---45---42157653------------79999999997
Q gi|255764463|r 58 SMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNN---TG---SHIIDPDN------------LINEGICAIKK 119 (337)
Q Consensus 58 SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~---~G---seA~n~dg------------lv~rAIr~IK~ 119 (337)
.++..+......+.+.+..+.++|+++|-|-|+.+...... .+ ...|++.+ -..+.|+++.+
T Consensus 7 ~i~~~~~G~~~gi~~~ldyl~~lGv~~I~L~Pi~~~~~~~~~~~~~~~~~~gY~~~~~~~i~~~~Gt~~~fk~Lv~~~H~ 86 (344)
T 1ua7_A 7 TILHAWNWSFNTLKHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEE 86 (344)
T ss_dssp CEEECTTBCHHHHHHTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 58990578799999958999975999899698712777667777678875322543467768568999999999999865
Q ss_pred HHCCCEEEECCCCCHHHCCCCCCCCC--------------------------------CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 30144798613327100114310013--------------------------------6544628999999999999996
Q gi|255764463|r 120 NIPNIGIITDVALDPFTIHGHDGILC--------------------------------DGEIVNDETIELISHAAVIQAD 167 (337)
Q Consensus 120 ~fpdl~vi~DVcLc~YT~hGHcGi~~--------------------------------~g~IdND~Tl~~L~k~Al~~A~ 167 (337)
. .|.||.|+-+-.-...++...-. .....|+.-...+.....-..+
T Consensus 87 ~--Gi~VilD~V~nH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (344)
T 1ua7_A 87 Y--GIKVIVDAVINHTTFDYAAISNEVKSIPNWTHGNTQIKNWSDRWDVTQNSLLGLYDWNTQNTQVQSYLKRFLERALN 164 (344)
T ss_dssp T--TCEEEEEECCSBCCSCTTTSCHHHHTSTTCEEECCBCCCTTCHHHHHHSBBTTBCEECTTSHHHHHHHHHHHHHHHH
T ss_pred C--CCEEEEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 6--88799985156036887301113556764336888888888854566677678873144772356899999999986
Q ss_pred CCCCEEEC
Q ss_conf 28973524
Q gi|255764463|r 168 AGADIIAP 175 (337)
Q Consensus 168 AGaDivAP 175 (337)
-|.|...-
T Consensus 165 ~~~~~~~~ 172 (344)
T 1ua7_A 165 DGADGFRF 172 (344)
T ss_dssp TTCCEEEE
T ss_pred HHCCEEEE
T ss_conf 41577998
No 84
>>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} (A:)
Probab=65.47 E-value=11 Score=18.74 Aligned_cols=25 Identities=20% Similarity=0.325 Sum_probs=17.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 3288999999999999888936763
Q gi|255764463|r 63 MRMSIDVAVEKIKQVADLGIPAIAI 87 (337)
Q Consensus 63 ~R~Sid~L~~eie~~~~lGI~av~L 87 (337)
.+++.+..++.++.+.++||..+-+
T Consensus 22 ~~~~~~~k~~i~~~L~~~Gv~~iE~ 46 (298)
T 2cw6_A 22 NIVSTPVKIKLIDMLSEAGLSVIET 46 (298)
T ss_dssp SCCCHHHHHHHHHHHHHTTCSEECC
T ss_pred CCCCHHHHHHHHHHHHHHCCCEEEE
T ss_conf 9989999999999999869598993
No 85
>>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A* (A:1-197,A:284-332)
Probab=65.19 E-value=11 Score=18.71 Aligned_cols=42 Identities=14% Similarity=0.210 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHCCCCEEEEC--------CCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 88988887664089879955--------3114589999999624998999
Q gi|255764463|r 241 EAIREASIDIQESADMLLVK--------PGLPYLDVCFRIKEKFGLPTFA 282 (337)
Q Consensus 241 eA~~e~~~D~~EGAD~lMVK--------Pa~~yLDii~~~k~~~~~P~~a 282 (337)
..+.++....+-|+|.|.|. .+.+-+|.|+++++.+++||.+
T Consensus 118 ~t~~~A~~~~~aGad~I~v~G~~~~~~~~~~~~~~~I~ei~~~~~iPVIa 167 (246)
T 2z6i_A 118 PSVALAKRXEKIGADAVIAEGXEAGGHIGKLTTXTLVRQVATAISIPVIA 167 (246)
T ss_dssp SSHHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEE
T ss_pred CCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCEEEEEEE
T ss_conf 76899988887368878851777676621144310020201012001787
No 86
>>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} (A:1-245)
Probab=64.62 E-value=11 Score=18.64 Aligned_cols=85 Identities=14% Similarity=0.119 Sum_probs=43.0
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCC
Q ss_conf 632889999999999998889367633025633455445421576-5379999999997301447986133271001143
Q gi|255764463|r 62 VMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDP-DNLINEGICAIKKNIPNIGIITDVALDPFTIHGH 140 (337)
Q Consensus 62 v~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~-dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGH 140 (337)
..+...+.+.+.++.+.+.|++.+.+++...+-..= .+.+ .-++-++++..+.+ +.|+.-+
T Consensus 19 d~~iD~~~~~~~i~~l~~~Gv~gi~~~G~tgE~~~L-----t~~Er~~l~~~~~~~~~~~---~~v~~g~---------- 80 (245)
T 3eb2_A 19 EGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYL-----GTAQREAVVRATIEAAQRR---VPVVAGV---------- 80 (245)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGC-----CHHHHHHHHHHHHHHHTTS---SCBEEEE----------
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEEECCHHHHC-----CHHHHHHHHHHHHHCCCCC---CEEEEEC----------
T ss_conf 859699999999999997699989985643216559-----8999998876543035443---2047403----------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 1001365446289999999999999962897352
Q gi|255764463|r 141 DGILCDGEIVNDETIELISHAAVIQADAGADIIA 174 (337)
Q Consensus 141 cGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA 174 (337)
. ..+.+...+++-...++|+|.|.
T Consensus 81 ---~-------~~~~~~~ie~a~~a~~~G~d~il 104 (245)
T 3eb2_A 81 ---A-------STSVADAVAQAKLYEKLGADGIL 104 (245)
T ss_dssp ---E-------ESSHHHHHHHHHHHHHHTCSEEE
T ss_pred ---C-------CCCHHHHHHHHHCCCCCCCEEEE
T ss_conf ---4-------55568787754202357950785
No 87
>>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} (A:)
Probab=64.33 E-value=11 Score=18.60 Aligned_cols=217 Identities=11% Similarity=0.030 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHCCCCEEEEE--ECCCCCCCCCCCCCCCCCCC--HHHHHHHHHHHHHC--CCEEEECCCCCHHHCCCC
Q ss_conf 9999999999998889367633--02563345544542157653--79999999997301--447986133271001143
Q gi|255764463|r 67 IDVAVEKIKQVADLGIPAIAIF--PNIPMDLRNNTGSHIIDPDN--LINEGICAIKKNIP--NIGIITDVALDPFTIHGH 140 (337)
Q Consensus 67 id~L~~eie~~~~lGI~av~LF--p~I~~~~Kd~~GseA~n~dg--lv~rAIr~IK~~fp--dl~vi~DVcLc~YT~hGH 140 (337)
.+.+.+.-++-++.|-.-+.-+ ...+..++...-++...+.+ -+..+.+..++... +..|..++- ||...
T Consensus 53 Pe~V~~iH~~Yi~AGAdiI~TnTf~a~~~~l~~~g~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~VagsiG--P~g~~-- 128 (406)
T 1lt8_A 53 PEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQEVNEAAADIARQVADEGDALVAGGVS--QTPSY-- 128 (406)
T ss_dssp HHHHHHHHHHHHHTTCSEEECSCTTCSSCC-------------CHHHHHHHHHHHHHHHTTTTCEEEEEEC--CCHHH--
T ss_pred HHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC--CCCCC--
T ss_conf 89999999999996899999378805799998726234789999999999999987500456702540466--77754--
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHH
Q ss_conf 10013654462899999999999999628973524667677999999999877885773003366643543010167531
Q gi|255764463|r 141 DGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAIS 220 (337)
Q Consensus 141 cGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~ 220 (337)
-+.+.-++-.....+|+..+.++|+|++.---|-| +..++.++....-.+.+++-- -
T Consensus 129 -----~~~~s~~e~~~~~~~q~~~l~~~gvD~il~ET~~~--l~E~~~a~~~~~~~~~Pv~is------~---------- 185 (406)
T 1lt8_A 129 -----LSAKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEH--VEEAVWAVETLIASGKPVAAT------M---------- 185 (406)
T ss_dssp -----HTTCHHHHHHHHHHHHHHHHHHHTCSEEEECCCSC--HHHHHHHHHHHGGGTSCEEEE------E----------
T ss_pred -----CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH--HHHHHHHHHHHHCCCCCEEEE------E----------
T ss_conf -----56898799999999999999854885567999865--899999999987059967899------7----------
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCH-H--HHHHHHHHHH-----HCCCCEEEEECCHHHHHH
Q ss_conf 0244677774431572114788988887664089879955311-4--5899999996-----249989999346189999
Q gi|255764463|r 221 TRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGL-P--YLDVCFRIKE-----KFGLPTFAYQVSGEYAMI 292 (337)
Q Consensus 221 S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~-~--yLDii~~~k~-----~~~~P~~aYqVSGEYami 292 (337)
.|. |-+ .++=....++ +..-...|+|.+.+-=+. | -+.+++.+++ .+.+|+.+|-=+|+..+.
T Consensus 186 ---t~~-~~~--~~~G~~~~~~---~~~~~~~~~~~iGiNC~~gp~~~~~~l~~l~~~~~~~~~~~pl~v~PNaG~~~~~ 256 (406)
T 1lt8_A 186 ---AIG-PEG--DLHGVPPGEA---AVRLVKAGASIIGVNCHFDPTISLKTVKLMKEGLEAAQLKAHLMSQPLAYHTPDA 256 (406)
T ss_dssp ---CCB-TTB--CTTCCCHHHH---HHHHHTTTCSEEEEESSSCHHHHHHHHHHHHHHHHTTTCCCEEEEECCSBCCTTC
T ss_pred ---EEC-CCC--CCCCCCHHHH---HHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCC
T ss_conf ---866-888--7089885999---9997612757560003568899999999999877652456533303662347887
Q ss_pred HHHHHCCC-------------CCHHHHHHHHHHHHHHHCCCEE
Q ss_conf 99998889-------------7889999999999977269999
Q gi|255764463|r 293 KAASLQGW-------------INKNDAMMESLLAFKRAGCDGI 322 (337)
Q Consensus 293 ~~a~~~g~-------------~d~~~~~~E~l~~~kRAGAd~I 322 (337)
.. ..| -.....+-|.+.-+...|+.+|
T Consensus 257 ~~---~~~~~~p~~~~~~~~~~~~p~~~a~~~~~~~~~Gv~ii 296 (406)
T 1lt8_A 257 NK---QGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYI 296 (406)
T ss_dssp CT---TCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHHHTEEEE
T ss_pred CC---CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf 76---67678987767766342588999999999998099985
No 88
>>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} (A:295-566)
Probab=63.74 E-value=11 Score=18.53 Aligned_cols=200 Identities=11% Similarity=0.108 Sum_probs=121.8
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCC
Q ss_conf 86328899999999999988893676330256334554454215765379999999997301447986133271001143
Q gi|255764463|r 61 DVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGH 140 (337)
Q Consensus 61 Gv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGH 140 (337)
+....+.+.+++.+++..+.|-.-+=+-..++. +++ -..+..+|+.+++.+ ++- +|+|.|...=.
T Consensus 39 ~~~~~~~~~~~~~a~~~~~~GAdiIDig~~~~~--~~E--------~~~l~~~v~~l~~~~-~ip----isIDT~~~~v~ 103 (272)
T 1q7z_A 39 EMQKGNEEIVIKEAKTQVEKGAEVLDVNFGIES--QID--------VRYVEKIVQTLPYVS-NVP----LSLDIQNVDLT 103 (272)
T ss_dssp HHHTTCCHHHHHHHHHHHHTTCSEEEEECSSGG--GSC--------HHHHHHHHHHHHHHT-CSC----EEEECCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC--HHH--------HHHHHHHHHHHHHCC-CCC----EEECCCCHHHH
T ss_conf 987443778999999999869987862167641--156--------999999999998538-987----47657879999
Q ss_pred CCCCC--CC-CCCHHHHHH--HHHHHHHHHHHCCCCEEECCC------CCCCHHHHHH---HHHHHCCCC-C----CCEE
Q ss_conf 10013--65-446289999--999999999962897352466------7677999999---999877885-7----7300
Q gi|255764463|r 141 DGILC--DG-EIVNDETIE--LISHAAVIQADAGADIIAPSE------MMDGRVQEIR---KKLDSHGHI-N----VGIM 201 (337)
Q Consensus 141 cGi~~--~g-~IdND~Tl~--~L~k~Al~~A~AGaDivAPSd------MMDGrV~aIR---~~Ld~~g~~-~----~~Im 201 (337)
---++ .| .+.||.|.+ ..-+++-.-++.||-+|.... -++-++..++ +.+.+.|.. + -++.
T Consensus 104 e~aL~~~~G~~iINsis~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gi~~~Ii~DPg~~ 183 (272)
T 1q7z_A 104 ERALRAYPGRSLFNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKALKILERHDFSDRVIFDPGVL 183 (272)
T ss_dssp HHHHHHCSSCCEEEEEESCHHHHHHHHHHHHHHCCEEEEESCSSSCCCSHHHHHHHHHHHHHHHHHTTCGGGEEEECCCC
T ss_pred HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCE
T ss_conf 99999618997266315763147999999986497799985376553018999999999999999569986779979803
Q ss_pred CHHHHHHH--HHHCCHHHHHHCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHH-HHHHHHHHHHHC
Q ss_conf 33666435--430101675310244677-7744315721147889888876640898799553114-589999999624
Q gi|255764463|r 202 PYVAKFNS--SFYGPYRDAISTRDLLKG-DKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLP-YLDVCFRIKEKF 276 (337)
Q Consensus 202 sYsaKfaS--~fYgPFRdA~~S~p~~~g-dr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~-yLDii~~~k~~~ 276 (337)
.-..-..+ .++.=+|..--..|.+.| .++|.-++-+....+...+. =+.-|+|++.|-|.-. .-+.+.......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~g~pil~G~Sn~sf~~~~r~~~~~~~~~~-a~~~G~~~~~~h~v~~~~~~~i~~~~~l~ 261 (272)
T 1q7z_A 184 PLGAEGKPVEVLKTIEFISSKGFNTTVGLSNLSFGLPDRSYYNTAFLVL-GISKGLSSAIMNPLDETLMKTLNATLVIL 261 (272)
T ss_dssp CTTTTCCHHHHHHHHHHHHHTTCEECCBGGGGSTTSTTHHHHHHHHHHH-HHHTTCCEEEECTTCHHHHHHHHHHHHHT
T ss_pred ECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHH-HHHCCCCEEECCCCCHHHHHHHHHHHHHH
T ss_conf 0266846999999999997089987883400016883248999999999-99769984324989788999899999985
No 89
>>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); 2.30A {Arthrobacter SP} (A:)
Probab=63.46 E-value=2.4 Score=23.09 Aligned_cols=69 Identities=12% Similarity=0.150 Sum_probs=32.3
Q ss_pred HHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf 899986347788877331166675898811048887863288999999999999888936763302563
Q gi|255764463|r 25 WIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPM 93 (337)
Q Consensus 25 ~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~ 93 (337)
.++.++.++.|....+-.++|.+........-..=|.+.+..++.+.+.++-+.++|.+.+.+.|+...
T Consensus 73 ~~~~~~~~~Gl~i~~~~~~~~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~~~~~~g~~~ 141 (394)
T 1xla_A 73 DFNQALKDTGLKVPMVTTNLFSHPVFKDGGFTSNDRSIRRFALAKVLHNIDLAAEMGAETFVMWGGREG 141 (394)
T ss_dssp HHHHHHHHHCCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTCE
T ss_pred HHHHHHHHCCCEEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC
T ss_conf 999999853980223347642254554488669799999999999999999999968982687889886
No 90
>>2qiw_A PEP phosphonomutase; NP_600288.1, structural genomics, joint center for structural genomics, JCSG; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032} (A:)
Probab=62.39 E-value=12 Score=18.37 Aligned_cols=49 Identities=18% Similarity=0.168 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCH
Q ss_conf 14788988887664089879955311458999999962499899993461
Q gi|255764463|r 238 NVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSG 287 (337)
Q Consensus 238 n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSG 287 (337)
...|++.-+...++-|||.+++ |+++-++.++.+.+.+..|+.+=...|
T Consensus 166 ~~~e~i~r~~~~~~aGA~~i~~-~~~~~~e~~~~~~~~~~~pv~~~~g~~ 214 (255)
T 2qiw_A 166 PXVEAIKRIKLXEQAGARSVYP-VGLSTAEQVERLVDAVSVPVNITAHPV 214 (255)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEE-CCCCSHHHHHHHHTTCSSCBEEECBTT
T ss_pred CHHHHHHHHHHHHHCCCCEEEE-CCCCCHHHHHHHHHHCCCCEEEEEECC
T ss_conf 5589999999999728983650-279999999999985299858997336
No 91
>>2poz_A Putative dehydratase; octamer, structural genomics, PSI-2, protein structure initiative; 2.04A {Mesorhizobium loti MAFF303099} (A:116-369)
Probab=61.91 E-value=12 Score=18.31 Aligned_cols=129 Identities=16% Similarity=0.065 Sum_probs=76.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEEECCC----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCC
Q ss_conf 8899999999999988893676330256----334554454215765379999999997301-44798613327100114
Q gi|255764463|r 65 MSIDVAVEKIKQVADLGIPAIAIFPNIP----MDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHG 139 (337)
Q Consensus 65 ~Sid~L~~eie~~~~lGI~av~LFp~I~----~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hG 139 (337)
-+.+.+.+.++.+.+.|...|-+=++-+ +-..|+.|...-+.-.++...++++++.++ +..+..|.--.......
T Consensus 21 ~~~e~~~~~a~~~~~~Gf~~vki~~g~~~~~~~~r~~~~g~~~~~~~~~~~e~v~~vr~~vg~~~~l~~d~~~~~~~~~a 100 (254)
T 2poz_A 21 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSXSAEAIELAYRRVKAVRDAAGPEIELXVDLSGGLTTDET 100 (254)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHH
T ss_conf 99899999999999851462105542323566533344345766779999999999998509945885044322122799
Q ss_pred --CC------CCC--CC------------------CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHH
Q ss_conf --31------001--36------------------544628999999999999996289735246676779999999998
Q gi|255764463|r 140 --HD------GIL--CD------------------GEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLD 191 (337)
Q Consensus 140 --Hc------Gi~--~~------------------g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld 191 (337)
.+ |+. .+ --|--++++..+....-...+-++|+|.|.=+.-|-+...++..+
T Consensus 101 ~~~~~~l~~~~~~~~e~p~~~~~~~~~~~l~~~~~~pv~~~e~~~~~~~~~~~i~~~~~d~v~~~~~~~gg~~~~~~i~~ 180 (254)
T 2poz_A 101 IRFCRKIGELDICFVEEPCDPFDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACGIIQPDIGTAGGLXETKKICA 180 (254)
T ss_dssp HHHHHHHGGGCEEEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCSEECCCTTTSSCHHHHHHHHH
T ss_pred HHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHH
T ss_conf 99998621358742115555303566654300435653368655889999998886478699714045674788888899
Q ss_pred HC
Q ss_conf 77
Q gi|255764463|r 192 SH 193 (337)
Q Consensus 192 ~~ 193 (337)
..
T Consensus 181 ~a 182 (254)
T 2poz_A 181 XA 182 (254)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
No 92
>>2e1d_A Transaldolase; pentose phosphate pathway, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Mus musculus} (A:)
Probab=61.86 E-value=12 Score=18.47 Aligned_cols=62 Identities=23% Similarity=0.166 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHCCCCEEECC--C--------------CCCC-----HHHHHHHHHHHCCCCCCCEECHH---HHHH
Q ss_conf 999999999999996289735246--6--------------7677-----99999999987788577300336---6643
Q gi|255764463|r 153 ETIELISHAAVIQADAGADIIAPS--E--------------MMDG-----RVQEIRKKLDSHGHINVGIMPYV---AKFN 208 (337)
Q Consensus 153 ~Tl~~L~k~Al~~A~AGaDivAPS--d--------------MMDG-----rV~aIR~~Ld~~g~~~~~ImsYs---aKfa 208 (337)
.|+---..||+.-|+|||++|+|= - ...| .+..+++.+...|+. |.||+=| ..+.
T Consensus 163 ~TliFS~~Qa~~aa~Aga~~iSpfvgRid~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-T~vl~As~r~~~~v 241 (331)
T 2e1d_A 163 MTLLFSFAQAVACAEAGVTLISPFVGRILDWHVANTDKKSYEPQGDPGVKSVTKIYNYYKKFGYK-TIVMGASFRNTGEI 241 (331)
T ss_dssp EEEECSHHHHHHHHHHTCSEEEEBSHHHHHHHHHHSSCCCCCGGGCHHHHHHHHHHHHHHHTTCC-CEEEEBCCSSHHHH
T ss_pred EEEEECHHHHHHHHHCCCEEEEEEECCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC-CCEECCCCCCHHHH
T ss_conf 78985124345688729749986301302344303442113445650799999999999980957-50432454525578
Q ss_pred HHHHCCH
Q ss_conf 5430101
Q gi|255764463|r 209 SSFYGPY 215 (337)
Q Consensus 209 S~fYgPF 215 (337)
.++.|+-
T Consensus 242 ~~LaG~d 248 (331)
T 2e1d_A 242 KALAGCD 248 (331)
T ss_dssp HTTTTSS
T ss_pred HHHCCCC
T ss_conf 9875995
No 93
>>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, enolase, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} (A:116-354)
Probab=61.77 E-value=12 Score=18.30 Aligned_cols=126 Identities=17% Similarity=0.149 Sum_probs=76.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEECCCCCHHH-------
Q ss_conf 889999999999998889367633025633455445421576537999999999730-144798613327100-------
Q gi|255764463|r 65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI-PNIGIITDVALDPFT------- 136 (337)
Q Consensus 65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f-pdl~vi~DVcLc~YT------- 136 (337)
-+.+.+.+++++..+.|.++|-+=.+...-.+| .+.|+++++.+ |++.++.|.- +.||
T Consensus 23 ~~~e~~~~~~~~~~~~G~~~~Kikvg~~~~~~d-------------~~~i~~ir~~~g~~~~l~vDan-~~~~~~~a~~~ 88 (239)
T 2gdq_A 23 QWISRSVSNVEAQLKKGFEQIKVKIGGTSFKED-------------VRHINALQHTAGSSITMILDAN-QSYDAAAAFKW 88 (239)
T ss_dssp THHHHHHHHHHHHHTTTCCEEEEECSSSCHHHH-------------HHHHHHHHHHHCTTSEEEEECT-TCCCHHHHHTT
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH-------------HHHHHHHHCCCCCEEEEEEECC-CCCCHHHHHHH
T ss_conf 025544314455443153400123457522667-------------7888865203583699997102-25763777888
Q ss_pred -----CCCCCCCCCC------------------CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHC
Q ss_conf -----1143100136------------------54462899999999999999628973524667677999999999877
Q gi|255764463|r 137 -----IHGHDGILCD------------------GEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSH 193 (337)
Q Consensus 137 -----~hGHcGi~~~------------------g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~ 193 (337)
+++..-++.+ --|--|+++..+....-....-.+|++-|--+--|-+...++..+..
T Consensus 89 ~~~l~~~~~~~~~E~p~p~~~~~~~~~l~~~~~~pIa~~E~~~~~~~~~~~i~~~~~d~~~~d~~~~GGit~~~~i~~~a 168 (239)
T 2gdq_A 89 ERYFSEWTNIGWLEEPLPFDQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCLQLA 168 (239)
T ss_dssp HHHHTTCSCEEEEECCSCSSCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHH
T ss_conf 98887512332211221124532000002257985342322334113678887521003521434344255799999999
Q ss_pred CCCCCCEECHH
Q ss_conf 88577300336
Q gi|255764463|r 194 GHINVGIMPYV 204 (337)
Q Consensus 194 g~~~~~ImsYs 204 (337)
--.++++++++
T Consensus 169 ~~~gi~v~~h~ 179 (239)
T 2gdq_A 169 RYFGVRASAHA 179 (239)
T ss_dssp HHHTCEECCCC
T ss_pred HHCCCEEEECC
T ss_conf 87598187268
No 94
>>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, cytoplasm, schiff base, carbohydrate metabolism; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 1hl2_A 1fdy_A 1fdz_A 1nal_1 (A:1-218)
Probab=61.74 E-value=12 Score=18.29 Aligned_cols=28 Identities=7% Similarity=0.006 Sum_probs=17.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf 2889999999999998889367633025
Q gi|255764463|r 64 RMSIDVAVEKIKQVADLGIPAIAIFPNI 91 (337)
Q Consensus 64 R~Sid~L~~eie~~~~lGI~av~LFp~I 91 (337)
..-.+.+.+.++.+.+.|+..+.+++..
T Consensus 28 ~ID~~~~~~~i~~~~~~G~~gi~~~G~t 55 (218)
T 2wkj_A 28 ALDKASLRRLVQFNIQQGIDGLYVGGST 55 (218)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEESSTT
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECEEC
T ss_conf 9399999999999998699989977577
No 95
>>1igw_A Isocitrate lyase; beta barrel; 2.10A {Escherichia coli} (A:)
Probab=61.26 E-value=13 Score=18.24 Aligned_cols=28 Identities=18% Similarity=0.224 Sum_probs=14.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf 8999999999999888936763302563
Q gi|255764463|r 66 SIDVAVEKIKQVADLGIPAIAIFPNIPM 93 (337)
Q Consensus 66 Sid~L~~eie~~~~lGI~av~LFp~I~~ 93 (337)
+...+.+.++...+.|+..+-+-..+++
T Consensus 164 ~~~~v~~~vk~~~~aGi~~i~iEDq~~~ 191 (434)
T 1igw_A 164 GVLNAFELMKAMIEAGAAAVHFEDQLAS 191 (434)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEESBCGG
T ss_pred CHHHHHHHHHHHHHHCCCEEEECCCCHH
T ss_conf 3999999999999809809996067435
No 96
>>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A (A:1-241)
Probab=61.17 E-value=13 Score=18.23 Aligned_cols=164 Identities=13% Similarity=0.208 Sum_probs=95.4
Q ss_pred HHHHHHCCCCEEEEEEC-CCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCC
Q ss_conf 99999888936763302-56334--5544542157653799999999973014479861332710011431001365446
Q gi|255764463|r 74 IKQVADLGIPAIAIFPN-IPMDL--RNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIV 150 (337)
Q Consensus 74 ie~~~~lGI~av~LFp~-I~~~~--Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~Id 150 (337)
.+-+.+.|.+++.+=+. +.... .+..+.- +-+-+...++.|.+..+++-|++|. ++|+-+
T Consensus 31 A~i~e~~G~~ai~~sg~~~a~~~~g~pd~~~~---~~~e~~~~~~~i~~~~~~~PviaD~------d~G~G~-------- 93 (241)
T 3fa4_A 31 ARVALSAGFDALYMTGAGTAASVHGQADLGIC---TLNDMRANAEMISNISPSTPVIADA------DTGYGG-------- 93 (241)
T ss_dssp HHHHHTTTCSCEEECHHHHHHHHHSCCSSSCC---CHHHHHHHHHHHHTTSTTSCEEEEC------TTTTSS--------
T ss_pred HHHHHHCCCCEEEECHHHHHHHCCCCCCCCCC---CHHHHHHHHHHHHHCCCCCCEEEEC------CCCCCC--------
T ss_conf 99999869999993589998456699986634---4899999999876035688657635------666887--------
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEECCCCCC-------------------CHHHHHHHHHHHCCCCCCCEECHHHHHHHHH
Q ss_conf 289999999999999962897352466767-------------------7999999999877885773003366643543
Q gi|255764463|r 151 NDETIELISHAAVIQADAGADIIAPSEMMD-------------------GRVQEIRKKLDSHGHINVGIMPYVAKFNSSF 211 (337)
Q Consensus 151 ND~Tl~~L~k~Al~~A~AGaDivAPSdMMD-------------------GrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~f 211 (337)
.+...+..-.+.+|||+.|-=-|--. +||.++|.+-+..| .+.-|+.
T Consensus 94 ----~~~v~~~v~~l~~aGaagi~IED~~~~k~~~~~~~~~li~~~~~~~~i~aa~~a~~~~~-~d~~i~A--------- 159 (241)
T 3fa4_A 94 ----PIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIG-SDIVVIA--------- 159 (241)
T ss_dssp ----HHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHT-CCCEEEE---------
T ss_pred ----HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-CCEEEEE---------
T ss_conf ----89999999999981972886235668755666665556789999999999999886259-9769996---------
Q ss_pred HCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHC-CCCEEEEECCH
Q ss_conf 01016753102446777744315721147889888876640898799553114589999999624-99899993461
Q gi|255764463|r 212 YGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKF-GLPTFAYQVSG 287 (337)
Q Consensus 212 YgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~-~~P~~aYqVSG 287 (337)
||--.-...-.|++..+....+-|||.+++ |+++-++.+..+.+.. .+|+.+-..++
T Consensus 160 ------------------RTda~~~~~~~eai~Ra~ay~~AGAd~i~~-~~~~~~e~~~~~~~~~~~~p~~~~~~~~ 217 (241)
T 3fa4_A 160 ------------------RTDSLQTHGYEESVARLRAARDAGADVGFL-EGITSREMARQVIQDLAGWPLLLNMVEH 217 (241)
T ss_dssp ------------------EECCHHHHCHHHHHHHHHHHHTTTCSEEEE-TTCCCHHHHHHHHHHTTTSCEEEECCTT
T ss_pred ------------------CCCCCCCCCHHHHHHHHHHHHHCCCCCEEE-ECCCCHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf ------------------455333378999999999855458981674-0579999999999971289730244358
No 97
>>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} (A:)
Probab=61.09 E-value=13 Score=18.22 Aligned_cols=51 Identities=18% Similarity=0.253 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCC----CEEEEECCHHH
Q ss_conf 14788988887664089879955311458999999962499----89999346189
Q gi|255764463|r 238 NVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGL----PTFAYQVSGEY 289 (337)
Q Consensus 238 n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~----P~~aYqVSGEY 289 (337)
-..+|+..+....++|+|.+|.. +.+-.+-+....+.+.. -..+|+-|..|
T Consensus 265 g~~~ai~r~~ay~~~g~~~~f~~-~~~~~~~~~~f~~~v~~~~~~~~~~~~~spsf 319 (429)
T 1f8m_A 265 GIEPCIARAKAYAPFADLIWMET-GTPDLEAARQFSEAVKAEYPDQMLAYNCSPSF 319 (429)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECC-SSCCHHHHHHHHHHHHTTCTTCEEEEECCTTS
T ss_pred CHHHHHHHHHHHHHHHCEEEEEC-CCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCC
T ss_conf 89999999998665117399834-89999999999986188753455103886676
No 98
>>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} (A:1-362)
Probab=60.83 E-value=13 Score=18.19 Aligned_cols=121 Identities=9% Similarity=0.001 Sum_probs=74.2
Q ss_pred CCCCCCHHHHHHH-HHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCH--------HHHHHHHHHHHH-C-CCEEEEC
Q ss_conf 8632889999999-999998889367633025633455445421576537--------999999999730-1-4479861
Q gi|255764463|r 61 DVMRMSIDVAVEK-IKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNL--------INEGICAIKKNI-P-NIGIITD 129 (337)
Q Consensus 61 Gv~R~Sid~L~~e-ie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dgl--------v~rAIr~IK~~f-p-dl~vi~D 129 (337)
-.+..+...+.++ ++.+.+|||++|-|-|+.+.......+...|++-++ -....|.+-++. . .|.||.|
T Consensus 15 ~~~~g~~~gi~~~lldyl~~LGv~~I~L~Pi~~~~~~~~~~~~GY~~~d~~~id~~~Gt~~~~k~lv~~~H~~Gi~VilD 94 (362)
T 1jae_A 15 HLFEWKWNDIADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDMTRRCNDAGVRIYVD 94 (362)
T ss_dssp EETTCCHHHHHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHHHHHHHHTTCEEEEE
T ss_pred EECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 95046389999999999997399889959282377789987654477745554777899999999999999879989999
Q ss_pred CCCCHHHCCCCC----------------------------CC----------------CCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 332710011431----------------------------00----------------1365446289999999999999
Q gi|255764463|r 130 VALDPFTIHGHD----------------------------GI----------------LCDGEIVNDETIELISHAAVIQ 165 (337)
Q Consensus 130 VcLc~YT~hGHc----------------------------Gi----------------~~~g~IdND~Tl~~L~k~Al~~ 165 (337)
+.+=.....+.. .. ..+-.-.|....+.+.......
T Consensus 95 ~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 174 (362)
T 1jae_A 95 AVINHMTGMNGVGTSGSSADHDGMNYPAVPYGSGDFHSPCEVNNYQDADNVRNCELVGLRDLNQGSDYVRGVLIDYMNHM 174 (362)
T ss_dssp ECCSBCCSSCEEBTTSCEEBTTTTBBTTTTBCGGGBCCCCBCCCTTCHHHHHHSBBTTBCBBCTTSHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 63454657676656555468875557767776554689988677888644245666777701669999999999999878
Q ss_pred HHCCCCEEECCCCCCC
Q ss_conf 9628973524667677
Q gi|255764463|r 166 ADAGADIIAPSEMMDG 181 (337)
Q Consensus 166 A~AGaDivAPSdMMDG 181 (337)
.+.|+|..-.-....-
T Consensus 175 ~~~g~dg~r~d~~~~~ 190 (362)
T 1jae_A 175 IDLGVAGFRVDAAKHM 190 (362)
T ss_dssp HHTTCCEEEETTGGGS
T ss_pred HHHCCCCEEECCCCCC
T ss_conf 8744673230210024
No 99
>>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} (A:1-333)
Probab=60.61 E-value=13 Score=18.16 Aligned_cols=43 Identities=19% Similarity=0.195 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHCCCCEEEECCCH---------------HHHHHHHHHHHHCCCCEEE
Q ss_conf 788988887664089879955311---------------4589999999624998999
Q gi|255764463|r 240 QEAIREASIDIQESADMLLVKPGL---------------PYLDVCFRIKEKFGLPTFA 282 (337)
Q Consensus 240 ~eA~~e~~~D~~EGAD~lMVKPa~---------------~yLDii~~~k~~~~~P~~a 282 (337)
.+.+.=+..-.+-|+|.|-|-++. .++++++.+++.+.+|+.+
T Consensus 228 ~~~~~~~~~l~~~g~d~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvi~ 285 (333)
T 1ps9_A 228 AETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVT 285 (333)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 9999999999982873030223543456765567765116699999997415777898
No 100
>>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, cytoplasm; 2.00A {Neisseria meningitidis serogroup B} (A:)
Probab=60.41 E-value=13 Score=18.14 Aligned_cols=117 Identities=11% Similarity=0.090 Sum_probs=60.8
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCC
Q ss_conf 8632889999999999998889367633025633455445421576-537999999999730144798613327100114
Q gi|255764463|r 61 DVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDP-DNLINEGICAIKKNIPNIGIITDVALDPFTIHG 139 (337)
Q Consensus 61 Gv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~-dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hG 139 (337)
...+...+.+.+.++.+.+.|+..+.+++.+.+-..=. ..+ ..++..+++..|.. +.|++-|.
T Consensus 21 ~d~~iD~~~~~~~i~~l~~~Gv~gi~~~GstGE~~~Lt-----~~Er~~~~~~~~~~~~~~---~~vi~gv~-------- 84 (297)
T 3flu_A 21 QDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLS-----VEEHTAVIEAVVKHVAKR---VPVIAGTG-------- 84 (297)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSC-----HHHHHHHHHHHHHHHTTS---SCEEEECC--------
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEECEECCCHHHCC-----HHHHHHHHHHHHHHCCCC---CCEECCCC--------
T ss_conf 89596999999999999976999899683042354498-----999999999999870465---41321666--------
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE--CCCCCC----CHHHHHHHHHHHCCCCCCCEECHHHHHH
Q ss_conf 31001365446289999999999999962897352--466767----7999999999877885773003366643
Q gi|255764463|r 140 HDGILCDGEIVNDETIELISHAAVIQADAGADIIA--PSEMMD----GRVQEIRKKLDSHGHINVGIMPYVAKFN 208 (337)
Q Consensus 140 HcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA--PSdMMD----GrV~aIR~~Ld~~g~~~~~ImsYsaKfa 208 (337)
..|.+...++|....++|||.|. |-..-. +.+..-++..+. .+.+|+=|-.-.+
T Consensus 85 ------------~~s~~~~i~~a~~a~~~Gad~v~v~pP~~~~~~~~~i~~~~~~i~~a---~~~pi~iYn~P~~ 144 (297)
T 3flu_A 85 ------------ANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEA---TSIPMIIYNVPGR 144 (297)
T ss_dssp ------------CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH---CCSCEEEEECHHH
T ss_pred ------------CCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHC---CCCCEEEEECCCC
T ss_conf ------------53299999999999980988547337878898999999999999855---7998899978864
No 101
>>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample} (A:128-360)
Probab=60.29 E-value=13 Score=18.13 Aligned_cols=132 Identities=15% Similarity=0.134 Sum_probs=76.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCC------
Q ss_conf 8786328899999999999988893676330256334554454215765379999999997301-447986133------
Q gi|255764463|r 59 MPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVA------ 131 (337)
Q Consensus 59 MPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVc------ 131 (337)
..+..--+.+.+.+++++..+.|.++|-+-.+...-.+| -+.|+++++.++ ++.++.|.-
T Consensus 15 ~~~~~~~~~e~~~~~~~~~~~~G~~~~Kik~g~~~~~~d-------------~~~i~~ir~~~g~~~~l~~Dan~~~~~~ 81 (233)
T 2qgy_A 15 CWSDLKKDTNDYLRQIEKFYGKKYGGIKIYPMLDSLSIS-------------IQFVEKVREIVGDELPLMLDLAVPEDLD 81 (233)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHTTCSCEEECCCCSSHHHH-------------HHHHHHHHHHHCSSSCEEEECCCCSCHH
T ss_pred ECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH-------------HHHHHHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 023233225666656677654213543233435677764-------------3466666555431001103432230169
Q ss_pred --------------------CCHHHCCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHH
Q ss_conf --------------------27100114310013--65446289999999999999962897352466767799999999
Q gi|255764463|r 132 --------------------LDPFTIHGHDGILC--DGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKK 189 (337)
Q Consensus 132 --------------------Lc~YT~hGHcGi~~--~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~ 189 (337)
+.+.+..|+.=+-. .-.|--|+++.......-...+-.+|+|-|-=+--|-+...++.
T Consensus 82 ~A~~~~~~l~~~~~~~iEeP~~~~d~~~~~~l~~~~~~pia~dE~~~~~~~~~~~i~~~~~d~v~~~~~~~GGit~~~~~ 161 (233)
T 2qgy_A 82 QTKSFLKEVSSFNPYWIEEPVDGENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLIDIIEI 161 (233)
T ss_dssp HHHHHHHHHGGGCCSEEECSSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHH
T ss_pred HHHHHHHHHHCCCEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHH
T ss_conf 99999876302340230476422110012112434563322686331002101223344212664123322535689999
Q ss_pred HHHCCCCCCCEECH
Q ss_conf 98778857730033
Q gi|255764463|r 190 LDSHGHINVGIMPY 203 (337)
Q Consensus 190 Ld~~g~~~~~ImsY 203 (337)
.+...-.++.++..
T Consensus 162 ~~~a~~~gi~~~~h 175 (233)
T 2qgy_A 162 SNEASNNGIFISPH 175 (233)
T ss_dssp HHHHHHTTCEECCB
T ss_pred HHHHHHCCCEEEEE
T ss_conf 99998569449985
No 102
>>3h12_A Mandelate racemase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium nysgxrc; 1.50A {Bordetella bronchiseptica} (A:131-348)
Probab=60.15 E-value=13 Score=18.11 Aligned_cols=136 Identities=13% Similarity=0.155 Sum_probs=82.3
Q ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCC--
Q ss_conf 04888786328899999999999988893676330256334554454215765379999999997301-447986133--
Q gi|255764463|r 55 SINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVA-- 131 (337)
Q Consensus 55 ~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVc-- 131 (337)
++..--....-+.+.+.+++++.++.|.++|-+-.+.+.. .|. ..|+++++.+| ++-++.|.-
T Consensus 10 ~vy~s~~~~~~~~e~~~~~~~~~~~~G~~~~KiK~g~~~~-~d~-------------~~i~a~r~~~g~~~~l~iDan~~ 75 (218)
T 3h12_A 10 RAYASSIYWDLTPDQAADELAGWVEQGFTAAKLKVGRAPR-KDA-------------ANLRAMRQRVGADVEILVDANQS 75 (218)
T ss_dssp EEEEEEECSSCCHHHHHHHHHHHHHHTCSEEEEECCSCHH-HHH-------------HHHHHHHHHHCSSSEEEEECTTC
T ss_pred CEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCH-HHH-------------HHHHHHHHHCCCCCEEEECCCCC
T ss_conf 0000002346416899998766665077641773215734-778-------------89999986539842574044445
Q ss_pred ------------------------CCHHHCCCCCCCCCC---CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHH
Q ss_conf ------------------------271001143100136---54462899999999999999628973524667677999
Q gi|255764463|r 132 ------------------------LDPFTIHGHDGILCD---GEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQ 184 (337)
Q Consensus 132 ------------------------Lc~YT~hGHcGi~~~---g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~ 184 (337)
+.+-...|+=-+... --|--|+++..+....-....-.+|++-|.=+--|-+.
T Consensus 76 ~~~~~A~~~~~~l~~~~~~~iEeP~~~~~~~~~~~l~~~~~~~pia~~E~~~~~~~~~~~i~~~a~d~i~~~~~~~GGit 155 (218)
T 3h12_A 76 LGRHDALAMLRILDEAGCYWFEEPLSIDDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRAGGIT 155 (218)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEESCSCTTCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHH
T ss_pred CCCCCCCHHCCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCHH
T ss_conf 32234310000223467502306777212330122212355662220222103688888777640653334531331025
Q ss_pred HHHHHHHHCCCCCCCEECHH
Q ss_conf 99999987788577300336
Q gi|255764463|r 185 EIRKKLDSHGHINVGIMPYV 204 (337)
Q Consensus 185 aIR~~Ld~~g~~~~~ImsYs 204 (337)
..++..+.+.-.++.+++.+
T Consensus 156 ~~~~i~~~A~~~gi~v~~~~ 175 (218)
T 3h12_A 156 EALAISASAASAHLAWNPHT 175 (218)
T ss_dssp HHHHHHHHHHHTTCEECCCC
T ss_pred HHHHHHHHHHHCCCEEEECC
T ss_conf 66579999986797497368
No 103
>>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} (A:143-285)
Probab=59.92 E-value=13 Score=18.09 Aligned_cols=66 Identities=18% Similarity=0.161 Sum_probs=43.4
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 572114788988887664089879955311458999999962-4998999934618999999998889788999999999
Q gi|255764463|r 234 LDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEK-FGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLL 312 (337)
Q Consensus 234 md~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~-~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~ 312 (337)
+.+.+..|+ ..-...|||++++=|..|-- .-...+.. .++|+.| -|-+++ |.+.
T Consensus 71 ~s~~t~~e~----~~a~~~gad~I~l~~v~p~~-~~~~~~~~~~~ipi~a---------------~GGI~~-----~~i~ 125 (143)
T 1qap_A 71 VEVENLDEL----DDALKAGADIIMLDNFNTDQ-MREAVKRVNGQARLEV---------------SGNVTA-----ETLR 125 (143)
T ss_dssp EEESSHHHH----HHHHHTTCSEEEESSCCHHH-HHHHHHTTCTTCCEEE---------------CCCSCH-----HHHH
T ss_pred EECHHHHHH----HHHHHCCCCEEEECCCCHHH-HHHHHHHHCCCEEEEE---------------ECCCCH-----HHHH
T ss_conf 842178888----77764598788864899899-9999998589679999---------------799999-----9999
Q ss_pred HHHHHCCCEEEE
Q ss_conf 997726999982
Q gi|255764463|r 313 AFKRAGCDGIFT 324 (337)
Q Consensus 313 ~~kRAGAd~Iit 324 (337)
.++.||||.|..
T Consensus 126 ~~~~aGad~v~~ 137 (143)
T 1qap_A 126 EFAETGVDFISV 137 (143)
T ss_dssp HHHHTTCSEEEC
T ss_pred HHHHCCCCEEEC
T ss_conf 999759899982
No 104
>>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MCSG, protein structure initiative; 1.20A {Agrobacterium tumefaciens str} (A:1-228)
Probab=59.74 E-value=13 Score=18.06 Aligned_cols=187 Identities=17% Similarity=0.123 Sum_probs=112.7
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCC
Q ss_conf 6328899999999999988893676330256334554454215765379999999997301-447986133271001143
Q gi|255764463|r 62 VMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGH 140 (337)
Q Consensus 62 v~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGH 140 (337)
-.....+.+.+.++.+.+.|++.+.+.+.+.+-.. +++ .=-.+.++...+..+ ++.|++-|.
T Consensus 18 d~~iD~~~~~~~i~~l~~~G~~gi~v~G~tGE~~~-------Ls~-~Er~~v~~~~~~~~~~~~~vi~gv~--------- 80 (228)
T 3b4u_A 18 DGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCS-------VGS-RERQAILSSFIAAGIAPSRIVTGVL--------- 80 (228)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGG-------SCH-HHHHHHHHHHHHTTCCGGGEEEEEC---------
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECEECCCHHH-------CCH-HHHHHHHHHHHHHCCCCCCCCCCCC---------
T ss_conf 95979999999999999779999997921656545-------899-9999998873442133422345765---------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE---CC----CCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHC
Q ss_conf 1001365446289999999999999962897352---46----6767799999999987788577300336664354301
Q gi|255764463|r 141 DGILCDGEIVNDETIELISHAAVIQADAGADIIA---PS----EMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYG 213 (337)
Q Consensus 141 cGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA---PS----dMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYg 213 (337)
. .+.+.-.+.|....++|||.+- |. ...+|.+...+..++..+..+++|+=|-....+.
T Consensus 81 ----~-------~~~~~~i~~a~~a~~~Gad~~l~~~P~~~~~~~~~~i~~~~~~i~~a~~~~~lpi~lYn~P~~~g--- 146 (228)
T 3b4u_A 81 ----V-------DSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTM--- 146 (228)
T ss_dssp ----C-------SSHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHS---
T ss_pred ----C-------CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHH---
T ss_conf ----5-------54688888788887632345433468545770577899999999864124422131136321304---
Q ss_pred CHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHH
Q ss_conf 016753102446777744315721147889888876640898799553114589999999624-9989999346189999
Q gi|255764463|r 214 PYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMI 292 (337)
Q Consensus 214 PFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami 292 (337)
+.+++ +-+.+... ...--++-+|=+.+-+..++.+++.. ++.+.. |+
T Consensus 147 ------------------~~~~~----~~~~~L~~--~~~~~i~g~K~~~~~~~~~~~~~~~~~~~~v~~----G~---- 194 (228)
T 3b4u_A 147 ------------------VTLSV----ELVGRLKA--AFPGIVTGVKDSSGNWSHTERLLKEHGDLAILI----GD---- 194 (228)
T ss_dssp ------------------CCCCH----HHHHHHHH--HCTTTEEEEEECCCCHHHHHHHHHHHTTSEEEE----CC----
T ss_pred ------------------HHHHH----HHHHHHHH--CCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCC----CC----
T ss_conf ------------------55325----88899875--033323788436740355434431244432346----86----
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECH
Q ss_conf 9999888978899999999999772699998201
Q gi|255764463|r 293 KAASLQGWINKNDAMMESLLAFKRAGCDGIFTYF 326 (337)
Q Consensus 293 ~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~ 326 (337)
+ +.+....++|++..+|=.
T Consensus 195 -----------d----~~~~~~l~~G~~G~is~~ 213 (228)
T 3b4u_A 195 -----------E----RDLARGVRLGGQGAISGV 213 (228)
T ss_dssp -----------H----HHHHHHHHTTCCEEEESG
T ss_pred -----------C----CCCCHHHCCCCCEEECCH
T ss_conf -----------4----322313326887253537
No 105
>>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A* (A:1-50,A:84-250)
Probab=59.48 E-value=14 Score=18.03 Aligned_cols=196 Identities=12% Similarity=0.019 Sum_probs=118.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HHCCCCEEECCCC
Q ss_conf 542157653799999999973014479861332710011431001365446289999999999999-9628973524667
Q gi|255764463|r 100 GSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQ-ADAGADIIAPSEM 178 (337)
Q Consensus 100 GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~-A~AGaDivAPSdM 178 (337)
|....-|+|=+.---++++.-+ =.|-+||.+ |.+|.==+.||- .|++-+.+..-.. ..-=.++=.|...
T Consensus 10 g~~~~~~e~t~~~~~~~~~~~~--~~~e~d~~~---~~d~~~~~~hDI-----pTL~e~l~~~~~~~v~l~iEiK~~~~~ 79 (217)
T 3ks6_A 10 GGTLEFGDSTPHGFTATAAXAL--EEVEFDLHP---TADGAIVVHHHP-----XTLEELCALYVDSHVNFRCEIKPGVDG 79 (217)
T ss_dssp TTHHHHCTTCHHHHHHHHTSSS--SEEEEEEEE---CTTSCEEECSCC-----EEHHHHHHHHTTCSCEEEEEECCCTTS
T ss_pred CCCCCCCCCHHHHHHHHHHCCC--CEEEEEEEE---ECCCCEEEECCC-----CCHHHHHHHHHCCCCCCEEEECCCCCC
T ss_conf 9999998534999999998598--989987899---029968997478-----989999999751587631410366433
Q ss_pred CC--CHHHHHHHHHHHCCCCC-CCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHH-HHHHHHHHHCCC
Q ss_conf 67--79999999998778857-730033666435430101675310244677774431572114788-988887664089
Q gi|255764463|r 179 MD--GRVQEIRKKLDSHGHIN-VGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEA-IREASIDIQESA 254 (337)
Q Consensus 179 MD--GrV~aIR~~Ld~~g~~~-~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA-~~e~~~D~~EGA 254 (337)
+. +-+..+-+.|.+.|..+ +.|.|........ +|... |.+ +..|-.......+. ......-..-|+
T Consensus 80 ~~~~~~~~~vl~~l~~~g~~~rv~i~SFd~~~l~~----~~~~~---p~~---~~~~L~~~~~~~~~~~~~~~~~~~~~~ 149 (217)
T 3ks6_A 80 LPYEGFVALVIAGLERHSXLERTTFSSFLLASXDE----LWKAT---TRP---RLWLVSPSVLQQLGPGAVIETAIAHSI 149 (217)
T ss_dssp CCCTTHHHHHHHHHHHTTCGGGEEEEESCHHHHHH----HHHHC---CSC---EEEEECHHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHH----HHHHC---CCC---CEEEEEHHHHHCCCHHHHHHHHHHCCC
T ss_conf 31678999999999851676652785088999999----99858---887---289960124320337889988763322
Q ss_pred CEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHH
Q ss_conf 87995531145899999996249989999346189999999988897889999999999977269999820189999998
Q gi|255764463|r 255 DMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAARIL 334 (337)
Q Consensus 255 D~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~~L 334 (337)
|.+-+---+..-.++..+++ -++.+.+|-| |.+ +.+.-+.+.|.|.|+|=+.-.+.++|
T Consensus 150 ~~v~~~~~~~~~~lv~~a~~-~Gl~V~~WTv----------------n~~----~~~~~~~~~GVDgI~TD~P~~~~~~l 208 (217)
T 3ks6_A 150 HEIGVHIDTADAGLXAQVQA-AGLDFGCWAA----------------HTP----SQITKALDLGVKVFTTDRPTLAIALR 208 (217)
T ss_dssp CEEEEEGGGCCHHHHHHHHH-TTCEEEEECC----------------CSH----HHHHHHHHHTCSEEEESCHHHHHHHH
T ss_pred CEEECCCCCCCHHHHHHHHH-CCCEEEEECC----------------CCH----HHHHHHHHCCCCEEEECCHHHHHHHH
T ss_conf 54232523279999999998-6999999889----------------959----99999997699999989699999999
Q ss_pred HC
Q ss_conf 50
Q gi|255764463|r 335 TH 336 (337)
Q Consensus 335 ~~ 336 (337)
++
T Consensus 209 ~~ 210 (217)
T 3ks6_A 209 TE 210 (217)
T ss_dssp HH
T ss_pred HH
T ss_conf 97
No 106
>>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A* (A:117-211)
Probab=59.30 E-value=13 Score=18.07 Aligned_cols=81 Identities=17% Similarity=0.224 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE-E
Q ss_conf 799999999987788577300336664354301016753102446777744315721147889888876640898799-5
Q gi|255764463|r 181 GRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLL-V 259 (337)
Q Consensus 181 GrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lM-V 259 (337)
-.-..+++.|.++||.=+.+-+. ....++.-...++..-.+++++...| ..+||.+. .
T Consensus 13 ~v~~~~~~~~~~~G~eV~~~~~l--------------------~~~~~~~ia~i~~~~i~~~~~~~~~d-~p~adai~is 71 (95)
T 3ixl_A 13 DVNERLAAFLAEESLVPTGXRSL--------------------GITGVEAMARVDTATLVDLCVRAFEA-APDSDGILLS 71 (95)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEC--------------------CCCCHHHHHTCCHHHHHHHHHHHHHT-STTCSEEEEE
T ss_pred HHHHHHHHHHHHCCCEECCEEEC--------------------CCCCCHHHCCCCHHHHHHHHHHHHHC-CCCCCEEEEE
T ss_conf 98799999999879733031102--------------------78852654037999999999999741-8998789984
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 53114589999999624998999
Q gi|255764463|r 260 KPGLPYLDVCFRIKEKFGLPTFA 282 (337)
Q Consensus 260 KPa~~yLDii~~~k~~~~~P~~a 282 (337)
=-+|+-+++|.++.+.+++||..
