Query         gi|255764463|ref|YP_003064765.2| delta-aminolevulinic acid dehydratase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 337
No_of_seqs    171 out of 1711
Neff          4.7 
Searched_HMMs 23785
Date          Mon May 30 09:04:21 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 255764463.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1w5q_A Delta-aminolevulinic ac 100.0       0       0 1117.1  33.6  328    9-337     7-336 (337)
  2 3obk_A Delta-aminolevulinic ac 100.0       0       0 1104.0  34.8  327   10-337    20-348 (360)
  3 1w1z_A Delta-aminolevulinic ac 100.0       0       0 1104.2  31.6  323   10-335     6-328 (328)
  4 1l6s_A Porphobilinogen synthas 100.0       0       0 1084.8  30.6  318   13-334     3-322 (323)
  5 1h7n_A 5-aminolaevulinic acid  100.0       0       0 1068.7  35.0  328    9-337    10-341 (342)
  6 1pv8_A Delta-aminolevulinic ac 100.0       0       0 1070.0  29.7  324   12-336     2-329 (330)
  7 1ykw_A Rubisco-like protein; b  96.7   0.012 5.1E-07   37.6   8.7  158  111-324   152-321 (435)
  8 2qyg_A Ribulose bisphosphate c  96.2   0.057 2.4E-06   33.1  10.2  160  111-324   172-341 (452)
  9 3l5l_A Xenobiotic reductase A;  95.9    0.11 4.7E-06   31.1  10.4  177   70-289   160-355 (363)
 10 2ze3_A DFA0005; organic waste   95.9    0.12   5E-06   30.9  11.4  133  164-319   100-255 (275)
 11 3kdn_A Rubisco, ribulose bisph  95.7    0.05 2.1E-06   33.5   7.9  185  106-326    98-317 (444)
 12 1wdd_A Ribulose bisphosphate c  94.9    0.24   1E-05   28.8   9.3  186  104-324   108-328 (477)
 13 1o66_A 3-methyl-2-oxobutanoate  94.8    0.22 9.3E-06   29.1   9.0  138   56-221    82-221 (275)
 14 2d69_A Ribulose bisphosphate c  94.7     0.1 4.3E-06   31.4   7.0  187  102-324    91-312 (430)
 15 3nwr_A A rubisco-like protein;  94.5    0.11 4.7E-06   31.1   6.8  136  153-324   174-318 (432)
 16 2oem_A 2,3-diketo-5-methylthio  94.2    0.28 1.2E-05   28.4   8.4  136  153-324   152-299 (413)
 17 3eoo_A Methylisocitrate lyase;  94.1    0.38 1.6E-05   27.5  11.1  110  182-319   140-262 (298)
 18 2zvi_A 2,3-diketo-5-methylthio  94.1    0.35 1.5E-05   27.7   8.6  139  152-325   165-314 (425)
 19 3fk4_A Rubisco-like protein; s  94.1    0.27 1.1E-05   28.5   8.0  139  152-324   152-300 (414)
 20 3c6c_A 3-keto-5-aminohexanoate  93.6    0.27 1.1E-05   28.5   7.3   93   30-129    10-103 (316)
 21 3bg3_A Pyruvate carboxylase, m  93.5    0.17 7.2E-06   29.9   6.1  105   60-196   253-363 (718)
 22 1xg4_A Probable methylisocitra  93.1    0.55 2.3E-05   26.4  13.8   78  182-287   136-213 (295)
 23 3no5_A Uncharacterized protein  92.8     0.4 1.7E-05   27.4   7.1   79   42-127     4-82  (275)
 24 1lt8_A Betaine-homocysteine me  92.4    0.43 1.8E-05   27.1   6.9  214   68-322    54-296 (406)
 25 3chv_A Prokaryotic domain of u  92.4    0.49   2E-05   26.8   7.1   80   42-128     8-87  (284)
 26 1zlp_A PSR132, petal death pro  91.3    0.42 1.7E-05   27.2   5.8   49  238-287   187-235 (318)
 27 2xed_A Putative maleate isomer  90.9    0.33 1.4E-05   27.9   5.0  164  110-295    79-251 (273)
 28 3b8i_A PA4872 oxaloacetate dec  90.5    0.44 1.9E-05   27.1   5.3  206   59-321    25-259 (287)
 29 2hjp_A Phosphonopyruvate hydro  89.7    0.28 1.2E-05   28.4   3.8   81  239-319   165-258 (290)
 30 3lye_A Oxaloacetate acetyl hyd  88.8     0.7 2.9E-05   25.7   5.3   83  239-322   177-273 (307)
 31 3ajx_A 3-hexulose-6-phosphate   87.9     1.6 6.7E-05   23.3  10.9  168   65-324    10-185 (207)
 32 3iix_A Biotin synthetase, puta  87.5     1.7 7.1E-05   23.1   9.1   55   60-124    79-133 (348)
 33 2ehh_A DHDPS, dihydrodipicolin  86.9     1.1 4.5E-05   24.4   5.3  160   65-283    18-184 (294)
 34 2qiw_A PEP phosphonomutase; NP  86.8     1.8 7.8E-05   22.9   8.6   69  238-323   166-234 (255)
 35 1xky_A Dihydrodipicolinate syn  86.2       2 8.3E-05   22.7  11.4  163   63-285    28-197 (301)
 36 3ih1_A Methylisocitrate lyase;  85.3     2.2 9.2E-05   22.4  12.9   80  239-319   174-266 (305)
 37 3noe_A DAP-A, dihydrodipicolin  85.2       2 8.3E-05   22.7   5.9  111   63-204    17-134 (292)
 38 3o1n_A 3-dehydroquinate dehydr  84.9     2.3 9.5E-05   22.3   7.5  214   27-294    11-240 (276)
 39 2eq5_A 228AA long hypothetical  84.5     2.4   1E-04   22.1  11.0  176  107-294    20-212 (228)
 40 1o5k_A DHDPS, dihydrodipicolin  83.9     2.1   9E-05   22.4   5.7  115   64-209    29-150 (306)
 41 3js3_A 3-dehydroquinate dehydr  83.2     2.7 0.00011   21.8  10.2  170   65-285    29-209 (258)
 42 2yxg_A DHDPS, dihydrodipicolin  83.1     2.6 0.00011   21.8   5.8  117   64-211    17-140 (289)
 43 3e02_A Uncharacterized protein  82.9     1.9   8E-05   22.8   5.0   66   52-128    20-86  (311)
 44 1s2w_A Phosphoenolpyruvate pho  82.7     2.8 0.00012   21.7   8.4  131  109-284    66-216 (295)
 45 3e96_A Dihydrodipicolinate syn  82.1     2.3 9.6E-05   22.2   5.2  109   63-203    28-143 (316)
 46 3ixl_A Amdase, arylmalonate de  81.6       3 0.00013   21.4   7.1  160  109-296    54-220 (240)
 47 2r8w_A AGR_C_1641P; APC7498, d  80.4     3.3 0.00014   21.1   5.9  135   31-207    27-170 (332)
 48 1vrd_A Inosine-5'-monophosphat  80.3     3.4 0.00014   21.1  10.5   94   71-202   239-345 (494)
 49 1vyr_A Pentaerythritol tetrani  80.3     3.4 0.00014   21.1  12.3  168   67-277   160-341 (364)
 50 3ble_A Citramalate synthase fr  79.8     3.2 0.00014   21.2   5.3   27   64-90     37-65  (337)
 51 1xxx_A DHDPS, dihydrodipicolin  79.7     3.5 0.00015   21.0   5.7  141   63-231    30-176 (303)
 52 3m5v_A DHDPS, dihydrodipicolin  79.6     3.5 0.00015   21.0  10.9  117   64-211    24-148 (301)
 53 1rqb_A Transcarboxylase 5S sub  79.6     3.5 0.00015   21.0   8.5  232   59-327   108-363 (539)
 54 3e49_A Uncharacterized protein  79.5     3.6 0.00015   20.9   5.6   53   65-124    29-82  (311)
 55 2hmc_A AGR_L_411P, dihydrodipi  78.9     3.7 0.00016   20.8   6.5  112   63-207    42-161 (344)
 56 2o7s_A DHQ-SDH, bifunctional 3  77.5     4.1 0.00017   20.5   6.4  101   79-194    56-174 (523)
 57 2r91_A 2-keto-3-deoxy-(6-phosp  76.4     4.3 0.00018   20.3   6.1  148   64-276    15-169 (286)
 58 3f4w_A Putative hexulose 6 pho  76.4     4.4 0.00018   20.3  13.0  170   64-324     9-186 (211)
 59 2cw6_A Hydroxymethylglutaryl-C  76.1     4.4 0.00019   20.3   6.1   26  155-180   155-180 (298)
 60 3lot_A Uncharacterized protein  75.9     4.5 0.00019   20.3   6.8   72   43-126     7-83  (314)
 61 3eb2_A Putative dihydrodipicol  75.4     4.6 0.00019   20.2   6.0  110   63-203    20-136 (300)
 62 3hgj_A Chromate reductase; TIM  75.2     4.7  0.0002   20.1  13.4  168   69-276   153-335 (349)
 63 3flu_A DHDPS, dihydrodipicolin  75.1     4.7  0.0002   20.1   6.0  112   63-205    23-141 (297)
 64 2x7v_A Probable endonuclease 4  74.7     4.8  0.0002   20.1   5.0   92   70-174    14-107 (287)
 65 1oy0_A Ketopantoate hydroxymet  74.7     4.8  0.0002   20.1   9.0  140   55-222    98-240 (281)
 66 3bsm_A Mandelate racemase/muco  74.0       5 0.00021   19.9   6.5  151   49-201   112-313 (413)
 67 2rfg_A Dihydrodipicolinate syn  73.7     5.1 0.00021   19.9   6.4  117   64-211    17-140 (297)
 68 3cpr_A Dihydrodipicolinate syn  73.5     5.1 0.00022   19.9   5.5  117   64-211    33-156 (304)
 69 1z41_A YQJM, probable NADH-dep  72.8     5.3 0.00022   19.8  13.4   52   71-122   147-209 (338)
 70 1jvn_A Glutamine, bifunctional  72.5     5.4 0.00023   19.7   6.2   87  232-336   439-545 (555)
 71 3fa4_A 2,3-dimethylmalate lyas  72.5     5.4 0.00023   19.7   5.9   81  239-320   169-263 (302)
 72 1l6w_A Fructose-6-phosphate al  72.4     1.4 5.9E-05   23.7   1.8   93   66-202    64-164 (220)
 73 3ffs_A Inosine-5-monophosphate  72.2     5.5 0.00023   19.7   6.6   15  159-173   195-209 (400)
 74 1mxs_A KDPG aldolase; 2-keto-3  72.1     4.2 0.00018   20.5   4.2  130   67-281    37-170 (225)
 75 1wbh_A KHG/KDPG aldolase; lyas  71.8     5.4 0.00023   19.7   4.7  130   67-281    27-160 (214)
 76 2dgd_A 223AA long hypothetical  71.7     5.2 0.00022   19.8   4.6  120  167-295    87-214 (223)
 77 5rub_A Rubisco (ribulose-1,5-b  71.2     5.6 0.00024   19.6   4.7  146  153-325   195-347 (490)
 78 2pln_A HP1043, response regula  71.2     5.8 0.00024   19.5   6.4   65  232-300    43-109 (137)
 79 1ps9_A 2,4-dienoyl-COA reducta  70.2     6.1 0.00026   19.4  12.1  165   68-275   141-326 (671)
 80 1xi3_A Thiamine phosphate pyro  70.1     6.1 0.00026   19.3   6.3   65  236-324   115-189 (215)
 81 2vc6_A MOSA, dihydrodipicolina  69.8     6.2 0.00026   19.3   5.9  115   64-211    17-140 (292)
 82 3d0c_A Dihydrodipicolinate syn  67.9     6.7 0.00028   19.1   5.7  109   63-203    28-143 (314)
 83 1w3i_A EDA, 2-keto-3-deoxy glu  67.2       7 0.00029   19.0   5.2  111   64-207    16-133 (293)
 84 1f6k_A N-acetylneuraminate lya  67.1       7 0.00029   19.0   6.7  116   63-209    19-142 (293)
 85 3cyv_A URO-D, UPD, uroporphyri  66.5     7.2  0.0003   18.9   5.4  182  107-324   121-324 (354)
 86 3ez4_A 3-methyl-2-oxobutanoate  66.0     7.3 0.00031   18.8  11.3   93  238-336    98-199 (269)
 87 2ojp_A DHDPS, dihydrodipicolin  65.9     7.4 0.00031   18.8   5.2  115   63-208    17-138 (292)
 88 2zic_A Dextran glucosidase; TI  65.9     7.4 0.00031   18.8   5.6  104   66-175    29-193 (543)
 89 1wx0_A Transaldolase; structur  65.5     5.6 0.00023   19.6   3.7   67   66-175    71-137 (223)
 90 1yad_A Regulatory protein TENI  65.4     7.5 0.00032   18.7   5.4   55  249-323   126-190 (221)
 91 3kts_A Glycerol uptake operon   65.4     7.5 0.00032   18.7   6.6   55  251-325   125-179 (192)
 92 1ua7_A Alpha-amylase; beta-alp  65.1     7.6 0.00032   18.7   6.2  111   63-173    12-170 (422)
 93 3khj_A Inosine-5-monophosphate  65.0     7.7 0.00032   18.7   6.9   44  159-202   156-212 (361)
 94 1mdl_A Mandelate racemase; iso  63.8       8 0.00034   18.5   4.8   63   55-130   133-196 (359)
 95 1vpx_A Protein (transaldolase   63.8     5.9 0.00025   19.4   3.6   67   66-175    74-140 (230)
 96 3fkr_A L-2-keto-3-deoxyarabona  63.0     8.3 0.00035   18.4   6.4  111   63-204    24-144 (309)
 97 2v82_A 2-dehydro-3-deoxy-6-pho  62.5     4.3 0.00018   20.3   2.7   71   65-176    16-88  (212)
 98 2qdd_A Mandelate racemase/muco  61.6     5.9 0.00025   19.4   3.3   77   42-131   121-198 (378)
 99 3b2n_A Uncharacterized protein  61.6       5 0.00021   19.9   2.9   64  236-302    35-102 (133)
100 3daq_A DHDPS, dihydrodipicolin  61.4     8.8 0.00037   18.3   5.6  117   64-211    19-142 (292)
101 2qjj_A Mandelate racemase/muco  61.4     8.9 0.00037   18.3   6.3   93   42-136   103-216 (402)
102 1m53_A Isomaltulose synthase;   61.3     8.9 0.00037   18.2   6.1   80   40-132    24-115 (570)
103 1gjw_A Maltodextrin glycosyltr  61.3     8.9 0.00037   18.2   6.8   96   37-134    82-206 (637)
104 3eeg_A 2-isopropylmalate synth  61.0       9 0.00038   18.2   5.9   59  155-213   150-223 (325)
105 3a5f_A Dihydrodipicolinate syn  60.4     5.4 0.00023   19.7   2.9  119   65-211    19-141 (291)
106 3dz1_A Dihydrodipicolinate syn  60.1     9.3 0.00039   18.1   6.1  118   63-209    24-146 (313)
107 1qtw_A Endonuclease IV; DNA re  59.6     9.5  0.0004   18.0   6.7   93   69-174    13-107 (285)
108 1zco_A 2-dehydro-3-deoxyphosph  59.4     9.6  0.0004   18.0   7.4   78   43-136    23-100 (262)
109 1vhc_A Putative KHG/KDPG aldol  59.4     6.3 0.00026   19.3   3.1  132   66-281    27-161 (224)
110 1nvm_A HOA, 4-hydroxy-2-oxoval  59.1     9.7 0.00041   18.0   6.1   25  156-180   149-173 (345)
111 1wa3_A 2-keto-3-deoxy-6-phosph  59.1     4.8  0.0002   20.0   2.4  154   65-323    19-176 (205)
112 3cz5_A Two-component response   58.5     9.9 0.00042   17.9   8.9   92  236-335    37-138 (153)
113 1vr6_A Phospho-2-dehydro-3-deo  57.5      10 0.00043   17.8   7.6   62   66-132   118-179 (350)
114 1jcn_A Inosine monophosphate d  57.1      10 0.00044   17.8  10.6   96   68-201   254-362 (514)
115 2oog_A Glycerophosphoryl diest  56.7      11 0.00044   17.7  13.6  130  176-336   143-280 (287)
116 2yw3_A 4-hydroxy-2-oxoglutarat  55.9     6.5 0.00027   19.2   2.7   38  245-282   116-156 (207)
117 1r3s_A URO-D, uroporphyrinogen  55.9      11 0.00046   17.6   7.4   74  108-182   132-223 (367)
118 2czd_A Orotidine 5'-phosphate   55.5      11 0.00046   17.6   7.1   79   65-178     9-87  (208)
119 1j93_A UROD, uroporphyrinogen   55.4      11 0.00047   17.6   5.5   73  109-181   129-218 (353)
120 3b4u_A Dihydrodipicolinate syn  55.3      11 0.00047   17.6   5.3  114   64-205    20-141 (294)
121 2nuw_A 2-keto-3-deoxygluconate  54.7      11 0.00048   17.5   5.9  115   63-210    15-136 (288)
122 1r30_A Biotin synthase; SAM ra  53.7      12  0.0005   17.4   7.5   57   61-125    95-151 (369)
123 2qsj_A DNA-binding response re  51.9     8.5 0.00036   18.4   2.7   47  254-300    51-101 (154)
124 1vlj_A NADH-dependent butanol   51.1      13 0.00054   17.1   5.3   15  266-280   339-353 (407)
125 3mz2_A Glycerophosphoryl diest  50.4      13 0.00056   17.1  14.0  139  177-336   138-277 (292)
126 3h7c_X Agmatine deiminase; str  49.7       7 0.00029   19.0   2.0   39  111-149   193-237 (383)
127 2qxy_A Response regulator; reg  49.6      14 0.00057   17.0   6.2   69  231-302    28-100 (142)
128 3cwn_A Transaldolase B; direct  49.3      14 0.00058   17.0   3.6   77  102-186   121-205 (337)
129 3eul_A Possible nitrate/nitrit  48.7      14 0.00059   16.9   9.0   92  236-335    47-148 (152)
130 2nx9_A Oxaloacetate decarboxyl  48.0      14 0.00061   16.8   8.8   51   60-121   150-200 (464)
131 3eod_A Protein HNR; response r  47.5      14 0.00057   17.0   3.2   66  232-300    32-102 (130)
132 2v9d_A YAGE; dihydrodipicolini  47.5      15 0.00062   16.8   5.7  117   64-211    48-171 (343)
133 1o5o_A Uracil phosphoribosyltr  47.0      15 0.00063   16.7   5.9   56   67-140   149-205 (221)
134 1ydn_A Hydroxymethylglutaryl-C  46.3      15 0.00064   16.7   6.0   24   64-87     22-45  (295)
135 1wpc_A Glucan 1,4-alpha-maltoh  45.8      16 0.00065   16.6   5.9   65   67-132    24-105 (485)
136 1qkk_A DCTD, C4-dicarboxylate   45.6      16 0.00066   16.6   4.7   69  232-303    28-101 (155)
137 2jk1_A HUPR, hydrogenase trans  45.1      10 0.00042   17.9   2.2   69  231-302    24-98  (139)
138 2yr1_A 3-dehydroquinate dehydr  44.6      16 0.00068   16.5  10.5  175   65-289    29-211 (257)
139 1q7z_A 5-methyltetrahydrofolat  43.9      17  0.0007   16.4  14.7  173  149-324   245-437 (566)
140 3m47_A Orotidine 5'-phosphate   43.8      17  0.0007   16.4   6.7   96   66-196    23-119 (228)
141 2qgq_A Protein TM_1862; alpha-  43.8      17  0.0007   16.4   4.3   34   56-89     23-57  (304)
142 1eep_A Inosine 5'-monophosphat  43.7      17  0.0007   16.4  11.0   69  109-202   180-261 (404)
143 3ewb_X 2-isopropylmalate synth  43.0      17 0.00072   16.3   5.4   31   62-92     21-52  (293)
144 2rjn_A Response regulator rece  42.4      17 0.00074   16.3   3.8   69  231-302    31-104 (154)
145 3f6c_A Positive transcription   41.8      16 0.00068   16.5   2.9   64  236-302    32-99  (134)
146 3ktc_A Xylose isomerase; putat  41.7     8.6 0.00036   18.3   1.5   22  152-173   103-124 (333)
147 2csu_A 457AA long hypothetical  41.6      18 0.00076   16.2   4.1   83   55-145    57-156 (457)
148 3dhu_A Alpha-amylase; structur  41.4      18 0.00076   16.2   5.9  106   66-174    28-170 (449)
149 3k13_A 5-methyltetrahydrofolat  40.1      19  0.0008   16.0   6.4  185   63-263    32-257 (300)
150 1i5e_A Uracil phosphoribosyltr  40.0      19  0.0008   16.0   5.4   50   67-134   137-186 (209)
151 3cwo_X Beta/alpha-barrel prote  40.0      19  0.0008   16.0   3.1   55  263-336   160-222 (237)
152 3gk0_A PNP synthase, pyridoxin  39.1      20 0.00082   15.9   3.7   47   41-88    114-161 (278)
153 2oz8_A MLL7089 protein; struct  38.7      20 0.00083   15.9   6.1  164   61-297   140-309 (389)
154 1u83_A Phosphosulfolactate syn  38.7      20 0.00084   15.9   3.5  140   65-261    50-193 (276)
155 1f89_A 32.5 kDa protein YLR351  37.9      20 0.00086   15.8   3.7   49  123-176    47-98  (291)
156 2inf_A URO-D, UPD, uroporphyri  37.8      21 0.00086   15.8   5.6   74  108-182   129-219 (359)
157 3lk7_A UDP-N-acetylmuramoylala  37.7      13 0.00055   17.1   1.9   32  236-268   399-430 (451)
158 1b73_A Glutamate racemase; iso  37.5      21 0.00087   15.8  12.6  136  113-259    15-176 (254)
159 1s8n_A Putative antiterminator  37.0      21 0.00089   15.7   5.2   21  112-133    49-69  (205)
160 3gr7_A NADPH dehydrogenase; fl  37.0      21 0.00089   15.7   6.4   43  241-283   230-283 (340)
161 3fs2_A 2-dehydro-3-deoxyphosph  36.5      21  0.0009   15.7   6.1  142   42-207    40-195 (298)
162 3bh4_A Alpha-amylase; calcium,  36.4      22 0.00091   15.6   6.1   64   67-132    20-101 (483)
163 2qq6_A Mandelate racemase/muco  36.0      22 0.00092   15.6   5.9   72   64-137   147-223 (410)
164 2nv1_A Pyridoxal biosynthesis   35.6      20 0.00083   15.9   2.5   38  224-261   116-153 (305)
165 2qgy_A Enolase from the enviro  35.5      22 0.00093   15.6   5.7   64   59-136   142-206 (391)
166 1v93_A 5,10-methylenetetrahydr  35.5      22 0.00093   15.5   9.7  142   53-211    72-218 (296)
167 2ze0_A Alpha-glucosidase; TIM   35.2      23 0.00095   15.5   5.7  105   66-174    29-197 (555)
168 3jr2_A Hexulose-6-phosphate sy  35.1      23 0.00095   15.5   5.9   96   64-196    15-111 (218)
169 3obe_A Sugar phosphate isomera  35.0      23 0.00095   15.5   5.8  102   61-174    24-132 (305)
170 3faw_A Reticulocyte binding pr  34.7      23 0.00096   15.5   6.2  154   40-194   269-478 (877)
171 1zh2_A KDP operon transcriptio  34.6      23 0.00096   15.5   3.5   57  231-290    25-85  (121)
172 2ovl_A Putative racemase; stru  34.0      23 0.00099   15.4   5.8   62   60-135   140-202 (371)
173 3no1_A Isomerase, mandelate ra  33.6      24   0.001   15.4   3.8   65   61-139   161-226 (398)
174 3jte_A Response regulator rece  33.6      24   0.001   15.3   6.7   71  231-302    27-102 (143)
175 3kru_A NADH:flavin oxidoreduct  33.4      24   0.001   15.3  11.8   43  240-282   229-282 (343)
176 2e55_A Uracil phosphoribosyltr  33.3      24   0.001   15.3   5.2   51   67-135   134-184 (208)
177 2ox4_A Putative mandelate race  33.2      24   0.001   15.3   8.4   65   65-129   145-215 (403)
178 3gka_A N-ethylmaleimide reduct  32.6      25   0.001   15.2  12.6   54   70-123   163-227 (361)
179 1y0e_A Putative N-acetylmannos  32.4      25   0.001   15.2   9.4   77  235-334   125-217 (223)
180 3hv2_A Response regulator/HD d  32.2      25  0.0011   15.2   3.4   68  230-300    37-109 (153)
181 1eh9_A Glycosyltrehalose treha  31.8      25  0.0011   15.2  14.2  171   66-243   117-336 (558)
182 2ps2_A Putative mandelate race  31.8      18 0.00077   16.1   1.9   68   49-129   129-196 (371)
183 2ehj_A Uracil phosphoribosyltr  31.6      26  0.0011   15.1   5.8   49   68-134   137-185 (208)
184 1icp_A OPR1, 12-oxophytodienoa  31.4      26  0.0011   15.1  12.4  170   67-277   166-348 (376)
185 2pp0_A L-talarate/galactarate   31.3      26  0.0011   15.1   5.9   67   56-136   165-232 (398)
186 2guy_A Alpha-amylase A; (beta-  31.3      26  0.0011   15.1   6.7  151   40-191    10-224 (478)
187 3nvt_A 3-deoxy-D-arabino-heptu  30.9      26  0.0011   15.1   7.8   62   64-131   152-214 (385)
188 3n4f_A Mandelate racemase/muco  30.8      24   0.001   15.3   2.3   68   65-138   147-215 (392)
189 1ypf_A GMP reductase; GUAC, pu  30.6      27  0.0011   15.0   8.3   53   34-86     39-99  (336)
190 2o55_A Putative glycerophospho  30.6      27  0.0011   15.0  10.7  132  178-336   123-255 (258)
191 2yzr_A Pyridoxal biosynthesis   30.5      26  0.0011   15.0   2.5   36  225-260   113-148 (330)
192 3go2_A Putative L-alanine-DL-g  30.2      27  0.0011   15.0   7.8   74   59-137   136-226 (409)
193 1ydo_A HMG-COA lyase; TIM-barr  30.1      27  0.0011   15.0   6.8   27   60-87     21-47  (307)
194 1i3c_A Response regulator RCP1  29.7      27  0.0012   14.9   4.3   71  232-302    35-116 (149)
195 1ad1_A DHPS, dihydropteroate s  29.7      27  0.0012   14.9   2.8  206   65-333    23-248 (266)
196 2e1d_A Transaldolase; pentose   29.7      28  0.0012   14.9   4.7  147  102-276   108-264 (331)
197 3a5y_A GENX, putative lysyl-tR  29.5      28  0.0012   14.9   2.5   15   75-89    102-116 (345)
198 3dzd_A Transcriptional regulat  29.4      18 0.00076   16.2   1.5   14  113-126    62-75  (368)
199 3ju2_A Uncharacterized protein  29.4      14  0.0006   16.8   1.0   20   70-89     21-40  (284)
200 2eja_A URO-D, UPD, uroporphyri  29.2      28  0.0012   14.9   6.9  180  106-324   113-311 (338)
201 3cu5_A Two component transcrip  29.1      28  0.0012   14.9   2.7   63  237-302    36-102 (141)
202 2rdx_A Mandelate racemase/muco  28.8      28  0.0012   14.8   3.3   75   42-130   121-196 (379)
203 2pmq_A Mandelate racemase/muco  28.8      29  0.0012   14.8   3.6   33  252-284   259-295 (377)
204 1eye_A DHPS 1, dihydropteroate  28.6      29  0.0012   14.8   2.8  213   65-334    26-264 (280)
205 2zbt_A Pyridoxal biosynthesis   28.6      29  0.0012   14.8   2.5   38  224-261   116-153 (297)
206 3aj7_A Oligo-1,6-glucosidase;   28.2      29  0.0012   14.8   5.8   64   66-133    38-111 (589)
207 2zad_A Muconate cycloisomerase  27.9      29  0.0012   14.7   4.2   65   53-131   126-190 (345)
208 3my9_A Muconate cycloisomerase  27.9      30  0.0012   14.7   4.1   81   42-136   122-203 (377)
209 1mxg_A Alpha amylase; hyperthe  27.8      30  0.0012   14.7   6.0   26   67-92     27-52  (435)
210 1twd_A Copper homeostasis prot  27.8      30  0.0012   14.7   6.2  126   42-197    52-194 (256)
211 2hqr_A Putative transcriptiona  27.6      30  0.0013   14.7   5.9   24  169-192   174-197 (223)
212 1xp3_A Endonuclease IV; NFO, D  27.1      30  0.0013   14.6   5.7   58   25-90     62-122 (307)
213 2pcq_A Putative dihidrodipicol  27.1      30  0.0013   14.6   6.1   34   56-89     63-96  (283)
214 1hvx_A Alpha-amylase; hydrolas  26.7      31  0.0013   14.6   6.4   66   66-132    22-104 (515)
215 3cq0_A Putative transaldolase   26.6      31  0.0013   14.6   3.4   68  102-175   113-190 (339)
216 1qwg_A PSL synthase;, (2R)-pho  26.2      32  0.0013   14.5   6.0  164   65-283    23-204 (251)
217 3edf_A FSPCMD, cyclomaltodextr  26.1      32  0.0013   14.5  11.0  156   35-193   103-331 (601)
218 1j0h_A Neopullulanase; beta-al  25.8      32  0.0014   14.5   9.6  150   66-221   174-385 (588)
219 3fem_A Pyridoxine biosynthesis  25.7      32  0.0014   14.5   3.0   49  225-273   113-161 (297)
220 3cyj_A Mandelate racemase/muco  25.6      32  0.0014   14.4   7.0   80   32-131   116-196 (372)
221 3lg3_A Isocitrate lyase; conse  25.5      33  0.0014   14.4   5.2  193   74-291    78-325 (435)
222 1k66_A Phytochrome response re  25.4      33  0.0014   14.4   2.4   66  236-301    38-116 (149)
223 3m16_A Transaldolase; dimer, m  25.2      33  0.0014   14.4   4.4   69  102-175   109-185 (329)
224 2pz0_A Glycerophosphoryl diest  25.1      33  0.0014   14.4   6.3  124  176-336   124-250 (252)
225 2vu1_A Acetyl-COA acetyltransf  25.0      14  0.0006   16.8   0.3   58  136-196   241-306 (392)
226 2w1v_A Nitrilase-2, nitrilase   24.9      33  0.0014   14.4   4.4   59  111-176    25-84  (276)
227 2wmm_A Chromosome partition pr  24.9      20 0.00086   15.8   1.1   44  174-219    23-70  (162)
228 3hht_A NitrIle hydratase alpha  24.7      22  0.0009   15.6   1.2   78  182-260    28-105 (216)
229 1hx0_A Alpha amylase (PPA); in  24.6      34  0.0014   14.3   6.6   71   62-134    16-101 (496)
230 3agp_A Elongation factor TS, e  24.4      22 0.00093   15.6   1.2   16   73-88    403-418 (1289)
231 1m3u_A 3-methyl-2-oxobutanoate  24.4      34  0.0014   14.3  12.6  131  113-253   122-254 (264)
232 3a8g_A NitrIle hydratase subun  24.3      19 0.00079   16.0   0.8   81  179-260    19-99  (207)
233 3m07_A Putative alpha amylase;  24.3      34  0.0014   14.3   5.3  112   66-181   152-293 (618)
234 3h5i_A Response regulator/sens  23.7      24   0.001   15.3   1.2   26  262-287    63-88  (140)
235 1v9s_A Uracil phosphoribosyltr  23.7      35  0.0015   14.2   5.0   49   68-134   137-185 (208)
236 2dh2_A 4F2 cell-surface antige  23.7      35  0.0015   14.2  11.5  120   66-194    34-165 (424)
237 3i6e_A Muconate cycloisomerase  23.5      35  0.0015   14.2   3.8   48  252-299   265-320 (385)
238 1ugp_A NitrIle hydratase alpha  23.3      15 0.00061   16.8   0.1   73  182-260    19-96  (203)
239 1me8_A Inosine-5'-monophosphat  23.1      36  0.0015   14.1   6.1   13  161-173   297-309 (503)
240 3l12_A Putative glycerophospho  23.0      36  0.0015   14.1   7.7   65  251-336   243-307 (313)
241 3hzh_A Chemotaxis response reg  22.9      36  0.0015   14.1   6.8   71  231-302    60-136 (157)
242 2qr3_A Two-component system re  22.9      36  0.0015   14.1   6.6   71  230-302    26-105 (140)
243 2wq7_A RE11660P; lyase-DNA com  22.8      36  0.0015   14.1   5.4   73   15-88     36-109 (543)
244 2bhu_A Maltooligosyltrehalose   22.7      37  0.0015   14.1  11.8  123   66-195   142-301 (602)
245 1bd3_D Uprtase, uracil phospho  22.6      37  0.0015   14.1   4.8   52  111-166    22-73  (243)
246 2cbn_A Ribonuclease Z; phospho  22.6      37  0.0015   14.1   4.2   52  247-326   220-271 (306)
247 1dbw_A Transcriptional regulat  21.9      38  0.0016   14.0   4.4   69  231-302    27-100 (126)
248 2bdq_A Copper homeostasis prot  21.3      39  0.0016   13.9   4.7   33   59-92     64-99  (224)
249 3o6c_A PNP synthase, pyridoxin  21.3      39  0.0016   13.9   3.0  143  160-316   115-260 (260)
250 3bjs_A Mandelate racemase/muco  21.2      39  0.0017   13.9   6.6   63   60-137   179-242 (428)
251 1w0m_A TIM, triosephosphate is  21.1      39  0.0017   13.9   6.0   21   68-89     22-43  (226)
252 2og9_A Mandelate racemase/muco  20.9      40  0.0017   13.8   6.7   38  251-289   279-320 (393)
253 1xrs_A D-lysine 5,6-aminomutas  20.8      40  0.0017   13.8   3.1   70  143-220   156-249 (516)
254 3dmp_A Uracil phosphoribosyltr  20.8      40  0.0017   13.8   5.0   54   68-139   143-199 (217)
255 2aaa_A Alpha-amylase; glycosid  20.6      40  0.0017   13.8   5.3  123   66-190    41-223 (484)
256 3icg_A Endoglucanase D; cellul  20.5      40  0.0017   13.8   8.9   85   73-167    50-136 (515)
257 3iwp_A Copper homeostasis prot  20.5      41  0.0017   13.8   9.0  139   24-197    79-234 (287)
258 1tmy_A CHEY protein, TMY; chem  20.4      41  0.0017   13.8   7.3   68  232-302    27-100 (120)
259 1bwv_A Rubisco, protein (ribul  20.4      41  0.0017   13.8   9.4  192  104-324   117-336 (493)
260 2ftp_A Hydroxymethylglutaryl-C  20.0      41  0.0017   13.7   7.1   96   71-180    86-183 (302)
261 2isw_A Putative fructose-1,6-b  20.0      41  0.0017   13.7   4.3   27   62-88     23-49  (323)

