HHsearch results for GI: 255764463 and protein with PDBid: 1l6s_A

>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=100.00  E-value=0  Score=1084.78  Aligned_cols=318  Identities=43%  Similarity=0.685  Sum_probs=311.6

Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf             88585631289889998634778887733116667589881104888786328899999999999988893676330256
Q gi|255764463|r   13 CHRRMRRNRKSNWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIP   92 (337)
Q Consensus        13 p~~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~   92 (337)
                      ..+||||||+|+|+|+||+||+|+++|||||+||+||.+.++||+||||+||||+|.|++++++++++||++|+|||+ |
T Consensus         3 ~~~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PlFV~eg~~~~e~I~SMPGi~R~Sid~l~~~i~~~~~lGI~av~LFpv-~   81 (323)
T 1l6s_A            3 LIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGI-S   81 (323)
T ss_dssp             CSCCGGGGGSSHHHHHHHCCCCCCGGGEEEEEEEETTCSSCEECTTSTTCEEEEGGGHHHHHHHHHHHTCCEEEEEEE-C
T ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCHHHCEEEEEEEECCCCCEECCCCCCCEEECHHHHHHHHHHHHHCCCCCEEEECC-C
T ss_conf             141666358987999998607988899553149921899833468999966758999999999999779760454354-6


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf             33455445421576537999999999730144798613327100114310013654462899999999999999628973
Q gi|255764463|r   93 MDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADI  172 (337)
Q Consensus        93 ~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDi  172 (337)
                       ++||+.|++|||+||++|||||.||+.||||+|||||||||||+||||||++++.||||+|+++|+||||+||+||||+
T Consensus        82 -~~Kd~~GseA~n~~glv~rair~iK~~~pdl~vi~DVcLc~YT~hGHcGil~~~~idND~Tl~~L~k~Al~~A~AGaDi  160 (323)
T 1l6s_A           82 -HHTDETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGADF  160 (323)
T ss_dssp             -SSCBSSCGGGGSTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBSSCCSSCBCSSSBCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred             -CCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf             -7789974241498658999999998408977387414326676888741201677575899999999999999817981


Q ss_pred             EECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             52466767799999999987788577300336664354301016753102446777744315721147889888876640
Q gi|255764463|r  173 IAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQE  252 (337)
Q Consensus       173 vAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~E  252 (337)
                      |||||||||||++||++||++||++|+|||||+||||+||||||||++|+| + |||+||||||+|++||++|+.+|++|
T Consensus       161 VAPSdMMDGrV~aIR~~Ld~~g~~~~~ImSYsaKyaS~fYGPFRdA~~S~~-~-gdr~sYQmd~~n~~eA~~e~~~D~~E  238 (323)
T 1l6s_A          161 IAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSAL-K-GDRKSYQMNPMNRREAIRESLLDEAQ  238 (323)
T ss_dssp             EEECSCCTTHHHHHHHHHHHTTCTTCEEBCCCEEBCCSCCHHHHHHHTCCC-S-SCCTTTSBCTTCHHHHHHHHHHHHHT
T ss_pred             CCCHHCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCHHHHHHCCCC-C-CCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf             251310565999999999976986751321023434513452778844878-8-99852105877668999986031442


Q ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHH
Q ss_conf             89879955311458999999962499899993461899999999888978899999999999772699998201899999
Q gi|255764463|r  253 SADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAAR  332 (337)
Q Consensus       253 GAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~  332 (337)
                      |||||||||||||||||+++|++|++|++||||||||||||+|+++||+|++++++|+|++|||||||+||||||+|+|+
T Consensus       239 GAD~lmVKPa~~yLDii~~~k~~~~~Pv~aYqVSGEYamikaaa~~g~~d~~~~~~E~l~~~kRAGAd~IiTY~A~~~a~  318 (323)
T 1l6s_A          239 GADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAE  318 (323)
T ss_dssp             TCSBEEEESCTTCHHHHHHHHTTCSSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCSEEEETTHHHHHH
T ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHH
T ss_conf             98658840441378899999982699889997528999999999869975676999999999862999998707899999


Q ss_pred             --HH
Q ss_conf             --98
Q gi|255764463|r  333 --IL  334 (337)
Q Consensus       333 --~L  334 (337)
                        ||
T Consensus       319 ~~~~  322 (323)
T 1l6s_A          319 KKIL  322 (323)
T ss_dssp             TTSC
T ss_pred             HHHC
T ss_conf             8740