T Consensus 72 CTnlrt~~~i~~lE~~lG~PVis 94 (95)
T 3ixl_A 72 SGGLLTLDAIPEVERRLGVPVVS 94 (95)
T ss_dssp CTTSCCTTHHHHHHHHHSSCEEE
T ss_pred CCCCCHHHHHHHHHHHHCCCEEE
T ss_conf 78853788999999998988986
No 107
>>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A (G:129-367)
Probab=57.97 E-value=8.9 Score=19.28 Aligned_cols=67 Identities=12% Similarity=0.026 Sum_probs=42.4
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEC
Q ss_conf 104888786328899999999999988893676330256334554454215765379999999997301-4479861
Q gi|255764463|r 54 ESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITD 129 (337)
Q Consensus 54 ~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~D 129 (337)
..|+.---+...+.+.+.++++++.+.|.++|-+-.+.+....+. .-..+.++.+++.++ ++-++.|
T Consensus 5 ~~ip~y~s~~~~~~~~~~~~~~~~~~~Gf~~~Kikig~~~~~~~~---------~~d~~~i~~~r~~~g~~~~l~~D 72 (239)
T 3fv9_G 5 GPVPVISSIGGDTPEAMRAKVARHRAQGFKGHSIKIGASEAEGGP---------ALDAERITACLADRQPGEWYLAD 72 (239)
T ss_dssp SCBCEEEEECSCCHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHH---------HHHHHHHHHHTTTCCTTCEEEEE
T ss_pred CEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCH---------HHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 011010123568979999999863303641453204787655670---------66799999989873888526443
No 108
>>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, , PSI-2, protein structure initiative; 1.80A {Bacillus clausii ksm-k16} (A:1-217)
Probab=57.72 E-value=14 Score=17.84 Aligned_cols=166 Identities=14% Similarity=0.099 Sum_probs=89.3
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCC
Q ss_conf 32889999999999998889367633025633455445421576537999999999730144798613327100114310
Q gi|255764463|r 63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDG 142 (337)
Q Consensus 63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcG 142 (337)
.+...+.+.+.++.+.+.|++.+.+++...+-. . + ...--.+.++...+..+...++.-+.
T Consensus 28 ~~iD~~~~~~~i~~~~~~Gv~gi~v~G~tGE~~-~------L-t~~Er~~~i~~~~~~~~~~~~i~g~~----------- 88 (217)
T 3e96_A 28 GSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFY-A------L-SLEEAKEEVRRTVEYVHGRALVVAGI----------- 88 (217)
T ss_dssp CCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGG-G------S-CHHHHHHHHHHHHHHHTTSSEEEEEE-----------
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECEECCCHH-H------C-CHHHHHHHHHHHHHHHCCCCEEEECC-----------
T ss_conf 889999999999999976999999684566621-3------7-99999999999999829973274144-----------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE--ECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHH
Q ss_conf 0136544628999999999999996289735--24667677999999999877885773003366643543010167531
Q gi|255764463|r 143 ILCDGEIVNDETIELISHAAVIQADAGADII--APSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAIS 220 (337)
Q Consensus 143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv--APSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~ 220 (337)
. .+.+...+++...+++|+|.+ .|..-..-.-.. .|.=|++.+.
T Consensus 89 --~-------~~t~~~i~~a~~a~~~Ga~~~lv~~P~~~~~~~~~-------------------------i~~~~~~i~~ 134 (217)
T 3e96_A 89 --G-------YATSTAIELGNAAKAAGADAVMIHMPIHPYVTAGG-------------------------VYAYFRDIIE 134 (217)
T ss_dssp --C-------SSHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHHH-------------------------HHHHHHHHHH
T ss_pred --C-------CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH-------------------------HHHHHHHHHH
T ss_conf --3-------31246777777776414431235687423210677-------------------------7889998876
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCC--CCEEEEECCHH
Q ss_conf 024467777443157211478898888766408987995531145899999996249--98999934618
Q gi|255764463|r 221 TRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFG--LPTFAYQVSGE 288 (337)
Q Consensus 221 S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~--~P~~aYqVSGE 288 (337)
+.+.- -==|+.+..-.-+-++ .+.+=--++.+|-+.+-+.-+.+++..+. .++..|.-.+|
T Consensus 135 ~~~~p---iiiYn~P~~~~~~~~~----~L~~~~~ivgiK~~~~~~~~~~~~~~~~~~~~~~~v~~g~d~ 197 (217)
T 3e96_A 135 ALDFP---SLVYFKDPEISDRVLV----DLAPLQNLVGVKYAINDLPRFAKVVRSIPEEHQIAWICGTAE 197 (217)
T ss_dssp HHTSC---EEEEECCTTSCTHHHH----HHTTCTTEEEEEECCCCHHHHHHHHTTSCGGGCCEEEETTCT
T ss_pred HHCCC---CCCCCCCCCHHHHHHH----HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 52244---2330145414889999----997064412010244431066789988652132111245532
No 109
>>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831} (A:1-217)
Probab=57.61 E-value=15 Score=17.83 Aligned_cols=169 Identities=10% Similarity=0.058 Sum_probs=81.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCC
Q ss_conf 32889999999999998889367633025633455445421576537999999999730144798613327100114310
Q gi|255764463|r 63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDG 142 (337)
Q Consensus 63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcG 142 (337)
...-.+.+.+.++.+.+.|++++.+++.+.+-. +++ .---.+.++.+.+..++..++.-+. +
T Consensus 28 ~~iD~~~~~~~i~~l~~~Gv~gi~v~GstGE~~-------~Ls-~~Er~~~~~~~~~~~~~~~~i~~~~--------~-- 89 (217)
T 3d0c_A 28 REIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFY-------ALT-IEEAKQVATRVTELVNGRATVVAGI--------G-- 89 (217)
T ss_dssp CCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGG-------GSC-HHHHHHHHHHHHHHHTTSSEEEEEE--------C--
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECEECCCHH-------HCC-HHHHHHHHHHHHHHHCCCCEEEEEE--------C--
T ss_conf 983999999999999976999899684153743-------489-9999999999999818996089762--------7--
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCC
Q ss_conf 01365446289999999999999962897352466767799999999987788577300336664354301016753102
Q gi|255764463|r 143 ILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTR 222 (337)
Q Consensus 143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~ 222 (337)
.+.+...+++-...++|+|.|.-.-.+ |..--....|.=||+.++..
T Consensus 90 ----------~st~~~ie~~~~a~~~Ga~~vli~~P~-----------------------~~~~~~~~i~~~~~~i~~a~ 136 (217)
T 3d0c_A 90 ----------YSVDTAIELGKSAIDSGADCVXIHQPV-----------------------HPYITDAGAVEYYRNIIEAL 136 (217)
T ss_dssp ----------SSHHHHHHHHHHHHHTTCSEEEECCCC-----------------------CSCCCHHHHHHHHHHHHHHS
T ss_pred ----------CCHHHHHHHHHHHHHCCCCEEEECCCC-----------------------CCCCCHHHHHHHHHHHHHHC
T ss_conf ----------989999999999997599989973787-----------------------89989999999999999856
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHC--CCCEEEEECCHHH
Q ss_conf 446777744315721147889888876640898799553114589999999624--9989999346189
Q gi|255764463|r 223 DLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKF--GLPTFAYQVSGEY 289 (337)
Q Consensus 223 p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~--~~P~~aYqVSGEY 289 (337)
+.- -==|+.+..-.-+-+. .+.+-.-++.+|-+-+-+.-+.++.... .-++..|--++|+
T Consensus 137 ~~p---i~iYn~P~~~~~~~~~----~la~~p~i~giK~~~~~~~~~~~~~~~~~~~~~~~i~~G~~~~ 198 (217)
T 3d0c_A 137 DAP---SIIYFKDAHLSDDVIK----ELAPLDKLVGIKYAINDIQRVTQVXRAVPKSSNVAFICGTAEK 198 (217)
T ss_dssp SSC---EEEEECCTTSCTHHHH----HHTTCTTEEEEEECCCCHHHHHHHHHHSCGGGCCEEEETTHHH
T ss_pred CCC---EEEEECCCCCCHHHHH----HHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCHHH
T ss_conf 999---8999679987088999----9970798889842789889999999966778894588176788
No 110
>>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} (A:523-742,A:762-821)
Probab=57.50 E-value=13 Score=18.21 Aligned_cols=61 Identities=10% Similarity=0.062 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHCC-CEE
Q ss_conf 8999999999999888936763302563345-544542157653799999999973014-479
Q gi|255764463|r 66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLR-NNTGSHIIDPDNLINEGICAIKKNIPN-IGI 126 (337)
Q Consensus 66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~K-d~~GseA~n~dglv~rAIr~IK~~fpd-l~v 126 (337)
.++...+..+.+.+.|...|-+...-+...- ...|....+..-++...++.+++.++. +.|
T Consensus 124 ~~~~~~~aa~~~~~~g~d~Iein~~~~~~~~~~~~g~~~~~~~~~~~e~i~~v~~~~~~pv~v 186 (280)
T 1gte_A 124 NKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFA 186 (280)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEE
T ss_pred CHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
T ss_conf 999999999974535888899976789998743334311016899999999986178998799
No 111
>>3lb0_A 3-dehydroquinate dehydratase; AROD, shikimate pathway, IDP90922, csgid, citrate, amino-acid biosynthesis; HET: CIT; 1.65A {Salmonella enterica subsp} PDB: 3l2i_A* 1gqn_A 1l9w_A* 1qfe_A* (A:)
Probab=57.25 E-value=15 Score=17.79 Aligned_cols=185 Identities=17% Similarity=0.185 Sum_probs=96.5
Q ss_pred ECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf 75898811048887863288999999999999888936763302563345544542157653799999999973014479
Q gi|255764463|r 47 TSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGI 126 (337)
Q Consensus 47 ~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~v 126 (337)
+-|.+.+.-+-++++- +++.+..++.++...|+-.|=+= ++ ...+ .++.+-+...+..||+..+++-|
T Consensus 34 ~~~~~~p~i~v~i~~~---~~~e~~~~~~~~~~~~~D~VE~R--lD-~l~~------~~~~~~i~~~~~~lr~~~~~~Pi 101 (276)
T 3lb0_A 34 VVGEGAPKIIVSLMGK---TITDVKSEALAYREADFDILEWR--VD-HFAN------VTTAESVLEAAGAIREIITDKPL 101 (276)
T ss_dssp EETSSSCEEEEEECCS---SHHHHHHHHHHHHTSCCSEEEEE--GG-GCTT------TTCHHHHHHHHHHHHHHCCSSCE
T ss_pred EECCCCCEEEEEECCC---CHHHHHHHHHHHHHCCCCEEEEE--EC-CCCC------CCCHHHHHHHHHHHHHHCCCCCE
T ss_conf 9759997899997899---99999999998720799989998--62-3677------79889999999999973689968
Q ss_pred EECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC-CCEEECCCCCCC-HHHHHHHHHHHCCCCCCCEECHH
Q ss_conf 8613327100114310013654462899999999999999628-973524667677-99999999987788577300336
Q gi|255764463|r 127 ITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAG-ADIIAPSEMMDG-RVQEIRKKLDSHGHINVGIMPYV 204 (337)
Q Consensus 127 i~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AG-aDivAPSdMMDG-rV~aIR~~Ld~~g~~~~~ImsYs 204 (337)
|.- +-+...-|.. .++.++=++.|.. .++.| +|+|-=---++- .+..+.+..-+.+. ..|+||-
T Consensus 102 I~T-----~R~~~eGG~~---~~~~~~~~~ll~~----~~~~~~~d~iDiEl~~~~~~~~~l~~~~~~~~~--kiI~S~H 167 (276)
T 3lb0_A 102 LFT-----FRSAKEGGEQ---ALTTGQYIDLNRA----AVDSGLVDMIDLELFTGDDEVKATVGYAHQHNV--AVIMSNH 167 (276)
T ss_dssp EEE-----CCCTTTTCSS---CCCHHHHHHHHHH----HHHHSCCSEEEEETTSCHHHHHHHHHHHHHTTC--EEEEEEE
T ss_pred EEE-----ECCHHHCCCC---CCCHHHHHHHHHH----HHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCC--EEEEEEC
T ss_conf 999-----7987879998---8999999999999----997299866830100537899999988533785--7999846
Q ss_pred HHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-CCCEEEE-CCCHH------HHHHHHHHHHH-
Q ss_conf 664354301016753102446777744315721147889888876640-8987995-53114------58999999962-
Q gi|255764463|r 205 AKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQE-SADMLLV-KPGLP------YLDVCFRIKEK- 275 (337)
Q Consensus 205 aKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~E-GAD~lMV-KPa~~------yLDii~~~k~~- 275 (337)
.| +..-..+-+.+.....++ |||++=+ -++-. -+.....++..
T Consensus 168 -------------------~f---------~~tp~~~~l~~~~~~~~~~gadivKia~~a~~~~D~~~l~~~~~~~~~~~ 219 (276)
T 3lb0_A 168 -------------------DF---------HKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERY 219 (276)
T ss_dssp -------------------ES---------SCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHT
T ss_pred -------------------CC---------CCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHC
T ss_conf -------------------89---------99989999999999998607998999970598678999999999999717
Q ss_pred CCCCEEEEEC
Q ss_conf 4998999934
Q gi|255764463|r 276 FGLPTFAYQV 285 (337)
Q Consensus 276 ~~~P~~aYqV 285 (337)
.+.|+.+|.-
T Consensus 220 ~~~p~i~~~M 229 (276)
T 3lb0_A 220 ADRPIITMSM 229 (276)
T ss_dssp CSSCCEEEEC
T ss_pred CCCCEEEEEC
T ss_conf 8998899977
No 112
>>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.48A {Mesorhizobium loti MAFF303099} (A:125-345)
Probab=57.18 E-value=15 Score=17.78 Aligned_cols=166 Identities=17% Similarity=0.131 Sum_probs=95.2
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCC
Q ss_conf 86328899999999999988893676330256334554454215765379999999997301-44798613327100114
Q gi|255764463|r 61 DVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHG 139 (337)
Q Consensus 61 Gv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hG 139 (337)
+.+-.+.+.+.++++.+.+.|.+.|-|-.+.++-.+| -+.|+++++.+| ++-|+.|.-
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~G~~~iKikvG~~~~~~d-------------~e~i~air~~~g~~~~l~vD~n-------- 74 (221)
T 2oz8_A 16 LDFHLDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRD-------------LRRLELLKTCVPAGSKVMIDPN-------- 74 (221)
T ss_dssp CBTTCCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHH-------------HHHHHHHHTTSCTTCEEEEECT--------
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC-------------HHHHHHHHHHHHHCCEEEECCC--------
T ss_conf 4556789999999998642142111223333663200-------------2467788988501315995157--------
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE---CC--CCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCC
Q ss_conf 31001365446289999999999999962897352---46--67677999999999877885773003366643543010
Q gi|255764463|r 140 HDGILCDGEIVNDETIELISHAAVIQADAGADIIA---PS--EMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGP 214 (337)
Q Consensus 140 HcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA---PS--dMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgP 214 (337)
++. |.+.-.+.+-.+.+.|.+.+. |- +..++ ...+|+. ..++|..-
T Consensus 75 -~~~----------~~~~a~~~~~~l~~~~~~~~~~e~p~~~~d~~~-~~~l~~~------~~~pia~~----------- 125 (221)
T 2oz8_A 75 -EAW----------TSKEALTKLVAIREAGHDLLWVEDPILRHDHDG-LRTLRHA------VTWTQINS----------- 125 (221)
T ss_dssp -TCB----------CHHHHHHHHHHHHHTTCCCSEEESCBCTTCHHH-HHHHHHH------CCSSEEEE-----------
T ss_pred -CCC----------CHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHH-HHHHHHH------CCCCCCCC-----------
T ss_conf -552----------125578999875304777247315642235678-8988762------14530023-----------
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Q ss_conf 16753102446777744315721147889888876640898799553114589999999624998999934618999999
Q gi|255764463|r 215 YRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKA 294 (337)
Q Consensus 215 FRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~ 294 (337)
-.. .+..+. ++ .-...+.|++|+|++..=-==|....+.+++|+..-.++- -+++..
T Consensus 126 --------------e~~-----~~~~~~-~~--~~~~~~~d~v~~~~g~~g~~~i~~~a~~~gi~~~~~~~~~-~a~lh~ 182 (221)
T 2oz8_A 126 --------------GEY-----LDLQGK-RL--LLEAHAADILNVHGQVTDVMRIGWLAAELGIPISIGNTFL-EAGVHM 182 (221)
T ss_dssp --------------CTT-----CCHHHH-HH--HHHTTCCSEEEECSCHHHHHHHHHHHHHHTCCEEECCCGG-GTTHHH
T ss_pred --------------CHH-----HHHHHH-HH--HHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHH
T ss_conf --------------111-----103667-77--8870364020133035689899999998398967470899-999999
Q ss_pred HHHCC
Q ss_conf 99888
Q gi|255764463|r 295 ASLQG 299 (337)
Q Consensus 295 a~~~g 299 (337)
++...
T Consensus 183 ~a~~~ 187 (221)
T 2oz8_A 183 AVALP 187 (221)
T ss_dssp HHHST
T ss_pred HHHCC
T ss_conf 99788
No 113
>>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* (A:256-392,A:430-632)
Probab=57.11 E-value=15 Score=17.77 Aligned_cols=136 Identities=15% Similarity=0.152 Sum_probs=79.6
Q ss_pred HCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC--------------CCC
Q ss_conf 733116667589881104888786328899999999999988893676330256334554454--------------215
Q gi|255764463|r 39 DLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGS--------------HII 104 (337)
Q Consensus 39 dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~Gs--------------eA~ 104 (337)
--||=+|+.. -....+-..++..+..+...+.+.+..+.++|+++|-|-|+.+.-..+..|. +.|
T Consensus 13 ~~iy~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~lG~~~i~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~gy 91 (340)
T 3faw_A 13 AVIYEAHVRD-FTSDQSLDGKLKNQLGTFAAFSEKLDYLQKLGVTHIQLLPVLSYFYVNEMDKSRSTAYTSSDNNYNWGY 91 (340)
T ss_dssp CEEEEECTTG-GGCCGGGTTTCSSCTTSHHHHGGGHHHHHHHTCSEEEESCCBCBSSCBTTCCCCCCSCCSSSCSCCCSC
T ss_pred CEEEEECCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 4899984661-367988887553466279999876689997699889969864367646322235554556788766675
Q ss_pred CCCC-----------------HHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 7653-----------------79999999997301-44798613327100114310013654462899999999999999
Q gi|255764463|r 105 DPDN-----------------LINEGICAIKKNIP-NIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQA 166 (337)
Q Consensus 105 n~dg-----------------lv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A 166 (337)
.+.+ -...-.+.|++.-. .|.||.|+.+ .|.+..+.+.+...-..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~lv~~~h~~Gi~vi~D~V~-----------------~np~V~~~i~~~~~~Wl 154 (340)
T 3faw_A 92 DPQSYFALSGMYSEKPKDPSARIAELKQLIHDIHKRGMGVILDVVY-----------------THAMSRRVLVDSIKYLT 154 (340)
T ss_dssp SBSCSSSBCSTTCSCTTSTTHHHHHHHHHHHHHHHTTCEEEEEECT-----------------TSHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEE-----------------CCHHHHHHHHHHHHHHH
T ss_conf 6434512364425444675468999999887641257746873443-----------------53466677765555443
Q ss_pred HC-CCCEE---ECCCCCCCHHHHHHHHHHH
Q ss_conf 62-89735---2466767799999999987
Q gi|255764463|r 167 DA-GADII---APSEMMDGRVQEIRKKLDS 192 (337)
Q Consensus 167 ~A-GaDiv---APSdMMDGrV~aIR~~Ld~ 192 (337)
+- |+|-. +-.-|...-....+..++.
T Consensus 155 ~~~GVDGFRlDav~~l~~~~~~~~~~~~~~ 184 (340)
T 3faw_A 155 SEFKVDGFRFDMMGDHDAAAIELAYKEAKA 184 (340)
T ss_dssp HHHCCCEEEETTGGGSBHHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 223603110342234670133344665300
No 114
>>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} (A:)
Probab=57.06 E-value=2.6 Score=22.85 Aligned_cols=74 Identities=15% Similarity=0.121 Sum_probs=49.8
Q ss_pred HHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
Q ss_conf 88999863477888773311666758988110488878632889999999999998889367633025633455
Q gi|255764463|r 24 NWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRN 97 (337)
Q Consensus 24 ~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd 97 (337)
+.+|+++.++.|....+--+.|...+......-..=|.+.+..++.+.+.++-+..+|.+.+.++++.+...++
T Consensus 72 ~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~LG~~~~~~~~g~~~~~~~ 145 (393)
T 1xim_A 72 AGFKKALDETGLIVPMVTTNLFTHPVFKDGGFTSNDRSVRRYAIRKVLRQMDLGAELGAKTLVLWGGREGAEYD 145 (393)
T ss_dssp HHHHHHHHHHTCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTSEESSG
T ss_pred HHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC
T ss_conf 99999998649801043044321255514887893999999999999999999999589816970787766687
No 115
>>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A* (A:117-261)
Probab=56.66 E-value=15 Score=17.72 Aligned_cols=66 Identities=18% Similarity=0.109 Sum_probs=35.1
Q ss_pred CCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHH--HHHHHHHH-CCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 721147889888876640898799553114589--99999962-499899993461899999999888978899999999
Q gi|255764463|r 235 DPANVQEAIREASIDIQESADMLLVKPGLPYLD--VCFRIKEK-FGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESL 311 (337)
Q Consensus 235 d~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLD--ii~~~k~~-~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l 311 (337)
.+++..|+. .-.++|||++.+=|.-|--- .+..++.. ..+|+.|-. -++. |.+
T Consensus 72 s~~t~~e~~----~a~~~gaD~i~l~~~~~~~~k~~~~~~~~~~~~ipi~a~G---------------GIt~-----~~i 127 (145)
T 2b7n_A 72 ECESFEEAK----NAMNAGADIVMCDNLSVLETKEIAAYRDAHYPFVLLEASG---------------NISL-----ESI 127 (145)
T ss_dssp EESSHHHHH----HHHHHTCSEEEEETCCHHHHHHHHHHHHHHCTTCEEEEES---------------SCCT-----TTH
T ss_pred EECCHHHHH----HHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEC---------------CCCH-----HHH
T ss_conf 976899999----9984388688127888778999999983658867999989---------------9999-----999
Q ss_pred HHHHHHCCCEEEE
Q ss_conf 9997726999982
Q gi|255764463|r 312 LAFKRAGCDGIFT 324 (337)
Q Consensus 312 ~~~kRAGAd~Iit 324 (337)
-.+..+|||.|..
T Consensus 128 ~~~~~aGa~~i~v 140 (145)
T 2b7n_A 128 NAYAKSGVDAISV 140 (145)
T ss_dssp HHHHTTTCSEEEC
T ss_pred HHHHHCCCCEEEC
T ss_conf 9999769999983
No 116
>>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} (A:)
Probab=56.34 E-value=15 Score=17.69 Aligned_cols=133 Identities=11% Similarity=-0.019 Sum_probs=71.7
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE-EECCCCCHHHCCCC
Q ss_conf 63288999999999999888936763302563345544542157653799999999973014479-86133271001143
Q gi|255764463|r 62 VMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGI-ITDVALDPFTIHGH 140 (337)
Q Consensus 62 v~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~v-i~DVcLc~YT~hGH 140 (337)
--+...+.+.+.++.+.+.|+..+++++.+.+-. .++ ..=-.+-++...+....++. +..
T Consensus 14 dg~iD~~~~~~~~~~l~~~Gv~gi~v~GstGE~~-------~Ls-~~Er~~l~~~~~~~~~~~i~~v~~----------- 74 (293)
T 1w3i_A 14 DNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGP-------SLS-PEEKLENLKAVYDVTNKIIFQVGG----------- 74 (293)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGG-------GSC-HHHHHHHHHHHHTTCSCEEEECCC-----------
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECEECHHHH-------HCC-HHHHHHHHHHHHHHHHHHHCCCCC-----------
T ss_conf 9497999999999999986999899773005355-------588-999999999865310223101100-----------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE--E-CC-C---CCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHC
Q ss_conf 100136544628999999999999996289735--2-46-6---767799999999987788577300336664354301
Q gi|255764463|r 141 DGILCDGEIVNDETIELISHAAVIQADAGADII--A-PS-E---MMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYG 213 (337)
Q Consensus 141 cGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv--A-PS-d---MMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYg 213 (337)
.|.+.-.++|-...++|+|-+ . |. - -.++-+...|...+. .+.+|+=|-.=..+..-.
T Consensus 75 ------------~s~~~~i~~a~~a~~~Gad~~l~~~P~~~~~~~~~~i~~~~~~i~~a---~~~pi~iYn~P~~~~~~~ 139 (293)
T 1w3i_A 75 ------------LNLDDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEV---SPHPVYLYNYPTATGKDI 139 (293)
T ss_dssp ------------SCHHHHHHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHH---CSSCEEEEECHHHHSCCC
T ss_pred ------------CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHC---CCHHHEEECCCCCCCCCC
T ss_conf ------------00134665435555311324345676111001088999999998862---130220120455532222
Q ss_pred CHHHHHHCCCCCCCCC
Q ss_conf 0167531024467777
Q gi|255764463|r 214 PYRDAISTRDLLKGDK 229 (337)
Q Consensus 214 PFRdA~~S~p~~~gdr 229 (337)
.++..+.- |++.|-|
T Consensus 140 ~~~~l~~~-pnivgiK 154 (293)
T 1w3i_A 140 DAKVAKEI-GCFTGVK 154 (293)
T ss_dssp CHHHHHHH-CCEEEEE
T ss_pred CHHHHHCC-CCCCCCC
T ss_conf 12555315-5321222
No 117
>>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, structural genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A (A:)
Probab=56.34 E-value=15 Score=17.69 Aligned_cols=84 Identities=20% Similarity=0.272 Sum_probs=62.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 31572114788988887664089879955311458999999962499899993461899999999888978899999999
Q gi|255764463|r 232 YYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESL 311 (337)
Q Consensus 232 YQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l 311 (337)
+..+................-+++.+.+..-+..-.++..+++ .++++.+|-|- .+ +.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~v~~wtvn----------------~~----~~~ 255 (287)
T 2oog_A 197 KLVDKGELQQFNDQRLKEIRSYAIGLGPDYTDLTEQNTHHLKD-LGFIVHPYTVN----------------EK----ADM 255 (287)
T ss_dssp EEECTTTGGGCCHHHHHHHHTTCSEEEEBGGGCCHHHHHHHHH-TTCEECCBCCC----------------SH----HHH
T ss_pred EEECCCCCCCCCHHHHHHHHHCCEECCCCHHHCCHHHHHHHHH-CCCEEEEEECC----------------CH----HHH
T ss_conf 9842553220105668887522023045330189999999998-79999999089----------------99----999
Q ss_pred HHHHHHCCCEEEECHHHHHHHHHHC
Q ss_conf 9997726999982018999999850
Q gi|255764463|r 312 LAFKRAGCDGIFTYFAMEAARILTH 336 (337)
Q Consensus 312 ~~~kRAGAd~IitY~A~~~a~~L~~ 336 (337)
.-+.+.|+|.|+|=+...+.++|++
T Consensus 256 ~~~~~~gvdgi~TD~p~~~~~~l~~ 280 (287)
T 2oog_A 256 LRLNKYGVDGVFTNFADKYKEVIKE 280 (287)
T ss_dssp HHHHHHTCSEEEESCHHHHHHHHHC
T ss_pred HHHHHCCCCEEEECCHHHHHHHHHC
T ss_conf 9998669999997739999999971
No 118
>>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino- acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; 1.45A {Staphylococcus aureus} PDB: 3di1_A 3di0_A (A:1-229)
Probab=56.23 E-value=15 Score=17.68 Aligned_cols=182 Identities=10% Similarity=0.160 Sum_probs=92.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCCC
Q ss_conf 28899999999999988893676330256334554454215765379999999997301-44798613327100114310
Q gi|255764463|r 64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHDG 142 (337)
Q Consensus 64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHcG 142 (337)
+...+.+.+.++.+.+.|+..+.+.+...+-.. + ...=-.+.++...+..+ ++.|+.-|.
T Consensus 19 ~iD~~~l~~~i~~~~~~Gv~gl~~~G~tGE~~~-------L-t~~Er~~~~~~~~~~~~~~~~ii~gv~----------- 79 (229)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPT-------L-TTDEKELILKTVIDLVDKRVPVIAGTG----------- 79 (229)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGG-------S-CHHHHHHHHHHHHHHHTTSSCEEEECC-----------
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCC-------C-CHHHHHHHHHHHHHHHCCCCCEEECCC-----------
T ss_conf 789999999999999769999997805644002-------7-899999997556775024475011121-----------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE--CCCCC----CCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHH
Q ss_conf 01365446289999999999999962897352--46676----7799999999987788577300336664354301016
Q gi|255764463|r 143 ILCDGEIVNDETIELISHAAVIQADAGADIIA--PSEMM----DGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYR 216 (337)
Q Consensus 143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA--PSdMM----DGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFR 216 (337)
+.+.+...+.+-...++|+|.|. |-..- ++.+..-|+..+. .+++|+=|
T Consensus 80 ---------~~s~~~~i~~a~~a~~~G~d~i~v~pP~~~~~~~~~i~~~~~~i~~a---~~~pi~ly------------- 134 (229)
T 3daq_A 80 ---------TNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADA---VKLPVVLY------------- 134 (229)
T ss_dssp ---------CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH---HCSCEEEE-------------
T ss_pred ---------CHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC---CCCCEEEE-------------
T ss_conf ---------11378888999999962998288620215579999999999999742---38988999-------------
Q ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHH
Q ss_conf 753102446777744315721147889888876640898799553114589999999624998-9999346189999999
Q gi|255764463|r 217 DAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLP-TFAYQVSGEYAMIKAA 295 (337)
Q Consensus 217 dA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P-~~aYqVSGEYami~~a 295 (337)
+.+......--.+...-..+=--++.+|=+-+-++-+.++.+...-| +..|--+++
T Consensus 135 ----------------n~P~~~g~~~~~~~~~~La~~~~ivgiK~~~~d~~~~~~l~~~~~~~~~~~~~G~d~------- 191 (229)
T 3daq_A 135 ----------------NVPSRTNMTIEPETVEILSQHPYIVALKDATNDFEYLEEVKKRIDTNSFALYSGNDD------- 191 (229)
T ss_dssp ----------------ECHHHHSCCCCHHHHHHHHTSTTEEEEEECCCCHHHHHHHHTTSCTTTSEEEESCGG-------
T ss_pred ----------------ECCCCCCCCCCHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCEEEECCCHH-------
T ss_conf ----------------635556851288886554047630000235537899999765414764088158657-------
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHCCCEEEECH
Q ss_conf 9888978899999999999772699998201
Q gi|255764463|r 296 SLQGWINKNDAMMESLLAFKRAGCDGIFTYF 326 (337)
Q Consensus 296 ~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~ 326 (337)
.+....++||+..++=.
T Consensus 192 --------------~~~~~~~~G~~G~i~~~ 208 (229)
T 3daq_A 192 --------------NVVEYYQRGGQGVISVI 208 (229)
T ss_dssp --------------GHHHHHHTTCCEEEESG
T ss_pred --------------HHHHHHHCCCCEEECCH
T ss_conf --------------67899835996124322
No 119
>>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer, alpha-beta barrel; 2.50A {Thermoanaerobacter thermosulfurogenes} (A:)
Probab=56.06 E-value=4.8 Score=21.06 Aligned_cols=102 Identities=8% Similarity=0.002 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCC
Q ss_conf 99999999998889367633025633455445421576537999999999730144798613327100114310013654
Q gi|255764463|r 69 VAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGE 148 (337)
Q Consensus 69 ~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~ 148 (337)
.+...++.+.++|..+|-||..-+ . ..+..-.+...+....++.+|+...+.++-....-+.+..|+++....-..
T Consensus 81 ~~~~~l~~~~~~G~~~iEl~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~Gl~i~~~~~~~~~~~~~~~~~~~~ 156 (438)
T 1a0c_A 81 RVEAAFEFFDKINAPYFCFHDRDI-A---PEGDTLRETNKNLDTIVAMIKDYLKTSKTKVLWGTANLFSNPRFVHGASTS 156 (438)
T ss_dssp HHHHHHHHHHHHTCSEEEEEHHHH-S---CCCSSHHHHHHHHHHHHHHHHHHHTTCSCEEEEEECCCSSSGGGTTCSTTC
T ss_pred HHHHHHHHHHHHCCCEEEECCCCC-C---CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEECCCEECCCCCC
T ss_conf 999999999871884576034334-8---887747888999999999999988742970001126623211000476669
Q ss_pred C---CHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 4---6289999999999999962897352
Q gi|255764463|r 149 I---VNDETIELISHAAVIQADAGADIIA 174 (337)
Q Consensus 149 I---dND~Tl~~L~k~Al~~A~AGaDivA 174 (337)
. .-+..++.+.+..-.-++-|++.|-
T Consensus 157 ~d~~~r~~~~~~~~~~i~~a~~lG~~~i~ 185 (438)
T 1a0c_A 157 CNADVFAYSAAQVKKALEITKELGGENYV 185 (438)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 69899999999999999999982998899
No 120
>>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} (A:)
Probab=55.78 E-value=16 Score=17.63 Aligned_cols=112 Identities=9% Similarity=0.056 Sum_probs=53.1
Q ss_pred CCCHHHHHHHHHHHHHC-CCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEECCCCCHHHCCCCC
Q ss_conf 28899999999999988-89367633025633455445421576537999999999730-14479861332710011431
Q gi|255764463|r 64 RMSIDVAVEKIKQVADL-GIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI-PNIGIITDVALDPFTIHGHD 141 (337)
Q Consensus 64 R~Sid~L~~eie~~~~l-GI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f-pdl~vi~DVcLc~YT~hGHc 141 (337)
....+.+.+.++.+++. |+.++.+++...+-.. +. ..=-.+.++...+.. +.+-||.-|.-+
T Consensus 20 ~iD~~~~~~~i~~li~~~Gv~gi~~~G~tGE~~~-------Ls-~eEr~~l~~~~v~~~~~~~pvi~gv~~~-------- 83 (293)
T 1f6k_A 20 TINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFM-------LS-TEEKKEIFRIAKDEAKDQIALIAQVGSV-------- 83 (293)
T ss_dssp CBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGG-------SC-HHHHHHHHHHHHHHHTTSSEEEEECCCS--------
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEECEECCCHHH-------CC-HHHHHHHHHHHHHHHCCCCEEEEECCCC--------
T ss_conf 9299999999999998289998997832766434-------79-9999999999999838987399966878--------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE--ECCCCC----CCHHHHHHHHHHHCCCCCCCEECHHHH
Q ss_conf 00136544628999999999999996289735--246676----779999999998778857730033666
Q gi|255764463|r 142 GILCDGEIVNDETIELISHAAVIQADAGADII--APSEMM----DGRVQEIRKKLDSHGHINVGIMPYVAK 206 (337)
Q Consensus 142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv--APSdMM----DGrV~aIR~~Ld~~g~~~~~ImsYsaK 206 (337)
+.+.-.+.+--..++|+|-| .|-..- +|.+...+...+. .+.+|+=|-.-
T Consensus 84 ------------~~~~~i~~a~~a~~~Ga~~v~i~~P~~~~~~~~~i~~~~~~i~~~---~~~pi~iYn~P 139 (293)
T 1f6k_A 84 ------------NLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAE---TGSNMIVYSIP 139 (293)
T ss_dssp ------------CHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH---HCCCEEEEECH
T ss_pred ------------CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH---CCCCEEEEECC
T ss_conf ------------899999999999965999999788878898989999999999972---18998999683
No 121
>>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941} (A:114-382)
Probab=55.34 E-value=16 Score=17.58 Aligned_cols=90 Identities=10% Similarity=0.082 Sum_probs=64.1
Q ss_pred CCEEEECCCCCEEECCC---CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCC---CCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 11666758988110488---87863288999999999999888936763302563---3455445421576537999999
Q gi|255764463|r 42 LPIFLTSGEKTVESINS---MPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPM---DLRNNTGSHIIDPDNLINEGIC 115 (337)
Q Consensus 42 ~PiFV~eg~~~k~~I~S---MPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~---~~Kd~~GseA~n~dglv~rAIr 115 (337)
+|+.--=|-..++.++. -....--+.+.+.+.++.+.+.|...|-|-.+.++ ..+++.|..-.|.--++...++
T Consensus 9 ~Pv~~llgg~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iki~~g~~~~~~~r~~~~g~~~e~~~~~~~e~~~ 88 (269)
T 2qq6_A 9 VRLYADCNAGTVDAAAHHIEGGLFEEGSNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAXVARVA 88 (269)
T ss_dssp EEEEEECCCSEECTTCCEEECCTTCSTHHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 66777427787566655421044445899999999999875125879981377677543344467788466899999999
Q ss_pred HHHHHHC-CCEEEECCC
Q ss_conf 9997301-447986133
Q gi|255764463|r 116 AIKKNIP-NIGIITDVA 131 (337)
Q Consensus 116 ~IK~~fp-dl~vi~DVc 131 (337)
++++.++ ++.++.|+-
T Consensus 89 avr~~~g~~~~~~vd~~ 105 (269)
T 2qq6_A 89 AVREAVGPEVEVAIDXH 105 (269)
T ss_dssp HHHHHHCSSSEEEEECT
T ss_pred HHHHHCCCCEEEEECCC
T ss_conf 99875099848851355
No 122
>>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis} (A:)
Probab=55.16 E-value=16 Score=17.56 Aligned_cols=94 Identities=17% Similarity=0.101 Sum_probs=65.1
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEEC---CCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC---HHHHHH
Q ss_conf 2114788988887664089879955---3114589999999624-99899993461899999999888978---899999
Q gi|255764463|r 236 PANVQEAIREASIDIQESADMLLVK---PGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN---KNDAMM 308 (337)
Q Consensus 236 ~~n~~eA~~e~~~D~~EGAD~lMVK---Pa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d---~~~~~~ 308 (337)
..|..||+..+. ++--|++.+- |++.-+++++.+|+.+ +.|+.++-.+++-..+..+-+.|..+ .+.-.-
T Consensus 47 a~~~~eal~~~~---~~~~DivilD~~lp~~dG~~~~~~ir~~~~~~~vivlt~~~~~~~~~~a~~~Ga~~yl~Kp~~~~ 123 (152)
T 3eul_A 47 ADDGAAALELIK---AHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRT 123 (152)
T ss_dssp ESSHHHHHHHHH---HHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTCCHH
T ss_pred ECCHHHHHHHHH---HCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCHH
T ss_conf 899999999998---37999999808999975899999999749998399996769999999999869988997989999
Q ss_pred HHHHHHHHHCCCEEEECHHHHHHHHH
Q ss_conf 99999977269999820189999998
Q gi|255764463|r 309 ESLLAFKRAGCDGIFTYFAMEAARIL 334 (337)
Q Consensus 309 E~l~~~kRAGAd~IitY~A~~~a~~L 334 (337)
|-+.+++++... -.|+.+++++-|
T Consensus 124 ~L~~ai~~~~~g--~~~~~~~~~~~l 147 (152)
T 3eul_A 124 EIVKAVLDCAKG--RDVVAPSLVGGL 147 (152)
T ss_dssp HHHHHHHHHHHC--C-----------
T ss_pred HHHHHHHHHHCC--CCCCCHHHHHHH
T ss_conf 999999999879--997899999999
No 123
>>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding protein; 1.95A {Thermus thermophilus HB8} (A:122-346)
Probab=55.10 E-value=16 Score=17.56 Aligned_cols=136 Identities=11% Similarity=0.066 Sum_probs=75.2
Q ss_pred CEEECCCCCC-CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 8110488878-632889999999999998889367633025633455445421576537999999999730144798613
Q gi|255764463|r 52 TVESINSMPD-VMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDV 130 (337)
Q Consensus 52 ~k~~I~SMPG-v~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DV 130 (337)
.++.|+..-. -+..+.+.+.+++++..+.|-++|-+=.++.. |. +.++.+++..|++.++.|.
T Consensus 5 ~r~~i~vy~s~~~~~~~e~~~~~~~~~~~~G~~~~K~kig~~~---d~-------------~~~~~~r~~g~~~~l~~D~ 68 (225)
T 2zc8_A 5 VRQAVEVGVSLGIQPSVEDTLRVVERHLEEGYRRIKLKIKPGW---DY-------------EVLKAVREAFPEATLTADA 68 (225)
T ss_dssp CCSEEEBCEEECCCSSHHHHHHHHHHHHHTTCSCEEEECBTTB---SH-------------HHHHHHHHHCTTSCEEEEC
T ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC---HH-------------HHHHHHHHHCCCCEEEEEC
T ss_conf 4561567886224786778999999976533222234458651---26-------------7768888748872467621
Q ss_pred C-------------------------CCHHHCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHH
Q ss_conf 3-------------------------271001143100136--5446289999999999999962897352466767799
Q gi|255764463|r 131 A-------------------------LDPFTIHGHDGILCD--GEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRV 183 (337)
Q Consensus 131 c-------------------------Lc~YT~hGHcGi~~~--g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV 183 (337)
- +.+..-.||--+-.. -.|--|+++..+....-.....++|+|-|--+--|=+
T Consensus 69 n~~~~~~~A~~~~~~l~~~~~~~eEp~~~~d~~~~~~l~~~~~~pia~gE~~~~~~~~~~~i~~~~~d~i~~d~~~~GGi 148 (225)
T 2zc8_A 69 NSAYSLANLAQLKRLDELRLDYIEQPLAYDDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNVKPARLGGH 148 (225)
T ss_dssp TTCCCGGGHHHHHGGGGGCCSCEECCSCTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSH
T ss_pred CCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCEEEECCCCEEEEHHHHHHHHHCCCCEEEEECCCCCCCH
T ss_conf 12212788987531101303555201000110013444331202102563343102232222035304664023323136
Q ss_pred HHHHHHHHHCCCCCCCEECH
Q ss_conf 99999998778857730033
Q gi|255764463|r 184 QEIRKKLDSHGHINVGIMPY 203 (337)
Q Consensus 184 ~aIR~~Ld~~g~~~~~ImsY 203 (337)
...++..+-.--.++.++..
T Consensus 149 t~~~~i~~~A~~~gi~v~~h 168 (225)
T 2zc8_A 149 GESLRVHALAESAGIPLWMG 168 (225)
T ss_dssp HHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEC
T ss_conf 89999999999879779868
No 124
>>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} (A:)
Probab=54.40 E-value=16 Score=17.48 Aligned_cols=119 Identities=12% Similarity=0.059 Sum_probs=71.0
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCC
Q ss_conf 86328899999999999988893676330256334554454215765379999999997301447986133271001143
Q gi|255764463|r 61 DVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGH 140 (337)
Q Consensus 61 Gv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGH 140 (337)
...+...+.+.+.++.+.+.|+..+.+++...+-. ++ ...=-.+.++...+..++.-|++-|.
T Consensus 22 ~dg~iD~~~l~~~i~~l~~~Gv~gi~~~GstGE~~-------~L-t~~Er~~l~~~~~~~~~~~~ii~gv~--------- 84 (313)
T 3dz1_A 22 DDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAP-------KL-DAAEAEAVATRFIKRAKSXQVIVGVS--------- 84 (313)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGG-------GS-CHHHHHHHHHHHHHHCTTSEEEEECC---------
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHH-------HC-CHHHHHHHHHHHHHHCCCCCEEEEEC---------
T ss_conf 88695999999999999976999899765756723-------38-99999999998652035653133102---------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE--CCCCCCCH---HHHHHHHHHHCCCCCCCEECHHHHHH
Q ss_conf 1001365446289999999999999962897352--46676779---99999999877885773003366643
Q gi|255764463|r 141 DGILCDGEIVNDETIELISHAAVIQADAGADIIA--PSEMMDGR---VQEIRKKLDSHGHINVGIMPYVAKFN 208 (337)
Q Consensus 141 cGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA--PSdMMDGr---V~aIR~~Ld~~g~~~~~ImsYsaKfa 208 (337)
..+.+.-.+.|-..+++|+|.|. |--.--.+ +..-++..++ -.++++|+=|-..-.
T Consensus 85 -----------~~st~~~ie~a~~a~~~Gad~v~v~Ppy~~~~~~~i~~~~~~i~~a-~~~~iPi~iYn~P~~ 145 (313)
T 3dz1_A 85 -----------APGFAAXRRLARLSXDAGAAGVXIAPPPSLRTDEQITTYFRQATEA-IGDDVPWVLQDYPLT 145 (313)
T ss_dssp -----------CSSHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHH-HCTTSCEEEEECHHH
T ss_pred -----------CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCCCCEEEEECCCC
T ss_conf -----------2004667777653443123333346531124433688889988874-057786467623422
No 125
>>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} (A:)
Probab=53.89 E-value=17 Score=17.43 Aligned_cols=199 Identities=12% Similarity=0.064 Sum_probs=98.3
Q ss_pred CCCCCCCCCCC---HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCC
Q ss_conf 48887863288---999999999999888936763302563345544542157653799999999973014479861332
Q gi|255764463|r 56 INSMPDVMRMS---IDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVAL 132 (337)
Q Consensus 56 I~SMPGv~R~S---id~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcL 132 (337)
+..++|...-+ ++.+.+.++++.+.|..+|++-|..-. ++.+.++..-+.+.++..+--
T Consensus 33 ~~~~~g~~~~~~~~~~~~~~~~~~a~~~~~~~v~v~~~~~~------------------~~~~~~~~~~~~v~~~i~~~~ 94 (304)
T 1to3_A 33 FAAAGAKTPVADSVLTDFKVNAAKILSPYASAVLLDQQFCY------------------RQAVEQNAVAKSCAXIVAADD 94 (304)
T ss_dssp HHHTTCCSSCCHHHHHHHHHHHHHHHGGGCSEEEECTTTTH------------------HHHHHTTCSCTTSEEEEECEE
T ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHH------------------HHHHHCCCCCCCCEEEEEECC
T ss_conf 99846888884216899999999862055855677567768------------------888740034788069998457
Q ss_pred CHHH--CCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE---E---CCCCCCCHHHHHHHHHHHCCCCCC--CEE
Q ss_conf 7100--1143-100136544628999999999999996289735---2---466767799999999987788577--300
Q gi|255764463|r 133 DPFT--IHGH-DGILCDGEIVNDETIELISHAAVIQADAGADII---A---PSEMMDGRVQEIRKKLDSHGHINV--GIM 201 (337)
Q Consensus 133 c~YT--~hGH-cGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv---A---PSdMMDGrV~aIR~~Ld~~g~~~~--~Im 201 (337)
+.+- ..|- ..-.... + ++. ..+.|||.| . |++=-+-+...+++.-+...-.+. .+.
T Consensus 95 ~~~~~~~~g~~~~~~~~~------~----ve~---a~~~GAd~v~~~~~~g~~~~~~~~~~~i~~v~~~~~~~g~~vile 161 (304)
T 1to3_A 95 FIPGNGIPVDNVVLDKKI------N----AQA---VKRDGAKALKLLVLWRSDEDAQQRLNXVKEFNELCHSNGLLSIIE 161 (304)
T ss_dssp EEEETTEEEEEEEECSSC------C----HHH---HHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCCCCCCCCCCCCCCCC------C----HHH---HHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 646888764432444556------8----999---986388889998624876569999999999999998739973898
Q ss_pred CHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHCCCCEEEEC-CCH---HH---HHHHHHHH
Q ss_conf 336664354301016753102446777744315721147889888876-64089879955-311---45---89999999
Q gi|255764463|r 202 PYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASID-IQESADMLLVK-PGL---PY---LDVCFRIK 273 (337)
Q Consensus 202 sYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D-~~EGAD~lMVK-Pa~---~y---LDii~~~k 273 (337)
.| | . ..+--|.....+.+..+..- .+=|||++=+. |+- .- ++.++++.
T Consensus 162 ~i-------------------~--~---~~~~~d~~~~~~~i~~a~~~a~e~GaD~iKt~~~~~~~~~~~~~v~~~~~~~ 217 (304)
T 1to3_A 162 PV-------------------V--R---PPRCGDKFDREQAIIDAAKELGDSGADLYKVEXPLYGKGARSDLLTASQRLN 217 (304)
T ss_dssp EE-------------------E--C---CCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHH
T ss_pred EE-------------------C--C---CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 73-------------------1--4---7776765540889999999876439769994078760456678999999987
Q ss_pred HHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 624998999934618999999998889788999999999997726999982
Q gi|255764463|r 274 EKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFT 324 (337)
Q Consensus 274 ~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~Iit 324 (337)
....+|+.+- -|--+. .-+++.+....|+||+.++.
T Consensus 218 ~~~~~pv~va--------------GG~~~~-~~~~~~i~~a~~~Ga~G~~~ 253 (304)
T 1to3_A 218 GHINXPWVIL--------------SSGVDE-KLFPRAVRVAXEAGASGFLA 253 (304)
T ss_dssp HTCCSCEEEC--------------CTTSCT-TTHHHHHHHHHHTTCCEEEE
T ss_pred HCCCCCEEEE--------------ECCCCH-HHHHHHHHHHHHCCCEEEEE
T ss_conf 2589968999--------------289898-99999999999679939985
No 126
>>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase, lysine biosynthesis; 1.50A {Hahella chejuensis} (A:1-243)
Probab=53.79 E-value=17 Score=17.42 Aligned_cols=81 Identities=9% Similarity=0.062 Sum_probs=39.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEECCCCCHHHCCCCCCC
Q ss_conf 889999999999998889367633025633455445421576537999999999730-1447986133271001143100
Q gi|255764463|r 65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI-PNIGIITDVALDPFTIHGHDGI 143 (337)
Q Consensus 65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f-pdl~vi~DVcLc~YT~hGHcGi 143 (337)
...+.+.+.++.+.+.|+..+.+++...+-.. ++ ..=-.+.++...+.. +++.||.-|.
T Consensus 18 iD~~~~~~~i~~l~~~Gv~gi~v~Gt~GE~~~-------lt-~~Er~~l~~~~~~~~~~~~~vi~gv~------------ 77 (243)
T 2rfg_A 18 VDEKALAGLVDWQIKHGAHGLVPVGTTGESPT-------LT-EEEHKRVVALVAEQAQGRVPVIAGAG------------ 77 (243)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEECSSGGGTGGG-------SC-HHHHHHHHHHHHHHHTTSSCBEEECC------------
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECEECCCHHH-------CC-HHHHHHHHHHHHHHCCCCCEEEEECC------------
T ss_conf 89999999999999779998996842656314-------89-99999999999999189840997345------------
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 136544628999999999999996289735
Q gi|255764463|r 144 LCDGEIVNDETIELISHAAVIQADAGADII 173 (337)
Q Consensus 144 ~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv 173 (337)
+.+.+...+++....++|+|.+
T Consensus 78 --------~~~~~~~i~~a~~a~~~G~d~i 99 (243)
T 2rfg_A 78 --------SNNPVEAVRYAQHAQQAGADAV 99 (243)
T ss_dssp --------CSSHHHHHHHHHHHHHHTCSEE
T ss_pred --------CCCHHHHHHHHHHHHHCCCCEE
T ss_conf --------4469999999999998499976
No 127
>>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} (A:)
Probab=53.64 E-value=17 Score=17.40 Aligned_cols=207 Identities=14% Similarity=0.062 Sum_probs=109.0
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCC
Q ss_conf 86328899999999999988893676330256334554454215765379999999997301447986133271001143
Q gi|255764463|r 61 DVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGH 140 (337)
Q Consensus 61 Gv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGH 140 (337)
|....+.+.+++.+++..+.|-.-|=+= +.+ ...+..--..-.+-.-+...|+.|++.+ ++-| ++|.|...=.
T Consensus 31 ~~~~~d~e~~~~~a~~~~~~GAdiIDig-~~s-t~p~~~~v~~~~E~~rl~~~i~~i~~~~-~~pi----SIDT~~~~v~ 103 (282)
T 1aj0_A 31 GGTHNSLIDAVKHANLMINAGATIIDVG-GES-TRPGAAEVSVEEELQRVIPVVEAIAQRF-EVWI----SVDTSKPEVI 103 (282)
T ss_dssp CCCCTHHHHHHHHHHHHHHHTCSEEEEE-SSC-CSTTCCCCCHHHHHHHHHHHHHHHHHHC-CCEE----EEECCCHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEC-CCC-CCCCCCCCCHHHHHHHHHHHHHHHHHCC-CCEE----EEEECCHHHH
T ss_conf 9867799999999999998799799877-813-4566667768899998999999986335-5237----8872473778
Q ss_pred CCCCCC-CCCCHHHHHHHHHHHHHHHHHCCCCEEEC-CC--------------CCCCHHHH---HHHHHHHCCCCC-CCE
Q ss_conf 100136-54462899999999999999628973524-66--------------76779999---999998778857-730
Q gi|255764463|r 141 DGILCD-GEIVNDETIELISHAAVIQADAGADIIAP-SE--------------MMDGRVQE---IRKKLDSHGHIN-VGI 200 (337)
Q Consensus 141 cGi~~~-g~IdND~Tl~~L~k~Al~~A~AGaDivAP-Sd--------------MMDGrV~a---IR~~Ld~~g~~~-~~I 200 (337)
---+.. -.|.||.+-..--++.-.-|+.||-+|.- ++ .++.+... +-+.|.+.|+.. -.|
T Consensus 104 ~~al~~G~diINsi~~~~~~~~~~l~~~~~~~vVlm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~Ii 183 (282)
T 1aj0_A 104 RESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLL 183 (282)
T ss_dssp HHHHHTTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHCCCEEEECHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCC
T ss_conf 99973596598423431114667776436940897405799754445885310235567899888889987498598753
Q ss_pred ECHHHHHHHHHHCCHHH-------HHHCCCCCCC-CCCCC-----CCCCCHHHHH-HHHHHHHHHCCCCEEEE---CCCH
Q ss_conf 03366643543010167-------5310244677-77443-----1572114788-98888766408987995---5311
Q gi|255764463|r 201 MPYVAKFNSSFYGPYRD-------AISTRDLLKG-DKKTY-----YLDPANVQEA-IREASIDIQESADMLLV---KPGL 263 (337)
Q Consensus 201 msYsaKfaS~fYgPFRd-------A~~S~p~~~g-dr~sY-----Qmd~~n~~eA-~~e~~~D~~EGAD~lMV---KPa~ 263 (337)
+---.-|.++.+.-++- .---.|.+.| .|+|+ -++.+.+..+ ......-..-||+++-| ++-+
T Consensus 184 iDPg~gf~~~~~~~~~~~~~~~~~~~~~~p~l~G~Snksfi~~~~~~~~~~~l~~t~~~~~~~~~~~a~iir~hdv~~~~ 263 (282)
T 1aj0_A 184 LDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVHDVKETV 263 (282)
T ss_dssp EECCTTSSCCHHHHHHHHHTGGGGGGGCSCBEECCTTCHHHHHHHTCCGGGCHHHHHHHHHHHHHTTCSEEEESCHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHH
T ss_conf 68886647770111289864466630565158851287788887479957512268999999998799999947989999
Q ss_pred HHHHHHHHHHH
Q ss_conf 45899999996
Q gi|255764463|r 264 PYLDVCFRIKE 274 (337)
Q Consensus 264 ~yLDii~~~k~ 274 (337)
.-+++...++.