No 1  
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=100.00  E-value=0  Score=1117.13  Aligned_cols=328  Identities=47%  Similarity=0.830  Sum_probs=322.3

Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             55788858563128988999863477888773311666758988110488878632889999999999998889367633
Q gi|255764463|r    9 HKICCHRRMRRNRKSNWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIF   88 (337)
Q Consensus         9 ~~~~p~~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LF   88 (337)
                      ++.||++||||||+|+|+|+||+||+|+++|||||+||+||.+.++||+||||+||||+|.|++++++++++||++|+||
T Consensus         7 ~~~fP~~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PiFV~Eg~~~kepI~SMPGv~R~Sid~L~~eie~~~~lGI~aV~LF   86 (337)
T 1w5q_A            7 NRAYPYTRLRRNRRDDFSRRLVRENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALF   86 (337)
T ss_dssp             CCCTTTCCTTTTTSSHHHHHHHCCCCCCGGGEEEEEEEESSSSCEEECTTSTTCEEEEHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCEEEEEEEECCCCCEECCCCCCCEEECHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             78899877665689878999984378888996620599408998335689998436689999999999998799789980


Q ss_pred             ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             025633455445421576537999999999730144798613327100114310013-6544628999999999999996
Q gi|255764463|r   89 PNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILC-DGEIVNDETIELISHAAVIQAD  167 (337)
Q Consensus        89 p~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~-~g~IdND~Tl~~L~k~Al~~A~  167 (337)
                      |++++++||+.|++|||+||++|||||.||+.||||+|||||||||||+||||||++ +|.||||+|+++|+|||++||+
T Consensus        87 gvi~~~~Kd~~gs~A~n~~~lv~raIr~iK~~fp~l~vi~DVcLc~YT~hGHcGil~~~g~idND~Tl~~L~~~Al~~A~  166 (337)
T 1w5q_A           87 PVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVCLCEFTTHGQCGILDDDGYVLNDVSIDVLVRQALSHAE  166 (337)
T ss_dssp             ECCCGGGCBSSCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBTTCCSSCBCTTSCBCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             41146667888501069632899999999986064699975203567786776622688866568999999999999998


Q ss_pred             CCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCC-CCCCCCCCCCCCHHHHHHHHH
Q ss_conf             2897352466767799999999987788577300336664354301016753102446-777744315721147889888
Q gi|255764463|r  168 AGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLL-KGDKKTYYLDPANVQEAIREA  246 (337)
Q Consensus       168 AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~-~gdr~sYQmd~~n~~eA~~e~  246 (337)
                      ||||+|||||||||||++||++||++||++|+|||||+||||+||||||||++|+|+| +|||+||||||+|++||++|+
T Consensus       167 AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImSYsaKfaS~fYGPFRdA~~S~p~~~~gdr~~YQmd~~n~~eAl~e~  246 (337)
T 1w5q_A          167 AGAQVVAPSDMMDGRIGAIREALESAGHTNVRVMAYSAKYASAYYGPFRDAVGSASNLGKGNRATYQMDPANSDEALHEV  246 (337)
T ss_dssp             TTCSEEEECSCCTTHHHHHHHHHHHTTCTTCEEEEEEEEBCCGGGHHHHHC----------CGGGTSBCTTCSHHHHHHH
T ss_pred             HCCCEECCHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHH
T ss_conf             17980441311466899999999976997762012356664631135788742765557888226636998989999999


Q ss_pred             HHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECH
Q ss_conf             87664089879955311458999999962499899993461899999999888978899999999999772699998201
Q gi|255764463|r  247 SIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYF  326 (337)
Q Consensus       247 ~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~  326 (337)
                      .+|++||||||||||||||||||+++|++|++|++||||||||||||+|+++||+|+ ++++|+|++|||||||+|||||
T Consensus       247 ~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~Pv~aYqVSGEYamik~a~~~g~~~~-~~~~E~l~~~kRAGAd~IitY~  325 (337)
T 1w5q_A          247 AADLAEGADMVMVKPGMPYLDIVRRVKDEFRAPTFVYQVSGEYAMHMGAIQNGWLAE-SVILESLTAFKRAGADGILTYF  325 (337)
T ss_dssp             HHHHHTTCSEEEEESCGGGHHHHHHHHHHHCSCEEEEECHHHHHHHHHHHHTTSSCT-THHHHHHHHHHHHTCSEEEETT
T ss_pred             HHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCH-HHHHHHHHHHHHCCCCEEEECC
T ss_conf             851753987799626515899999999726998799976199999999998699507-5999999999865998998700


Q ss_pred             HHHHHHHHHCC
Q ss_conf             89999998509
Q gi|255764463|r  327 AMEAARILTHS  337 (337)
Q Consensus       327 A~~~a~~L~~~  337 (337)
                      |+++|+||++.
T Consensus       326 A~~~a~~L~~~  336 (337)
T 1w5q_A          326 AKQAAEQLRRG  336 (337)
T ss_dssp             HHHHHHHHHC-
T ss_pred             HHHHHHHHHCC
T ss_conf             99999998567


No 2  
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=100.00  E-value=0  Score=1103.96  Aligned_cols=327  Identities=44%  Similarity=0.745  Sum_probs=319.7

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             57888585631289889998634778887733116667589881104888786328899999999999988893676330
Q gi|255764463|r   10 KICCHRRMRRNRKSNWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFP   89 (337)
Q Consensus        10 ~~~p~~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp   89 (337)
                      .+..++||||||+++++|+||+||+|+++|||||+||+|+ +.++||+||||+||||+|.|++++++++++||++|+|||
T Consensus        20 ~l~~~~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PlFV~e~-~~~~~I~sMPGi~R~Sid~L~~ei~~~~~lGI~avlLFp   98 (360)
T 3obk_A           20 WLPIQARPRRNRKNRAVRQLVQENLVKPSSLIYPLFVHDE-ETSVPIPSMPGQSRLSMEDLLKEVGEARSYGIKAFMLFP   98 (360)
T ss_dssp             ECCCSCCGGGGGSSHHHHHHHCCCCCCGGGEEEEEEEESS-SSCEECTTSTTCEEECHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCEEEEEEECC-CCEEECCCCCCCCEECHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             4564556774679878999985279888997632399569-843445899985356899999999999988998899607


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             25633455445421576537999999999730144798613327100114310013--6544628999999999999996
Q gi|255764463|r   90 NIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILC--DGEIVNDETIELISHAAVIQAD  167 (337)
Q Consensus        90 ~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~--~g~IdND~Tl~~L~k~Al~~A~  167 (337)
                      ++++++||+.|++|||+||++|||||+||++||||+|||||||||||+||||||++  +|+||||+|+++|+|||++||+
T Consensus        99 vi~~~~Kd~~Gs~A~n~~glv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGil~~~~g~IdND~Tl~~L~k~Als~A~  178 (360)
T 3obk_A           99 KVDDELKSVMAEESYNPDGLLPRAIMALKEAFPDVLLLADVALDPYSSMGHDGVVDEQSGKIVNDLTVHQLCKQAITLAR  178 (360)
T ss_dssp             ECCGGGCBSSCGGGGCTTSHHHHHHHHHHHHSTTCEEEEEECSGGGBTTCCSSCBCTTTCCBCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             76556799886724581168999999999865530200220026665888653124655824719899999999999998


Q ss_pred             CCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             28973524667677999999999877885773003366643543010167531024467777443157211478898888
Q gi|255764463|r  168 AGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREAS  247 (337)
Q Consensus       168 AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~  247 (337)
                      ||||+|||||||||||++||++||++||.+|+|||||+||||+||||||||++|+|.|.+||+||||||+|++||+||+.
T Consensus       179 AGADiVAPSDMMDGrV~aIR~aLd~~g~~~v~ImSYsaKfaS~fYGPFRdA~~S~p~~g~drksYQmd~~n~~eA~re~~  258 (360)
T 3obk_A          179 AGADMVCPSDMMDGRVSAIRESLDMEGCTDTSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPSNSREAEREAE  258 (360)
T ss_dssp             HTCSEEEECSCCTTHHHHHHHHHHHTTCTTSEEEEEEEEBCCSTTHHHHHHHTCCCSTTCCSTTTSBCTTCSHHHHHHHH
T ss_pred             HCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCHHHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHH
T ss_conf             47982563301463999999999977998860542034552422345789851665568887411349888899999999


Q ss_pred             HHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHH
Q ss_conf             76640898799553114589999999624998999934618999999998889788999999999997726999982018
Q gi|255764463|r  248 IDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFA  327 (337)
Q Consensus       248 ~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A  327 (337)
                      +|++||||||||||||||||||+++|+++++|++||||||||||||+|+++||+|++++++|+|++|||||||+||||||
T Consensus       259 ~D~~EGAD~lMVKPal~yLDii~~~k~~~~~Pv~aYqVSGEYamikaaa~~g~~d~~~~~~E~l~~~kRAGAd~IiTY~A  338 (360)
T 3obk_A          259 ADASEGADMLMVKPGLPYLDVLAKIREKSKLPMVAYHVSGEYAMLKAAAEKGYISEKDTVLEVLKSFRRAGADAVATYYA  338 (360)
T ss_dssp             HHHHTTCSEEEEESSGGGHHHHHHHHHHCSSCEEEEECHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTCSEEEETTH
T ss_pred             HHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEHHH
T ss_conf             87864987799626516899999999854998799973469999999998699757889999999998639989976009


Q ss_pred             HHHHHHHHCC
Q ss_conf             9999998509
Q gi|255764463|r  328 MEAARILTHS  337 (337)
Q Consensus       328 ~~~a~~L~~~  337 (337)
                      +|+|+||+|.
T Consensus       339 ~~~a~~L~~~  348 (360)
T 3obk_A          339 KEAAKWMVED  348 (360)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
T ss_conf             9999998863


No 3  
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynthesis, heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=100.00  E-value=0  Score=1104.17  Aligned_cols=323  Identities=49%  Similarity=0.860  Sum_probs=316.6

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             57888585631289889998634778887733116667589881104888786328899999999999988893676330
Q gi|255764463|r   10 KICCHRRMRRNRKSNWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFP   89 (337)
Q Consensus        10 ~~~p~~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp   89 (337)
                      .+.+.+||||||+|+|+|+||+||+|+++|||||+||+||.+.++||+||||++|||+|.|++++++++++||++|+|||
T Consensus         6 ~~~~~~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~~~~I~SMPGi~R~SiD~L~~~ie~~~~lGI~av~LFp   85 (328)
T 1w1z_A            6 LLNIVHRPRRLRRTAALRNLVQENTLTVNDLVFPLFVMPGTNAVEEVSSMPGSFRFTIDRAVEECKELYDLGIQGIDLFG   85 (328)
T ss_dssp             ----CCCGGGGTSSHHHHHHHCCCCCCGGGEEEEEEEESSSSCEEEETTEEEEEEEEHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCEEEEEEEECCCCCEECCCCCCCEEECHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             36435567646798799999870798889966206995289972356899983466799999999999986998899972


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf             25633455445421576537999999999730144798613327100114310013654462899999999999999628
Q gi|255764463|r   90 NIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAG  169 (337)
Q Consensus        90 ~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AG  169 (337)
                      ++  ++||+.|++|||+||++|||||.||++||||+|||||||||||+||||||+++|+||||+|++.|+|||++||+||
T Consensus        86 v~--~~K~~~gs~A~n~d~lv~rAIr~iK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~idND~Tl~~L~k~Al~~A~AG  163 (328)
T 1w1z_A           86 IP--EQKTEDGSEAYNDNGILQQAIRAIKKAVPELCIMTDVALDPFTPFGHDGLVKDGIILNDETVEVLQKMAVSHAEAG  163 (328)
T ss_dssp             CC--SSCCSSCGGGGCTTSHHHHHHHHHHHHSTTSEEEEEECSTTTSTTSCSSEESSSCEEHHHHHHHHHHHHHHHHHHT
T ss_pred             CC--CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf             45--5556785202697537999999998548985898622015676888715478997856999999999999999817


Q ss_pred             CCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             97352466767799999999987788577300336664354301016753102446777744315721147889888876
Q gi|255764463|r  170 ADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASID  249 (337)
Q Consensus       170 aDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D  249 (337)
                      ||+|||||||||||++||++||++||++|+|||||+||||+||||||||++|+|+| |||+||||||+|++||+||+++|
T Consensus       164 aDiVAPSdMMDGrV~aIR~~Ld~~g~~~~~ImSYsaK~aS~fYgPFRdA~~S~p~~-gdr~sYQmd~~n~~eA~~e~~~D  242 (328)
T 1w1z_A          164 ADFVSPSDMMDGRIGAIREALDETDHSDVGILSYAAKYASSFYGPFRDALHSAPQF-GDKSTYQMNPANTEEAMKEVELD  242 (328)
T ss_dssp             CSEEEECSCCTTHHHHHHHHHHHTTCTTSEEEEEEEEBCCTTCHHHHHHTTCCCCC-SCSTTTSBCTTCSHHHHHHHHHH
T ss_pred             CCCCCCHHCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHC-CCCCEEECCCCCHHHHHHHHHHH
T ss_conf             98145131145589999999997798666122134555342023488986314304-88651007999879999986332


Q ss_pred             HHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHH
Q ss_conf             64089879955311458999999962499899993461899999999888978899999999999772699998201899
Q gi|255764463|r  250 IQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAME  329 (337)
Q Consensus       250 ~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~  329 (337)
                      ++|||||||||||+||||||+++|++|++|++||||||||||||+|+++||+|++++++|+|++|||||||+||||||+|
T Consensus       243 ~~EGAD~lmVKPa~~yLDii~~~k~~~~~Pv~aYqVSGEYamik~aa~~G~~d~~~~~~Esl~~~kRAGAd~IitY~A~~  322 (328)
T 1w1z_A          243 IVEGADIVMVKPGLAYLDIVWRTKERFDVPVAIYHVSGEYAMVKAAAAKGWIDEDRVMMESLLCMKRAGADIIFTYYAKE  322 (328)
T ss_dssp             HHHTCSEEEEESCGGGHHHHHHHHHHHCSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTCSEEEETTHHH
T ss_pred             HHCCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHH
T ss_conf             44298779851761388999999984599879997346999999999869975888999999999971999997601999


Q ss_pred             HHHHHH
Q ss_conf             999985
Q gi|255764463|r  330 AARILT  335 (337)
Q Consensus       330 ~a~~L~  335 (337)
                      +|+||+
T Consensus       323 ~a~~Lk  328 (328)
T 1w1z_A          323 AAKKLR  328 (328)
T ss_dssp             HHHHHC
T ss_pred             HHHHHC
T ss_conf             998629


No 4  
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=100.00  E-value=0  Score=1084.78  Aligned_cols=318  Identities=43%  Similarity=0.685  Sum_probs=311.6

Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf             88585631289889998634778887733116667589881104888786328899999999999988893676330256
Q gi|255764463|r   13 CHRRMRRNRKSNWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIP   92 (337)
Q Consensus        13 p~~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~   92 (337)
                      ..+||||||+|+|+|+||+||+|+++|||||+||+||.+.++||+||||+||||+|.|++++++++++||++|+|||+ |
T Consensus         3 ~~~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PlFV~eg~~~~e~I~SMPGi~R~Sid~l~~~i~~~~~lGI~av~LFpv-~   81 (323)
T 1l6s_A            3 LIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGI-S   81 (323)
T ss_dssp             CSCCGGGGGSSHHHHHHHCCCCCCGGGEEEEEEEETTCSSCEECTTSTTCEEEEGGGHHHHHHHHHHHTCCEEEEEEE-C
T ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCHHHCEEEEEEEECCCCCEECCCCCCCEEECHHHHHHHHHHHHHCCCCCEEEECC-C
T ss_conf             141666358987999998607988899553149921899833468999966758999999999999779760454354-6


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf             33455445421576537999999999730144798613327100114310013654462899999999999999628973
Q gi|255764463|r   93 MDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADI  172 (337)
Q Consensus        93 ~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDi  172 (337)
                       ++||+.|++|||+||++|||||.||+.||||+|||||||||||+||||||++++.||||+|+++|+||||+||+||||+
T Consensus        82 -~~Kd~~GseA~n~~glv~rair~iK~~~pdl~vi~DVcLc~YT~hGHcGil~~~~idND~Tl~~L~k~Al~~A~AGaDi  160 (323)
T 1l6s_A           82 -HHTDETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGADF  160 (323)
T ss_dssp             -SSCBSSCGGGGSTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBSSCCSSCBCSSSBCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred             -CCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf             -7789974241498658999999998408977387414326676888741201677575899999999999999817981


Q ss_pred             EECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             52466767799999999987788577300336664354301016753102446777744315721147889888876640
Q gi|255764463|r  173 IAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQE  252 (337)
Q Consensus       173 vAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~E  252 (337)
                      |||||||||||++||++||++||++|+|||||+||||+||||||||++|+| + |||+||||||+|++||++|+.+|++|
T Consensus       161 VAPSdMMDGrV~aIR~~Ld~~g~~~~~ImSYsaKyaS~fYGPFRdA~~S~~-~-gdr~sYQmd~~n~~eA~~e~~~D~~E  238 (323)
T 1l6s_A          161 IAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSAL-K-GDRKSYQMNPMNRREAIRESLLDEAQ  238 (323)
T ss_dssp             EEECSCCTTHHHHHHHHHHHTTCTTCEEBCCCEEBCCSCCHHHHHHHTCCC-S-SCCTTTSBCTTCHHHHHHHHHHHHHT
T ss_pred             CCCHHCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCHHHHHHCCCC-C-CCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf             251310565999999999976986751321023434513452778844878-8-99852105877668999986031442


Q ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHH
Q ss_conf             89879955311458999999962499899993461899999999888978899999999999772699998201899999
Q gi|255764463|r  253 SADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAAR  332 (337)
Q Consensus       253 GAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~  332 (337)
                      |||||||||||||||||+++|++|++|++||||||||||||+|+++||+|++++++|+|++|||||||+||||||+|+|+
T Consensus       239 GAD~lmVKPa~~yLDii~~~k~~~~~Pv~aYqVSGEYamikaaa~~g~~d~~~~~~E~l~~~kRAGAd~IiTY~A~~~a~  318 (323)
T 1l6s_A          239 GADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAE  318 (323)
T ss_dssp             TCSBEEEESCTTCHHHHHHHHTTCSSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCSEEEETTHHHHHH
T ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHH
T ss_conf             98658840441378899999982699889997528999999999869975676999999999862999998707899999


Q ss_pred             --HH
Q ss_conf             --98
Q gi|255764463|r  333 --IL  334 (337)
Q Consensus       333 --~L  334 (337)
                        ||
T Consensus       319 ~~~~  322 (323)
T 1l6s_A          319 KKIL  322 (323)
T ss_dssp             TTSC
T ss_pred             HHHC
T ss_conf             8740


No 5  
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=100.00  E-value=0  Score=1068.73  Aligned_cols=328  Identities=32%  Similarity=0.521  Sum_probs=314.9

Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             55788858563128988999863477888773311666758988110488878632889999999999998889367633
Q gi|255764463|r    9 HKICCHRRMRRNRKSNWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIF   88 (337)
Q Consensus         9 ~~~~p~~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LF   88 (337)
                      .....++++|+.+.|+++|+||+||+|+++|||||+||+||.+.++||+||||++|||+|.|++++++++++||++|+||
T Consensus        10 ~~~~~~~~l~~~~~n~~lR~lv~Et~Ls~~dLI~PiFV~eg~~~~~~I~sMPGv~R~sid~L~~~i~~~~~lGI~av~LF   89 (342)
T 1h7n_A           10 EPTEISSVLAGGYNHPLLRQWQSERQLTKNMLIFPLFISDNPDDFTEIDSLPNINRIGVNRLKDYLKPLVAKGLRSVILF   89 (342)
T ss_dssp             CCCCGGGCCGGGSSSHHHHHHTCSSCCCGGGEEEEEEEESSTTCEEECTTSTTCEEECHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCHHHHHHCCCCCCHHHHHHHHCCCCCHHHCEEEEEEECCCCCCEECCCCCCCCEECHHHHHHHHHHHHHCCCCEEEEC
T ss_conf             86335687606899989999986089888996620398108998423799998633289999999999998699979967


Q ss_pred             EC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHH
Q ss_conf             02-56334554454215765379999999997301447986133271001143100136-54462899999999999999
Q gi|255764463|r   89 PN-IPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCD-GEIVNDETIELISHAAVIQA  166 (337)
Q Consensus        89 p~-I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~-g~IdND~Tl~~L~k~Al~~A  166 (337)
                      |+ +.+++||+.|++|||++|+||||||+||+.||||+|||||||||||+||||||+++ +.||||+|+++|+|||++||
T Consensus        90 gvp~~~~~Kd~~gseA~n~~~lv~rAIr~IK~~fpdl~vi~DVcLcpYT~hGHcGIl~~~~~idnd~Tl~~L~k~Al~~A  169 (342)
T 1h7n_A           90 GVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPELYIICDVCLCEYTSHGHCGVLYDDGTINRERSVSRLAAVAVNYA  169 (342)
T ss_dssp             EECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBTTCCSSCBCTTSSBCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             98887766898772321874589999999996589867985310155668787556358971041789999999999999


Q ss_pred             HCCCCEEECCCCCCCHHHHHHHHHHHCC-CCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             6289735246676779999999998778-857730033666435430101675310244677774431572114788988
Q gi|255764463|r  167 DAGADIIAPSEMMDGRVQEIRKKLDSHG-HINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIRE  245 (337)
Q Consensus       167 ~AGaDivAPSdMMDGrV~aIR~~Ld~~g-~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e  245 (337)
                      +||||||||||||||||++||++||+++ |.+|+|||||+||||+||||||||++|+|+| ||||||||||+|++||+||
T Consensus       170 ~AGaDiVAPSDMMDGrV~aIR~~Ld~~~~~~~~~ImSYsaKfaS~fYGPFRdA~~S~p~~-gdrktYQmd~~n~~eA~re  248 (342)
T 1h7n_A          170 KAGAHCVAPSDMIDGRIRDIKRGLINANLAHKTFVLSYAAKFSGNLYGPFRDAACSAPSN-GDRKCYQLPPAGRGLARRA  248 (342)
T ss_dssp             HHTCSEEEECCCCTTHHHHHHHHHHHTTCTTTCEEEEEEEEBCSSCCHHHHHHHTCCCSS-SCSTTTSBCTTCHHHHHHH
T ss_pred             HCCCCEECHHHCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCHHHHHHHCCCCC-CCCCEEECCCCCHHHHHHH
T ss_conf             728981432412678499999999973887740210288888876112589986220138-9864221799988999999


Q ss_pred             HHHHHHCCCCEEEECCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             8876640898799553114589999999624-998999934618999999998889788999999999997726999982
Q gi|255764463|r  246 ASIDIQESADMLLVKPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFT  324 (337)
Q Consensus       246 ~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~Iit  324 (337)
                      +++|++||||||||||||||||||+++|++| ++|++||||||||||||+|+++||+|++++++|+|++|||||||+|||
T Consensus       249 ~~~D~~EGAD~lMVKPa~~yLDiI~~~k~~~~~~Pv~aYqVSGEYamikaaa~~g~~d~~~~~~E~l~~~kRAGAd~IiT  328 (342)
T 1h7n_A          249 LERDMSEGADGIIVKPSTFYLDIMRDASEICKDLPICAYHVSGEYAMLHAAAEKGVVDLKTIAFESHQGFLRAGARLIIT  328 (342)
T ss_dssp             HHHHHHTTCSEEEEESSGGGHHHHHHHHHHTTTSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCSEEEE
T ss_pred             HHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             97537609987996177148899999997466998799974369999999998799758889999999998629989986


Q ss_pred             CHHHHHHHHHHCC
Q ss_conf             0189999998509
Q gi|255764463|r  325 YFAMEAARILTHS  337 (337)
Q Consensus       325 Y~A~~~a~~L~~~  337 (337)
                      |||+++|+||+|.
T Consensus       329 Y~A~~~a~~L~~~  341 (342)
T 1h7n_A          329 YLAPEFLDWLDEE  341 (342)
T ss_dssp             TTHHHHHHHTTC-
T ss_pred             CCHHHHHHHHHHC
T ss_conf             0299999987423


No 6  
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=100.00  E-value=0  Score=1069.99  Aligned_cols=324  Identities=35%  Similarity=0.603  Sum_probs=318.8

Q ss_pred             CCCCCCCCCCCCHHHHHH-HHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             888585631289889998-6347788877331166675898811048887863288999999999999888936763302
Q gi|255764463|r   12 CCHRRMRRNRKSNWIREM-VREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPN   90 (337)
Q Consensus        12 ~p~~R~RRlR~~~~iR~L-v~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~   90 (337)
                      .|++|+||.|.|+++|+| ++||+|+++||||||||+||++.++||+||||++|||+|.|++++++++++||++|+|||+
T Consensus         2 ~p~~~l~~~~~~~~~R~~~~~Et~Ls~sdLI~PiFV~eg~~~~e~I~SMPGv~r~sid~L~~~ie~~~~lGI~av~LF~v   81 (330)
T 1pv8_A            2 QPQSVLHSGYLHPLLRAWQTATTTLNASNLIYPIFVTDVPDDIQPITSLPGVARYGVKRLEEMLRPLVEEGLRCVLIFGV   81 (330)
T ss_dssp             ---------CCCHHHHHHHTTTTCCCGGGEEEEEEECSCTTCEEECSSSTTCEEECHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             CCCCHHHCCCCCHHHHHHHHHCCCCCHHHCEEEEEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             95313226678978874553137277899453049801899822458999975149999999999999889999999580


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf             56334554454215765379999999997301447986133271001143100136-54462899999999999999628
Q gi|255764463|r   91 IPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCD-GEIVNDETIELISHAAVIQADAG  169 (337)
Q Consensus        91 I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~-g~IdND~Tl~~L~k~Al~~A~AG  169 (337)
                      +++++||+.|++|||+||++|||||.||++|||++|||||||||||+||||||+++ |+||||+|+++|+|||++||+||
T Consensus        82 ~~~~~KD~~gs~A~~~~~lv~rAIr~iK~~fpdl~vi~DVcLc~YT~hGHcGil~~~~~idND~Tl~~L~k~Al~~A~AG  161 (330)
T 1pv8_A           82 PSRVPKDERGSAADSEESPAIEAIHLLRKTFPNLLVACDVCLCPYTSHGHCGLLSENGAFRAEESRQRLAEVALAYAKAG  161 (330)
T ss_dssp             C--------------CCSHHHHHHHHHHHHSTTSEEEEEECCC---------------CHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf             76303598775224722399999999996489808997504576768887461136310174889999999999999718


Q ss_pred             CCEEECCCCCCCHHHHHHHHHHHCCCCC-CCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             9735246676779999999998778857-730033666435430101675310244677774431572114788988887
Q gi|255764463|r  170 ADIIAPSEMMDGRVQEIRKKLDSHGHIN-VGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASI  248 (337)
Q Consensus       170 aDivAPSdMMDGrV~aIR~~Ld~~g~~~-~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~  248 (337)
                      ||+|||||||||||++||++||++||++ ++|||||+||||+||||||||++|+|+| ||||||||||+|++||+||+++
T Consensus       162 aDiVAPSdMMDGrV~aIR~aLd~~g~~~~v~ImSYsaKyaS~fYgPFRdA~~s~p~~-gdrk~YQmd~~n~~eAl~e~~~  240 (330)
T 1pv8_A          162 CQVVAPSDMMDGRVEAIKEALMAHGLGNRVSVMSYSAKFASCFYGPFRDAAKSSPAF-GDRRCYQLPPGARGLALRAVDR  240 (330)
T ss_dssp             CSEEEECC--CCHHHHHHHHHHHTTCTTTCEEBCCCEECCCGGGHHHHHCC--------------CCTTCHHHHHHHHHH
T ss_pred             CCEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCEEEECCCCCHHHHHHHHHH
T ss_conf             884511045678999999999977995530232166654056541468872467567-8841443598669999999998


Q ss_pred             HHHCCCCEEEECCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHH
Q ss_conf             6640898799553114589999999624-998999934618999999998889788999999999997726999982018
Q gi|255764463|r  249 DIQESADMLLVKPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFA  327 (337)
Q Consensus       249 D~~EGAD~lMVKPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A  327 (337)
                      |++||||||||||||||||||+++|++| ++|++||||||||||||+|+++||+|++++++|+|++|||||||+||||||
T Consensus       241 D~~EGAD~~mVKPa~~yLDii~~~k~~~~~~Pv~aYqVSGEYami~aaa~~g~~d~~~~~~E~l~~~kRAGAd~IiTY~A  320 (330)
T 1pv8_A          241 DVREGADMLMVKPGMPYLDIVREVKDKHPDLPLAVYHVSGEFAMLWHGAQAGAFDLKAAVLEAMTAFRRAGADIIITYYT  320 (330)
T ss_dssp             HHHTTCSBEEEESCGGGHHHHHHHHHHSTTSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTCSEEEETTH
T ss_pred             HHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEHHH
T ss_conf             87569877996264078999999997478998799976089999999998799857779999999998639989987019


Q ss_pred             HHHHHHHHC
Q ss_conf             999999850
Q gi|255764463|r  328 MEAARILTH  336 (337)
Q Consensus       328 ~~~a~~L~~  336 (337)
                      +++|+||+|
T Consensus       321 ~~~a~~L~~  329 (330)
T 1pv8_A          321 PQLLQWLKE  329 (330)
T ss_dssp             HHHHHHTTT
T ss_pred             HHHHHHHHC
T ss_conf             999998732


No 7  
>1ykw_A Rubisco-like protein; beta-alpha-barrel, unknown function; 2.00A {Chlorobaculum tepidum} SCOP: c.1.14.1 d.58.9.1 PDB: 1tel_A
Probab=96.65  E-value=0.012  Score=37.63  Aligned_cols=158  Identities=15%  Similarity=0.177  Sum_probs=105.8

