HHsearch results for GI: 255764463 and protein with PDBid: 1o66_A
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=94.83 E-value=0.22 Score=29.08 Aligned_cols=138 Identities=12% Similarity=0.194 Sum_probs=56.9
Q ss_pred CCCCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCH
Q ss_conf 48887-86328899999999999988893676330256334554454215765379999999997301447986133271
Q gi|255764463|r 56 INSMP-DVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDP 134 (337)
Q Consensus 56 I~SMP-Gv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~ 134 (337)
|..|| |-|+-+.+.+++....+.+.|-.+|-+=+.. -+...|+.|.+. .|-|++-+-|-|
T Consensus 82 i~DmPf~sy~~~~~~~~~~A~~l~~~gadavk~eg~~-----------------~~~~~i~~l~~~--gIPV~gHiGL~P 142 (275)
T 1o66_A 82 VSDLPFGAYQQSKEQAFAAAAELMAAGAHMVKLEGGV-----------------WMAETTEFLQMR--GIPVCAHIGLTP 142 (275)
T ss_dssp EEECCTTSSSSCHHHHHHHHHHHHHTTCSEEEEECSG-----------------GGHHHHHHHHHT--TCCEEEEEESCG
T ss_pred EECCCHHHCCCHHHHHHHHHHHHHHCCCCCEECCCHH-----------------HHHHHHHHHHHC--CCCEEEECCCCC
T ss_conf 9467701022539999999999986485511325506-----------------589999999987--996687404675
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECH-HHHHHHHHHC
Q ss_conf 001143100136544628999999999999996289735246676779999999998778857730033-6664354301
Q gi|255764463|r 135 FTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPY-VAKFNSSFYG 213 (337)
Q Consensus 135 YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsY-saKfaS~fYg 213 (337)
.+.+---|.-..|+- .++ ..|-+.|..+-+|||..|--..+-.---+.|.+. .++++.+. |.+++..=+=
T Consensus 143 q~~~~~GG~r~~gk~-~e~--~~l~~~ak~lE~AGa~aivlE~Vp~eva~~It~~------l~IPtIGIGaG~~cDGQvL 213 (275)
T 1o66_A 143 QSVFAFGGYKVQGRG-GKA--QALLNDAKAHDDAGAAVVLMECVLAELAKKVTET------VSCPTIGIGAGADCDGQVL 213 (275)
T ss_dssp GGTTC------------CH--HHHHHHHHHHHHTTCSEEEEESCCHHHHHHHHHH------CSSCEEEESSCSCSSEEEE
T ss_pred EEEECCCCEECCCCH-HHH--HHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH------CCCCEEECCCCCCCCEEEE
T ss_conf 254405862214641-567--8999999999966762664103647789999853------5765653577998877878
Q ss_pred CHHHHHHC
Q ss_conf 01675310
Q gi|255764463|r 214 PYRDAIST 221 (337)
Q Consensus 214 PFRdA~~S 221 (337)
=+-|.+|-
T Consensus 214 v~~DiLG~ 221 (275)
T 1o66_A 214 VMHDMLGI 221 (275)
T ss_dssp CHHHHTTC
T ss_pred EHHHHHCC
T ss_conf 59965288