T Consensus 264 ~a~~~~~~i~~ 274 (282)
T 1aj0_A 264 EAMRVVEATLS 274 (282)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999999985
No 128
>>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} (A:)
Probab=53.50 E-value=17 Score=17.39 Aligned_cols=71 Identities=24% Similarity=0.329 Sum_probs=57.3
Q ss_pred CCCCCCCCC-HHHHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 744315721-1478898888766408987995---53114589999999624-99899993461899999999888978
Q gi|255764463|r 229 KKTYYLDPA-NVQEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 229 r~sYQmd~~-n~~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
+..|+...+ |..||+.... ++--|++.+ =|++.-+++++.+|+.. .+|+...-..|+..+...+.+.|..+
T Consensus 25 ~~g~~v~~a~~~~eal~~l~---~~~~dliilD~~lp~~~G~el~~~ir~~~~~~piI~lt~~~~~~~~~~~~~~g~~~ 100 (124)
T 1srr_A 25 KEGYQTFQAANGLQALDIVT---KERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALT 100 (124)
T ss_dssp TTTCEEEEESSHHHHHHHHH---HHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCCC
T ss_pred HCCCEEEEECCHHHHHHHHH---HCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCE
T ss_conf 86998999599899999998---07998899853699998899999999609999899998889999999999879989
No 129
>>2ogi_A Hypothetical protein SAG1661; NP_688652.1, conserved hypothetical protein TIGR00488, structural genomics; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V} (A:1-159)
Probab=52.97 E-value=9.6 Score=19.05 Aligned_cols=78 Identities=8% Similarity=0.060 Sum_probs=60.7
Q ss_pred CCCCCC-CCCCHHHHHHHHH------------HHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHH
Q ss_conf 100136-5446289999999------------999999962897352466767799999999987788577300336664
Q gi|255764463|r 141 DGILCD-GEIVNDETIELIS------------HAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKF 207 (337)
Q Consensus 141 cGi~~~-g~IdND~Tl~~L~------------k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKf 207 (337)
+|++|| |++.-+..+.... .....|+..|+.++.....++..+..+-..-...|+...++++.-.+.
T Consensus 55 a~lLHDIGk~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~~~~~~~~~~~~~~~hh~~~~~~~~~~a~ii~~ 134 (159)
T 2ogi_A 55 AALLHDYAKELSDDEFLRLIDKYQPDPDLKKWGNNIWHGLVGIYKIQEDLAIKDQDILAAIAKHTVGSAQXSTLDKIVYV 134 (159)
T ss_dssp HHHHTTTTTTCCHHHHHHHHHHHCCCTGGGGSCHHHHHHHTHHHHHHHHSCCCCHHHHHHHHTTTTCCSSCCHHHHHHHH
T ss_pred HHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 99999816646879999998754897439887400100388999986325999799999999618899985469999999
Q ss_pred HHHH--HCCHHHH
Q ss_conf 3543--0101675
Q gi|255764463|r 208 NSSF--YGPYRDA 218 (337)
Q Consensus 208 aS~f--YgPFRdA 218 (337)
|-.| +.|+|..
T Consensus 135 AD~~d~~~~~~~~ 147 (159)
T 2ogi_A 135 ADYIEHNRDFPGV 147 (159)
T ss_dssp HHHHCTTCCSTTH
T ss_pred HHHHCCCCCCCCH
T ss_conf 9986237998629
No 130
>>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified} (A:111-388)
Probab=52.79 E-value=17 Score=17.31 Aligned_cols=162 Identities=11% Similarity=-0.013 Sum_probs=98.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCCC
Q ss_conf 28899999999999988893676330256334554454215765379999999997301-44798613327100114310
Q gi|255764463|r 64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHDG 142 (337)
Q Consensus 64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHcG 142 (337)
.-+.+...+.++.+.+.|-+.|-+-++-. ..+|+.+....+.-.+....++++++.++ ++.++.|.--
T Consensus 44 ~~~~~~~~~~~~~~~~~Gf~~iki~~g~~-~~~d~~~~~~~~~~~~~~~~i~avr~~~g~~~~l~iD~n~---------- 112 (278)
T 3dip_A 44 VAFMRDAGVLAESLVAEGYAAMKIWPFDD-FASITPHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHS---------- 112 (278)
T ss_dssp -----CHHHHHHHHHHTTCSEEEECTTHH-HHTTCTTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTT----------
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------
T ss_conf 77788999999999973877466324433-3545655467021999999999999975300466651200----------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCC
Q ss_conf 01365446289999999999999962897352466767799999999987788577300336664354301016753102
Q gi|255764463|r 143 ILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTR 222 (337)
Q Consensus 143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~ 222 (337)
.-|.+...+.+-.+++.|..++-..-.....+...|+.-.. ..++|..
T Consensus 113 ---------~~~~~~a~~~~~~l~~~~~~~~ee~~~~~~~~~~~~~l~~~---~~~pi~~-------------------- 160 (278)
T 3dip_A 113 ---------LWGTHAAARICNALADYGVLWVEDPIAKMDNIPAVADLRRQ---TRAPICG-------------------- 160 (278)
T ss_dssp ---------CBCHHHHHHHHHHGGGGTCSEEECCBSCTTCHHHHHHHHHH---HCCCEEE--------------------
T ss_pred ---------CCCCCHHHHHHHHCCCCCHHEECCCCCHHHCCHHHHHHHHH---CCCCCCC--------------------
T ss_conf ---------12320355666531445300013674011000899998750---3463047--------------------
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCEEEECCC----HHHHHHHHHHHHHCCCCEEE
Q ss_conf 4467777443157211478898888766408-987995531----14589999999624998999
Q gi|255764463|r 223 DLLKGDKKTYYLDPANVQEAIREASIDIQES-ADMLLVKPG----LPYLDVCFRIKEKFGLPTFA 282 (337)
Q Consensus 223 p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EG-AD~lMVKPa----~~yLDii~~~k~~~~~P~~a 282 (337)
+-..+ ++ .+...=+++| +|+++.|+. +.-.--|....+...+|+..
T Consensus 161 -----~e~~~--~~-------~~~~~~i~~~~~D~v~~~~~~~GG~~~~~ki~~~a~~~~~~~~~ 211 (278)
T 3dip_A 161 -----GENLA--GT-------RRFHEMLCADAIDFVMLDLTWCGGLSEGRKIAALAETHARPLAP 211 (278)
T ss_dssp -----CTTCC--SH-------HHHHHHHHTTCCSEEEECTTTSSCHHHHHHHHHHHHHTTCCEEE
T ss_pred -----CCCCH--HH-------HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf -----76210--26-------78877644122443346776678889999999999986991552
No 131
>>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionine MAD, decamer; HET: KPL; 1.80A {Escherichia coli} (A:)
Probab=52.48 E-value=18 Score=17.28 Aligned_cols=39 Identities=18% Similarity=0.176 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHH
Q ss_conf 289999999999999962897352466767799999999
Q gi|255764463|r 151 NDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKK 189 (337)
Q Consensus 151 ND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~ 189 (337)
.|+-++.+.+-+..|.+||||.|-+-.+-+--...+++.
T Consensus 156 tda~~~~ai~Ra~ay~eAGAd~i~~~~~~~~~~~~~~~~ 194 (264)
T 1m3u_A 156 GDEAGDQLLSDALALEAAGAQLLVLECVPVELAKRITEA 194 (264)
T ss_dssp SHHHHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHCC
T ss_conf 778999999999999875646577632757899998626
No 132
>>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} (A:1-167)
Probab=52.43 E-value=18 Score=17.28 Aligned_cols=70 Identities=16% Similarity=0.202 Sum_probs=54.5
Q ss_pred CCCCCCC-CHHHHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 4431572-11478898888766408987995---53114589999999624-99899993461899999999888978
Q gi|255764463|r 230 KTYYLDP-ANVQEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 230 ~sYQmd~-~n~~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
..|+... .|..||+..+. ++.-|++.+ =|++.-+++++.+++.. .+|+...--.++..+...|.+.|..|
T Consensus 28 ~g~~v~~a~~~~eal~~~~---~~~~dliilD~~mp~~~G~~l~~~ir~~~~~~pvI~lT~~~~~~~~~~a~~~Ga~d 102 (167)
T 3eq2_A 28 SNFKVLQALNGLQGLQIFE---SEQPDLVICDLRXPQIDGLELIRRIRQTASETPIIVLSGAGVXSDAVEALRLGAAD 102 (167)
T ss_dssp TTEEEEECSSHHHHHHHHH---HSCCSEEEECCCSSSSCTHHHHHHHHHTTCCCCEEEC---CHHHHHHHHHHHTCSE
T ss_pred CCCEEEEECCHHHHHHHHH---CCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCC
T ss_conf 8999999899999999986---18989999968889999999999998369999689999227689999999769964
No 133
>>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus HB8} PDB: 2iss_A* (A:)
Probab=52.25 E-value=18 Score=17.26 Aligned_cols=72 Identities=14% Similarity=-0.034 Sum_probs=39.8
Q ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHH------CCCCCCC
Q ss_conf 9999999998889367633025633455445421576537999999999730144798613327100------1143100
Q gi|255764463|r 70 AVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFT------IHGHDGI 143 (337)
Q Consensus 70 L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT------~hGHcGi 143 (337)
..+.++.+.+.|..+|.+-+-+..+.....+. ++. .-...|+.+|+..+=-+|--+-..+++. ..|++|+
T Consensus 30 ~~~~A~~~e~aGa~~ItVhgRt~~q~~~~~~~-~~~---~~~~~i~~ik~~v~iPVi~ng~I~~~~~~~~~~~~~~~~~~ 105 (297)
T 2zbt_A 30 TPEQAVIAEEAGAVAVMALERVPADIRAQGGV-ARM---SDPKIIKEIMAAVSIPVMAKVRIGHFVEAMILEAIGVDFID 105 (297)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCHHHHHHTTCC-CCC---CCHHHHHHHHTTCSSCEEEEEETTCHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHCCCEEEEEECCCCHHHHHCCCC-CCC---CCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCCCCC
T ss_conf 89999999871753798753577778860494-535---99899999998388136677761541988889861785234
Q ss_pred CC
Q ss_conf 13
Q gi|255764463|r 144 LC 145 (337)
Q Consensus 144 ~~ 145 (337)
+-
T Consensus 106 mi 107 (297)
T 2zbt_A 106 ES 107 (297)
T ss_dssp EE
T ss_pred CC
T ss_conf 45
No 134
>>2qw5_A Xylose isomerase-like TIM barrel; YP_324688.1, putative sugar phosphate isomerase/epimerase, structural genomics; 1.78A {Anabaena variabilis atcc 29413} (A:)
Probab=51.67 E-value=18 Score=17.20 Aligned_cols=21 Identities=19% Similarity=0.344 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHCCCCEEEEEE
Q ss_conf 999999999988893676330
Q gi|255764463|r 69 VAVEKIKQVADLGIPAIAIFP 89 (337)
Q Consensus 69 ~L~~eie~~~~lGI~av~LFp 89 (337)
.+.+.++.+.++|..+|=|++
T Consensus 32 ~~~~~~~~~~~~G~~~iEl~~ 52 (335)
T 2qw5_A 32 IVVAHIKKLQRFGYSGFEFPI 52 (335)
T ss_dssp HHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEECC
T ss_conf 499999999962969899714
No 135
>>2rdx_A Mandelate racemase/muconate lactonizing enzyme, putative; enolase, structural genomics, PSI, protein structure initiative, nysgrc; 2.00A {Roseovarius nubinhibens ism} (A:129-355)
Probab=51.62 E-value=18 Score=17.19 Aligned_cols=64 Identities=9% Similarity=-0.008 Sum_probs=47.2
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECC
Q ss_conf 1104888786328899999999999988893676330256334554454215765379999999997301-44798613
Q gi|255764463|r 53 VESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDV 130 (337)
Q Consensus 53 k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DV 130 (337)
++.|+.-=-....+.+.+.+++++..+.|.++|-+=.+.+.. +|. +.|++|++.++ ++-++.|.
T Consensus 4 r~~ip~y~~~~~~~~~~~~~~~~~~~~~G~~~~K~K~g~~~~-~d~-------------~~i~~ir~~~g~~~~l~~Da 68 (227)
T 2rdx_A 4 CDGAPMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGADWQ-SDI-------------DRIRACLPLLEPGEKAMADA 68 (227)
T ss_dssp CSSEEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCSCHH-HHH-------------HHHHHHGGGSCTTCEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCC-CHH-------------HHHHHHHHHHHCCCCCCCCC
T ss_conf 234542123454333331111001333303320233036753-014-------------67778876431011221233
No 136
>>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} (A:)
Probab=50.55 E-value=19 Score=17.08 Aligned_cols=71 Identities=15% Similarity=0.162 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECCC-------HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 1478898888766408987995531-------145899999996249989999346189999999988897889999999
Q gi|255764463|r 238 NVQEAIREASIDIQESADMLLVKPG-------LPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMES 310 (337)
Q Consensus 238 n~~eA~~e~~~D~~EGAD~lMVKPa-------~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~ 310 (337)
+....+.-+....+.|++.+.|-.- .+.+++++++++.+++|+.+= -|..+.++ .|.
T Consensus 144 ~~~~~~~~~~~~~~~g~~~i~v~~~~~~~~~~g~~~~~i~~i~~~~~~pvi~n--------------GgI~s~~d--~~~ 207 (244)
T 1vzw_A 144 DGGDLYETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCAATDRPVVAS--------------GGVSSLDD--LRA 207 (244)
T ss_dssp CCCBHHHHHHHHHHTTCCCEEEEEC-------CCCHHHHHHHHHTCSSCEEEE--------------SCCCSHHH--HHH
T ss_pred CCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEE--------------CCCCCHHH--HHH
T ss_conf 22322002356654055057875201455224661777888875289888998--------------99999999--999
Q ss_pred HHHHHHHCCCEEEE
Q ss_conf 99997726999982
Q gi|255764463|r 311 LLAFKRAGCDGIFT 324 (337)
Q Consensus 311 l~~~kRAGAd~Iit 324 (337)
+..+.++|||.++-
T Consensus 208 l~~l~~~G~dgVmi 221 (244)
T 1vzw_A 208 IAGLVPAGVEGAIV 221 (244)
T ss_dssp HHTTGGGTEEEEEE
T ss_pred HHHHHHCCCCEEEE
T ss_conf 97641479316656
No 137
>>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} (X:114-324)
Probab=49.25 E-value=20 Score=16.95 Aligned_cols=63 Identities=17% Similarity=0.257 Sum_probs=46.6
Q ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 8110488878632889999999999998889367633025633455445421576537999999999730144798613
Q gi|255764463|r 52 TVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDV 130 (337)
Q Consensus 52 ~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DV 130 (337)
.+..|+.--...--+.+.++++++++.+.|-+.|-+=.+... ....++++++.+|++.++.|.
T Consensus 5 ~r~~v~~y~s~~~~~~~~~~~~~~~~~~~G~~~~Kikvg~~~----------------~~~~i~a~re~g~~~~l~iDa 67 (211)
T 1jpd_X 5 LPETVITAQTVVIGTPDQMANSASTLWQAGAKLLKVKLDNHL----------------ISERMVAIRTAVPDATLIVDA 67 (211)
T ss_dssp CCSEEEBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSSC----------------HHHHHHHHHHHCTTSEEEEEC
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCH----------------HHHHHHHHHHHCCCHHHHCCC
T ss_conf 786540110377899999999999998579866731643103----------------788999876622251221045
No 138
>>2oqh_A Putative isomerase; PSI-II, PSI-2, NYSGXRC, enolase, TIM barrel, structural genomics, protein structure initiative; 1.98A {Streptomyces coelicolor A3} (A:131-226)
Probab=49.25 E-value=20 Score=16.95 Aligned_cols=64 Identities=11% Similarity=0.088 Sum_probs=45.2
Q ss_pred EEECCCCCCCCC--CCHHHHHHHHHHHH-HCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 110488878632--88999999999999-888936763302563345544542157653799999999973014479861
Q gi|255764463|r 53 VESINSMPDVMR--MSIDVAVEKIKQVA-DLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITD 129 (337)
Q Consensus 53 k~~I~SMPGv~R--~Sid~L~~eie~~~-~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~D 129 (337)
+.||...-|-.. -+.+...+++.+.. +.|.+.|-+-++.+.+ .| .+.++++++.+||+-++.|
T Consensus 2 r~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~Kik~g~~~~-~d-------------~~~~~aire~~~d~~l~vD 67 (96)
T 2oqh_A 2 ALITRADAPGATPADLPKAXAEHAVRVVEEGGFDAVKLKGTTDCA-GD-------------VAILRAVREALPGVNLRVD 67 (96)
T ss_dssp EEECGGGCSSCCTTTHHHHHHHHHHHHHHHHCCSEEEEECCSCHH-HH-------------HHHHHHHHHHCTTSEEEEE
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH-HH-------------HHHHHHHHHHCCCCCEEEE
T ss_conf 998423678754456688876666554303774322346775511-15-------------9999999987189857861
Q ss_pred C
Q ss_conf 3
Q gi|255764463|r 130 V 130 (337)
Q Consensus 130 V 130 (337)
.
T Consensus 68 a 68 (96)
T 2oqh_A 68 P 68 (96)
T ss_dssp C
T ss_pred C
T ss_conf 6
No 139
>>2wmm_A Chromosome partition protein MUKB; cell division, DNA condensation, nucleotide-binding, cell cycle, coiled coil, ATP-binding, DNA-binding, SMC; 2.30A {Escherichia coli} (A:28-134)
Probab=48.88 E-value=6.9 Score=20.04 Aligned_cols=23 Identities=39% Similarity=0.560 Sum_probs=17.3
Q ss_pred CCCCCEECHHHHHHHHHHCCHHHHH
Q ss_conf 8577300336664354301016753
Q gi|255764463|r 195 HINVGIMPYVAKFNSSFYGPYRDAI 219 (337)
Q Consensus 195 ~~~~~ImsYsaKfaS~fYgPFRdA~ 219 (337)
|.++.|= -|-|-|++|||-|.|.
T Consensus 21 YDDvti~--DAPYfSAlYGpaRhAI 43 (107)
T 2wmm_A 21 YDDVSLE--DAPYFSALYGPSRHAI 43 (107)
T ss_dssp GGGCCTT--THHHHHHHTGGGGGCE
T ss_pred HCCCCCC--HHHHHHHHHCCCCEEE
T ss_conf 2456720--3577998746300025
No 140
>>3igx_A Transaldolase; TAla, IDP02095, cytoplasm, pentose shunt, transferase, structural genomics; 1.85A {Francisella tularensis subsp} (A:)
Probab=48.61 E-value=20 Score=16.89 Aligned_cols=23 Identities=26% Similarity=0.300 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEC
Q ss_conf 99999999999999628973524
Q gi|255764463|r 153 ETIELISHAAVIQADAGADIIAP 175 (337)
Q Consensus 153 ~Tl~~L~k~Al~~A~AGaDivAP 175 (337)
.|+--=..||+.-|+|||++|+|
T Consensus 161 ~T~vfs~~Qa~~aa~Aga~~isp 183 (324)
T 3igx_A 161 LTLIFDKAQAKACAEAGVYLVSP 183 (324)
T ss_dssp EEEECSHHHHHHHHHTTCSEEEE
T ss_pred EEEECCHHHHHHHHHCCCCEEEE
T ss_conf 77757799999999819918986
No 141
>>3cwn_A Transaldolase B; directed evolution, cytoplasm, pentose shunt, transferase; 1.40A {Escherichia coli} PDB: 1ucw_A* 1onr_A 1i2r_A 1i2q_A 1i2o_A 1i2p_A 1i2n_A (A:)
Probab=48.55 E-value=20 Score=16.88 Aligned_cols=162 Identities=20% Similarity=0.109 Sum_probs=82.5
Q ss_pred HHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCC-------------------------------H-H---
Q ss_conf 8899986347788877331166675898811048887863288-------------------------------9-9---
Q gi|255764463|r 24 NWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMS-------------------------------I-D--- 68 (337)
Q Consensus 24 ~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~S-------------------------------i-d--- 68 (337)
..++++..++.+.-=+.+..+|+.-+. .+.|..+|-.---+ . .
T Consensus 14 ~~~~~~~~~~~~~~l~~~~~~~lDsa~--~~~i~~~~~~G~TtNP~i~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ 91 (337)
T 3cwn_A 14 LVPRGSHMTDKLTSLRQYTTVVADTGD--IAAMKLYQPQDATTNPSLILNAAQIPEYRKLIDDAVAWAKQQSNDRAQQIV 91 (337)
T ss_dssp --------CBHHHHHTTTSEEEEECSC--HHHHHHHCCSEEECCHHHHHHHHTSGGGHHHHHHHHHHHHHHCSCHHHHHH
T ss_pred CCCCCCCHHHHHHHHHCCEEEECCCCC--HHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 887997131099996168279778738--999985599986528999998736857899999999997645786899999
Q ss_pred -----HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH----HH--CCCEEEECCCCCHHHC
Q ss_conf -----999999999988893676330256334554454215765379999999997----30--1447986133271001
Q gi|255764463|r 69 -----VAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKK----NI--PNIGIITDVALDPFTI 137 (337)
Q Consensus 69 -----~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~----~f--pdl~vi~DVcLc~YT~ 137 (337)
...+.+.+..+..-.-|-+. + ++. -++|.++.+-+|-+..+- .. |+++|=. |-|.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~G~vsie-v-~p~-------~a~d~e~~v~~A~~L~~l~~~~~i~~~ni~IKI-----PaT~ 157 (337)
T 3cwn_A 92 DATDKLAVNIGLEILKLVPGRISTE-V-DAR-------LSYDTEASIAKAKRLIKLYNDAGISNDRILIKL-----ASTW 157 (337)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCEEEE-C-CGG-------GTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEE-----ECSH
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEE-E-CCC-------CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEC-----CCCH
T ss_conf 9999999998899862788865899-5-777-------555738999999999999987288876437732-----5757
Q ss_pred CCC--CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHH------------------------HHHHHHHH
Q ss_conf 143--1001365446289999999999999962897352466767799------------------------99999998
Q gi|255764463|r 138 HGH--DGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRV------------------------QEIRKKLD 191 (337)
Q Consensus 138 hGH--cGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV------------------------~aIR~~Ld 191 (337)
.|- |-.+...-|.-..|+--=..||+.-|+|||++|+|= =||+ ..|++.+.
T Consensus 158 ~Gi~A~~~L~~~GI~vn~T~vfS~~Qa~~aa~Aga~~ispf---vgRid~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 234 (337)
T 3cwn_A 158 QGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLISPY---VGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYK 234 (337)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCSEEEEB---SHHHHHHHHHHSSCCCCCGGGCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCEEECC---CCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 89999999997596125311201788999998276202010---034321332267521246446836899999999999
Q ss_pred HCCCCCCCEECHHH
Q ss_conf 77885773003366
Q gi|255764463|r 192 SHGHINVGIMPYVA 205 (337)
Q Consensus 192 ~~g~~~~~ImsYsa 205 (337)
.+|+. |.||+=|.
T Consensus 235 ~~~~~-T~vl~AS~ 247 (337)
T 3cwn_A 235 EHGYE-TVVMGASF 247 (337)
T ss_dssp HTTCC-CEEEEBCC
T ss_pred HCCCC-CCCHHHCC
T ss_conf 74977-55001013
No 142
>>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40} (A:128-363)
Probab=48.49 E-value=19 Score=17.01 Aligned_cols=65 Identities=12% Similarity=0.049 Sum_probs=42.8
Q ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEECC
Q ss_conf 8110488878632889999999999998889367633025633455445421576537999999999730-144798613
Q gi|255764463|r 52 TVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI-PNIGIITDV 130 (337)
Q Consensus 52 ~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f-pdl~vi~DV 130 (337)
.++.|+.-=-+...+.+.+.++++++.+.|.++|-+-.+.+.. .|. ..++++++.+ |++-++.|.
T Consensus 5 ~r~~i~~y~~~~~~~~e~~~~~~~~~~~~G~~~~Kik~g~~~~-~d~-------------~~v~~~r~~~g~~~~l~~Da 70 (236)
T 2ps2_A 5 TNTRLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISGEPV-TDA-------------KRITAALANQQPDEFFIVDA 70 (236)
T ss_dssp CSSCEEBEEEECSCCHHHHHHHHHHHHTTTCCEEEEECCSCHH-HHH-------------HHHHHHTTTCCTTCEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCH-HHH-------------HHHHHHHHHHCCCCEEECCC
T ss_conf 3233322223346884101467998865024433233222201-457-------------78899998745420230231
No 143
>>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP} (A:)
Probab=48.16 E-value=20 Score=16.84 Aligned_cols=92 Identities=14% Similarity=0.158 Sum_probs=65.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCCH------H
Q ss_conf 7211478898888766408987995---53114589999999624-998999934618999999998889788------9
Q gi|255764463|r 235 DPANVQEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWINK------N 304 (337)
Q Consensus 235 d~~n~~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d~------~ 304 (337)
...|..||+..+. +.--|++++ -|++.-+.+++.+|+.. ..|+..+.-.++......|-+.|..++ .
T Consensus 36 ~a~~~~eal~~~~---~~~pDlvllD~~mp~~~G~~~l~~ir~~~~~~~vIils~~~~~~~~~~a~~~Ga~~yl~Kp~~~ 112 (153)
T 3cz5_A 36 EAADAGEAYRLYR---ETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVTKSSDP 112 (153)
T ss_dssp EESSHHHHHHHHH---TTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHHHTTCSEEEETTSCT
T ss_pred ECCCHHHHHHHHH---HCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCCEEECCCCH
T ss_conf 3599999999998---4599899996336898789999999975899969999825899999999986998389689999
Q ss_pred HHHHHHHHHHHHHCCCEEEECHHHHHHHHH
Q ss_conf 999999999977269999820189999998
Q gi|255764463|r 305 DAMMESLLAFKRAGCDGIFTYFAMEAARIL 334 (337)
Q Consensus 305 ~~~~E~l~~~kRAGAd~IitY~A~~~a~~L 334 (337)
..+.+++....+-+ +|+.+++++-+
T Consensus 113 ~~L~~~i~~~~~~~-----~~~~~~~~~~l 137 (153)
T 3cz5_A 113 AELVQAIEAILAGR-----RAMSPDIAQEI 137 (153)
T ss_dssp THHHHHHHHHTTTC-----CEECHHHHHHH
T ss_pred HHHHHHHHHHHCCC-----CCCCHHHHHHH
T ss_conf 99999999998289-----77998999999
No 144
>>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8} (A:1-212,A:291-326)
Probab=47.44 E-value=21 Score=16.77 Aligned_cols=37 Identities=14% Similarity=0.244 Sum_probs=18.9
Q ss_pred HHHHHHCCCCEEEEC--------CCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 887664089879955--------3114589999999624998999
Q gi|255764463|r 246 ASIDIQESADMLLVK--------PGLPYLDVCFRIKEKFGLPTFA 282 (337)
Q Consensus 246 ~~~D~~EGAD~lMVK--------Pa~~yLDii~~~k~~~~~P~~a 282 (337)
+...++.|+|.++|. ++.+-++.++++++.+++||.+
T Consensus 137 A~~l~~aGad~i~v~g~~~~~~~~~~~~~~~l~~v~~~~~iPVia 181 (248)
T 3bo9_A 137 ARXVERAGADAVIAEGXESGGHIGEVTTFVLVNKVSRSVNIPVIA 181 (248)
T ss_dssp HHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEE
T ss_conf 998998417820024666655666666688878898754865576
No 145
>>3c3w_A Two component transcriptional regulatory protein DEVR; response regulator, two-component regulatory system, DNA- binding protein; 2.20A {Mycobacterium tuberculosis} (A:1-99,A:196-225)
Probab=47.04 E-value=21 Score=16.73 Aligned_cols=78 Identities=17% Similarity=0.247 Sum_probs=59.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEEC---CCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 2114788988887664089879955---3114589999999624-99899993461899999999888978899999999
Q gi|255764463|r 236 PANVQEAIREASIDIQESADMLLVK---PGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESL 311 (337)
Q Consensus 236 ~~n~~eA~~e~~~D~~EGAD~lMVK---Pa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l 311 (337)
..|..||+..+. ..-.|++++- |++..+++++.+|+.. ..|+...--.++...+..|-++|.-...++.. -.
T Consensus 33 a~~g~eal~~i~---~~~pDiiilDi~LP~~dGleli~~Ik~~~p~~~IIvlS~~~~~~~~~~Al~aGAs~~~~~~~-~~ 108 (129)
T 3c3w_A 33 AGSVAEAMARVP---AARPDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLILTSYTSDEAMLDAILAGASRRTQAAV-FA 108 (129)
T ss_dssp ESSHHHHHHHHH---HHCCSEEEECSEETTEEHHHHHHHHHHHCTTCEEEEGGGSSSHHHHHHHHHHTCCSSCHHHH-HH
T ss_pred ECCHHHHHHHHH---HCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHH-HH
T ss_conf 799999999998---66998799825689999631433222204564444443454679999999728879999999-99
Q ss_pred HHHHHH
Q ss_conf 999772
Q gi|255764463|r 312 LAFKRA 317 (337)
Q Consensus 312 ~~~kRA 317 (337)
+-+||.
T Consensus 109 ~~~~~~ 114 (129)
T 3c3w_A 109 TELKRS 114 (129)
T ss_dssp HHHTTT
T ss_pred HHCCCC
T ss_conf 990898
No 146
>>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} (A:1-87,A:148-337)
Probab=47.03 E-value=21 Score=16.72 Aligned_cols=115 Identities=10% Similarity=0.069 Sum_probs=72.7
Q ss_pred CCCCCHHHHHHH-HHHHHHCCCCEEEEEECCCCCCCCC-CCC-----CCCCCC-CHHHHHHHHHHHHHC-CCEEEECCCC
Q ss_conf 632889999999-9999988893676330256334554-454-----215765-379999999997301-4479861332
Q gi|255764463|r 62 VMRMSIDVAVEK-IKQVADLGIPAIAIFPNIPMDLRNN-TGS-----HIIDPD-NLINEGICAIKKNIP-NIGIITDVAL 132 (337)
Q Consensus 62 v~R~Sid~L~~e-ie~~~~lGI~av~LFp~I~~~~Kd~-~Gs-----eA~n~d-glv~rAIr~IK~~fp-dl~vi~DVcL 132 (337)
.+.+....+.++ ++.+.++|+.+|-|=|+.+...++. .|- .+.++. |=...-.+.|++.-. .|.||.|+
T Consensus 8 ~~~g~~~~~~~~~~~~~~~~g~~~i~~~p~~~~~~~~~~~gy~~~~~~~~~~~~g~~~~~~~l~~~~h~~gi~v~~D~-- 85 (277)
T 1g94_A 8 LFEWNWQDVAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIYVDT-- 85 (277)
T ss_dssp ETTCCHHHHHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEE--
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCEEEEEE--
T ss_conf 777847999999999999809988995988458999988678878787658889999999999999998899999998--
Q ss_pred CHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE---ECCCCCCCHHHHHHHHHHHC
Q ss_conf 71001143100136544628999999999999996289735---24667677999999999877
Q gi|255764463|r 133 DPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADII---APSEMMDGRVQEIRKKLDSH 193 (337)
Q Consensus 133 c~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv---APSdMMDGrV~aIR~~Ld~~ 193 (337)
.++|++..+.+.+...-.-+-|+|-. +-.-+-......+...+...
T Consensus 86 ---------------v~~Np~Vr~~l~~~~r~Wld~GVDGfR~Daa~~~~~~~~~~~~~~~~~~ 134 (277)
T 1g94_A 86 ---------------LIASNYVQNTIAAYINDLQAIGVKGFRFDASKHVAASDIQSLMAKVNGS 134 (277)
T ss_dssp ---------------ECTSHHHHHHHHHHHHHHHHHTCCEEEEETGGGSCHHHHHHHHHTSCSC
T ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHCCC
T ss_conf ---------------1599899999999999999829982521440117999999999741888
No 147
>>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics, protein structure initiative; 2.89A {Clostridium difficile 630} (A:)
Probab=46.29 E-value=22 Score=16.65 Aligned_cols=71 Identities=20% Similarity=0.170 Sum_probs=54.7
Q ss_pred CCCCCCCCCH-HHHHHHHHHHHHHCCCCEEEEC---CCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 7443157211-4788988887664089879955---311458999999962499899993461899999999888978
Q gi|255764463|r 229 KKTYYLDPAN-VQEAIREASIDIQESADMLLVK---PGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 229 r~sYQmd~~n-~~eA~~e~~~D~~EGAD~lMVK---Pa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
+..||...+. ..+|+.... ++--|++.+- |.+.-+++++.+|+....|+..+-..++......+.+.|.-|
T Consensus 26 ~~g~~v~~a~~~~~al~~l~---~~~~dliilD~~lp~~dG~el~~~ir~~~~~PiI~lt~~~~~~~~~~~l~~Ga~d 100 (136)
T 2qzj_A 26 EKGISIDLAYNCEEAIGKIF---SNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYXTYINEDQSILNALNSGGDD 100 (136)
T ss_dssp TTTCEEEEESSHHHHHHHHH---HCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCCHHHHHHHHHTTCCE
T ss_pred HCCCEEEEECCHHHHHHHHH---CCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCE
T ss_conf 87999999824889999860---6698689862133675035577675316877599991379999999999879989
No 148
>>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} (A:1-234)
Probab=45.74 E-value=22 Score=16.59 Aligned_cols=173 Identities=11% Similarity=0.103 Sum_probs=90.6
Q ss_pred HHHHHHCCCCEEEEEECCCC-CC-CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCH
Q ss_conf 99999888936763302563-34-55445421576537999999999730144798613327100114310013654462
Q gi|255764463|r 74 IKQVADLGIPAIAIFPNIPM-DL-RNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVN 151 (337)
Q Consensus 74 ie~~~~lGI~av~LFp~I~~-~~-Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdN 151 (337)
.+-+.+.|..++.+=+.... .+ ....+.- +-.-+...++.|....+...|++|.- +|+.| .+|
T Consensus 47 A~i~~~~g~~ai~~s~~~~a~~~G~~D~~~l---~~~e~~~~~~~i~~~~~~~~iiaD~~------~G~~~------~~~ 111 (234)
T 1oy0_A 47 ARIFDEAGIPVLLVGDSAANVVYGYDTTVPI---SIDELIPLVRGVVRGAPHALVVADLP------FGSYE------AGP 111 (234)
T ss_dssp HHHHHTTTCCEEEECTTHHHHTTCCSSSSSC---CGGGTHHHHHHHHHHCTTSEEEEECC------TTSST------TCH
T ss_pred HHHHHHCCCCEEEECCCHHHHHCCCCCCCCC---CHHHHHHHHHHHHCCCCCCEEEECCC------CCCCC------CCH
T ss_conf 9999975998899767448640577677767---88999999999973787653784366------53447------799
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEECCCCCCC-HHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCC
Q ss_conf 899999999999999628973524667677-9999999998778857730033666435430101675310244677774
Q gi|255764463|r 152 DETIELISHAAVIQADAGADIIAPSEMMDG-RVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKK 230 (337)
Q Consensus 152 D~Tl~~L~k~Al~~A~AGaDivAPSdMMDG-rV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~ 230 (337)
.+.+..+ .-.+.++||+.|---|-... +.+. .+.+ ..+++..+-.+-.. ++++. +-|.-
T Consensus 112 ~~~v~~~---v~~l~~aGa~gi~iED~~~~~~~~~---~~~~---~~i~~~~~~~~~~~-----~~~a~---~d~~i--- 171 (234)
T 1oy0_A 112 TAALAAA---TRFLKDGGAHAVKLEGGERVAEQIA---CLTA---AGIPVMAHIGFTPQ-----SVNTL---GGFRV--- 171 (234)
T ss_dssp HHHHHHH---HHHHHTTCCSEEEEEBSGGGHHHHH---HHHH---HTCCEEEEEECCC----------------------
T ss_pred HHHHHHH---HHHHHHHCCCEEECCCCHHHHHHHH---HHHH---CCCCEEEEECCCHH-----HHCCC---CCCCC---
T ss_conf 9999999---9999974345455467475999999---9998---79966752036735-----52336---86420---
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 4315721147889888876640898799553114589999999624998999934
Q gi|255764463|r 231 TYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQV 285 (337)
Q Consensus 231 sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqV 285 (337)
+=-.....+++..+....+=|||.+.+- ...-+++..+.+...+|+.+.--
T Consensus 172 --~aRtda~~~~i~ra~~y~eAGAd~i~i~--g~~~e~~~~~~~~~~~Pv~~~g~ 222 (234)
T 1oy0_A 172 --QGRGDAAEQTIADAIAVAEAGAFAVVME--MVPAELATQITGKLTIPTVGIGA 222 (234)
T ss_dssp -----CHHHHHHHHHHHHHHHHTCSEEEEE--SCCHHHHHHHHHHCSSCEEEESS
T ss_pred --CCHHHHHHHHHHHHHHHHHCCCEEEEEE--CCCHHHHHHHHHHCCCCEEEECC
T ss_conf --3507888899999999983888188763--57188999998617843896147
No 149
>>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} (A:1-213)
Probab=45.53 E-value=22 Score=16.57 Aligned_cols=62 Identities=11% Similarity=-0.025 Sum_probs=43.6
Q ss_pred HHHHHHHHHCCCCEEEECC------CHH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 9888876640898799553------114--58999999962499899993461899999999888978899999999999
Q gi|255764463|r 243 IREASIDIQESADMLLVKP------GLP--YLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAF 314 (337)
Q Consensus 243 ~~e~~~D~~EGAD~lMVKP------a~~--yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~ 314 (337)
..++...++.|||++.+-+ +.+ -+..+.++++..++|+.+= -|.-+..+ ....
T Consensus 139 ~~~a~~~~~~Gad~i~v~~~~~~g~~~~~~~~~~l~~~~~~~~ipvia~--------------GGI~t~~d-----~~~~ 199 (213)
T 3igs_A 139 VDDGLACQRLGADIIGTTXSGYTTPDTPEEPDLPLVKALHDAGCRVIAE--------------GRYNSPAL-----AAEA 199 (213)
T ss_dssp HHHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHTTCCEEEE--------------SCCCSHHH-----HHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEE--------------CCCCCHHH-----HHHH
T ss_conf 8999999974997436532465666667135799999872568819986--------------89899999-----9999
Q ss_pred HHHCCCEEE
Q ss_conf 772699998
Q gi|255764463|r 315 KRAGCDGIF 323 (337)
Q Consensus 315 kRAGAd~Ii 323 (337)
..+|||.+.
T Consensus 200 l~~GAd~V~ 208 (213)
T 3igs_A 200 IRYGAWAVT 208 (213)
T ss_dssp HHTTCSEEE
T ss_pred HHCCCCEEE
T ss_conf 986999999
No 150
>>3ibp_A Chromosome partition protein MUKB; structural maintenance of chromosomes, SMC, condensin, cohesin, chromosome segregation, hinge; 3.10A {Escherichia coli k-12} (A:107-215)
Probab=45.16 E-value=7.2 Score=19.90 Aligned_cols=23 Identities=39% Similarity=0.560 Sum_probs=17.2
Q ss_pred CCCCCEECHHHHHHHHHHCCHHHHH
Q ss_conf 8577300336664354301016753
Q gi|255764463|r 195 HINVGIMPYVAKFNSSFYGPYRDAI 219 (337)
Q Consensus 195 ~~~~~ImsYsaKfaS~fYgPFRdA~ 219 (337)
|.++.|= -|-|-|++|||-|.|.
T Consensus 23 YDDvtl~--DAPYfSAlYGpaRhaI 45 (109)
T 3ibp_A 23 YDDVSLE--DAPYFSALYGPSRHAI 45 (109)
T ss_dssp STTCCTT--THHHHHHHTGGGGSEE
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHH
T ss_conf 9999999--9999999999999999
No 151
>>2vef_A Dihydropteroate synthase; antibiotic resistance, folic acid, transferase, biosynthesis, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A* (A:)
Probab=44.90 E-value=23 Score=16.51 Aligned_cols=60 Identities=18% Similarity=0.207 Sum_probs=30.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC---CCCHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 288999999999999888936763302563345544542157---653799999999973014479861
Q gi|255764463|r 64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIID---PDNLINEGICAIKKNIPNIGIITD 129 (337)
Q Consensus 64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n---~dglv~rAIr~IK~~fpdl~vi~D 129 (337)
..+.+.+++.+++..+.|-.-|=+= +- +... |++--+ +-.-+.-+|+.|++.+ ++-|..|
T Consensus 29 ~~~~~~~~~~a~~~~~~GAdiIDIG-~~-st~p---~~~~v~~eeE~~rl~~~i~~i~~~~-~~piSID 91 (314)
T 2vef_A 29 FFALEQALQQARKLIAEGASMLDIG-GE-STRP---GSSYVEIEEEIQRVVPVIKAIRKES-DVLISID 91 (314)
T ss_dssp -CHHHHHHHHHHHHHHTTCSEEEEE-CC-C--------CHHHHHHHHHHHHHHHHHHHHHC-CCEEEEE
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEC-CE-ECCC---CCEECCHHHHHHHHHHHHHHHHHCC-CCCCCCC
T ss_conf 8899999999999998799799979-72-3799---8950574776666688999986447-8850415
No 152
>>1r7a_A Sucrose phosphorylase; beta-alpha-barrels, dimer, glycoside hydrolase, transferase; 1.77A {Bifidobacterium adolescentis} (A:1-86,A:166-234,A:372-435)
Probab=44.17 E-value=23 Score=16.44 Aligned_cols=146 Identities=14% Similarity=0.051 Sum_probs=97.2
Q ss_pred CCCC-CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHCCCEEEECCCCCHHH
Q ss_conf 7863-28899999999999988893676330256334554454215765--37999999999730144798613327100
Q gi|255764463|r 60 PDVM-RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPD--NLINEGICAIKKNIPNIGIITDVALDPFT 136 (337)
Q Consensus 60 PGv~-R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~d--glv~rAIr~IK~~fpdl~vi~DVcLc~YT 136 (337)
|.-+ .-....+.+.+..+.++|+++|-|-|..+.......|-...|-. ++---....+|+..-.|.||.|+-
T Consensus 11 ~~~f~~g~~~~i~~~l~~l~~lG~~~i~l~Pi~~~~~~~~~GY~~~d~~~vd~~~Gt~~d~~~l~~gi~vi~D~V----- 85 (219)
T 1r7a_A 11 ADRLGDGTIKSMTDILRTRFDGVYDGVHILPFFTPFDGADAGFDPIDHTKVDERLGSWDDVAELSKTHNIMVDAI----- 85 (219)
T ss_dssp SSSBSSSSHHHHHHHHHHHSTTTCCEEEECCCEECSSSSSTTSSCSEEEEECTTTCCHHHHHHHHTTSEEEEEEE-----
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHCHHCCCHHHHHHHHHCCEEEEEEC-----
T ss_conf 478899887899998789987796879979988898778899675343022420299999999981998999988-----
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEC--CCCC---------C-----CHHHHHHHHHHHCC------
Q ss_conf 114310013654462899999999999999628973524--6676---------7-----79999999998778------
Q gi|255764463|r 137 IHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAP--SEMM---------D-----GRVQEIRKKLDSHG------ 194 (337)
Q Consensus 137 ~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAP--SdMM---------D-----GrV~aIR~~Ld~~g------ 194 (337)
+.|.+..+.+.++..-..+-|+|..=- -.++ + -=++.+|+.+++.+
T Consensus 86 ------------~~NP~V~~~l~~i~~~Wl~~GVDGFRlDav~~i~k~~~~~~~~~~~~~~~~~~~r~~v~~~~~~~~~~ 153 (219)
T 1r7a_A 86 ------------VDSDKGWEYLMSIFDQMAASHVSYIRLDAVGYGAKEAGTSCFMTPKTFKLISRLREEGVKRGLEILIE 153 (219)
T ss_dssp ------------CTSHHHHHHHHHHHHHHHHTTCCEEEEETGGGSCCCTTSCSSSCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred ------------CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf ------------77878887788999889871986333444344445666424576203788888999986327533233
Q ss_pred -CCCCCEECHHHHHHHHHHCCHHHHHHCC
Q ss_conf -8577300336664354301016753102
Q gi|255764463|r 195 -HINVGIMPYVAKFNSSFYGPYRDAISTR 222 (337)
Q Consensus 195 -~~~~~ImsYsaKfaS~fYgPFRdA~~S~ 222 (337)
...++=..|..+|+..++=.++...+..
T Consensus 154 ~E~~~p~~~~~~~f~~~~d~~~~~~~~~~ 182 (219)
T 1r7a_A 154 VHPGVPQVYYVGALAGKNDMELLRKTNNG 182 (219)
T ss_dssp CCSSEEEEEHHHHTTCCCCHHHHHHHCBG
T ss_pred CCCCCCEEECCCCCCCCCCCCHHHCCCCC
T ss_conf 34988466424012788884201026998
No 153
>>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D domain swapping; 2.03A {Mycobacterium tuberculosis H37RV} (A:1-101)
Probab=43.59 E-value=24 Score=16.38 Aligned_cols=72 Identities=18% Similarity=0.257 Sum_probs=54.3
Q ss_pred CCCCCCCCC-HHHHHHHHHHHHHHCCCCEEEEC---CCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCH
Q ss_conf 744315721-14788988887664089879955---3114589999999624998999934618999999998889788
Q gi|255764463|r 229 KKTYYLDPA-NVQEAIREASIDIQESADMLLVK---PGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINK 303 (337)
Q Consensus 229 r~sYQmd~~-n~~eA~~e~~~D~~EGAD~lMVK---Pa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~ 303 (337)
+..||...+ |..||+.... +.--|.+.+- |.+.=+++++.+|+...+|+...-..++-.....|-+.|.-|+
T Consensus 26 ~~g~~v~~a~~~~~al~~~~---~~~~dliilD~~lP~~dG~~l~~~ir~~~~~pii~lt~~~~~~~~~~a~~~GadDy 101 (101)
T 2oqr_A 26 KEGFEATVVTDGPAALAEFD---RAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDY 101 (101)
T ss_dssp HTTCEEEEECSHHHHHHHHH---HHCCSEEEEESSCSSSCHHHHHHHHHHHCSCSEEEEECCHHHHHHHHHHHHCCSCC
T ss_pred HCCCEEEEECCHHHHHHHHH---HCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCEE
T ss_conf 87999999899999999998---53664155301322103566655521367558999982899899999997689999
No 154
>>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str} (A:)
Probab=43.56 E-value=24 Score=16.37 Aligned_cols=107 Identities=19% Similarity=0.103 Sum_probs=54.5
Q ss_pred CCCCCCHHHHHHHHHHHH------HCCCEEEECCCCCHHHCCCCCCC--CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 157653799999999973------01447986133271001143100--1365446289999999999999962897352
Q gi|255764463|r 103 IIDPDNLINEGICAIKKN------IPNIGIITDVALDPFTIHGHDGI--LCDGEIVNDETIELISHAAVIQADAGADIIA 174 (337)
Q Consensus 103 A~n~dglv~rAIr~IK~~------fpdl~vi~DVcLc~YT~hGHcGi--~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA 174 (337)
+++.++.+.+|-+..+-- -|+++|=. |-|..|-.=+ +...-|.--.|+--=..||..-|+|||++|+
T Consensus 106 a~d~e~~i~~A~~l~~l~~~~~i~~~n~~IKI-----PaT~~Gi~A~~~L~~~GI~vn~TlvFS~~Qa~aaa~Aga~~iS 180 (334)
T 3hjz_A 106 SFDTEATVKKARKLINLYKNFGIEKERILIKI-----AATWEGIKAAEILEKEGIKCNLTLLFNFCQAVTCANANITLIS 180 (334)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEE-----ECSHHHHHHHHHHHHTTCCEEEESCCSHHHHHHHHHTTCSEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEC-----CCCHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHCCCEEE
T ss_conf 24789999999999999998178877368827-----9977899999999975985347775059999999981972785
Q ss_pred CC--CC----------CC---------CHHHHHHHHHHHCCCCCCCEECHH---HHHHHHHHCCH
Q ss_conf 46--67----------67---------799999999987788577300336---66435430101
Q gi|255764463|r 175 PS--EM----------MD---------GRVQEIRKKLDSHGHINVGIMPYV---AKFNSSFYGPY 215 (337)
Q Consensus 175 PS--dM----------MD---------GrV~aIR~~Ld~~g~~~~~ImsYs---aKfaS~fYgPF 215 (337)
|= -+ +. -.|..|++.+...|+. |.||+=| ..+...+.|+-
T Consensus 181 pfvgRid~~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-T~v~~As~r~~~~v~~L~G~d 244 (334)
T 3hjz_A 181 PFVGRILDWHKAKTGKTSFIGAEDPGVISVTQIYKYFKEKGFK-TEVXGASFRNLDEIKELAGCD 244 (334)
T ss_dssp CBHHHHHHHHHHHHCCCCCCGGGCHHHHHHHHHHHHHHHHTCC-CEEEEBCCSSHHHHHHTTTCS
T ss_pred EECCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CEEECCCCCCHHHHHHHCCCC
T ss_conf 3124421175511432235566640699999999999975987-477337778777899973898
No 155
>>2dgd_A 223AA long hypothetical arylmalonate decarboxylase; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii} (A:108-202)
Probab=43.47 E-value=24 Score=16.41 Aligned_cols=80 Identities=13% Similarity=0.046 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEE-EE
Q ss_conf 79999999998778857730033666435430101675310244677774431572114788988887664089879-95
Q gi|255764463|r 181 GRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADML-LV 259 (337)
Q Consensus 181 GrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~l-MV 259 (337)
-....+++.|.++||.=+.+-+. ....++.-=..++..-.++.++...| ..+||.+ +.
T Consensus 13 ~v~~~~~~~~~~~G~eV~~~~~l--------------------g~~~~~~ia~i~~~~i~~~~~~~~~d-~p~adAi~is 71 (95)
T 2dgd_A 13 ERTLEEVEWWRNKGFEIVGYDGL--------------------GKIRGIDISNTPIFTIYRLVKRHLNE-VLKADAVYIA 71 (95)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEEC--------------------CCCSHHHHHTCCHHHHHHHHHTTHHH-HTTSSEEEEC
T ss_pred HHHHHHHHHHHHCCEEEEEECCC--------------------CCCCCCCCCCCCHHHHHHHHHHHHHC-CCCCCEEEEE
T ss_conf 65799999999679058530024--------------------75654210239999999999985401-3468789994
Q ss_pred CCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 5311458999999962499899
Q gi|255764463|r 260 KPGLPYLDVCFRIKEKFGLPTF 281 (337)
Q Consensus 260 KPa~~yLDii~~~k~~~~~P~~ 281 (337)
=-+|+-+++|.++...+++||.
T Consensus 72 CTnl~t~~~i~~lE~~lg~PVi 93 (95)
T 2dgd_A 72 CTALSTYEAVQYLHEDLDXPVV 93 (95)
T ss_dssp CTTSCCTTHHHHHHHHHTSCEE
T ss_pred CCCCCHHHHHHHHHHHHCCCEE
T ss_conf 1586478999999999898999
No 156
>>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} (A:122-366)
Probab=43.04 E-value=24 Score=16.32 Aligned_cols=66 Identities=12% Similarity=0.026 Sum_probs=49.6
Q ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECC
Q ss_conf 81104888786328899999999999988893676330256334554454215765379999999997301-44798613
Q gi|255764463|r 52 TVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDV 130 (337)
Q Consensus 52 ~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DV 130 (337)
.+..|+..-.+.-.+.+.+.+++++..+.|.++|-+=.+...- + -..+.++++++.++ ++-++.|.
T Consensus 5 ~r~~vp~y~s~~~~~~e~~~~~~~~~~~~G~~~~Kikig~~~~-~------------~d~~~i~a~r~~~g~~~~l~vDa 71 (245)
T 1tkk_A 5 YRDTLETDYTVSVNSPEEMAADAENYLKQGFQTLKIKVGKDDI-A------------TDIARIQEIRKRVGSAVKLRLDA 71 (245)
T ss_dssp CCSEEEBCEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSSCH-H------------HHHHHHHHHHHHHCSSSEEEEEC
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCH-H------------HHHHHHHHHHHHCCCCEEECCCC
T ss_conf 4555432111222221000123455454303401110122113-4------------54544354655068713330123
No 157
>>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative; 2.04A {Staphylococcus aureus} (A:)
Probab=43.00 E-value=24 Score=16.32 Aligned_cols=65 Identities=15% Similarity=0.230 Sum_probs=53.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 7211478898888766408987995---53114589999999624-99899993461899999999888978
Q gi|255764463|r 235 DPANVQEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 235 d~~n~~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
...|..||+.... +...|++.+ -|++.-+++++.+|+.+ ..|+...-.+++-.....|.+.|..+
T Consensus 34 ~a~~~~~al~~~~---~~~pdiiilDi~lp~~~G~~l~~~i~~~~~~~~ii~ls~~~~~~~~~~a~~~Ga~~ 102 (133)
T 3b2n_A 34 DTDNGLDAMKLIE---EYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDA 102 (133)
T ss_dssp EESCHHHHHHHHH---HHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSE
T ss_pred EECCHHHHHHHHH---HCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCE
T ss_conf 9899999999998---65998999957789998999999999868999589995789999999999879988
No 158
>>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str} (A:1-235)
Probab=42.93 E-value=24 Score=16.31 Aligned_cols=181 Identities=12% Similarity=0.041 Sum_probs=89.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCCC
Q ss_conf 28899999999999988893676330256334554454215765379999999997301-44798613327100114310
Q gi|255764463|r 64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHDG 142 (337)
Q Consensus 64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHcG 142 (337)
+.-.+.+.+.++.+.+.|+..+++.+...+.. .+..+ .-.+.++.... .+-||+-+.