Q ss_pred             HHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHCCCCEEE--------CCCCCC
Q ss_conf             999999997301447986133271001143100136--5446289999999999999962897352--------466767
Q gi|255764463|r  111 NEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCD--GEIVNDETIELISHAAVIQADAGADIIA--------PSEMMD  180 (337)
Q Consensus       111 ~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~--g~IdND~Tl~~L~k~Al~~A~AGaDivA--------PSdMMD  180 (337)
                      ...+|++-..+.--++.+              |++-  |     -|-+.|++++..++..|+|+|-        |-.=+.
T Consensus       152 i~G~R~~lgv~~RPL~~~--------------iiKPk~G-----Lsp~~~a~~~~~~~~GGvDfIKDDE~l~~~~~~p~~  212 (435)
T 1ykw_A          152 IEGLRDILNAHGRPIFFG--------------VVKPNIG-----LSPGEFAEIAYQSWLGGLDIAKDDEMLADVTWSSIE  212 (435)
T ss_dssp             HHHHHHHHTCCSSCEEEE--------------ECSSCSS-----CCHHHHHHHHHHHHHTTCSEEECCTTCSSBTTBCHH
T ss_pred             HHHHHHHHCCCCCCEECC--------------CCCCCCC-----CCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCHH
T ss_conf             588999848899831314--------------6788767-----887898999999983487700376445797757599


Q ss_pred             CHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHCCCCEEEE
Q ss_conf             79999999998778857730033666435430101675310244677774431572114-78898888766408987995
Q gi|255764463|r  181 GRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANV-QEAIREASIDIQESADMLLV  259 (337)
Q Consensus       181 GrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~-~eA~~e~~~D~~EGAD~lMV  259 (337)
                      -||.++.+++++.                             ..-.|.++-|-.+.... .|-++.+..=.+.|++.+||
T Consensus       213 eRv~~~~~a~~~a-----------------------------~~~TG~~~lya~NiT~~~~em~~ra~~~~~~G~~~vmv  263 (435)
T 1ykw_A          213 ERAAHLGKARRKA-----------------------------EAETGEPKIYLANITDEVDSLMEKHDVAVRNGANALLI  263 (435)
T ss_dssp             HHHHHHHHHHHHH-----------------------------HHHHSSCCEEEEECCCCGGGHHHHHHHHHHHTCCEEEE
T ss_pred             HHHHHHHHHHHHH-----------------------------HHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf             9999999999999-----------------------------99759755897215799999999999999819978999


Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEE-EECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             53114589999999624998999-934618999999998889788999999999997726999982
Q gi|255764463|r  260 KPGLPYLDVCFRIKEKFGLPTFA-YQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFT  324 (337)
Q Consensus       260 KPa~~yLDii~~~k~~~~~P~~a-YqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~Iit  324 (337)
                      -|...=++.++.+++.+++|+.+ ++.+|-|+   -....|+ +..  ++  -.-.+-||||.|++
T Consensus       264 ~~~~~G~~a~~~l~~~~~lpi~aH~a~~g~~~---r~~~~Gi-s~~--vl--~kL~RLaGaD~i~~  321 (435)
T 1ykw_A          264 NALPVGLSAVRMLSNYTQVPLIGHFPFIASFS---RMEKYGI-HSK--VM--TKLQRLAGLDAVIM  321 (435)
T ss_dssp             EHHHHCHHHHHHHHHHCSSCEEEECTTTHHHH---CSTTSEE-CHH--HH--HHHHHHHTCSEEEE
T ss_pred             ECCCCCHHHHHHHHHHCCCCHHCCCCCCCCCC---CCCCCCC-CHH--HH--HHHHHHCCCCCCCC
T ss_conf             46754279999998743741101313224434---6767852-599--99--99999829780345


No 8  
>2qyg_A Ribulose bisphosphate carboxylase-like protein 2; beta-alpha-barrel, unknown function; 3.30A {Rhodopseudomonas palustris CGA009}
Probab=96.25  E-value=0.057  Score=33.09  Aligned_cols=160  Identities=14%  Similarity=0.125  Sum_probs=100.3

Q ss_pred             HHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC--------CCCH
Q ss_conf             99999999730144798613327100114310013654462899999999999999628973524667--------6779
Q gi|255764463|r  111 NEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEM--------MDGR  182 (337)
Q Consensus       111 ~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdM--------MDGr  182 (337)
                      ...+|++-..+.--++.+              |++-.   ---|-+.+++++-.++..|+|+|-=-.+        ++-|
T Consensus       172 I~G~R~~lgv~~RPL~gt--------------iiKPk---lGLsp~~~a~~~ye~~~GGvDfIKDDE~l~~q~f~p~~eR  234 (452)
T 2qyg_A          172 IAGVRERLQAFDRPIFFG--------------VIKPN---IGLPPQPFAELGYQSWTGGLDIAKDDEMLADVDWCPLAER  234 (452)
T ss_dssp             HHHHHHHHTCCSSCEEEE--------------ECSSC---TTCCSHHHHHHHHHHHHHTCSEEECCTTCCSCTTSCHHHH
T ss_pred             HHHHHHHHCCCCCCEECC--------------CCCCC---CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf             388999857899850236--------------77887---7799899999999998528980027856679787869999


Q ss_pred             HHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHCCCCEEEECC
Q ss_conf             99999999877885773003366643543010167531024467777443157211-47889888876640898799553
Q gi|255764463|r  183 VQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPAN-VQEAIREASIDIQESADMLLVKP  261 (337)
Q Consensus       183 V~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n-~~eA~~e~~~D~~EGAD~lMVKP  261 (337)
                      |.++-+++                             .-+-.-.|-++-|-.+... ..+-++....=++.|+..+||-|
T Consensus       235 v~~v~ea~-----------------------------~~a~~eTG~~~lya~NIT~~~~~m~~ra~~a~~~G~~avmv~~  285 (452)
T 2qyg_A          235 AALLGDAC-----------------------------RRASAETGVPKIYLANITDEVDRLTELHDVAVANGAGALLINA  285 (452)
T ss_dssp             HHHHHHHH-----------------------------HHHHHHHSSCCEEEEECCCCTTHHHHHHHHHHHTTCCEEEEEH
T ss_pred             HHHHHHHH-----------------------------HHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             99999999-----------------------------9999986887447402689999999999999983995899926


Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEE-CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             11458999999962499899993-4618999999998889788999999999997726999982
Q gi|255764463|r  262 GLPYLDVCFRIKEKFGLPTFAYQ-VSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFT  324 (337)
Q Consensus       262 a~~yLDii~~~k~~~~~P~~aYq-VSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~Iit  324 (337)
                      ...=++.++.+++.+++|+.+.- .+|-|.   -....|+ +..  ++  -.-.+-||||.|++
T Consensus       286 ~~~G~~a~~~lr~~~~lpi~aH~a~~ga~~---r~~~~Gi-s~~--vl--~KL~RLaGaD~i~~  341 (452)
T 2qyg_A          286 MPVGLSAVRMLRKHATVPLIAHFPFIAAFS---RLANYGI-HSR--VM--TRLQRLAGFDVVIM  341 (452)
T ss_dssp             HHHCHHHHHHHHTTCCSCEEEECTTHHHHH---SCTTSEE-CHH--HH--HHHHHHHTCSEEEE
T ss_pred             CCCCHHHHHHHHHCCCCCEEECCCCCCCCC---CCCCCCC-CHH--HH--HHHHHHCCCCEEEE
T ss_conf             653689999998628963676256651003---6888867-399--99--99999808895441


No 9  
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=95.92  E-value=0.11  Score=31.08  Aligned_cols=177  Identities=15%  Similarity=0.207  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHCCCCEEEEEEC-----------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHC
Q ss_conf             999999999888936763302-----------56334554454215765379999999997301-447986133271001
Q gi|255764463|r   70 AVEKIKQVADLGIPAIAIFPN-----------IPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTI  137 (337)
Q Consensus        70 L~~eie~~~~lGI~av~LFp~-----------I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~  137 (337)
                      ..+.++.+.+.|.-.|-|-..           ..+.-+|+.|-.--|.--++...|++||+.+| +..|..-...++|. 
T Consensus       160 f~~AA~~a~~AGfDgVEiH~ahGyLl~qFlSp~~N~RtDeYGGs~enR~Rf~~Eii~air~~~g~~~~i~~R~~~~~~~-  238 (363)
T 3l5l_A          160 FVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYD-  238 (363)
T ss_dssp             HHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSS-
T ss_pred             HHHHHHHHHHCCCCEEECCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC-
T ss_conf             9999999996296753213454313552767778998687888845606789999999998626677402105732357-


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCH--
Q ss_conf             143100136544628999999999999996289735246676779999999998778857730033666435430101--
Q gi|255764463|r  138 HGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPY--  215 (337)
Q Consensus       138 hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPF--  215 (337)
                                 ..+..|++...+.+..+.++|+|++--|.-.              ...+..+.     +...|+.||  
T Consensus       239 -----------~~~g~~~~e~~~~~~~l~~~gvD~i~vs~G~--------------~~~~~~~~-----~~~~~~~~~a~  288 (363)
T 3l5l_A          239 -----------GRDEQTLEESIELARRFKAGGLDLLSVSVGF--------------TIPDTNIP-----WGPAFMGPIAE  288 (363)
T ss_dssp             -----------SCHHHHHHHHHHHHHHHHHTTCCEEEEEECC--------------CSSCCCCC-----CCTTTTHHHHH
T ss_pred             -----------CCCCCCHHHHHHHHHHHHHHCCCEEEEECCC--------------CCCCCCCC-----CCCCCHHHHHH
T ss_conf             -----------8898648899999999986187679985473--------------22676666-----67420057999


Q ss_pred             --HHHHHCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCEEE-ECCCHHHHHHHHHHHHHCCCCEEEEECCHHH
Q ss_conf             --6753102446-7777443157211478898888766408-98799-5531145899999996249989999346189
Q gi|255764463|r  216 --RDAISTRDLL-KGDKKTYYLDPANVQEAIREASIDIQES-ADMLL-VKPGLPYLDVCFRIKEKFGLPTFAYQVSGEY  289 (337)
Q Consensus       216 --RdA~~S~p~~-~gdr~sYQmd~~n~~eA~~e~~~D~~EG-AD~lM-VKPa~~yLDii~~~k~~~~~P~~aYqVSGEY  289 (337)
                        |.++ +.|-. .|.-       .+.    ..++.-++|| ||+|+ -+|.+.-=|.+.++++...+.-.-|.++.-|
T Consensus       289 ~ik~~~-~~pvi~~G~i-------~~~----~~ae~~l~~g~~D~V~~gR~~iadPd~~~k~~~~l~~~~~~~~~P~~~  355 (363)
T 3l5l_A          289 RVRREA-KLPVTSAWGF-------GTP----QLAEAALQANQLDLVSVGRAHLADPHWAYFAAKELGVEKASWTLPAPY  355 (363)
T ss_dssp             HHHHHH-TCCEEECSST-------TSH----HHHHHHHHTTSCSEEECCHHHHHCTTHHHHHHHHTTCTTGGGGSCHHH
T ss_pred             HHHHHC-CCEEEEECCC-------CCH----HHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHH
T ss_conf             999865-9308997786-------999----999999987995234751998869149999997689986678788257


No 10 
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate ligand, isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=95.89  E-value=0.12  Score=30.91  Aligned_cols=133  Identities=17%  Similarity=0.143  Sum_probs=78.9

Q ss_pred             HHHHCCCCEEECCC-------------CCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCC
Q ss_conf             99962897352466-------------76779999999998778857730033666435430101675310244677774
Q gi|255764463|r  164 IQADAGADIIAPSE-------------MMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKK  230 (337)
Q Consensus       164 ~~A~AGaDivAPSd-------------MMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~  230 (337)
                      .+.++||.-|---|             -|=.||+++|.+.+..+. ++.|+.-+--|-   .|            .+.+ 
T Consensus       100 ~~~~aG~agi~iEDq~~~~~~~l~~~~e~~~kI~a~~~a~~~~~~-~~~i~ARTD~~~---~g------------~~~~-  162 (275)
T 2ze3_A          100 HFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGV-PVFLNARTDTFL---KG------------HGAT-  162 (275)
T ss_dssp             HHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTS-CCEEEEECCTTT---TT------------CSSS-
T ss_pred             HHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC-CEEEEECCHHHH---CC------------CCCH-
T ss_conf             999826868976386688887766799999999999999873588-416885022553---14------------5530-


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCC--------
Q ss_conf             431572114788988887664089879955311458999999962499899993461899999999888978--------
Q gi|255764463|r  231 TYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWIN--------  302 (337)
Q Consensus       231 sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d--------  302 (337)
                          ++....|||+-+....+-|||++.+ |+....+.|+++.+..+.|+-...+.|-- .+.-..+.|+--        
T Consensus       163 ----~~~g~deai~Ra~ay~eAGAD~ifi-~~~~~~e~i~~i~~~~~~Plnv~~~~~~~-~~~eL~~lG~~~v~~~~~~~  236 (275)
T 2ze3_A          163 ----DEERLAETVRRGQAYADAGADGIFV-PLALQSQDIRALADALRVPLNVMAFPGSP-VPRALLDAGAARVSFGQSLM  236 (275)
T ss_dssp             ----HHHHHHHHHHHHHHHHHTTCSEEEC-TTCCCHHHHHHHHHHCSSCEEEECCTTSC-CHHHHHHTTCSEEECTTHHH
T ss_pred             ----HHHHHHHHHHHHHHHHHCCCCEEEE-CCCCCHHHHHHHHHHCCCCEEEEECCCCC-CHHHHHHCCCCEEEECHHHH
T ss_conf             ----1342899999999999749999983-68899999999998669997998369999-99999984997999828999


Q ss_pred             --HHHHHHHHHHHHHHHCC
Q ss_conf             --89999999999977269
Q gi|255764463|r  303 --KNDAMMESLLAFKRAGC  319 (337)
Q Consensus       303 --~~~~~~E~l~~~kRAGA  319 (337)
                        --.++.+.+..++..|.
T Consensus       237 ~aa~~a~~~~~~~l~~~g~  255 (275)
T 2ze3_A          237 LATLGLVQRMAAELHAAEQ  255 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHCCC
T ss_conf             9999999999999985599


No 11 
>3kdn_A Rubisco, ribulose bisphosphate carboxylase; ribulose-1,5-bisphosphate carboxylase/oxygenase, Ca dioxide fixation, lyase, magnesium; HET: KCX CAP; 2.09A {Thermococcus kodakaraensis} PDB: 3a13_A* 3kdo_A* 3a12_A* 1geh_A*
Probab=95.72  E-value=0.05  Score=33.47  Aligned_cols=185  Identities=15%  Similarity=0.129  Sum_probs=108.5

Q ss_pred             CCCHHHHHHHHHHHHHC--CC--EEEECCCCCH-HH------CCCCCCCCC-----CC----CC---CHHHHHHHHHHHH
Q ss_conf             65379999999997301--44--7986133271-00------114310013-----65----44---6289999999999
Q gi|255764463|r  106 PDNLINEGICAIKKNIP--NI--GIITDVALDP-FT------IHGHDGILC-----DG----EI---VNDETIELISHAA  162 (337)
Q Consensus       106 ~dglv~rAIr~IK~~fp--dl--~vi~DVcLc~-YT------~hGHcGi~~-----~g----~I---dND~Tl~~L~k~A  162 (337)
                      +.++-+-.-..+-+.|.  ++  +-+.|+-|-+ |.      .+|-.|+=+     ++    -|   .---|-+.+++++
T Consensus        98 ~~~l~~llt~i~GNv~~~~~v~~lrL~Di~lP~~~~~~f~GP~fGI~G~R~~lgv~~RPLlgtiiKPk~GLsp~~~a~~~  177 (444)
T 3kdn_A           98 EANLPGLLASIAGNIFGMKRVKGLRLEDLYFPEKLIREFDGPAFGIEGVRKMLEIKDRPIYGVVPKPKVGYSPEEFEKLA  177 (444)
T ss_dssp             TTCHHHHHHHHTTGGGGBTTEEEEEEEEEECCHHHHTTCCCCSSHHHHHHHHHTCCSSCEEEECCSSSSCCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHH
T ss_conf             77788999999600257764554179775189999747899998768899984888884357755676689989999999


Q ss_pred             HHHHHCCCCEEEC--------CCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCC
Q ss_conf             9999628973524--------66767799999999987788577300336664354301016753102446777744315
Q gi|255764463|r  163 VIQADAGADIIAP--------SEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYL  234 (337)
Q Consensus       163 l~~A~AGaDivAP--------SdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQm  234 (337)
                      -.++..|.|+|-=        -.=++-||.++.++++                             -+-.-.|-|+-|-.
T Consensus       178 ye~~~GGvDfIKDDE~l~~q~~~p~~eRv~~~~~ai~-----------------------------~a~~eTG~~~~Ya~  228 (444)
T 3kdn_A          178 YDLLSNGADYMKDDENLTSPWYNRFEERAEIMAKIID-----------------------------KVENETGEKKTWFA  228 (444)
T ss_dssp             HHHHHTTCCEEECCTTCCSCTTSCHHHHHHHHHHHHH-----------------------------HHHHHHCCCCEEEE
T ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-----------------------------HHHHHHCCCCEEEE
T ss_conf             9997168774537734678765738999999999999-----------------------------99998688765886


Q ss_pred             CCCH-HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH---HCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf             7211-478898888766408987995531145899999996---249989999346189999999988897889999999
Q gi|255764463|r  235 DPAN-VQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKE---KFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMES  310 (337)
Q Consensus       235 d~~n-~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~---~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~  310 (337)
                      +... ..|-++.+..=.+.|+..+||-|...=++.++.+++   .+.+|+ -+|-+|-=++. .....| ++. .+   -
T Consensus       229 NIT~~~~em~~ra~~a~e~G~~~vmv~~~~~G~~al~~lr~~~~~~~l~I-h~HrA~~ga~~-r~~~~G-is~-~v---l  301 (444)
T 3kdn_A          229 NITADLLEMEQRLEVLADLGLKHAMVDVVITGWGALRYIRDLAADYGLAI-HGHRAMHAAFT-RNPYHG-ISM-FV---L  301 (444)
T ss_dssp             ECCSSHHHHHHHHHHHHHHTCCEEEEEHHHHCHHHHHHHHHHHHHHTCEE-EEECTTTHHHH-SCTTSE-ECH-HH---H
T ss_pred             ECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEE-EEECCCCEEEE-CCCCCC-CCH-HH---H
T ss_conf             14797789999999999749967999605677079999999721169558-85046650110-387776-049-99---9


Q ss_pred             HHHHHHHCCCEEEECH
Q ss_conf             9999772699998201
Q gi|255764463|r  311 LLAFKRAGCDGIFTYF  326 (337)
Q Consensus       311 l~~~kRAGAd~IitY~  326 (337)
                      ..-.+++|+|.|.+.-
T Consensus       302 ~kl~Rl~G~D~ih~~~  317 (444)
T 3kdn_A          302 AKLYRLIGIDQLHVGT  317 (444)
T ss_dssp             HHHHHHHTCSEEECCC
T ss_pred             HHHHHHHCCCEEECCC
T ss_conf             9999984858266057


No 12 
>1wdd_A Ribulose bisphosphate carboxylase large chain; rubisco, photosynthesis, alpha/beta barrel, N- methylmethionine, post-translational modification; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: c.1.14.1 d.58.9.1 PDB: 1rlc_L* 4rub_A* 3rub_L 1ej7_L 1aa1_L* 1aus_L 1rbo_L* 1rco_L* 1rcx_L* 1rxo_L* 1gk8_A* 1ir2_A* 1uzd_A* 1uzh_A* 2v69_A* 1uwa_A* 2v63_A* 2v67_A* 8ruc_A* 1upm_B* ...
Probab=94.89  E-value=0.24  Score=28.81  Aligned_cols=186  Identities=14%  Similarity=0.125  Sum_probs=111.9

Q ss_pred             CCCCCHHHHHHHHHHHHHC--CC--EEEECCCCCH-HH------CCCCCCCCC-----CC----CC---CHHHHHHHHHH
Q ss_conf             5765379999999997301--44--7986133271-00------114310013-----65----44---62899999999
Q gi|255764463|r  104 IDPDNLINEGICAIKKNIP--NI--GIITDVALDP-FT------IHGHDGILC-----DG----EI---VNDETIELISH  160 (337)
Q Consensus       104 ~n~dglv~rAIr~IK~~fp--dl--~vi~DVcLc~-YT------~hGHcGi~~-----~g----~I---dND~Tl~~L~k  160 (337)
                      |.++|+.+-....+-+.|.  ++  +-+.|+-|-+ |.      .+|-.|+=+     +.    -|   .--.+-+.+++
T Consensus       108 f~~~~i~~lltsi~GNvfg~~~~~~lRL~Dl~lP~~~~~~F~GP~fGI~G~R~~lgv~~RPLlgtiiKPklGLsp~~~A~  187 (477)
T 1wdd_A          108 FEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPTYSKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGR  187 (477)
T ss_dssp             SCTTCHHHHHHHHHSSGGGBTTEEEEEEEEEECCHHHHTTSCCCSSCHHHHHHHHTCCSSCEEECBCSSSSCCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHH
T ss_conf             47773899999997332564414555898862899999539999986188999857888861322567665789899999


Q ss_pred             HHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHH-------HHHCCCCCCCCCCCCC
Q ss_conf             999999628973524667677999999999877885773003366643543010167-------5310244677774431
Q gi|255764463|r  161 AAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRD-------AISTRDLLKGDKKTYY  233 (337)
Q Consensus       161 ~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRd-------A~~S~p~~~gdr~sYQ  233 (337)
                      ++-.++..|.|+|-=                .++..|-+            |-||++       |+.-+-.-.|.++.|-
T Consensus       188 ~~ye~~~GGvDfIKD----------------DE~ladq~------------f~p~~eRv~~v~~av~~a~~eTG~~k~y~  239 (477)
T 1wdd_A          188 ACYECLRGGLDFTKD----------------DENVNSQP------------FMRWRDRFVFCAEAIYKSQAETGEIKGHY  239 (477)
T ss_dssp             HHHHHHHTTCSEEEC----------------CTTCSSBT------------TBCHHHHHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             HHHHHHHCCCCEECC----------------CCCCCCCC------------CCCHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_conf             999998268855316----------------75557988------------78579999999999999999669866998


Q ss_pred             CCCCH--HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH---HCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf             57211--478898888766408987995531145899999996---2499899993461899999999888978899999
Q gi|255764463|r  234 LDPAN--VQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKE---KFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMM  308 (337)
Q Consensus       234 md~~n--~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~---~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~  308 (337)
                      .+..+  .+|-++.+..=.+.|++.+||-|...=++.++.+++   ...+|+.+ |-+|-=++-. ....| ++.. + +
T Consensus       240 ~NiT~~~~~em~~ra~~a~e~G~~~vmv~~~~~G~~a~~~L~~~~~~~~l~ih~-HrA~~ga~~r-~~~~G-is~~-v-l  314 (477)
T 1wdd_A          240 LNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHI-HRAMHAVIDR-QKNHG-MHFR-V-L  314 (477)
T ss_dssp             EECCCSSHHHHHHHHHHHHHHTCSEEEEEHHHHCHHHHHHHHHHHHHHTCEEEE-ECTTHHHHHS-CSSSE-ECHH-H-H
T ss_pred             ECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEE-CCCCCCCCCC-CCCCC-CCHH-H-H
T ss_conf             268889999999999999973997898604455188999999976662916887-6775512456-87776-5599-9-9


Q ss_pred             HHHHHHHHHCCCEEEE
Q ss_conf             9999997726999982
Q gi|255764463|r  309 ESLLAFKRAGCDGIFT  324 (337)
Q Consensus       309 E~l~~~kRAGAd~Iit  324 (337)
                        ..-.+=||||.|++
T Consensus       315 --~Kl~RLaGaD~ih~  328 (477)
T 1wdd_A          315 --AKALRMSGGDHIHA  328 (477)
T ss_dssp             --HHHHHHHCCSEEEC
T ss_pred             --HHHHHHCCCCCCCC
T ss_conf             --99999718782145


No 13 
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=94.83  E-value=0.22  Score=29.08  Aligned_cols=138  Identities=12%  Similarity=0.194  Sum_probs=56.9

Q ss_pred             CCCCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCH
Q ss_conf             48887-86328899999999999988893676330256334554454215765379999999997301447986133271
Q gi|255764463|r   56 INSMP-DVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDP  134 (337)
Q Consensus        56 I~SMP-Gv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~  134 (337)
                      |..|| |-|+-+.+.+++....+.+.|-.+|-+=+..                 -+...|+.|.+.  .|-|++-+-|-|
T Consensus        82 i~DmPf~sy~~~~~~~~~~A~~l~~~gadavk~eg~~-----------------~~~~~i~~l~~~--gIPV~gHiGL~P  142 (275)
T 1o66_A           82 VSDLPFGAYQQSKEQAFAAAAELMAAGAHMVKLEGGV-----------------WMAETTEFLQMR--GIPVCAHIGLTP  142 (275)
T ss_dssp             EEECCTTSSSSCHHHHHHHHHHHHHTTCSEEEEECSG-----------------GGHHHHHHHHHT--TCCEEEEEESCG
T ss_pred             EECCCHHHCCCHHHHHHHHHHHHHHCCCCCEECCCHH-----------------HHHHHHHHHHHC--CCCEEEECCCCC
T ss_conf             9467701022539999999999986485511325506-----------------589999999987--996687404675


Q ss_pred             HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECH-HHHHHHHHHC
Q ss_conf             001143100136544628999999999999996289735246676779999999998778857730033-6664354301
Q gi|255764463|r  135 FTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPY-VAKFNSSFYG  213 (337)
Q Consensus       135 YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsY-saKfaS~fYg  213 (337)
                      .+.+---|.-..|+- .++  ..|-+.|..+-+|||..|--..+-.---+.|.+.      .++++.+. |.+++..=+=
T Consensus       143 q~~~~~GG~r~~gk~-~e~--~~l~~~ak~lE~AGa~aivlE~Vp~eva~~It~~------l~IPtIGIGaG~~cDGQvL  213 (275)
T 1o66_A          143 QSVFAFGGYKVQGRG-GKA--QALLNDAKAHDDAGAAVVLMECVLAELAKKVTET------VSCPTIGIGAGADCDGQVL  213 (275)
T ss_dssp             GGTTC------------CH--HHHHHHHHHHHHTTCSEEEEESCCHHHHHHHHHH------CSSCEEEESSCSCSSEEEE
T ss_pred             EEEECCCCEECCCCH-HHH--HHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH------CCCCEEECCCCCCCCEEEE
T ss_conf             254405862214641-567--8999999999966762664103647789999853------5765653577998877878


Q ss_pred             CHHHHHHC
Q ss_conf             01675310
Q gi|255764463|r  214 PYRDAIST  221 (337)
Q Consensus       214 PFRdA~~S  221 (337)
                      =+-|.+|-
T Consensus       214 v~~DiLG~  221 (275)
T 1o66_A          214 VMHDMLGI  221 (275)
T ss_dssp             CHHHHTTC
T ss_pred             EHHHHHCC
T ss_conf             59965288


No 14 
>2d69_A Ribulose bisphosphate carboxylase; alpha/beta barrel, structural genomics, NPPSFA; 1.90A {Pyrococcus horikoshii OT3} SCOP: c.1.14.1 d.58.9.1 PDB: 2cxe_A 2cwx_A
Probab=94.70  E-value=0.1  Score=31.37  Aligned_cols=187  Identities=16%  Similarity=0.187  Sum_probs=114.3

Q ss_pred             CCCCCCCHHHHHHHHHHHHHC--CC--EEEECCCCCH-HHC------CCCCCCCC-----CC----CC---CHHHHHHHH
Q ss_conf             215765379999999997301--44--7986133271-001------14310013-----65----44---628999999
Q gi|255764463|r  102 HIIDPDNLINEGICAIKKNIP--NI--GIITDVALDP-FTI------HGHDGILC-----DG----EI---VNDETIELI  158 (337)
Q Consensus       102 eA~n~dglv~rAIr~IK~~fp--dl--~vi~DVcLc~-YT~------hGHcGi~~-----~g----~I---dND~Tl~~L  158 (337)
                      +.|.++|+-+-..-.+-+.|.  .+  +-+.|+-|-+ |..      .|-.|+=+     +.    -|   .---|.+.+
T Consensus        91 ~~f~~~~l~~lL~~i~Gn~~~~~~v~~iRL~Di~lP~~~~~~f~GP~fGi~G~R~~lgv~~RPL~gtiiKPk~GLsp~~~  170 (430)
T 2d69_A           91 TLFEEGSLVQLFSAVAGNVFGMKALKNLRLLDFHPPYEYLRHFKGPQFGVQGIREFMGVKDRPLTATVPKPKMGWSVEEY  170 (430)
T ss_dssp             GGSCTTCHHHHHHHHTTGGGGCTTEEEEEEEEEECCHHHHTTCCCCSSHHHHHHHHHTCCSSCEEEECCSSSSCCCHHHH
T ss_pred             HHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCHHHH
T ss_conf             87688858899999987056654233478961358999984689998676899998489888425414578768897999


Q ss_pred             HHHHHHHHHCCCCEEE--------CCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCC
Q ss_conf             9999999962897352--------46676779999999998778857730033666435430101675310244677774
Q gi|255764463|r  159 SHAAVIQADAGADIIA--------PSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKK  230 (337)
Q Consensus       159 ~k~Al~~A~AGaDivA--------PSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~  230 (337)
                      ++++-.++..|+|+|-        |-.=+.-||.++.++++..                             -.-.|.|+
T Consensus       171 a~~~~~~~~GGvD~IKDDE~l~d~~~~p~~eRv~~v~~ai~~a-----------------------------~~eTG~~~  221 (430)
T 2d69_A          171 AEIAYELWSGGIDLLKDDENFTSFPFNRFEERVRKLYRVRDRV-----------------------------EAETGETK  221 (430)
T ss_dssp             HHHHHHHHHTTCSEEECCTTCSCBTTBCHHHHHHHHHHHHHHH-----------------------------HHHHSSCC
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-----------------------------HHHHCCCC
T ss_conf             9999999814877245776678987676899999999999999-----------------------------99768800


Q ss_pred             CCCCCCCH-HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH---CCCCEEEEECCHHHHHHHHHHHCCCCCHHHH
Q ss_conf             43157211-4788988887664089879955311458999999962---4998999934618999999998889788999
Q gi|255764463|r  231 TYYLDPAN-VQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEK---FGLPTFAYQVSGEYAMIKAASLQGWINKNDA  306 (337)
Q Consensus       231 sYQmd~~n-~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~---~~~P~~aYqVSGEYami~~a~~~g~~d~~~~  306 (337)
                      -|-.+... ..|-++.++.=.+.|++.+||-|...-++.++.+++.   +.+|+ -+|-+|--++-. .-..|+ +.  .
T Consensus       222 ~Ya~NIT~~~~em~~ra~~~~~~G~~~vmv~~~~~G~~al~~lr~~~~~~~l~I-haHra~~ga~tr-~~~~Gi-s~--~  296 (430)
T 2d69_A          222 EYLINITGPVNIMEKRAEMVANEGGQYVMIDIVVAGWSALQYMREVTEDLGLAI-HAHRAMHAAFTR-NPRHGI-TM--L  296 (430)
T ss_dssp             EEECBCCSSHHHHHHHHHHHHHHTCCEEEEEHHHHCHHHHHHHHHHHHHHTCEE-EEECTTTHHHHS-CTTSEE-CH--H
T ss_pred             EEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEE-EECCCCCCCCCC-CCCCCC-CH--H
T ss_conf             799864687556789999999759957950455562489999998666477278-753355631015-888870-79--9


Q ss_pred             HHHHHHHHHHHCCCEEEE
Q ss_conf             999999997726999982
Q gi|255764463|r  307 MMESLLAFKRAGCDGIFT  324 (337)
Q Consensus       307 ~~E~l~~~kRAGAd~Iit  324 (337)
                      ++  -.-.+=||||.|++
T Consensus       297 vl--~kL~RLaGaD~ih~  312 (430)
T 2d69_A          297 AL--AKAARMIGVDQIHT  312 (430)
T ss_dssp             HH--HHHHHHHTCSEEEC
T ss_pred             HH--HHHHHHCCCCEEEC
T ss_conf             99--99999829883341


No 15 
>3nwr_A A rubisco-like protein; lyase; HET: KCX; 1.50A {Burkholderia fungorum}
Probab=94.51  E-value=0.11  Score=31.12  Aligned_cols=136  Identities=12%  Similarity=0.097  Sum_probs=94.6

Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEC--------CCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCC
Q ss_conf             99999999999999628973524--------6676779999999998778857730033666435430101675310244
Q gi|255764463|r  153 ETIELISHAAVIQADAGADIIAP--------SEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDL  224 (337)
Q Consensus       153 ~Tl~~L~k~Al~~A~AGaDivAP--------SdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~  224 (337)
                      .|-+.+++++..++..|+|+|-=        -.=+.-||.++.+++++.                             ..
T Consensus       174 Lsp~~~a~~~~~~~~GGvD~IKDDE~l~nq~~~p~~eRv~~~~~a~~~a-----------------------------~~  224 (432)
T 3nwr_A          174 LSAAETAALVRELCEAGVDFIKDDEVCANPAHAPLAERVRAVMSEVRRY-----------------------------RE  224 (432)
T ss_dssp             CCHHHHHHHHHHHHHHTCSEEECCTTCSSCTTSCHHHHHHHHHHHHHHH-----------------------------HH
T ss_pred             CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-----------------------------HH
T ss_conf             8978989999999964688434775567976677999999999999999-----------------------------99


Q ss_pred             CCCCCCCCCCCCCHH-HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCH
Q ss_conf             677774431572114-7889888876640898799553114589999999624998999934618999999998889788
Q gi|255764463|r  225 LKGDKKTYYLDPANV-QEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINK  303 (337)
Q Consensus       225 ~~gdr~sYQmd~~n~-~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~  303 (337)
                      -.|.|+-|-.+.... .|-++.+..=.+.|++.+||-|...=++.++.+++.+.+|+ -+|-+|-.++-. ....| ++.
T Consensus       225 eTG~~~lYa~NiT~~~~em~~ra~~a~~~G~~~vmv~~~~~G~~~l~~l~~~~~i~i-H~H~ag~g~~~r-~~~~G-is~  301 (432)
T 3nwr_A          225 RSGRPVMVAFNITDDLDAMRRHAELVEREGGSCVMASINWCGFSAIQSLRRTTPLVL-HAHRNGYGMMSR-DPALG-MSF  301 (432)
T ss_dssp             HHSCCCEEEEECCSCHHHHHHHHHHHHHTTCCEEEEEHHHHCHHHHHHHHHHCCSEE-EEECTTTTTTTS-STTEE-ECH
T ss_pred             HHCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCEE-EECCCCCCCCCC-CCCCC-CCH
T ss_conf             869874899556899999999999999809977998313331799999998589578-723342403247-98767-268


Q ss_pred             HHHHHHHHHHHHHHCCCEEEE
Q ss_conf             999999999997726999982
Q gi|255764463|r  304 NDAMMESLLAFKRAGCDGIFT  324 (337)
Q Consensus       304 ~~~~~E~l~~~kRAGAd~Iit  324 (337)
                      .  ++  -.-.+-||||.|++
T Consensus       302 ~--vl--~kL~RLaGaD~ih~  318 (432)
T 3nwr_A          302 Q--AY--QTLWRLSGVDHMHV  318 (432)
T ss_dssp             H--HH--HHHHHTBTCSEEEE
T ss_pred             H--HH--HHHHHHCCCCEEEE
T ss_conf             9--99--99999829993230


No 16 
>2oem_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; rubisco-like protein, isomerase; HET: KCX 1AE; 1.70A {Geobacillus kaustophilus} PDB: 2oel_A* 2oek_A* 2oej_A
Probab=94.23  E-value=0.28  Score=28.36  Aligned_cols=136  Identities=19%  Similarity=0.216  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHHHHHHCCCCEEECC--------CCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCC
Q ss_conf             999999999999996289735246--------676779999999998778857730033666435430101675310244
Q gi|255764463|r  153 ETIELISHAAVIQADAGADIIAPS--------EMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDL  224 (337)
Q Consensus       153 ~Tl~~L~k~Al~~A~AGaDivAPS--------dMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~  224 (337)
                      -|-+.+++++..++..|+|+|-=-        .=+.-||.++.++.++                             +-.
T Consensus       152 Lsp~~~a~~~~~~~~GGvDfIKDDE~lan~~~~p~~eRv~~~~~ai~~-----------------------------a~~  202 (413)
T 2oem_A          152 RDLAYLTSELKKQALGGVDLVKDDEILFDSELLPFEKRITEGKAALQE-----------------------------VYE  202 (413)
T ss_dssp             CCHHHHHHHHHHHHHTTCSEEECCTTCCCCSSSCHHHHHHHHHHHHHH-----------------------------HHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----------------------------HHH
T ss_conf             997899999999987158832366557797657489999999999999-----------------------------999


Q ss_pred             CCCCCCCCCCCCCH-HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHC--CCCEEE-EECCHHHHHHHHHHHCCC
Q ss_conf             67777443157211-47889888876640898799553114589999999624--998999-934618999999998889
Q gi|255764463|r  225 LKGDKKTYYLDPAN-VQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKF--GLPTFA-YQVSGEYAMIKAASLQGW  300 (337)
Q Consensus       225 ~~gdr~sYQmd~~n-~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~--~~P~~a-YqVSGEYami~~a~~~g~  300 (337)
                      -.|-|+-|-.+... ..|-++.+..-.+.|+..+||-|...-++.++.++...  ++|+.+ .+.+|-|..   .-..| 
T Consensus       203 ~TG~~~~Ya~Nit~~~~em~~ra~~~~~~G~~~~mi~~~~~G~~a~~~l~~~~~~~lpi~aH~a~~g~~~~---~~~~G-  278 (413)
T 2oem_A          203 QTGKRTLYAVNLTGKTFALKDKAKRAAELGADVLLFNVFAYGLDVLQALREDEEIAVPIMAHPAFSGAVTP---SEFYG-  278 (413)
T ss_dssp             HHSCCCEEEEECCSCGGGHHHHHHHHHHTTCSEEEECGGGSCHHHHHHHHHCTTTCCCEEECCTTGGGTSS---CSSSS-
T ss_pred             HHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEECCCCCCEECC---CCCCC-
T ss_conf             86897459976488989999999999975997899825656489999998635458703440255300014---88886-


Q ss_pred             CCHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             788999999999997726999982
Q gi|255764463|r  301 INKNDAMMESLLAFKRAGCDGIFT  324 (337)
Q Consensus       301 ~d~~~~~~E~l~~~kRAGAd~Iit  324 (337)
                      ++.. +++-  .-.+-||||.|++
T Consensus       279 i~~~-v~l~--kl~RLaGaD~i~~  299 (413)
T 2oem_A          279 VAPS-LWLG--KLLRLAGADFVLF  299 (413)
T ss_dssp             BCHH-HHTT--HHHHHHTCSEEEE
T ss_pred             EEHH-HHHH--HHHHHCCCCCEEC
T ss_conf             1079-9999--9999809783010


No 17 
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655}
Probab=94.10  E-value=0.38  Score=27.54  Aligned_cols=110  Identities=20%  Similarity=0.210  Sum_probs=68.6

Q ss_pred             HHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf             99999999987788577300336664354301016753102446777744315721147889888876640898799553
Q gi|255764463|r  182 RVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKP  261 (337)
Q Consensus       182 rV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKP  261 (337)
                      .+..||.+++...-.+..|++-+-=+.                           ...-.|||+-.....+-|||+++| |
T Consensus       140 ~~~ki~Aa~~a~~~~~~~I~ARtda~~---------------------------~~gl~eAi~Ra~aY~~AGAD~ifi-~  191 (298)
T 3eoo_A          140 MVDRIKAAVDARTDETFVIMARTDAAA---------------------------AEGIDAAIERAIAYVEAGADMIFP-E  191 (298)
T ss_dssp             HHHHHHHHHHHCSSTTSEEEEEECTHH---------------------------HHHHHHHHHHHHHHHHTTCSEEEE-C
T ss_pred             HHHHHHHHHHHCCCCCEEEEEECCCCC---------------------------CCCHHHHHHHHHHHHHHCCCEEEE-C
T ss_conf             999999999835797548997021011---------------------------168999999999999807948960-5


Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEECCH-HHH--HHHHHHHCCC-----CC-----HHHHHHHHHHHHHHHCC
Q ss_conf             11458999999962499899993461-899--9999998889-----78-----89999999999977269
Q gi|255764463|r  262 GLPYLDVCFRIKEKFGLPTFAYQVSG-EYA--MIKAASLQGW-----IN-----KNDAMMESLLAFKRAGC  319 (337)
Q Consensus       262 a~~yLDii~~~k~~~~~P~~aYqVSG-EYa--mi~~a~~~g~-----~d-----~~~~~~E~l~~~kRAGA  319 (337)
                      +..-.|.|+.+.+....|+.+-.+.| +..  -..-..+.|+     -.     .-.++.+.+..+++.|-
T Consensus       192 ~~~~~~~i~~~~~~~~~Pl~~~~~~~~~~p~~s~~eL~~lG~~~i~~~~~~~raa~~a~~~~~~~l~~~G~  262 (298)
T 3eoo_A          192 AMKTLDDYRRFKEAVKVPILANLTEFGSTPLFTLDELKGANVDIALYCCGAYRAMNKAALNFYETVRRDGT  262 (298)
T ss_dssp             CCCSHHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHHHHTTCCEEEECSHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             88999999999986699878663467888631065899779559986129999999999999999998289


No 18 
>2zvi_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; methionine salvage pathway, amino-acid biosynthesis, isomerase, magnesium, metal- binding; 2.30A {Bacillus subtilis}
Probab=94.09  E-value=0.35  Score=27.74  Aligned_cols=139  Identities=19%  Similarity=0.168  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHHHHHHCCCCEEECC--------CCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCC
Q ss_conf             8999999999999996289735246--------67677999999999877885773003366643543010167531024
Q gi|255764463|r  152 DETIELISHAAVIQADAGADIIAPS--------EMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRD  223 (337)
Q Consensus       152 D~Tl~~L~k~Al~~A~AGaDivAPS--------dMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p  223 (337)
                      -.|.+.+++++..++..|+|+|-=-        .=++-||.++.++++                             -+-
T Consensus       165 Glsp~~~a~~~~e~~~GGvDfIKDDE~l~~q~~~p~~eRv~~~~eai~-----------------------------~a~  215 (425)
T 2zvi_A          165 GRDLSDIKEQLRQQALGGVDLIKDDEIFFETGLAPFETRIAEGKQILK-----------------------------ETY  215 (425)
T ss_dssp             TCCHHHHHHHHHHHHHTTCSEEECCTTCCCSSSSCHHHHHHHHHHHHH-----------------------------HHH
T ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-----------------------------HHH
T ss_conf             899899999999999607885567644579876858999999999999-----------------------------999


Q ss_pred             CCCCCCCCCCCCCCH-HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH--CCCCEEEEECCHHHHHHHHHHHCCC
Q ss_conf             467777443157211-4788988887664089879955311458999999962--4998999934618999999998889
Q gi|255764463|r  224 LLKGDKKTYYLDPAN-VQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEK--FGLPTFAYQVSGEYAMIKAASLQGW  300 (337)
Q Consensus       224 ~~~gdr~sYQmd~~n-~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~--~~~P~~aYqVSGEYami~~a~~~g~  300 (337)
                      .-.|-|+-|-.+... ..|-++.+..=.+.|++.+||-|...-++.++.++..  +++|+. +|-+|--++.. .-..|+
T Consensus       216 ~eTG~~~~Ya~NiTg~~~em~~ra~~a~~~G~~~vmi~~~~~G~~~~~~l~~~~~~~lpIh-aHra~~ga~~~-~~~~Gi  293 (425)
T 2zvi_A          216 EQTGHKTLYAVNLTGRTADLKDKARRAAELGADALLFNVFAYGLDVMQGLAEDPEIPVPIM-AHPAVSGAFTS-SPFYGF  293 (425)
T ss_dssp             HHHSCCCEEEEECCSCGGGHHHHHHHHHHTTCSEEEECGGGTCHHHHHHHHHCTTCCSCEE-ECCTTGGGGTS-CSSSEE
T ss_pred             HHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEE-EECCCCCEEEC-CCCCCC
T ss_conf             9868961587205898799999999999739973776412022889999997467895389-70143432540-777761


Q ss_pred             CCHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf             7889999999999977269999820
Q gi|255764463|r  301 INKNDAMMESLLAFKRAGCDGIFTY  325 (337)
Q Consensus       301 ~d~~~~~~E~l~~~kRAGAd~IitY  325 (337)
                      . . ..++-  .-.+=||||.+++-
T Consensus       294 ~-~-~~vl~--kL~RLaGaD~~~~~  314 (425)
T 2zvi_A          294 S-H-ALLLG--KLNRYCGADFSLFP  314 (425)
T ss_dssp             C-H-HHHTT--HHHHHTTCSEEEEC
T ss_pred             C-H-HHHHH--HHHHHCCCCEEECC
T ss_conf             0-8-99999--99998097833667


No 19 
>3fk4_A Rubisco-like protein; structural genomics, target 9463A, PSI-2, protein structure initiative; 2.00A {Bacillus cereus atcc 14579}
Probab=94.06  E-value=0.27  Score=28.50  Aligned_cols=139  Identities=19%  Similarity=0.149  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHH-------HHHCCCC
Q ss_conf             899999999999999628973524667677999999999877885773003366643543010167-------5310244
Q gi|255764463|r  152 DETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRD-------AISTRDL  224 (337)
Q Consensus       152 D~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRd-------A~~S~p~  224 (337)
                      -.|-+.+++++..++..|+|+|-=-                ++..|-            -|-||+|       |++.+-.
T Consensus       152 Glsp~~~a~~~~e~~~GGvDfIKDD----------------E~la~~------------~~~p~~eRv~~v~~ai~~a~~  203 (414)
T 3fk4_A          152 GRNIGYLKTQLRDQAIGGVDIVKDD----------------EILFEN------------ALTPLTKRIVSGKEVLQSVYE  203 (414)
T ss_dssp             TCCHHHHHHHHHHHHHTTCSEEECC----------------TTCCSC------------SSSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCC----------------CCCCCC------------CCCCHHHHHHHHHHHHHHHHH
T ss_conf             8986688999999997078863476----------------556797------------667488899999999999999


Q ss_pred             CCCCCCCCCCCCCHH-HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHHHCCCC
Q ss_conf             677774431572114-7889888876640898799553114589999999624--9989999346189999999988897
Q gi|255764463|r  225 LKGDKKTYYLDPANV-QEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKF--GLPTFAYQVSGEYAMIKAASLQGWI  301 (337)
Q Consensus       225 ~~gdr~sYQmd~~n~-~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~--~~P~~aYqVSGEYami~~a~~~g~~  301 (337)
                      -.|-|+-|-.+.... .|-++.+..=.+.|++.+||-|...-++.++.+++..  ++|+. +|-.|--++-. .-..|+ 
T Consensus       204 ~TG~k~~Ya~NiT~~~~em~~ra~~a~~~G~~~vmi~~~~~G~~~~~~l~~~~~~~lpI~-aHra~~g~~~r-~~~~Gi-  280 (414)
T 3fk4_A          204 TYGHKTLYAVNLTGRTFDLKENAKRAVQAGADILLFNVFAYGLDVLQSLAEDDEIPVPIM-AHPAVSGAYSA-SKLYGV-  280 (414)
T ss_dssp             HHCCCCEEEEECCSCGGGHHHHHHHHHHHTCSEEEECHHHHCHHHHHHHHHCTTSCSCEE-ECCTTTHHHHS-CSSSSB-
T ss_pred             HHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEE-ECCCCCCEECC-CCCCCC-
T ss_conf             868965477552799899999999999859978999665350999999985678785378-51476501314-887763-


Q ss_pred             CHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             88999999999997726999982
Q gi|255764463|r  302 NKNDAMMESLLAFKRAGCDGIFT  324 (337)
Q Consensus       302 d~~~~~~E~l~~~kRAGAd~Iit  324 (337)
                      +.. +++-  .-.+-||||.++.
T Consensus       281 ~~~-~~~~--kl~RLaGaD~~~~  300 (414)
T 3fk4_A          281 SSP-LLLG--KLLRYAGADFSLF  300 (414)
T ss_dssp             CHH-HHHT--HHHHHHTCSEEEE
T ss_pred             CHH-HHHH--HHHHHCCCCCCCC
T ss_conf             439-9999--9999717884412


No 20 
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; YP_293392.1, prokaryotic protein of unknown function (DUF849), structural genomics; HET: MSE; 1.72A {Ralstonia eutropha JMP134}
Probab=93.58  E-value=0.27  Score=28.48  Aligned_cols=93  Identities=17%  Similarity=0.183  Sum_probs=68.7

Q ss_pred             HHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CCCCCCCCCCC
Q ss_conf             63477888773311666758988110488878632889999999999998889367633025633455-44542157653
Q gi|255764463|r   30 VREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRN-NTGSHIIDPDN  108 (337)
Q Consensus        30 v~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd-~~GseA~n~dg  108 (337)
                      .-|.+|.....--|++|+--.|.-..-+++=-.-=++.+++.+++.+|++.|-..+=+-+      +| ++|..+++++ 
T Consensus        10 ~~~~~~~~~~M~~~~iIt~A~nGa~~tk~~~P~lP~TpeEia~~A~~c~~AGAsivHlHv------Rd~~dG~~s~D~~-   82 (316)
T 3c6c_A           10 HHHENLYFQGMSRKVILTCAVTGNAPFNPKHPSMPITPAQIADACVEAAKAGASVAHIHV------RDPKTGGGSRDPV-   82 (316)
T ss_dssp             -----------CCEECEEEECCCSSCCCTTSTTCCCSHHHHHHHHHHHHHHTCSEEEECE------ECTTTCCEECCHH-
T ss_pred             HHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEE------CCCCCCCCCCCHH-
T ss_conf             238889997189975999867899597123999989999999999999982753899764------5788898579999-


Q ss_pred             HHHHHHHHHHHHHCCCEEEEC
Q ss_conf             799999999973014479861
Q gi|255764463|r  109 LINEGICAIKKNIPNIGIITD  129 (337)
Q Consensus       109 lv~rAIr~IK~~fpdl~vi~D  129 (337)
                      .+.++|..|++..||+.|..-
T Consensus        83 ~y~e~i~~Ir~~~pd~ii~~T  103 (316)
T 3c6c_A           83 LFKEVVDRVRSSGTDIVLNLT  103 (316)
T ss_dssp             HHHHHHHHHHTTTCCCEEEEE
T ss_pred             HHHHHHHHHHHHCCCCEEEEC
T ss_conf             999999999976798279843


No 21 
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=93.48  E-value=0.17  Score=29.86  Aligned_cols=105  Identities=18%  Similarity=0.323  Sum_probs=53.0

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCC
Q ss_conf             78632889999999999998889367633025633455445421576537999999999730144798613327100114
Q gi|255764463|r   60 PDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHG  139 (337)
Q Consensus        60 PGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hG  139 (337)
                      |.-.+++++-+++.++++.+.|...|.        .||..|-  ..|. -+.+-|++||+.+|++-         ..-|+
T Consensus       253 ~~~~~~~~d~~~~~a~~~~~~Gad~I~--------ikDt~G~--l~P~-~v~~lV~alr~~~p~ip---------I~~H~  312 (718)
T 3bg3_A          253 PSRTKYSLQYYMGLAEELVRAGTHILC--------IKDMAGL--LKPT-ACTMLVSSLRDRFPDLP---------LHIHT  312 (718)
T ss_dssp             TTCCTTCHHHHHHHHHHHHHHTCSEEE--------EECTTSC--CCHH-HHHHHHHHHHHHSTTCC---------EEEEC
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCEEE--------ECCCCCC--CCHH-HHHHHHHHHHHHCCCCE---------EEEEE
T ss_conf             877756799999999999974998899--------4477646--6899-99999999997288707---------99950


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECC-CCCCCH-----HHHHHHHHHHCCCC
Q ss_conf             3100136544628999999999999996289735246-676779-----99999999877885
Q gi|255764463|r  140 HDGILCDGEIVNDETIELISHAAVIQADAGADIIAPS-EMMDGR-----VQEIRKKLDSHGHI  196 (337)
Q Consensus       140 HcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPS-dMMDGr-----V~aIR~~Ld~~g~~  196 (337)
                      ||-   .|-         =.--++.-++||||+|--+ .=|-||     ...+=.+|...|+.
T Consensus       313 Hnd---~Gl---------AvAn~laAveAGad~VD~ti~glGertGnp~le~vva~L~~~g~d  363 (718)
T 3bg3_A          313 HDT---SGA---------GVAAMLACAQAGADVVDVAADSMSGMTSQPSMGALVACTRGTPLD  363 (718)
T ss_dssp             CCT---TSC---------HHHHHHHHHHTTCSEEEEBCGGGCSTTSCCBHHHHHHHHTTSTTC
T ss_pred             CCC---CCH---------HHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf             797---363---------999999999839998842135666866887799999998605988


No 22 
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=93.08  E-value=0.55  Score=26.41  Aligned_cols=78  Identities=19%  Similarity=0.258  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf             99999999987788577300336664354301016753102446777744315721147889888876640898799553
Q gi|255764463|r  182 RVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKP  261 (337)
Q Consensus       182 rV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKP  261 (337)
                      .+..||.+++..+-.+..|++-+-=+.+                           ..-.||++-+....+-|||++++ |
T Consensus       136 ~~~ki~aa~~a~~~~df~IiARTDa~~~---------------------------~g~deAi~Ra~aY~~AGAD~if~-~  187 (295)
T 1xg4_A          136 MVDRIRAAVDAKTDPDFVIMARTDALAV---------------------------EGLDAAIERAQAYVEAGAEMLFP-E  187 (295)
T ss_dssp             HHHHHHHHHHHCSSTTSEEEEEECCHHH---------------------------HCHHHHHHHHHHHHHTTCSEEEE-T
T ss_pred             HHHHHHHHHHHCCCCCEEEEECCCCCCC---------------------------CCHHHHHHHHHHHHHHCCCEEEE-C
T ss_conf             9999999997368998388962564200---------------------------48799999999999818958984-4


Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEECCH
Q ss_conf             11458999999962499899993461
Q gi|255764463|r  262 GLPYLDVCFRIKEKFGLPTFAYQVSG  287 (337)
Q Consensus       262 a~~yLDii~~~k~~~~~P~~aYqVSG  287 (337)
                      +..-.|.++.+.+.+..|+.+-.+.|
T Consensus       188 ~~~~~~~i~~~~~~~~~Pl~~~~~~~  213 (295)
T 1xg4_A          188 AITELAMYRQFADAVQVPILANITEF  213 (295)
T ss_dssp             TCCSHHHHHHHHHHHCSCBEEECCSS
T ss_pred             CCCCHHHHHHHHHHCCCCEEEEECCC
T ss_conf             78869999999985599866445688


No 23 
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=92.79  E-value=0.4  Score=27.36  Aligned_cols=79  Identities=14%  Similarity=0.212  Sum_probs=59.2

Q ss_pred             CCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             11666758988110488878632889999999999998889367633025633455445421576537999999999730
Q gi|255764463|r   42 LPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI  121 (337)
Q Consensus        42 ~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f  121 (337)
                      -|++|+--.|.-.+-+++--.-=++.+++.+++.+|++.|-..+=+.      -+|+.|..+++++ ..-++|..|++..
T Consensus         4 ~pviI~~A~nGa~~~k~~~P~lPiTp~Eia~~A~~c~~AGAsivHlH------~Rd~dg~~s~d~~-~y~e~i~~iR~~~   76 (275)
T 3no5_A            4 KPCIISVAITGSLPRKKDNPAVPITVSEQVESTQAAFEAGATLVHLH------VRNDDETPTSNPD-RFALVLEGIRKHA   76 (275)
T ss_dssp             CCBCEEEECCCSSCCTTTCTTSCCSHHHHHHHHHHHHHHTCCEEEEC------EECTTSCEECCHH-HHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE------ECCCCCCCCCCHH-HHHHHHHHHHHHC
T ss_conf             98799984789979844699998998999999999998177489988------5389989678999-9999999999866


Q ss_pred             CCCEEE
Q ss_conf             144798
Q gi|255764463|r  122 PNIGII  127 (337)
Q Consensus       122 pdl~vi  127 (337)
                      |++.+-
T Consensus        77 p~~ii~   82 (275)
T 3no5_A           77 PGMITQ   82 (275)
T ss_dssp             TTCEEE
T ss_pred             CCCEEE
T ss_conf             883563


No 24 
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=92.43  E-value=0.43  Score=27.14  Aligned_cols=214  Identities=11%  Similarity=0.067  Sum_probs=111.0

Q ss_pred             HHHHHHHHHHHHCCCCEEEE--EECCCCCCCCCCCCCCCCC---CCHHHHHHHHHHHHHC--CCEEEECCCCCHHHCCCC
Q ss_conf             99999999999888936763--3025633455445421576---5379999999997301--447986133271001143
Q gi|255764463|r   68 DVAVEKIKQVADLGIPAIAI--FPNIPMDLRNNTGSHIIDP---DNLINEGICAIKKNIP--NIGIITDVALDPFTIHGH  140 (337)
Q Consensus        68 d~L~~eie~~~~lGI~av~L--Fp~I~~~~Kd~~GseA~n~---dglv~rAIr~IK~~fp--dl~vi~DVcLc~YT~hGH  140 (337)
                      |.+.+.-+.-++.|-.-|.-  |...+..+++ .|.+....   ..+...+.+..|+.-+  +..|..++  .|+.... 
T Consensus        54 e~V~~iH~~Yi~AGAdII~TNTf~a~~~~L~~-~g~~~~e~~~~~~~~~aa~~~ar~a~~~~~~~vaGsi--gp~~~~~-  129 (406)
T 1lt8_A           54 EAVRQLHREFLRAGSNVMQTFTFYASEDKLEN-RGNYVLEKISGQEVNEAAADIARQVADEGDALVAGGV--SQTPSYL-  129 (406)
T ss_dssp             HHHHHHHHHHHHTTCSEEECSCTTCSSCC--------------CHHHHHHHHHHHHHHHTTTTCEEEEEE--CCCHHHH-
T ss_pred             HHHHHHHHHHHHHCCCEEECCCCCCCHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC--CCCCCCC-
T ss_conf             99999999999975999995777146999997-1436589999999999999999874335684343266--7664334-


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEE-CHHHHHHHHHHCCHHHHH
Q ss_conf             1001365446289999999999999962897352466767799999999987788577300-336664354301016753
Q gi|255764463|r  141 DGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIM-PYVAKFNSSFYGPYRDAI  219 (337)
Q Consensus       141 cGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~Im-sYsaKfaS~fYgPFRdA~  219 (337)
                            +...-++-.+...+|+..+.++|+|++.---|.|  +..++.+++...-.+.+++ |.+               
T Consensus       130 ------~~~~~~e~~~~~~eqi~~l~~~gvD~il~ETm~~--~~Ea~aa~~a~~~~~~Pv~vs~t---------------  186 (406)
T 1lt8_A          130 ------SAKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEH--VEEAVWAVETLIASGKPVAATMA---------------  186 (406)
T ss_dssp             ------TTCHHHHHHHHHHHHHHHHHHHTCSEEEECCCSC--HHHHHHHHHHHGGGTSCEEEEEC---------------
T ss_pred             ------CCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH--HHHHHHHHHHHHCCCCCEEEEEE---------------
T ss_conf             ------6899899999999999999835887000467767--89999999997614885689978---------------


Q ss_pred             HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCC---HHHHHHHHHHHHH-----CCCCEEEEECCHHHHH
Q ss_conf             1024467777443157211478898888766408987995531---1458999999962-----4998999934618999
Q gi|255764463|r  220 STRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPG---LPYLDVCFRIKEK-----FGLPTFAYQVSGEYAM  291 (337)
Q Consensus       220 ~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa---~~yLDii~~~k~~-----~~~P~~aYqVSGEYam  291 (337)
                           +..+.+   +.-....|+..+.   .+.|+|.+.+-=+   -..+..+..+++.     ...|+.+|-.++.|. 
T Consensus       187 -----~~~~g~---l~~g~~~e~~~~~---~~~~~~~vGiNC~~gp~~~~~~i~~l~~~~~~~~~~~~~~~~p~~~~~p-  254 (406)
T 1lt8_A          187 -----IGPEGD---LHGVPPGEAAVRL---VKAGASIIGVNCHFDPTISLKTVKLMKEGLEAAQLKAHLMSQPLAYHTP-  254 (406)
T ss_dssp             -----CBTTBC---TTCCCHHHHHHHH---HTTTCSEEEEESSSCHHHHHHHHHHHHHHHHTTTCCCEEEEECCSBCCT-
T ss_pred             -----ECCCCC---CCCCCHHHHHHHH---HHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCC-
T ss_conf             -----757987---3898869999998---7327787986247888999999999998776524666433036612488-


Q ss_pred             HHHHHHCCCCC-------------HHHHHHHHHHHHHHHCCCEE
Q ss_conf             99999888978-------------89999999999977269999
Q gi|255764463|r  292 IKAASLQGWIN-------------KNDAMMESLLAFKRAGCDGI  322 (337)
Q Consensus       292 i~~a~~~g~~d-------------~~~~~~E~l~~~kRAGAd~I  322 (337)
                        .+...||.+             ...-+-|....+...|+++|
T Consensus       255 --na~~~~~~~~p~~~~~~~~~~~~~~~~a~~a~~~~~~Ga~II  296 (406)
T 1lt8_A          255 --DANKQGFIDLPEFPFGLEPRVATRWDIQKYAREAYNLGVRYI  296 (406)
T ss_dssp             --TCCTTCGGGSTTTTTSCGGGBCCHHHHHHHHHHHHHHTEEEE
T ss_pred             --CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf             --887767578986657766442589999999999998199975


No 25 
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=92.38  E-value=0.49  Score=26.78  Aligned_cols=80  Identities=14%  Similarity=0.204  Sum_probs=57.4

Q ss_pred             CCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             11666758988110488878632889999999999998889367633025633455445421576537999999999730
Q gi|255764463|r   42 LPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI  121 (337)
Q Consensus        42 ~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f  121 (337)
                      .|+.|+--.|--..-+..=-.-=++.+++.+++..|++.|-..|=+.      -+|++|..+++++ ....++..|++..
T Consensus         8 ~pvII~vA~nGa~~tk~~~P~lP~TpeEia~~A~~c~~AGAsivH~H------~Rd~~G~~sld~~-~y~e~i~~ir~~~   80 (284)
T 3chv_A            8 KPCIICVAITGSVPTKADNPAVPITVSEQVESTQEAFEAGAAIAHCH------VRNDDGTPSSDPD-RFARLTEGLHTHC   80 (284)
T ss_dssp             CCBCEEEECCCSSCCTTTCTTCCCSHHHHHHHHHHHHHHTCCEEEEC------EECTTSCEECCHH-HHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE------ECCCCCCCCCCHH-HHHHHHHHHHHHC
T ss_conf             97799983789969845599998998999999999998188689986------4189939777889-9999999999867


Q ss_pred             CCCEEEE
Q ss_conf             1447986
Q gi|255764463|r  122 PNIGIIT  128 (337)
Q Consensus       122 pdl~vi~  128 (337)
                      |++.|-.
T Consensus        81 p~~ii~~   87 (284)
T 3chv_A           81 PGMIVQF   87 (284)
T ss_dssp             TTCEEEE
T ss_pred             CEEEEEE
T ss_conf             8028975


No 26 
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2- propyl-3-methylmalate lyase; 2.70A {Dianthus caryophyllus}
Probab=91.35  E-value=0.42  Score=27.24  Aligned_cols=49  Identities=22%  Similarity=0.238  Sum_probs=44.7

Q ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCH
Q ss_conf             14788988887664089879955311458999999962499899993461
Q gi|255764463|r  238 NVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSG  287 (337)
Q Consensus       238 n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSG  287 (337)
                      .-.|||.......+-|||+++| |+..-.|-|+.+.+.+..|+.+..+.|
T Consensus       187 gl~eai~Ra~aY~eAGAD~ifi-~g~~~~~~i~~~~~~~~~p~~~~~~~g  235 (318)
T 1zlp_A          187 GLEEGIRRANLYKEAGADATFV-EAPANVDELKEVSAKTKGLRIANMIEG  235 (318)
T ss_dssp             HHHHHHHHHHHHHHTTCSEEEE-CCCCSHHHHHHHHHHSCSEEEEEECTT
T ss_pred             CCHHHHHHHHHHHHCCCCEEEC-CCCCCHHHHHHHHHHCCCCCCCEECCC
T ss_conf             8188999999999808988853-678999999999997589833523799


