HHsearch results for GI: 255764463 and protein with PDBid: 1l6s_A
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=100.00 E-value=0 Score=1084.78 Aligned_cols=318 Identities=43% Similarity=0.685 Sum_probs=311.6
Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 88585631289889998634778887733116667589881104888786328899999999999988893676330256
Q gi|255764463|r 13 CHRRMRRNRKSNWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIP 92 (337)
Q Consensus 13 p~~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~ 92 (337)
..+||||||+|+|+|+||+||+|+++|||||+||+||.+.++||+||||+||||+|.|++++++++++||++|+|||+ |
T Consensus 3 ~~~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PlFV~eg~~~~e~I~SMPGi~R~Sid~l~~~i~~~~~lGI~av~LFpv-~ 81 (323)
T 1l6s_A 3 LIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGI-S 81 (323)
T ss_dssp CSCCGGGGGSSHHHHHHHCCCCCCGGGEEEEEEEETTCSSCEECTTSTTCEEEEGGGHHHHHHHHHHHTCCEEEEEEE-C
T ss_pred CCCCCCCCCCCHHHHHHHHCCCCCHHHCEEEEEEEECCCCCEECCCCCCCEEECHHHHHHHHHHHHHCCCCCEEEECC-C
T ss_conf 141666358987999998607988899553149921899833468999966758999999999999779760454354-6
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf 33455445421576537999999999730144798613327100114310013654462899999999999999628973
Q gi|255764463|r 93 MDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADI 172 (337)
Q Consensus 93 ~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDi 172 (337)
++||+.|++|||+||++|||||.||+.||||+|||||||||||+||||||++++.||||+|+++|+||||+||+||||+
T Consensus 82 -~~Kd~~GseA~n~~glv~rair~iK~~~pdl~vi~DVcLc~YT~hGHcGil~~~~idND~Tl~~L~k~Al~~A~AGaDi 160 (323)
T 1l6s_A 82 -HHTDETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGADF 160 (323)
T ss_dssp -SSCBSSCGGGGSTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBSSCCSSCBCSSSBCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred -CCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf -7789974241498658999999998408977387414326676888741201677575899999999999999817981
Q ss_pred EECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 52466767799999999987788577300336664354301016753102446777744315721147889888876640
Q gi|255764463|r 173 IAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQE 252 (337)
Q Consensus 173 vAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~E 252 (337)
|||||||||||++||++||++||++|+|||||+||||+||||||||++|+| + |||+||||||+|++||++|+.+|++|
T Consensus 161 VAPSdMMDGrV~aIR~~Ld~~g~~~~~ImSYsaKyaS~fYGPFRdA~~S~~-~-gdr~sYQmd~~n~~eA~~e~~~D~~E 238 (323)
T 1l6s_A 161 IAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSAL-K-GDRKSYQMNPMNRREAIRESLLDEAQ 238 (323)
T ss_dssp EEECSCCTTHHHHHHHHHHHTTCTTCEEBCCCEEBCCSCCHHHHHHHTCCC-S-SCCTTTSBCTTCHHHHHHHHHHHHHT
T ss_pred CCCHHCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCHHHHHHCCCC-C-CCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 251310565999999999976986751321023434513452778844878-8-99852105877668999986031442
Q ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHH
Q ss_conf 89879955311458999999962499899993461899999999888978899999999999772699998201899999
Q gi|255764463|r 253 SADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAAR 332 (337)
Q Consensus 253 GAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~ 332 (337)
|||||||||||||||||+++|++|++|++||||||||||||+|+++||+|++++++|+|++|||||||+||||||+|+|+
T Consensus 239 GAD~lmVKPa~~yLDii~~~k~~~~~Pv~aYqVSGEYamikaaa~~g~~d~~~~~~E~l~~~kRAGAd~IiTY~A~~~a~ 318 (323)
T 1l6s_A 239 GADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAE 318 (323)
T ss_dssp TCSBEEEESCTTCHHHHHHHHTTCSSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCSEEEETTHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHH
T ss_conf 98658840441378899999982699889997528999999999869975676999999999862999998707899999
Q ss_pred --HH
Q ss_conf --98
Q gi|255764463|r 333 --IL 334 (337)
Q Consensus 333 --~L 334 (337)
||
T Consensus 319 ~~~~ 322 (323)
T 1l6s_A 319 KKIL 322 (323)
T ss_dssp TTSC
T ss_pred HHHC
T ss_conf 8740