T Consensus 43 ~iD~~~~~~~i~~l~~~Gv~gi~v~G~tGE~~-------~Lt~e----Er~~~v~~~~~~~~pvi~gv~----------- 100 (235)
T 2hmc_A 43 TPDFDALVRKGKELIADGXSAVVYCGSXGDWP-------LLTDE----QRXEGVERLVKAGIPVIVGTG----------- 100 (235)
T ss_dssp SBCHHHHHHHHHHHHHTTCCCEEESSGGGTGG-------GSCHH----HHHHHHHHHHHTTCCEEEECC-----------
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECEECCCCC-------CCCHH----HHHHHHHHHHCCCCCCCCCCC-----------
T ss_conf 82999999999999977999999783375723-------08999----999999987415775100442-----------
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCE--EECCCCC-----CCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCH
Q ss_conf 013654462899999999999999628973--5246676-----779999999998778857730033666435430101
Q gi|255764463|r 143 ILCDGEIVNDETIELISHAAVIQADAGADI--IAPSEMM-----DGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPY 215 (337)
Q Consensus 143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaDi--vAPSdMM-----DGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPF 215 (337)
. .+.+...+++....++|+|. |.|.-+- ++.+...++..+.. .+.+|+=|
T Consensus 101 --~-------~~t~~~i~~a~~A~~~Gadavlv~~P~~~~~~~~~~i~~~~~~ia~~~--~~~pi~iy------------ 157 (235)
T 2hmc_A 101 --A-------VNTASAVAHAVHAQKVGAKGLXVIPRVLSRGSVIAAQKAHFKAILSAA--PEIPAVIY------------ 157 (235)
T ss_dssp --C-------SSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHS--TTSCEEEE------------
T ss_pred --H-------HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCC--CCCEEEEE------------
T ss_conf --0-------137788888878998288502220011233354156899998663158--77448887------------
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH--HHHHHCCCCEEEEECCHHHHHHH
Q ss_conf 6753102446777744315721147889888876640898799553114589999--99962499899993461899999
Q gi|255764463|r 216 RDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCF--RIKEKFGLPTFAYQVSGEYAMIK 293 (337)
Q Consensus 216 RdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~--~~k~~~~~P~~aYqVSGEYami~ 293 (337)
+.+......--.+...-+.|---++.+|-+-.-....+ ++.....-.+..|--.+|.-
T Consensus 158 -----------------n~P~~~g~~~~~~~l~~La~~pnvvgiK~~~~~~~~~~~~~~~~~~~~~~~i~~G~d~~~--- 217 (235)
T 2hmc_A 158 -----------------NSPYYGFATRADLFFALRAEHKNLVGFKEFGGPADXRYAAENITSRDDEVTLXIGVDTAV--- 217 (235)
T ss_dssp -----------------EBGGGTBCCCHHHHHHHHHHCTTEEEEEECSCHHHHHHHHHHTSCSSSSCEEEECSGGGH---
T ss_pred -----------------ECCCCCCCCCCHHHHHHHCCCCHHEEEECCCCCHHHHHHHHHHHCCCCCEEECCCCCHHH---
T ss_conf -----------------034464544421344330131011233116774167777777641575335436872145---
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECH
Q ss_conf 999888978899999999999772699998201
Q gi|255764463|r 294 AASLQGWINKNDAMMESLLAFKRAGCDGIFTYF 326 (337)
Q Consensus 294 ~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~ 326 (337)
+..+..+||+..+|=.
T Consensus 218 -----------------l~~~l~~Ga~G~is~~ 233 (235)
T 2hmc_A 218 -----------------VHGFVNCGATGAITGI 233 (235)
T ss_dssp -----------------HHHHHHSCCCEEEESG
T ss_pred -----------------HHHHHCCCCCEEEECC
T ss_conf -----------------5665235787687323
No 159
>>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} (A:127-359)
Probab=42.66 E-value=25 Score=16.28 Aligned_cols=137 Identities=12% Similarity=0.127 Sum_probs=74.8
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCC
Q ss_conf 1104888786328899999999999988893676330256334554454215765379999999997301-447986133
Q gi|255764463|r 53 VESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVA 131 (337)
Q Consensus 53 k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVc 131 (337)
++.|+.---....+.+.+.++++++.+.|.++|-+=.+..... -..+.++++++.++ ++.++.|.-
T Consensus 5 r~~i~~y~s~~~~~~e~~~~~~~~~~~~G~~~~Kikig~~~~~-------------~d~~~i~~~r~~~g~~~~l~vDan 71 (233)
T 1mdl_A 5 ARPVQAYDSHSLDGVKLATERAVTAAELGFRAVKTRIGYPALD-------------QDLAVVRSIRQAVGDDFGIMVDYN 71 (233)
T ss_dssp CCCEEEEEECCSCHHHHHHHHHHHHHHTTCSEEEEECCCSSHH-------------HHHHHHHHHHHHHCSSSEEEEECT
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCH-------------HHHHHHHHHHHHCCCCCEEEECCC
T ss_conf 4316777521579889999999999984788244312676618-------------889999999986199845845544
Q ss_pred CCHHHCCC---------CCCCC--CC------------------CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCH
Q ss_conf 27100114---------31001--36------------------544628999999999999996289735246676779
Q gi|255764463|r 132 LDPFTIHG---------HDGIL--CD------------------GEIVNDETIELISHAAVIQADAGADIIAPSEMMDGR 182 (337)
Q Consensus 132 Lc~YT~hG---------HcGi~--~~------------------g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGr 182 (337)
+.||..- +.|+. .+ -.|--|+++..+....-......+|++-|--+--|-
T Consensus 72 -~~~~~~~a~~~~~~l~~~~~~~iEeP~~~~~~~~~~~l~~~~~~pia~~E~~~~~~~~~~~i~~~~~d~i~~d~~~~GG 150 (233)
T 1mdl_A 72 -QSLDVPAAIKRSQALQQEGVTWIEEPTLQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGG 150 (233)
T ss_dssp -TCSCHHHHHHHHHHHHHHTCSCEECCSCTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTTTH
T ss_pred -CCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCEECC
T ss_conf -5788889877677763468626207999789999999985116980278751220317999986996299737554587
Q ss_pred HHHHHHHHHHCCCCCCCEECH
Q ss_conf 999999998778857730033
Q gi|255764463|r 183 VQEIRKKLDSHGHINVGIMPY 203 (337)
Q Consensus 183 V~aIR~~Ld~~g~~~~~ImsY 203 (337)
+...++...-..-.++.++.+
T Consensus 151 it~~~~~~~~A~~~gi~~~~h 171 (233)
T 1mdl_A 151 VTGWIRASALAQQFGIPMSSH 171 (233)
T ss_dssp HHHHHHHHHHHHHTTCCBCCB
T ss_pred HHHHHHHHHHHHHCCCEEECC
T ss_conf 889999999999869978648
No 160
>>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} (A:1-282)
Probab=42.64 E-value=25 Score=16.28 Aligned_cols=161 Identities=19% Similarity=0.213 Sum_probs=92.4
Q ss_pred HHHHHCCCCEEEEEE-CCCCC--CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCH
Q ss_conf 999988893676330-25633--455445421576537999999999730144798613327100114310013654462
Q gi|255764463|r 75 KQVADLGIPAIAIFP-NIPMD--LRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVN 151 (337)
Q Consensus 75 e~~~~lGI~av~LFp-~I~~~--~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdN 151 (337)
.-+.+.|...+.+=+ .+... -.+..+.- +-.-+...++.|.... ++-|+.|. ++|+.+
T Consensus 36 ~~~~~~Gf~~i~~sg~~~a~~~~g~pd~~~~---~~~~~~~~~~~i~~~~-~~PliaD~------d~G~g~--------- 96 (282)
T 3eoo_A 36 KMAEAVGFKAVYLSGGGVAANSLGIPDLGIS---TMDDVLVDANRITNAT-NLPLLVDI------DTGWGG--------- 96 (282)
T ss_dssp HHHHHHTCSCEEECHHHHHHHTTCCCSSSCC---CHHHHHHHHHHHHHHC-CSCEEEEC------TTCSSS---------
T ss_pred HHHHHCCCCEEEECHHHHHHHHCCCCCCCHH---HHHHHHHHHHHHHCCC-CCCCEEEC------CCCCCC---------
T ss_conf 9999849999983289999984699986636---6778998776542035-78704752------467882---------
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEECCCCCC----------------CHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCH
Q ss_conf 89999999999999962897352466767----------------79999999998778857730033666435430101
Q gi|255764463|r 152 DETIELISHAAVIQADAGADIIAPSEMMD----------------GRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPY 215 (337)
Q Consensus 152 D~Tl~~L~k~Al~~A~AGaDivAPSdMMD----------------GrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPF 215 (337)
. +...+.+-.+.+|||+.|---|-.. +.++.|+.+.+..+-.++-|
T Consensus 97 ~---~~v~~~v~~~~~aGa~gv~iED~~~~k~~~~~~~~~~i~~~~~~~~i~~a~~~~~~~~~~i--------------- 158 (282)
T 3eoo_A 97 A---FNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVI--------------- 158 (282)
T ss_dssp H---HHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEE---------------
T ss_pred C---HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE---------------
T ss_conf 1---8999999999976984788642446543455543345688999889999996458976289---------------
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 6753102446777744315721147889888876640898799553114589999999624998999934
Q gi|255764463|r 216 RDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQV 285 (337)
Q Consensus 216 RdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqV 285 (337)
--+|......-..|++.......+-|||.+++ |+++-.+.++.+.+....|+..-..
T Consensus 159 ------------~ARtda~~~~~~~eai~Ra~ay~~aGAd~i~~-~~~~~~e~~~~~~~~~~~p~~~~~~ 215 (282)
T 3eoo_A 159 ------------MARTDAAAAEGIDAAIERAIAYVEAGADMIFP-EAMKTLDDYRRFKEAVKVPILANLT 215 (282)
T ss_dssp ------------EEEECTHHHHHHHHHHHHHHHHHHTTCSEEEE-CCCCSHHHHHHHHHHHCSCBEEECC
T ss_pred ------------EEECCCCCCCCHHHHHHHHHHHHHHCCCEEEE-CCCCCHHHHHHHHHHCCCCEEEECC
T ss_conf ------------98321122389999999999999847929982-4889999999999865998675315
No 161
>>2o7s_A DHQ-SDH, bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase; NADPH, dehydroshikimate, bifunctional enzyme, oxidoreductase; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* (A:1-219)
Probab=42.56 E-value=25 Score=16.27 Aligned_cols=164 Identities=21% Similarity=0.199 Sum_probs=86.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCC
Q ss_conf 88999999999999888936763302563345544542157653799999999973014479861332710011431001
Q gi|255764463|r 65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGIL 144 (337)
Q Consensus 65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~ 144 (337)
-+.+.+..+++++...|...|=|= ++ -.. +.-..+.+..+++.++--+|.| +-++.+-|-.
T Consensus 14 ~~~~e~~~~~~~~~~~~~D~vElR--lD-~l~----------~~~~~~~i~~l~~~~~~piI~T------~R~~~eGG~~ 74 (219)
T 2o7s_A 14 DSIDKMVIETSKAHELGADLVEIR--LD-WLK----------DFNPLEDLKTIIKKSPLPTLFT------YRPKWEGGQY 74 (219)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEE--GG-GCS----------SCCHHHHHHHHHHHCSSCEEEE------CCBGGGTSSB
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEE--EE-CCC----------CCCCHHHHHHHHHHCCCCEEEE------ECCHHHCCCC
T ss_conf 999999999999865699989998--50-444----------6782999999997389928999------6866548988
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCC-CCCCEECHHHHHHHHHHCCHHHHHHCCC
Q ss_conf 365446289999999999999962897352466767799999999987788-5773003366643543010167531024
Q gi|255764463|r 145 CDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGH-INVGIMPYVAKFNSSFYGPYRDAISTRD 223 (337)
Q Consensus 145 ~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~-~~~~ImsYsaKfaS~fYgPFRdA~~S~p 223 (337)
. .+..+-++.|. ...+.|+|+|-=-- -+-..+.+.+..... ....|.||-
T Consensus 75 ~---~~~~~~~~ll~----~~~~~~~d~iDiE~---~~~~~~~~~~~~~~~~~~kiI~S~H------------------- 125 (219)
T 2o7s_A 75 E---GDENERRDVLR----LAMELGADYIDVEL---QVASEFIKSIDGKKPGKFKVIVSSH------------------- 125 (219)
T ss_dssp C---SCHHHHHHHHH----HHHHHTCSEEEEEH---HHHHHHHHHTTTCCCTTCEEEEEEE-------------------
T ss_pred C---CCHHHHHHHHH----HHHHHCCCEEEEEC---CCCHHHHHHHHHHHCCCCEEEEEEC-------------------
T ss_conf 8---99999999999----99996999999978---8757899999984049988999966-------------------
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHH-CCCCEE-EECCCHHHHHHHH--HHHHHCCCCEEEEEC
Q ss_conf 4677774431572114788988887664-089879-9553114589999--999624998999934
Q gi|255764463|r 224 LLKGDKKTYYLDPANVQEAIREASIDIQ-ESADML-LVKPGLPYLDVCF--RIKEKFGLPTFAYQV 285 (337)
Q Consensus 224 ~~~gdr~sYQmd~~n~~eA~~e~~~D~~-EGAD~l-MVKPa~~yLDii~--~~k~~~~~P~~aYqV 285 (337)
.| +..-..+.+.+...+.. -|||++ ++-++-.+-|+.+ ..+...+.|+.+|..
T Consensus 126 ~f---------~~tp~~~~l~~~~~~~~~~gadi~Kia~~~~~~~D~~~ll~~~~~~~~p~i~~~M 182 (219)
T 2o7s_A 126 NY---------QNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMFHITSKAQVPTIGLVM 182 (219)
T ss_dssp CS---------SCCCCHHHHHHHHHHHHTTTCSEEEEEEECSSGGGHHHHHHHHHHCSSCEEEEEE
T ss_pred CC---------CCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 79---------9986889999999999984877665511559888999999997543697589854
No 162
>>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} (A:117-328,A:386-528)
Probab=41.99 E-value=25 Score=16.22 Aligned_cols=133 Identities=17% Similarity=0.247 Sum_probs=82.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC---CCCCCCCCCC------HHHHHHHHHHHHHCCCEEEECCCCCHHH
Q ss_conf 899999999999988893676330256334554---4542157653------7999999999730144798613327100
Q gi|255764463|r 66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNN---TGSHIIDPDN------LINEGICAIKKNIPNIGIITDVALDPFT 136 (337)
Q Consensus 66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~---~GseA~n~dg------lv~rAIr~IK~~fpdl~vi~DVcLc~YT 136 (337)
+.+.+.+.+..+.++||++|-|-|+-+..--.. .+..-+.++. =..+.|.+.++. .|.||.||.+-...
T Consensus 26 tf~~l~e~Ld~Lk~LGitaI~L~Pv~~~~g~~~wGY~~~~~~~id~~yGt~~dlk~lVd~aH~~--GI~VilDvV~NH~g 103 (355)
T 2bhu_A 26 TYRAAAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRL--GLGVFLDVVYNHFG 103 (355)
T ss_dssp SHHHHHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEECCSCCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEECCCCCCCCC
T ss_conf 7879998886998627447996333431346775434333302347788899999999999763--96896245655556
Q ss_pred CCCCC------CCC---------CCCCCCHHHHHHHHHHHHHHHHH-CCCCEEE---CCCCCC----CHHHHHHHHHHHC
Q ss_conf 11431------001---------36544628999999999999996-2897352---466767----7999999999877
Q gi|255764463|r 137 IHGHD------GIL---------CDGEIVNDETIELISHAAVIQAD-AGADIIA---PSEMMD----GRVQEIRKKLDSH 193 (337)
Q Consensus 137 ~hGHc------Gi~---------~~g~IdND~Tl~~L~k~Al~~A~-AGaDivA---PSdMMD----GrV~aIR~~Ld~~ 193 (337)
.+|.. ..+ .+=..+|.+..+.+...+.-..+ -|+|-+= -..|.| .-...+++..++.
T Consensus 104 ~d~~~l~~~~p~y~~~~~~~~wg~~lN~~~peVr~~l~~~~~~Wi~eygIDGfRlDav~~i~~~~~~~~l~el~~~~~~~ 183 (355)
T 2bhu_A 104 PSGNYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHFDGLRLDATPYMTDDSETHILTELAQEIHEL 183 (355)
T ss_dssp SSSCCHHHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCCSEEEETTGGGCCCCSSSCHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 65563344687544566765654453546742666666766214000064258861221123334431046778888764
Q ss_pred CCCCCCE
Q ss_conf 8857730
Q gi|255764463|r 194 GHINVGI 200 (337)
Q Consensus 194 g~~~~~I 200 (337)
+.....|
T Consensus 184 ~~~~~li 190 (355)
T 2bhu_A 184 GGTHLLL 190 (355)
T ss_dssp CSCCEEE
T ss_pred CCCCEEE
T ss_conf 7870587
No 163
>>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} (A:1-88,A:219-301,A:407-443,A:578-660)
Probab=41.97 E-value=25 Score=16.21 Aligned_cols=106 Identities=16% Similarity=0.167 Sum_probs=62.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC-----CCC-CH---HHHHHHHHHHHHCCCEEEECCCC---
Q ss_conf 8899999999999988893676330256334554454215-----765-37---99999999973014479861332---
Q gi|255764463|r 65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHII-----DPD-NL---INEGICAIKKNIPNIGIITDVAL--- 132 (337)
Q Consensus 65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~-----n~d-gl---v~rAIr~IK~~fpdl~vi~DVcL--- 132 (337)
-....+.+.+..+.++|+++|-|=|..+.......|-... ++. |= ..+.|++++++ .|-||.|+..
T Consensus 14 G~~~gi~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~~gY~~~d~~~id~~~Gt~~dfk~lv~~~H~~--GikVilDiV~~~~ 91 (291)
T 1iv8_A 14 FNFGDVIDNLWYFXDLGVSHLYLSPVLMASPGSNHGYDVIDHSRINDELGGEKEYRRLIETAHTI--GLGIIQDIVPDLD 91 (291)
T ss_dssp BCHHHHHHTHHHHHHHTCCEEEECCCEEECTTCSSCCSEEEEEEECTTTTHHHHHHHHHHHHHHT--TCEEEEEECCGSC
T ss_pred CCHHHHHHCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHC--CCEEEEEECCCCC
T ss_conf 99999997087988689768997965778899998816637122305449999999999999988--9989999788488
Q ss_pred ------------------------------------------CHHHCCCCCCCCC----CC-CCCHHHHHHHHHHHHHHH
Q ss_conf ------------------------------------------7100114310013----65-446289999999999999
Q gi|255764463|r 133 ------------------------------------------DPFTIHGHDGILC----DG-EIVNDETIELISHAAVIQ 165 (337)
Q Consensus 133 ------------------------------------------c~YT~hGHcGi~~----~g-~IdND~Tl~~L~k~Al~~ 165 (337)
-|...||--|.=. ++ -||+++-+..|.+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 168 (291)
T 1iv8_A 92 VDGYRIDHIDGLYDPEKYINDLRSIIKNXIIIVEKILGFQEELKLNSDGTTGYDFLNYSNLLFNFNQEIMDSIYE---NF 168 (291)
T ss_dssp CSEEEETTGGGCSCHHHHHHHHHHHHTTCEEEECCCCCTTCCCCSSSSEESSHHHHHHHHGGGCCCHHHHHHHHH---HH
T ss_pred CEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHH---HC
T ss_conf 329973476836770899999999717875999874377884767767655566356664202534788999998---51
Q ss_pred HHCCCCEEEC
Q ss_conf 9628973524
Q gi|255764463|r 166 ADAGADIIAP 175 (337)
Q Consensus 166 A~AGaDivAP 175 (337)
+--|..+.--
T Consensus 169 ~~~~~~~~nf 178 (291)
T 1iv8_A 169 TAENEVGSDL 178 (291)
T ss_dssp TCCCCTTCCT
T ss_pred CCCHHCCCCH
T ss_conf 4881036882
No 164
>>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino- acid biosynthesis, schiff base, cytoplasm, diaminopimelate biosynthesis; HET: MES; 1.99A {Streptococcus pneumoniae} (A:1-214)
Probab=41.96 E-value=25 Score=16.21 Aligned_cols=154 Identities=14% Similarity=0.117 Sum_probs=76.0
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCC
Q ss_conf 328899999999999988893676330256334554454215765379999999997301-4479861332710011431
Q gi|255764463|r 63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHD 141 (337)
Q Consensus 63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHc 141 (337)
.+...+.+.+.++.+.+.|++++.+++...+-. .+. ..=-.+-++...+..+ .+.|+.-++=
T Consensus 23 g~iD~~~~~~~i~~l~~~G~~gi~v~G~tGE~~-------~Lt-~~Er~~l~~~~~~~~~~~~~vi~g~~~--------- 85 (214)
T 3h5d_A 23 GSINFDAIPALIEHLLAHHTDGILLAGTTAESP-------TLT-HDEELELFAAVQKVVNGRVPLIAGVGT--------- 85 (214)
T ss_dssp SSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGG-------GSC-HHHHHHHHHHHHHHSCSSSCEEEECCC---------
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECEECCCHH-------HCC-HHHHHHHHHHHHHHHCCCCCEEEECCC---------
T ss_conf 695999999999999977999899685221452-------489-999999999999973699868974576---------
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCC-EE--ECCCC----CCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCC
Q ss_conf 001365446289999999999999962897-35--24667----677999999999877885773003366643543010
Q gi|255764463|r 142 GILCDGEIVNDETIELISHAAVIQADAGAD-II--APSEM----MDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGP 214 (337)
Q Consensus 142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaD-iv--APSdM----MDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgP 214 (337)
.+.+...+.+....++|+| ++ .|.-. .++.+..-|...+. .+.+|+=|.....
T Consensus 86 -----------~~t~~~i~~a~~a~~~g~~~~l~~~pp~~~~~~~~~i~~~~~~i~~~---~~~pi~lYn~P~~------ 145 (214)
T 3h5d_A 86 -----------NDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADA---SDLPIIIYNIPGR------ 145 (214)
T ss_dssp -----------SSHHHHHHHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHS---CSSCEEEEECHHH------
T ss_pred -----------CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC---CCCCEEEEECCCC------
T ss_conf -----------42023456777777640556146338878899999999999999704---7997899957751------
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHC
Q ss_conf 16753102446777744315721147889888876640898799553114589999999624
Q gi|255764463|r 215 YRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKF 276 (337)
Q Consensus 215 FRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~ 276 (337)
.-+.+++ +...-+.+---++-+|-+-+-+..++.++...
T Consensus 146 ---------------~g~~~~~--------~~l~~La~~p~vvgiK~~~~~~~~~~~~~~~~ 184 (214)
T 3h5d_A 146 ---------------VVVELTP--------ETMLRLADHPNIIGVKECTSLANMAYLIEHKP 184 (214)
T ss_dssp ---------------HSSCCCH--------HHHHHHHTSTTEEEEEECSCHHHHHHHHHHCC
T ss_pred ---------------CCCCCCH--------HHHHHHHCCCCEEEEEECCHHHHHHHHHHHCC
T ss_conf ---------------3788879--------99999854788887751650578999998659
No 165
>>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} (A:127-356)
Probab=41.77 E-value=25 Score=16.19 Aligned_cols=136 Identities=14% Similarity=0.061 Sum_probs=77.3
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEC
Q ss_conf 881104888786328899999999999988893676330256334554454215765379999999997301-4479861
Q gi|255764463|r 51 KTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITD 129 (337)
Q Consensus 51 ~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~D 129 (337)
..++.|+..--+...+.+.+.+++++..+.|.++|-+=.+.+.. +| -+.|+++++.++ ++-++.|
T Consensus 4 ~~r~~ip~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~-~d-------------~~~v~~ir~~~g~~~~l~lD 69 (230)
T 3eez_A 4 GSRTPRPIASSVGAKSVEETRAVIDRYRQRGYVAHSVKIGGDVE-RD-------------IARIRDVEDIREPGEIVLYD 69 (230)
T ss_dssp CCCSCEEBBCCBCSCCHHHHHHHHHHHHHTTCCEEEEECCSCHH-HH-------------HHHHHHHTTSCCTTCEEEEE
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH-HH-------------HHHHHHHHHHHHHHHHEECC
T ss_conf 56674321111122104666678999987642332023221015-79-------------99999777643003210001
Q ss_pred CCC--------------CH---------HHCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHH
Q ss_conf 332--------------71---------001143100136--54462899999999999999628973524667677999
Q gi|255764463|r 130 VAL--------------DP---------FTIHGHDGILCD--GEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQ 184 (337)
Q Consensus 130 VcL--------------c~---------YT~hGHcGi~~~--g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~ 184 (337)
..- .+ ...+++-.+-.. --|--|+++..+....-.....++|++-+--+--|-+.
T Consensus 70 an~~~~~~~A~~~~~~l~~~~~~~~E~P~~~~~~~~~~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~~~~~~~~~GGit 149 (230)
T 3eez_A 70 VNRGWTRQQALRVMRATEDLHVMFEQPGETLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLT 149 (230)
T ss_dssp CTTCCCHHHHHHHHHHTGGGTCCEECCSSSHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHH
T ss_pred CCCCCCCHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEECCCC
T ss_conf 12244503455430244430587421210246665411231122234543332045555543375222455432254642
Q ss_pred HHHHHHHHCCCCCCCE
Q ss_conf 9999998778857730
Q gi|255764463|r 185 EIRKKLDSHGHINVGI 200 (337)
Q Consensus 185 aIR~~Ld~~g~~~~~I 200 (337)
..++.++...-.++.+
T Consensus 150 ~~~~i~~~A~~~gi~~ 165 (230)
T 3eez_A 150 RAARMRDIALTHGIDM 165 (230)
T ss_dssp HHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHCCCCEE
T ss_conf 6678888875159748
No 166
>>1w4t_A Arylamine N-acetyltransferase; 5- aminosalicylic acid, NAT, xenobiotic metabolism, acyltransferase; 1.95A {Pseudomonas aeruginosa} (A:1-70,A:225-299)
Probab=40.69 E-value=26 Score=16.08 Aligned_cols=58 Identities=10% Similarity=0.058 Sum_probs=44.7
Q ss_pred HHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHH--------------HHHHCCHHHHHHCC
Q ss_conf 99628973524667677999999999877885773003366643--------------54301016753102
Q gi|255764463|r 165 QADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFN--------------SSFYGPYRDAISTR 222 (337)
Q Consensus 165 ~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfa--------------S~fYgPFRdA~~S~ 222 (337)
|-.+|+=++..|+||...---+..-|..-||..-.--++.+=.+ +.++|||+...=.+
T Consensus 8 ~~~~~~~vp~~~~~~~~~~~dl~aYL~RIG~~g~~~ptletL~~Lh~aH~~~IPFENLdv~lGpFt~~L~~a 79 (145)
T 1w4t_A 8 HHHSSGLVPRGSHMTPLTPEQTHAYLHHIGIDDPGPPSLANLDRLIDAHLRRVAFENLDVLLDVFRQGLKAA 79 (145)
T ss_dssp ------------CCCCCCHHHHHHHHHHHTCSCCCSSCHHHHHHHHHHHHHHSCEECHHHHTTGGGTSCEEE
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEE
T ss_conf 333467443876688899999999998669999999999999999999734288367114339444215999
No 167
>>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} (A:122-346)
Probab=40.34 E-value=27 Score=16.05 Aligned_cols=134 Identities=14% Similarity=0.059 Sum_probs=82.0
Q ss_pred EECCCCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCC
Q ss_conf 1048887-86328899999999999988893676330256334554454215765379999999997301-447986133
Q gi|255764463|r 54 ESINSMP-DVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVA 131 (337)
Q Consensus 54 ~~I~SMP-Gv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVc 131 (337)
+.|+..- +.+..+.+.+...++.+.+.|.++|-+-.+... |. +.|+++++.++ ++.++.|..
T Consensus 7 ~~i~vy~~~~~~~~~e~~~~~~~~~~~~G~~~~Kikvg~~~---d~-------------~~i~~~r~~~g~~~~l~~D~n 70 (225)
T 1sjd_A 7 DSVPCGVSVGIMDTIPQLLDVVGGYLDEGYVRIKLKIEPGW---DV-------------EPVRAVRERFGDDVLLQVDAN 70 (225)
T ss_dssp SEEEBEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECBTTB---SH-------------HHHHHHHHHHCTTSEEEEECT
T ss_pred CEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC---HH-------------HHHHHHHHHHCCCCEEEEECC
T ss_conf 11467774113544899999999865302332222356440---57-------------889999998535752775203
Q ss_pred CCHHHCCCCC--------CCC--CCC-CCCHHHHHHHHH-----------------HHHHHHHHCCCCEEECCCCCCCHH
Q ss_conf 2710011431--------001--365-446289999999-----------------999999962897352466767799
Q gi|255764463|r 132 LDPFTIHGHD--------GIL--CDG-EIVNDETIELIS-----------------HAAVIQADAGADIIAPSEMMDGRV 183 (337)
Q Consensus 132 Lc~YT~hGHc--------Gi~--~~g-~IdND~Tl~~L~-----------------k~Al~~A~AGaDivAPSdMMDGrV 183 (337)
+.+|..--. +++ .+- ..++-+....|. ...-...+-.+|+|-|-=+--|-+
T Consensus 71 -~~~~~~~a~~~~~~~~~~~~~~EeP~~~~d~~~~~~l~~~~~~pia~gE~~~~~~~~~~~i~~~~~d~i~~d~~~~GGi 149 (225)
T 1sjd_A 71 -TAYTLGDAPQLARLDPFGLLLIEQPLEEEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGY 149 (225)
T ss_dssp -TCCCGGGHHHHHTTGGGCCSEEECCSCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSH
T ss_pred -CCCCHHHHHHHHHCCCCCCEEEECHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCC
T ss_conf -3455566777764120475123200110113442345650355532343245630223443158458999636446663
Q ss_pred HHHHHHHHHCCCCCCCEECHH
Q ss_conf 999999987788577300336
Q gi|255764463|r 184 QEIRKKLDSHGHINVGIMPYV 204 (337)
Q Consensus 184 ~aIR~~Ld~~g~~~~~ImsYs 204 (337)
...++..+...-.++.++..+
T Consensus 150 t~~~~i~~~A~~~gi~~~~h~ 170 (225)
T 1sjd_A 150 LEARRVHDVCAAHGIPVWCGG 170 (225)
T ss_dssp HHHHHHHHHHHHTTCCEEECC
T ss_pred CHHHHHHHHHHHCCCEEECCC
T ss_conf 024469999998799585257
No 168
>>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} (A:164-276)
Probab=39.36 E-value=28 Score=15.95 Aligned_cols=61 Identities=25% Similarity=0.239 Sum_probs=31.8
Q ss_pred HHHHHHHHCCCCEEEECCCHH--HHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 888876640898799553114--589999999624-99899993461899999999888978899999999999772699
Q gi|255764463|r 244 REASIDIQESADMLLVKPGLP--YLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCD 320 (337)
Q Consensus 244 ~e~~~D~~EGAD~lMVKPa~~--yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd 320 (337)
.|+..=.+.|||++++=|.-+ -...++.++... .+|+.|= |-++. |.+..+..||||
T Consensus 45 ~e~~~a~~~gaD~i~~~~~~~~~~~~~v~~~~~~~~~ipi~a~---------------GGIt~-----~~i~~~~~aGad 104 (113)
T 2jbm_A 45 QEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEAS---------------GGITL-----DNLPQFCGPHID 104 (113)
T ss_dssp HHHHHHHHTTCSEEEEESCCHHHHHHHHHHHHHHCTTSEEEEE---------------SSCCT-----TTHHHHCCTTCC
T ss_pred HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEE---------------CCCCH-----HHHHHHHHCCCC
T ss_conf 9999999759989997589999999999998464896699998---------------99989-----999999973999
Q ss_pred EEEE
Q ss_conf 9982
Q gi|255764463|r 321 GIFT 324 (337)
Q Consensus 321 ~Iit 324 (337)
.|..
T Consensus 105 ~i~v 108 (113)
T 2jbm_A 105 VISM 108 (113)
T ss_dssp EEEC
T ss_pred EEEC
T ss_conf 9985
No 169
>>3k13_A 5-methyltetrahydrofolate-homocysteine methyltransferase; 5-methyltetrahydrofolate,methyltransferase, TIM barrel; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron} (A:)
Probab=39.18 E-value=28 Score=15.93 Aligned_cols=187 Identities=17% Similarity=0.164 Sum_probs=102.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCC
Q ss_conf 28899999999999988893676330256334554454215765379999999997301447986133271001143100
Q gi|255764463|r 64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGI 143 (337)
Q Consensus 64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi 143 (337)
..+.+.+++.+++..+.|..-+-+=+.. ...+.. .+-..+..+|+.+++.+. +- +|+|.|...=.---
T Consensus 33 ~~~~~~~~~~a~~~~~~GA~iiDig~~~--~~v~~e-----eE~~rl~~~i~~i~~~~~-~p----isiDT~~~~v~eaa 100 (300)
T 3k13_A 33 EKKYDEALSIARQQVEDGALVIDVNXDD--GLLDAR-----TEXTTFLNLIXSEPEIAR-VP----VXIDSSKWEVIEAG 100 (300)
T ss_dssp TTCHHHHHHHHHHHHHTTCSEEEEECCC--TTSCHH-----HHHHHHHHHHHTCHHHHT-SC----EEEECSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCC--CCCCHH-----HHHHHHHHHHHHHHHCCC-CC----EEECCCCHHHHHHH
T ss_conf 6799999999999998599989858998--888879-----999999999998651168-87----57247877999999
Q ss_pred CC--CC-CCCHHHHH----HHHHHHHHHHHHCCCCEEECCCCCC-----------CHHHHHHHHHHHCCCC------CCC
Q ss_conf 13--65-44628999----9999999999962897352466767-----------7999999999877885------773
Q gi|255764463|r 144 LC--DG-EIVNDETI----ELISHAAVIQADAGADIIAPSEMMD-----------GRVQEIRKKLDSHGHI------NVG 199 (337)
Q Consensus 144 ~~--~g-~IdND~Tl----~~L~k~Al~~A~AGaDivAPSdMMD-----------GrV~aIR~~Ld~~g~~------~~~ 199 (337)
++ +| .+.||.|- +...+++-.-++.|+-+|+..-=-+ --...+...+.+.|.. +-.
T Consensus 101 L~~~~g~~iINdisg~~~~~~~~~~~~l~~~~~~~vV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~D~i 180 (300)
T 3k13_A 101 LKCLQGKSIVNSISLKEGEEVFLEHARIIKQYGAATVVXAFDEKGQADTAARKIEVCERAYRLLVDKVGFNPHDIIFDPN 180 (300)
T ss_dssp HHHCSSCCEEEEECSTTCHHHHHHHHHHHHHHTCEEEEESEETTEECCSHHHHHHHHHHHHHHHHHHTCCCGGGEEEECC
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEECCC
T ss_conf 99737876766544311578899861775025976532355667789979999999999999999873999899145332
Q ss_pred EECHHHHHHH---------HHHCCHHHHHHCCCCCCC-CCCCCCCCCCHH-HHHHHHHHHHHH--CCCCEEEECCC
Q ss_conf 0033666435---------430101675310244677-774431572114-788988887664--08987995531
Q gi|255764463|r 200 IMPYVAKFNS---------SFYGPYRDAISTRDLLKG-DKKTYYLDPANV-QEAIREASIDIQ--ESADMLLVKPG 262 (337)
Q Consensus 200 ImsYsaKfaS---------~fYgPFRdA~~S~p~~~g-dr~sYQmd~~n~-~eA~~e~~~D~~--EGAD~lMVKPa 262 (337)
|+-=..=|.. .-..-||+.---.|.+.| .|+++-.+..+. ++.+....++.. -|.+..+++|+
T Consensus 181 i~dpg~gf~k~~~~~~~~l~~i~~~~~~~lg~pil~G~Snksf~~~~~~~~~~~~~~~~~~~~t~a~~~~ai~~~~ 256 (300)
T 3k13_A 181 VLAVATGIEEHNNYAVDFIEATGWIRKNLPGAHVSGGVSNLSFSFRGNNYIREAXHAVFLYHAIQQGXDXGIVNPG 256 (300)
T ss_dssp CCCCSSSCGGGTTHHHHHHHHHHHHHHHSTTCEECCBGGGGGGGGTTCHHHHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCHH
T ss_conf 1322157188899999999999999875788627876410005789730778899999999999847863207963
No 170
>>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, symmetric dimer, signaling protein; NMR {Helicobacter pylori J99} (A:1-99)
Probab=39.17 E-value=28 Score=15.93 Aligned_cols=72 Identities=18% Similarity=0.050 Sum_probs=50.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 7744315721147889888876640898799553114589999999624-99899993461899999999888978
Q gi|255764463|r 228 DKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 228 dr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
.+..||.+.++..+...+... +.--|. ++=|.+.=+++++.+|+.. ..|+...--.++-.....+-++|.-|
T Consensus 21 ~~~g~~v~~a~~~~~a~~~~~--~~~~dl-viLp~~~G~~ll~~lr~~~~~~pvI~lt~~~~~~~~~~~~~~Gadd 93 (99)
T 2hqr_A 21 NVKGFMADVTESLEDGEYLMD--IRNYDL-VMVSDKNALSFVSRIKEKHSSIVVLVSSDNPTSEEEVHAFEQGADD 93 (99)
T ss_dssp GGGTCCEEEESSHHHHHHHHT--TSCCSE-EEECCTTHHHHHHHHHHHCTTSEEEEEESSCCHHHHHHHHHHTCSE
T ss_pred HHCCCEEEEECCHHHHHHHHH--HCCCCH-HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 987999999899999999997--369861-1022233211112222222222221233211212222222233332
No 171
>>2hzg_A Mandelate racemase/muconate lactonizing enzyme/enolase superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides} (A:127-348)
Probab=38.88 E-value=28 Score=15.90 Aligned_cols=69 Identities=12% Similarity=0.085 Sum_probs=49.5
Q ss_pred CEEECCCCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEEC
Q ss_conf 811048887-8632889999999999998889367633025633455445421576537999999999730-14479861
Q gi|255764463|r 52 TVESINSMP-DVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI-PNIGIITD 129 (337)
Q Consensus 52 ~k~~I~SMP-Gv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f-pdl~vi~D 129 (337)
.++.|+..- +.+..+.+.+.+.++++.+.|.+.|-|=++.+.. ++. .-..+.++++++.+ |++-|+.|
T Consensus 4 ~r~~i~~~a~~~~~~~p~~~~~~a~~~~~~G~~~iKik~G~~~~-~~~---------~~d~~~i~~ir~~~g~~~~l~vD 73 (222)
T 2hzg_A 4 ASHGKRPYASLLFGDTPQETLERARAARRDGFAAVKFGWGPIGR-GTV---------AADADQIMAAREGLGPDGDLMVD 73 (222)
T ss_dssp CCCCBEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEEESTTTTS-SCH---------HHHHHHHHHHHHHHCSSSEEEEE
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCC-CCH---------HHHHHHHHHHHHHHCCCCEEHHH
T ss_conf 77543322232334657887788888764012301220132367-787---------77677888999884743000233
Q ss_pred C
Q ss_conf 3
Q gi|255764463|r 130 V 130 (337)
Q Consensus 130 V 130 (337)
.
T Consensus 74 ~ 74 (222)
T 2hzg_A 74 V 74 (222)
T ss_dssp C
T ss_pred H
T ss_conf 1
No 172
>>1dqu_A Isocitrate lyase; beta barrel; 2.80A {Emericella nidulans} (A:49-259,A:360-538)
Probab=38.48 E-value=28 Score=15.86 Aligned_cols=193 Identities=14% Similarity=0.132 Sum_probs=97.2
Q ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHCCCC----------------------EEEEEECCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 04888786328899999999999988893----------------------67633025633455445421576537999
Q gi|255764463|r 55 SINSMPDVMRMSIDVAVEKIKQVADLGIP----------------------AIAIFPNIPMDLRNNTGSHIIDPDNLINE 112 (337)
Q Consensus 55 ~I~SMPGv~R~Sid~L~~eie~~~~lGI~----------------------av~LFp~I~~~~Kd~~GseA~n~dglv~r 112 (337)
...++|..-.++.+.++..++.+...-.. ..-+.|.+- + =+.| +....-+.+
T Consensus 60 ~~~G~pDt~~vt~dev~~~v~~I~ra~~~~d~~~~~~~~s~~~~~~~a~~~~~~~~PviA-D--~D~G---~G~~~~v~~ 133 (390)
T 1dqu_A 60 TDEPSPDLADYPMNTVPNKVNHLWMAQLFHDRKQREERMTTPKDQRHKVANVDYLRPIIA-D--ADTG---HGGLTAVMK 133 (390)
T ss_dssp TCCCCSSCSCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHSSCHHHHTTSCCCCCCCCEEE-E--CTTC---SSSHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEE-E--CCCC---CCCHHHHHH
T ss_conf 689889855663013699999999877666789988630231344303455566676588-6--5567---872899999
Q ss_pred HHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHH
Q ss_conf 9999997301447986133271001143100136-544628999999999999996289735246676779999999998
Q gi|255764463|r 113 GICAIKKNIPNIGIITDVALDPFTIHGHDGILCD-GEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLD 191 (337)
Q Consensus 113 AIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~-g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld 191 (337)
.|+.+-+.= =-.|.... ..|...+||.... ..+.-++.+..|...+...-++|+|.|-
T Consensus 134 ~vk~lveaG-iagV~iED---gl~p~k~~g~~g~k~lv~~~E~~~rI~aa~~A~d~~G~d~iV----------------- 192 (390)
T 1dqu_A 134 LTKLFVERG-AAGIHIED---QAPGTKKCGHMAGKVLVPISEHINRLVAIRAQADIMGTDLLA----------------- 192 (390)
T ss_dssp HHHHHHHTT-CSEEEECS---BCTTCC------CEEECCHHHHHHHHHHHHHHHHHTTCCCEE-----------------
T ss_pred HHHHHHHCC-CCEEEEEC---CCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCEE-----------------
T ss_conf 999999758-70887400---267776667899957627999999999999999735998258-----------------
Q ss_pred HCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH
Q ss_conf 77885773003366643543010167531024467777-44315721147889888876640898799553114589999
Q gi|255764463|r 192 SHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDK-KTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCF 270 (337)
Q Consensus 192 ~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr-~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~ 270 (337)
+.- =-+..-+.+-+++.-+-.- --+ --|+. ++.-+...+-.+-..-+||+|-+.-..|-|+.++
T Consensus 193 ---------iAR---TDa~la~~iteaIdRad~~-r~~eg~y~~--~~g~~~~i~r~~a~ap~adl~w~et~~p~~~~a~ 257 (390)
T 1dqu_A 193 ---------IAR---TDSEAATLITSTIDHREAP-RTREGYYRY--QGGTQCAINRAVAYAPFADLIWMESKLPDYKQAK 257 (390)
T ss_dssp ---------EEE---CCGGGEEEESCTTCGGTSS-CCTTCCEEE--CCSHHHHHHHHHHHTTSCSEEECCCSSCCHHHHH
T ss_pred ---------EEE---ECHHHCCCCCCCCCCCCCC-CCCCCCEEE--CCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHH
T ss_conf ---------974---0122204543445622888-786643022--5852999999984187777777607999999999
Q ss_pred H----HHHHCCCCEEEEECCHHH
Q ss_conf 9----996249989999346189
Q gi|255764463|r 271 R----IKEKFGLPTFAYQVSGEY 289 (337)
Q Consensus 271 ~----~k~~~~~P~~aYqVSGEY 289 (337)
+ |++.++--+.||+-|.-|
T Consensus 258 ~f~~~i~~~~p~~~l~yn~spsf 280 (390)
T 1dqu_A 258 EFADGVHAVWPEQKLAYNLSPSF 280 (390)
T ss_dssp HHHHHHHHHCTTCEEEEECCSSS
T ss_pred HHHHHHHHHCCCCEEEECCCCCC
T ss_conf 99999998789964664489877
No 173
>>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} (A:128-148,A:188-550)
Probab=38.33 E-value=28 Score=15.96 Aligned_cols=68 Identities=15% Similarity=0.183 Sum_probs=42.7
Q ss_pred CHHHHHHHHHHHHH-CCCCEEEEEECCCCCCCCCCCC---CCCCCC-C---HHHHHHHHHHHHHC--CCEEEECCCCC
Q ss_conf 89999999999998-8893676330256334554454---215765-3---79999999997301--44798613327
Q gi|255764463|r 66 SIDVAVEKIKQVAD-LGIPAIAIFPNIPMDLRNNTGS---HIIDPD-N---LINEGICAIKKNIP--NIGIITDVALD 133 (337)
Q Consensus 66 Sid~L~~eie~~~~-lGI~av~LFp~I~~~~Kd~~Gs---eA~n~d-g---lv~rAIr~IK~~fp--dl~vi~DVcLc 133 (337)
.+..+.+.+..+.+ ||+++|-|-|..+......... .+.||. | =..+-|+++.++-- .|-||.|+++-
T Consensus 23 ~~~gi~~~L~yLk~~LGvt~V~L~Pi~~~~~~~gY~~~d~~~id~~~G~~~dfk~lv~~~h~~G~~~gi~VilD~V~N 100 (384)
T 1ji1_A 23 DLAGIDQKLGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDGVFN 100 (384)
T ss_dssp CHHHHHHTHHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 899999754278766798889979887388988958244767584559999999999999985364673899831467
No 174
>>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} (A:145-307)
Probab=38.31 E-value=29 Score=15.84 Aligned_cols=101 Identities=19% Similarity=0.116 Sum_probs=66.7
Q ss_pred HHHHHHHHHHCCHHHH--------HHCC--CC-CCCCCCCCCCCCCHHHHHHHHHHHHHHC--CCCEEEECC-CHHHHHH
Q ss_conf 3666435430101675--------3102--44-6777744315721147889888876640--898799553-1145899
Q gi|255764463|r 203 YVAKFNSSFYGPYRDA--------ISTR--DL-LKGDKKTYYLDPANVQEAIREASIDIQE--SADMLLVKP-GLPYLDV 268 (337)
Q Consensus 203 YsaKfaS~fYgPFRdA--------~~S~--p~-~~gdr~sYQmd~~n~~eA~~e~~~D~~E--GAD~lMVKP-a~~yLDi 268 (337)
|+.=..+.|||+|=.- .... +. ..||.+.--.++.+-.+++.++..+-+. |.-++.+-| ..++.|+
T Consensus 3 ~tilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~~~~~~~~~t~~ei 82 (163)
T 2gas_A 3 YTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKNYLTQNEV 82 (163)
T ss_dssp BEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGGTTEEEECCCGGGEEEHHHH
T ss_pred EEEECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCEEEEECCCCCCCHHHH
T ss_conf 16740126765266415666554210144323564234456215999999999984690112957999789888779999
Q ss_pred HHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHH
Q ss_conf 999996249989999346189999999988897889
Q gi|255764463|r 269 CFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKN 304 (337)
Q Consensus 269 i~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~ 304 (337)
+..+.+.++.|+-..++|-|-.. ..+...++.+..
T Consensus 83 ~~~~~~~~g~~~~~~~i~~~~~~-~~~~~~~~~~~~ 117 (163)
T 2gas_A 83 IALWEKKIGKTLEKTYVSEEQVL-KDIQESSFPHNY 117 (163)
T ss_dssp HHHHHHHHTSCCEEEEECHHHHH-HHHHHBCTTHHH
T ss_pred HHHHHHHHCCCCCEEECCHHHHH-HHHHHCCCCHHH
T ss_conf 99999997898728988999999-998865796668
No 175
>>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel; HET: U5P; 2.40A {Bacillus subtilis} (A:)
Probab=37.95 E-value=29 Score=15.80 Aligned_cols=180 Identities=11% Similarity=0.019 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCC----------C-CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC
Q ss_conf 999999999730144798613327100114310013----------6-54462899999999999999628973524667
Q gi|255764463|r 110 INEGICAIKKNIPNIGIITDVALDPFTIHGHDGILC----------D-GEIVNDETIELISHAAVIQADAGADIIAPSEM 178 (337)
Q Consensus 110 v~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~----------~-g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdM 178 (337)
...+++.+++.-+.+ .+-|.-++++...|..+|-. + ..-|-+.|.... +-.++++|||+|.-.--
T Consensus 15 l~~~l~~i~~~~~~v-d~~~~g~~~~~~~G~~~i~~L~~~~~~~~~d~k~~di~~~~~~~---~~~~~~~gad~itvh~~ 90 (239)
T 1dbt_A 15 AEETLAFLAPFQQEP-LFVKVGMELFYQEGPSIVKQLKERNCELFLDLKLHDIPTTVNKA---MKRLASLGVDLVNVHAA 90 (239)
T ss_dssp HHHHHHHTGGGTTSC-CEEEECHHHHHHHTHHHHHHHHHTTCEEEEEEEECSCHHHHHHH---HHHHHTTTCSEEEEEGG
T ss_pred HHHHHHHHHHCCCCC-CEEEECHHHHHHCCHHHHHHHHHHCHHHHHHHHHCCCCHHHHHH---HHHHHCCCCCEEEEECC
T ss_conf 999999999708755-19998999985249799999875042200001433587067778---77653136546776245
Q ss_pred C-CCHHHHHHHHHHHCCC---CCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHCC
Q ss_conf 6-7799999999987788---5773003366643543010167531024467777443157211-478898888766408
Q gi|255764463|r 179 M-DGRVQEIRKKLDSHGH---INVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPAN-VQEAIREASIDIQES 253 (337)
Q Consensus 179 M-DGrV~aIR~~Ld~~g~---~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n-~~eA~~e~~~D~~EG 253 (337)
+ +..+..+.+..+.... .....+.-.+ .+.+.. -+-.....+..+ .++.++-+..-..-|
T Consensus 91 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--------------~~~~~~-~~~~~~~~~~~~~~d~v~~~a~~~~~~g 155 (239)
T 1dbt_A 91 GGKKMMQAALEGLEEGTPAGKKRPSLIAVTQ--------------LTSTSE-QIMKDELLIEKSLIDTVVHYSKQAEESG 155 (239)
T ss_dssp GCHHHHHHHHHHHHHHSCTTSCCCEEEEECS--------------CTTCCH-HHHHHTSCBCSCHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCEEEEEEE--------------CCCCCH-HHHHHHHHHCCCCCCEEEHHHHHHHHCC
T ss_conf 6548899999876530100245650688750--------------256445-7898753212554303308776566439
Q ss_pred CCEEEECCCHHHHHHHHHHHHHCC-CCEEE--EECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 987995531145899999996249-98999--934618999999998889788999999999997726999982
Q gi|255764463|r 254 ADMLLVKPGLPYLDVCFRIKEKFG-LPTFA--YQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFT 324 (337)
Q Consensus 254 AD~lMVKPa~~yLDii~~~k~~~~-~P~~a--YqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~Iit 324 (337)
++++-.-|. -++.+++... .+... ...+.- ....|..+ .++.....++|||+|+.
T Consensus 156 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~------~~~~gg~~-----~~~~~~~~~~Gad~ivv 213 (239)
T 1dbt_A 156 LDGVVCSVH-----EAKAIYQAVSPSFLTVTPGIRMSE------DAANDQVR-----VATPAIAREKGSSAIVV 213 (239)
T ss_dssp CSEEECCGG-----GHHHHTTTSCTTCEEEECCBCCTT------SCCTTCSS-----CBCHHHHHHTTCSEEEE
T ss_pred CCEEECCCH-----HHHHHHCCCCCCEEEEEECCCCCC------CCCCCCEE-----ECCHHHHHHCCCCEEEE
T ss_conf 633321203-----444320013341125654232367------77799654-----47999999879999998
No 176
>>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, RAW starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii h 168} PDB: 3bcd_A* 3bcf_A (A:117-231,A:323-505)
Probab=37.68 E-value=29 Score=15.78 Aligned_cols=125 Identities=11% Similarity=0.079 Sum_probs=84.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC--CC--C-----------CCCCCCCCC-CH---HHHHHHHHH
Q ss_conf 88786328899999999999988893676330256334--55--4-----------454215765-37---999999999
Q gi|255764463|r 58 SMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDL--RN--N-----------TGSHIIDPD-NL---INEGICAIK 118 (337)
Q Consensus 58 SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~--Kd--~-----------~GseA~n~d-gl---v~rAIr~IK 118 (337)
...+-.+-+...+.+.+..+.++|+.+|-|-|+.+... .+ . .+..+.++. |- ....|+++.