No 27 
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=90.92  E-value=0.33  Score=27.91  Aligned_cols=164  Identities=14%  Similarity=0.256  Sum_probs=106.4

Q ss_pred             HHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHH
Q ss_conf             99999999973014479861332710011431001365446289999999999999962897352466767799999999
Q gi|255764463|r  110 INEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKK  189 (337)
Q Consensus       110 v~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~  189 (337)
                      +.++++.+-+.-||.+++.  |  ..      |-+-.|. +-|+-++.-....+.-+..|+-++.|+       .|+-++
T Consensus        79 l~~a~~~l~~~~~d~I~~g--c--Ts------as~~~G~-~~~~~~~~~i~~~i~~~~~~~pv~t~~-------~Ai~~A  140 (273)
T 2xed_A           79 RERCVLEIADAAPEVILYA--C--LV------AVMVGGP-GEHHRVESAVAEQLATGGSQALVRSSA-------GALVEG  140 (273)
T ss_dssp             HHHHHHHHHTTCCSEEEEC--C--HH------HHHTTCT-THHHHHHHHHHHHHHHTTCCCEEEEHH-------HHHHHH
T ss_pred             HHHHHHHHHCCCCCEEEEE--C--CH------HEEECCC-HHHHHHHHHHHHHHHCCCCCCCCCCHH-------HHHHHH
T ss_conf             8999986420466778870--4--30------0145275-077899999999985169998422789-------999999


Q ss_pred             HHHCCCCCCCEE-CHHHHHHHHHHCCHHHHH----HCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECC-
Q ss_conf             987788577300-336664354301016753----102446--777744315721147889888876640898799553-
Q gi|255764463|r  190 LDSHGHINVGIM-PYVAKFNSSFYGPYRDAI----STRDLL--KGDKKTYYLDPANVQEAIREASIDIQESADMLLVKP-  261 (337)
Q Consensus       190 Ld~~g~~~~~Im-sYsaKfaS~fYgPFRdA~----~S~p~~--~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKP-  261 (337)
                      |..-|...+.++ .|...-...+..=|+++=    ... .|  ..+..-+++++..-.+++++..   .+++|-+.|-= 
T Consensus       141 L~~lgakrIallTPY~~~v~~~~~~~~~~~G~eV~~~~-~l~~~~~~~ia~i~~~~i~~a~~~~~---~~~~DAI~IsCt  216 (273)
T 2xed_A          141 LRALDAQRVALVTPYMRPLAEKVVAYLEAEGFTISDWR-ALEVADNTEVGCIPGEQVMAAARSLD---LSEVDALVISCA  216 (273)
T ss_dssp             HHHTTCCEEEEEECSCHHHHHHHHHHHHHTTCEEEEEE-ECCCCBHHHHHTCCHHHHHHHHHHSC---CTTCSEEEEESS
T ss_pred             HHHCCCCCEEEECCCCHHHHHHHHHHHHHCCEEEEEEE-EECCCCCCEEECCCHHHHHHHHHHHC---CCCCCEEEEECC
T ss_conf             99649985799747978999999999996782365555-30467774243159999999999852---558986999847


Q ss_pred             -CHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
Q ss_conf             -1145899999996249989999346189999999
Q gi|255764463|r  262 -GLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAA  295 (337)
Q Consensus       262 -a~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a  295 (337)
                       +|+-+|+|.++-+.+++||..=+..-=+.+++.+
T Consensus       217 tnl~t~~ii~~lE~~lG~PVisSNqa~~W~~LR~~  251 (273)
T 2xed_A          217 VQMPSLPLVETAEREFGIPVLSAATAGAYSILRSL  251 (273)
T ss_dssp             SSSCCTTHHHHHHHHHSSCEEEHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHC
T ss_conf             88767789999999879998960899999999986


No 28 
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa PAO1}
Probab=90.49  E-value=0.44  Score=27.06  Aligned_cols=206  Identities=16%  Similarity=0.087  Sum_probs=107.3

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEC--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHH
Q ss_conf             87863288999999999999888936763302--5633455445421576537999999999730144798613327100
Q gi|255764463|r   59 MPDVMRMSIDVAVEKIKQVADLGIPAIAIFPN--IPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFT  136 (337)
Q Consensus        59 MPGv~R~Sid~L~~eie~~~~lGI~av~LFp~--I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT  136 (337)
                      |||+|-----.+      +.+.|.+++++=+.  .-..+--+++..  =+-.-+...++.|.... ++-|+.|.      
T Consensus        25 ~p~v~Da~SAri------~e~aGf~a~~~sg~~~~~s~lG~pD~~~--~t~~e~~~~v~~I~~~~-~~PvivD~------   89 (287)
T 3b8i_A           25 TASVFDPMSARI------AADLGFECGILGGSVASLQVLAAPDFAL--ITLSEFVEQATRIGRVA-RLPVIADA------   89 (287)
T ss_dssp             CEECCSHHHHHH------HHHTTCSCEEECHHHHHHHHHSCCSSSC--SCHHHHHHHHHHHHTTC-SSCEEEEC------
T ss_pred             EECCCCHHHHHH------HHHCCCCEEEHHHHHHHHHCCCCCCCCC--CCHHHHHHHHHHHHCCC-CCCEEECC------
T ss_conf             606768999999------9985999894758999997389998887--87899999998664047-86658526------


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC---------------CCCHHHHHHHHHHHCCCCCCCEE
Q ss_conf             114310013654462899999999999999628973524667---------------67799999999987788577300
Q gi|255764463|r  137 IHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEM---------------MDGRVQEIRKKLDSHGHINVGIM  201 (337)
Q Consensus       137 ~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdM---------------MDGrV~aIR~~Ld~~g~~~~~Im  201 (337)
                              ++|.= |...+.   +....+.++|+.-|-=-|=               ..-.++.||.+++...-.+..|+
T Consensus        90 --------d~Gyg-~~~~~~---~~v~~~~~aGaagi~iED~~~~k~~~~~~~~~~~~~~~~~ki~aa~~a~~~~~~~i~  157 (287)
T 3b8i_A           90 --------DHGYG-NALNVM---RTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTII  157 (287)
T ss_dssp             --------TTCSS-SHHHHH---HHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEE
T ss_pred             --------CCCCC-CCHHHH---HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEE
T ss_conf             --------54444-318999---999999975776678643677555665565555899997778888873034211111


Q ss_pred             CHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEE
Q ss_conf             33666435430101675310244677774431572114788988887664089879955311458999999962499899
Q gi|255764463|r  202 PYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTF  281 (337)
Q Consensus       202 sYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~  281 (337)
                      .-.-                         ++.   ....|||.-+....+-|||++++ |+++..|.|+.+.+..+.|+-
T Consensus       158 aRtd-------------------------a~~---~g~deAI~Ra~ay~eAGAD~ifi-~~~~~~e~i~~i~~~v~~Pl~  208 (287)
T 3b8i_A          158 ARTN-------------------------AEL---IDVDAVIQRTLAYQEAGADGICL-VGVRDFAHLEAIAEHLHIPLM  208 (287)
T ss_dssp             EEEE-------------------------TTT---SCHHHHHHHHHHHHHTTCSEEEE-ECCCSHHHHHHHHTTCCSCEE
T ss_pred             ECCC-------------------------CCC---CCHHHHHHHHHHHHHCCCCEEEE-CCCCCHHHHHHHHHHCCCCEE
T ss_conf             0443-------------------------332---69999999999998639988973-277999999999986699989


Q ss_pred             EEECCHHHH--HHHHHHHCCCC-----C-----HHHHHHHHHHHHHHHCCCE
Q ss_conf             993461899--99999988897-----8-----8999999999997726999
Q gi|255764463|r  282 AYQVSGEYA--MIKAASLQGWI-----N-----KNDAMMESLLAFKRAGCDG  321 (337)
Q Consensus       282 aYqVSGEYa--mi~~a~~~g~~-----d-----~~~~~~E~l~~~kRAGAd~  321 (337)
                      .-. .|---  -..-..+.|.-     .     --+++.|.|..++.++.+.
T Consensus       209 v~~-~g~~~~~~~~eL~~lGv~~v~~g~~~~~aa~~a~~~~l~~~~~~~~~~  259 (287)
T 3b8i_A          209 LVT-YGNPQLRDDARLARLGVRVVVNGHAAYFAAIKATYDCLREERGAVASD  259 (287)
T ss_dssp             EEC-TTCGGGCCHHHHHHTTEEEEECCCHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred             EEC-CCCCCCCCHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             946-899999999999977984999854999999999999999851556767


No 29 
>2hjp_A Phosphonopyruvate hydrolase; phosporus- carbon bond cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=89.75  E-value=0.28  Score=28.36  Aligned_cols=81  Identities=19%  Similarity=0.194  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCC--C-----------HHH
Q ss_conf             478898888766408987995531145899999996249989999346189999999988897--8-----------899
Q gi|255764463|r  239 VQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWI--N-----------KND  305 (337)
Q Consensus       239 ~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~--d-----------~~~  305 (337)
                      ..||+.-+....+-|||+++|-....-.|.|..+.+....|+....+-|++..+.......+.  .           --+
T Consensus       165 ~~eai~Ra~aY~eAGAD~ifv~~~~~~~e~i~~~~~~~~~~v~~~~~~~~~p~l~~~e~~~lgg~~~viy~~~~~raa~~  244 (290)
T 2hjp_A          165 QQEAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIAALSKVGIVIYGNHAIRAAVG  244 (290)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHHTCTTEEEEEECSHHHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHCCCEEEECHHHHHHHHH
T ss_conf             18999999999987999987135559999999998741677479984478886234789988608579866499999999


Q ss_pred             HHHHHHHHHHHHCC
Q ss_conf             99999999977269
Q gi|255764463|r  306 AMMESLLAFKRAGC  319 (337)
Q Consensus       306 ~~~E~l~~~kRAGA  319 (337)
                      ++.+.+..|++.|-
T Consensus       245 a~~~~l~~l~~~G~  258 (290)
T 2hjp_A          245 AVREVFARIRRDGG  258 (290)
T ss_dssp             HHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHCC
T ss_conf             99999999997099


No 30 
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=88.80  E-value=0.7  Score=25.70  Aligned_cols=83  Identities=19%  Similarity=0.252  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHC-CCCEEEEECCHH---HHHHHHHHHCCCC----------CHH
Q ss_conf             47889888876640898799553114589999999624-998999934618---9999999988897----------889
Q gi|255764463|r  239 VQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKF-GLPTFAYQVSGE---YAMIKAASLQGWI----------NKN  304 (337)
Q Consensus       239 ~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~-~~P~~aYqVSGE---Yami~~a~~~g~~----------d~~  304 (337)
                      -.|||+-+....+-|||+++| |+....+-|+.+...+ ..|+.+-.+.|-   +--+.-..+.|+-          ---
T Consensus       177 ~deAI~Ra~aY~~AGAD~ifi-~g~~s~e~i~~~~~~~~~~Pl~~n~~~~g~tp~~s~~eL~~lGv~~v~~~~~~~raa~  255 (307)
T 3lye_A          177 YEECIERLRAARDEGADVGLL-EGFRSKEQAAAAVAALAPWPLLLNSVENGHSPLITVEEAKAMGFRIMIFSFATLAPAY  255 (307)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEE-CCCSCHHHHHHHHHHHTTSCBEEEEETTSSSCCCCHHHHHHHTCSEEEEETTTHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCEEEE-CCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHCCCCEEEECHHHHHHHH
T ss_conf             189999999637639999862-5889999999999862699806423557999887899999779849997659999999


Q ss_pred             HHHHHHHHHHHHHCCCEE
Q ss_conf             999999999977269999
Q gi|255764463|r  305 DAMMESLLAFKRAGCDGI  322 (337)
Q Consensus       305 ~~~~E~l~~~kRAGAd~I  322 (337)
                      +++.+.+..++.-|-.-+
T Consensus       256 ~a~~~~~~~l~~~g~~~~  273 (307)
T 3lye_A          256 AAIRETLVRLRDHGVVGT  273 (307)
T ss_dssp             HHHHHHHHHHHHHSCCCC
T ss_pred             HHHHHHHHHHHHCCCCCC
T ss_conf             999999999997199754


No 31 
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=87.88  E-value=1.6  Score=23.27  Aligned_cols=168  Identities=23%  Similarity=0.299  Sum_probs=88.4

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCC
Q ss_conf             88999999999999888936763302563345544542157653799999999973014479861332710011431001
Q gi|255764463|r   65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGIL  144 (337)
Q Consensus        65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~  144 (337)
                      .+.+..++-++++.. .+..|    .+        |.+-+...|+  +.|+.+++.+|+..++.|.=+            
T Consensus        10 ~~~~~~l~~~~~~~~-~v~~i----Ki--------g~~l~~~~G~--~~i~~l~~~~~~~~i~~D~k~------------   62 (207)
T 3ajx_A           10 LSTEAALELAGKVAE-YVDII----EL--------GTPLIKAEGL--SVITAVKKAHPDKIVFADMKT------------   62 (207)
T ss_dssp             SCHHHHHHHHHHHGG-GCSEE----EE--------CHHHHHHHCT--HHHHHHHHHSTTSEEEEEEEE------------
T ss_pred             CCHHHHHHHHHHHCC-CCCEE----EE--------CHHHHHHCCH--HHHHHHHHHCCCCEEECCCCC------------
T ss_conf             999999999997088-67899----95--------5499885599--999999873799464011212------------


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCC-CHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCC
Q ss_conf             365446289999999999999962897352466767-7999999999877885773003366643543010167531024
Q gi|255764463|r  145 CDGEIVNDETIELISHAAVIQADAGADIIAPSEMMD-GRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRD  223 (337)
Q Consensus       145 ~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMD-GrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p  223 (337)
                          .|+..|+.   +   ..+++|||++--..... ..+.+..++..+.|..-...|..                    
T Consensus        63 ----~di~~t~~---~---~~~~~gad~itvH~~~g~~~l~~~~~~~~~~~~~~~~~l~~--------------------  112 (207)
T 3ajx_A           63 ----MDAGELEA---D---IAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVVVDLIG--------------------  112 (207)
T ss_dssp             ----CSCHHHHH---H---HHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECTT--------------------
T ss_pred             ----CCCCHHHH---H---HHHHHCCCEEEEEHHHCHHHHHHHHHHHHHCCCEEEEEECC--------------------
T ss_conf             ----15976899---9---99981999999855424456999999999729837999358--------------------


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHH-------HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
Q ss_conf             46777744315721147889888876640898799553114-------58999999962499899993461899999999
Q gi|255764463|r  224 LLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLP-------YLDVCFRIKEKFGLPTFAYQVSGEYAMIKAAS  296 (337)
Q Consensus       224 ~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~-------yLDii~~~k~~~~~P~~aYqVSGEYami~~a~  296 (337)
                                  ..+..+...+.   .+-|.|++.+-++..       .++-+..++...+.|+   +|.|         
T Consensus       113 ------------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~g---------  165 (207)
T 3ajx_A          113 ------------IEDKATRAQEV---RALGAKFVEMHAGLDEQAKPGFDLNGLLAAGEKARVPF---SVAG---------  165 (207)
T ss_dssp             ------------CSSHHHHHHHH---HHTTCSEEEEECCHHHHTSTTCCTHHHHHHHHHHTSCE---EEES---------
T ss_pred             ------------CCCHHHHHHHH---HHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCE---EECC---------
T ss_conf             ------------99979999999---97239799980355545456313889999986037767---7897---------


Q ss_pred             HCCCCCHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             8889788999999999997726999982
Q gi|255764463|r  297 LQGWINKNDAMMESLLAFKRAGCDGIFT  324 (337)
Q Consensus       297 ~~g~~d~~~~~~E~l~~~kRAGAd~Iit  324 (337)
                        | +.     .++....+++|||++|-
T Consensus       166 --G-i~-----~~~~~~a~~~GaD~iVv  185 (207)
T 3ajx_A          166 --G-VK-----VATIPAVQKAGAEVAVA  185 (207)
T ss_dssp             --S-CC-----GGGHHHHHHTTCSEEEE
T ss_pred             --C-CC-----CCCHHHHHHCCCCEEEE
T ss_conf             --9-88-----15899999859799998


No 32 
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=87.49  E-value=1.7  Score=23.12  Aligned_cols=55  Identities=18%  Similarity=0.173  Sum_probs=40.6

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf             78632889999999999998889367633025633455445421576537999999999730144
Q gi|255764463|r   60 PDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNI  124 (337)
Q Consensus        60 PGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl  124 (337)
                      +.-|+++.+.++++++.+.+.|++.|.+.++..+.          .....+...++.+++.++.+
T Consensus        79 ~~~~~ls~eeI~~~~~~~~~~G~~~i~l~~g~~~~----------~~~~~~~~~i~~i~~~~~~i  133 (348)
T 3iix_A           79 LKRYRMTPEEIVERARLAVQFGAKTIVLQSGEDPY----------XMPDVISDIVKEIKKMGVAV  133 (348)
T ss_dssp             SCCCBCCHHHHHHHHHHHHHTTCSEEEEEESCCGG----------GTTHHHHHHHHHHHTTSCEE
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCC----------CCHHHHHHHHHHCCCCCEEE
T ss_conf             76615899999999999998199289982588876----------64899999987403332123


No 33 
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=86.93  E-value=1.1  Score=24.44  Aligned_cols=160  Identities=14%  Similarity=0.139  Sum_probs=86.5

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCCCC
Q ss_conf             8899999999999988893676330256334554454215765379999999997301-447986133271001143100
Q gi|255764463|r   65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHDGI  143 (337)
Q Consensus        65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHcGi  143 (337)
                      ...+.+.+.++.+.+.|++.+.+++...+-.       +++.+ =-.+.++...+..+ .+-|+.-|.            
T Consensus        18 iD~~~l~~~i~~li~~Gv~Gi~~~G~tGE~~-------~Ls~~-Er~~l~~~~~~~~~~~~~vi~gv~------------   77 (294)
T 2ehh_A           18 VDYEALGNLIEFHVDNGTDAILVCGTTGESP-------TLTFE-EHEKVIEFAVKRAAGRIKVIAGTG------------   77 (294)
T ss_dssp             ECHHHHHHHHHHHHTTTCCEEEESSTTTTGG-------GSCHH-HHHHHHHHHHHHHTTSSEEEEECC------------
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEECEECCCHH-------HCCHH-HHHHHHHHHHHHCCCCCCEEEEEC------------
T ss_conf             8999999999999975999899785543343-------48999-999999999997389987899817------------


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCCCE---EECCCC---CCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHH
Q ss_conf             13654462899999999999999628973---524667---677999999999877885773003366643543010167
Q gi|255764463|r  144 LCDGEIVNDETIELISHAAVIQADAGADI---IAPSEM---MDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRD  217 (337)
Q Consensus       144 ~~~g~IdND~Tl~~L~k~Al~~A~AGaDi---vAPSdM---MDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRd  217 (337)
                              ..+.+...+.|...+++|||.   +.|.-.   .++-+...|+.-+..   +.+|+-|-....+.       
T Consensus        78 --------~~s~~~~i~~a~~a~~~Gad~i~v~pP~~~~~~~~~~~~~~~~i~~~~---~~pi~lYn~p~~~g-------  139 (294)
T 2ehh_A           78 --------GNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEV---DIPIIIYNIPSRTC-------  139 (294)
T ss_dssp             --------CSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---CSCEEEEECHHHHS-------
T ss_pred             --------CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHC---CCCEEEEECCCCCC-------
T ss_conf             --------845999999999999769999998899999989999999999999713---99789995631048-------


Q ss_pred             HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             531024467777443157211478898888766408987995531145899999996249989999
Q gi|255764463|r  218 AISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAY  283 (337)
Q Consensus       218 A~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aY  283 (337)
                                    +.+++    +.+.+...++   -.++.+|=+.+.++-+.++.+.+.-.+..+
T Consensus       140 --------------~~~~~----~~l~~l~~~~---~nv~giK~~~~d~~~~~~~~~~~~~~~~v~  184 (294)
T 2ehh_A          140 --------------VEISV----DTMFKLASEC---ENIVASKESTPNMDRISEIVKRLGESFSVL  184 (294)
T ss_dssp             --------------CCCCH----HHHHHHHHHC---TTEEEEEECCSCHHHHHHHHHHHCTTSEEE
T ss_pred             --------------CCCCH----HHHHHHHHCC---CCEEEEECCCCCHHHHHHHHHHCCCCEEEE
T ss_conf             --------------76425----7999998435---855999808888899999999759987999


No 34 
>2qiw_A PEP phosphonomutase; NP_600288.1, structural genomics, joint center for structural genomics, JCSG; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=86.78  E-value=1.8  Score=22.86  Aligned_cols=69  Identities=16%  Similarity=0.130  Sum_probs=50.7

Q ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf             14788988887664089879955311458999999962499899993461899999999888978899999999999772
Q gi|255764463|r  238 NVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRA  317 (337)
Q Consensus       238 n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRA  317 (337)
                      ...|||+.+....+-|||++.+ |+++..+.++++.+..+.|+-.-.+.++.        .+.+..        .-+...
T Consensus       166 ~~~eaI~Ra~ay~~AGAd~i~i-e~~~s~e~~~~i~~~v~~Pv~~~~~~~~~--------~~~~~~--------~~l~~l  228 (255)
T 2qiw_A          166 PMVEAIKRIKLMEQAGARSVYP-VGLSTAEQVERLVDAVSVPVNITAHPVDG--------HGAGDL--------ATLAGL  228 (255)
T ss_dssp             HHHHHHHHHHHHHHHTCSEEEE-CCCCSHHHHHHHHTTCSSCBEEECBTTTB--------BTTBCH--------HHHHHT
T ss_pred             HHHHHHHHHHHHHHCCCCEEEE-ECCCCHHHHHHHHHHCCCCEEEEEECCCC--------CCCCCH--------HHHHHC
T ss_conf             1999999999999829978998-37899999999998649986899834788--------999989--------999975


Q ss_pred             CCCEEE
Q ss_conf             699998
Q gi|255764463|r  318 GCDGIF  323 (337)
Q Consensus       318 GAd~Ii  323 (337)
                      |...|+
T Consensus       229 G~~~v~  234 (255)
T 2qiw_A          229 GVRRVT  234 (255)
T ss_dssp             TCCEEE
T ss_pred             CCCEEE
T ss_conf             995999


No 35 
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=86.20  E-value=2  Score=22.66  Aligned_cols=163  Identities=12%  Similarity=0.093  Sum_probs=85.7

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCC
Q ss_conf             328899999999999988893676330256334554454215765379999999997301-4479861332710011431
Q gi|255764463|r   63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHD  141 (337)
Q Consensus        63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHc  141 (337)
                      .....+.+.+.++.+.+.|+..+.+++...+-       .+++.+-- .+.++.+.+..+ .+-||+-|.          
T Consensus        28 g~iD~~~~~~~i~~l~~~Gv~Gl~~~G~tGE~-------~~Ls~eEr-~~l~~~~~~~~~~~~~vi~gv~----------   89 (301)
T 1xky_A           28 GNIDFAKTTKLVNYLIDNGTTAIVVGGTTGES-------PTLTSEEK-VALYRHVVSVVDKRVPVIAGTG----------   89 (301)
T ss_dssp             SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTG-------GGSCHHHH-HHHHHHHHHHHTTSSCEEEECC----------
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEECEECCHH-------HHCCHHHH-HHHHHHHHHHCCCCCCEEEEEC----------
T ss_conf             49499999999999997699989978652206-------55899999-9999999986046787688727----------


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE--CCCC----CCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCH
Q ss_conf             001365446289999999999999962897352--4667----6779999999998778857730033666435430101
Q gi|255764463|r  142 GILCDGEIVNDETIELISHAAVIQADAGADIIA--PSEM----MDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPY  215 (337)
Q Consensus       142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA--PSdM----MDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPF  215 (337)
                            .    .+.+...+.+...+++|+|.+.  |--.    -++-+...|+..+..   +.+|+=|-.-..+      
T Consensus        90 ------~----~s~~~~i~~a~~a~~~Gad~i~v~pP~~~~~~~~~i~~~~~~i~~~~---~~pi~lYn~P~~~------  150 (301)
T 1xky_A           90 ------S----NNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAEST---PLPVMLYNVPGRS------  150 (301)
T ss_dssp             ------C----SCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTC---SSCEEEEECHHHH------
T ss_pred             ------C----HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCC---CCCEEEEECCCCC------
T ss_conf             ------3----66999999999999759999997899789989999999999998518---9978999687633------


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf             6753102446777744315721147889888876640898799553114589999999624998999934
Q gi|255764463|r  216 RDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQV  285 (337)
Q Consensus       216 RdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqV  285 (337)
                                 |    +.+++    |-+++    +.+=-.++.+|-..+-+..+..+.....-.+..|.-
T Consensus       151 -----------g----~~~~~----~~~~~----l~~~pnvvgiK~~~~~~~~~~~~~~~~~~~~~v~~G  197 (301)
T 1xky_A          151 -----------I----VQISV----DTVVR----LSEIENIVAIKDAGGDVLTMTEIIEKTADDFAVYSG  197 (301)
T ss_dssp             -----------S----SCCCH----HHHHH----HHTSTTEEEEEECSSCHHHHHHHHHHSCTTCEEEES
T ss_pred             -----------C----CCCCH----HHHHH----HCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEC
T ss_conf             -----------5----58799----99998----533899899865889778999998634898699968


No 36 
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural genomics of infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=85.26  E-value=2.2  Score=22.36  Aligned_cols=80  Identities=18%  Similarity=0.149  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHH---HHHHHHHHCCCC----------CHHH
Q ss_conf             478898888766408987995531145899999996249989999346189---999999988897----------8899
Q gi|255764463|r  239 VQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEY---AMIKAASLQGWI----------NKND  305 (337)
Q Consensus       239 ~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEY---ami~~a~~~g~~----------d~~~  305 (337)
                      -.|||+-+....+-|||++++ |+..-.+-+..+......|+..-.+-|-.   --+.-..+.|+=          ---+
T Consensus       174 ldeAI~Ra~aY~~AGAD~ifi-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~s~~eL~~~Gv~~i~~~~~~~raa~~  252 (305)
T 3ih1_A          174 LDEAIERANAYVKAGADAIFP-EALQSEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEEFANMGFQMVIYPVTSLRVAAK  252 (305)
T ss_dssp             HHHHHHHHHHHHHHTCSEEEE-TTCCSHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHHHHHTTCSEEEECSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCEEEE-CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCEEEECHHHHHHHHH
T ss_conf             999999999999839989940-7777789999999864998798966889988889999998799899870699999999


Q ss_pred             HHHHHHHHHHHHCC
Q ss_conf             99999999977269
Q gi|255764463|r  306 AMMESLLAFKRAGC  319 (337)
Q Consensus       306 ~~~E~l~~~kRAGA  319 (337)
                      ++.+++..+++.|-
T Consensus       253 a~~~~~~~i~~~G~  266 (305)
T 3ih1_A          253 AYENVFTLIKETGS  266 (305)
T ss_dssp             HHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHCC
T ss_conf             99999999998299


No 37 
>3noe_A DAP-A, dihydrodipicolinate synthase; Lys biosynthesis pathway, lyase; 2.95A {Pseudomonas aeruginosa}
Probab=85.21  E-value=2  Score=22.67  Aligned_cols=111  Identities=14%  Similarity=0.129  Sum_probs=60.3

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCC
Q ss_conf             328899999999999988893676330256334554454215765379999999997301-4479861332710011431
Q gi|255764463|r   63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHD  141 (337)
Q Consensus        63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHc  141 (337)
                      .....+.+.+.++.+.+.|+..+.+.+...+-.     +-+..+-   .+.++...+... ..-||+-|.        | 
T Consensus        17 ~~iD~~~~~~~i~~li~~Gv~gi~i~G~tGE~~-----~Ls~~Er---~~l~~~~~~~~~g~~~vi~gv~--------~-   79 (292)
T 3noe_A           17 GRLDWDSLAKLVDFHLQDGTNAIVAVGTTGESA-----TLDVEEH---IQVVRRVVDQVKGRIPVIAGTG--------A-   79 (292)
T ss_dssp             SCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGG-----GCCHHHH---HHHHHHHHHHHTTSSCEEEECC--------C-
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEECEECCHHH-----HCCHHHH---HHHHHHHHHHHCCCCCEEEECC--------C-
T ss_conf             695999999999999985999899885752266-----6999999---9999999997258886898558--------7-


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE---ECCCC---CCCHHHHHHHHHHHCCCCCCCEECHH
Q ss_conf             00136544628999999999999996289735---24667---67799999999987788577300336
Q gi|255764463|r  142 GILCDGEIVNDETIELISHAAVIQADAGADII---APSEM---MDGRVQEIRKKLDSHGHINVGIMPYV  204 (337)
Q Consensus       142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv---APSdM---MDGrV~aIR~~Ld~~g~~~~~ImsYs  204 (337)
                                 .+.+...+.|-...++|||.|   .|.-.   .|+-+...++.-+..   +.+|+-|-
T Consensus        80 -----------~s~~~~i~~a~~a~~~Gad~v~v~~P~~~~~~~~~i~~~~~~ia~~~---~~pi~~Y~  134 (292)
T 3noe_A           80 -----------NSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAV---AIPQILYN  134 (292)
T ss_dssp             -----------SSHHHHHHHHHHHHTTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHS---CSCEEEEE
T ss_pred             -----------CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHC---CCCEEEEE
T ss_conf             -----------55999999999999849999998899889989999999999999747---99889997


No 38 
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3lb0_A* 3l2i_A* 3nnt_A* 3m7w_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=84.92  E-value=2.3  Score=22.26  Aligned_cols=214  Identities=17%  Similarity=0.227  Sum_probs=110.5

Q ss_pred             HHHHHCCCCCHHHCCCCEEE---ECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf             99863477888773311666---758988110488878632889999999999998889367633025633455445421
Q gi|255764463|r   27 REMVREHRLSVSDLILPIFL---TSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHI  103 (337)
Q Consensus        27 R~Lv~Et~Ls~~dLI~PiFV---~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA  103 (337)
                      -+|-+||..-+++..-|+=|   +=|.+.+.-+-++-|-   +.+.++++++.+...|.-.|=+=  ++ -..+      
T Consensus        11 ~~~~~~~~~~~~~~m~~v~v~~~~~g~g~PkIcVpi~~~---t~~e~l~~a~~~~~~~aDlvE~R--lD-~l~~------   78 (276)
T 3o1n_A           11 VDLGTENLYFQSNAMKTVTVRDLVVGEGAPKIIVSLMGK---TITDVKSEALAYREADFDILEWR--VD-HFAN------   78 (276)
T ss_dssp             --------------CCCEEETTEEETSSSCEEEEEECCS---SHHHHHHHHHHHTTSCCSEEEEE--GG-GCTT------
T ss_pred             CCCCCCCCHHHHCCCCEEEECCEEECCCCCEEEEEECCC---CHHHHHHHHHHHHCCCCCEEEEE--EC-CCCC------
T ss_conf             565644330023167169985789759996899996889---99999999998601799989997--62-3577------


Q ss_pred             CCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC-CCEEECCCCCCCH
Q ss_conf             576537999999999730144798613327100114310013654462899999999999999628-9735246676779
Q gi|255764463|r  104 IDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAG-ADIIAPSEMMDGR  182 (337)
Q Consensus       104 ~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AG-aDivAPSdMMDGr  182 (337)
                      ..+-+-+...++.+++..+++-+|.     .+-+..+-|-.   ..+.++-++.|...    +++| +|+|-----.+-.
T Consensus        79 ~~~~~~~~~~~~~lr~~~~~~PiI~-----T~Rt~~EGG~~---~~~~~~~~~ll~~~----~~~~~~d~IDIEl~~~~~  146 (276)
T 3o1n_A           79 VTTAESVLEAAGAIREIITDKPLLF-----TFRSAKEGGEQ---ALTTGQYIDLNRAA----VDSGLVDMIDLELFTGDD  146 (276)
T ss_dssp             TTCHHHHHHHHHHHHHHCCSSCEEE-----ECCBGGGTCSB---CCCHHHHHHHHHHH----HHHTCCSEEEEEGGGCHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCEEE-----EECCHHHCCCC---CCCHHHHHHHHHHH----HHCCCCCEEEEECCCCHH
T ss_conf             7988999999999997358997899-----97975669998---89999999999999----980899779643126188


