HHsearch results for GI: 255764463 and protein with PDBid: 2d69_A
>2d69_A Ribulose bisphosphate carboxylase; alpha/beta barrel, structural genomics, NPPSFA; 1.90A {Pyrococcus horikoshii OT3} SCOP: c.1.14.1 d.58.9.1 PDB: 2cxe_A 2cwx_A
Probab=94.70 E-value=0.1 Score=31.37 Aligned_cols=187 Identities=16% Similarity=0.187 Sum_probs=114.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHC--CC--EEEECCCCCH-HHC------CCCCCCCC-----CC----CC---CHHHHHHHH
Q ss_conf 215765379999999997301--44--7986133271-001------14310013-----65----44---628999999
Q gi|255764463|r 102 HIIDPDNLINEGICAIKKNIP--NI--GIITDVALDP-FTI------HGHDGILC-----DG----EI---VNDETIELI 158 (337)
Q Consensus 102 eA~n~dglv~rAIr~IK~~fp--dl--~vi~DVcLc~-YT~------hGHcGi~~-----~g----~I---dND~Tl~~L 158 (337)
+.|.++|+-+-..-.+-+.|. .+ +-+.|+-|-+ |.. .|-.|+=+ +. -| .---|.+.+
T Consensus 91 ~~f~~~~l~~lL~~i~Gn~~~~~~v~~iRL~Di~lP~~~~~~f~GP~fGi~G~R~~lgv~~RPL~gtiiKPk~GLsp~~~ 170 (430)
T 2d69_A 91 TLFEEGSLVQLFSAVAGNVFGMKALKNLRLLDFHPPYEYLRHFKGPQFGVQGIREFMGVKDRPLTATVPKPKMGWSVEEY 170 (430)
T ss_dssp GGSCTTCHHHHHHHHTTGGGGCTTEEEEEEEEEECCHHHHTTCCCCSSHHHHHHHHHTCCSSCEEEECCSSSSCCCHHHH
T ss_pred HHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCHHHH
T ss_conf 87688858899999987056654233478961358999984689998676899998489888425414578768897999
Q ss_pred HHHHHHHHHCCCCEEE--------CCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCC
Q ss_conf 9999999962897352--------46676779999999998778857730033666435430101675310244677774
Q gi|255764463|r 159 SHAAVIQADAGADIIA--------PSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKK 230 (337)
Q Consensus 159 ~k~Al~~A~AGaDivA--------PSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~ 230 (337)
++++-.++..|+|+|- |-.=+.-||.++.++++.. -.-.|.|+
T Consensus 171 a~~~~~~~~GGvD~IKDDE~l~d~~~~p~~eRv~~v~~ai~~a-----------------------------~~eTG~~~ 221 (430)
T 2d69_A 171 AEIAYELWSGGIDLLKDDENFTSFPFNRFEERVRKLYRVRDRV-----------------------------EAETGETK 221 (430)
T ss_dssp HHHHHHHHHTTCSEEECCTTCSCBTTBCHHHHHHHHHHHHHHH-----------------------------HHHHSSCC
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-----------------------------HHHHCCCC
T ss_conf 9999999814877245776678987676899999999999999-----------------------------99768800
Q ss_pred CCCCCCCH-HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH---CCCCEEEEECCHHHHHHHHHHHCCCCCHHHH
Q ss_conf 43157211-4788988887664089879955311458999999962---4998999934618999999998889788999
Q gi|255764463|r 231 TYYLDPAN-VQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEK---FGLPTFAYQVSGEYAMIKAASLQGWINKNDA 306 (337)
Q Consensus 231 sYQmd~~n-~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~---~~~P~~aYqVSGEYami~~a~~~g~~d~~~~ 306 (337)
-|-.+... ..|-++.++.=.+.|++.+||-|...-++.++.+++. +.+|+ -+|-+|--++-. .-..|+ +. .
T Consensus 222 ~Ya~NIT~~~~em~~ra~~~~~~G~~~vmv~~~~~G~~al~~lr~~~~~~~l~I-haHra~~ga~tr-~~~~Gi-s~--~ 296 (430)
T 2d69_A 222 EYLINITGPVNIMEKRAEMVANEGGQYVMIDIVVAGWSALQYMREVTEDLGLAI-HAHRAMHAAFTR-NPRHGI-TM--L 296 (430)
T ss_dssp EEECBCCSSHHHHHHHHHHHHHHTCCEEEEEHHHHCHHHHHHHHHHHHHHTCEE-EEECTTTHHHHS-CTTSEE-CH--H
T ss_pred EEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEE-EECCCCCCCCCC-CCCCCC-CH--H
T ss_conf 799864687556789999999759957950455562489999998666477278-753355631015-888870-79--9
Q ss_pred HHHHHHHHHHHCCCEEEE
Q ss_conf 999999997726999982
Q gi|255764463|r 307 MMESLLAFKRAGCDGIFT 324 (337)
Q Consensus 307 ~~E~l~~~kRAGAd~Iit 324 (337)
++ -.-.+=||||.|++
T Consensus 297 vl--~kL~RLaGaD~ih~ 312 (430)
T 2d69_A 297 AL--AKAARMIGVDQIHT 312 (430)
T ss_dssp HH--HHHHHHHTCSEEEC
T ss_pred HH--HHHHHHCCCCEEEC
T ss_conf 99--99999829883341