T Consensus 24 ~~~~~~~g~~~~~~~~l~~l~~lG~~~i~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lv~~~h 103 (298)
T 3bc9_A 24 TEHPEEANLWNLLAERAPELAEAGFTAVWLPPANKGMAGIHDVGYGTYDLWDLGEFDQKGTVRTKYGTKGELENAIDALH 103 (298)
T ss_dssp HHCGGGGGHHHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 55676572899999979999975998899180603879999999770567026665556763889999999999999999
Q ss_pred HHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-CCCCEE---ECCCCCCCHHHHHHHHHHHCC
Q ss_conf 7301447986133271001143100136544628999999999999996-289735---246676779999999998778
Q gi|255764463|r 119 KNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQAD-AGADII---APSEMMDGRVQEIRKKLDSHG 194 (337)
Q Consensus 119 ~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~-AGaDiv---APSdMMDGrV~aIR~~Ld~~g 194 (337)
+. .|.||.|+ .++|.+..+.+.+...-..+ .|+|-. +..-|=.+-+..+.+.+.+.+
T Consensus 104 ~~--gi~vi~D~-----------------V~~np~V~~~i~~~~~~Wi~~~GVDGfR~Daa~~~~~~~~~~~~~~~~~~~ 164 (298)
T 3bc9_A 104 NN--DIKVYFDA-----------------VLENEAVQNDVIDWGQWIINNIDFDGFRLDAVKHIDYRFIDKWMSAVQNSS 164 (298)
T ss_dssp HT--TCEEEEEE-----------------CCTCHHHHHHHHHHHHHHHHTTCCCEEEETTGGGSCHHHHHHHHHHHHHTC
T ss_pred HC--CCEEEEEE-----------------CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 87--99899998-----------------648888989997779998876076355454444301677899999998620
Q ss_pred CCCCCEE
Q ss_conf 8577300
Q gi|255764463|r 195 HINVGIM 201 (337)
Q Consensus 195 ~~~~~Im 201 (337)
..+.-++
T Consensus 165 ~~~~~~~ 171 (298)
T 3bc9_A 165 NRDVFFV 171 (298)
T ss_dssp SSCCEEE
T ss_pred CCCEEEE
T ss_conf 7974999
No 177
>>2qde_A Mandelate racemase/muconate lactonizing enzyme family protein; PSI-II, NYSGXRC, enolase, structural genomics, protein structure initiative, PSI-2; 1.93A {Azoarcus SP} (A:127-364)
Probab=37.53 E-value=29 Score=15.76 Aligned_cols=65 Identities=12% Similarity=0.188 Sum_probs=46.9
Q ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEECC
Q ss_conf 8110488878632889999999999998889367633025633455445421576537999999999730-144798613
Q gi|255764463|r 52 TVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI-PNIGIITDV 130 (337)
Q Consensus 52 ~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f-pdl~vi~DV 130 (337)
.++.|+.-=-+.-.+.+.++++++++.+.|.+.|-+-++.+.. .|. ..++++++.+ |++.++.|.
T Consensus 5 ~r~~v~~~~~~~~~~~e~~~~~~~~~~~~G~~~~Kik~g~~~~-~d~-------------~~~~~~r~~~g~~~~l~iDa 70 (238)
T 2qde_A 5 TIERIPLGLVLGAGEPEAVAEEALAVLREGFHFVKLKAGGPLK-ADI-------------AMVAEVRRAVGDDVDLFIDI 70 (238)
T ss_dssp SCSSEEBCEECCCSCHHHHHHHHHHHHHHTCSCEEEECCSCHH-HHH-------------HHHHHHHHHHCTTSCEEEEC
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HHH-------------HHHHHHHHHCCCCCEEEECC
T ss_conf 4202432101222220002222111013575422233357504-688-------------99999875139974899235
No 178
>>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A* (A:)
Probab=37.27 E-value=30 Score=15.73 Aligned_cols=89 Identities=17% Similarity=0.126 Sum_probs=57.3
Q ss_pred HHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCC---------------CC-CCCCHHHHHHHHHHHHHHHHHCCCCEEEC
Q ss_conf 999999973014479861332710011431001---------------36-54462899999999999999628973524
Q gi|255764463|r 112 EGICAIKKNIPNIGIITDVALDPFTIHGHDGIL---------------CD-GEIVNDETIELISHAAVIQADAGADIIAP 175 (337)
Q Consensus 112 rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~---------------~~-g~IdND~Tl~~L~k~Al~~A~AGaDivAP 175 (337)
++++.+++.- +.+.+.|+-+.+|.+.|-.++- -| ..-|-..|+...++....++.+|||+|.-
T Consensus 43 ~~~~~i~~~~-~~v~~~k~~~~~~~~~G~~~i~~l~~~~~~~~d~~ii~D~k~~DIg~t~~~~~~~~~~~~~~gaD~itv 121 (267)
T 3gdm_A 43 ELLELVEALG-PKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLFEDRRFADIGNTVKLQYSAGVYRIAEWADITNA 121 (267)
T ss_dssp HHHHHHHHHG-GGCSEEEECGGGCSSCCTTTTHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHHHSTTTCHHHHCSEEEE
T ss_pred HHHHHHHHHC-CCCEEEEECHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 9999999838-831699988899753488999999999987459468646430587678999999999876346608984
Q ss_pred CCCCC-CHHHHHHHHHHHCCCCCCCEE
Q ss_conf 66767-799999999987788577300
Q gi|255764463|r 176 SEMMD-GRVQEIRKKLDSHGHINVGIM 201 (337)
Q Consensus 176 SdMMD-GrV~aIR~~Ld~~g~~~~~Im 201 (337)
.--|. ..+....+..+++|-.-..++
T Consensus 122 h~~~g~~~l~~~~~~~~~~~~~~~~~l 148 (267)
T 3gdm_A 122 HGVVGPGIVSGLKQAAEEVTKEPRGLL 148 (267)
T ss_dssp EGGGCTHHHHHHHHHHHHHCCSCCEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 165503579999999863388764368
No 179
>>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixation regulation; HET: 15P; 1.60A {Rhizobium meliloti} (A:)
Probab=37.01 E-value=30 Score=15.71 Aligned_cols=70 Identities=11% Similarity=0.201 Sum_probs=51.3
Q ss_pred CCCCCCCCH-HHHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 443157211-478898888766408987995---53114589999999624-99899993461899999999888978
Q gi|255764463|r 230 KTYYLDPAN-VQEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 230 ~sYQmd~~n-~~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
..|+...++ ..+|+.... ++.-|.+.+ =|++.-+++++.+|+.. ..|+...--.|.-.....|.+.|..|
T Consensus 26 ~g~~v~~~~~~~~al~~l~---~~~~d~vilD~~lp~~~G~~~~~~ir~~~~~~piI~lt~~~~~~~~~~a~~~Ga~d 100 (126)
T 1dbw_A 26 NGFAVKMHQSAEAFLAFAP---DVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVD 100 (126)
T ss_dssp TTCEEEEESCHHHHHHHGG---GCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSE
T ss_pred CCCEEEEECCHHHHHHHHH---CCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHCCCCE
T ss_conf 7999999768799999976---06887999872187430158999998249887499998589999999999879988
No 180
>>1s8n_A Putative antiterminator; structural genomics, transcriptional antiterminator, two component system, PSI; 1.48A {Mycobacterium tuberculosis H37RV} (A:1-143)
Probab=36.99 E-value=26 Score=16.07 Aligned_cols=68 Identities=21% Similarity=0.251 Sum_probs=53.4
Q ss_pred CC-CCCC-HHHHHHHHHHHHHHCCCCEEEEC---CCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 31-5721-14788988887664089879955---311458999999962499899993461899999999888978
Q gi|255764463|r 232 YY-LDPA-NVQEAIREASIDIQESADMLLVK---PGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 232 YQ-md~~-n~~eA~~e~~~D~~EGAD~lMVK---Pa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
|+ .+.+ |..||+.-.. ++--|++.+- |+|.-+++++.+++....|+...-.+++......+.+.|..+
T Consensus 38 ~~vv~~a~~~~eal~~l~---~~~~DliilD~~lP~~dG~el~~~lr~~~~~pii~lt~~~~~~~~~~a~~~G~~~ 110 (143)
T 1s8n_A 38 YEIVGEAGDGQEAVELAE---LHKPDLVIMDVKMPRRDGIDAASEIASKRIAPIVVLTAFSQRDLVERARDAGAMA 110 (143)
T ss_dssp CEEEEEESSHHHHHHHHH---HHCCSEEEEESSCSSSCHHHHHHHHHHTTCSCEEEEEEGGGHHHHHTTGGGSCEE
T ss_pred CEEEEEECCHHHHHHHHH---HCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCE
T ss_conf 979999899999999998---3799999996404586079999999856999989995678899999999829842
No 181
>>3fem_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, synthase, biosynthetic protein, transferase; 3.02A {Saccharomyces cerevisiae} (A:)
Probab=36.98 E-value=30 Score=15.70 Aligned_cols=183 Identities=15% Similarity=0.080 Sum_probs=83.5
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCC----CHHHCCCCCCCCC
Q ss_conf 9999999988893676330256334554454215765379999999997301-4479861332----7100114310013
Q gi|255764463|r 71 VEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVAL----DPFTIHGHDGILC 145 (337)
Q Consensus 71 ~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcL----c~YT~hGHcGi~~ 145 (337)
.+......+.|...++..+.+..+.+...+. ..-...+.|+.+|+... -+.-..|+-. .--+..|.|++..
T Consensus 27 ~~~a~~~e~aG~~~i~~h~rt~a~~~~~~~~----~~~~~~~~Ik~ik~~~~ipIig~~~~~~~~~~~~i~~t~~D~v~~ 102 (297)
T 3fem_A 27 PEQAKIAEKSGACAVMALESIPADMRKSGKV----CRMSDPKMIKDIMNSVSIPVMAKVRIGHFVEAQIIEALEVDYIDE 102 (297)
T ss_dssp HHHHHHHHTTTCSEEEECSSCHHHHTTSCSC----CCCCCHHHHHHHHTSCSSCEEEEECTTCHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHCCCEEEEEECCCCHHHHHCCCC----CCCCCHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 9999988861753787543575878734681----105887999999862655231234335199998898719997641
Q ss_pred -CCC--------CCHHHHH------HHHHHHHHHHHHCCCCEEECCCC--CCCHHHHHHHH--HHHCCCCCCCEECH--H
Q ss_conf -654--------4628999------99999999999628973524667--67799999999--98778857730033--6
Q gi|255764463|r 146 -DGE--------IVNDETI------ELISHAAVIQADAGADIIAPSEM--MDGRVQEIRKK--LDSHGHINVGIMPY--V 204 (337)
Q Consensus 146 -~g~--------IdND~Tl------~~L~k~Al~~A~AGaDivAPSdM--MDGrV~aIR~~--Ld~~g~~~~~ImsY--s 204 (337)
.+. +-.+.+. ..-...++..+..|+|.+..-.. ..+.+...+.. +.+.||.-.+.-.+ .
T Consensus 103 ~r~~~~~p~~~~~~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~g~~~~~~~~~~~~ 182 (297)
T 3fem_A 103 SEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDI 182 (297)
T ss_dssp CTTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCTTTTCHHHHHHHHHHHHHHHHHHHTCCCHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 02577676012553103777744168973999998862153224679899856999999999999999999708925689
Q ss_pred HHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHH----HHHHHHHHHHCCCCEEEECCCHH
Q ss_conf 6643543010167531024467777443157211478----89888876640898799553114
Q gi|255764463|r 205 AKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQE----AIREASIDIQESADMLLVKPGLP 264 (337)
Q Consensus 205 aKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~e----A~~e~~~D~~EGAD~lMVKPa~~ 264 (337)
......+...+.....- ...++.+.----| ---++..-.+-|||-|.|=-+.+
T Consensus 183 ~~~~~~~~~~~~~~~~~-------~~~~~~~ipViaeGgI~tp~da~~a~~lGA~aV~vgtaI~ 239 (297)
T 3fem_A 183 AKVAEEMRVPVSLLKDV-------LEKGKLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIF 239 (297)
T ss_dssp HHHHHHTTCCHHHHHHH-------HHHTSCSSEEEBCSSCCSHHHHHHHHHTTCSCEECCSSST
T ss_pred HHHHHHHCCCHHHHHHH-------HHHCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCC
T ss_conf 99999868879999999-------9968988467546885883779999972898798666524
No 182
>>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12} (A:)
Probab=36.68 E-value=30 Score=15.67 Aligned_cols=72 Identities=15% Similarity=0.047 Sum_probs=51.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHH---HHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 7443157211478898888766408987995531145---89999999624-99899993461899999999888978
Q gi|255764463|r 229 KKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPY---LDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 229 r~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~y---LDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
+..|+....+..+...+... ++-=|.+++-..||. +++++.+++.. ++|+.++-..+.......+.+.|..+
T Consensus 29 ~~g~~v~~~~~~~~al~~l~--~~~~dliilD~~lp~~~G~el~~~ir~~~~~~piI~lt~~~~~~~~~~a~~~G~~~ 104 (130)
T 3eod_A 29 SLGATTVLAADGVDALELLG--GFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVED 104 (130)
T ss_dssp HTTCEEEEESCHHHHHHHHT--TCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSE
T ss_pred HCCCEEEEECCHHHHHHHHH--CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCE
T ss_conf 87999999722777899985--35667565101369998789999999838999699980899999999999879988
No 183
>>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2; 2.10A {Herpetosiphon aurantiacus atcc 23779} (A:136-299)
Probab=36.55 E-value=30 Score=15.66 Aligned_cols=52 Identities=19% Similarity=0.068 Sum_probs=38.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 89999999999998889367633025633455445421576537999999999730144798613
Q gi|255764463|r 66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDV 130 (337)
Q Consensus 66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DV 130 (337)
+.+.+.++++++.+.|.+.|-+-.+.+.... ..+.++.+++..|++-++.|.
T Consensus 8 ~~e~~~~~~~~~~~~G~~~~Kikig~~~~~~-------------~~~~~~~~~~~g~~~~i~~Da 59 (164)
T 3ik4_A 8 DEVHAAASAKAILARGIKSIKVKTAGVDVAY-------------DLARLRAIHQAAPTAPLIVDG 59 (164)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCSSCHHH-------------HHHHHHHHHHHSSSCCEEEEC
T ss_pred CCCCCCHHHHHHHHCCCCCCCCCCCCCHHHH-------------HHHHHHHCCCCCCHHHHHHHH
T ss_conf 6332102345554313222210001103655-------------211233202446157777665
No 184
>>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima} (A:)
Probab=36.30 E-value=31 Score=15.63 Aligned_cols=71 Identities=23% Similarity=0.238 Sum_probs=55.1
Q ss_pred CCCCCCCCCH-HHHHHHHHHHHHHCCCCEEEE--CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 7443157211-478898888766408987995--53114589999999624-99899993461899999999888978
Q gi|255764463|r 229 KKTYYLDPAN-VQEAIREASIDIQESADMLLV--KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 229 r~sYQmd~~n-~~eA~~e~~~D~~EGAD~lMV--KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
+..|+...+. ..||+.... ++--|++.+ -|++-=+++++++|+.. ..|+...--.++-.....|-+.|.-|
T Consensus 26 ~~g~~v~~a~~g~eAl~~~~---~~~~dliilD~mp~~dG~e~~~~ir~~~~~~pii~lT~~~~~~~~~~a~~~Ga~d 100 (142)
T 2qxy_A 26 KDGFNVIWAKNEQEAFTFLR---REKIDLVFVDVFEGEESLNLIRRIREEFPDTKVAVLSAYVDKDLIINSVKAGAVD 100 (142)
T ss_dssp GGTCEEEEESSHHHHHHHHT---TSCCSEEEEECTTTHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHHHTCSC
T ss_pred HCCCEEEEECCHHHHHHHHH---HCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCE
T ss_conf 87999999765799999998---3188899723577504999999999978999789997458889999999869988
No 185
>>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii} (A:1-101,A:213-226)
Probab=36.22 E-value=31 Score=15.63 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEE-CCCCCCCHHHHHHHH
Q ss_conf 89999999999999962897352-466767799999999
Q gi|255764463|r 152 DETIELISHAAVIQADAGADIIA-PSEMMDGRVQEIRKK 189 (337)
Q Consensus 152 D~Tl~~L~k~Al~~A~AGaDivA-PSdMMDGrV~aIR~~ 189 (337)
+.-.+.|.+.+..++++|||+++ |+--+-=-...|++.
T Consensus 56 ~~~~~~L~~~~~~Le~aGad~ivi~cNTaH~~~d~i~~~ 94 (115)
T 2zsk_A 56 EGRKKILINAAKALERAGAELIAFAANTPHLVFDDVQRE 94 (115)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEESSSGGGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHH
T ss_conf 238899999999984469888999451778539999986
No 186
>>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase; carbon dioxide fixation, cobalamin; 2.20A {Moorella thermoacetica atcc 39073} (A:)
Probab=36.22 E-value=31 Score=15.63 Aligned_cols=187 Identities=11% Similarity=0.067 Sum_probs=102.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCC
Q ss_conf 28899999999999988893676330256334554454215765379999999997301447986133271001143100
Q gi|255764463|r 64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGI 143 (337)
Q Consensus 64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi 143 (337)
..+.+.+++.+++..+.|-.-+-+-+.... -+ +.--..|.+..+++.. ++-| ++|.|...=.---
T Consensus 21 ~~~~~~~~~~a~~~~~~GA~iIDi~~~~~~--~~--------~~ee~~~~i~~v~~~~-~~pi----siDs~~~~v~~aa 85 (262)
T 1f6y_A 21 ERDPAPVQEWARRQEEGGARALDLNVGPAV--QD--------KVSAMEWLVEVTQEVS-NLTL----CLDSTNIKAIEAG 85 (262)
T ss_dssp HTCHHHHHHHHHHHHHHTCSEEEEBCC------C--------HHHHHHHHHHHHHTTC-CSEE----EEECSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCC--CC--------HHHHHHHHHHHHHHHC-CCCE----EECCCCHHHHHHH
T ss_conf 689999999999999879999997999988--89--------9999999999999970-8986----7448989999999
Q ss_pred CC--CC-CCCHHHH--HHHHHHHHHHHHHCCCCEEECCCCCCC-------H---HHHHHHHHHHCCCC------CCCEEC
Q ss_conf 13--65-4462899--999999999999628973524667677-------9---99999999877885------773003
Q gi|255764463|r 144 LC--DG-EIVNDET--IELISHAAVIQADAGADIIAPSEMMDG-------R---VQEIRKKLDSHGHI------NVGIMP 202 (337)
Q Consensus 144 ~~--~g-~IdND~T--l~~L~k~Al~~A~AGaDivAPSdMMDG-------r---V~aIR~~Ld~~g~~------~~~Ims 202 (337)
++ .| .+.||.| -+-.-+++..-++.|+-+|.-..=.++ + ...+=+.+.+.|.. |.++..
T Consensus 86 l~~~~g~~iINsvs~~~~~~~~~~~l~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Gi~~~~iiiDP~i~~ 165 (262)
T 1f6y_A 86 LKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYIDPLILP 165 (262)
T ss_dssp HHHCSSCEEEEEECSCHHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCC
T ss_pred HHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCC
T ss_conf 98669991998466665556999999997499999972589998888999999999999999983998777998188763
Q ss_pred HHHHHHHHHHC--CHHHHHH----CCCCCCC-CCCCCCCCCCHHHH-HHHHHHHHHHCCCCEEEECCCHHH
Q ss_conf 36664354301--0167531----0244677-77443157211478-898888766408987995531145
Q gi|255764463|r 203 YVAKFNSSFYG--PYRDAIS----TRDLLKG-DKKTYYLDPANVQE-AIREASIDIQESADMLLVKPGLPY 265 (337)
Q Consensus 203 YsaKfaS~fYg--PFRdA~~----S~p~~~g-dr~sYQmd~~n~~e-A~~e~~~D~~EGAD~lMVKPa~~y 265 (337)
=.....++++. -.|..-. -.|.+.| .|+|+.++++.+.. ++.....-..-|++++-+-.--++
T Consensus 166 ~~~~~~~~~~~~~~i~~i~~~~~~g~pi~~g~Sn~sf~~~~~~~~~~t~~~~a~~~~~g~~Iir~h~v~~~ 236 (262)
T 1f6y_A 166 ANVAQDHAPEVLKTLQQIKMLADPAPKTVLGLSNVSQNCQNRPLINRTFLAMAMACGLMSAIADACDEALI 236 (262)
T ss_dssp TTTCTTHHHHHHHHHHHHHTCCSSCCEEEEEGGGGGTTCSSHHHHHHHHHHHHHHTTCCEEEECTTCHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHH
T ss_conf 45422679999999999999870799879983277589962045689999999985899543576769999
No 187
>>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} (A:)
Probab=36.07 E-value=31 Score=15.61 Aligned_cols=116 Identities=16% Similarity=0.200 Sum_probs=77.8
Q ss_pred CCCCCCCCCCCHHH---HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE----
Q ss_conf 48887863288999---99999999988893676330256334554454215765379999999997301447986----
Q gi|255764463|r 56 INSMPDVMRMSIDV---AVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIIT---- 128 (337)
Q Consensus 56 I~SMPGv~R~Sid~---L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~---- 128 (337)
|.-=+|-|.||-++ +.+.++.+.++|...| .||...++. + .| -.+.+.+-+....+-+.-
T Consensus 58 IRPR~gdF~Ys~~E~~~M~~di~~~~~~GadGv-VfG~L~~dg-----~--iD-----~~~~~~Li~~a~~~~vTFHRAf 124 (256)
T 1twd_A 58 IRPRGGDFCYSDGEFAAILEDVRTVRELGFPGL-VTGVLDVDG-----N--VD-----XPRXEKIXAAAGPLAVTFHRAF 124 (256)
T ss_dssp CCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEE-EECCBCTTS-----S--BC-----HHHHHHHHHHHTTSEEEECGGG
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE-EEEEECCCC-----C--CC-----HHHHHHHHHHHCCCCEEEEEHH
T ss_conf 833799887898999999999999998599813-786788888-----8--54-----9999999998644673661123
Q ss_pred CCCCCHHH------CCCCCCCCCCC----CCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHH
Q ss_conf 13327100------11431001365----446289999999999999962897352466767799999999
Q gi|255764463|r 129 DVALDPFT------IHGHDGILCDG----EIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKK 189 (337)
Q Consensus 129 DVcLc~YT------~hGHcGi~~~g----~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~ 189 (337)
|.|-|++. ..|-+.|+.-| -.++=+++..|.++| .|--+++.++---.-|..|.+.
T Consensus 125 D~~~d~~~al~~L~~lG~~rVLTSGg~~~a~~g~~~L~~L~~~a-----~~~iii~GgGv~~~nv~~l~~t 190 (256)
T 1twd_A 125 DXCANPLYTLNNLAELGIARVLTSGQKSDALQGLSKIXELIAHR-----DAPIIXAGAGVRAENLHHFLDA 190 (256)
T ss_dssp GGCSCHHHHHHHHHHHTCCEEEECTTSSSTTTTHHHHHHHHTSS-----SCCEEEEESSCCTTTHHHHHHH
T ss_pred HHCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHC-----CCCEEEEECCCCHHHHHHHHHC
T ss_conf 54088999999998669786862689885566799999999835-----9958996267898999999977
No 188
>>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A (A:)
Probab=35.78 E-value=31 Score=15.58 Aligned_cols=30 Identities=17% Similarity=0.111 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCC
Q ss_conf 999999999998889367633025633455
Q gi|255764463|r 68 DVAVEKIKQVADLGIPAIAIFPNIPMDLRN 97 (337)
Q Consensus 68 d~L~~eie~~~~lGI~av~LFp~I~~~~Kd 97 (337)
+.+.+.++++.+.|+.+|++-|..-...++
T Consensus 45 ~~i~~~~~~a~~~~~~ai~v~~~~~~~~~~ 74 (273)
T 2qjg_A 45 IDIRKTVNDVAEGGANAVLLHKGIVRHGHR 74 (273)
T ss_dssp SSHHHHHHHHHHHTCSEEEECHHHHHSCCC
T ss_pred CCHHHHHHHHHHCCCCEEEECCCHHHHHCC
T ss_conf 599999999985489889955736865053
No 189
>>3f6c_A Positive transcription regulator EVGA; structural genomics, , PSI-2, protein structure initiative; 1.45A {Escherichia coli k-12} (A:)
Probab=35.73 E-value=31 Score=15.57 Aligned_cols=69 Identities=10% Similarity=0.103 Sum_probs=54.4
Q ss_pred CCCC-C-CCHHHHHHHHHHHHHHCCCCEEEEC---CCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 4315-7-2114788988887664089879955---3114589999999624-99899993461899999999888978
Q gi|255764463|r 231 TYYL-D-PANVQEAIREASIDIQESADMLLVK---PGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 231 sYQm-d-~~n~~eA~~e~~~D~~EGAD~lMVK---Pa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
.|+. . ..|..||+.... ++--|++++- |++.-+++++.+++.. ..|+..+.-.++-.-...+-+.|..+
T Consensus 25 ~~~v~~~a~~~~eal~~~~---~~~pDiiilD~~lP~~~G~el~~~i~~~~~~~~iiils~~~~~~~~~~a~~~Ga~~ 99 (134)
T 3f6c_A 25 DIEILAELTEGGSAVQRVE---TLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANG 99 (134)
T ss_dssp TEEEEEEESSSTTHHHHHH---HHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSE
T ss_pred CCEEEEEECCHHHHHHHHH---CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCE
T ss_conf 9989999899999999997---06998999959999997699999999749998199996889999999999879989
No 190
>>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* (A:1-101,A:168-240,A:343-460)
Probab=35.67 E-value=31 Score=15.57 Aligned_cols=69 Identities=17% Similarity=0.166 Sum_probs=44.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC----CCCCCCCCC-CHHHHHHHHHHHHHC-CCEEEECCCC
Q ss_conf 28899999999999988893676330256334554----454215765-379999999997301-4479861332
Q gi|255764463|r 64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNN----TGSHIIDPD-NLINEGICAIKKNIP-NIGIITDVAL 132 (337)
Q Consensus 64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~----~GseA~n~d-glv~rAIr~IK~~fp-dl~vi~DVcL 132 (337)
--....+.+.+..+.++|+++|-|=|..+....+. .--.+.|+. |-...--+.|++.-. .|.||.|+.+
T Consensus 27 ~g~~~gi~~~l~yl~~lGv~~i~l~Pi~~~~~~~~gY~~~d~~~id~~~Gt~~df~~li~~~h~~Gi~vilD~V~ 101 (292)
T 2zic_A 27 IGDLKGITSKLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLVV 101 (292)
T ss_dssp SCCHHHHHHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 669999998348999749988997976058988999685567876735699999999999999888989999684
No 191
>>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver domain, target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405} (A:)
Probab=35.30 E-value=32 Score=15.53 Aligned_cols=74 Identities=15% Similarity=0.084 Sum_probs=56.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEC---CCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 74431572114788988887664089879955---3114589999999624-99899993461899999999888978
Q gi|255764463|r 229 KKTYYLDPANVQEAIREASIDIQESADMLLVK---PGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 229 r~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVK---Pa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
+..|+...+...+.-.+......+.-|++.+- |++.=+++++.+|+.. .+|+...-.+|+-.+...+.+.|..|
T Consensus 25 ~~g~~v~~a~~~~eal~~l~~~~~~~dliilD~~lp~~~G~el~~~lr~~~~~~piI~lt~~~~~~~~~~~~~~G~~d 102 (143)
T 3jte_A 25 IDGNEVLTASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFE 102 (143)
T ss_dssp HTTCEEEEESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSE
T ss_pred HCCCEEEEECCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHCCCCE
T ss_conf 879999997484668999984565200123023665201899999999738998399997118999999999879869
No 192
>>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Thermotoga maritima} (A:)
Probab=34.96 E-value=32 Score=15.49 Aligned_cols=57 Identities=9% Similarity=-0.162 Sum_probs=35.9
Q ss_pred HHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECC-CCCCCHHHHHHHH
Q ss_conf 99999997301447986133271001143100136544628999999999999996289735246-6767799999999
Q gi|255764463|r 112 EGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPS-EMMDGRVQEIRKK 189 (337)
Q Consensus 112 rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPS-dMMDGrV~aIR~~ 189 (337)
+.++.+|+.++.+.+-.|+.+.++|.... +-..+++|||+|.-. .+.+-.+..+++.
T Consensus 49 ~~i~~l~~~~~~~~~~~~~~~i~~~~~~~---------------------~~~~~~~gad~itvh~~~~~~~i~~~~~~ 106 (213)
T 1vqt_A 49 KIFDELAKRNLKIILDLKFCDIPSTVERS---------------------IKSWDHPAIIGFTVHSCAGYESVERALSA 106 (213)
T ss_dssp HHHHHHHTTTCEEEEEEEECSCHHHHHHH---------------------HHHHCCTTEEEEEEEGGGCHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEHHHCCCHHHHHHH---------------------HHHHHCCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 99999997799189574335705999999---------------------99885346638998457861056665541
No 193
>>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} (A:1-130,A:202-404)
Probab=34.62 E-value=33 Score=15.46 Aligned_cols=119 Identities=18% Similarity=0.143 Sum_probs=78.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC----CCCCCCCCCCHH---------HHHHHHHHHHHC-C
Q ss_conf 88786328899999999999988893676330256334554----454215765379---------999999997301-4
Q gi|255764463|r 58 SMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNN----TGSHIIDPDNLI---------NEGICAIKKNIP-N 123 (337)
Q Consensus 58 SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~----~GseA~n~dglv---------~rAIr~IK~~fp-d 123 (337)
+....+..+...+.+.++.+.++|+++|-|-|+.+....+. .+.+.|++-++. ..-...+++.-. .
T Consensus 42 ~~~~~~~g~~~~i~~~l~~~~~~G~~~i~l~p~~~~~~~~~~~~~~~~~gy~~~~~~~~~~~~g~~~~~~~lv~~~h~~g 121 (333)
T 1qho_A 42 KWKMYWGGDLEGVRQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNG 121 (333)
T ss_dssp STTSBCCCCHHHHHHTHHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 66765783899999869999975998899698610874456888888875034257872802499999999999999879
Q ss_pred CEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE---ECCCCCCCHHHHHHHHHHHC
Q ss_conf 47986133271001143100136544628999999999999996289735---24667677999999999877
Q gi|255764463|r 124 IGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADII---APSEMMDGRVQEIRKKLDSH 193 (337)
Q Consensus 124 l~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv---APSdMMDGrV~aIR~~Ld~~ 193 (337)
|-||.|+. +.|.+..+.+.+...-..+-|+|.. |..-+=..-.+.+++.+...
T Consensus 122 i~v~~D~v-----------------~~nP~Vr~~i~~~l~~Wid~GvDGfRlDaa~~i~~~~~~~~~~~v~~~ 177 (333)
T 1qho_A 122 IKVIVDFV-----------------PENGTIAQYLTDAAVQLVAHGADGLRIDAVKHFNSGFSKSLADKLYQK 177 (333)
T ss_dssp CEEEEEEC-----------------TTSHHHHHHHHHHHHHHHHTTCCEEEETTGGGSCHHHHHHHHHHHHHH
T ss_pred CEEEEEEC-----------------CCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHC
T ss_conf 99999986-----------------678899999998898998718863651341000245689999998624
No 194
>>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrolase, (beta/alpha)8-barrel; HET: ACR ETE; 1.60A {Pyrococcus woesei} (A:1-109,A:168-337)
Probab=34.58 E-value=33 Score=15.45 Aligned_cols=139 Identities=19% Similarity=0.067 Sum_probs=77.7
Q ss_pred HHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC----C-----------C
Q ss_conf 773311666758988110488878632889999999999998889367633025633455445----4-----------2
Q gi|255764463|r 38 SDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTG----S-----------H 102 (337)
Q Consensus 38 ~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~G----s-----------e 102 (337)
+..||-+|+..-.+.. -+...+.+.+..+.++|+++|-|=|..+.......+ + .
T Consensus 9 ~~~iy~~~~~~~~~~~-----------g~~~~~~~~l~~l~~lG~~~i~l~p~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 77 (279)
T 1mxg_A 9 GGVIMQAFYWDVPGGG-----------IWWDHIRSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKG 77 (279)
T ss_dssp TCCEEECCCTTCCCSS-----------CHHHHHHHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTT
T ss_pred CCEEEEEEECCCCCCC-----------CHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9889996766778888-----------53999999789999619998996967018999889896765664467533356
Q ss_pred CCCC-CCHHHHHHHHHHHHHC-CCEEEECCCCCH-----------------HHCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 1576-5379999999997301-447986133271-----------------00114310013654462899999999999
Q gi|255764463|r 103 IIDP-DNLINEGICAIKKNIP-NIGIITDVALDP-----------------FTIHGHDGILCDGEIVNDETIELISHAAV 163 (337)
Q Consensus 103 A~n~-dglv~rAIr~IK~~fp-dl~vi~DVcLc~-----------------YT~hGHcGi~~~g~IdND~Tl~~L~k~Al 163 (337)
..++ -|-...--+.+++.-. .|.||.|+..|= ..+.|=||+=-|. +.-+.+...
T Consensus 78 ~~~~~~G~~~e~~~lv~~~h~~gi~vi~D~V~DLN~~np~V~~~l~~~~~~W~d~GvDGfRlDa-------a~~i~~~~~ 150 (279)
T 1mxg_A 78 TVETRFGSKEELVRLIQTAHAYGIKVIADVVIHKEWDQYWLWKSNESYAAYLRSIGFDGWRFDY-------VKGYGAWVV 150 (279)
T ss_dssp BSSCSSCCHHHHHHHHHHHHHTTCEEEEEECCTSHHHHHHHTSSTTSHHHHHHHTTCCEEEETT-------GGGSCHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECC-------HHHCCHHHH
T ss_conf 6688899999999999999987999999833464177999999999998777646987587441-------321899999
Q ss_pred HHHHCCCCEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf 9996289735246676779999999998778
Q gi|255764463|r 164 IQADAGADIIAPSEMMDGRVQEIRKKLDSHG 194 (337)
Q Consensus 164 ~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g 194 (337)
.......|...+..+.++-...++.-....+
T Consensus 151 ~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~ 181 (279)
T 1mxg_A 151 RDWLNWWGGWAVGEYWDTNVDALLSWAYESG 181 (279)
T ss_dssp HHHHHHHCCCEEECCCCSCHHHHHHHHHHHT
T ss_pred HHHHHHCCCCEEECCCCCCHHHHHHHHHCCC
T ss_conf 9998645874022124789899875652268
No 195
>>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} (A:415-755)
Probab=34.45 E-value=28 Score=15.89 Aligned_cols=67 Identities=15% Similarity=0.019 Sum_probs=48.7
Q ss_pred CCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHHCCCCEEEC
Q ss_conf 53799999999973014479861332710011431001365--4462899999999999999628973524
Q gi|255764463|r 107 DNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDG--EIVNDETIELISHAAVIQADAGADIIAP 175 (337)
Q Consensus 107 dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g--~IdND~Tl~~L~k~Al~~A~AGaDivAP 175 (337)
...+..+++.+++..+.-++. .+..|+|-..+.-.-+.. .-.-+...+.+.+.+..+.+||||+|.-
T Consensus 107 ~~~~~e~~~~~~~~~~~~v~~--~v~GP~tla~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~aGa~~I~i 175 (341)
T 2nq5_A 107 EPITVEETVYAQSLTDRPVKG--MLTGPITITNWSFERTDIPRDQLFNQIGLAIKDEIKLLENAGIAIIQV 175 (341)
T ss_dssp SCSSHHHHHHHHHTCSSCBEE--EEECHHHHHHHSBCCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 888799999999742777644--200147899986224589999999999999999999999679978996
No 196
>>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate synthetase; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 kdops; 1.75A {Neisseria meningitidis serogroup B} PDB: 3fyo_A* 3fyp_A* 1phw_A* 1g7v_A* 1gg0_A 1phq_A* 1d9e_A* 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A* (A:)
Probab=34.40 E-value=28 Score=15.91 Aligned_cols=66 Identities=18% Similarity=0.032 Sum_probs=29.6
Q ss_pred CCCHHHHHHHHHHHHHC-CCCE------------EEEECCHHHHHHHHHHHCCC--CCHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 53114589999999624-9989------------99934618999999998889--788999999999997726999982
Q gi|255764463|r 260 KPGLPYLDVCFRIKEKF-GLPT------------FAYQVSGEYAMIKAASLQGW--INKNDAMMESLLAFKRAGCDGIFT 324 (337)
Q Consensus 260 KPa~~yLDii~~~k~~~-~~P~------------~aYqVSGEYami~~a~~~g~--~d~~~~~~E~l~~~kRAGAd~Iit 324 (337)
.|--..|..|..+++.+ +.|+ +-=|.|+-...+.++.+.|. .-....++|+....-|++.|.-.+
T Consensus 172 ~~~~~~L~~i~~L~~~~~~~~viiD~sh~~~~~~G~s~h~~g~~~~~~a~a~~a~a~~~~g~iIEkH~t~d~~~~D~~~s 251 (280)
T 2qkf_A 172 DNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGMATRLAGLFLESHPDPKLAKCDGPSA 251 (280)
T ss_dssp TCEECCTTHHHHHHHHTTTCCEEEEHHHHCC----------CHHHHHHHHHHHHHTTCCSEEEEEC--------------
T ss_pred CCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
T ss_conf 33332122101101232211022112233332222455320100102476699897588979999688800068963234
Q ss_pred C
Q ss_conf 0
Q gi|255764463|r 325 Y 325 (337)
Q Consensus 325 Y 325 (337)
-
T Consensus 252 l 252 (280)
T 2qkf_A 252 L 252 (280)
T ss_dssp -
T ss_pred C
T ss_conf 6
No 197
>>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} (A:58-279)
Probab=34.27 E-value=33 Score=15.42 Aligned_cols=131 Identities=16% Similarity=0.246 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCEEECCC------CCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCC
Q ss_conf 89999999999999962897352466------767799999999987788577300336664354301016753102446
Q gi|255764463|r 152 DETIELISHAAVIQADAGADIIAPSE------MMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLL 225 (337)
Q Consensus 152 D~Tl~~L~k~Al~~A~AGaDivAPSd------MMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~ 225 (337)
+.|.+.+.+++-.+++-|+--..|+- .+.-.+.++++..++.|-.-.+| .+.|||-.. ..
T Consensus 17 ~~~~e~i~~i~~~l~~~GvTs~lpT~vt~~~e~~~~~l~~~~~~~~~~ga~ilGi---------HlEGPfis~-----~~ 82 (222)
T 1yrr_A 17 AVSVETLEIMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQALGL---------HLEGPWLNL-----VK 82 (222)
T ss_dssp TSSHHHHHHHHHHHHHTTEEEEEEEEECCCHHHHHHHHHHHHHHHHHCTTSBCCE---------EEECSSCCC-----SC
T ss_pred CCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE---------EECCCCCCH-----HH
T ss_conf 2025578999999872783033025777848899999999999875046521332---------203564560-----11
Q ss_pred CCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCC
Q ss_conf 777-744315721147889888876640898799553114589999999624998999934618999999998889
Q gi|255764463|r 226 KGD-KKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGW 300 (337)
Q Consensus 226 ~gd-r~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~ 300 (337)
+|- ...|- +....+..+...+...+--++-+-|-++-.+.|+.+++. ++-+..=|-..-|...+.|.++|.
T Consensus 83 ~Gah~~~~i---~~p~~~~~~~~~~~~~~i~~iTlAPE~~~~e~i~~l~~~-Gi~vslGHs~A~~e~~~~a~~~Ga 154 (222)
T 1yrr_A 83 KGTHNPNFV---RKPDAALVDFLCENADVITKVTLAPEMVPAEVISKLANA-GIVVSAGHSNATLKEAKAGFRAGI 154 (222)
T ss_dssp C-CCCSCSC---CHHHHHHHHHHHHTTTTEEEEEECGGGSCHHHHHHHHHT-TCEEEECSCCCCHHHHHHHHHHTC
T ss_pred CCCCCCCCC---CCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 023563101---231056788776402410010022000105678998750-344321344456999999997253
No 198
>>1y0e_A Putative N-acetylmannosamine-6-phosphate 2- epimerase; mannac-6-P epimerase, NANE, structural genomics, protein structure initiative; 1.95A {Staphylococcus aureus subsp} (A:1-207)
Probab=33.71 E-value=34 Score=15.36 Aligned_cols=63 Identities=10% Similarity=0.015 Sum_probs=42.3
Q ss_pred HHHHHHHHHCCCCEEEECCCH------------HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 988887664089879955311------------45899999996249989999346189999999988897889999999
Q gi|255764463|r 243 IREASIDIQESADMLLVKPGL------------PYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMES 310 (337)
Q Consensus 243 ~~e~~~D~~EGAD~lMVKPa~------------~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~ 310 (337)
...+..-++-|+|.+.|-... .-++.++++++.+++|+.+ .|-+... |.
T Consensus 129 ~~~a~~~~~~G~~~i~v~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~iPvia---------------~GGI~~~----~~ 189 (207)
T 1y0e_A 129 VEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIA---------------EGNVITP----DX 189 (207)
T ss_dssp HHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEE---------------ESSCCSH----HH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEE---------------ECCCCCH----HH
T ss_conf 9999999982799358960588544658876442799999998436887898---------------6898999----99
Q ss_pred HHHHHHHCCCEEEE
Q ss_conf 99997726999982
Q gi|255764463|r 311 LLAFKRAGCDGIFT 324 (337)
Q Consensus 311 l~~~kRAGAd~Iit 324 (337)
...+..+|||.+.-
T Consensus 190 ~~~~~~~GAd~V~v 203 (207)
T 1y0e_A 190 YKRVXDLGVHCSVV 203 (207)
T ss_dssp HHHHHHTTCSEEEE
T ss_pred HHHHHHCCCCEEEE
T ss_conf 99999869999998
No 199
>>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomerase; 1.69A {Mytilus edulis} (A:1-265)
Probab=33.43 E-value=34 Score=15.33 Aligned_cols=166 Identities=13% Similarity=0.032 Sum_probs=95.1
Q ss_pred HHHHCCCCEEEEEECCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHH
Q ss_conf 99988893676330256334--5544542157653799999999973014479861332710011431001365446289
Q gi|255764463|r 76 QVADLGIPAIAIFPNIPMDL--RNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDE 153 (337)
Q Consensus 76 ~~~~lGI~av~LFp~I~~~~--Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~ 153 (337)
-+.+.|..++.+=+...... ....+.-. -.-+...++.|.... ++-|++|. ++|+.+ .
T Consensus 34 ~~~~~g~~ai~~s~~~~a~~~G~pD~~~~~---~~e~~~~~~~i~~~~-~~PviaD~------d~G~g~---------~- 93 (265)
T 1s2w_A 34 IVQEAGFKGIWGSGLSVSAQLGVRDSNEAS---WTQVVEVLEFMSDAS-DVPILLDA------DTGYGN---------F- 93 (265)
T ss_dssp HHHHHTCSCEEECCHHHHHTC------------CHHHHHHHHHHHHTC-SSCEEEEC------CSSCSS---------H-
T ss_pred HHHHCCCCEEEECHHHHHHHCCCCCCCCCC---HHHHHHHHHHHHHCC-CCCEEEEC------CCCCCC---------C-
T ss_conf 999859999981569999976999999898---789999998774025-77503523------434344---------1-
Q ss_pred HHHHHHHHHHHHHHCCCCEEECCCC--------CCC----------HHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCH
Q ss_conf 9999999999999628973524667--------677----------9999999998778857730033666435430101
Q gi|255764463|r 154 TIELISHAAVIQADAGADIIAPSEM--------MDG----------RVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPY 215 (337)
Q Consensus 154 Tl~~L~k~Al~~A~AGaDivAPSdM--------MDG----------rV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPF 215 (337)
+...+.+-.+.++||+.|-=-|- ++| .++.++.+.+..+-.+..|.+-+
T Consensus 94 --~~v~~~v~~~~~aGa~gi~IED~~~~k~~~~~~~~~~~~i~~~~~~~~~~~a~~a~~~~~~~i~ART----------- 160 (265)
T 1s2w_A 94 --NNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARV----------- 160 (265)
T ss_dssp --HHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEE-----------
T ss_pred --HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHH-----------
T ss_conf --1799999999984231246513214555553334444545799999998877763268631575311-----------
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCC--EEEEECCHHH
Q ss_conf 6753102446777744315721147889888876640898799553114589999999624998--9999346189
Q gi|255764463|r 216 RDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLP--TFAYQVSGEY 289 (337)
Q Consensus 216 RdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P--~~aYqVSGEY 289 (337)
--+..-....|++..+...++-|||.+++--..+.++.+...+.....| ..+-...|.+
T Consensus 161 ---------------da~~~~~~~~eai~Ra~ay~~aGAd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (265)
T 1s2w_A 161 ---------------EAFIAGWGLDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWNNQGPVVIVPTKYYK 221 (265)
T ss_dssp ---------------CTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTTCSCEEECCSTTTT
T ss_pred ---------------HCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCHHEEEECCCCCC
T ss_conf ---------------1024589999999999999836997576035567588899988621454220332135675
No 200
>>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis} (A:143-284)
Probab=32.94 E-value=35 Score=15.28 Aligned_cols=72 Identities=13% Similarity=0.084 Sum_probs=44.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHHHHCCCCCHHHH
Q ss_conf 774431572114788988887664089879955311458999999962-4998999934618999999998889788999
Q gi|255764463|r 228 DKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEK-FGLPTFAYQVSGEYAMIKAASLQGWINKNDA 306 (337)
Q Consensus 228 dr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~-~~~P~~aYqVSGEYami~~a~~~g~~d~~~~ 306 (337)
.+...=..+++..|+ ......|+|++++=|--|. +....++.. ..+|+.|- |-++.
T Consensus 64 ~~~~i~~s~~t~~e~----~~a~~~g~D~v~l~pv~p~-~~~~~~~~~~~~~pi~A~---------------GGI~~--- 120 (142)
T 3l0g_A 64 KNEYIAIECDNISQV----EESLSNNVDMILLDNMSIS-EIKKAVDIVNGKSVLEVS---------------GCVNI--- 120 (142)
T ss_dssp SSCCEEEEESSHHHH----HHHHHTTCSEEEEESCCHH-HHHHHHHHHTTSSEEEEE---------------SSCCT---
T ss_pred CCCEEEEEECCHHHH----HHHHCCCCEEEECCCCCHH-HHHHHHHHHCCCEEEEEE---------------CCCCH---
T ss_conf 884599994659987----6541158548853889989-999999985895799998---------------99999---
Q ss_pred HHHHHHHHHHHCCCEEEE
Q ss_conf 999999997726999982
Q gi|255764463|r 307 MMESLLAFKRAGCDGIFT 324 (337)
Q Consensus 307 ~~E~l~~~kRAGAd~Iit 324 (337)
|.+..+..+|||.|..
T Consensus 121 --~ni~~~~~~Gad~v~~ 136 (142)
T 3l0g_A 121 --RNVRNIALTGVDYISI 136 (142)
T ss_dssp --TTHHHHHTTTCSEEEC
T ss_pred --HHHHHHHHCCCCEEEC
T ss_conf --9999999759999986
No 201
>>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} (A:)
Probab=32.79 E-value=35 Score=15.26 Aligned_cols=59 Identities=14% Similarity=0.175 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCC
Q ss_conf 99999999999988893676330256334554454215765379999999997301447986133271001143
Q gi|255764463|r 67 IDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGH 140 (337)
Q Consensus 67 id~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGH 140 (337)
=..+++.++.+.++|.+.+.++ ++- -. +.+.+++.+.+.+|+..|+||.+--+.+.++-
T Consensus 142 G~T~i~a~~~Lk~~Ga~~v~i~-~th-~i-------------~s~~a~~~i~~~~~~~~i~t~ti~~~~~~~~~ 200 (217)
T 3dmp_A 142 GYSAAHAIDVLKRRGVPGERLM-FLA-LV-------------AAPEGVQVFQDAHPDVKLYVASLDSHLDDHAY 200 (217)
T ss_dssp SHHHHHHHHHHHTTTCCGGGEE-EEC-SE-------------ECHHHHHHHHHHCTTCEEEESEECCEECTTSC
T ss_pred HHHHHHHHHHHHHCCCCCCEEE-EEE-EE-------------ECHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
T ss_conf 0889999999998699951799-999-99-------------65899999998797978999854777799971
No 202
>>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} (A:1-10,A:129-393)
Probab=32.71 E-value=35 Score=15.25 Aligned_cols=137 Identities=9% Similarity=0.070 Sum_probs=67.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCH
Q ss_conf 4888786328899999999999988893676330-256334554454215765379999999997301447986133271
Q gi|255764463|r 56 INSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFP-NIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDP 134 (337)
Q Consensus 56 I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp-~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~ 134 (337)
....+.....-.+.+.++++.+.+.|...|-++- ....-.++. ...++...++.+.+...+..++.-+|.+.
T Consensus 56 y~~~~~ll~~l~~~~~e~~~~l~~aGa~~IqidEP~~~~~~~~~-------~~e~~~~~~~~l~~~~~~~~~~vHic~~~ 128 (275)
T 1u1j_A 56 SFELLSLLPKILPIYKEVITELKAAGATWIQLDEPVLVXDLEGQ-------KLQAFTGAYAELESTLSGLNVLVETYFAD 128 (275)
T ss_dssp TCCGGGGHHHHHHHHHHHHHHHHHTTCCEEEEECGGGGSCCCHH-------HHHHHHHHHHHSTTTTCSSEEEEECCSSC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHH-------HHHHHHHHHHHHHHCCCCCEEEEEEECCC
T ss_conf 76899999999999999999998668988997287201469999-------99999999999984369984899850688
Q ss_pred HHCC---------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHH----HHHHHCCCCCCCE
Q ss_conf 0011---------4310013654462899999999999999628973524667677999999----9998778857730
Q gi|255764463|r 135 FTIH---------GHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIR----KKLDSHGHINVGI 200 (337)
Q Consensus 135 YT~h---------GHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR----~~Ld~~g~~~~~I 200 (337)
.+.. |=+++--+-... ......+.+.-..--..+.-+|-|..++-+....|+ ++++.-|.....|
T Consensus 129 ~~~~~~~~l~~~~~~d~l~~d~~~~-~~~~~~~~~~~~~~~~~~~G~id~~~~~~et~eeI~~~v~~~~~~~~~~~~ii 206 (275)
T 1u1j_A 129 IPAEAYKTLTSLKGVTAFGFDLVRG-TKTLDLVKAGFPEGKYLFAGVVDGRNIWANDFAASLSTLQALEGIVGKDKLVV 206 (275)
T ss_dssp CCHHHHHHHTTCTTCCEEEEESSSC-TTHHHHHHHCCCSSCEEEEEEECSSSCBCCCHHHHHHHHHHHHHHCCSSCEEE
T ss_pred CCCHHHHHHHHCCCCCEEEEEEECC-CCCCHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 7605499986278975699987458-65406788638998889886671687875999999999999997368110787
No 203
>>3cq0_A Putative transaldolase YGR043C; alpha/beta barrel, pentose shunt, transferase; HET: PG4; 1.90A {Saccharomyces cerevisiae} (A:)
Probab=31.81 E-value=28 Score=15.94 Aligned_cols=98 Identities=15% Similarity=0.086 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCC-CCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999999996289735246676779999999998778857-73003366643543010167531024467777443
Q gi|255764463|r 154 TIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHIN-VGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTY 232 (337)
Q Consensus 154 Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~-~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sY 232 (337)
|+--=..||..-|+|||++|+|= |+-|....+...-.. ...=.......-..|.-||.---++. ..+
T Consensus 169 Tlifs~~Qa~~aa~Aga~~iSpf------vgRi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~T~-vl~----- 236 (339)
T 3cq0_A 169 TLLFSFTQAVACAEANVTLISPF------VGRIMDFYKALSGKDYTAETDPGVLSVKKIYSYYKRHGYATE-VMA----- 236 (339)
T ss_dssp EEECCHHHHHHHHHTTCSEEEEB------SHHHHHHHHHC---CCCTTTCHHHHHHHHHHHHHHHHTCCCE-EEE-----
T ss_pred EEEECHHHHHHHHHHCCEEEEHH------HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCE-EEH-----
T ss_conf 77621888899998287035246------430004655114443455568569999999999997698741-413-----
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH
Q ss_conf 1572114788988887664089879955311458999999962
Q gi|255764463|r 233 YLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEK 275 (337)
Q Consensus 233 Qmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~ 275 (337)
-.++|..+.+ .-=|+|.+-+-|. ++..+.+.