Q ss_pred             HHHHHHHHHHCCCCC-CCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HCCCCEEEE-
Q ss_conf             999999998778857-73003366643543010167531024467777443157211478898888766-408987995-
Q gi|255764463|r  183 VQEIRKKLDSHGHIN-VGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDI-QESADMLLV-  259 (337)
Q Consensus       183 V~aIR~~Ld~~g~~~-~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~-~EGAD~lMV-  259 (337)
                        .+++.++...-.+ ..|+||-                   .|.+       .|  ..+.+.+..... .-|||++=+ 
T Consensus       147 --~~~~l~~~a~~~~~~vI~S~H-------------------dF~~-------tP--~~~el~~~~~~m~~~gaDivKiA  196 (276)
T 3o1n_A          147 --EVKATVGYAHQHNVAVIMSNH-------------------DFHK-------TP--AAEEIVQRLRKMQELGADIPKIA  196 (276)
T ss_dssp             --HHHHHHHHHHHTTCEEEEEEE-------------------ESSC-------CC--CHHHHHHHHHHHHHTTCSEEEEE
T ss_pred             --HHHHHHHHHHHCCCEEEEEEC-------------------CCCC-------CC--CHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             --999999987525967999861-------------------4889-------98--99999999999986289989999


Q ss_pred             -CC-----CHHHHHHHHHHHHHC-CCCEEEEEC--CHHHHHHHH
Q ss_conf             -53-----114589999999624-998999934--618999999
Q gi|255764463|r  260 -KP-----GLPYLDVCFRIKEKF-GLPTFAYQV--SGEYAMIKA  294 (337)
Q Consensus       260 -KP-----a~~yLDii~~~k~~~-~~P~~aYqV--SGEYami~~  294 (337)
                       .|     .+..|.....+++.. +.|+.++.-  .|-++-|..
T Consensus       197 ~~~~~~~D~l~ll~~~~~~~~~~~~~PlI~~~MG~~G~~SRi~~  240 (276)
T 3o1n_A          197 VMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVISRLAG  240 (276)
T ss_dssp             ECCSSHHHHHHHHHHHHHHHHHTCCSCCEEEECSGGGTHHHHCH
T ss_pred             EECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHH
T ss_conf             80699889999999999999617899889997898877999979


No 39 
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.20A {Pyrococcus horikoshii OT3}
Probab=84.45  E-value=2.4  Score=22.12  Aligned_cols=176  Identities=17%  Similarity=0.204  Sum_probs=89.7

Q ss_pred             CCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHH
Q ss_conf             53799999999973014479861332710011431001365446289999999999999962897352466767799999
Q gi|255764463|r  107 DNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEI  186 (337)
Q Consensus       107 dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aI  186 (337)
                      ..+++.-.|.+-..+|.+.+ ...|+    .+|-.+|..+.  +-......+.+.+..+.++|+|.|.-...-|-=+.++
T Consensus        20 ~~~~~~~~r~~~~~~p~v~v-~~~~i----pd~p~~I~~~~--~~~~~~p~l~~~~~~le~~g~DaivIaC~t~~~l~~~   92 (228)
T 2eq5_A           20 KEILNLHGRIIESAFPELKV-VSRCI----EDQPKGIYNEE--TEREAEPKIIRLAKEFEREGVDAIIISCAADPAVEKV   92 (228)
T ss_dssp             HHHHTHHHHHHHHHCTTEEE-EEEEC----SSCTTCCSSHH--HHHHHHHHHHHHHHHHHHTTCSEEEECSTTCTTHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCEE-EEECC----CCCCCCCCCHH--HHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
T ss_conf             78899999888754899669-97479----99987677831--5766379999999999877998999906875999999


Q ss_pred             HHHHH---------------HCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HH
Q ss_conf             99998---------------778857730033666435430101675310244677774431572114788988887-66
Q gi|255764463|r  187 RKKLD---------------SHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASI-DI  250 (337)
Q Consensus       187 R~~Ld---------------~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~-D~  250 (337)
                      |+.++               ..| ...+|+.+.......++.-.++.........+--..-+.+.....+.+++... =.
T Consensus        93 r~~~~iPVig~~ea~~~~a~~~g-~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~  171 (228)
T 2eq5_A           93 RKLLSIPVIGAGSSVSALALAYG-RRVGVLNLTEETPKVIRSILGNNLIAEDHPSGVSNTLDLLTDWGRREVINAAKRLK  171 (228)
T ss_dssp             HHHCSSCEEEHHHHHHHHHHTTC-SSEEEECSSSCCCHHHHHHHGGGEEEEECCTTCCSGGGGGSHHHHHHHHHHHHHHH
T ss_pred             HHHCCCCEECCHHHHHHHHHHHC-CCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf             98659985563188999999838-87447523300389999999873446655531342111246789999999999998


Q ss_pred             HCCCCEEEEC-CCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Q ss_conf             4089879955-3114589999999624998999934618999999
Q gi|255764463|r  251 QESADMLLVK-PGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKA  294 (337)
Q Consensus       251 ~EGAD~lMVK-Pa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~  294 (337)
                      ++|||.+..= -+++++.....+.+.+.+||    +.+=-++++.
T Consensus       172 ~~gadaiiLGCT~~~~~~~~~~l~~~~gvpV----IDp~~a~~~~  212 (228)
T 2eq5_A          172 EKGVEVIALGCTGMSTIGIAPVLEEEVGIPV----IDPVIASGAV  212 (228)
T ss_dssp             HTTCSEEEECCTHHHHHTCHHHHHHHHSSCE----ECHHHHHHHH
T ss_pred             HCCCCEEEECCCCCHHHHHHHHHHCCCCCEE----ECCHHHHHHH
T ss_conf             6699889981787024555798730699779----8669999999


No 40 
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, JCSG, PSI, protein structure initiative; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1
Probab=83.95  E-value=2.1  Score=22.41  Aligned_cols=115  Identities=11%  Similarity=0.154  Sum_probs=61.9

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCCC
Q ss_conf             28899999999999988893676330256334554454215765379999999997301-44798613327100114310
Q gi|255764463|r   64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHDG  142 (337)
Q Consensus        64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHcG  142 (337)
                      ....+.+.+.++.+++.|++.|.+++...+..       +++.+- -.+.++...+..+ .+-||+-|.           
T Consensus        29 ~iD~~~~~~~i~~li~~Gv~gi~~~G~tGE~~-------~Ls~~E-r~~l~~~~~~~~~~~~~vi~gv~-----------   89 (306)
T 1o5k_A           29 ELDLESYERLVRYQLENGVNALIVLGTTGESP-------TVNEDE-REKLVSRTLEIVDGKIPVIVGAG-----------   89 (306)
T ss_dssp             EECHHHHHHHHHHHHHTTCCEEEESSGGGTGG-------GCCHHH-HHHHHHHHHHHHTTSSCEEEECC-----------
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEECEEHHHHH-------HCCHHH-HHHHHHHHHHHCCCCCCEEEECC-----------
T ss_conf             78999999999999976999899682134255-------589999-99999999985488888898468-----------


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE--ECCCC----CCCHHHHHHHHHHHCCCCCCCEECHHHHHHH
Q ss_conf             0136544628999999999999996289735--24667----6779999999998778857730033666435
Q gi|255764463|r  143 ILCDGEIVNDETIELISHAAVIQADAGADII--APSEM----MDGRVQEIRKKLDSHGHINVGIMPYVAKFNS  209 (337)
Q Consensus       143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv--APSdM----MDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS  209 (337)
                           .-    +.+.-.+.|...+++|||.|  .|--.    .|+-+..-++.-+.   .+.+|+-|-.-..+
T Consensus        90 -----~~----~~~~ai~~a~~a~~~Gad~v~v~pP~~~~~~~~~i~~~~~~ia~a---~~~pi~iYn~p~~~  150 (306)
T 1o5k_A           90 -----TN----STEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISER---TDLGIVVYNVPGRT  150 (306)
T ss_dssp             -----CS----CHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTT---CSSCEEEEECHHHH
T ss_pred             -----CC----CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH---CCCCEEEEECCCCC
T ss_conf             -----65----499999999999956999999859999997999999999999982---79988999788514


No 41 
>3js3_A 3-dehydroquinate dehydratase; AROD, covalent reaction intermediate, amino-acid biosynthesis, aromatic amino acid biosynthesis, lyase; HET: DHS; 2.20A {Clostridium difficile 630}
Probab=83.21  E-value=2.7  Score=21.79  Aligned_cols=170  Identities=15%  Similarity=0.150  Sum_probs=82.6

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCC
Q ss_conf             88999999999999888936763302563345544542157653799999999973014479861332710011431001
Q gi|255764463|r   65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGIL  144 (337)
Q Consensus        65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~  144 (337)
                      -+.+.++++++.+...|...|=+=  ++ -..+.      .+-.-+...++.+++.++++-+|.-     +-+..+-|-.
T Consensus        29 ~t~~e~l~~~~~~~~~~aD~vElR--lD-~l~~~------~~~~~i~~~l~~l~~~~~~~PiI~T-----~R~~~eGG~~   94 (258)
T 3js3_A           29 KNKKDIIKEAKELKDACLDIIEWR--VD-FFENV------ENIKEVKEVLYELRSYIHDIPLLFT-----FRSVVEGGEK   94 (258)
T ss_dssp             SSHHHHHHHHHHHTTSSCSEEEEE--GG-GCTTT------TCHHHHHHHHHHHHHHHTTSCEEEE-----CCCGGGTCSC
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEEE--EE-CCCCC------CCHHHHHHHHHHHHHHCCCCCEEEE-----ECCCCCCCCC
T ss_conf             998999999998734599989998--60-36676------8899999999999973589978999-----6561028988


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCC-CCEEECCCCCCCH-HHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCC
Q ss_conf             3654462899999999999999628-9735246676779-9999999987788577300336664354301016753102
Q gi|255764463|r  145 CDGEIVNDETIELISHAAVIQADAG-ADIIAPSEMMDGR-VQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTR  222 (337)
Q Consensus       145 ~~g~IdND~Tl~~L~k~Al~~A~AG-aDivAPSdMMDGr-V~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~  222 (337)
                         ..+.++-++.|.+.    +.+| +|+|-=---++-. ...+.+.....  .-..|+||-                  
T Consensus        95 ---~~~~~~~~~ll~~~----~~~~~~d~iDiE~~~~~~~~~~l~~~a~~~--~~~vI~S~H------------------  147 (258)
T 3js3_A           95 ---LISRDYYTTLNKEI----SNTGLVDLIDVELFMGDEVIDEVVNFAHKK--EVKVIISNH------------------  147 (258)
T ss_dssp             ---CCCHHHHHHHHHHH----HHTSCCSEEEEEGGGCHHHHHHHHHHHHHT--TCEEEEEEE------------------
T ss_pred             ---CCCHHHHHHHHHHH----HHCCCCCHHHHHHHCCHHHHHHHHHHHHHC--CCEEEEEEE------------------
T ss_conf             ---89999999999999----980894146888755199999999886616--976999994------------------


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHH-HCCCCEEEEC-CC------HHHHHHHHHHHHH-CCCCEEEEEC
Q ss_conf             4467777443157211478898888766-4089879955-31------1458999999962-4998999934
Q gi|255764463|r  223 DLLKGDKKTYYLDPANVQEAIREASIDI-QESADMLLVK-PG------LPYLDVCFRIKEK-FGLPTFAYQV  285 (337)
Q Consensus       223 p~~~gdr~sYQmd~~n~~eA~~e~~~D~-~EGAD~lMVK-Pa------~~yLDii~~~k~~-~~~P~~aYqV  285 (337)
                       .|.+       .|  ..+.+.+...+. .-|||++=+= .+      +..|......+.. .+.|+.++.-
T Consensus       148 -~f~~-------tp--~~~~l~~~~~~~~~~gaDivKia~~~~~~~D~l~ll~~~~~~~~~~~~~p~I~~~M  209 (258)
T 3js3_A          148 -DFNK-------TP--KKEEIVSRLCRMQELGADLPKIAVMPQNEKDVLVLLEATNEMFKIYADRPIITMSM  209 (258)
T ss_dssp             -ESSC-------CC--CHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHTTCSSCBEEEEC
T ss_pred             -CCCC-------CC--CHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEC
T ss_conf             -4899-------98--89999999999997489869999822988999999999999986268998899966


No 42 
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=83.09  E-value=2.6  Score=21.80  Aligned_cols=117  Identities=17%  Similarity=0.204  Sum_probs=69.6

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEECCCCCHHHCCCCCC
Q ss_conf             2889999999999998889367633025633455445421576537999999999730-144798613327100114310
Q gi|255764463|r   64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI-PNIGIITDVALDPFTIHGHDG  142 (337)
Q Consensus        64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f-pdl~vi~DVcLc~YT~hGHcG  142 (337)
                      ....+.+.+.++.+.+.|+.++.+++...+-.       +++.+ =-.+.++...+.. +.+-|++-+.-          
T Consensus        17 ~iD~~~~~~~i~~~~~~Gv~gi~~~G~tgE~~-------~Ls~~-Er~~l~~~~~~~~~~r~~vi~g~~~----------   78 (289)
T 2yxg_A           17 EVDFDGLEENINFLIENGVSGIVAVGTTGESP-------TLSHE-EHKKVIEKVVDVVNGRVQVIAGAGS----------   78 (289)
T ss_dssp             EECHHHHHHHHHHHHHTTCSEEEESSTTTTGG-------GSCHH-HHHHHHHHHHHHHTTSSEEEEECCC----------
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEECEECCCHH-------HCCHH-HHHHHHHHHHHHHCCCCCEEEECCC----------
T ss_conf             78999999999999976999899784430354-------48999-9999999999982899608973687----------


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE---ECCCC---CCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHH
Q ss_conf             0136544628999999999999996289735---24667---677999999999877885773003366643543
Q gi|255764463|r  143 ILCDGEIVNDETIELISHAAVIQADAGADII---APSEM---MDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSF  211 (337)
Q Consensus       143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv---APSdM---MDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~f  211 (337)
                                .+.+...+.|....++|||.|   .|.--   -|+-+...+...|..   +.+||=|-....+..
T Consensus        79 ----------~s~~~ai~~a~~a~~~Gad~v~v~~P~~~~~~~~~i~~~~~~ia~~~---~~pi~iy~~p~~~~~  140 (289)
T 2yxg_A           79 ----------NCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESI---NLPIVLYNVPSRTAV  140 (289)
T ss_dssp             ----------SSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---SSCEEEEECHHHHSC
T ss_pred             ----------CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCC---CCCEEEEECCCCCCC
T ss_conf             ----------45999999999999779999998898788999999999999999647---998899978863454


No 43 
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=82.85  E-value=1.9  Score=22.78  Aligned_cols=66  Identities=23%  Similarity=0.264  Sum_probs=49.2

Q ss_pred             CEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf             81104888786328899999999999988893676330256334554-454215765379999999997301447986
Q gi|255764463|r   52 TVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNN-TGSHIIDPDNLINEGICAIKKNIPNIGIIT  128 (337)
Q Consensus        52 ~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~-~GseA~n~dglv~rAIr~IK~~fpdl~vi~  128 (337)
                      .|..-|.+|    ++.|++.+++.+|++.|-..|=+.+      +|+ +|...++++ ...+++..|++..|.|+..+
T Consensus        20 tk~~~P~lP----~TpeEia~~a~~c~~AGAsivH~H~------Rd~~dG~~s~d~~-~y~~ii~~IR~~~~~iv~~t   86 (311)
T 3e02_A           20 TPTMSPYLP----ITPEEIVKEGVAAAEAGAAMLHLHA------RDPLNGRPSQDPD-LFMRFLPQLKERTDAILNIT   86 (311)
T ss_dssp             CGGGCTTSC----CSHHHHHHHHHHHHHHTCSEEEECE------ECTTTCCEECCHH-HHTTTHHHHHHHCCCEEEEC
T ss_pred             CCCCCCCCC----CCHHHHHHHHHHHHHHCCCEEEEEE------CCCCCCCCCCCHH-HHHHHHHHHHHHCCCEEEEE
T ss_conf             702299998----9999999999999982673899885------3799989477999-99999999997499369873


No 44 
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomerase; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=82.71  E-value=2.8  Score=21.66  Aligned_cols=131  Identities=18%  Similarity=0.188  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCC--------CCC
Q ss_conf             799999999973014479861332710011431001365446289999999999999962897352466--------767
Q gi|255764463|r  109 LINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSE--------MMD  180 (337)
Q Consensus       109 lv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSd--------MMD  180 (337)
                      -+...++.|.... ++-|+.|.         -.|.   |   |...+...+   -.+++||+.-|-=-|        -++
T Consensus        66 e~~~~~~~I~~~~-~iPv~vD~---------d~Gy---G---~~~~v~~tv---~~~~~aG~agi~iEDq~~pk~~~~~~  126 (295)
T 1s2w_A           66 QVVEVLEFMSDAS-DVPILLDA---------DTGY---G---NFNNARRLV---RKLEDRGVAGACLEDKLFPKTNSLHD  126 (295)
T ss_dssp             HHHHHHHHHHHTC-SSCEEEEC---------CSSC---S---SHHHHHHHH---HHHHHTTCCEEEEECBCC--------
T ss_pred             HHHHHHHHHHHCC-CCCEEEEC---------CCCC---C---CCHHHHHHH---HHHHHHHCCEEEEECCCCCCCCCCCC
T ss_conf             9999998774025-77503523---------4343---4---411799999---99998423124651321455555333


Q ss_pred             C----------HHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             7----------999999999877885773003366643543010167531024467777443157211478898888766
Q gi|255764463|r  181 G----------RVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDI  250 (337)
Q Consensus       181 G----------rV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~  250 (337)
                      |          .+..||.+.+...-.+..|..-+--|.                 .+         ....|||+-+....
T Consensus       127 ~~~~~~~~~~e~~~ki~aa~~a~~~~d~~i~ARtda~~-----------------~~---------~gl~eAi~Ra~aY~  180 (295)
T 1s2w_A          127 GRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFI-----------------AG---------WGLDEALKRAEAYR  180 (295)
T ss_dssp             CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTT-----------------TT---------CCHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHCCC-----------------CC---------CCHHHHHHHHHHHH
T ss_conf             44445457999999988777632686315753111024-----------------58---------99999999999998


Q ss_pred             HCCCCEEEECCCHHHHHHHHHHHHHCC--CCEEEEE
Q ss_conf             408987995531145899999996249--9899993
Q gi|255764463|r  251 QESADMLLVKPGLPYLDVCFRIKEKFG--LPTFAYQ  284 (337)
Q Consensus       251 ~EGAD~lMVKPa~~yLDii~~~k~~~~--~P~~aYq  284 (337)
                      +-|||+++|-...+..+.+..+.....  +|+.+-.
T Consensus       181 eAGAD~ifv~~~~~~~e~~~~~~~~~~~~~p~~~~~  216 (295)
T 1s2w_A          181 NAGADAILMHSKKADPSDIEAFMKAWNNQGPVVIVP  216 (295)
T ss_dssp             HTTCSEEEECCCSSSSHHHHHHHHHHTTCSCEEECC
T ss_pred             HCCCCEEEECCCCCCHHHHHHHHHHCCCCHHEEEEC
T ss_conf             369975760355675888999886214542203321


No 45 
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, , PSI-2, protein structure initiative; 1.80A {Bacillus clausii ksm-k16}
Probab=82.13  E-value=2.3  Score=22.23  Aligned_cols=109  Identities=15%  Similarity=0.163  Sum_probs=61.6

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCC
Q ss_conf             328899999999999988893676330256334554454215765379999999997301-4479861332710011431
Q gi|255764463|r   63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHD  141 (337)
Q Consensus        63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHc  141 (337)
                      .....+.+.+.++.+.+.|++.+.+++...+-.     +-+.++   -.+.++...+... .+.|++=++  ..|     
T Consensus        28 g~ID~~~l~~~i~~l~~~Gv~Gi~~~GstGE~~-----~Ls~~E---r~~l~~~~~~~~~~~~~vi~g~~--~st-----   92 (316)
T 3e96_A           28 GSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFY-----ALSLEE---AKEEVRRTVEYVHGRALVVAGIG--YAT-----   92 (316)
T ss_dssp             CCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGG-----GSCHHH---HHHHHHHHHHHHTTSSEEEEEEC--SSH-----
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEECEECCCHH-----HCCHHH---HHHHHHHHHHHHCCCCEEEECCC--CCH-----
T ss_conf             789999999999999975999899685623454-----589999---99999999998089842883565--448-----


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE---ECCCC---CCCHHHHHHHHHHHCCCCCCCEECH
Q ss_conf             00136544628999999999999996289735---24667---6779999999998778857730033
Q gi|255764463|r  142 GILCDGEIVNDETIELISHAAVIQADAGADII---APSEM---MDGRVQEIRKKLDSHGHINVGIMPY  203 (337)
Q Consensus       142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv---APSdM---MDGrV~aIR~~Ld~~g~~~~~ImsY  203 (337)
                                .++    .++|-..+++|+|.|   .|.-.   -|+-+...++..++.   +.+|+-|
T Consensus        93 ----------~~~----i~~a~~a~~~Gad~i~v~pP~~~~~~~~~i~~~f~~ia~a~---~lpiiiY  143 (316)
T 3e96_A           93 ----------STA----IELGNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEAL---DFPSLVY  143 (316)
T ss_dssp             ----------HHH----HHHHHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHH---TSCEEEE
T ss_pred             ----------HHH----HHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH---CCCCEEC
T ss_conf             ----------999----99998999759999983587567899899999999999983---6870100


No 46 
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=81.65  E-value=3  Score=21.40  Aligned_cols=160  Identities=17%  Similarity=0.156  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHH
Q ss_conf             79999999997301447986133271001143100136544628999999999999996289735246676779999999
Q gi|255764463|r  109 LINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRK  188 (337)
Q Consensus       109 lv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~  188 (337)
                      -+..+++.+...-+|.+++.  |--.-...|.            .....+.+.  ..+..|.-++.|+       .++.+
T Consensus        54 ~l~~aa~~l~~~~~d~I~~g--CTs~s~~~G~------------~~~~~~~~~--i~~~~g~pv~t~~-------~A~~~  110 (240)
T 3ixl_A           54 SVVDHARRLQKQGAAVVSLM--CTSLSFYRGA------------AFNAALTVA--MREATGLPCTTMS-------TAVLN  110 (240)
T ss_dssp             GHHHHHHHHHHTTEEEEEEC--CHHHHHTTCH------------HHHHHHHHH--HHHHHSSCEEEHH-------HHHHH
T ss_pred             HHHHHHHHHCCCCCCEEEEC--CCHHHHHCCC------------HHHHHHHHH--HHHCCCCCEECHH-------HHHHH
T ss_conf             99999998525799999976--8689995271------------679999998--8745799610679-------99999


Q ss_pred             HHHHCCCCCCCEEC-HHHHHHHHHHCCHHHHH---HCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE-EEECC
Q ss_conf             99877885773003-36664354301016753---102446--7777443157211478898888766408987-99553
Q gi|255764463|r  189 KLDSHGHINVGIMP-YVAKFNSSFYGPYRDAI---STRDLL--KGDKKTYYLDPANVQEAIREASIDIQESADM-LLVKP  261 (337)
Q Consensus       189 ~Ld~~g~~~~~Ims-YsaKfaS~fYgPFRdA~---~S~p~~--~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~-lMVKP  261 (337)
                      +|..-|...+.+.+ |..--.-....-|.+.-   .+...|  .++..-...++....++.++...|. .++|. ++.=-
T Consensus       111 Al~~lg~krIav~tPY~~~~~~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pd~daI~iscT  189 (240)
T 3ixl_A          111 GLRALGVRRVALATAYIDDVNERLAAFLAEESLVPTGCRSLGITGVEAMARVDTATLVDLCVRAFEAA-PDSDGILLSSG  189 (240)
T ss_dssp             HHHHTTCSEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEECCCCCHHHHHTCCHHHHHHHHHHHHHTS-TTCSEEEEECT
T ss_pred             HHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEECHHHHHHHHHHHHHCC-CCCCEEEEECC
T ss_conf             99980998645436764899999999999739862322355677665332347877999999987338-88768998578


Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
Q ss_conf             11458999999962499899993461899999999
Q gi|255764463|r  262 GLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAAS  296 (337)
Q Consensus       262 a~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~  296 (337)
                      +|+.+++|.++.+.+++||.    |--.++++++-
T Consensus       190 ~~~t~~~i~~lE~~lg~PVi----ssn~a~~W~~L  220 (240)
T 3ixl_A          190 GLLTLDAIPEVERRLGVPVV----SSSPAGFWDAV  220 (240)
T ss_dssp             TSCCTTHHHHHHHHHSSCEE----EHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHCCCEE----EHHHHHHHHHH
T ss_conf             86188999999999898999----72999999999


No 47 
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefaciens STR. C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=80.42  E-value=3.3  Score=21.13  Aligned_cols=135  Identities=12%  Similarity=0.125  Sum_probs=75.2

Q ss_pred             HCCCCCHHHC--CCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             3477888773--31166675898811048887863288999999999999888936763302563345544542157653
Q gi|255764463|r   31 REHRLSVSDL--ILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDN  108 (337)
Q Consensus        31 ~Et~Ls~~dL--I~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dg  108 (337)
                      +|+..+ ..|  |+|..++.=. .         -.+...+.+.+.++.+.+.|++.|.+++...+.       .+++.+ 
T Consensus        27 ~~~~m~-~~~~Gv~~~~~TPF~-~---------dg~ID~~~l~~~i~~li~~Gv~Gi~v~GstGE~-------~~Lt~~-   87 (332)
T 2r8w_A           27 RETDMA-TRFKGLSAFPITPAD-E---------AGRVDIEAFSALIARLDAAEVDSVGILGSTGIY-------MYLTRE-   87 (332)
T ss_dssp             ---CGG-GGGCEEEECCCCCBC-T---------TCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTG-------GGSCHH-
T ss_pred             CCCCCH-HCCCEEEEEEECCCC-C---------CCCCCHHHHHHHHHHHHHCCCCEEEECEECCCH-------HHCCHH-
T ss_conf             247501-126556785626668-8---------758599999999999997799999978214344-------248999-


Q ss_pred             HHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE---ECCCCC---CC
Q ss_conf             79999999997301-447986133271001143100136544628999999999999996289735---246676---77
Q gi|255764463|r  109 LINEGICAIKKNIP-NIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADII---APSEMM---DG  181 (337)
Q Consensus       109 lv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv---APSdMM---DG  181 (337)
                      =-.+.++...+..+ .+-|++-|.        +            .+.+.-.++|....++|||.|   .|.---   |+
T Consensus        88 Er~~l~~~~~~~~~gr~pvi~gv~--------~------------~s~~~ai~~ak~a~~~Gad~v~v~~P~~~~~~~~~  147 (332)
T 2r8w_A           88 ERRRAIEAAATILRGRRTLMAGIG--------A------------LRTDEAVALAKDAEAAGADALLLAPVSYTPLTQEE  147 (332)
T ss_dssp             HHHHHHHHHHHHHTTSSEEEEEEC--------C------------SSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCHHH
T ss_pred             HHHHHHHHHHHHHCCCCEEEEECC--------C------------CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHH
T ss_conf             999999999998389972999468--------6------------77899999998886569986996586346555589


Q ss_pred             HHHHHHHHHHHCCCCCCCEECHHHHH
Q ss_conf             99999999987788577300336664
Q gi|255764463|r  182 RVQEIRKKLDSHGHINVGIMPYVAKF  207 (337)
Q Consensus       182 rV~aIR~~Ld~~g~~~~~ImsYsaKf  207 (337)
                      .+..-++..+.   .+.+|+-|-...
T Consensus       148 i~~~f~~ia~~---~~~PiiiYn~P~  170 (332)
T 2r8w_A          148 AYHHFAAVAGA---TALPLAIYNNPT  170 (332)
T ss_dssp             HHHHHHHHHHH---CSSCEEEECCHH
T ss_pred             HHHHHHHHHHH---CCCEEEEEECCC
T ss_conf             99999999860---364389981565


No 48 
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural genomics, joint center for structural genomics, JCSG; 2.18A {Thermotoga maritima MSB8} SCOP: c.1.5.1
Probab=80.26  E-value=3.4  Score=21.09  Aligned_cols=94  Identities=17%  Similarity=0.308  Sum_probs=43.9

Q ss_pred             HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCC
Q ss_conf             99999999888936763302563345544542157653799999999973014479861332710011431001365446
Q gi|255764463|r   71 VEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIV  150 (337)
Q Consensus        71 ~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~Id  150 (337)
                      .+.++.+++.|+..|.+    +-.       +.+  .-.+.++++.||+.||++-||+--|..                 
T Consensus       239 ~eRa~~Lv~aGvD~ivI----D~A-------hgh--s~~~~~~i~~ik~~~~~~~viaGnv~t-----------------  288 (494)
T 1vrd_A          239 MERVEKLVKAGVDVIVI----DTA-------HGH--SRRVIETLEMIKADYPDLPVVAGNVAT-----------------  288 (494)
T ss_dssp             HHHHHHHHHTTCSEEEE----CCS-------CCS--SHHHHHHHHHHHHHCTTSCEEEEEECS-----------------
T ss_pred             HHHHHHHHHCCCCEEEE----ECC-------CCC--HHHHHHHHHHHHHHCCCCCEEEEEECC-----------------
T ss_conf             89999999769989999----546-------643--799999999999868998679753242-----------------


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCEE----ECCCCC---------CCHHHHHHHHHHHCCCCCCCEEC
Q ss_conf             28999999999999996289735----246676---------77999999999877885773003
Q gi|255764463|r  151 NDETIELISHAAVIQADAGADII----APSEMM---------DGRVQEIRKKLDSHGHINVGIMP  202 (337)
Q Consensus       151 ND~Tl~~L~k~Al~~A~AGaDiv----APSdMM---------DGrV~aIR~~Ld~~g~~~~~Ims  202 (337)
                              .+.|..+.+||||.|    +|-.+-         -.+..+|++..+.....+++|++
T Consensus       289 --------~~~a~~L~~aGad~i~VGiG~Gs~CtTr~~~g~g~pq~sav~~~~~~~~~~~v~iiA  345 (494)
T 1vrd_A          289 --------PEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIA  345 (494)
T ss_dssp             --------HHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEE
T ss_pred             --------HHHHHHHHHHCCCEEEECCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCEEEE
T ss_conf             --------999999998398888854117866226230044621788999999998655966993


No 49 
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 2abb_A* 1vys_X* 1vyp_X*
Probab=80.26  E-value=3.4  Score=21.09  Aligned_cols=168  Identities=13%  Similarity=0.084  Sum_probs=94.0

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEEC-----------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCC-H
Q ss_conf             999999999999888936763302-----------5633455445421576537999999999730144798613327-1
Q gi|255764463|r   67 IDVAVEKIKQVADLGIPAIAIFPN-----------IPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALD-P  134 (337)
Q Consensus        67 id~L~~eie~~~~lGI~av~LFp~-----------I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc-~  134 (337)
                      ++.-.+.++.+.+.|.-.|-|...           .-+.-+|+.|-.--|---++...|++||+.+|+-.|..-+... .
T Consensus       160 i~~f~~AA~rA~~AGfDgVEIH~aHGYLl~qFlSp~~N~RtDeYGGsleNR~Rf~~Eii~aIR~~~g~d~i~~~~~~~~~  239 (364)
T 1vyr_A          160 VNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGT  239 (364)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSC
T ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCCEEHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
T ss_conf             99999999999983988678502762005333377578998888998899999999999999987086655778850323


Q ss_pred             HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCC
Q ss_conf             00114310013654462899999999999999628973524667677999999999877885773003366643543010
Q gi|255764463|r  135 FTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGP  214 (337)
Q Consensus       135 YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgP  214 (337)
                      +.+      +.++-.    +.+...+++-.+.++|.|.+--|..-               +      +....|...|...
T Consensus       240 ~~~------~~~g~~----~~~e~~~~~~~l~~~g~d~~~~s~~~---------------~------~~~~~~~~~~~~~  288 (364)
T 1vyr_A          240 FQN------VDNGPN----EEADALYLIEELAKRGIAYLHMSETD---------------L------AGGKPYSEAFRQK  288 (364)
T ss_dssp             BTT------BCCCTT----HHHHHHHHHHHHHHTTCSEEEEECCB---------------T------TBCCCCCHHHHHH
T ss_pred             CCC------CCCCCC----CHHHHHHHHHHHHHCCCEEEEECCCC---------------C------CCCCCCHHHHHHH
T ss_conf             244------323675----07999999999986598499941477---------------7------7787630999999