T Consensus 237 -AS~r~~~~v~------~LaG~d~vTip~~-----~l~~l~~~ 267 (339)
T 3cq0_A 237 -ASFRNLDELK------ALAGIDNMTLPLN-----LLEQLYES 267 (339)
T ss_dssp -BCCCSHHHHH------HHTTSSEEEEEHH-----HHHHHHHC
T ss_pred -HCCCCHHHHH------HHHCCCCCCCCHH-----HHHHHHHC
T ss_conf -2016517789------8718994258999-----99999856
No 204
>>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiative, PSI-2; 2.81A {Galdieria sulphuraria} (A:)
Probab=31.73 E-value=36 Score=15.15 Aligned_cols=130 Identities=11% Similarity=0.042 Sum_probs=84.4
Q ss_pred CCHHHHHHHHHHHCCCCC-CCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 779999999998778857-7300336664354301016753102446777744315721147889888876640898799
Q gi|255764463|r 180 DGRVQEIRKKLDSHGHIN-VGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLL 258 (337)
Q Consensus 180 DGrV~aIR~~Ld~~g~~~-~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lM 258 (337)
...+..+.+.+...+..+ +.+.|+.......+ +. -.|.+ +..|..++............-..-|++.+-
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~----~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 194 (258)
T 2o55_A 125 SGDHQRLLLLVEKYHXQERVDYCSFHHEALAHL----KA---LCPDV---KITYLFNYXGQPTPLDFVEQACYGDANGVS 194 (258)
T ss_dssp SSHHHHHHHHHHTTTCGGGEEEEESSHHHHHHH----HH---HCTTC---EEEEECCTTSCCCCTTHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH----HH---HHHCC---CCEEEEECCCCCHHHHHHHHHHHCCCCEEE
T ss_conf 179999999999708653555556988899999----99---86237---603443010242167899998851674440
Q ss_pred ECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHC
Q ss_conf 553114589999999624998999934618999999998889788999999999997726999982018999999850
Q gi|255764463|r 259 VKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAARILTH 336 (337)
Q Consensus 259 VKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~~L~~ 336 (337)
+.-.+.--++++.+++ .++++.+|-+.. -+|.. +.+.-+.+.|+|.|+|=+...++++|++
T Consensus 195 ~~~~~~~~~~v~~~~~-~g~~v~~w~~~~------------tvn~~----~~~~~~~~~Gvd~i~TD~p~~l~~~~~~ 255 (258)
T 2o55_A 195 XLFHYLTKEQVCTAHE-KGLSVTVWXPWI------------FDDSE----EDWKKCLELQVDLICSNYPFGLXNFLSN 255 (258)
T ss_dssp EEGGGCCHHHHHHHHH-TTCEEEEECCTT------------CCCCH----HHHHHHHHHTCSEEEESCHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHH-CCCEEEEEECCC------------CCCCH----HHHHHHHHCCCCEEEECCHHHHHHHHHH
T ss_conf 2076768999999998-699899985788------------89859----9999999779899998979999999986
No 205
>>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A (A:131-297)
Probab=31.65 E-value=6.9 Score=20.02 Aligned_cols=126 Identities=11% Similarity=0.147 Sum_probs=64.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEE-C-------------
Q ss_conf 8899999999999988893676330256334554454215765379999999997301-447986-1-------------
Q gi|255764463|r 65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIIT-D------------- 129 (337)
Q Consensus 65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~-D------------- 129 (337)
-+.+.+.++++++.+.|.+.|-+=.+.+.. .|. .-++++++.++ +..++. |
T Consensus 11 ~~~e~~~~~~~~~~~~G~~~~Kikvg~d~~-~~~-------------~~~~~~r~~~~~~~~~l~~Dan~~~~~~~a~~~ 76 (167)
T 3gd6_A 11 EEVESNLDVVRQKLEQGFDVFRLYVGKNLD-ADE-------------EFLSRVKEEFGSRVRIKSYDFSHLLNWKDAHRA 76 (167)
T ss_dssp THHHHHHHHHHHHHHTTCCEEEEECSSCHH-HHH-------------HHHHHHHHHHGGGCEEEEEECTTCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCCEECCCCCCCH-HHH-------------HHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHH
T ss_conf 003678999998875024310013576413-678-------------876655552234342131022121007999999
Q ss_pred ---------------CCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCC
Q ss_conf ---------------33271001143100136544628999999999999996289735246676779999999998778
Q gi|255764463|r 130 ---------------VALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHG 194 (337)
Q Consensus 130 ---------------VcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g 194 (337)
=.+.+...+||--+-..-.|-.++++..+....-...+.++|++-|-=+--|-+...++..+..-
T Consensus 77 ~~~l~~~~~~~~~iEeP~~~~~~~~~~~l~~~~pi~~~e~~~~~~~~~~~i~~~~~d~~~~~~~~~GGi~~~~~i~~~A~ 156 (167)
T 3gd6_A 77 IKRLTKYDLGLEMIESPAPRNDFDGLYQLRLKTDYPISEHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAYAAE 156 (167)
T ss_dssp HHHHTTCCSSCCEEECCSCTTCHHHHHHHHHHCSSCEEEECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 99998614563111475322005678887541467642443220234332102415798622334532778999999999
Q ss_pred CCCCCEECHH
Q ss_conf 8577300336
Q gi|255764463|r 195 HINVGIMPYV 204 (337)
Q Consensus 195 ~~~~~ImsYs 204 (337)
-.+++++.+|
T Consensus 157 ~~gi~v~~h~ 166 (167)
T 3gd6_A 157 VASKDVVLGT 166 (167)
T ss_dssp HTTCEEEECC
T ss_pred HCCCCEEECC
T ss_conf 8198472468
No 206
>>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum} (A:)
Probab=31.33 E-value=33 Score=15.46 Aligned_cols=105 Identities=13% Similarity=0.201 Sum_probs=65.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEE---CCCCCCCHHHHHHHHHHHCCCCCCCEECHHHH-HHHHHHCCHHHHHHC
Q ss_conf 65446289999999999999962897352---46676779999999998778857730033666-435430101675310
Q gi|255764463|r 146 DGEIVNDETIELISHAAVIQADAGADIIA---PSEMMDGRVQEIRKKLDSHGHINVGIMPYVAK-FNSSFYGPYRDAIST 221 (337)
Q Consensus 146 ~g~IdND~Tl~~L~k~Al~~A~AGaDivA---PSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaK-faS~fYgPFRdA~~S 221 (337)
++.++|+.+.+.+...+-..++-|||++= |.+--+.. +........-+.|++=... --..|..-|++|+..
T Consensus 190 g~~~~~~~~p~~i~~a~r~~~elGaDi~K~~~p~~~~~~~-----~~v~~~~~~pvvilGG~~~~d~~~~l~~~~~A~~~ 264 (307)
T 3fok_A 190 NGKVVNDLSTDAVIQSVAIAAGLGNDSSYTWXKLPVVEEX-----ERVXESTTXPTLLLGGEGGNDPDATFASWEHALTL 264 (307)
T ss_dssp TTEEEECCSHHHHHHHHHHHHTCSSCCSSEEEEEECCTTH-----HHHGGGCSSCEEEECCSCC--CHHHHHHHHHHTTS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHH-----HHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 7656677788999999999999688778614899807789-----99998089978996799899999999999999985
Q ss_pred C--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 2--446777744315721147889888876640898
Q gi|255764463|r 222 R--DLLKGDKKTYYLDPANVQEAIREASIDIQESAD 255 (337)
Q Consensus 222 ~--p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD 255 (337)
. ..|-.-|.-+|-+..|....++.+..=+.||+.
T Consensus 265 ~Ga~G~~~GRniwq~~~~dp~~~~~al~~ivh~~~~ 300 (307)
T 3fok_A 265 PGVRGLTVGRTLLYPQDGDVAAAVDTAARLVHTDIQ 300 (307)
T ss_dssp TTEEEEEECTTTSSCSSSCHHHHHHHHHHHHCCCC-
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHH
T ss_conf 798289867012678988999999999998643666
No 207
>>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, 2Fe-2S, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-binding; HET: CHD HEM GOL; 1.60A {Homo sapiens} PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 2pnj_A* 2po5_A* 2po7_A* (A:1-164,A:308-359)
Probab=31.28 E-value=37 Score=15.10 Aligned_cols=87 Identities=14% Similarity=0.062 Sum_probs=54.7
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--CCCEEEECCCCCHHHCCCC
Q ss_conf 32889999999999998889367633025633455445421576537999999999730--1447986133271001143
Q gi|255764463|r 63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI--PNIGIITDVALDPFTIHGH 140 (337)
Q Consensus 63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f--pdl~vi~DVcLc~YT~hGH 140 (337)
+||+--.+.+.++++.+-|+..+++||--|.-.-...||. +...-+.+++.- |++-..
T Consensus 99 mRY~~P~iee~i~ql~~dg~~~iI~lplyPqyS~sTtgSs-------~~~l~~~~~~~~~~~~~~~~------------- 158 (216)
T 3hcn_A 99 FRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSS-------LNAIYRYYNQVGRKPTMKWS------------- 158 (216)
T ss_dssp ESSSSSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHH-------HHHHHHHHHHTTCCCSSEEE-------------
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCHH-------HHHHHHHHHHHCCCCCCCCC-------------
T ss_conf 2536521699999998659854211246541234232215-------78999999985100035664-------------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 1001365446289999999999999962897
Q gi|255764463|r 141 DGILCDGEIVNDETIELISHAAVIQADAGAD 171 (337)
Q Consensus 141 cGi~~~g~IdND~Tl~~L~k~Al~~A~AGaD 171 (337)
++..-.=||..=++.|+.++..|-++|.-
T Consensus 159 --~I~~~yn~~~~f~~~l~d~~~~~l~~~~~ 187 (216)
T 3hcn_A 159 --TIDRWPNGNPLFSKALADLVHSHIQSNEL 187 (216)
T ss_dssp --EECCCTTTCHHHHHHHHHHHHHHHHHTCS
T ss_pred --CCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf --33566799989999999999999647987
No 208
>>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} (A:1-134,A:199-399)
Probab=31.22 E-value=37 Score=15.09 Aligned_cols=121 Identities=18% Similarity=0.173 Sum_probs=80.6
Q ss_pred CCCCCCCCCCCHHHHHHHHH--HHHHCCCCEEEEEECCCCCCCCC---------CCC-----CCCCCC-CHHHHHHH-HH
Q ss_conf 48887863288999999999--99988893676330256334554---------454-----215765-37999999-99
Q gi|255764463|r 56 INSMPDVMRMSIDVAVEKIK--QVADLGIPAIAIFPNIPMDLRNN---------TGS-----HIIDPD-NLINEGIC-AI 117 (337)
Q Consensus 56 I~SMPGv~R~Sid~L~~eie--~~~~lGI~av~LFp~I~~~~Kd~---------~Gs-----eA~n~d-glv~rAIr-~I 117 (337)
..+.+..+......+.+.+. .+.++|+.+|-|-|+.+...-+. .|- .+.++. |=. ...+ .+
T Consensus 40 ~~~~~~~~~g~~~~~~~kl~~~~l~~lG~~~i~l~p~~~~~~~~~~~~~~~~~~~gy~~~~~~~~~~~~Gt~-~~~~~lv 118 (335)
T 1cyg_A 40 CTNLRKYCGGDWQGIINKINDGYLTDMGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFGTL-SDFQRLV 118 (335)
T ss_dssp GCSTTSBCCCCHHHHHHHHHTSTTTTTTCCEEEECCCEEECCCCCSSSSCCCSTTSCSEEEEEEECTTTCCH-HHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHCHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHH
T ss_conf 766676578389999875086889873999999796635676755555677778885733578727256999-9999999
Q ss_pred HHHHC-CCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE---ECCCCCCCHHHHHHHHHHHC
Q ss_conf 97301-447986133271001143100136544628999999999999996289735---24667677999999999877
Q gi|255764463|r 118 KKNIP-NIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADII---APSEMMDGRVQEIRKKLDSH 193 (337)
Q Consensus 118 K~~fp-dl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv---APSdMMDGrV~aIR~~Ld~~ 193 (337)
++.-. .|.||.|| .+.|.++.+.+.+...-..+-|+|.. +-.-+=..-.+.++++++..
T Consensus 119 ~~~h~~gi~vi~D~-----------------V~~np~V~~~l~~~l~~Wie~GVDGFRlDaa~~~~~~~~~~~~~~~~~~ 181 (335)
T 1cyg_A 119 DAAHAKGIKVIIDF-----------------APQNPVIDRYLKDAVKMWIDMGIDGIRMDAVKHMPFGWQKSLMDEIDNY 181 (335)
T ss_dssp HHHHHTTCEEEEEE-----------------CTTSHHHHHHHHHHHHHHHTTTCCEEEESCGGGSCSHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEEE-----------------CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 99998899999998-----------------9699999999999999999848988998320148767799999764420
Q ss_pred C
Q ss_conf 8
Q gi|255764463|r 194 G 194 (337)
Q Consensus 194 g 194 (337)
.
T Consensus 182 ~ 182 (335)
T 1cyg_A 182 R 182 (335)
T ss_dssp C
T ss_pred C
T ss_conf 1
No 209
>>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} (A:1-143)
Probab=30.96 E-value=34 Score=15.36 Aligned_cols=71 Identities=15% Similarity=0.277 Sum_probs=54.8
Q ss_pred CCCCCCCCCH-HHHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 7443157211-478898888766408987995---53114589999999624-99899993461899999999888978
Q gi|255764463|r 229 KKTYYLDPAN-VQEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 229 r~sYQmd~~n-~~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
+..||...+. ..+|+.... ++.-|.+.+ =|+|.-+++++.+++.. ..|+..+-..|+......|-+.|..+
T Consensus 26 ~~g~~v~~a~~~~~al~~l~---~~~~d~iilD~~lp~~~G~el~~~ir~~~~~~pvI~~t~~~~~~~~~~a~~~G~~~ 101 (143)
T 1yio_A 26 SAGFEVETFDCASTFLEHRR---PEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITAHGDIPMTVRAMKAGAIE 101 (143)
T ss_dssp TTTCEEEEESSHHHHHHHCC---TTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESCTTSCCCHHHHHTTEEE
T ss_pred HCCCEEEEECCHHHHHHHHH---HCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCE
T ss_conf 77999999789999999988---45986999724546878853005778873357379998628799999999678988
No 210
>>1t7l_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; TIM barrel, methyltetrahydrofolate, zinc; 2.00A {Thermotoga maritima} PDB: 3bq5_A 3bq6_A 1xdj_A 1xr2_A* 1xpg_A* (A:392-766)
Probab=30.87 E-value=37 Score=15.05 Aligned_cols=66 Identities=14% Similarity=0.030 Sum_probs=49.2
Q ss_pred CCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 53799999999973014479861332710011431001365--446289999999999999962897352
Q gi|255764463|r 107 DNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDG--EIVNDETIELISHAAVIQADAGADIIA 174 (337)
Q Consensus 107 dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g--~IdND~Tl~~L~k~Al~~A~AGaDivA 174 (337)
...+..+++.+++..++-++ -++..|+|--.++-.-+.. .-.-+.-.+.+.+.+..+.+||||+|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~--~~v~gP~Tla~~~~~~~~~~~~~ll~~i~~~~~~~~~~~~~aG~~~Iq 216 (375)
T 1t7l_A 149 EPMTLKEITYAQSLTEKPVK--GMLTGPVTIMSWSYYREDIPEREIAYQIALAINEEVKDLEEAGIKIVQ 216 (375)
T ss_dssp SCSSHHHHHHHHHTCSSCBE--EEEECHHHHHHTSEECSSSCHHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCHHHHHHHHHHCCCCCC--CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 98759999999864367654--321217888765226667999999999999999999999986998999
No 211
>>1b43_A Protein (FEN-1); nuclease, DNA repair, DNA replication; 2.00A {Pyrococcus furiosus} (A:1-211,A:289-340)
Probab=30.77 E-value=38 Score=15.04 Aligned_cols=43 Identities=9% Similarity=0.192 Sum_probs=32.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 8786328899999999999988893676330256334554454
Q gi|255764463|r 59 MPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGS 101 (337)
Q Consensus 59 MPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~Gs 101 (337)
-.|.+.--+..+...+..+.+.||+-|-+|-+.++..|..+-.
T Consensus 50 ~~G~~ts~l~~l~~r~~~l~~~gI~pVfVFDG~~p~~K~~~~~ 92 (263)
T 1b43_A 50 SKGRITSHLSGLFYRTINLMEAGIKPVYVFDGEPPEFKKKELE 92 (263)
T ss_dssp TTSCBCHHHHHHHHHHHHHHHTTCEEEEEECCSCCCCSSCSST
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHH
T ss_conf 6898067999999999999854998699986897717777765
No 212
>>1bwv_A Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation,complex (rubisco/reaction intermediate), high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} (A:158-308,A:380-493)
Probab=30.26 E-value=38 Score=14.99 Aligned_cols=107 Identities=11% Similarity=0.161 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999999999628973524667677999999999877885773003366643543010167531024467777443
Q gi|255764463|r 153 ETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTY 232 (337)
Q Consensus 153 ~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sY 232 (337)
-|-+.+++++..++..|.|+|= |.++..+-+-|.+.-.+..+ . +|+.-+-.-.|.+|.|
T Consensus 32 Ls~~~~a~~~ye~~~GGiDfIK----------------DDE~l~~qpf~p~~eRv~~v-~----eai~kA~~ETGe~K~~ 90 (265)
T 1bwv_A 32 LSGKNYGRVVYEALKGGLDFVX----------------DDENINSQPFMRWRERYLFT-M----EAVNKASAATGEVKGH 90 (265)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEE----------------CCTTCSSBTTBCHHHHHHHH-H----HHHHHHHHHHTSCCEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEC----------------CCCCCCCCCCCCHHHHHHHH-H----HHHHHHHHHHCCEEEE
T ss_conf 8989999999999716760531----------------67555787778699999999-9----9999999986982389
Q ss_pred CCCCCHH-HHH-HHHHHHHHHCCCCEEEECC--CHHHHHHHHHHHHHCCCCE
Q ss_conf 1572114-788-9888876640898799553--1145899999996249989
Q gi|255764463|r 233 YLDPANV-QEA-IREASIDIQESADMLLVKP--GLPYLDVCFRIKEKFGLPT 280 (337)
Q Consensus 233 Qmd~~n~-~eA-~~e~~~D~~EGAD~lMVKP--a~~yLDii~~~k~~~~~P~ 280 (337)
-+|.... .|- .+..+.=.+.|+.++|+-+ |.+=++-++...+...+++
T Consensus 91 y~NiTa~~~eeM~rrae~a~e~G~~i~m~~l~~G~tal~sLa~~ardngl~L 142 (265)
T 1bwv_A 91 YLNVTAATMEEMYARANFAKELGSVIIMIDLVIGYTAIQTMAKWARDNDMIL 142 (265)
T ss_dssp EEECCCSSHHHHHHHHHHHHHTTCSEEEEEGGGCHHHHHHHHHHHHHTTCEE
T ss_pred EECCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCEEE
T ss_conf 8406886499999999999975973998567543699999998644267154
No 213
>>2vp8_A Dihydropteroate synthase 2; RV1207, transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis} (A:)
Probab=30.05 E-value=39 Score=14.96 Aligned_cols=108 Identities=12% Similarity=0.084 Sum_probs=65.3
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCC
Q ss_conf 86328899999999999988893676330256334554454215765379999999997301447986133271001143
Q gi|255764463|r 61 DVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGH 140 (337)
Q Consensus 61 Gv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGH 140 (337)
|....+.+.+++.+++..+.|-.-|=+= .-+ ......-+ .-.+-.-+..+|+.|+++++++.|-.| .|...=.
T Consensus 58 ~~~~~d~~~~~~~a~~~i~~GAdiIDig-~~s-t~p~~~v~-~eeE~~rl~~vi~~i~~~~~~vpiSID----T~~~~v~ 130 (318)
T 2vp8_A 58 KGATFSDAAARDAVHRAVADGADVIDVG-GVK-AGPGERVD-VDTEITRLVPFIEWLRGAYPDQLISVD----TWRAQVA 130 (318)
T ss_dssp ------CHHHHHHHHHHHHTTCSEEEEC------------C-HHHHHHHHHHHHHHHHHHSTTCEEEEE----CSCHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEC-CCC-CCCCCCCC-CHHEEECCCCHHHHHCCCCEEEEEEEC----CCCHHHH
T ss_conf 9858799999999999998799699979-701-79989788-022230123214332023305887403----3577887
Q ss_pred CCCCC-CCCCCHHHHHHHHHHHHHHHHHCCCCEEEC
Q ss_conf 10013-654462899999999999999628973524
Q gi|255764463|r 141 DGILC-DGEIVNDETIELISHAAVIQADAGADIIAP 175 (337)
Q Consensus 141 cGi~~-~g~IdND~Tl~~L~k~Al~~A~AGaDivAP 175 (337)
---+. .-.|.||-|-...-++.-..++.|+.+|.-
T Consensus 131 ~~al~~G~~iINdisg~~~~~~~~l~~~~~~~vV~m 166 (318)
T 2vp8_A 131 KAACAAGADLINDTWGGVDPAMPEVAAEFGAGLVCA 166 (318)
T ss_dssp HHHHHHTCCEEEETTSSSSTTHHHHHHHHTCEEEEE
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCCCC
T ss_conf 778752622762543021388999998528984103
No 214
>>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica} (A:)
Probab=29.43 E-value=40 Score=14.89 Aligned_cols=72 Identities=10% Similarity=0.075 Sum_probs=54.1
Q ss_pred CCCCCCCCCHH-HHHHHHHHHHHHCCCCEEE---ECCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCC-CCC
Q ss_conf 74431572114-7889888876640898799---553114589999999624-99899993461899999999888-978
Q gi|255764463|r 229 KKTYYLDPANV-QEAIREASIDIQESADMLL---VKPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQG-WIN 302 (337)
Q Consensus 229 r~sYQmd~~n~-~eA~~e~~~D~~EGAD~lM---VKPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g-~~d 302 (337)
++.|+...++. .+|+..... .+-.|++. -=|++.=++++..+++.. .+|+...--.++..+...|.+.| ..|
T Consensus 25 ~~~~~v~~a~~~~~Al~~l~~--~~~~divllD~~mP~~dG~~ll~~ir~~~p~~pvI~lT~~~~~~~~~~ai~~G~~~d 102 (151)
T 3kcn_A 25 SFDFEVTTCESGPEALACIKK--SDPFSVIXVDXRXPGXEGTEVIQKARLISPNSVYLXLTGNQDLTTAXEAVNEGQVFR 102 (151)
T ss_dssp TTTSEEEEESSHHHHHHHHHH--SCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGGGHHHHHHHHHHTCCSE
T ss_pred HCCCEEEEECCHHHHHHHHHH--CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCC
T ss_conf 879989997678999999985--699709998489989875999999998199987999734799999999996788873
No 215
>>1xqi_A Nucleoside diphosphate kinase; alpha/beta sandwich, ferredoxin fold, transferase; HET: PGE; 2.50A {Pyrobaculum aerophilum} (A:)
Probab=29.36 E-value=18 Score=17.28 Aligned_cols=126 Identities=17% Similarity=0.139 Sum_probs=69.9
Q ss_pred EEECCCCCCCHHHHHHHHHHHCCCCCC--CEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 352466767799999999987788577--300336664354301016753102446777744315721147889888876
Q gi|255764463|r 172 IIAPSEMMDGRVQEIRKKLDSHGHINV--GIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASID 249 (337)
Q Consensus 172 ivAPSdMMDGrV~aIR~~Ld~~g~~~~--~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D 249 (337)
+|=|..+-.|.++.|-+.+.++||.=+ -.+..+...+..||++.++-....-. +-....+-=..-..|-..+.-.
T Consensus 21 iIKPDav~~~~~g~Ii~~i~~~Gf~I~~~k~~~~~~~~a~~fy~~~~~v~~~~~~--~~~~~~~~~~~lt~~~a~~~Y~- 97 (195)
T 1xqi_A 21 ILKPDAVARGLVDEIISRFKKAGLKIVALKXVKASPEEIERFYPSSEEWLQSAGQ--KLLKAYQELGIDPRAKIGTDDP- 97 (195)
T ss_dssp EECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHSCCCHHHHHHHHH--HHHHHHHHHTCCHHHHHSCCCH-
T ss_pred EECCHHHCCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCCCCCCCCCCCC-
T ss_conf 9894143247899999999987998999860128999999999999887754001--2345566530231000123442-
Q ss_pred HHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 64089879955311458999999962499899993461899999999888978899999999
Q gi|255764463|r 250 IQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESL 311 (337)
Q Consensus 250 ~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l 311 (337)
...+-||-+- -+.-.+.-|+.|.-++||=|--+.---.|--|...+--+++
T Consensus 98 ---------~~~gk~ff~~--Lv~~mtSgpvvalvl~g~naV~~~R~l~Gptdp~~A~p~ti 148 (195)
T 1xqi_A 98 ---------VEVGRIIKRN--LVKYXTSGPNVVXVLKGNRAVEIVRKLVGPTSPHSAPPGTI 148 (195)
T ss_dssp ---------HHHHHHHHHH--HHHHHTSSCEEEEEEESTTHHHHHHHHHCCSCGGGSCTTSH
T ss_pred ---------CCCCCCCHHH--HHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf ---------1048863488--99999368746898746888999999958998465899971
No 216
>>3cmq_A Phenylalanyl-tRNA synthetase, mitochondrial; classii aarss fold, RRM domain, RNA recogntion, aminoacyl-tRNA synthetase, ATP-binding, ligase; HET: FA5; 2.20A {Homo sapiens} PDB: 3hfv_A* (A:37-307)
Probab=29.17 E-value=31 Score=15.61 Aligned_cols=22 Identities=0% Similarity=-0.007 Sum_probs=12.0
Q ss_pred HHHHHHHHHHCCCC--CCCEECHH
Q ss_conf 99999999877885--77300336
Q gi|255764463|r 183 VQEIRKKLDSHGHI--NVGIMPYV 204 (337)
Q Consensus 183 V~aIR~~Ld~~g~~--~~~ImsYs 204 (337)
+.+||+-|.++||. +||||+.+
T Consensus 18 ~~~iR~ff~~~gF~EV~TP~l~~~ 41 (271)
T 3cmq_A 18 KERVKEHFYKQYVGRFGTPLFSVY 41 (271)
T ss_dssp HHHHHHHHHHHHHHCSSSCCCEEE
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 999999998658631158664333
No 217
>>3js3_A 3-dehydroquinate dehydratase; AROD, covalent reaction intermediate, amino-acid biosynthesis, aromatic amino acid biosynthesis, lyase; HET: DHS; 2.20A {Clostridium difficile 630} (A:)
Probab=29.16 E-value=40 Score=14.86 Aligned_cols=171 Identities=16% Similarity=0.134 Sum_probs=83.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCC
Q ss_conf 88999999999999888936763302563345544542157653799999999973014479861332710011431001
Q gi|255764463|r 65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGIL 144 (337)
Q Consensus 65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~ 144 (337)
-+++.+..+++++...|+..|=|= ++ -..+ .+.-+-+.+.+..+|+..+++-+|.. +-++.+-|-.
T Consensus 29 ~~~~e~~~~~~~~~~~~~D~vElR--lD-~~~~------~~~~~~i~~~i~~lr~~~~~~PiI~T-----~R~~~eGG~~ 94 (258)
T 3js3_A 29 KNKKDIIKEAKELKDACLDIIEWR--VD-FFEN------VENIKEVKEVLYELRSYIHDIPLLFT-----FRSVVEGGEK 94 (258)
T ss_dssp SSHHHHHHHHHHHTTSSCSEEEEE--GG-GCTT------TTCHHHHHHHHHHHHHHHTTSCEEEE-----CCCGGGTCSC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEE--EE-CCCC------CCCHHHHHHHHHHHHHHCCCCCEEEE-----ECCHHHCCCC
T ss_conf 999999999999866599999997--42-3557------69899999999999973689878999-----7272208988
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCC-CCEEECCCCCCCHH-HHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCC
Q ss_conf 3654462899999999999999628-97352466767799-999999987788577300336664354301016753102
Q gi|255764463|r 145 CDGEIVNDETIELISHAAVIQADAG-ADIIAPSEMMDGRV-QEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTR 222 (337)
Q Consensus 145 ~~g~IdND~Tl~~L~k~Al~~A~AG-aDivAPSdMMDGrV-~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~ 222 (337)
... -.+=++.|. ..++.| +|+|-=---++..+ ..+.+..... ....|.||-
T Consensus 95 ~~s---~~~~~~~l~----~~~~~~~~d~iDiEl~~~~~~~~~l~~~~~~~--~~~iI~S~H------------------ 147 (258)
T 3js3_A 95 LIS---RDYYTTLNK----EISNTGLVDLIDVELFMGDEVIDEVVNFAHKK--EVKVIISNH------------------ 147 (258)
T ss_dssp CCC---HHHHHHHHH----HHHHTSCCSEEEEEGGGCHHHHHHHHHHHHHT--TCEEEEEEE------------------
T ss_pred CCC---HHHHHHHHH----HHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHC--CCEEEEEEC------------------
T ss_conf 899---899999999----99980894125888755389999999988755--987999954------------------
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHH-HCCCCEEEE-CC------CHHHHHHHHHHHHH-CCCCEEEEECC
Q ss_conf 4467777443157211478898888766-408987995-53------11458999999962-49989999346
Q gi|255764463|r 223 DLLKGDKKTYYLDPANVQEAIREASIDI-QESADMLLV-KP------GLPYLDVCFRIKEK-FGLPTFAYQVS 286 (337)
Q Consensus 223 p~~~gdr~sYQmd~~n~~eA~~e~~~D~-~EGAD~lMV-KP------a~~yLDii~~~k~~-~~~P~~aYqVS 286 (337)
.| +-.| ..+.+++...+. .-|||++=+ =+ .+..+.....++.. .+.|+.+|.-.
T Consensus 148 -~f-------~~tp--~~~~l~~~~~~~~~~gadivKia~~~~~~~D~~~l~~~~~~~~~~~~~~p~i~~~MG 210 (258)
T 3js3_A 148 -DF-------NKTP--KKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATNEMFKIYADRPIITMSMS 210 (258)
T ss_dssp -ES-------SCCC--CHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHTTCSSCBEEEECT
T ss_pred -CC-------CCCC--CHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf -69-------9998--999999999999974899589997139888999999999999850789988999679
No 218
>>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle; 2.00A {Geobacillus SP} (A:1-101,A:173-555)
Probab=29.13 E-value=40 Score=14.86 Aligned_cols=91 Identities=18% Similarity=0.205 Sum_probs=61.5
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC-----CCCCCCC-CHHHHHHHHHHHHHC-CCEEEECCCCCHHHC
Q ss_conf 889999999999998889367633025633455445-----4215765-379999999997301-447986133271001
Q gi|255764463|r 65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTG-----SHIIDPD-NLINEGICAIKKNIP-NIGIITDVALDPFTI 137 (337)
Q Consensus 65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~G-----seA~n~d-glv~rAIr~IK~~fp-dl~vi~DVcLc~YT~ 137 (337)
-....+.+.+..+.++|+++|-|-|..+.. .+..| -.+.||. |-...--..+++.-. .|-||.|+-
T Consensus 28 ~~~~~~~~~~~~~~~~g~~~~~l~p~~~~~-~~~~gy~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~v~~d~v------ 100 (484)
T 2ze0_A 28 GDLRGIIEKLDYLVELGVDIVWICPIYRSP-NADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDLV------ 100 (484)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEECC-CTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEE------
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEC------
T ss_conf 599999983699997599889979772699-9998978557777561239999999999999988898999989------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 143100136544628999999999999996289735
Q gi|255764463|r 138 HGHDGILCDGEIVNDETIELISHAAVIQADAGADII 173 (337)
Q Consensus 138 hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv 173 (337)
+.|.+-.+.+.+...-..+-|+|..
T Consensus 101 -----------~~NP~V~~~i~dil~~Wl~~GVDGf 125 (484)
T 2ze0_A 101 -----------IENSEVRQALYEMVNWWLDKGIDGF 125 (484)
T ss_dssp -----------CTCHHHHHHHHHHHHHHHHHTCCEE
T ss_pred -----------CCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf -----------4107899999888889997599743
No 219
>>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} (A:106-229)
Probab=29.03 E-value=17 Score=17.36 Aligned_cols=15 Identities=40% Similarity=0.324 Sum_probs=10.2
Q ss_pred HHCCCCCCCC----CCCCC
Q ss_conf 0011431001----36544
Q gi|255764463|r 135 FTIHGHDGIL----CDGEI 149 (337)
Q Consensus 135 YT~hGHcGi~----~~g~I 149 (337)
.|.+||||.- .||.|
T Consensus 48 sT~~G~CGlPiVs~~Dg~I 66 (124)
T 1lvm_A 48 QTKDGQCGSPLVSTRDGFI 66 (124)
T ss_dssp CCCTTCTTCEEEETTTCCE
T ss_pred ECCCCCCCCEEEECCCCEE
T ss_conf 0699986781588789959
No 220
>>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum} (A:130-359)
Probab=28.82 E-value=40 Score=14.82 Aligned_cols=68 Identities=10% Similarity=0.215 Sum_probs=45.5
Q ss_pred CCCEEECCCCCCCCCCCHHHHHHH-HHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEE
Q ss_conf 988110488878632889999999-9999988893676330256334554454215765379999999997301-44798
Q gi|255764463|r 50 EKTVESINSMPDVMRMSIDVAVEK-IKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGII 127 (337)
Q Consensus 50 ~~~k~~I~SMPGv~R~Sid~L~~e-ie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi 127 (337)
-..+++|+.--.+...+.+..+++ ++.+.+.|.++|-|=.+-. ..+ --.+.|+++++.+| ++.++
T Consensus 3 G~~r~~ip~~~~~~~~~~~e~~~~~~~~~~~~G~~~~Kik~g~~-~~~------------~d~~~i~~ir~~~g~~~~l~ 69 (230)
T 3i4k_A 3 GTVRDKVDVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKXGAG-DPA------------EDTRRVAELAREVGDRVSLR 69 (230)
T ss_dssp CCSCSEEEBCEEECSCCHHHHHHHHHHHHHHHCCSEEEEECCSS-CHH------------HHHHHHHHHHHTTTTTSEEE
T ss_pred CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEECCCCC-CHH------------HHHHHHHHHHHHHCCCEEEE
T ss_conf 86554441378621477277677778889873444110124789-979------------99999999999836640343
Q ss_pred ECC
Q ss_conf 613
Q gi|255764463|r 128 TDV 130 (337)
Q Consensus 128 ~DV 130 (337)
.|.
T Consensus 70 ~Da 72 (230)
T 3i4k_A 70 IDI 72 (230)
T ss_dssp EEC
T ss_pred ECC
T ss_conf 032
No 221
>>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} (A:)
Probab=28.72 E-value=41 Score=14.81 Aligned_cols=70 Identities=16% Similarity=0.147 Sum_probs=50.2
Q ss_pred CCCCCCCC-HHHHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 44315721-1478898888766408987995---5311458999999962499899993461899999999888978
Q gi|255764463|r 230 KTYYLDPA-NVQEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 230 ~sYQmd~~-n~~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
..|+...+ |..||+.... ++--|.+.+ =|++.-+++++.+++....|+...-..++-.....+-+.|..|
T Consensus 24 ~g~~v~~a~~~~eal~~l~---~~~~dlvilD~~lP~~~G~ell~~l~~~~~~p~I~~t~~~~~~~~~~~~~~G~~d 97 (121)
T 1zh2_A 24 DGMRVFEAETLQRGLLEAA---TRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADD 97 (121)
T ss_dssp TTCEEEEESSHHHHHHHHH---HHCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCSHHHHHHHHHHTCSE
T ss_pred CCCEEEEECCHHHHHHHHH---HCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHCCCCE
T ss_conf 7999999678899999998---2699889960345699738999999722577299998348999999999879989
No 222
>>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.70A {Burkholderia xenovorans LB400} PDB: 2oo6_A (A:111-380)
Probab=28.70 E-value=41 Score=14.81 Aligned_cols=161 Identities=11% Similarity=0.025 Sum_probs=90.9
Q ss_pred CCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCC------------CCCCCCCCCCCCCCH
Q ss_conf 11666758988110488878632889999999999998889367633025633------------455445421576537
Q gi|255764463|r 42 LPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMD------------LRNNTGSHIIDPDNL 109 (337)
Q Consensus 42 ~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~------------~Kd~~GseA~n~dgl 109 (337)
+|+.--=|-..+++++.-.....-+++...+.++++.+.|-..|-+-++-+.- ..|..|-..-+.-.+
T Consensus 9 ~Pv~~Llgg~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~Gf~~vki~~g~~~~~~~~f~~~~~n~r~d~~g~~~~~~~~~ 88 (270)
T 3go2_A 9 VPVYWSHCPTWRINHPKFFGPPVTDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRN 88 (270)
T ss_dssp EEEEECSTTHHHHHCTTTSSSCCCSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHH
T ss_pred CEEEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 23678704666666401127766776999999999997699889985044477642123554456777544323889999
Q ss_pred HHHHHHHHHHHHC-CCEEEECCCCC-----------------------HHHCCCCCCCCC---CCCCCHHHHHHHHHHHH
Q ss_conf 9999999997301-44798613327-----------------------100114310013---65446289999999999
Q gi|255764463|r 110 INEGICAIKKNIP-NIGIITDVALD-----------------------PFTIHGHDGILC---DGEIVNDETIELISHAA 162 (337)
Q Consensus 110 v~rAIr~IK~~fp-dl~vi~DVcLc-----------------------~YT~hGHcGi~~---~g~IdND~Tl~~L~k~A 162 (337)
....++.+++.++ +..++.|.--. |.-+..++..+. .-.|--++++.......
T Consensus 89 ~~~~~~~~r~~~g~~~~~~~d~~~~~~~~ea~~~~~~l~~~~~~~~e~p~~~~~~~~~~~~~~~~pi~~~e~~~~~~~~~ 168 (270)
T 3go2_A 89 LRAHLEALRDGAGPDVEILLDLNFNAKPEGYLKILRELADFDLFWVEIDSYSPQGLAYVRNHSPHPISSCETLFGIREFK 168 (270)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSCCSEEECCCSCHHHHHHHHHTCSSCEEECTTCCHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCEECCCEECCCHHHH
T ss_conf 99999999997399927997214234433104677877523402663023321455564223898602250331502432
Q ss_pred HHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECH
Q ss_conf 99996289735246676779999999998778857730033
Q gi|255764463|r 163 VIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPY 203 (337)
Q Consensus 163 l~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsY 203 (337)
-...+..+|++-|--.+=|-....|-+-.... .++.++.+
T Consensus 169 ~~~~~~~~d~~~~~~~~GG~~~~~~~~~~a~~-~gi~~~~h 208 (270)
T 3go2_A 169 PFFDANAVDVAIVDTIWNGVWQSMKIAAFADA-HDINVAPH 208 (270)
T ss_dssp HHHHTTCCSEEEECHHHHCHHHHHHHHHHHHH-TTCEEEEC
T ss_pred HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH-CCCEEEEC
T ss_conf 24554035510455554771079999999998-79979976
No 223
>>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} (A:1-96,A:218-491)
Probab=28.68 E-value=41 Score=14.81 Aligned_cols=75 Identities=24% Similarity=0.260 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHCC-CEEEECCCCCH----HHCCCCCCCCCC---CCC--------CHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf 799999999973014-47986133271----001143100136---544--------62899999999999999628973
Q gi|255764463|r 109 LINEGICAIKKNIPN-IGIITDVALDP----FTIHGHDGILCD---GEI--------VNDETIELISHAAVIQADAGADI 172 (337)
Q Consensus 109 lv~rAIr~IK~~fpd-l~vi~DVcLc~----YT~hGHcGi~~~---g~I--------dND~Tl~~L~k~Al~~A~AGaDi 172 (337)
.+...++.+|..++. ..++.+|.--+ --+.|=|+|+-. +-+ .-..++..+.+.+......+.-+
T Consensus 139 ~~~~~~~~i~~~~~~~~~v~~~V~t~e~A~~a~~aGaD~i~V~g~~ggg~~~~~~~~~~~p~~~~~~~~~~~~~~~~iPV 218 (370)
T 1zfj_A 139 GVLRKIAEIRAHFPNRTLIAGNIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTI 218 (370)
T ss_dssp HHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCEEEEEEEECEECCCCCEECCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf 04678898763057776389972549999999984746066424402000340010653117899999999898579818
Q ss_pred EECCCCCCCHH
Q ss_conf 52466767799
Q gi|255764463|r 173 IAPSEMMDGRV 183 (337)
Q Consensus 173 vAPSdMMDGrV 183 (337)
||--...+|+=
T Consensus 219 IAaGGI~~~~d 229 (370)
T 1zfj_A 219 IADGGIKYSGD 229 (370)
T ss_dssp EEESCCCSHHH
T ss_pred EECCCCCCCCC
T ss_conf 96044244773
No 224
>>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} (B:)
Probab=28.62 E-value=41 Score=14.80 Aligned_cols=72 Identities=18% Similarity=0.162 Sum_probs=54.8
Q ss_pred CCC-CCC-CHHHHHHHHHHHHHH--CCCCEEEE---CCCHHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHHHHCCCC
Q ss_conf 431-572-114788988887664--08987995---5311458999999962--49989999346189999999988897
Q gi|255764463|r 231 TYY-LDP-ANVQEAIREASIDIQ--ESADMLLV---KPGLPYLDVCFRIKEK--FGLPTFAYQVSGEYAMIKAASLQGWI 301 (337)
Q Consensus 231 sYQ-md~-~n~~eA~~e~~~D~~--EGAD~lMV---KPa~~yLDii~~~k~~--~~~P~~aYqVSGEYami~~a~~~g~~ 301 (337)
.|+ .+. .|..||+.....-.. +.-|++++ -|++.-+++++.+|+. ...|+....-+++-.....+-+.|.-
T Consensus 26 g~~~v~~a~~g~eal~~~~~~~~~~~~~dliilD~~lp~~dG~el~~~ir~~~~~~~pii~lt~~~~~~~~~~~~~~G~~ 105 (133)
T 2r25_B 26 GIENIELACDGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVALTAFADDSNIKECLESGMN 105 (133)
T ss_dssp TCCCEEEESSHHHHHHHHHHHHHHTCCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEEESCCSHHHHHHHHHTTCS
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCC
T ss_conf 99599985233899999997652257853776533289975999999998568999779999787999999999986998
Q ss_pred C
Q ss_conf 8
Q gi|255764463|r 302 N 302 (337)
Q Consensus 302 d 302 (337)
+
T Consensus 106 ~ 106 (133)
T 2r25_B 106 G 106 (133)
T ss_dssp E
T ss_pred E
T ss_conf 9
No 225
>>3d23_B 3C-like proteinase; main protease, ATP-binding, cytoplasm, endonuclease, exonuclease, helicase, hydrolase, membrane, metal-binding; HET: 3IH; 2.50A {Human coronavirus HKU1} (B:1-190)
Probab=27.99 E-value=10 Score=18.92 Aligned_cols=12 Identities=75% Similarity=1.591 Sum_probs=5.8
Q ss_pred HHHHHHCCHHHH
Q ss_conf 435430101675
Q gi|255764463|r 207 FNSSFYGPYRDA 218 (337)
Q Consensus 207 faS~fYgPFRdA 218 (337)
|.-.|||||.||
T Consensus 179 ~~G~fYG~y~D~ 190 (190)
T 3d23_B 179 FTGNFYGPYRDA 190 (190)
T ss_dssp TTSCBSTTCCSS
T ss_pred CCCEECCCCCCC
T ss_conf 575340674574
No 226
>>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, alternative splicing, disease mutation, glycosyltransferase, lyase; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3ewy_A* 3ewx_A* ... (A:)
Probab=27.85 E-value=42 Score=14.71 Aligned_cols=96 Identities=9% Similarity=-0.062 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCC--------------C-CCCCHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 999999999730144798613327100114310013--------------6-5446289999999999999962897352
Q gi|255764463|r 110 INEGICAIKKNIPNIGIITDVALDPFTIHGHDGILC--------------D-GEIVNDETIELISHAAVIQADAGADIIA 174 (337)
Q Consensus 110 v~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~--------------~-g~IdND~Tl~~L~k~Al~~A~AGaDivA 174 (337)
...+++.+++.- +...+.|+-+.+|...|+.++-. | ...|...|+...+......+++|||+|.
T Consensus 43 ~~~~l~~~~~~~-~~i~~~~~g~~~~~~~G~~~i~~l~~~~~~~~~~vi~D~k~~Di~~~~~~~~~~i~~~~~~Gad~vt 121 (260)
T 3eww_A 43 ARELLQLADALG-PSICMLKTHVDILNDFTLDVMKELITLAKCHEFLIFENRKFADIGNTVKKQYEGGIFKIASWADLVN 121 (260)
T ss_dssp HHHHHHHHHHHG-GGCSEEEECGGGCTTCCHHHHHHHHHHHHHHTCEEEEEEEECSCHHHHHHHHHCTTTCGGGTCSEEE
T ss_pred HHHHHHHHHHHC-CCCCEEEECHHHHHCCCHHHHHHHHHHHHHCCCEEECCCEECCCCHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 999999999857-8462999898998157789999999987615961306864469547899999987630244341355
Q ss_pred CCCC-CCCHHHHHHHHHHHCCCCCCCEECHHHH
Q ss_conf 4667-6779999999998778857730033666
Q gi|255764463|r 175 PSEM-MDGRVQEIRKKLDSHGHINVGIMPYVAK 206 (337)
Q Consensus 175 PSdM-MDGrV~aIR~~Ld~~g~~~~~ImsYsaK 206 (337)
-..- -..-+..+++.-+..+..-..+.+.+..
T Consensus 122 v~~~~g~~~~~~~~~~~~~~~~~~~~l~~t~~~ 154 (260)
T 3eww_A 122 AHVVPGSGVVKGLQEVGLPLHRGCLLIAEMSST 154 (260)
T ss_dssp EESTTCTHHHHHHHHHHTTTTCEEEEECCCCST
T ss_pred EECCCCHHHHHHHHHHHHCCCCCCEEEEEECHH
T ss_conf 414552699999997511136552478740445
No 227
>>1u83_A Phosphosulfolactate synthase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, lyase; 2.20A {Bacillus subtilis} (A:)
Probab=27.23 E-value=40 Score=14.84 Aligned_cols=66 Identities=15% Similarity=0.172 Sum_probs=38.2
Q ss_pred HHCCCCEEECCCCC-----CCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCC---CCCCCCCC
Q ss_conf 96289735246676-----77999999999877885773003366643543010167531024467777---44315721
Q gi|255764463|r 166 ADAGADIIAPSEMM-----DGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDK---KTYYLDPA 237 (337)
Q Consensus 166 A~AGaDivAPSdMM-----DGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr---~sYQmd~~ 237 (337)
.+-|.|.|--||=. |-+...||++ .++|. ++| .+ |.| +..++++
T Consensus 120 k~lGf~~IEiS~G~i~l~~~~~~~~I~~~--~~~f~---v~s---------------------Ev-G~Kd~~~~~~~~~- 171 (276)
T 1u83_A 120 TYFGCEYIEISNGTLPXTNKEKAAYIADF--SDEFL---VLS---------------------EV-GSKDAELASRQSS- 171 (276)
T ss_dssp HHTTCSEEEECCSSSCCCHHHHHHHHHHH--TTTSE---EEE---------------------EC-SCCC------CCS-
T ss_pred HHCCCCEEEECCCCCCCCHHHHHHHHHHH--HHCCE---ECC---------------------CC-CCCCCCCCCCCCH-
T ss_conf 98699889977985108999999999999--96792---045---------------------45-7767654678899-
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 147889888876640898799553
Q gi|255764463|r 238 NVQEAIREASIDIQESADMLLVKP 261 (337)
Q Consensus 238 n~~eA~~e~~~D~~EGAD~lMVKP 261 (337)
.+-++.+..|.+-|||+|||.-
T Consensus 172 --~~~I~~~~~~LeAGA~~ViiEa 193 (276)
T 1u83_A 172 --EEWLEYIVEDXEAGAEKVITEA 193 (276)
T ss_dssp --THHHHHHHHHHHHTEEEEEEC-
T ss_pred --HHHHHHHHHHHHCCCCEEEEEC
T ss_conf --9999999999976985899962
No 228
>>2izo_A FEN1, flap structure-specific endonuclease; hydrolase, DNA repair, DNA-binding, endonuclease, metal-binding, excision repair, DNA replication, PCNA; HET: DNA; 2.9A {Sulfolobus solfataricus} (A:1-208,A:301-346)
Probab=27.08 E-value=25 Score=16.24 Aligned_cols=40 Identities=10% Similarity=0.191 Sum_probs=28.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
Q ss_conf 8786328899999999999988893676330256334554
Q gi|255764463|r 59 MPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNN 98 (337)
Q Consensus 59 MPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~ 98 (337)
--|.+.--+..+...+..+.+.||.-|.+|-+.++..|..
T Consensus 47 ~gg~~~~~l~~i~~~l~~L~~~~I~pVfVFDG~~~~~K~~ 86 (254)
T 2izo_A 47 SQGRVTSHLSGLFYRTINILEEGVIPIYVFDGKPPEQKSE 86 (254)
T ss_dssp SSSCBCHHHHHHHHHHHHHHHHTEEEEEEECC--------
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHH
T ss_conf 8998646999999999999867992699981789841001
No 229
>>2w00_A HSDR, R.ECOR124I; ATP-binding, DNA-binding, restriction system, plasmid, helicase, hydrolase, nucleotide-binding; HET: ATP; 2.6A {Escherichia coli} (A:726-794)
Probab=27.03 E-value=41 Score=14.80 Aligned_cols=17 Identities=24% Similarity=0.479 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHCCCCE
Q ss_conf 45899999996249989
Q gi|255764463|r 264 PYLDVCFRIKEKFGLPT 280 (337)
Q Consensus 264 ~yLDii~~~k~~~~~P~ 280 (337)
-|+|+|.++.++|++|.
T Consensus 26 GY~~~v~EL~~kFP~~~ 42 (69)
T 2w00_A 26 GFXTVVSELEQRFPDPT 42 (69)
T ss_dssp CHHHHHHHHHHHCCCSS
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 78778899998654343
No 230
>>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, hydrolase; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* (A:206-619)
Probab=26.88 E-value=44 Score=14.60 Aligned_cols=153 Identities=10% Similarity=0.042 Sum_probs=79.0
Q ss_pred HCCCCEEEE---CCCCCEEECCCCCCCCC----CCHHHHHHHHHHHHHCCCCEEEEEECCCCCC-----CCCCCCCCCCC
Q ss_conf 733116667---58988110488878632----8899999999999988893676330256334-----55445421576
Q gi|255764463|r 39 DLILPIFLT---SGEKTVESINSMPDVMR----MSIDVAVEKIKQVADLGIPAIAIFPNIPMDL-----RNNTGSHIIDP 106 (337)
Q Consensus 39 dLI~PiFV~---eg~~~k~~I~SMPGv~R----~Sid~L~~eie~~~~lGI~av~LFp~I~~~~-----Kd~~GseA~n~ 106 (337)
-.||=|||. .+.....+........+ -.+..+.+.+..+.+|||++|-|=|+.+... +.....+-|+.
T Consensus 10 ~~iY~i~~~~f~~~~~~~~~~~~~~~~~~~~~~gd~~g~~~~ldyl~~lGv~~i~l~Pi~~~~~~~~~~~~~~~~~gY~~ 89 (414)
T 2e8y_A 10 AVIYETHLRDFSIHENSGMINKGKYLALTETDTQTANGSSSGLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWGYNP 89 (414)
T ss_dssp CCEEEECHHHHHHSTTSCCSSTTSGGGGGCTTCBCTTSCBCHHHHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCCCSE
T ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 77998645201358999867788640100134543334133417999758777996886356874345777777877575
Q ss_pred CCH--------------------HHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCC---------------------
Q ss_conf 537--------------------999999999730144798613327100114310013---------------------
Q gi|255764463|r 107 DNL--------------------INEGICAIKKNIPNIGIITDVALDPFTIHGHDGILC--------------------- 145 (337)
Q Consensus 107 dgl--------------------v~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~--------------------- 145 (337)
.++ ..+.|++++++ .|-||.|+-+-......+.+...
T Consensus 90 ~d~~~~~~~~~~~~~~~~Gt~e~~~~li~~~h~~--gi~vi~D~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (414)
T 2e8y_A 90 LHFFAPEGSYASNPHDPQTRKTELKQMINTLHQH--GLRVILDVVFNHVYKRENSPFEKTVPGYFFRHDECGKPSNGTGV 167 (414)
T ss_dssp EEEEEECSTTSSCSSSHHHHHHHHHHHHHHHHHT--TCEEEEEECTTCCSSGGGSHHHHHSTTTSBCBCTTSSBCCTTSS
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 7231326652357455444299999999999977--99999963202343656674436779731004778788788876
Q ss_pred --CC-CCCHHHHHHHHHHHHHHHHHCCCCE---EECCCCCCCHHHHHHHHHHHC
Q ss_conf --65-4462899999999999999628973---524667677999999999877
Q gi|255764463|r 146 --DG-EIVNDETIELISHAAVIQADAGADI---IAPSEMMDGRVQEIRKKLDSH 193 (337)
Q Consensus 146 --~g-~IdND~Tl~~L~k~Al~~A~AGaDi---vAPSdMMDGrV~aIR~~Ld~~ 193 (337)
.. .-.+...-..+....--..+-|+|. -+...+...-...++..+...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~gvDgfR~D~~~~~~~~~~~~~~~~~~~~ 221 (414)
T 2e8y_A 168 GNDIASERRMARKFIADCVVYWLEEYNVDGFRFDLLGILDIDTVLYMKEKATKA 221 (414)
T ss_dssp SCCBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSBHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCC
T ss_conf 443476774666776651232000036751433001202220043322102234
No 231
>>2dqw_A Dihydropteroate synthase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.65A {Thermus thermophilus HB8} PDB: 2dza_A* 2dzb_A* (A:)
Probab=26.64 E-value=44 Score=14.57 Aligned_cols=201 Identities=14% Similarity=0.067 Sum_probs=97.9
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC---HHHHHHHHHHHHHCCCEEEECCCCCHHHCCC
Q ss_conf 3288999999999999888936763302563345544542157653---7999999999730144798613327100114
Q gi|255764463|r 63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDN---LINEGICAIKKNIPNIGIITDVALDPFTIHG 139 (337)
Q Consensus 63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dg---lv~rAIr~IK~~fpdl~vi~DVcLc~YT~hG 139 (337)
...+.+.+++.+++..+.|-.-+=+=. .+ +..|.+...++. -+..+|+.+++.- +. +++|.|...=
T Consensus 47 ~~~~~~~~~~~a~~~~~~GAdiIDig~-~s----t~pg~~~i~~~ee~~rl~~~i~~i~~~~--~p----isIDT~~~~v 115 (294)
T 2dqw_A 47 RYLDPERALERAREMVAEGADILDLGA-ES----TRPGAAPVPVEEEKRRLLPVLEAVLSLG--VP----VSVDTRKPEV 115 (294)
T ss_dssp ------CCHHHHHHHHHHTCSEEEEEC-C---------------CCHHHHHHHHHHHHHTTC--SC----EEEECSCHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEC-CC----CCCCCCCCHHHHHHHHCCCHHHHHCCCC--CE----ECHHHHHHHH
T ss_conf 688999999999999986998899604-13----3443321104566652251154420334--30----0430123999
Q ss_pred CCCCCCC-CCCCHHHHHHHHHHHHHHHHHCCCCEEECC------CCCCCH------HHHH----H---HHHHHCCCCCC-
Q ss_conf 3100136-544628999999999999996289735246------676779------9999----9---99987788577-
Q gi|255764463|r 140 HDGILCD-GEIVNDETIELISHAAVIQADAGADIIAPS------EMMDGR------VQEI----R---KKLDSHGHINV- 198 (337)
Q Consensus 140 HcGi~~~-g~IdND~Tl~~L~k~Al~~A~AGaDivAPS------dMMDGr------V~aI----R---~~Ld~~g~~~~- 198 (337)
.---+.. -.|.||.|-+..-++.-..++.|+-+|..- .+|..| +..| - ..+-..|..++
T Consensus 116 ~e~al~~G~~iINsisg~~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~~~~~~g~~~Ii 195 (294)
T 2dqw_A 116 AEEALKLGAHLLNDVTGLRDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVPQVV 195 (294)
T ss_dssp HHHHHHHTCSEEECSSCSCCHHHHHHHHHHTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCSCEE
T ss_pred HHHHHHCCCCEEECCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 99999619778844653321467788764056302302225872211221123310788999999999999987996699
Q ss_pred ---CEECHHHHHH--HHHHCCHHHHHHCCCCCCC-CCCCCC------CCCCHHHHH-HHHHHHHHHCCCCEEEECCCHHH
Q ss_conf ---3003366643--5430101675310244677-774431------572114788-98888766408987995531145
Q gi|255764463|r 199 ---GIMPYVAKFN--SSFYGPYRDAISTRDLLKG-DKKTYY------LDPANVQEA-IREASIDIQESADMLLVKPGLPY 265 (337)
Q Consensus 199 ---~ImsYsaKfa--S~fYgPFRdA~~S~p~~~g-dr~sYQ------md~~n~~eA-~~e~~~D~~EGAD~lMVKPa~~y 265 (337)
++........ -.++.=.|-..--.|.+.| .|+|+- .+++.+..+ ..-...-..-|++++.+-+--..
T Consensus 196 iDPg~~~~~~~~~~~~~~~~l~~~~~~~~pil~G~Snksf~~~~~~~~~~~~r~~~t~~~~~~~~~~g~~iir~h~v~~~ 275 (294)
T 2dqw_A 196 LDPGFGFGKLLEHNLALLRRLDEIVALGHPVLVGLSRKRTIGELSGVEDPAQRVHGSVAAHLFAVMKGVRLLRVHDVRAH 275 (294)
T ss_dssp EECCTTSSCCHHHHHHHHHTHHHHHTTSSCBEECCTTCHHHHHHHTCCSGGGCHHHHHHHHHHHHHTTCCEEEESCHHHH
T ss_pred EECCCCCCCCHHHHHHHHHCCHHHCCCCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHH
T ss_conf 72688845311434999835033236677279873356777876379986876688999999999879999995898999
Q ss_pred HHHHHHHHH
Q ss_conf 899999996
Q gi|255764463|r 266 LDVCFRIKE 274 (337)
Q Consensus 266 LDii~~~k~ 274 (337)
.+++.-...
T Consensus 276 ~~~~~~~~~ 284 (294)
T 2dqw_A 276 REALGVWEA 284 (294)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 999999999
No 232
>>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} (A:)
Probab=26.57 E-value=44 Score=14.56 Aligned_cols=22 Identities=9% Similarity=0.336 Sum_probs=12.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 8999999999999888936763
Q gi|255764463|r 66 SIDVAVEKIKQVADLGIPAIAI 87 (337)
Q Consensus 66 Sid~L~~eie~~~~lGI~av~L 87 (337)
+.+.+.+.++++...|..++.+
T Consensus 17 t~~~~~~~~~~a~~~~~~~~~~ 38 (220)
T 1ub3_A 17 TLEEVAKAAEEALEYGFYGLCI 38 (220)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEC
T ss_pred CHHHHHHHHHHHHHHCCCEEEE
T ss_conf 9999999999999869948998
No 233
>>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A (B:214-352)
Probab=26.43 E-value=44 Score=14.55 Aligned_cols=50 Identities=4% Similarity=0.078 Sum_probs=40.4
Q ss_pred EEECCCCCCCHHHHHHHHHHHCCCC--CCCEECHHHHHHHHHHCCHHHHHHC
Q ss_conf 3524667677999999999877885--7730033666435430101675310
Q gi|255764463|r 172 IIAPSEMMDGRVQEIRKKLDSHGHI--NVGIMPYVAKFNSSFYGPYRDAIST 221 (337)
Q Consensus 172 ivAPSdMMDGrV~aIR~~Ld~~g~~--~~~ImsYsaKfaS~fYgPFRdA~~S 221 (337)
+|=|..+-.|.++.|-+.+.++||. ..-.+..+--.+..||.++.+..-.
T Consensus 28 iIKPda~~~~~~~~Ii~~i~~~Gf~I~~~k~~~l~~e~a~~~Y~~~~~~l~~ 79 (139)
T 3bh7_B 28 VLFAGDYTIANARKLIDEMVGKGFFLVQTKEVSMKAEDAQRVFREKAPDFLP 79 (139)
T ss_dssp EECCSTTHHHHHHHHHHHHHHTTCEEEEEEEECCCHHHHHHHHGGGGGGTGG
T ss_pred EEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCHHHHHH
T ss_conf 9825302246699999998638828998522347989999988621788887
No 234
>>3kp1_A D-ornithine aminomutase E component; 5 aminomutase (OAM); HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_A* 3koy_A* 3koz_A* 3kp0_A* 3kox_A* (A:63-455)
Probab=26.36 E-value=45 Score=14.54 Aligned_cols=15 Identities=33% Similarity=0.242 Sum_probs=7.8
Q ss_pred HHHHHHHHCCCCEEE
Q ss_conf 999999962897352
Q gi|255764463|r 160 HAAVIQADAGADIIA 174 (337)
Q Consensus 160 k~Al~~A~AGaDivA 174 (337)
.||..-|..|||+||
T Consensus 30 ~qaraAA~~GAD~Ia 44 (393)
T 3kp1_A 30 RRMRMAAWHGADHIM 44 (393)
T ss_dssp HHHHHHHHTTCCEEE
T ss_pred HHHHHHHHCCCCEEE
T ss_conf 999999874898899
No 235
>>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} (A:127-412)
Probab=26.35 E-value=45 Score=14.54 Aligned_cols=95 Identities=17% Similarity=0.274 Sum_probs=52.3
Q ss_pred HHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCC---HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
Q ss_conf 8899986347788877331166675898811048887863288---9999999999998889367633025633455445
Q gi|255764463|r 24 NWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMS---IDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTG 100 (337)
Q Consensus 24 ~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~S---id~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~G 100 (337)
+.++.|+..-.=+.=+|+|-| +.|.+. ++| +..|...++.+.++|+++|+||- ++- +..+
T Consensus 60 ~~l~~L~~~~~~~~v~Fv~ai--sPG~~~-----------~~s~ed~~~L~~K~~ql~~lGvr~Failf---DDi-~~~~ 122 (286)
T 2cho_A 60 AQLQELVAVANENEVDFVWAI--HPGQDI-----------KWNKEDRDLLLAKFEKMYQLGVRSFAVFF---DDI-SGEG 122 (286)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE--CCTTTC-----------CSSHHHHHHHHHHHHHHHHTTCCEEEEEC---CSC-CSGG
T ss_pred HHHHHHHHHHHHCCCCEEEEE--CCCCCC-----------CCCHHHHHHHHHHHHHHHHCCCCEEEEEC---CCC-CCCC
T ss_conf 999999999986688379985--587545-----------66889999999999999966998899964---479-9876
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCC--CEEEECCCCCHHHCC
Q ss_conf 42157653799999999973014--479861332710011
Q gi|255764463|r 101 SHIIDPDNLINEGICAIKKNIPN--IGIITDVALDPFTIH 138 (337)
Q Consensus 101 seA~n~dglv~rAIr~IK~~fpd--l~vi~DVcLc~YT~h 138 (337)
..+-..-.++.+..+.+++.-++ -+++| =-+|..+
T Consensus 123 ~~~~~qa~l~n~v~~~l~~~~~~~~~l~~c---Pt~Y~~~ 159 (286)
T 2cho_A 123 TNPQKQAELLNYIDEKFAQVKPDINQLVMC---PTEYNKS 159 (286)
T ss_dssp GCHHHHHHHHHHHHHHTTTTSSSCCCEEEE---CSSCSGG
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCEEEEE---CHHHHCC
T ss_conf 467899999999999988747998728998---9244457
No 236
>>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8} (A:1-112)
Probab=26.31 E-value=45 Score=14.53 Aligned_cols=66 Identities=14% Similarity=0.180 Sum_probs=40.0
Q ss_pred CCCCCC-CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf 488878-63288999999999999888936763302563345544542157653799999999973014479
Q gi|255764463|r 56 INSMPD-VMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGI 126 (337)
Q Consensus 56 I~SMPG-v~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~v 126 (337)
++..-| ....|++.+++|++.+.+.|++.|.++.. + =...+....+... +-.-++.+.+..+...+
T Consensus 23 ~~~~~g~~r~r~~~~v~~ei~~l~~~g~~~i~~~~~---~-~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~ 89 (112)
T 2qgq_A 23 IPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQ---D-TTSYGIDLYRKQA-LPDLLRRLNSLNGEFWI 89 (112)
T ss_dssp -----CCCCBCCHHHHHHHHHHHHHTTCCEEEEECT---T-GGGTTHHHHSSCC-HHHHHHHHHTSSSSCEE
T ss_pred EEEEECCEEEECHHHHHHHHHHHHHCCCCEEEEEEE---C-CCCCCCCCCCCCC-HHHHHHHHHCCCCCCCC
T ss_conf 421229728709999999999999879968999850---3-6645542334432-78887655303441101
No 237
>>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} (A:)
Probab=26.20 E-value=45 Score=14.52 Aligned_cols=133 Identities=17% Similarity=0.082 Sum_probs=71.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC---CCCHHHCCCCCC
Q ss_conf 89999999999998889367633025633455445421576537999999999730144798613---327100114310
Q gi|255764463|r 66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDV---ALDPFTIHGHDG 142 (337)
Q Consensus 66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DV---cLc~YT~hGHcG 142 (337)
+++...+-++.+.+.|..+|.+=.... +.....++..+....=..+-++...+++ .|.+++++ ---+|-...-+-
T Consensus 34 ~~e~A~~li~~a~~~gad~Vkfq~~~~-~~~~s~~~~~~~~~~~~~~~l~~~~~~~-Gi~~~~t~~d~~~~~~l~~~v~~ 111 (292)
T 1o60_A 34 AXQVCEAYVKVTEKLGVPYVFKASFDK-ANRSSIHSYRGPGXEEGLKIFQELKDTF-GVKIITDVHEIYQCQPVADVVDI 111 (292)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEESCC-TTCSSTTSCCCSCHHHHHHHHHHHHHHH-CCEEEEECCSGGGHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 999999999999983989699567678-6515665355535689999999998722-87602034417899999985146
Q ss_pred CC-CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC-C-CHHHHHHHHHHHCCCCCCCEECHHHHH
Q ss_conf 01-36544628999999999999996289735246676-7-799999999987788577300336664
Q gi|255764463|r 143 IL-CDGEIVNDETIELISHAAVIQADAGADIIAPSEMM-D-GRVQEIRKKLDSHGHINVGIMPYVAKF 207 (337)
Q Consensus 143 i~-~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMM-D-GrV~aIR~~Ld~~g~~~~~ImsYsaKf 207 (337)
+- .-..+.|..-++.++ ..|.=++-=|..| + .-+...-+.+..+|..++.+|--.+.|
T Consensus 112 ~kI~S~~~~n~~ll~~~a-------~~~~Pvilk~~~~~s~~ei~~A~~~i~~~Gn~~~~l~~cgs~y 172 (292)
T 1o60_A 112 IQLPAFLARQTDLVEAXA-------KTGAVINVKKPQFLSPSQXGNIVEKIEECGNDKIILCDRGTNF 172 (292)
T ss_dssp EEECGGGTTCHHHHHHHH-------HTTCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEEC
T ss_pred HEECHHHHCHHHHHHHHH-------HHCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCC
T ss_conf 256663313299999999-------8399568516887889999999999996399841343432467
No 238
>>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A (A:1-128)
Probab=25.85 E-value=33 Score=15.44 Aligned_cols=71 Identities=17% Similarity=0.115 Sum_probs=53.5
Q ss_pred CCCCCCCCC-HHHHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 744315721-1478898888766408987995---53114589999999624-99899993461899999999888978
Q gi|255764463|r 229 KKTYYLDPA-NVQEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 229 r~sYQmd~~-n~~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
+..||...+ |..+|+.... ++--|++.+ =|++.-+++++.+|+.. .+|+..+--.++......+.+.|..+
T Consensus 22 ~~g~~v~~a~s~~~al~~l~---~~~~dliilD~~lp~~dG~el~~~ir~~~~~~piivlt~~~~~~~~~~~~~~G~~~ 97 (128)
T 3dzd_A 22 EEGYHPDTAKTLREAEKKIK---ELFFPVIVLDVWXPDGDGVNFIDFIKENSPDSVVIVITGHGSVDTAVKAIKKGAYE 97 (128)
T ss_dssp HTTCEEEEESSHHHHHHHHH---HBCCSEEEEESEETTEETTTHHHHHHHHCTTCEEEEEECSSCCHHHHHHHHHTCCE
T ss_pred HCCCEEEEECCHHHHHHHHH---HCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCE
T ss_conf 77998999799999999987---17999999979899999999999999639987544556779999999999748763
No 239
>>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54} (A:143-377)
Probab=25.73 E-value=46 Score=14.46 Aligned_cols=65 Identities=11% Similarity=0.010 Sum_probs=44.4
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEECC
Q ss_conf 1104888786328899999999999988893676330256334554454215765379999999997301--44798613
Q gi|255764463|r 53 VESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP--NIGIITDV 130 (337)
Q Consensus 53 k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp--dl~vi~DV 130 (337)
++.|+.---+.-.+.+.+.++++...+.|.++|-+=.+.+.-.+| .+-|+++++.+| ++.++.|.
T Consensus 7 r~~v~~y~s~~~~~~~~~~~~~~~~~~~G~~~~KikvG~~~~~~d-------------~~~i~avr~~~g~~~~~l~~Da 73 (235)
T 2pge_A 7 EKRIPVNGLIWMGEAAFMQEQIEAKLAEGYGCLKLKIGAIDFDKE-------------CALLAGIRESFSPQQLEIRVDA 73 (235)
T ss_dssp SCCEEBCEEECCCCHHHHHHHHHHHHHTTCSEEEEEC---CHHHH-------------HHHHHHHHHHSCTTTCEEEEEC
T ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHH-------------HHHHHHHHHHHCCCCCCHHHHC
T ss_conf 886147764135676899999999985798538624333326889-------------9999987766444551243411
No 240
>>2p10_A MLL9387 protein; NP_085906.1, hypothetical protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti MAFF303099} (A:1-261)
Probab=25.42 E-value=43 Score=14.62 Aligned_cols=199 Identities=10% Similarity=-0.021 Sum_probs=85.3
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCC
Q ss_conf 58563128988999863477888773311666758988110488878632889999999999998889367633025633
Q gi|255764463|r 15 RRMRRNRKSNWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMD 94 (337)
Q Consensus 15 ~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~ 94 (337)
.++.+....+.+|+|.++... ++ +|++|-. + ..+-+.+.|...+.+-......
T Consensus 9 ~~~~~~~~~~~l~~l~~~~~~----i~-----------------~~~a~D~----~--sA~~~e~aG~dai~~s~~~~~~ 61 (261)
T 2p10_A 9 KRPTRSELVDRFQKKIRAGEP----II-----------------GGGAGTG----L--SAKSEEAGDIDLIVIYNSGRYR 61 (261)
T ss_dssp CCCCHHHHHHHHHHHHHTTCC----EE-----------------EEEESSH----H--HHHHHHHTTCSEEEECHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCC----EE-----------------EECCHHH----H--HHHHHHHCCCCEEEECCCHHHH
T ss_conf 646799999999999857997----89-----------------8422008----8--8999996698699750719998
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 45544542157653799999999973014479861332710011431001365446289999999999999962897352
Q gi|255764463|r 95 LRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIA 174 (337)
Q Consensus 95 ~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA 174 (337)
..--.-...+.....+.+..+..... ++-|++|. +.|+..-..++-.+-..|++.| .++||.-|-
T Consensus 62 ~~g~~~~~~l~~~~~~~~~~~~~~~~--~~pviaD~------~~G~~~~~~~~~~nv~r~vr~l-------~~aGa~gv~ 126 (261)
T 2p10_A 62 XAGRGSLAGLLAYGNANQIVVDXARE--VLPVVRHT------PVLAGVNGTDPFXVXSTFLREL-------KEIGFAGVQ 126 (261)
T ss_dssp HTTCCGGGGGBTEEEHHHHHHHHHHH--HGGGCSSS------CEEEEECTTCTTCCHHHHHHHH-------HHHTCCEEE
T ss_pred HCCCCCHHHCCCHHHHHHHHHHHHHH--HCCCCCCC------CEEECCCCCCHHHHHHHHHHHH-------HHCCCCEEE
T ss_conf 75797431144400489999999865--41011578------7540457867254599999999-------976974564
Q ss_pred CCCC---CCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 4667---6779999999998778857730033666435430101675310244677774431572114788988887664
Q gi|255764463|r 175 PSEM---MDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQ 251 (337)
Q Consensus 175 PSdM---MDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~ 251 (337)
--|- ++|....-++. .. ..-. .=--++++|-.-. | . ..-..|++..+....+
T Consensus 127 iEd~~~~~~~~~~~~~~~-----~~---~~~~------~~~~~~~~ar~~~--~----~-----~~~~~eai~ra~a~~e 181 (261)
T 2p10_A 127 NFPTVGLIDGLFRQNLEE-----TG---XSYA------QEVEXIAEAHKLD--L----L-----TTPYVFSPEDAVAXAK 181 (261)
T ss_dssp ECSCGGGCCHHHHHHHHH-----TT---CCHH------HHHHHHHHHHHTT--C----E-----ECCEECSHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHH-----HC---CCCH------HHHHHHHHHHHCC--C----C-----CCCCCCCHHHHHHHHH
T ss_conf 367545314443312887-----55---8711------7899999999737--6----4-----3122489999999997
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 089879955311458999999962499899
Q gi|255764463|r 252 ESADMLLVKPGLPYLDVCFRIKEKFGLPTF 281 (337)
Q Consensus 252 EGAD~lMVKPa~~yLDii~~~k~~~~~P~~ 281 (337)
=|||++.+ |+.+-.+.+..+.+....|..
T Consensus 182 AGAd~i~~-~~~~t~e~~~~~~~~~~~~~~ 210 (261)
T 2p10_A 182 AGADILVC-HXGLTTGGAIGARSGKSXDDC 210 (261)
T ss_dssp HTCSEEEE-ECSCC---------CCCHHHH
T ss_pred CCCCEEEE-CCCCCCCCCCCCCCCCCHHHH
T ss_conf 19988996-488666777466877898999
No 241
>>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} (A:1-394)
Probab=25.04 E-value=47 Score=14.38 Aligned_cols=111 Identities=18% Similarity=0.054 Sum_probs=69.3
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC-----CCCCCHHHHHHHHHHHHH-C-CCEEEECCCCCHH
Q ss_conf 32889999999999998889367633025633455445421-----576537999999999730-1-4479861332710
Q gi|255764463|r 63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHI-----IDPDNLINEGICAIKKNI-P-NIGIITDVALDPF 135 (337)
Q Consensus 63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA-----~n~dglv~rAIr~IK~~f-p-dl~vi~DVcLc~Y 135 (337)
..-....+.+.+..+.++|+++|-|-|..+... ..|-.. .|+.-=-..-.+.+-++. . .|.||.||.+-..
T Consensus 45 ~~G~~~gi~~~l~yl~~lGv~~i~l~Pi~~~~~--~~gy~~~~~~~v~~~~Gt~~~lk~lv~~~H~~gi~VilDvV~nH~ 122 (394)
T 2z1k_A 45 KGGTLWGVAEKLPYLLDLGVEAIYLNPVFASTA--NHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVFNHT 122 (394)
T ss_dssp CCCCHHHHHHTHHHHHHHTCCEEEECCCEEESS--TTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC
T ss_conf 884899999856999877997899698987999--999885777876844388599999999997557099986033454
Q ss_pred HCCCCCC-------------------------------------CCC--CCCCCHHHHHHHHHHHHHHHHHCCCCEEEC
Q ss_conf 0114310-------------------------------------013--654462899999999999999628973524
Q gi|255764463|r 136 TIHGHDG-------------------------------------ILC--DGEIVNDETIELISHAAVIQADAGADIIAP 175 (337)
Q Consensus 136 T~hGHcG-------------------------------------i~~--~g~IdND~Tl~~L~k~Al~~A~AGaDivAP 175 (337)
...+..+ ... +-...|...-..+........+.|+|..-.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~g~dg~r~ 201 (394)
T 2z1k_A 123 GRGFFAFQHLXENGEQSPYRDWYHVKGFPLKAYTAHPNYEAWWGNPELPKLKVETPAVREYLLAVAEHWIRFGVDGWRL 201 (394)
T ss_dssp CTTSHHHHHHHHHGGGCTTGGGBCBCSSSCCTTSSSCSBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 4333211001112468864444443447875456766544444456566143311667777664544523348836996
No 242
>>2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, structural genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae} (A:1-142)
Probab=25.00 E-value=44 Score=14.55 Aligned_cols=60 Identities=13% Similarity=0.113 Sum_probs=35.6
Q ss_pred CCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHH
Q ss_conf 57653799999999973014479861332710011431001365446289999999999999962897352466767799
Q gi|255764463|r 104 IDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRV 183 (337)
Q Consensus 104 ~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV 183 (337)
-|++-+..+|.+.|++. ||-+|+-+.++.. ......+..+.....+..++.+..||..+.
T Consensus 13 Gdp~liTl~A~~~l~~a--------Dvi~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (142)
T 2npn_A 13 GSPEFLTLQAISGLRHA--------QAIVALDKGEQKS------------DLLALRQKIVDTHAPGTPIYAVTDPERDRN 72 (142)
T ss_dssp SCGGGCCHHHHHHHHHC--------SEEEEEC---CCH------------HHHHHHHHHHHHHSTTCCEEEECC------
T ss_pred CCHHHHHHHHHHHHHCC--------CEEEEECCCCCHH------------HHHHHHHHHHHHCCCCCEEEEECCCHHCCC
T ss_conf 99899999999999769--------9999968877415------------478868999974477875884046001022
No 243
>>3g1v_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, D70G; HET: 5FU; 1.30A {Methanothermobacter thermautotrophicusstr} PDB: 3g1s_A* 3g1x_A* 1kly_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3g1a_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 1loq_A* 1lor_A* 1km0_A* 1dv7_A 2zz3_A* 1km1_A* 1km6_A* 1km5_A* ... (A:)
Probab=24.95 E-value=47 Score=14.37 Aligned_cols=93 Identities=14% Similarity=0.046 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCC-----CCCC----CHHHHHHHHHHHHHHHHHCCCCEEECCCCC-
Q ss_conf 999999999730144798613327100114310013-----6544----628999999999999996289735246676-
Q gi|255764463|r 110 INEGICAIKKNIPNIGIITDVALDPFTIHGHDGILC-----DGEI----VNDETIELISHAAVIQADAGADIIAPSEMM- 179 (337)
Q Consensus 110 v~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~-----~g~I----dND~Tl~~L~k~Al~~A~AGaDivAPSdMM- 179 (337)
..++++.+++.-+++. +-++-+..++..|..++-. +..+ +..-........+-..+++|||.|.-.+-+
T Consensus 24 ~~~~l~~i~~~~~~v~-~~~~g~~~~~~~g~~~i~~l~~~~~~~i~~d~k~~di~~~~~~~~~~~~~~gad~v~v~~~~~ 102 (228)
T 3g1v_A 24 RDDALRVTGEVREYID-TVKIGYPLVLSEGMDIIAEFRKRFGCRIIAGFKVADIPETNEKICRATFKAGADAIIVHGFPG 102 (228)
T ss_dssp HHHHHHHHHHHTTTCS-EEEECHHHHHHHCTHHHHHHHHHHCCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTC
T ss_pred HHHHHHHHHHHCCCCC-EEEECHHHHHHCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 9999999998488662-999879999744999999999768980998502321877999999999854998999861389
Q ss_pred CCHHHHHHHHHHHCCCCCCCEECH
Q ss_conf 779999999998778857730033
Q gi|255764463|r 180 DGRVQEIRKKLDSHGHINVGIMPY 203 (337)
Q Consensus 180 DGrV~aIR~~Ld~~g~~~~~ImsY 203 (337)
...+..+++..+.....-..+...
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~~ 126 (228)
T 3g1v_A 103 ADSVRACLNVAEEMGREVFLLTEM 126 (228)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSC
T ss_pred HHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 789999999988518840341011
No 244
>>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901} (A:)
Probab=24.90 E-value=28 Score=15.87 Aligned_cols=71 Identities=17% Similarity=0.178 Sum_probs=50.6
Q ss_pred CCCCCCCC-HHHHHHHHHHHHHHCCCCEEEEC----CCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 44315721-14788988887664089879955----311458999999962499899993461899999999888978
Q gi|255764463|r 230 KTYYLDPA-NVQEAIREASIDIQESADMLLVK----PGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 230 ~sYQmd~~-n~~eA~~e~~~D~~EGAD~lMVK----Pa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
..|+...+ |..+|+..... ..--|++++- |+|.-+++++.+++...+|+..+-..++......+.+.|..+
T Consensus 28 ~g~~v~~a~~~~~al~~l~~--~~~~dlvilD~~l~~~~dg~el~~~i~~~~~~pii~lt~~~~~~~~~~~~~~G~~~ 103 (140)
T 3h5i_A 28 YGYTVEIALTGEAAVEKVSG--GWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAHTEPAVVEKIRSVTAYG 103 (140)
T ss_dssp TTCEEEEESSHHHHHHHHHT--TCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESSSSCCCCGGGGGSCEEE
T ss_pred CCEEEEEECCCHHHHHHHHC--CCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCE
T ss_conf 88699997263788998750--45654999713432113799999999856999899998999999999999779998
No 245
>>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3} (A:)
Probab=24.89 E-value=47 Score=14.36 Aligned_cols=70 Identities=17% Similarity=0.174 Sum_probs=50.7
Q ss_pred CCCCC-CCHHHHHHHHHHHHHHCCCCEEEEC---CCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 43157-2114788988887664089879955---3114589999999624-99899993461899999999888978
Q gi|255764463|r 231 TYYLD-PANVQEAIREASIDIQESADMLLVK---PGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 231 sYQmd-~~n~~eA~~e~~~D~~EGAD~lMVK---Pa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
.++.. ..|..||+..... ++--|++.+- |++.-+++++.+++.. ..|+...--+++-..+..|-+.|..+
T Consensus 29 ~~~v~~a~~~~eal~~l~~--~~~~dlillD~~lP~~~G~~~~~~ir~~~~~~~iivlt~~~~~~~~~~a~~~Ga~~ 103 (154)
T 2qsj_A 29 GMRVEGAETVSDALAFLEA--DNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVALISGETDHELIRAALEAGADG 103 (154)
T ss_dssp TEEEEEESSHHHHHHHHHT--TCCCSEEEECC------CHHHHHHHHHHCTTSEEEEC-----CHHHHHHHHTTCCB
T ss_pred CEEEEEECCHHHHHHHHHH--CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCE
T ss_conf 8299997899999999974--69996999937889998689999999868999399998458799999999869978
No 246
>>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A (A:105-274)
Probab=24.87 E-value=47 Score=14.36 Aligned_cols=54 Identities=15% Similarity=0.029 Sum_probs=41.5
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCC
Q ss_conf 8899999999999988893676330256334554454215765379999999997301-447986133
Q gi|255764463|r 65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVA 131 (337)
Q Consensus 65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVc 131 (337)
-+.+.+.+.++++.+.|.++|-|-.+-++-. ..-..|+++++.++ ++.++.|..
T Consensus 11 ~~~~~~~~~a~~~~~~G~~~ikik~G~~~~~-------------~~~~~i~~~r~~~g~~~~l~~d~n 65 (170)
T 2ozt_A 11 GSGQAALEQWQQSWQRGQTTFKWKVGVXSPE-------------EEQAILKALLAALPPGAKLRLDAN 65 (170)
T ss_dssp CTGGGHHHHHHHHHHTTCCEEEEECSSSCHH-------------HHHHHHHHHHHHSCTTCEEEEECT
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEECCCCHH-------------HHHHHHHHHHHHCCCCCEECCCCC
T ss_conf 4322389999999873578688850333518-------------899999998874587514524544
No 247
>>1xrs_A D-lysine 5,6-aminomutase alpha subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'- deoxyadenosine, radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} (A:)
Probab=24.82 E-value=48 Score=14.35 Aligned_cols=107 Identities=25% Similarity=0.282 Sum_probs=57.7
Q ss_pred CCCCCC-CHHHHHHHHHHHHHC--C-CEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECC-
Q ss_conf 215765-379999999997301--4-47986133271001143100136544628999999999999996289735246-
Q gi|255764463|r 102 HIIDPD-NLINEGICAIKKNIP--N-IGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPS- 176 (337)
Q Consensus 102 eA~n~d-glv~rAIr~IK~~fp--d-l~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPS- 176 (337)
+.|.+. ...-.++..||+..| + +.=--|.--.||-. -|+..|.|.-| ..||..-|.+|||+||-=
T Consensus 115 ~~~~~~~~~~~~~~~~l~~~~~~r~~~~~~~~~~p~p~iy----~iVAtG~i~eD------v~qa~aAA~~GAD~IaVIR 184 (516)
T 1xrs_A 115 EVKTKALSMAKETVEKIKNNRSIRESRFEEYGDKSGPLLY----VIVATGNIYED------ITQAVAAAKQGADVIAVIR 184 (516)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSCEEE----EEECCSCHHHH------HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE----EEEECCCHHHH------HHHHHHHHHCCCCEEEEHH
T ss_conf 9999999999999999999999999999961999987599----99833854878------9999999874897898635
Q ss_pred ----CCCC----C--------------HHHHHHHHHHHCCCC-CCCEECHHHHHHHHHHCCHHHHHH
Q ss_conf ----6767----7--------------999999999877885-773003366643543010167531
Q gi|255764463|r 177 ----EMMD----G--------------RVQEIRKKLDSHGHI-NVGIMPYVAKFNSSFYGPYRDAIS 220 (337)
Q Consensus 177 ----dMMD----G--------------rV~aIR~~Ld~~g~~-~~~ImsYsaKfaS~fYgPFRdA~~ 220 (337)
.-.| | ++.+.|++||..+-+ .-.|-= .-|+|.+-+|==-+.+
T Consensus 185 ttgQSllDyvp~GaT~eG~GGt~aTqenfR~mRkALD~v~~evGRyI~~--~nY~SGlcmPEIA~m~ 249 (516)
T 1xrs_A 185 TTGQSLLDYVPYGATTEGFGGTYATQENFRLMREALDKVGAEVGKYIRL--CNYCSGLCMPEIAAMG 249 (516)
T ss_dssp CTTGGGCSSCCCSCCSCCTTSCCCCHHHHHHHHHHHHHHHHHHTSCCEE--EEECCSTTHHHHHHHH
T ss_pred HCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEE--ECCCCCCCCHHHHHHH
T ss_conf 1235553247678987775773004899999999988999984872342--0212113439999999
No 248
>>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} (A:)
Probab=24.78 E-value=48 Score=14.35 Aligned_cols=37 Identities=14% Similarity=-0.046 Sum_probs=24.2
Q ss_pred HHHHHHCCCCEEEEC-------CCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 887664089879955-------3114589999999624998999
Q gi|255764463|r 246 ASIDIQESADMLLVK-------PGLPYLDVCFRIKEKFGLPTFA 282 (337)
Q Consensus 246 ~~~D~~EGAD~lMVK-------Pa~~yLDii~~~k~~~~~P~~a 282 (337)
+..-++.|+|++.|- .+.+.++.|+++++..++|+.+
T Consensus 149 a~~~~~~g~d~i~v~g~~~gg~~~~~~~~~i~~i~~~~~ipii~ 192 (265)
T 1wv2_A 149 ARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLV 192 (265)
T ss_dssp HHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEE
T ss_pred HHHHHHCCCCEEEECCCHHHHCCCCCCHHHHHHHHHCCCCEEEE
T ss_conf 99998669848753435655445747878999887327832897
No 249
>>1ehw_A NDPK H4, nucleoside diphosphate kinase; NM23, mitochondrial, killer- OF-prune, transferase; 2.40A {Homo sapiens} (A:)
Probab=24.45 E-value=30 Score=15.69 Aligned_cols=46 Identities=11% Similarity=0.254 Sum_probs=36.0
Q ss_pred EEECCCCCCCHHHHHHHHHHHCCCCC--CCEECHHHHHHHHHHCCHHH
Q ss_conf 35246676779999999998778857--73003366643543010167
Q gi|255764463|r 172 IIAPSEMMDGRVQEIRKKLDSHGHIN--VGIMPYVAKFNSSFYGPYRD 217 (337)
Q Consensus 172 ivAPSdMMDGrV~aIR~~Ld~~g~~~--~~ImsYsaKfaS~fYgPFRd 217 (337)
+|=|..+-.|+++.|-+.|..+||.= ...+..+-.-+..||...++
T Consensus 30 iIKPdav~~~~~g~Il~~i~~~Gf~I~~~k~~~lt~~~a~~~y~~~~g 77 (162)
T 1ehw_A 30 AVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRR 77 (162)
T ss_dssp EECHHHHHTTCHHHHHHHHHHTTCEEEEEEEECCCHHHHHHHTGGGTT
T ss_pred EECCHHHCCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCC
T ss_conf 989246404779999999998699799877425899999999999748
No 250
>>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica} (A:139-367)
Probab=24.42 E-value=48 Score=14.30 Aligned_cols=51 Identities=10% Similarity=0.126 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECC
Q ss_conf 899999999999988893676330256334554454215765379999999997301-44798613
Q gi|255764463|r 66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDV 130 (337)
Q Consensus 66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DV 130 (337)
+.+.+.+++++..+.|.++|-+=.+.+.. +| -+-|++|++.++ ++.++.|.
T Consensus 17 ~~e~~~~~~~~~~~~G~~~~KiKvg~~~~-~d-------------~~~i~~ir~~~g~~~~l~~Da 68 (229)
T 3ddm_A 17 NPENPEDVVARKAAEGYRAFKLKVGFDDA-RD-------------VRNALHVRELLGAATPLMADA 68 (229)
T ss_dssp CSSSHHHHHHHHHHHTCCCEEEECSSCHH-HH-------------HHHHHHHHHHHCSSSCEEEEC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCH-HH-------------HHHHHHHHHHCCCCCEEEEEC
T ss_conf 86779999999997298789743799969-99-------------999999998638897499876
No 251
>>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, structural genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima MSB8} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A (A:121-345)
Probab=24.22 E-value=49 Score=14.28 Aligned_cols=56 Identities=20% Similarity=0.195 Sum_probs=37.9
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 8632889999999999998889367633025633455445421576537999999999730144798613
Q gi|255764463|r 61 DVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDV 130 (337)
Q Consensus 61 Gv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DV 130 (337)
-...-+.+.+++++++..+.|.++|-|=++.+.. .|. ..++++++..|++.++.|.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~G~~~~Klk~G~~~~-~d~-------------~~~~~~r~~~~~~~l~vDa 69 (225)
T 2zad_A 14 TVGIDTVENRVKEAKKIFEEGFRVIKIKVGENLK-EDI-------------EAVEEIAKVTRGAKYIVDA 69 (225)
T ss_dssp EECSCCHHHHHHHHHHHHHTTCSEEEEECCSCHH-HHH-------------HHHHHHHHHSTTCEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCH-HHH-------------HHHHHHHHHHCHHHHHHHH
T ss_conf 1466502577888888887520221223344406-789-------------9999887530113332001
No 252
>>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} (A:1-169)
Probab=24.18 E-value=40 Score=14.88 Aligned_cols=39 Identities=26% Similarity=0.325 Sum_probs=27.7
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 328899999999999988893676330256334554454
Q gi|255764463|r 63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGS 101 (337)
Q Consensus 63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~Gs 101 (337)
+||+--.+.+.++++.+.|+..+++||--|.-.....|+
T Consensus 104 mry~~P~i~d~l~~l~~~g~~~ii~lpLyPqyS~~tt~s 142 (169)
T 1lbq_A 104 FRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGS 142 (169)
T ss_dssp ESSSSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHH
T ss_pred EECCCCCHHHHHHHHHHCCCCEEEEEECCHHHCCCHHHH
T ss_conf 337997377899999865985489986760322052237
No 253
>>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics, MCSG, PSI-2, protein structure initiative, midwest center for structural genomics; 2.60A {Shigella flexneri} (A:)
Probab=24.17 E-value=49 Score=14.27 Aligned_cols=71 Identities=20% Similarity=0.137 Sum_probs=53.6
Q ss_pred HHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 88876640898799553114589999999624998999934618999999998889788999999999997726999982
Q gi|255764463|r 245 EASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFT 324 (337)
Q Consensus 245 e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~Iit 324 (337)
........|++.+.+.--+..-.++..+++ .++++.+|-| |.. +.+.-+.+-|+|.|+|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~g~~v~~wtv----------------~~~----~~~~~~~~~gvd~I~T 234 (247)
T 2otd_A 176 WRELTARLGCVSIHLNHKLLDKARVXQLKD-AGLRILVYTV----------------NKP----QHAAELLRWGVDCICT 234 (247)
T ss_dssp HHHHHHHHTCSEEEEEGGGCCHHHHHHHHH-TTCEEEEECC----------------CCH----HHHHHHHHHTCSEEEE
T ss_pred CHHHHHCCCEEEEEEECCCCCHHHHHHHHH-CCCEEEEECC----------------CCH----HHHHHHHHCCCCEEEE
T ss_conf 000121047038874023489999999998-7999999846----------------989----9999999779899998
Q ss_pred CHHHHHHHHHHC
Q ss_conf 018999999850
Q gi|255764463|r 325 YFAMEAARILTH 336 (337)
Q Consensus 325 Y~A~~~a~~L~~ 336 (337)
=+...+.++|++
T Consensus 235 D~p~~~~~~~~~ 246 (247)
T 2otd_A 235 DAIDVIGPNFTA 246 (247)
T ss_dssp SCTTTSCTTCCC
T ss_pred CCHHHCCHHHCC
T ss_conf 985763722116
No 254
>>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 1doz_A 2q2n_A* 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A (A:1-148,A:291-310)
Probab=23.68 E-value=47 Score=14.41 Aligned_cols=37 Identities=8% Similarity=-0.015 Sum_probs=26.0
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
Q ss_conf 3288999999999999888936763302563345544
Q gi|255764463|r 63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNT 99 (337)
Q Consensus 63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~ 99 (337)
+||+--.+.+.++++.+.|+..+++||--|.......
T Consensus 86 mry~~P~i~~~i~~l~~~g~~~ii~lPLyPqyS~sTt 122 (168)
T 2h1v_A 86 LAHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSV 122 (168)
T ss_dssp ESSSSSBHHHHHHHHHHTTCCEEEEEESSSSCCTTTH
T ss_pred CCCCCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCC
T ss_conf 1336674888999999648864388875664155742
No 255
>>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, quinolinic acid; 2.40A {Mycobacterium tuberculosis H37RV} (A:130-274)
Probab=23.64 E-value=50 Score=14.20 Aligned_cols=62 Identities=10% Similarity=0.147 Sum_probs=37.0
Q ss_pred HHHHHHHHHCCCCEEEECCCHHH-HHHHH-HH-HHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 98888766408987995531145-89999-99-96249989999346189999999988897889999999999977269
Q gi|255764463|r 243 IREASIDIQESADMLLVKPGLPY-LDVCF-RI-KEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGC 319 (337)
Q Consensus 243 ~~e~~~D~~EGAD~lMVKPa~~y-LDii~-~~-k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGA 319 (337)
.-|+.....+|+|++++=|.-|. ..-.. .+ ....++|+.|- |-++. |.+.-+..+||
T Consensus 75 ~~e~~~a~~~g~D~v~l~~v~p~~~~~~~~~~~~~~~~~pi~a~---------------GGI~~-----~ni~~~~~aGa 134 (145)
T 1qpo_A 75 LEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESS---------------GGLSL-----QTAATYAETGV 134 (145)
T ss_dssp HHHHHHHGGGCCSEEEEETCCHHHHHHHHHHHHHHCTTCEEEEE---------------SSCCT-----TTHHHHHHTTC
T ss_pred HHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEE---------------CCCCH-----HHHHHHHHCCC
T ss_conf 98888877402228985688879999999997277994799998---------------89999-----99999986599
Q ss_pred CEEEE
Q ss_conf 99982
Q gi|255764463|r 320 DGIFT 324 (337)
Q Consensus 320 d~Iit 324 (337)
|.|..
T Consensus 135 ~~ivv 139 (145)
T 1qpo_A 135 DYLAV 139 (145)
T ss_dssp SEEEC
T ss_pred CEEEC
T ss_conf 99984
No 256
>>1j36_A ANCE, angiotensin converting enzyme; hydrolase; HET: LPR; 2.40A {Drosophila melanogaster} (A:258-426,A:484-592)
Probab=23.51 E-value=23 Score=16.48 Aligned_cols=209 Identities=17% Similarity=0.109 Sum_probs=99.0
Q ss_pred CCCHHHHHHHHHHHH-HCCCCEE-------EEEECCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCEEE--ECCCC
Q ss_conf 288999999999999-8889367-------633025633455-445421576537999999999730144798--61332
Q gi|255764463|r 64 RMSIDVAVEKIKQVA-DLGIPAI-------AIFPNIPMDLRN-NTGSHIIDPDNLINEGICAIKKNIPNIGII--TDVAL 132 (337)
Q Consensus 64 R~Sid~L~~eie~~~-~lGI~av-------~LFp~I~~~~Kd-~~GseA~n~dglv~rAIr~IK~~fpdl~vi--~DVcL 132 (337)
.|+...+.+.+++-. .+|++.. -+| .=|.+-++ ..-..|||-.+ -+|.-|. +.|-.
T Consensus 23 ~yt~~~mf~~ae~FF~SLGl~~lp~~FW~~S~~-~kP~dgr~v~ChaSAwDf~~------------~~D~RIkmCt~v~~ 89 (278)
T 1j36_A 23 AYTPLKMFQMGDDFFTSMNLTKLPQDFWDKSII-EKPTDGRDLVCHASAWDFYL------------IDDVRIKQCTRVTQ 89 (278)
T ss_dssp TCCHHHHHHHHHHHHHTTTCCCCCHHHHHHCBC-SCCSSSCCCCCSCEEEECSS------------SSCEEEECCCCSSH
T ss_pred CCCHHHHHHHHHHHHHHHCCHHCCHHHHHHHHH-HCCCCCCCCCCCCCEECCCC------------CCCCCEECCCCCCH
T ss_conf 323999989999999983641030678744554-04666899986752005667------------87775122687868
Q ss_pred C-HHHCC---CCCCCCC---CC-----CCCHHHHHHHHHHHHHHHH-------HCCC-CEEECCCCCCCHHHHHHHHHHH
Q ss_conf 7-10011---4310013---65-----4462899999999999999-------6289-7352466767799999999987
Q gi|255764463|r 133 D-PFTIH---GHDGILC---DG-----EIVNDETIELISHAAVIQA-------DAGA-DIIAPSEMMDGRVQEIRKKLDS 192 (337)
Q Consensus 133 c-~YT~h---GHcGi~~---~g-----~IdND~Tl~~L~k~Al~~A-------~AGa-DivAPSdMMDGrV~aIR~~Ld~ 192 (337)
. =+|-| ||.-... +. .--|+...|+.++.-..-+ +-|- +-.. .|------.-.|.+|++
T Consensus 90 edf~tiHHEmGHi~Y~l~Y~~qP~lfR~gANpgFhEAIGd~iaLSv~tP~hL~~iGLl~~~~-~d~~~~IN~L~~~AL~K 168 (278)
T 1j36_A 90 DQLFTVHHELGHIQYFLQYQHQPFVYRTGANPGFHEAVGDVLSLSVSTPKHLEKIGLLKDYV-RDDEARINQLFLTALDK 168 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCGGGCSCSHHHHHHHHHHHHHHHHHSHHHHHHTTSSSSCC-CCSTTTHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHH
T ss_conf 89999999999999999981598221168994087679999999963999996621100236-87466899999999989
Q ss_pred CCC-CCCCEECHHHHHHHH-----HHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHH
Q ss_conf 788-577300336664354-----30101675310244677774431572114788988887664089879955311458
Q gi|255764463|r 193 HGH-INVGIMPYVAKFNSS-----FYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYL 266 (337)
Q Consensus 193 ~g~-~~~~ImsYsaKfaS~-----fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yL 266 (337)
-.+ .|++ |--+|-|. ||--+=.++|-...-.-..--++-|.-++++|=.....
T Consensus 169 Ih~~~~~p---y~ryfls~ilqFQ~~~~lC~~ag~~~~~~~~~pLh~Cd~y~s~~aG~~l~~------------------ 227 (278)
T 1j36_A 169 IHISADVE---YLRYLVSFIIQFQFYKSACIKAGQYDPDNVELPLDNCDIYGSARAGAAFHN------------------ 227 (278)
T ss_dssp THHHHTCC---CHHHHHHHHHHHHHHHHHHHHTTSCCSSCTTSCGGGCCCTTCHHHHHHHHH------------------
T ss_pred HEECCCCC---HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCHHHHHHHHH------------------
T ss_conf 81189976---699999999999999999998224563223576400355477999999999------------------
Q ss_pred HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHC
Q ss_conf 9999999624998999934618999999998889788999999999997726999982018999999850
Q gi|255764463|r 267 DVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAARILTH 336 (337)
Q Consensus 267 Dii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~~L~~ 336 (337)
|++..+..-| .-++|.+++-++--|+.++.||+| +-+||.+
T Consensus 228 ------------------------ml~~G~S~~W----~~~le~~tG~~~~~~~~lleYF~P-L~~wL~~ 268 (278)
T 1j36_A 228 ------------------------MLSMGASKPW----PDALEAFNGERIMSGKAIAEYFEP-LRVWLEA 268 (278)
T ss_dssp ------------------------HHTTTTSSCH----HHHHHHHHSCCCCCCTTHHHHSHH-HHHHHHH
T ss_pred ------------------------HHCCCCCCCH----HHHHHHHCCCCCCCHHHHHHHHHH-HHHHHHH
T ss_conf ------------------------9808699999----999999809988985899999999-9999999
No 257
>>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri} (A:)
Probab=23.49 E-value=50 Score=14.19 Aligned_cols=179 Identities=13% Similarity=0.069 Sum_probs=91.4
Q ss_pred CHHHHHHHHHHHHHC-CCEEEECCCCCHHHCC----------CCCCCCCC----C---CCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 379999999997301-4479861332710011----------43100136----5---4462899999999999999628
Q gi|255764463|r 108 NLINEGICAIKKNIP-NIGIITDVALDPFTIH----------GHDGILCD----G---EIVNDETIELISHAAVIQADAG 169 (337)
Q Consensus 108 glv~rAIr~IK~~fp-dl~vi~DVcLc~YT~h----------GHcGi~~~----g---~IdND~Tl~~L~k~Al~~A~AG 169 (337)
..+..+++.++++.+ +..|+.. +-.|||.- |+..++.+ - .-..+.-.+.+.+.+..+.+||
T Consensus 122 ~~~~~~~~~~~~~~~~~~~v~~~-~~gP~t~a~~l~~~~~~~g~~~~~~~~~~~pe~v~~ll~~~~~~~~~~~~~~~eag 200 (354)
T 3cyv_A 122 GYVMNAVRTIRHELKGEVPLIGF-SGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAG 200 (354)
T ss_dssp HHHHHHHHHHHHHTTTSSCEEEE-EECHHHHHHHHHHSSCCSSCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCCCEEEE-ECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 78898999999860688870345-15448899999824401678999988876467899999888899999999998604
Q ss_pred CCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHC-CCCCCC--CCCCCCCCCCHHHHHHHHH
Q ss_conf 9735246676779999999998778857730033666435430101675310-244677--7744315721147889888
Q gi|255764463|r 170 ADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAIST-RDLLKG--DKKTYYLDPANVQEAIREA 246 (337)
Q Consensus 170 aDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S-~p~~~g--dr~sYQmd~~n~~eA~~e~ 246 (337)
+|+|.-.|=. .+.| |-+..--|+.|+-..+-. -... | +...+.+...|...-+
T Consensus 201 ~d~I~~~d~~------------------~~~l--sp~~~~ef~~p~~k~i~~~i~~~-g~~~~~~~~h~~g~~~~~l--- 256 (354)
T 3cyv_A 201 AQAVMIFDTW------------------GGVL--TGRDYQQFSLYYMHKIVDGLLRE-NDGRRVPVTLFTKGGGQWL--- 256 (354)
T ss_dssp CSEEEEECTT------------------GGGS--CHHHHHHHTHHHHHHHHHHSCSE-ETTEECCEEEECTTTTTTH---
T ss_pred CCHHEECHHH------------------HHHC--CHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCEEEECCCCCHHH---
T ss_conf 4301112156------------------6542--27775435655479999999863-1466774573058852120---
Q ss_pred HHHH-HCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC--CEEE
Q ss_conf 8766-408987995531145899999996249989999346189999999988897889999999999977269--9998
Q gi|255764463|r 247 SIDI-QESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGC--DGIF 323 (337)
Q Consensus 247 ~~D~-~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGA--d~Ii 323 (337)
-++ +-|+|.+-+-+.+..-++......+.-+--....+ .-.-..+++.-|....+.+.|. .+|+
T Consensus 257 -~~~~~~g~d~~~~~~~~d~~~~~~~~g~~~~l~G~~~~~------------~l~~t~eev~~~v~~~~~~~~~~~g~Il 323 (354)
T 3cyv_A 257 -EAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPS------------MLYAPPARIEEEVATILAGFGHGEGHVF 323 (354)
T ss_dssp -HHHHTTSCSEEECCTTSCHHHHHHHHTTTSEEECCBCGG------------GGGSCHHHHHHHHHHHHTTTTTSSCEEB
T ss_pred -HHHHHCCCCEECCCCCCCHHHHHHHCCCCEEEEECCCHH------------HHCCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf -466751886112432100999998718986899389868------------8769999999999999998578999699
Q ss_pred E
Q ss_conf 2
Q gi|255764463|r 324 T 324 (337)
Q Consensus 324 t 324 (337)
+
T Consensus 324 ~ 324 (354)
T 3cyv_A 324 N 324 (354)
T ss_dssp C
T ss_pred E
T ss_conf 7
No 258
>>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} (A:)
Probab=23.39 E-value=51 Score=14.17 Aligned_cols=71 Identities=18% Similarity=0.200 Sum_probs=52.9
Q ss_pred CCCCCCCCCHH-HHHHHHHHHHHHCCCCEEEEC---CCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 74431572114-788988887664089879955---3114589999999624-99899993461899999999888978
Q gi|255764463|r 229 KKTYYLDPANV-QEAIREASIDIQESADMLLVK---PGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 229 r~sYQmd~~n~-~eA~~e~~~D~~EGAD~lMVK---Pa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
+..|+...++. .||+.- -..+--|++.+- |+|-=+++++.+|+.. ..|+...-.++.......|.+.|..|
T Consensus 25 ~~g~~v~~a~~~~eal~~---~~~~~~dliilD~~lP~~dG~~~~~~lr~~~~~~piI~lt~~~~~~~~~~a~~~Ga~d 100 (155)
T 1qkk_A 25 LAGFTVSSFASATEALAG---LSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYD 100 (155)
T ss_dssp HTTCEEEEESCHHHHHHT---CCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGGHHHHHHHHHTTCCE
T ss_pred HCCCEEEEECCHHHHHHH---HHCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCE
T ss_conf 879989997899999998---5447998897125789998999999999848789489898999999999999879988
No 259
>>1oao_C CODH, carbon monoxide dehydrogenase alpha subunit; electron transfer, oxidoreductase, acetyl-COA formation, WOOD/ljungdahl pathway; 1.90A {Moorella thermoacetica} (C:1-324)
Probab=23.37 E-value=51 Score=14.17 Aligned_cols=133 Identities=11% Similarity=-0.075 Sum_probs=90.8
Q ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHHHCC-CCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEE
Q ss_conf 98811048887863288999999999999888-93676330256334554454215765379999999997301-44798
Q gi|255764463|r 50 EKTVESINSMPDVMRMSIDVAVEKIKQVADLG-IPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGII 127 (337)
Q Consensus 50 ~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lG-I~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi 127 (337)
...+++++-+.-..-++.|.+++.+-..+..| |+.|+++.+=++. +. -.....|+-.+ |++|.