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCEE-EECCCHHHHHHHHHHHHHCC
Q ss_conf             167531024467777443157211478898888766408-9879-95531145899999996249
Q gi|255764463|r  215 YRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQES-ADML-LVKPGLPYLDVCFRIKEKFG  277 (337)
Q Consensus       215 FRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EG-AD~l-MVKPa~~yLDii~~~k~~~~  277 (337)
                      .|++++ .|-..+.+    +++.       .++.-++|| ||+| |-.|-+.-=|.++++++.-.
T Consensus       289 i~~~~~-~~vi~~g~----~t~~-------~ae~~l~~G~aDlV~~gR~liadPd~~~K~~~g~~  341 (364)
T 1vyr_A          289 VRERFH-GVIIGAGA----YTAE-------KAEDLIGKGLIDAVAFGRDYIANPDLVARLQKKAE  341 (364)
T ss_dssp             HHHHCC-SEEEEESS----CCHH-------HHHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCC
T ss_pred             HHHHCC-CEEEECCC----CCHH-------HHHHHHHCCCCCEEHHHHHHHHCCHHHHHHHHCCC
T ss_conf             999738-61996689----9999-------99999987997456553898869499999980899


No 50 
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=79.82  E-value=3.2  Score=21.22  Aligned_cols=27  Identities=15%  Similarity=0.185  Sum_probs=14.9

Q ss_pred             CCCHHHHHHHHHHH-HHCCCCEEEE-EEC
Q ss_conf             28899999999999-9888936763-302
Q gi|255764463|r   64 RMSIDVAVEKIKQV-ADLGIPAIAI-FPN   90 (337)
Q Consensus        64 R~Sid~L~~eie~~-~~lGI~av~L-Fp~   90 (337)
                      +++.+..++-++.+ -++||..|=+ ||.
T Consensus        37 ~fs~e~k~~i~~~lL~~~Gv~~IEvG~~~   65 (337)
T 3ble_A           37 SFSTSEKLNIAKFLLQKLNVDRVEIASAR   65 (337)
T ss_dssp             CCCHHHHHHHHHHHHHTTCCSEEEEEETT
T ss_pred             CCCHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf             98999999999999998497989978876


No 51 
>1xxx_A DHDPS, dihydrodipicolinate synthase; DAPA, RV2753C, lysine biosynthesis, structural genomics, PSI protein structure initiative; 2.28A {Mycobacterium tuberculosis} SCOP: c.1.10.1
Probab=79.71  E-value=3.5  Score=20.98  Aligned_cols=141  Identities=13%  Similarity=0.055  Sum_probs=74.7

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEECCCCCHHHCCCCC
Q ss_conf             32889999999999998889367633025633455445421576537999999999730-14479861332710011431
Q gi|255764463|r   63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI-PNIGIITDVALDPFTIHGHD  141 (337)
Q Consensus        63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f-pdl~vi~DVcLc~YT~hGHc  141 (337)
                      .+...+.+.+.++.+.+.|+.++.+++...+-..     -..++-   .+.++...+.. +...|++-|        |+ 
T Consensus        30 g~iD~~~l~~~i~~l~~~Gv~Gi~v~G~tGE~~~-----Ls~~Er---~~l~~~~~~~~~~~~~vi~gv--------~~-   92 (303)
T 1xxx_A           30 GSLDTATAARLANHLVDQGCDGLVVSGTTGESPT-----TTDGEK---IELLRAVLEAVGDRARVIAGA--------GT-   92 (303)
T ss_dssp             SCBCHHHHHHHHHHHHHTTCSEEEESSTTTTTTT-----SCHHHH---HHHHHHHHHHHTTTSEEEEEC--------CC-
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHH-----CCHHHH---HHHHHHHHHHHCCCCCEEEEC--------CC-
T ss_conf             6919999999999999779998997813465776-----879999---999999999928987489845--------76-


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE---ECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHH-HCC-HH
Q ss_conf             00136544628999999999999996289735---24667677999999999877885773003366643543-010-16
Q gi|255764463|r  142 GILCDGEIVNDETIELISHAAVIQADAGADII---APSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSF-YGP-YR  216 (337)
Q Consensus       142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv---APSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~f-YgP-FR  216 (337)
                                 .+.+.-.+.|....++|+|.|   .|.-.--..-..++-.-+-....+.+|+=|-....+.+ +.| +.
T Consensus        93 -----------~s~~~~i~~a~~a~~~Gad~i~v~~P~~~~~~~~~i~~~~~~ia~~~~~pi~iyn~P~~~g~~~s~~~~  161 (303)
T 1xxx_A           93 -----------YDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTI  161 (303)
T ss_dssp             -----------SCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSSCCCHHHH
T ss_pred             -----------CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHH
T ss_conf             -----------668999999999997169869994575789899999999999997169988999787535777698999


Q ss_pred             HHHHCCCCCCCCCCC
Q ss_conf             753102446777744
Q gi|255764463|r  217 DAISTRDLLKGDKKT  231 (337)
Q Consensus       217 dA~~S~p~~~gdr~s  231 (337)
                      ..+...|.+.|=|.+
T Consensus       162 ~~L~~~~~v~giK~s  176 (303)
T 1xxx_A          162 RALASHPNIVGVKDA  176 (303)
T ss_dssp             HHHHTSTTEEEEEEC
T ss_pred             HHHCCCCCEEECCCC
T ss_conf             996569995124567


No 52 
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: MSE; 1.80A {Campylobacter jejuni} PDB: 3ler_A*
Probab=79.63  E-value=3.5  Score=20.96  Aligned_cols=117  Identities=13%  Similarity=0.106  Sum_probs=67.3

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-C-CCEEEECCCCCHHHCCCCC
Q ss_conf             2889999999999998889367633025633455445421576537999999999730-1-4479861332710011431
Q gi|255764463|r   64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI-P-NIGIITDVALDPFTIHGHD  141 (337)
Q Consensus        64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f-p-dl~vi~DVcLc~YT~hGHc  141 (337)
                      +...+.+.+.++.+.+.|+..+.+++...+-.     +-+.++   -.+.++.+.+.. + .+.|++-|.          
T Consensus        24 ~iD~~~l~~~i~~l~~~Gv~gl~v~G~tGE~~-----~Ls~~E---r~~l~~~~~~~~~~~~~~vi~gv~----------   85 (301)
T 3m5v_A           24 KVDEQSYARLIKRQIENGIDAVVPVGTTGESA-----TLTHEE---HRTCIEIAVETCKGTKVKVLAGAG----------   85 (301)
T ss_dssp             EECHHHHHHHHHHHHHTTCCEEECSSTTTTGG-----GSCHHH---HHHHHHHHHHHHTTSSCEEEEECC----------
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEECEECCCHH-----HCCHHH---HHHHHHHHHHHHCCCCCEEEECCC----------
T ss_conf             78999999999999984999899685213576-----689999---999999999983588763895577----------


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE---CCCC---CCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHH
Q ss_conf             001365446289999999999999962897352---4667---677999999999877885773003366643543
Q gi|255764463|r  142 GILCDGEIVNDETIELISHAAVIQADAGADIIA---PSEM---MDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSF  211 (337)
Q Consensus       142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA---PSdM---MDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~f  211 (337)
                            .    .+.+...+.|...+++|||.|.   |.=.   -++-+...++..+..   +.+|+-|.....+.+
T Consensus        86 ------~----~~~~~ai~la~~A~~~Gad~i~v~pP~~~~~s~~~~~~~~~~i~~a~---~~pi~iYn~P~~~~~  148 (301)
T 3m5v_A           86 ------S----NATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSV---DIPVLLYNVPGRTGC  148 (301)
T ss_dssp             ------C----SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---SSCEEEEECHHHHSC
T ss_pred             ------C----CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHC---CCCEEEEECCCCCCC
T ss_conf             ------6----67999999999999769999871588889989999999999998617---997899978873576


No 53 
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transferase; HET: KCX; 1.90A {Propionibacterium freudenreichiisubsp} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=79.59  E-value=3.5  Score=20.95  Aligned_cols=232  Identities=16%  Similarity=0.074  Sum_probs=113.2

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCC
Q ss_conf             87863288999999999999888936763302563345544542157653799999999973014479861332710011
Q gi|255764463|r   59 MPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIH  138 (337)
Q Consensus        59 MPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~h  138 (337)
                      ..|...++-+.+-..++...+.|+..+-.|.    .         .|.-..+..++...|+.-    ..+.+++|...+.
T Consensus       108 ~~g~~~~~~~vv~~~v~~s~~~g~~~~r~~~----~---------~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~  170 (539)
T 1rqb_A          108 LLGYRHYNDEVVDRFVDKSAENGMDVFRVFD----A---------MNDPRNMAHAMAAVKKAG----KHAQGTICYTISP  170 (539)
T ss_dssp             TTSSSCCCHHHHHHHHHHHHHTTCCEEEECC----T---------TCCTHHHHHHHHHHHHTT----CEEEEEEECCCST
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHCCHHHCCCC----H---------HHHHHHHHHHHHHHHHCC----CEEEEEEEECCCC
T ss_conf             3243237788999999999984516661686----7---------999998899999999769----9568999955788


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC--------HHHHHHHHHHHC---C--CCCCCEECHHH
Q ss_conf             4310013654462899999999999999628973524667677--------999999999877---8--85773003366
Q gi|255764463|r  139 GHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDG--------RVQEIRKKLDSH---G--HINVGIMPYVA  205 (337)
Q Consensus       139 GHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDG--------rV~aIR~~Ld~~---g--~~~~~ImsYsa  205 (337)
                      -             .|++.+.+.+-...++|||.|+-.||.-.        .|.++|+.+-..   +  +.|+.=|+-+.
T Consensus       171 ~-------------~~~~~~~~~a~~l~~~Gad~I~l~Dt~G~~~P~~v~~lv~~lk~~~~~~~~i~~H~Hnt~Gla~An  237 (539)
T 1rqb_A          171 V-------------HTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVS  237 (539)
T ss_dssp             T-------------CCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHH
T ss_pred             C-------------CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHH
T ss_conf             7-------------789999999999872598789955866665899999999999986586443256634887629999


Q ss_pred             HHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH--HHHCCCCEEEECCCHHHHHHHHHHHHHCCCC----
Q ss_conf             6435430101675310244677774431572114788988887--6640898799553114589999999624998----
Q gi|255764463|r  206 KFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASI--DIQESADMLLVKPGLPYLDVCFRIKEKFGLP----  279 (337)
Q Consensus       206 KfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~--D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P----  279 (337)
                      =++..-.|-  |.++++=..-|. .+.|-+    -|.+.....  ..+-|-|+-.+...-.|+.-++..=..|.-+    
T Consensus       238 ~laAieaGa--d~vD~ai~glGg-~tgnp~----~E~vv~~L~~~g~~t~id~~~l~~i~~~~~~~r~~y~~~~~~~~~~  310 (539)
T 1rqb_A          238 LMKAIEAGV--DVVDTAISSMSL-GPGHNP----TESVAEMLEGTGYTTNLDYDRLHKIRDHFKAIRPKYKKFESKTLVD  310 (539)
T ss_dssp             HHHHHHTTC--SEEEEBCGGGCS-TTSBCB----HHHHHHHTTTSSEECCCCHHHHHHHHHHHHHHGGGGGGGCCSCSCC
T ss_pred             HHHHHHCCC--CEEEECCCCCCC-CCCCCC----HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             999998599--999968656788-888976----9999999863898887689999999999999998743576544566


Q ss_pred             --EEEEECC-HHHHHHHHH-HHCCCCCHHHHHHHHHHHHHHHCCCEE-EECHH
Q ss_conf             --9999346-189999999-988897889999999999977269999-82018
Q gi|255764463|r  280 --TFAYQVS-GEYAMIKAA-SLQGWINKNDAMMESLLAFKRAGCDGI-FTYFA  327 (337)
Q Consensus       280 --~~aYqVS-GEYami~~a-~~~g~~d~~~~~~E~l~~~kRAGAd~I-itY~A  327 (337)
                        +..+|+- |-|+-+++- .+.|..|.-.-+++-.--.++-.-+.+ +|=+.
T Consensus       311 ~~v~~~~~PGG~~snl~~q~~~~g~~~~~~ev~~e~~~v~~~lG~~~~VTP~S  363 (539)
T 1rqb_A          311 TSIFKSQIPGGMLSNMESQLRAQGAEDKMDEVMAEVPRVRKAAGFPPLVTPSS  363 (539)
T ss_dssp             CTHHHHCCCHHHHHHHHHHHHTTSCCTTHHHHHHHHHHHHHHTTCCCCCTTHH
T ss_pred             CEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             50133389845035668899867847669999999999999769997306140


No 54 
>3e49_A Uncharacterized protein DUF849 with A TIM barrel fold; YP_556190.1; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=79.51  E-value=3.6  Score=20.93  Aligned_cols=53  Identities=23%  Similarity=0.303  Sum_probs=43.3

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf             889999999999998889367633025633455-445421576537999999999730144
Q gi|255764463|r   65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRN-NTGSHIIDPDNLINEGICAIKKNIPNI  124 (337)
Q Consensus        65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd-~~GseA~n~dglv~rAIr~IK~~fpdl  124 (337)
                      ++.+++++++.+|++.|-..+=|.+      +| ++|...++++ ....++..|++..|.|
T Consensus        29 itpeEia~~a~~c~~AGAsivHlH~------Rd~~dG~~s~d~~-~y~~ii~~ir~~~~~i   82 (311)
T 3e49_A           29 VTPDEVAQASIGAAEAGAAVIHLHA------RDPRDGRPTQDPA-AFAEFLPRIKSNTDAV   82 (311)
T ss_dssp             CSHHHHHHHHHHHHHHTCSEEEECE------ECTTTCCEECCHH-HHTTHHHHHHHHCCCE
T ss_pred             CCHHHHHHHHHHHHHHCCCEEEEEE------CCCCCCCCCCCHH-HHHHHHHHHHHHCCCE
T ss_conf             9999999999999982652799764------5777899178999-9999999999759953


No 55 
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=78.89  E-value=3.7  Score=20.81  Aligned_cols=112  Identities=16%  Similarity=0.172  Sum_probs=58.8

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHCCCEEEECCCCCHHHCCCCC
Q ss_conf             32889999999999998889367633025633455445421576537999999-99973014479861332710011431
Q gi|255764463|r   63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGIC-AIKKNIPNIGIITDVALDPFTIHGHD  141 (337)
Q Consensus        63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr-~IK~~fpdl~vi~DVcLc~YT~hGHc  141 (337)
                      .....+.+.+.++.+.+.|++.|.+++.+.+-       .+++.+-- .+.++ .++...|   ||+-|+        + 
T Consensus        42 g~ID~~~~~~~i~~l~~~Gv~Gi~v~GstGE~-------~~Ls~eEr-~~l~~~~v~~rvp---vi~Gv~--------~-  101 (344)
T 2hmc_A           42 RTPDFDALVRKGKELIADGMSAVVYCGSMGDW-------PLLTDEQR-MEGVERLVKAGIP---VIVGTG--------A-  101 (344)
T ss_dssp             SSBCHHHHHHHHHHHHHTTCCCEEESSGGGTG-------GGSCHHHH-HHHHHHHHHTTCC---EEEECC--------C-
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEECEECCCH-------HHCCHHHH-HHHHHHHHHCCCC---EEEECC--------C-
T ss_conf             88299999999999997799999977543205-------45899999-9999999733886---899678--------7-


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE---ECCCC---CCCHH-HHHHHHHHHCCCCCCCEECHHHHH
Q ss_conf             00136544628999999999999996289735---24667---67799-999999987788577300336664
Q gi|255764463|r  142 GILCDGEIVNDETIELISHAAVIQADAGADII---APSEM---MDGRV-QEIRKKLDSHGHINVGIMPYVAKF  207 (337)
Q Consensus       142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv---APSdM---MDGrV-~aIR~~Ld~~g~~~~~ImsYsaKf  207 (337)
                                 .+.+...+.|....++|||.|   .|.-.   .++.+ ..-...++..  .+++||-|....
T Consensus       102 -----------~st~eai~~a~~a~~~Gad~vlv~pP~y~~~~~~~~~~~~~~~~i~~a--~~lPi~lYn~P~  161 (344)
T 2hmc_A          102 -----------VNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAA--PEIPAVIYNSPY  161 (344)
T ss_dssp             -----------SSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHS--TTSCEEEEEBGG
T ss_pred             -----------CCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEECCCC
T ss_conf             -----------889999999999998399745415863556641146899988887238--998668851787


No 56 
>2o7s_A DHQ-SDH, bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase; NADPH, dehydroshikimate, bifunctional enzyme, oxidoreductase; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=77.52  E-value=4.1  Score=20.55  Aligned_cols=101  Identities=14%  Similarity=0.167  Sum_probs=44.2

Q ss_pred             HCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHH--------HCC-CCCCCC---CC
Q ss_conf             888936763302563345544542157653799999999973014479861332710--------011-431001---36
Q gi|255764463|r   79 DLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPF--------TIH-GHDGIL---CD  146 (337)
Q Consensus        79 ~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~Y--------T~h-GHcGi~---~~  146 (337)
                      ..+++  +||- +  ..+.+-|....+++.- .+.++..-...+|.   .||=|.-.        ..| |++.++   |+
T Consensus        56 ~~~~p--iI~T-~--R~~~eGG~~~~~~~~~-~~ll~~~~~~~~d~---iDiEl~~~~~~~~~l~~~~~~~~kvI~S~H~  126 (523)
T 2o7s_A           56 KSPLP--TLFT-Y--RPKWEGGQYEGDENER-RDVLRLAMELGADY---IDVELQVASEFIKSIDGKKPGKFKVIVSSHN  126 (523)
T ss_dssp             HCSSC--EEEE-C--CBGGGTSSBCSCHHHH-HHHHHHHHHHTCSE---EEEEHHHHHHHHHHTTTCCCTTCEEEEEEEC
T ss_pred             HCCCC--EEEE-E--CCHHHCCCCCCCHHHH-HHHHHHHHHHCCCE---EEEECCCCHHHHHHHHHHHCCCCEEEEEECC
T ss_conf             38993--8999-5--7777799988999999-99999999979999---9998888589999999843489879999678


Q ss_pred             --CCCCHHHHHHHHHHHHHHHHHCCCCEE----ECCCCCCCHHHHHHHHHHHCC
Q ss_conf             --544628999999999999996289735----246676779999999998778
Q gi|255764463|r  147 --GEIVNDETIELISHAAVIQADAGADII----APSEMMDGRVQEIRKKLDSHG  194 (337)
Q Consensus       147 --g~IdND~Tl~~L~k~Al~~A~AGaDiv----APSdMMDGrV~aIR~~Ld~~g  194 (337)
                        +....+. +..+.+   -..+.|||+|    .|.+.-|  +..+-+.+.+.+
T Consensus       127 f~~tp~~~~-l~~~~~---~~~~~gadivKia~~~~~~~D--~~~ll~~~~~~~  174 (523)
T 2o7s_A          127 YQNTPSVED-LDGLVA---RIQQTGADIVKIATTAVDIAD--VARMFHITSKAQ  174 (523)
T ss_dssp             SSCCCCHHH-HHHHHH---HHHTTTCSEEEEEEECSSGGG--HHHHHHHHHHCS
T ss_pred             CCCCCCHHH-HHHHHH---HHHHHCCCEEEEEECCCCHHH--HHHHHHHHHHCC
T ss_conf             999988667-999999---999749996888516799899--999999985179


No 57 
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=76.42  E-value=4.3  Score=20.35  Aligned_cols=148  Identities=15%  Similarity=0.149  Sum_probs=77.3

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCC
Q ss_conf             28899999999999988893676330256334554454215765379999999997301447986133271001143100
Q gi|255764463|r   64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGI  143 (337)
Q Consensus        64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi  143 (337)
                      +...+.+.+.++.+.+.|+..+.+++.+.+-.       +.+.+- -.+.++...+....  ++.=|             
T Consensus        15 ~iD~~~~~~~i~~l~~~Gv~Gl~~~GstGE~~-------~Ls~~E-r~~l~~~~~~~~~~--~i~gv-------------   71 (286)
T 2r91_A           15 RLDPELFANHVKNITSKGVDVVFVAGTTGLGP-------ALSLQE-KMELTDAATSAARR--VIVQV-------------   71 (286)
T ss_dssp             EECHHHHHHHHHHHHHTTCCEEEETSTTTTGG-------GSCHHH-HHHHHHHHHHHCSS--EEEEC-------------
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEECEECCCHH-------HCCHHH-HHHHHHHHHHHCCC--EEECC-------------
T ss_conf             48999999999999977999999791265610-------289999-99999999974245--12111-------------


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCCCEE--ECCCC-----CCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHH
Q ss_conf             136544628999999999999996289735--24667-----67799999999987788577300336664354301016
Q gi|255764463|r  144 LCDGEIVNDETIELISHAAVIQADAGADII--APSEM-----MDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYR  216 (337)
Q Consensus       144 ~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv--APSdM-----MDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFR  216 (337)
                         +....+++    .++|...+++|+|.+  .|.-.     .+|-+...|...+.   .+++||=|-....+.+     
T Consensus        72 ---~~~st~~~----i~~a~~a~~~G~d~i~~~pp~~~~~~~~~~i~~~~~~ia~~---~~~pi~lYn~P~~~g~-----  136 (286)
T 2r91_A           72 ---ASLNADEA----IALAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSA---VSIPVFLYNYPAAVGR-----  136 (286)
T ss_dssp             ---CCSSHHHH----HHHHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHH---CSSCEEEEECHHHHSS-----
T ss_pred             ---CCCCHHHH----HHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHC---CCCEEEEECCCCCCCC-----
T ss_conf             ---24325899----99999999869998986698523468889999999987624---4743776348766130-----


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHC
Q ss_conf             753102446777744315721147889888876640898799553114589999999624
Q gi|255764463|r  217 DAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKF  276 (337)
Q Consensus       217 dA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~  276 (337)
                                      -+.+    +.+.+.       +.++.+|=+-+-++-+..+++..
T Consensus       137 ----------------~l~~----~l~~~l-------~~i~giK~~~~~~~~~~~~~~~~  169 (286)
T 2r91_A          137 ----------------DVDA----RAAKEL-------GCIRGVKDTNESLAHTLAYKRYL  169 (286)
T ss_dssp             ----------------CCCH----HHHHHH-------SCEEEEEECCSCHHHHHHHHHHC
T ss_pred             ----------------CCHH----HHHHHH-------CCEEEEEECCCCHHHHHHHHHCC
T ss_conf             ----------------3056----777876-------66437984886899999998607


No 58 
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium}
Probab=76.38  E-value=4.4  Score=20.34  Aligned_cols=170  Identities=20%  Similarity=0.288  Sum_probs=89.4

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCC
Q ss_conf             28899999999999988893676330256334554454215765379999999997301447986133271001143100
Q gi|255764463|r   64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGI  143 (337)
Q Consensus        64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi  143 (337)
                      ..+++.+++.++++.+ +|-.+-    +        |..-+...|  .+.|+.+++.+|+..++.|.=+           
T Consensus         9 ~~~~~~~l~~~~~~~~-~v~~ik----v--------g~~l~~~~G--~~~i~~l~~~~~~~~i~~D~K~-----------   62 (211)
T 3f4w_A            9 ELTLPEAMVFMDKVVD-DVDIIE----V--------GTPFLIREG--VNAIKAIKEKYPHKEVLADAKI-----------   62 (211)
T ss_dssp             SCCHHHHHHHHHHHGG-GCSEEE----E--------CHHHHHHHT--THHHHHHHHHCTTSEEEEEEEE-----------
T ss_pred             CCCHHHHHHHHHHHCC-CCCEEE----E--------CEEEHHCCC--HHHHHHHHHHCCCCCEEEEEEC-----------
T ss_conf             8999999999998179-877999----4--------662042179--8999999985799707988843-----------


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCC-HHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCC
Q ss_conf             13654462899999999999999628973524667677-99999999987788577300336664354301016753102
Q gi|255764463|r  144 LCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDG-RVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTR  222 (337)
Q Consensus       144 ~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDG-rV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~  222 (337)
                           .|+..|+.      ...+++|||+|.-..-+.- .+.+..++..+.|-. +.+.                     
T Consensus        63 -----~di~~t~~------~~~~~~gad~vtvh~~~g~~~l~~~~~~~~~~~~~-~~v~---------------------  109 (211)
T 3f4w_A           63 -----MDGGHFES------QLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQ-VVVD---------------------  109 (211)
T ss_dssp             -----CSCHHHHH------HHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCE-EEEE---------------------
T ss_pred             -----CCCHHHHH------HHHHHCCCCEEEEEHHHCHHHHHHHHHHHHHHCCE-EEEE---------------------
T ss_conf             -----48688999------99997199999982640667899999998752443-4787---------------------


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHH-------HHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
Q ss_conf             446777744315721147889888876640898799553114-------5899999996249989999346189999999
Q gi|255764463|r  223 DLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLP-------YLDVCFRIKEKFGLPTFAYQVSGEYAMIKAA  295 (337)
Q Consensus       223 p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~-------yLDii~~~k~~~~~P~~aYqVSGEYami~~a  295 (337)
                                .+.+.+..+..++.   .+.|.|++.+.++..       ..+-+..+++.+.....  .|+|        
T Consensus       110 ----------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i--~v~g--------  166 (211)
T 3f4w_A          110 ----------MICVDDLPARVRLL---EEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRRKARI--AVAG--------  166 (211)
T ss_dssp             ----------CTTCSSHHHHHHHH---HHHTCCEEEEECCHHHHHTTCCSHHHHHHHHHHCSSCEE--EEES--------
T ss_pred             ----------ECCCCCHHHHHHHH---HHCCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCCE--ECCC--------
T ss_conf             ----------40899999999987---635889999886225312057699999999997187665--2289--------


Q ss_pred             HHCCCCCHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             98889788999999999997726999982
Q gi|255764463|r  296 SLQGWINKNDAMMESLLAFKRAGCDGIFT  324 (337)
Q Consensus       296 ~~~g~~d~~~~~~E~l~~~kRAGAd~Iit  324 (337)
                         | +..     |+......+|||++|-
T Consensus       167 ---G-i~~-----~~~~~a~~~Gad~iVv  186 (211)
T 3f4w_A          167 ---G-ISS-----QTVKDYALLGPDVVIV  186 (211)
T ss_dssp             ---S-CCT-----TTHHHHHTTCCSEEEE
T ss_pred             ---C-CCC-----CCHHHHHHCCCCEEEE
T ss_conf             ---7-060-----5799999859899998


No 59 
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=76.12  E-value=4.4  Score=20.29  Aligned_cols=26  Identities=8%  Similarity=0.019  Sum_probs=17.8

Q ss_pred             HHHHHHHHHHHHHCCCCEEECCCCCC
Q ss_conf             99999999999962897352466767
Q gi|255764463|r  155 IELISHAAVIQADAGADIIAPSEMMD  180 (337)
Q Consensus       155 l~~L~k~Al~~A~AGaDivAPSdMMD  180 (337)
                      .+.+.+++....++|+|.|.-.|++-
T Consensus       155 ~~~~~~~~~~~~~~g~d~i~l~Dt~G  180 (298)
T 2cw6_A          155 PAKVAEVTKKFYSMGCYEISLGDTIG  180 (298)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEEETTS
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             89999999999972886346688532


No 60 
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=75.87  E-value=4.5  Score=20.25  Aligned_cols=72  Identities=21%  Similarity=0.260  Sum_probs=50.6

Q ss_pred             CEEEECCCCC----EEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC-CCCCCCCCCCCHHHHHHHHH
Q ss_conf             1666758988----110488878632889999999999998889367633025633455-44542157653799999999
Q gi|255764463|r   43 PIFLTSGEKT----VESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRN-NTGSHIIDPDNLINEGICAI  117 (337)
Q Consensus        43 PiFV~eg~~~----k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd-~~GseA~n~dglv~rAIr~I  117 (337)
                      |++|+--.|-    |..=|.+|    ++.|++.+++..|++.|-..+=|.+      +| .+|..+++++ ....++..|
T Consensus         7 ~viIt~A~nGa~~tk~~~P~lP----iTpeEia~~A~~c~~AGAaivHlH~------Rd~~dG~~s~d~~-~y~eii~~i   75 (314)
T 3lot_A            7 VVIVTCAITGAIHTPSMSPYLP----VTPDQIVEEAVKAAEAGAGMVHIHA------RDPKDGRPTTDVE-VFRYICREI   75 (314)
T ss_dssp             EECEEEECSCSSSCGGGCTTSC----CSHHHHHHHHHHHHHHTCSEEEECE------ECTTTCCEECCHH-HHHHHHHHH
T ss_pred             CEEEEECCCCCCCCCCCCCCCC----CCHHHHHHHHHHHHHHCCCEEEEEE------CCCCCCCCCCCHH-HHHHHHHHH
T ss_conf             5899988889969702299998----9999999999999982652899873------4777798478999-999999999


Q ss_pred             HHHHCCCEE
Q ss_conf             973014479
Q gi|255764463|r  118 KKNIPNIGI  126 (337)
Q Consensus       118 K~~fpdl~v  126 (337)
                      |+.. ++.|
T Consensus        76 R~~~-d~ii   83 (314)
T 3lot_A           76 KKQS-DVVI   83 (314)
T ss_dssp             HHHC-CCEE
T ss_pred             HHCC-CCEE
T ss_conf             8659-9589


No 61 
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris}
Probab=75.40  E-value=4.6  Score=20.17  Aligned_cols=110  Identities=14%  Similarity=0.124  Sum_probs=59.6

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCC
Q ss_conf             328899999999999988893676330256334554454215765379999999997301-4479861332710011431
Q gi|255764463|r   63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHD  141 (337)
Q Consensus        63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHc  141 (337)
                      .....+.+.+.++.+.+.|+..|.+++...+-       .+++.+ =-.+.++...+..+ .+-|++-|-          
T Consensus        20 g~iD~~~~~~~i~~l~~~Gv~gi~~~GttGE~-------~~Ls~~-Er~~~~~~~~~~~~~~~~vi~gv~----------   81 (300)
T 3eb2_A           20 GRVRADVMGRLCDDLIQAGVHGLTPLGSTGEF-------AYLGTA-QREAVVRATIEAAQRRVPVVAGVA----------   81 (300)
T ss_dssp             SCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTG-------GGCCHH-HHHHHHHHHHHHHTTSSCBEEEEE----------
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCH-------HHCCHH-HHHHHHHHHHHHHCCCCCEEEECC----------
T ss_conf             39799999999999997599989975532436-------559999-999999999986146885899457----------


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE---CCCC---CCCHHHHHHHHHHHCCCCCCCEECH
Q ss_conf             001365446289999999999999962897352---4667---6779999999998778857730033
Q gi|255764463|r  142 GILCDGEIVNDETIELISHAAVIQADAGADIIA---PSEM---MDGRVQEIRKKLDSHGHINVGIMPY  203 (337)
Q Consensus       142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA---PSdM---MDGrV~aIR~~Ld~~g~~~~~ImsY  203 (337)
                            .    .+.+...++|-...++|+|.|-   |.-.   -++-+...+...+.   .+.+|+-|
T Consensus        82 ------~----~s~~~~i~~a~~a~~~Gad~i~v~pP~~~~~~~~~~~~~~~~va~~---~~~piiiY  136 (300)
T 3eb2_A           82 ------S----TSVADAVAQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADA---VEIPVVIY  136 (300)
T ss_dssp             ------E----SSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHH---CSSCEEEE
T ss_pred             ------C----CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC---CCCCEEEE
T ss_conf             ------6----6488999999777644981798526533577779999999988755---89967987


No 62 
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} PDB: 3hf3_A*
Probab=75.16  E-value=4.7  Score=20.13  Aligned_cols=168  Identities=17%  Similarity=0.201  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHCCCCEEEEEEC-----------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHH
Q ss_conf             9999999999888936763302-----------56334554454215765379999999997301-44798613327100
Q gi|255764463|r   69 VAVEKIKQVADLGIPAIAIFPN-----------IPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFT  136 (337)
Q Consensus        69 ~L~~eie~~~~lGI~av~LFp~-----------I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT  136 (337)
                      ...+.++.+.+.|.-.|-|-..           .-+.-+|+.|-.--|.--++...+++||+.+| |..|..=+..+++-
T Consensus       153 ~f~~AA~rA~~AGfDGVEiH~ahGyLl~qFlSp~~N~RtD~YGGs~enR~Rf~~Eii~aIr~~vg~~~~i~~R~s~~d~~  232 (349)
T 3hgj_A          153 AFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWG  232 (349)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCS
T ss_pred             HHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
T ss_conf             99999999998098914605126799999058876898876787877888999999999999708997289967702146