T Consensus 120 ~~~~~~~~~~~~~~Gf~~d~ilr~lg~~iv~G~I~Gv~~ivGC~~~------------~~---~~~~iakel~~~d~lVl 184 (324)
T 1oao_C 120 KYKPDEPLLPPPWTGFIGDPVVRRFGIKMVDWTIPGEAIILGRAKD------------SK---ALAKIVKELMGMGFMLF 184 (324)
T ss_dssp GCBTTBCSSCTTCCSSCCHHHHHHTHHHHTTTSSCCEEEEEECCSC------------HH---HHHHHHHHHHHTTCEEE
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCC------------HH---HHHHHHHHHHHCCCEEE
T ss_conf 1797677777873066660889974975105877715899606998------------48---99999999986683787
Q ss_pred -ECCCCCHHHCCCCCCC-----CC-CCCCCHHHHHHHHHHHHHHHH----------------HCCCCEEECCCCCCCHHH
Q ss_conf -6133271001143100-----13-654462899999999999999----------------628973524667677999
Q gi|255764463|r 128 -TDVALDPFTIHGHDGI-----LC-DGEIVNDETIELISHAAVIQA----------------DAGADIIAPSEMMDGRVQ 184 (337)
Q Consensus 128 -~DVcLc~YT~hGHcGi-----~~-~g~IdND~Tl~~L~k~Al~~A----------------~AGaDivAPSdMMDGrV~ 184 (337)
+--.--.|.+.|.+=. ++ ...+||-.-+....+.|..+. +-++=.+||+.|=+--|
T Consensus 185 ~~GC~~~~~~~~g~~t~~ip~vl~~GsC~d~~~~~~~a~~lA~~fG~~~~g~~~~~~d~~~n~lp~~~~A~~~~~qKAv- 263 (324)
T 1oao_C 185 ICDEAVEQLLEENVKLGIDYIAYPLGNFTQIVHAANYALRAGMMFGGVTPGAREEQRDYQRRRIRAFVLYLGEHDMVKT- 263 (324)
T ss_dssp EETHHHHHHHHTTCCCBGGGTEEEEESGGGGHHHHHHHHHHHHTTTCCCTTCHHHHHHHHHHHCCEEEEEESSCCHHHH-
T ss_pred ECCCHHHHHHHHCCCCCCCEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH-
T ss_conf 6010899998707102770589734760245311368998888747989664689999998765778642578447898-
Q ss_pred HHHHHHHHCCCCCC
Q ss_conf 99999987788577
Q gi|255764463|r 185 EIRKKLDSHGHINV 198 (337)
Q Consensus 185 aIR~~Ld~~g~~~~ 198 (337)
+|--.+-.-|+..+
T Consensus 264 Ai~~~~~~lGip~i 277 (324)
T 1oao_C 264 AAAFGAIFTGFPVI 277 (324)
T ss_dssp HHHHHHHHHTCCEE
T ss_pred HHHCCHHHCCCCEE
T ss_conf 76506876098774
No 260
>>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural genomics consortium, SGC, alternative initiation ATP-binding; 2.80A {Homo sapiens} (A:)
Probab=23.25 E-value=51 Score=14.15 Aligned_cols=99 Identities=12% Similarity=0.026 Sum_probs=57.1
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCC
Q ss_conf 63288999999999999888936763302563345544542157653799999999973014479861332710011431
Q gi|255764463|r 62 VMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHD 141 (337)
Q Consensus 62 v~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHc 141 (337)
||--+...+....+.+.+.|+++..+.+..+++.+. +++...|+.--.++|-|||+-=...-.+=+
T Consensus 39 IF~~t~~~~~~l~~~L~~~g~~~~~lhg~~~q~~R~--------------~~~~~F~~g~~~iLv~TDv~aRGiDi~~v~ 104 (175)
T 2rb4_A 39 IFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRA--------------SIIQRFRDGKEKVLITTNVCARGIDVKQVT 104 (175)
T ss_dssp EECSCHHHHHHHHHHHHTTTCCEEEECSSCCHHHHH--------------HHHHHHHTTSCSEEEECCSCCTTTCCTTEE
T ss_pred EECCHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHH--------------HHHHHHHCCCEEEEECHHHHHHHHHCCCEE
T ss_conf 870518999999999985388731113430567788--------------888886169702563013554420104400
Q ss_pred CCCCCCCCCH---HHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 0013654462---89999999999999962897352
Q gi|255764463|r 142 GILCDGEIVN---DETIELISHAAVIQADAGADIIA 174 (337)
Q Consensus 142 Gi~~~g~IdN---D~Tl~~L~k~Al~~A~AGaDivA 174 (337)
-+++=+-..| ....+.+..-+=--+++|---.|
T Consensus 105 ~VInyd~P~~~~~~~~~~~YiHR~GRtgR~g~~G~a 140 (175)
T 2rb4_A 105 IVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLA 140 (175)
T ss_dssp EEEESSCCC--CCSCCHHHHHHHHCBC----CCEEE
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEE
T ss_conf 256535898645556999999999763768994489
No 261
>>1o4u_A Type II quinolic acid phosphoribosyltransferase; TM1645, structural genomics, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} (A:160-272)
Probab=23.15 E-value=51 Score=14.14 Aligned_cols=63 Identities=21% Similarity=0.236 Sum_probs=34.4
Q ss_pred HHHHHHHHHHCCCCEEEECCCHHHH--HHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 8988887664089879955311458--9999999624-998999934618999999998889788999999999997726
Q gi|255764463|r 242 AIREASIDIQESADMLLVKPGLPYL--DVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAG 318 (337)
Q Consensus 242 A~~e~~~D~~EGAD~lMVKPa~~yL--Dii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAG 318 (337)
.+.|+..-.++|||++++-|.-|.- ...+.++... ++|+.|- |-++. |.+..+..+|
T Consensus 43 ~~~e~~~a~~~g~D~i~~~~~~~~~~~~~~~~~~~~~~~~pi~a~---------------GGI~~-----~~i~~~~~~G 102 (113)
T 1o4u_A 43 NLEDALRAVEAGADIVMLDNLSPEEVKDISRRIKDINPNVIVEVS---------------GGITE-----ENVSLYDFET 102 (113)
T ss_dssp SHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHHHHCTTSEEEEE---------------ECCCT-----TTGGGGCCTT
T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCEEEEEE---------------CCCCH-----HHHHHHHHCC
T ss_conf 399999999759989984798867799999999975897899997---------------99989-----9999998659
Q ss_pred CCEEEE
Q ss_conf 999982
Q gi|255764463|r 319 CDGIFT 324 (337)
Q Consensus 319 Ad~Iit 324 (337)
||.+..
T Consensus 103 ad~i~~ 108 (113)
T 1o4u_A 103 VDVISS 108 (113)
T ss_dssp CCEEEE
T ss_pred CCEEEC
T ss_conf 899984
No 262
>>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiative, PSI-2; 2.00A {Salmonella typhimurium LT2} (A:122-380)
Probab=22.84 E-value=52 Score=14.10 Aligned_cols=67 Identities=15% Similarity=0.085 Sum_probs=47.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-----CCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECC
Q ss_conf 2889999999999998889367633025633455-----4454215765379999999997301-44798613
Q gi|255764463|r 64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRN-----NTGSHIIDPDNLINEGICAIKKNIP-NIGIITDV 130 (337)
Q Consensus 64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd-----~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DV 130 (337)
.-+++.+.+.++.+.+.|..+|-|=.+-+..+.+ ..+..-.+.-..+.+.++.+++.++ +..++.|.
T Consensus 29 ~~~~~~~~~~a~~~~~~Gf~~iki~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~~~~~~~d~ 101 (259)
T 2o56_A 29 LTEPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEM 101 (259)
T ss_dssp CCSHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCC
T ss_conf 5388888899999886297756531344666665200014665327899999999999998509983143142
No 263
>>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A* (A:)
Probab=22.67 E-value=51 Score=14.14 Aligned_cols=95 Identities=15% Similarity=0.092 Sum_probs=48.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--CEEEECCCCCHHH
Q ss_conf 87863288999999999999888936763302563345544542157653799999999973014--4798613327100
Q gi|255764463|r 59 MPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPN--IGIITDVALDPFT 136 (337)
Q Consensus 59 MPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpd--l~vi~DVcLc~YT 136 (337)
..+....++ .+.++.+.++|+..|-|.+.-+... ...-++.+|+.+-+ +.+.+-.+...+.
T Consensus 11 ~~~~~~~~~---~~~~~~~~~~G~~~vEl~~~~~~~~--------------~~~~~~~i~~~~~~~gl~~~~~~~~~~~~ 73 (290)
T 2qul_A 11 WSTEWMVDF---PATAKRIAGLGFDLMEISLGEFHNL--------------SDAKKRELKAVADDLGLTVMCCIGLKSEY 73 (290)
T ss_dssp SCSSSCCCH---HHHHHHHHHTTCSEEEEESTTGGGS--------------CHHHHHHHHHHHHHHTCEEEEEEEECGGG
T ss_pred EECCCCCCH---HHHHHHHHHHCCCEEEECCCCCCCC--------------CHHHHHHHHHHHHHCCCCCEECCCCCCCC
T ss_conf 617878899---9999999982999999787775658--------------98999999999998599701121444467
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEC
Q ss_conf 114310013654462899999999999999628973524
Q gi|255764463|r 137 IHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAP 175 (337)
Q Consensus 137 ~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAP 175 (337)
. ......-..+..++.+.+..-..++-|+..|.-
T Consensus 74 ~-----~~~~~~~~~~~~~~~~~~~i~~a~~lg~~~i~~ 107 (290)
T 2qul_A 74 D-----FASPDKSVRDAGTEYVKRLLDDCHLLGAPVFAG 107 (290)
T ss_dssp C-----TTCSCHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred C-----CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 9-----899899999999999999999999958956863
No 264
>>3i10_A Putative glycerophosphoryl diester phosphodiesterase; NP_812074.1, structural genomics; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482} (A:1-65,A:105-278)
Probab=22.65 E-value=52 Score=14.08 Aligned_cols=209 Identities=11% Similarity=-0.052 Sum_probs=110.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC
Q ss_conf 54215765379999999997301447986133271001143100136544628999999999999996289735246676
Q gi|255764463|r 100 GSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMM 179 (337)
Q Consensus 100 GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMM 179 (337)
|....-|.|-+.--.++++.-+ =.+-+||-+ |.+|+==+.| .||+- .+..+..+.-+ ==|.=
T Consensus 25 g~~~~~~e~t~~~~~~~~~~~~--~~~e~dv~~---t~d~~~~~~h-------PTL~E----vL~~~~~~i~i--~iEiK 86 (239)
T 3i10_A 25 GNWRSAPENSTAAIDSAIAXKV--DIVEIDIQK---TKDGQLILXH-------PTLEE----ALLTAKGKIXV--NLDKA 86 (239)
T ss_dssp SCTTTSCTTSHHHHHHHHHTTC--SEEEEEEEE---CTTSCEEECS-------CBHHH----HHHHHTTTSEE--EEESC
T ss_pred CCCCCCCCCHHHHHHHHHHCCC--CEEEEEEEE---ECCCCEEEEC-------CCHHH----HHHHHCCCCCC--EEEEC
T ss_conf 9899998431999999998598--989987899---3599789951-------86999----99874034342--47843
Q ss_pred CCHHHHHHHHHHHCCCCC-CCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 779999999998778857-7300336664354301016753102446777744315721147889888876640898799
Q gi|255764463|r 180 DGRVQEIRKKLDSHGHIN-VGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLL 258 (337)
Q Consensus 180 DGrV~aIR~~Ld~~g~~~-~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lM 258 (337)
+.-+..+-+.+.+.|..+ |-+.|......-. +|......+.. ..--.....+....++..-...-..-|++++-
T Consensus 87 ~~~~~~v~~li~~~g~~~~V~~~SF~~~~l~~----~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (239)
T 3i10_A 87 YDIFDDVYAILEKTETQNQVIXKGGQPIETVK----REFGSYLDKVL-YXPVIDLGNKEAEKIITDYLKELRPAAFEIIY 161 (239)
T ss_dssp GGGHHHHHHHHHHHTCGGGEEEEESSCHHHHH----HHHGGGTTTSE-EEEEEETTSTTHHHHHHHHHHHTCCSEEEEEB
T ss_pred CCHHHHHHHHHHHHCCCCCEEEEECCHHHHHH----HHCHHCCCCEE-EEEEEECCCHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 53267899998750866768999699999999----96620264425-65555045055666578887533755256740
Q ss_pred ECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHC
Q ss_conf 553114589999999624998999934618999999998889788999999999997726999982018999999850
Q gi|255764463|r 259 VKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAARILTH 336 (337)
Q Consensus 259 VKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~~L~~ 336 (337)
....+.--..++.+++ -++.+.+|-|-.+.............+. -|-+.-+.+.|.|.|+|=+-..+.++|+.
T Consensus 162 ~~~~~~~~~~v~~~~~-~Gl~V~~wTv~~~~~~~~~~~~~~~~~~----~~~~~~~~~~GVdgIiTD~P~~~~~~l~~ 234 (239)
T 3i10_A 162 SDPKNPLPPKIKQLLF-KKSLIWYNTLWGSLAGNHDDNLALTDPE----KSYGYLIEQLGARILQTDQPAYLLDYLRK 234 (239)
T ss_dssp CCTTCSSHHHHHHHHT-TTSEEEEECSSGGGBTTCCHHHHHHCHH----HHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHH-CCCEEEEEEHHHHHHCCCCCEEEECCCH----HHHHHHHHHCCCCEEEECCHHHHHHHHHH
T ss_conf 5634258999999998-6987999514657657886316521989----99999999659999993979999999997
No 265
>>2v5c_A O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrolase, coiled coil, family 84 glycoside hydrolase, carbohydrate binding module; 2.10A {Clostridium perfringens} PDB: 2cbj_A* 2cbi_A 2vur_A* 2x0y_A* 2j62_A* 2wb5_A* (A:149-404)
Probab=22.54 E-value=52 Score=14.06 Aligned_cols=88 Identities=13% Similarity=0.152 Sum_probs=44.8
Q ss_pred HHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 88999863477888773311666758988110488878632889999999999998889367633025633455445421
Q gi|255764463|r 24 NWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHI 103 (337)
Q Consensus 24 ~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA 103 (337)
+.++.|+..-.=+.=+|+|-| +.|.+..-.-. -+.--+..|...++.+.++|+++|+||. + |-.+..+
T Consensus 59 ~~l~~L~~~~~~~~v~Fv~ai--sPg~~i~~~~~----s~~~d~~~L~~K~~ql~~lGvr~Failf---D---Di~~~~~ 126 (256)
T 2v5c_A 59 QRMQELINASAENKVDFVFGI--SPGIDIRFDGD----AGEEDFNHLITKAESLYDMGVRSFAIYW---D---DIQDKSA 126 (256)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE--CGGGTCCCSTH----HHHHHHHHHHHHHHHHHTTTCCEEEEEC---S---SCSCCCH
T ss_pred HHHHHHHHHHHHCCCCEEECC--CCCCCCCCCCC----CCHHHHHHHHHHHHHHHCCCCCEEEECC---C---CCCCCCH
T ss_conf 999999999997597077524--67767776420----3899999999999999728996899616---7---6664110
Q ss_pred CCCCCHHHHHHHHHHHHHCC
Q ss_conf 57653799999999973014
Q gi|255764463|r 104 IDPDNLINEGICAIKKNIPN 123 (337)
Q Consensus 104 ~n~dglv~rAIr~IK~~fpd 123 (337)
...-.++++-.+.+.+.-++
T Consensus 127 ~~~~~~~n~l~~~~~~~~~~ 146 (256)
T 2v5c_A 127 AKHAQVLNRFNEEFVKAKGD 146 (256)
T ss_dssp HHHHHHHHHHHHHTHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHCCC
T ss_conf 77899999999999984688
No 266
>>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens} (A:149-440)
Probab=22.30 E-value=53 Score=14.03 Aligned_cols=88 Identities=13% Similarity=0.156 Sum_probs=47.6
Q ss_pred HHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 88999863477888773311666758988110488878632889999999999998889367633025633455445421
Q gi|255764463|r 24 NWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHI 103 (337)
Q Consensus 24 ~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA 103 (337)
+.++.|+..-.=+.=+|+|-| +.|.+..-.-.| +.--+..|...++.+.++|+++|+||. + |-.+..+
T Consensus 59 ~~l~~Lv~~~~~~~v~Fv~ai--sPg~~i~~~~~s----~~~d~~~L~~K~~ql~~lGvr~Failf---D---Di~~~~~ 126 (292)
T 2v5d_A 59 QRMQELINASAENKVDFVFGI--SPGIDIRFDGDA----GEEDFNHLITKAESLYDMGVRSFAIYW---D---DIQDKSA 126 (292)
T ss_dssp HHHHHHHHHHHHTTCEEEECC--CCGGGCCCSSBT----THHHHHHHHHHHHHHHHHTCCEEEEEC---S---SCCCCCH
T ss_pred HHHHHHHHHHHHCCCCEEECC--CCCCCCCCCCCC----CHHHHHHHHHHHHHHHHCCCCEEEEEE---E---ECCCCCC
T ss_conf 999999999986688613246--888888888755----799999999999999863876799974---2---0588888
Q ss_pred CCCCCHHHHHHHHHHHHHCC
Q ss_conf 57653799999999973014
Q gi|255764463|r 104 IDPDNLINEGICAIKKNIPN 123 (337)
Q Consensus 104 ~n~dglv~rAIr~IK~~fpd 123 (337)
-..-.++++-.+...+.-++
T Consensus 127 ~~~~~l~n~l~~~~~~~~~~ 146 (292)
T 2v5d_A 127 AKHAQVLNRFNEEFVKAKGD 146 (292)
T ss_dssp HHHHHHHHHHHHHTHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHCCC
T ss_conf 89999999999999974788
No 267
>>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} (A:1-185,A:261-394,A:457-551)
Probab=22.25 E-value=53 Score=14.02 Aligned_cols=130 Identities=16% Similarity=0.123 Sum_probs=84.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC-CCCC-----CCCCC-CHHHHHHHHHHHHHC-CCEEEEC
Q ss_conf 88786328899999999999988893676330256334554-4542-----15765-379999999997301-4479861
Q gi|255764463|r 58 SMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNN-TGSH-----IIDPD-NLINEGICAIKKNIP-NIGIITD 129 (337)
Q Consensus 58 SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~-~Gse-----A~n~d-glv~rAIr~IK~~fp-dl~vi~D 129 (337)
+..+-++-....+.+.+..+.+|||++|-|-|+.+...... .|-. +.++. |-...--+.|++.-. .|.||.|
T Consensus 103 ~~~~~~~g~~~~~~~~l~yl~~lG~~~v~l~P~~~~~~~~~~~gY~~~~~~~~~~~~g~~~~~~~lv~~~h~~gi~vi~D 182 (414)
T 1g5a_A 103 CYVDLFAGDLKGLKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVD 182 (414)
T ss_dssp ECHHHHHSSHHHHHTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred EECCCCCCCHHHHHHCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 96245686899998616798865998899699888999889998487677876701399999999999999886989999
Q ss_pred CCC------------CHHHCCCCCCCCCC-----------CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHH
Q ss_conf 332------------71001143100136-----------5446289999999999999962897352466767799999
Q gi|255764463|r 130 VAL------------DPFTIHGHDGILCD-----------GEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEI 186 (337)
Q Consensus 130 VcL------------c~YT~hGHcGi~~~-----------g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aI 186 (337)
|.+ .-..+.|=||+=-| ...+..++.+.+.+..-...+.+-+++-=...-+.....+
T Consensus 183 ~v~Np~Vr~~l~~~l~~Wld~GVDGFR~Dav~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~gE~~~~~~~~~ 262 (414)
T 1g5a_A 183 FIFNPWVFRAMAGEMLFLANLGVDILRMDAVAFIWKQMGTSCENLPQAHALIRAFNAVMRIAAPAVFFKSEAIVHPDQVV 262 (414)
T ss_dssp ECCSHHHHHHHHHHHHHHHTTTCSEEEETTGGGSCCCTTSCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECCCSCHHHHG
T ss_pred ECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH
T ss_conf 89799999999999755041378678861554444467876556601699999877777753898058641257767654
Q ss_pred H
Q ss_conf 9
Q gi|255764463|r 187 R 187 (337)
Q Consensus 187 R 187 (337)
+
T Consensus 263 ~ 263 (414)
T 1g5a_A 263 Q 263 (414)
T ss_dssp G
T ss_pred H
T ss_conf 4
No 268
>>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str} (A:)
Probab=22.19 E-value=53 Score=14.02 Aligned_cols=37 Identities=8% Similarity=-0.162 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH
Q ss_conf 1478898888766408987995531145899999996
Q gi|255764463|r 238 NVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKE 274 (337)
Q Consensus 238 n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~ 274 (337)
+.++++..+..-+++|||++=|=|+-+..+--..++.
T Consensus 21 ~~~~~~~~a~~~~~~GA~iIDIG~g~~~~~~~e~~~~ 57 (153)
T 2k4m_A 21 MWNDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKH 57 (153)
T ss_dssp HHHHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHH
T ss_conf 7788999999715999768999336888999999875
No 269
>>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, enolase superfamily, TIM barrel; 1.90A {Polaromonas SP} PDB: 3cb3_A* (A:141-365)
Probab=21.81 E-value=54 Score=13.97 Aligned_cols=135 Identities=16% Similarity=0.189 Sum_probs=71.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHH
Q ss_conf 888786328899999999999988893676330256334554454215765379999999997301-4479861332710
Q gi|255764463|r 57 NSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPF 135 (337)
Q Consensus 57 ~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~Y 135 (337)
.+.+.+..-+.+.+.+++++..+.|.++|-+=.+..... -....|+++++.++ ++.++.|.-- .+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~Kikig~~~~~-------------~d~~~i~~~re~~g~~~~l~iDan~-~~ 78 (225)
T 2og9_A 13 NTSGGFLHTPIDQLXVNASASIERGIGGIKLKVGQPDGA-------------LDIARVTAVRKHLGDAVPLXVDANQ-QW 78 (225)
T ss_dssp BCTTCCTTSCHHHHHHHHHHHHHTTCCCEEEECCCSCHH-------------HHHHHHHHHHHHHCTTSCEEEECTT-CC
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH-------------HHHHHHHHHHHCCCCCCEEECCCCC-CC
T ss_conf 110345531489999999999974886313444441177-------------7665555433036875335114333-43
Q ss_pred HCC---------CCCCCC--CC------------------CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHH
Q ss_conf 011---------431001--36------------------5446289999999999999962897352466767799999
Q gi|255764463|r 136 TIH---------GHDGIL--CD------------------GEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEI 186 (337)
Q Consensus 136 T~h---------GHcGi~--~~------------------g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aI 186 (337)
|.. -+.++. .+ -.|--|+++..+....-....-++|+|-|-=+--|-+...
T Consensus 79 ~~~~a~~~~~~l~~~~~~~iEeP~~~~d~~~~~~l~~~~~~pia~dE~~~~~~~~~~~~~~~~~d~i~~k~~~~GGit~~ 158 (225)
T 2og9_A 79 DRPTAQRXCRIFEPFNLVWIEEPLDAYDHEGHAALALQFDTPIATGEXLTSAAEHGDLIRHRAADYLXPDAPRVGGITPF 158 (225)
T ss_dssp CHHHHHHHHHHHGGGCCSCEECCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHH
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHH
T ss_conf 31379999986403475011586322222333322212214531033336723566565430354465344456779999
Q ss_pred HHHHHHCCCCCCCEECHHH
Q ss_conf 9999877885773003366
Q gi|255764463|r 187 RKKLDSHGHINVGIMPYVA 205 (337)
Q Consensus 187 R~~Ld~~g~~~~~ImsYsa 205 (337)
++..+...-.++.++.++.
T Consensus 159 ~~i~~~a~~~gi~v~~~~~ 177 (225)
T 2og9_A 159 LKIASLAEHAGLXLAPHFA 177 (225)
T ss_dssp HHHHHHHHHTTCEECCCSC
T ss_pred HHHHHHHHHCCCEEEECHH
T ss_conf 9999999986997984749
No 270
>>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} (A:1-128)
Probab=21.80 E-value=54 Score=13.97 Aligned_cols=68 Identities=21% Similarity=0.216 Sum_probs=51.5
Q ss_pred CCCCCC-HHHHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 315721-1478898888766408987995---53114589999999624-99899993461899999999888978
Q gi|255764463|r 232 YYLDPA-NVQEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 232 YQmd~~-n~~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
++...+ +..+|+.. ..+.--|.+++ =|++.=+++++++|+.. ..|+...-..++-.....|.+.|..+
T Consensus 32 ~~v~~a~~~~~a~~~---~~~~~~dliilD~~lP~~~G~el~~~i~~~~~~~~iiilt~~~~~~~~~~a~~~Ga~~ 104 (128)
T 1a04_A 32 TVVGEASNGEQGIEL---AESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADG 104 (128)
T ss_dssp EEEEEESSHHHHHHH---HHHHCCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEEEECCCCHHHHHHHHHTTCSE
T ss_pred EEEEEECCHHHHHHH---HHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCE
T ss_conf 899997999999999---9856982899732477432222222222233456643456779999999999869989
No 271
>>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} (A:94-212)
Probab=21.61 E-value=55 Score=13.94 Aligned_cols=76 Identities=12% Similarity=0.169 Sum_probs=54.0
Q ss_pred HHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCC------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEE
Q ss_conf 999999987788577300336664354301016753102------44677774431572114788988887664089879
Q gi|255764463|r 184 QEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTR------DLLKGDKKTYYLDPANVQEAIREASIDIQESADML 257 (337)
Q Consensus 184 ~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~------p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~l 257 (337)
-+++.++...|..++++|+=.+-..|.||---=...+-. +.+.-.=..-..+.......+++...-.++|+|.+
T Consensus 2 ~a~~~a~~~~~~~kVgilaT~~T~~s~~y~~~l~~~~~~v~~~~~~~lv~~I~~~~~~~~~~~~~~~~~~~~~~~~~d~i 81 (119)
T 1b73_A 2 PGVKEALKKSRNKKIGVIGTPATVKSGAYQRKLEEGGADVFAKACPLFAPLAEEGLLEGEITRKVVEHYLKEFKGKIDTL 81 (119)
T ss_dssp HHHHHHHHHCSSCEEEEEECHHHHHHCHHHHHHHTTSCEEEEEECCCCTTTSCGGGGSGGGHHHHHHHHSTTTTTTCSEE
T ss_pred HHHHHHHHCCCCCEEEEEEEHHHHHCHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEE
T ss_conf 76788864466736899970103215699999973558599308568899998153246378999999998754048689
Q ss_pred EE
Q ss_conf 95
Q gi|255764463|r 258 LV 259 (337)
Q Consensus 258 MV 259 (337)
..
T Consensus 82 iL 83 (119)
T 1b73_A 82 IL 83 (119)
T ss_dssp EE
T ss_pred EE
T ss_conf 99
No 272
>>3cny_A Inositol catabolism protein IOLE; NP_786806.1, xylose isomerase-like TIM barrel, structural genomics; 1.85A {Lactobacillus plantarum WCFS1} (A:)
Probab=21.59 E-value=55 Score=13.94 Aligned_cols=144 Identities=8% Similarity=-0.147 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCC------CCC------CCCCCCC-CH-------HHHHHHHHHHHHCC-CEEE
Q ss_conf 99999999998889367633025633455------445------4215765-37-------99999999973014-4798
Q gi|255764463|r 69 VAVEKIKQVADLGIPAIAIFPNIPMDLRN------NTG------SHIIDPD-NL-------INEGICAIKKNIPN-IGII 127 (337)
Q Consensus 69 ~L~~eie~~~~lGI~av~LFp~I~~~~Kd------~~G------seA~n~d-gl-------v~rAIr~IK~~fpd-l~vi 127 (337)
.+.+.++.+.++|+..|-|++. +.+.+. ..| ..-++++ .. +.++++..|.--.. +.+.
T Consensus 32 ~l~e~~~~~~~~G~~~iEl~~~-~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lg~~~v~~~ 110 (301)
T 3cny_A 32 NLQQLLSDIVVAGFQGTEVGGF-FPGPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPVAVVS 110 (301)
T ss_dssp CHHHHHHHHHHHTCCEECCCTT-CCCHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHCCCEEEECCC-CCCHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_conf 9999999999859899998997-899899999999809900140246654320024577888889999998403635554
Q ss_pred ECCCCCHHHCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHHCCCCEEECC--CCCCCHHHHHHHHHHHCCCCCCCEECH
Q ss_conf 61332710011431001365--44628999999999999996289735246--676779999999998778857730033
Q gi|255764463|r 128 TDVALDPFTIHGHDGILCDG--EIVNDETIELISHAAVIQADAGADIIAPS--EMMDGRVQEIRKKLDSHGHINVGIMPY 203 (337)
Q Consensus 128 ~DVcLc~YT~hGHcGi~~~g--~IdND~Tl~~L~k~Al~~A~AGaDivAPS--dMMDGrV~aIR~~Ld~~g~~~~~ImsY 203 (337)
+..+-+....-......... +...+..++.+.+.+-..++.|..+.-=. ..+-.....++..++..+..+++++-=
T Consensus 111 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~~~~~~~~~gl~~D 190 (301)
T 3cny_A 111 EQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHHHXGTGIQTKEETDRLXANTDPKLVGLLYD 190 (301)
T ss_dssp ECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSSSCSHHHHHHHHHTSCTTTCEEEEE
T ss_pred ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEECCCCCHHHHHHHHCCCCEEEEEEE
T ss_conf 02444202556776677888889999999999999999998659715885255500023421567765147525878885
Q ss_pred HHHHHHHHHC
Q ss_conf 6664354301
Q gi|255764463|r 204 VAKFNSSFYG 213 (337)
Q Consensus 204 saKfaS~fYg 213 (337)
..-+.-.-+.
T Consensus 191 ~~H~~~~~~d 200 (301)
T 3cny_A 191 TGHIAVSDGD 200 (301)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHHCC
T ss_conf 0677764044
No 273
>>1k44_A Nucleoside diphosphate kinase; nucleoside triphosphate, transferase; 2.60A {Mycobacterium tuberculosis} (A:)
Probab=21.53 E-value=37 Score=15.07 Aligned_cols=46 Identities=17% Similarity=0.321 Sum_probs=36.7
Q ss_pred EEECCCCCCCHHHHHHHHHHHCCCC--CCCEECHHHHHHHHHHCCHHH
Q ss_conf 3524667677999999999877885--773003366643543010167
Q gi|255764463|r 172 IIAPSEMMDGRVQEIRKKLDSHGHI--NVGIMPYVAKFNSSFYGPYRD 217 (337)
Q Consensus 172 ivAPSdMMDGrV~aIR~~Ld~~g~~--~~~ImsYsaKfaS~fYgPFRd 217 (337)
+|=|..+-.|+++.|-+.+.++||. ..-.+..+-..+..||...++
T Consensus 8 iIKPdav~~~~~g~Il~~i~~~Gf~I~~~k~~~ls~e~a~~~Y~~~~~ 55 (136)
T 1k44_A 8 LIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEG 55 (136)
T ss_dssp EECHHHHHTTCHHHHHHHHHHTTCEEEEEEEECCCHHHHHHHTGGGTT
T ss_pred EECCCHHCCCCHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHCC
T ss_conf 989204304889999999998599999998541999999999999848
No 274
>>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genomics, protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A (A:123-274)
Probab=21.50 E-value=20 Score=16.91 Aligned_cols=119 Identities=10% Similarity=0.092 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCC----------------
Q ss_conf 9999999999988893676330256334554454215765379999999997301447986133----------------
Q gi|255764463|r 68 DVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVA---------------- 131 (337)
Q Consensus 68 d~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVc---------------- 131 (337)
+.+...++.+.+.|.+.|-+=.+ +.+ ...++++++.+|++-++.|..
T Consensus 6 e~~~~~~~~~~~~G~~~~K~kvg-~~d----------------~~~~~aire~g~~~~l~~D~n~~~~~~~a~~l~~~~~ 68 (152)
T 2okt_A 6 GLSNKQLESLKATKPTRIKLKWT-PQI----------------MHQIRVLRELDFHFQLVIDANESLDRQDFTQLQLLAR 68 (152)
T ss_dssp SCCHHHHHHHHHHCCSEEEEECC-TTH----------------HHHHHHHTTSSSCCEEEEECTTCCCGGGHHHHHHHGG
T ss_pred CCHHHHHHHHHHHCCCEEEEEEC-CCH----------------HHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 33399999998733313665306-136----------------9999973432113565530356765246677765545
Q ss_pred ------CCHHHCCCCCCCCCC---CCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEEC
Q ss_conf ------271001143100136---54462899999999999999628973524667677999999999877885773003
Q gi|255764463|r 132 ------LDPFTIHGHDGILCD---GEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMP 202 (337)
Q Consensus 132 ------Lc~YT~hGHcGi~~~---g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~Ims 202 (337)
-+|....-+++.+.. -.|--|+++..+....-......+|+|-|-=+.-|-+...++......-.++.++.
T Consensus 69 ~~~~~~E~P~~~~~~~~~~~~~~~~pia~dE~~~~~~~~~~~i~~~a~d~i~~~~~~~GGit~~~~i~~~A~~~gi~~~~ 148 (152)
T 2okt_A 69 EQVLYIEEPFKDISMLDEVADGTIPPIALDEKATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHGAKVVI 148 (152)
T ss_dssp GCEEEEECCCSSGGGGGGSCTTSSCCEEESTTCCCHHHHHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECHHHHCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 55688861245646677876517754124534378899999986389888997904509999999999999986997999
Q ss_pred H
Q ss_conf 3
Q gi|255764463|r 203 Y 203 (337)
Q Consensus 203 Y 203 (337)
.
T Consensus 149 h 149 (152)
T 2okt_A 149 G 149 (152)
T ss_dssp B
T ss_pred E
T ss_conf 2
No 275
>>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} (A:1-284)
Probab=20.97 E-value=42 Score=14.75 Aligned_cols=59 Identities=14% Similarity=0.210 Sum_probs=36.4
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCEEC------------HHHHHHHHHHCCHHHHHHC-CCCCCCCCCCCCC
Q ss_conf 667677999999999877885773003------------3666435430101675310-2446777744315
Q gi|255764463|r 176 SEMMDGRVQEIRKKLDSHGHINVGIMP------------YVAKFNSSFYGPYRDAIST-RDLLKGDKKTYYL 234 (337)
Q Consensus 176 SdMMDGrV~aIR~~Ld~~g~~~~~Ims------------YsaKfaS~fYgPFRdA~~S-~p~~~gdr~sYQm 234 (337)
.-|.|-+|-++..+|++.||.++.|+= -+...|-.|+.-...-+++ +|.-.|--.+|-.
T Consensus 204 ~NlfDA~vDa~~~Al~k~g~~~v~ivVsEtGWPs~G~~~at~~nA~~Yn~nli~h~~~GTP~rP~~i~~yiF 275 (284)
T 1aq0_A 204 QNLFDTTVDAFYTAMGKHGGSSVKLVVSESGWPSGGGTAATPANARFYNQHLINHVGRGTPRHPGAIETYIF 275 (284)
T ss_dssp CSHHHHHHHHHHHHHHTTTCTTCCEEEEECCCCSSSSTTCCHHHHHHHHHHHHHHTTTBCSSSBSCCCBEES
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
T ss_conf 999999999999999970899853888534555579988899999999999999974689899897228997
No 276
>>3ffj_A Glycosyl hydrolase (family 31); APC21248, structural genomics, PSI-2, protein structure initiative; 1.94A {Ruminococcus obeum atcc 29174} (A:161-320,A:378-490)
Probab=20.69 E-value=57 Score=13.82 Aligned_cols=140 Identities=11% Similarity=0.068 Sum_probs=97.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCH--HHHHHHHHHHHHCCCEEEECCCC--CHHHC--
Q ss_conf 2889999999999998889367633025633455445421576537--99999999973014479861332--71001--
Q gi|255764463|r 64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNL--INEGICAIKKNIPNIGIITDVAL--DPFTI-- 137 (337)
Q Consensus 64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dgl--v~rAIr~IK~~fpdl~vi~DVcL--c~YT~-- 137 (337)
..+.+.+.+.++...+.||+.-. | .++..-.+..|.-.+|++.+ ....|+.+++.-=.++++.+-.. ++.+.
T Consensus 14 ~~t~~~i~~~~~~~~~~gip~d~-i-~iD~gw~~~~gdf~~d~~~fP~~~~~i~~lh~~G~~~~lw~~P~i~~~~~s~~~ 91 (273)
T 3ffj_A 14 YTTKEDFRAVAKGYRENHIPIDX-I-YXDIDYXQDFKDFTVNEKNFPDFPEFVKEXKDQELRLIPIIDAGVKVEKGYEVY 91 (273)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCE-E-EECGGGSSTTCTTCCCTTTCTTHHHHHHHHHTTTCEEEEEEESCEECCTTCHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCE-E-EECHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHH
T ss_conf 79999999999988973897368-9-983068668883477831289989999999975997999978873777883789
Q ss_pred ----------CCCCCCCC----------CCCCCHHHHHHHHHHHHHHHHHCCCCEE-----ECCCCCCC-------HHHH
Q ss_conf ----------14310013----------6544628999999999999996289735-----24667677-------9999
Q gi|255764463|r 138 ----------HGHDGILC----------DGEIVNDETIELISHAAVIQADAGADII-----APSEMMDG-------RVQE 185 (337)
Q Consensus 138 ----------hGHcGi~~----------~g~IdND~Tl~~L~k~Al~~A~AGaDiv-----APSdMMDG-------rV~a 185 (337)
...+|... -=+..|.++.+-+.++...+.+.|.|.+ -|+++-.+ -.++
T Consensus 92 ~~~~~~~~~~~~~~g~~~~~~~~~g~~~~lD~~np~a~~~~~~~~~~l~~~GvDg~k~D~~e~~~~~~~~n~y~~~~~~~ 171 (273)
T 3ffj_A 92 EEGVKNNYFCKREDGSDFVAAVWPGDTHFPDXLNPEARKWFGDKYRFLIDQGIEGFWNDXNEPAIFYSSHNLFGYNXTRA 171 (273)
T ss_dssp HHHHHTTCBCBCTTSCBCCEEETTEEEECBCTTSHHHHHHHHHTTHHHHTTTCCEEEEESTTTCCSEEHGGGHHHHHHHH
T ss_pred HHHHHCCEEEECCCCCEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99987891787799982366645998630268887899999999999986598279961899753567701758999999
Q ss_pred HHHHHHHCCC-CCCCEECHHH
Q ss_conf 9999987788-5773003366
Q gi|255764463|r 186 IRKKLDSHGH-INVGIMPYVA 205 (337)
Q Consensus 186 IR~~Ld~~g~-~~~~ImsYsa 205 (337)
+++++.+.+- ...-++|-|+
T Consensus 172 ~~~~~~~~~~~~r~~~~~rs~ 192 (273)
T 3ffj_A 172 AGEAFERIDPEKRFLXFSRSS 192 (273)
T ss_dssp HHHHHHHHCTTCCCEEEESSE
T ss_pred HHHHHHHHCCCCCEEEEECCC
T ss_conf 999999725787617984465
No 277
>>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transferase; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A (A:1-276)
Probab=20.63 E-value=57 Score=13.81 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=36.3
Q ss_pred HHHHHHHHCCCCEEEE--------CCCHHHHHHHHHHHHHCCCCEEEE--ECCHHHHHHHHHH
Q ss_conf 8888766408987995--------531145899999996249989999--3461899999999
Q gi|255764463|r 244 REASIDIQESADMLLV--------KPGLPYLDVCFRIKEKFGLPTFAY--QVSGEYAMIKAAS 296 (337)
Q Consensus 244 ~e~~~D~~EGAD~lMV--------KPa~~yLDii~~~k~~~~~P~~aY--qVSGEYami~~a~ 296 (337)
..++.=...|-+.++. -|...-|..|..+|++|++||..| |--|..+.+-+.+
T Consensus 165 ~Av~~i~~~g~~~viLhC~s~yp~~~~~~nL~~i~~lk~~~~~pVIG~sdHs~~~~~~~aAva 227 (276)
T 2wqp_A 165 KSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGXNDLSEAFPDAIIGLSDHTLDNYACLGAVA 227 (276)
T ss_dssp HHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEECCSSSSHHHHHHHH
T ss_pred CEEEEHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHH
T ss_conf 000001202666437885068865321101344345555413351340452001113478884
No 278
>>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structure initiative; 1.70A {Escherichia coli} (A:1-81,A:140-356)
Probab=20.61 E-value=57 Score=13.80 Aligned_cols=216 Identities=16% Similarity=0.093 Sum_probs=104.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCC-----C-CHHHHHHHHHHHHHHH-HHCCC-
Q ss_conf 45421576537999999999730144798613327100114310013654-----4-6289999999999999-96289-
Q gi|255764463|r 99 TGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGE-----I-VNDETIELISHAAVIQ-ADAGA- 170 (337)
Q Consensus 99 ~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~-----I-dND~Tl~~L~k~Al~~-A~AGa- 170 (337)
.|.....|.|-+.---++++..+ =.|-+||.+ |.+|+==+.||.. | -.++=++......... -..|.
T Consensus 37 rg~~~~~~ent~~a~~~~~~~g~--~~~e~d~~~---t~dg~~v~~hd~~~~~~~iptL~Evl~~~~~~~~~~~~~~~l~ 111 (298)
T 1ydy_A 37 RGASGYLPEHTLPAKAMAYAQGA--DYLEQDLVM---TKDDNLVVLHDHYKSDFRVHTFEEEIEFVQGLNHSTGKNIGIY 111 (298)
T ss_dssp TTTTTTSSTTCHHHHHHHHHTTC--SEEEEEEEE---CTTSCEEECSSSBCSCCCCCBHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHCCC--CEEEEEEEE---CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 89888997227999999998597--989987688---0589879704751677656769999999887676408984010
Q ss_pred -CEEECCCCC---CCHHHHHHHHHHHCCCCC----CCEECHHHHHHHHHHCCHHHHHHC----------------C---C
Q ss_conf -735246676---779999999998778857----730033666435430101675310----------------2---4
Q gi|255764463|r 171 -DIIAPSEMM---DGRVQEIRKKLDSHGHIN----VGIMPYVAKFNSSFYGPYRDAIST----------------R---D 223 (337)
Q Consensus 171 -DivAPSdMM---DGrV~aIR~~Ld~~g~~~----~~ImsYsaKfaS~fYgPFRdA~~S----------------~---p 223 (337)
++=.|..-+ -.....+.+.|.+.+..+ +.|.|...-..-.+-.-+-..... . .
T Consensus 112 iEiK~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~rvii~SFd~~~l~~lr~~~p~~~~~~~~l~~l~~~~~~~~~~~~~~ 191 (298)
T 1ydy_A 112 PEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQP 191 (298)
T ss_dssp EEECCHHHHHHTTCCHHHHHHHHHHHTTCCSTTSSBEEEESCHHHHHHHHHTHHHHHTCCCEEEEEECCGGGCCCEEECT
T ss_pred CCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHCCCCC
T ss_conf 14577520111010288999999998455666643898318999999999974856433543033202354101001344
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHH-----------HHHHHHHHHHHCCCCEEEEECCHHHHHH
Q ss_conf 46777744315721147889888876640898799553114-----------5899999996249989999346189999
Q gi|255764463|r 224 LLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLP-----------YLDVCFRIKEKFGLPTFAYQVSGEYAMI 292 (337)
Q Consensus 224 ~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~-----------yLDii~~~k~~~~~P~~aYqVSGEYami 292 (337)
...++..+|.--+. .+....+..|||.+...-.+- -=..|+.+++ .++.|.+|-|--|=.|-
T Consensus 192 ~~~~~~~~~~~~~~------~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~lv~~ah~-~Gl~V~~WTv~~~~~~~ 264 (298)
T 1ydy_A 192 DGSWVNYNYDWMFK------PGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQ-NKLVVHPYTVRSDKLPE 264 (298)
T ss_dssp TSCEEECCCGGGGS------TTHHHHHTTTCSEEEEBGGGTBCTTCBTTBCCBCSHHHHHHH-TTCEECCBCBCTTSCCT
T ss_pred CCCCCCCCHHHHCC------HHHHHHHHHHCCEECCCHHHCCCCCCCCCCCCCHHHHHHHHH-CCCEEEEECCCCHHHHH
T ss_conf 33234541565407------678999985277621436422543356544479999999998-79999997558868876
Q ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHH
Q ss_conf 9999888978899999999999772699998201899999985
Q gi|255764463|r 293 KAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAARILT 335 (337)
Q Consensus 293 ~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~~L~ 335 (337)
+ ..+..-|.+.-+.++|.|.|||=+.-.+.+||+
T Consensus 265 ------~---~~~~~~e~~~~l~~~GVDGIiTD~P~~~~~~l~ 298 (298)
T 1ydy_A 265 ------Y---TPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLN 298 (298)
T ss_dssp ------T---CSSHHHHHHHHHTTSCCSEEEESCHHHHHHHHC
T ss_pred ------H---CCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHC
T ss_conf ------3---358999999999865987999888989999769
No 279
>>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} (A:)
Probab=20.55 E-value=57 Score=13.80 Aligned_cols=71 Identities=14% Similarity=-0.012 Sum_probs=51.3
Q ss_pred CCCCCC-HHHHHHHHHHHH----HHCCCCEEEEC---CCHHHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHHHHCCC
Q ss_conf 315721-147889888876----64089879955---3114589999999624---998999934618999999998889
Q gi|255764463|r 232 YYLDPA-NVQEAIREASID----IQESADMLLVK---PGLPYLDVCFRIKEKF---GLPTFAYQVSGEYAMIKAASLQGW 300 (337)
Q Consensus 232 YQmd~~-n~~eA~~e~~~D----~~EGAD~lMVK---Pa~~yLDii~~~k~~~---~~P~~aYqVSGEYami~~a~~~g~ 300 (337)
|+...+ |..||+.-.... ..+.-|++.+- |.+.-+++++.+|+.. .+|+..+-.++.-..+..+-+.|.
T Consensus 35 ~~v~~a~~g~eal~~l~~~~~~~~~~~pdliilD~~mP~~~G~~l~~~ir~~~~~~~iPVI~lt~~~~~~~~~~a~~~G~ 114 (149)
T 1i3c_A 35 HELIILRDGLAAXAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHV 114 (149)
T ss_dssp EEEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTC
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCC
T ss_conf 18999899999999999620100367899899808999986479999999587878983899827899999999998699
Q ss_pred CC
Q ss_conf 78
Q gi|255764463|r 301 IN 302 (337)
Q Consensus 301 ~d 302 (337)
-+
T Consensus 115 ~~ 116 (149)
T 1i3c_A 115 NC 116 (149)
T ss_dssp SE
T ss_pred CE
T ss_conf 88
No 280
>>1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} (A:)
Probab=20.52 E-value=49 Score=14.28 Aligned_cols=28 Identities=14% Similarity=0.054 Sum_probs=16.4
Q ss_pred HHHHHHHHHHCCCC--CCCEECHHHHHHHH
Q ss_conf 99999999877885--77300336664354
Q gi|255764463|r 183 VQEIRKKLDSHGHI--NVGIMPYVAKFNSS 210 (337)
Q Consensus 183 V~aIR~~Ld~~g~~--~~~ImsYsaKfaS~ 210 (337)
+.+||+.+.++||. +||+|.++..|.-.
T Consensus 9 ~~~ir~~f~~~G~~EV~tP~l~~~~~~~~~ 38 (275)
T 1usy_A 9 VFSFYSKATKKGFSPFFVPALEKAEEPAGN 38 (275)
T ss_dssp HHHHHHHHHHTTCEECCCCSEEECSSCCSS
T ss_pred HHHHHHHHHHCCCCEEECCCEEEEECCCCC
T ss_conf 999999999759956467652221020056
No 281
>>1yvu_A Hypothetical protein AQ_1447; RNAse H fold, RNA binding protein, gene regulation; 2.90A {Aquifex aeolicus VF5} (A:9-17,A:109-167,A:270-307)
Probab=20.49 E-value=33 Score=15.40 Aligned_cols=68 Identities=26% Similarity=0.321 Sum_probs=39.5
Q ss_pred HHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHH-----HHHHHH--------HHHHHHCCCCEEEECCCHHHHHHHH
Q ss_conf 666435430101675310244677774431572114-----788988--------8876640898799553114589999
Q gi|255764463|r 204 VAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANV-----QEAIRE--------ASIDIQESADMLLVKPGLPYLDVCF 270 (337)
Q Consensus 204 saKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~-----~eA~~e--------~~~D~~EGAD~lMVKPa~~yLDii~ 270 (337)
--||-|.||.-|||-..-. . .+|+---++--|. .|..-- ++--++|-||++-..||- -|.+|+
T Consensus 12 kdkfisdfykkfrdkitvq--g-knrkialipevnekvlkseegyfllhldlkfriqpfenevadivr~epgk-rlnlir 87 (106)
T 1yvu_A 12 KDKFISDFYKKFRDKITVQ--G-KNRKIALIPEVNEKVLKSEEGYFLLHLDLKFRIQPFENEVADIVRXEPGK-RLNLIR 87 (106)
T ss_dssp HHHHHHHHHHHHHHHHEEE--C-SSCEEEEEEEEEEEEEEBSSSCEEEEEEEEEEEEESSHHHTSTTSCCHHH-HHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCC--C-CCCCEEEEECCCEEEEECCHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHH-HHHHHH
T ss_conf 0468887306556566656--4-55786885054048984110889898774147888999999987889899-999999
Q ss_pred HHHHH
Q ss_conf 99962
Q gi|255764463|r 271 RIKEK 275 (337)
Q Consensus 271 ~~k~~ 275 (337)
-+-.+
T Consensus 88 yilrr 92 (106)
T 1yvu_A 88 YILRR 92 (106)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999
No 282
>>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} (A:1-109)
Probab=20.29 E-value=58 Score=13.76 Aligned_cols=68 Identities=24% Similarity=0.242 Sum_probs=50.7
Q ss_pred CCCCC-CHHHHHHHHHHHHHHCCCCEEEEC---CCHHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf 31572-114788988887664089879955---3114589999999624--99899993461899999999888978
Q gi|255764463|r 232 YYLDP-ANVQEAIREASIDIQESADMLLVK---PGLPYLDVCFRIKEKF--GLPTFAYQVSGEYAMIKAASLQGWIN 302 (337)
Q Consensus 232 YQmd~-~n~~eA~~e~~~D~~EGAD~lMVK---Pa~~yLDii~~~k~~~--~~P~~aYqVSGEYami~~a~~~g~~d 302 (337)
|..+. .|..||+.... ++--|.+.+- |++.=+++++.+|+.. ..|+..+-.+++-.....|-+.|..+
T Consensus 29 ~~v~~a~~g~eal~~~~---~~~~dlillD~~mP~~dG~e~~~~lr~~~~~~~~ii~lt~~~~~~~~~~a~~~Ga~~ 102 (109)
T 1dz3_A 29 EVIGTAYNGQDCLQMLE---EKRPDILLLDIIMPHLDGLAVLERIRAGFEHQPNVIMLTAFGQEDVTKKAVELGASY 102 (109)
T ss_dssp EEEEEESSHHHHHHHHH---HHCCSEEEEESCCSSSCHHHHHHHHHHHCSSCCEEEEEEETTCHHHHHHHHHTTCEE
T ss_pred EEEEEECCHHHHHHHHH---HCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCE
T ss_conf 79999899999999998---269999999557899989999999984699999599997649999999999879989
No 283
>>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei} (A:122-286)
Probab=20.23 E-value=58 Score=13.75 Aligned_cols=139 Identities=12% Similarity=0.034 Sum_probs=86.2
Q ss_pred HHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCC-CCEECHHHHHHHHHHCC---HHHHHHCCCCCCCCCCCCCCC
Q ss_conf 99999996289735246676779999999998778857-73003366643543010---167531024467777443157
Q gi|255764463|r 160 HAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHIN-VGIMPYVAKFNSSFYGP---YRDAISTRDLLKGDKKTYYLD 235 (337)
Q Consensus 160 k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~-~~ImsYsaKfaS~fYgP---FRdA~~S~p~~~gdr~sYQmd 235 (337)
++.-...+.|++++..-..-.+--..++.+-...+..- +.-.+..++.+.+...- +..+....... ......-..
T Consensus 16 ~~v~~a~~~g~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~ 94 (165)
T 3gnn_A 16 QYVDRIADTRARILDTRKTLPGLRLAQKYAVRVGGGANQRLALYAGILIKENHIAAAGGVGEALDAAFAL-NAEVPVQIE 94 (165)
T ss_dssp HHHHHTTTSSCCEECCSCCCTTCHHHHHHHHHHTTCCCC-------------------CHHHHHHHHHHH-C--CCCEEE
T ss_pred HHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHEECHHHHHCCCCCCCCCHHHHHC-CCCCEEEEE
T ss_conf 9999856998635525201200688875555310663565777622031345552146643111123330-465048875
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 21147889888876640898799553114589999999624-99899993461899999999888978899999999999
Q gi|255764463|r 236 PANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAF 314 (337)
Q Consensus 236 ~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~ 314 (337)
..+..|+.+. .+.|+|++++=|.-+ -+....++..+ ++|+.|- |-++. |.+..+
T Consensus 95 ~~t~~e~~~A----~~~g~d~v~l~~~~~-t~~~~~~~~~~~~ipi~a~---------------GGI~~-----~~i~~~ 149 (165)
T 3gnn_A 95 VETLDQLRTA----LAHGARSVLLDNFTL-DMMRDAVRVTEGRAVLEVS---------------GGVNF-----DTVRAI 149 (165)
T ss_dssp ESSHHHHHHH----HHTTCEEEEEESCCH-HHHHHHHHHHTTSEEEEEE---------------SSCST-----TTHHHH
T ss_pred ECCHHHHHHH----HHCCCCEEHHCCCCH-HHHHHHHHHHCCCEEEEEE---------------CCCCH-----HHHHHH
T ss_conf 1668888999----862886511158999-9999999974795799997---------------89989-----999999
Q ss_pred HHHCCCEEEE
Q ss_conf 7726999982
Q gi|255764463|r 315 KRAGCDGIFT 324 (337)
Q Consensus 315 kRAGAd~Iit 324 (337)
+.+|||.+..
T Consensus 150 ~~~Ga~~v~v 159 (165)
T 3gnn_A 150 AETGVDRISI 159 (165)
T ss_dssp HHTTCSEEEC
T ss_pred HHCCCCEEEC
T ss_conf 9759999985
No 284
>>2d2r_A Undecaprenyl pyrophosphate synthase; prenyltransferase; 1.88A {Helicobacter pylori} PDB: 2dtn_A (A:)
Probab=20.16 E-value=41 Score=14.77 Aligned_cols=72 Identities=7% Similarity=0.108 Sum_probs=41.5
Q ss_pred EEECCCCCEEECCCCCCCC--CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 6675898811048887863--288999999999999888936763302563345544542157653799999999973
Q gi|255764463|r 45 FLTSGEKTVESINSMPDVM--RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKN 120 (337)
Q Consensus 45 FV~eg~~~k~~I~SMPGv~--R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~ 120 (337)
||.||..---....++... +.+.+.+.+.++-+.++||+.|-+|-.-.++.|... -.-+.++.-+.+.++..
T Consensus 21 iImDGnrR~A~~~~~~~~~gh~~g~~~l~~i~~wc~~~GI~~vtvY~fs~~n~~r~~----~ev~~L~~l~~~~~~~~ 94 (245)
T 2d2r_A 21 IIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK----SEVDFLMKMLKKYLKDE 94 (245)
T ss_dssp EECCCHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTTCSEEEEECC--------------CHHHHHHHHHHHHHHH
T ss_pred EECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHCCCCH----HHHHHHHHHHHHHHHHH
T ss_conf 961486999988799777999999999999999998779618998852023226635----89999999999887644
Done!