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHH
Q ss_conf             11431001365446289999999999999962897352466767799999999987788577300336664354301016
Q gi|255764463|r  137 IHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYR  216 (337)
Q Consensus       137 ~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFR  216 (337)
                               +|-.+.+++++    .+-.+.++|+|.+--|...-.              .... +....-|...|-.-.|
T Consensus       233 ---------~~g~~~ee~~~----~~~~l~~~g~d~~~~s~~~~~--------------~~~~-~~~~~~~~~~~~~~ik  284 (349)
T 3hgj_A          233 ---------EGGWSLEDTLA----FARRLKELGVDLLDCSSGGVV--------------LRVR-IPLAPGFQVPFADAVR  284 (349)
T ss_dssp             ---------TTSCCHHHHHH----HHHHHHHTTCCEEEEECCCSC--------------SSSC-CCCCTTTTHHHHHHHH
T ss_pred             ---------CCCCCHHHHHH----HHHHHHHCCCCEEEECCCCCC--------------CCCC-CCCCCCCCHHHHHHHH
T ss_conf             ---------79987799999----999998759751641256421--------------2434-5667643368999999


Q ss_pred             HHHHCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCEEE-ECCCHHHHHHHHHHHHHC
Q ss_conf             753102446-7777443157211478898888766408-98799-553114589999999624
Q gi|255764463|r  217 DAISTRDLL-KGDKKTYYLDPANVQEAIREASIDIQES-ADMLL-VKPGLPYLDVCFRIKEKF  276 (337)
Q Consensus       217 dA~~S~p~~-~gdr~sYQmd~~n~~eA~~e~~~D~~EG-AD~lM-VKPa~~yLDii~~~k~~~  276 (337)
                      .+++ .|.. .|.-.    +|       -+++.-++|| ||+++ -+|.+.-=|.++++++.-
T Consensus       285 ~~~~-ipvi~~G~i~----~~-------e~ae~~l~~g~~D~V~~gR~~iadPdl~~k~~~g~  335 (349)
T 3hgj_A          285 KRVG-LRTGAVGLIT----TP-------EQAETLLQAGSADLVLLGRVLLRDPYFPLRAAKAL  335 (349)
T ss_dssp             HHHC-CEEEECSSCC----CH-------HHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHHHT
T ss_pred             HHCC-CCEEEECCCC----CH-------HHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHCCC
T ss_conf             8759-9689988939----99-------99999998799211598899986906999998089


No 63 
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, cytoplasm; 2.00A {Neisseria meningitidis serogroup B}
Probab=75.07  E-value=4.7  Score=20.11  Aligned_cols=112  Identities=13%  Similarity=0.124  Sum_probs=63.5

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCC
Q ss_conf             328899999999999988893676330256334554454215765379999999997301-4479861332710011431
Q gi|255764463|r   63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHD  141 (337)
Q Consensus        63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHc  141 (337)
                      .....+.+.+.++.+.+.|++.+.+++...+..       +++.+ =-.+.++...+..+ ..-|++-|.          
T Consensus        23 ~~iD~~~~~~~i~~l~~~Gv~gl~~~G~tGE~~-------~Ls~~-Er~~l~~~~~~~~~~~~~vi~gv~----------   84 (297)
T 3flu_A           23 GSIHYEQLRDLIDWHIENGTDGIVAVGTTGESA-------TLSVE-EHTAVIEAVVKHVAKRVPVIAGTG----------   84 (297)
T ss_dssp             SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGG-------GSCHH-HHHHHHHHHHHHHTTSSCEEEECC----------
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHH-------HCHHH-HHHHHHHHHHHHCCCCCCCCCCCC----------
T ss_conf             596999999999999976999899684156377-------69199-999999999987036555456767----------


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE--ECCCC----CCCHHHHHHHHHHHCCCCCCCEECHHH
Q ss_conf             00136544628999999999999996289735--24667----677999999999877885773003366
Q gi|255764463|r  142 GILCDGEIVNDETIELISHAAVIQADAGADII--APSEM----MDGRVQEIRKKLDSHGHINVGIMPYVA  205 (337)
Q Consensus       142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv--APSdM----MDGrV~aIR~~Ld~~g~~~~~ImsYsa  205 (337)
                         .       .+.+...+.|....++|||.|  .|.-.    -|+-+...+...|..   +.+|+-|..
T Consensus        85 ---~-------~s~~~~i~~a~~a~~~Gad~v~v~pP~~~~~s~~~i~~~~~~i~~a~---~~pi~lYn~  141 (297)
T 3flu_A           85 ---A-------NNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEAT---SIPMIIYNV  141 (297)
T ss_dssp             ---C-------SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHC---CSCEEEEEC
T ss_pred             ---C-------CCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCC---CCCEEEEEC
T ss_conf             ---5-------63999999999999829987562588788989999999999998547---998899978


No 64 
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=74.69  E-value=4.8  Score=20.08  Aligned_cols=92  Identities=14%  Similarity=0.177  Sum_probs=45.3

Q ss_pred             HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCC--CCCCC
Q ss_conf             9999999998889367633025633455445421576537999999999730144798613327100114310--01365
Q gi|255764463|r   70 AVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDG--ILCDG  147 (337)
Q Consensus        70 L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcG--i~~~g  147 (337)
                      |.+.++.+.++|.+++-+|+.=|..         |+...+-...++.+|+.+.+..+    -+...+.|++..  +....
T Consensus        14 l~~~~~~~~e~G~~~~qif~~~p~~---------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~y~~nl~~~d   80 (287)
T 2x7v_A           14 FDRVPQDTVNIGGNSFQIFPHNARS---------WSAKLPSDEAATKFKREMKKHGI----DWENAFCHSGYLINLASPK   80 (287)
T ss_dssp             GGGHHHHHHHTTCSEEEECSCCCSS---------SCCCCCCHHHHHHHHHHHHHHTC----CGGGEEEECCTTCCTTCSS
T ss_pred             HHHHHHHHHHCCCCEEEEECCCCCC---------CCCCCCCHHHHHHHHHHHHHCCC----CCEEEEECCCCHHHHCCCC
T ss_conf             9999999997499999996799878---------88899999999999999998599----8427874263146305999


Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             446289999999999999962897352
Q gi|255764463|r  148 EIVNDETIELISHAAVIQADAGADIIA  174 (337)
Q Consensus       148 ~IdND~Tl~~L~k~Al~~A~AGaDivA  174 (337)
                      .-..+.+++.+.+..-.-++-||+.|-
T Consensus        81 ~~~r~~~i~~l~~~i~~a~~LGa~~vv  107 (287)
T 2x7v_A           81 DDIWQKSVELLKKEVEICRKLGIRYLN  107 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf             999999999999999999980998053


No 65 
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=74.69  E-value=4.8  Score=20.05  Aligned_cols=140  Identities=15%  Similarity=0.202  Sum_probs=58.6

Q ss_pred             ECCCCC-CCCCCCHHHHHHHHHHHH-HCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCC
Q ss_conf             048887-863288999999999999-888936763302563345544542157653799999999973014479861332
Q gi|255764463|r   55 SINSMP-DVMRMSIDVAVEKIKQVA-DLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVAL  132 (337)
Q Consensus        55 ~I~SMP-Gv~R~Sid~L~~eie~~~-~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcL  132 (337)
                      -|.-|| |-|..|.+..++.+.+.+ +.|..+|-|-++.  +               ....|+.|.+.  .|-|++-+-|
T Consensus        98 ii~DmPf~sy~~s~~~a~~~A~r~~~e~gadavkleg~~--~---------------~~~~I~~L~~~--GIPV~gHiGL  158 (281)
T 1oy0_A           98 VVADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEGGE--R---------------VAEQIACLTAA--GIPVMAHIGF  158 (281)
T ss_dssp             EEEECCTTSSTTCHHHHHHHHHHHHHTTCCSEEEEEBSG--G---------------GHHHHHHHHHH--TCCEEEEEEC
T ss_pred             EEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCH--H---------------HHHHHHHHHHC--CCCEEEEECC
T ss_conf             895686533478999999999999997142301324504--0---------------79999999987--9967863046


Q ss_pred             CHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECH-HHHHHHHH
Q ss_conf             71001143100136544628999999999999996289735246676779999999998778857730033-66643543
Q gi|255764463|r  133 DPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPY-VAKFNSSF  211 (337)
Q Consensus       133 c~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsY-saKfaS~f  211 (337)
                      -|.+.+---|.-..|+  +++. ..|.+.|..+-+|||..|--..+=.---+.|.+.      .+++..+. |.+++..=
T Consensus       159 tPQ~~~~~Gg~rv~gk--~~~a-~~l~~da~~le~AGa~~ivlE~VP~~lA~~It~~------l~IPtIGIGaG~~cDGQ  229 (281)
T 1oy0_A          159 TPQSVNTLGGFRVQGR--GDAA-EQTIADAIAVAEAGAFAVVMEMVPAELATQITGK------LTIPTVGIGAGPNCDGQ  229 (281)
T ss_dssp             CC----------------CHHH-HHHHHHHHHHHHHTCSEEEEESCCHHHHHHHHHH------CSSCEEEESSCSCSSEE
T ss_pred             CHHHHHCCCCCCCCCH--HHHH-HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH------CCCEEEEECCCCCCCEE
T ss_conf             7366301487630452--7888-8899999999837980887734736789999851------78238950468988678


Q ss_pred             HCCHHHHHHCC
Q ss_conf             01016753102
Q gi|255764463|r  212 YGPYRDAISTR  222 (337)
Q Consensus       212 YgPFRdA~~S~  222 (337)
                      |==+-|.+|-.
T Consensus       230 vLV~~DiLG~~  240 (281)
T 1oy0_A          230 VLVWQDMAGFS  240 (281)
T ss_dssp             EECHHHHTTCS
T ss_pred             EEEHHHHHCCC
T ss_conf             88398650899


No 66 
>3bsm_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9262H, clone 9262H1BCT8P1; 2.20A {Chromohalobacter salexigens dsm 3043}
Probab=73.99  E-value=5  Score=19.94  Aligned_cols=151  Identities=17%  Similarity=0.237  Sum_probs=78.6

Q ss_pred             CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC------------------CCCCC---C
Q ss_conf             89881104888786328899999999999988893676330256334554454------------------21576---5
Q gi|255764463|r   49 GEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGS------------------HIIDP---D  107 (337)
Q Consensus        49 g~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~Gs------------------eA~n~---d  107 (337)
                      |-..++.|+.--.....+.+.+++++++..+.|.++|-+=.+.+. .++..+.                  ..|..   -
T Consensus       112 GG~~r~~i~~ya~~~~~~~~~~~~~~~~~~~~G~~~~Kikvg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (413)
T 3bsm_A          112 GGKSRERVMTYAHCTGQTIEDCLGEVARHVELGYRAVRVQSGVPG-IETTYGVAKTPGERYEPADSSLPAEHVWSTEKYL  190 (413)
T ss_dssp             TCCSCSSEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCCC-----------------------------CHHHHH
T ss_pred             CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC-CCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf             886551357776337887699999999999759751565427872-0121111127400047433356522334426678


Q ss_pred             CHHHHHHHHHHHHH-CCCEEEECCCCCHHHCCCC---------CCCC--CCC-CCCHHHHHHHHHH--------------
Q ss_conf             37999999999730-1447986133271001143---------1001--365-4462899999999--------------
Q gi|255764463|r  108 NLINEGICAIKKNI-PNIGIITDVALDPFTIHGH---------DGIL--CDG-EIVNDETIELISH--------------  160 (337)
Q Consensus       108 glv~rAIr~IK~~f-pdl~vi~DVcLc~YT~hGH---------cGi~--~~g-~IdND~Tl~~L~k--------------  160 (337)
                      ....+.++++++.+ |++.++.|. -+.||...=         .++.  .+- ..++-+.+..|.+              
T Consensus       191 ~~~~~~v~air~~~G~~~~l~vDa-N~~~~~~~A~~~~~~l~~~~l~w~EeP~~~~d~~~~~~l~~~~~ipIa~gE~~~~  269 (413)
T 3bsm_A          191 NHAPKLFAAVRERFGDDLHVLHDV-HHRLTPIEAARLGKAVEPYHLFWLEDCVPAENQESLRLIREHTTTPLAIGEVFNS  269 (413)
T ss_dssp             HHHHHHHHHHHHHHCSSSEEEEEC-TTCSCHHHHHHHHHHTGGGCCSEEECCSCCSSGGGGHHHHHHCCSCEEECTTCCS
T ss_pred             HHHHHHHHHHHHHHCCCCCEEECC-CCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             889999999999819764321355-4555568899999986223400353875547887889999851788105756554


Q ss_pred             --HHHHHHHCC-CCEEECCCCCCCHHHHHHHHHHHCCCCCCCEE
Q ss_conf             --999999628-97352466767799999999987788577300
Q gi|255764463|r  161 --AAVIQADAG-ADIIAPSEMMDGRVQEIRKKLDSHGHINVGIM  201 (337)
Q Consensus       161 --~Al~~A~AG-aDivAPSdMMDGrV~aIR~~Ld~~g~~~~~Im  201 (337)
                        ....+.+.| +|++-|--+--|-+...++..+-..-.++.++
T Consensus       270 ~~~~~~li~~~a~dii~~d~~~~GGit~~~~ia~lA~~~gi~v~  313 (413)
T 3bsm_A          270 IHDCRELIQNQWIDYIRMPLTHGGGITAMRRVADLASLYHVRTG  313 (413)
T ss_dssp             GGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEC
T ss_pred             HHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHCCCEEE
T ss_conf             28899998753588773575346879999999999998699487


No 67 
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase, lysine biosynthesis; 1.50A {Hahella chejuensis}
Probab=73.72  E-value=5.1  Score=19.89  Aligned_cols=117  Identities=11%  Similarity=0.089  Sum_probs=66.8

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEECCCCCHHHCCCCCC
Q ss_conf             2889999999999998889367633025633455445421576537999999999730-144798613327100114310
Q gi|255764463|r   64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI-PNIGIITDVALDPFTIHGHDG  142 (337)
Q Consensus        64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f-pdl~vi~DVcLc~YT~hGHcG  142 (337)
                      ....+.+.+.++.+.+.|+.++.+.+...+-     -+-+.++--   +.++...+.. +++-|++-|        |+  
T Consensus        17 ~iD~~~~~~~i~~l~~~Gv~gi~v~G~tGE~-----~~Ls~~Er~---~l~~~~~~~~~~~~~vi~gv--------~~--   78 (297)
T 2rfg_A           17 QVDEKALAGLVDWQIKHGAHGLVPVGTTGES-----PTLTEEEHK---RVVALVAEQAQGRVPVIAGA--------GS--   78 (297)
T ss_dssp             EECHHHHHHHHHHHHHTTCSEEECSSGGGTG-----GGSCHHHHH---HHHHHHHHHHTTSSCBEEEC--------CC--
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEECEECCCH-----HHCCHHHHH---HHHHHHHHHCCCCCEEEEEC--------CC--
T ss_conf             6899999999999997799999979233145-----348999999---99999899718997099968--------86--


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE---CCC---CCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHH
Q ss_conf             01365446289999999999999962897352---466---7677999999999877885773003366643543
Q gi|255764463|r  143 ILCDGEIVNDETIELISHAAVIQADAGADIIA---PSE---MMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSF  211 (337)
Q Consensus       143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA---PSd---MMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~f  211 (337)
                                .+.+...+.|...+++|+|.|.   |+-   --++-+..-++..+..   +++|+=|.....+.+
T Consensus        79 ----------~~~~~ai~~a~~a~~~G~d~i~~~~P~~~~~~~~~~~~~f~~i~~a~---~iPi~lYn~P~~~g~  140 (297)
T 2rfg_A           79 ----------NNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAI---DIPIIVYNIPPRAVV  140 (297)
T ss_dssp             ----------SSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHC---SSCEEEEECHHHHSC
T ss_pred             ----------HHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHC---CCCEEEEECCCCCCC
T ss_conf             ----------01999999999999809998970688788989999999999999867---997899978741477


No 68 
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=73.50  E-value=5.1  Score=19.86  Aligned_cols=117  Identities=16%  Similarity=0.155  Sum_probs=66.2

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCCC
Q ss_conf             28899999999999988893676330256334554454215765379999999997301-44798613327100114310
Q gi|255764463|r   64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHDG  142 (337)
Q Consensus        64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHcG  142 (337)
                      ....+.+.+.++.+.+.|+..+.+++...+-     -+-+.++.   .+.++.+.+..+ .+.|+.-             
T Consensus        33 ~iD~~~~~~~i~~li~~Gv~Gi~v~G~tGE~-----~~Ls~~Er---~~l~~~~~~~~~~~~~vi~g-------------   91 (304)
T 3cpr_A           33 DIDIAAGREVAAYLVDKGLDSLVLAGTTGES-----PTTTAAEK---LELLKAVREEVGDRAKLIAG-------------   91 (304)
T ss_dssp             CBCHHHHHHHHHHHHHTTCCEEEESSTTTTT-----TTSCHHHH---HHHHHHHHHHHTTTSEEEEE-------------
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEECEEHHHH-----HHCCHHHH---HHHHHHHHHHHCCCCCEEEE-------------
T ss_conf             9499999999999997699989978551415-----55899999---99999999983688767862-------------


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE---ECCCC---CCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHH
Q ss_conf             0136544628999999999999996289735---24667---677999999999877885773003366643543
Q gi|255764463|r  143 ILCDGEIVNDETIELISHAAVIQADAGADII---APSEM---MDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSF  211 (337)
Q Consensus       143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv---APSdM---MDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~f  211 (337)
                      +...       +.+.-.+.+-...++|||.|   .|.-.   -++-+...++..+.   .+.+|+-|-.-..+.+
T Consensus        92 ~~~~-------s~~~~i~~a~~a~~~Gad~i~v~pP~~~~~~~~~i~~~~~~v~~a---~~~pi~~y~~p~~~g~  156 (304)
T 3cpr_A           92 VGTN-------NTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAA---TEVPICLYDIPGRSGI  156 (304)
T ss_dssp             CCCS-------CHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH---CCSCEEEEECHHHHSS
T ss_pred             CCCC-------HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH---CCCCEEEEECCCCCCC
T ss_conf             5741-------299999999999973999999889877898999999999999973---5997677635543488


No 69 
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJM; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=72.83  E-value=5.3  Score=19.76  Aligned_cols=52  Identities=13%  Similarity=0.160  Sum_probs=21.6

Q ss_pred             HHHHHHHHHCCCCEEEEEEC-----------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf             99999999888936763302-----------56334554454215765379999999997301
Q gi|255764463|r   71 VEKIKQVADLGIPAIAIFPN-----------IPMDLRNNTGSHIIDPDNLINEGICAIKKNIP  122 (337)
Q Consensus        71 ~~eie~~~~lGI~av~LFp~-----------I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp  122 (337)
                      .+.++.+.+.|.-.|-|-..           .-+.-+|+.|-.--|.--++...+++||+..+
T Consensus       147 ~~AA~rA~~aGfDGVEIH~ahGyLl~qFlSp~~N~R~DeYGGs~enR~Rf~~Eii~avr~~v~  209 (338)
T 1z41_A          147 KQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWD  209 (338)
T ss_dssp             HHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             999999998199806576668889999639402856786777777878899999999999854


No 70 
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A substrate tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=72.45  E-value=5.4  Score=19.70  Aligned_cols=87  Identities=17%  Similarity=0.116  Sum_probs=45.6

Q ss_pred             CCCCCCHHHH-----HHHHHHHHHHCCCCEEEECC-------CHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCC
Q ss_conf             3157211478-----89888876640898799553-------11458999999962499899993461899999999888
Q gi|255764463|r  232 YYLDPANVQE-----AIREASIDIQESADMLLVKP-------GLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQG  299 (337)
Q Consensus       232 YQmd~~n~~e-----A~~e~~~D~~EGAD~lMVKP-------a~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g  299 (337)
                      ||.-..+.++     ++--+..-++-||--+++--       -.+-|++++.+++.+++|+.|   ||           |
T Consensus       439 ~~v~~~ggr~~t~~~~~~~~~~~~~~GaGEIlltsId~DGt~~G~Dl~l~~~i~~~~~iPvIa---sG-----------G  504 (555)
T 1jvn_A          439 YQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVKDAVKIPVIA---SS-----------G  504 (555)
T ss_dssp             EEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTCSCCCHHHHHHHHHHCSSCEEE---CS-----------C
T ss_pred             EEEEECCCEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEE---EC-----------C
T ss_conf             999971880628999999999999669989999625477888876999999999758989999---78-----------9


Q ss_pred             CCCHHHHHHHHHHHHHHHCCCEEEEC--------HHHHHHHHHHC
Q ss_conf             97889999999999977269999820--------18999999850
Q gi|255764463|r  300 WINKNDAMMESLLAFKRAGCDGIFTY--------FAMEAARILTH  336 (337)
Q Consensus       300 ~~d~~~~~~E~l~~~kRAGAd~IitY--------~A~~~a~~L~~  336 (337)
                      .-+.++ +.|   .|+.+|++.++.=        --.++.++|++
T Consensus       505 ~g~~~d-i~~---~~~~~~~~av~~~s~fh~~~~~i~~~K~~L~~  545 (555)
T 1jvn_A          505 AGVPEH-FEE---AFLKTRADACLGAGMFHRGEFTVNDVKEYLLE  545 (555)
T ss_dssp             CCSHHH-HHH---HHHHSCCSEEEESHHHHTTSCCHHHHHHHHHH
T ss_pred             CCCHHH-HHH---HHHHCCCEEEEEEHHHHCCCCCHHHHHHHHHH
T ss_conf             899999-999---99868974998800667799899999999998


No 71 
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=72.45  E-value=5.4  Score=19.70  Aligned_cols=81  Identities=19%  Similarity=0.246  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHC-CCCEEEEECCH-H--HHHHHHHHHCCC----------CCHH
Q ss_conf             47889888876640898799553114589999999624-99899993461-8--999999998889----------7889
Q gi|255764463|r  239 VQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKF-GLPTFAYQVSG-E--YAMIKAASLQGW----------INKN  304 (337)
Q Consensus       239 ~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~-~~P~~aYqVSG-E--Yami~~a~~~g~----------~d~~  304 (337)
                      -.|||+-.....+-|||++++- ++..+|-++.+.+.+ ..|+.+=.+.| .  +--+.-..+.|+          .---
T Consensus       169 ~~eaI~R~~aY~~AGAD~if~~-g~~~~~~~~~i~~~~~~~pl~~n~~~~g~tp~ls~~eL~~lGv~~v~~~~~~~raa~  247 (302)
T 3fa4_A          169 YEESVARLRAARDAGADVGFLE-GITSREMARQVIQDLAGWPLLLNMVEHGATPSISAAEAKEMGFRIIIFPFAALGPAV  247 (302)
T ss_dssp             HHHHHHHHHHHHTTTCSEEEET-TCCCHHHHHHHHHHTTTSCEEEECCTTSSSCCCCHHHHHHHTCSEEEETTTTHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCEEEE-CCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHCCCCEEEECHHHHHHHH
T ss_conf             9999999998553488826641-466267789999972489721013337999988999999779989997739999999


Q ss_pred             HHHHHHHHHHHHHCCC
Q ss_conf             9999999999772699
Q gi|255764463|r  305 DAMMESLLAFKRAGCD  320 (337)
Q Consensus       305 ~~~~E~l~~~kRAGAd  320 (337)
                      +++.+.+..+++-|-.
T Consensus       248 ~a~~~~l~~l~~~G~~  263 (302)
T 3fa4_A          248 AAMREAMEKLKRDGIP  263 (302)
T ss_dssp             HHHHHHHHHHHHHSSC
T ss_pred             HHHHHHHHHHHHCCCC
T ss_conf             9999999999974997


No 72 
>1l6w_A Fructose-6-phosphate aldolase 1; alpha-beta barrel, domain swapping, lyase; 1.93A {Escherichia coli} SCOP: c.1.10.1
Probab=72.35  E-value=1.4  Score=23.66  Aligned_cols=93  Identities=15%  Similarity=0.283  Sum_probs=53.1

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCC
Q ss_conf             89999999999998889367633025633455445421576537999999999730144798613327100114310013
Q gi|255764463|r   66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILC  145 (337)
Q Consensus        66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~  145 (337)
                      ..+..+++++.+.+++=+-  ++ +||-.   +        .|  .++++.+++.  .+-+-+-.|++            
T Consensus        64 ~~~~mi~~A~~l~~~~~ni--~v-KIP~t---~--------~g--~~a~~~L~~~--Gi~vn~Tav~s------------  113 (220)
T 1l6w_A           64 TAEGMVNDALKLRSIIADI--VV-KVPVT---A--------EG--LAAIKMLKAE--GIPTLGTAVYG------------  113 (220)
T ss_dssp             SHHHHHHHHHHHHHHSTTC--EE-EEECS---H--------HH--HHHHHHHHHH--TCCEEEEEECS------------
T ss_pred             CHHHHHHHHHHHHHHCCCC--EE-EEECC---H--------HH--HHHHHHHHHC--CCCEEEECCCC------------
T ss_conf             6777899999999728675--89-95062---7--------57--8999998873--93288400187------------


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCEEECC-CCC-----C--CHHHHHHHHHHHCCCCCCCEEC
Q ss_conf             6544628999999999999996289735246-676-----7--7999999999877885773003
Q gi|255764463|r  146 DGEIVNDETIELISHAAVIQADAGADIIAPS-EMM-----D--GRVQEIRKKLDSHGHINVGIMP  202 (337)
Q Consensus       146 ~g~IdND~Tl~~L~k~Al~~A~AGaDivAPS-dMM-----D--GrV~aIR~~Ld~~g~~~~~Ims  202 (337)
                                   ..||+.-|++||++|+|= +-|     |  ..|..|++.++.+|+. +-||.
T Consensus       114 -------------~~Qa~~Aa~aga~yvsp~~gR~~d~g~dg~~~i~~~~~~~~~~~~~-tkIl~  164 (220)
T 1l6w_A          114 -------------AAQGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAPQ-AKVLA  164 (220)
T ss_dssp             -------------HHHHHHHHHHTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHHCTT-CEEEE
T ss_pred             -------------HHHHHHHHHCCCCEEEEEEEEHHHCCCCCHHHHHHHHHHHHHCCCC-EEEEE
T ss_conf             -------------9999999972557075554224524688689999999999835898-09998


No 73 
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=72.24  E-value=5.5  Score=19.67  Aligned_cols=15  Identities=33%  Similarity=0.277  Sum_probs=11.6

Q ss_pred             HHHHHHHHHCCCCEE
Q ss_conf             999999996289735
Q gi|255764463|r  159 SHAAVIQADAGADII  173 (337)
Q Consensus       159 ~k~Al~~A~AGaDiv  173 (337)
                      .++|.-+.++|||.|
T Consensus       195 ~e~a~~L~~aGAD~V  209 (400)
T 3ffs_A          195 EEATKELIENGADGI  209 (400)
T ss_dssp             HHHHHHHHHTTCSEE
T ss_pred             HHHHHHHHHCCCCEE
T ss_conf             999999998099856


No 74 
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta- barrel, lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=72.14  E-value=4.2  Score=20.45  Aligned_cols=130  Identities=12%  Similarity=0.138  Sum_probs=72.1

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCC
Q ss_conf             99999999999988893676330256334554454215765379999999997301447986133271001143100136
Q gi|255764463|r   67 IDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCD  146 (337)
Q Consensus        67 id~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~  146 (337)
                      .+..++.++-+.+.||+.+=+=--      ++        +  .-.+|+.++++||++.|=+                  
T Consensus        37 ~~~a~~~a~al~~~Gi~~iEitl~------tp--------~--a~e~i~~l~~~~p~~~iGa------------------   82 (225)
T 1mxs_A           37 EEDILPLADALAAGGIRTLEVTLR------SQ--------H--GLKAIQVLREQRPELCVGA------------------   82 (225)
T ss_dssp             GGGHHHHHHHHHHTTCCEEEEESS------ST--------H--HHHHHHHHHHHCTTSEEEE------------------
T ss_pred             HHHHHHHHHHHHHCCCCEEEEECC------CC--------H--HHHHHHHHHHHCCCCEEEE------------------
T ss_conf             999999999999879988999589------94--------0--9999999997499707865------------------


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCEE-ECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCC
Q ss_conf             544628999999999999996289735-2466767799999999987788577300336664354301016753102446
Q gi|255764463|r  147 GEIVNDETIELISHAAVIQADAGADII-APSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLL  225 (337)
Q Consensus       147 g~IdND~Tl~~L~k~Al~~A~AGaDiv-APSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~  225 (337)
                      |-|.|-+.++       ...+|||+++ .|. .-..-+    +.--++|+.   .                        +
T Consensus        83 GTV~~~~~~~-------~a~~aGa~FivsP~-~~~~v~----~~a~~~~i~---~------------------------i  123 (225)
T 1mxs_A           83 GTVLDRSMFA-------AVEAAGAQFVVTPG-ITEDIL----EAGVDSEIP---L------------------------L  123 (225)
T ss_dssp             ECCCSHHHHH-------HHHHHTCSSEECSS-CCHHHH----HHHHHCSSC---E------------------------E
T ss_pred             EECCCHHHHH-------HHHHCCCCEEECCC-CCHHHH----HHHHHCCCC---C------------------------C
T ss_conf             3036799999-------99977998998898-959999----999865997---2------------------------5


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHH--HHHHHHHHHHC-CCCEE
Q ss_conf             7777443157211478898888766408987995531145--89999999624-99899
Q gi|255764463|r  226 KGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPY--LDVCFRIKEKF-GLPTF  281 (337)
Q Consensus       226 ~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~y--LDii~~~k~~~-~~P~~  281 (337)
                      .|        ....    -|+..=.+-|+|+|=+=||-..  +..++.++.-+ +++..
T Consensus       124 PG--------v~Tp----sEi~~A~~~G~~~vK~FPA~~~Gg~~~lkal~~p~p~i~~~  170 (225)
T 1mxs_A          124 PG--------ISTP----SEIMMGYALGYRRFKLFPAEISGGVAAIKAFGGPFGDIRFC  170 (225)
T ss_dssp             CE--------ECSH----HHHHHHHTTTCCEEEETTHHHHTHHHHHHHHHTTTTTCEEE
T ss_pred             CC--------CCCH----HHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCCCCCCCEE
T ss_conf             78--------6998----99999998699818776401027999998640656677166


No 75 
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=71.78  E-value=5.4  Score=19.71  Aligned_cols=130  Identities=17%  Similarity=0.211  Sum_probs=72.6

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCC
Q ss_conf             99999999999988893676330256334554454215765379999999997301447986133271001143100136
Q gi|255764463|r   67 IDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCD  146 (337)
Q Consensus        67 id~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~  146 (337)
                      .+..+..++-+.+.||+.|=+=-      .++        +  -.++|+.++++|||+.|=+                  
T Consensus        27 ~~~a~~i~~al~~~Gi~~iEItl------~tp--------~--a~~~i~~l~~~~p~~~iGa------------------   72 (214)
T 1wbh_A           27 LEHAVPMAKALVAGGVRVLNVTL------RTE--------C--AVDAIRAIAKEVPEAIVGA------------------   72 (214)
T ss_dssp             GGGHHHHHHHHHHTTCCEEEEES------CST--------T--HHHHHHHHHHHCTTSEEEE------------------
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEC------CCH--------H--HHHHHHHHHHHCCCCEEEE------------------
T ss_conf             99999999999987998899937------986--------7--9999999998789967952------------------


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCEE-ECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCC
Q ss_conf             544628999999999999996289735-2466767799999999987788577300336664354301016753102446
Q gi|255764463|r  147 GEIVNDETIELISHAAVIQADAGADII-APSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLL  225 (337)
Q Consensus       147 g~IdND~Tl~~L~k~Al~~A~AGaDiv-APSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~  225 (337)
                      |-|.|-++++       ...+|||+++ +|. . |                 -.+..|+.+.. -.|-         |  
T Consensus        73 GTV~~~e~~~-------~a~~aGa~FivsP~-~-~-----------------~~v~~~a~~~~-i~~i---------P--  114 (214)
T 1wbh_A           73 GTVLNPQQLA-------EVTEAGAQFAISPG-L-T-----------------EPLLKAATEGT-IPLI---------P--  114 (214)
T ss_dssp             ESCCSHHHHH-------HHHHHTCSCEEESS-C-C-----------------HHHHHHHHHSS-SCEE---------E--
T ss_pred             CCCCCHHHHH-------HHHHCCCCEEECCC-C-C-----------------HHHHHHHHHCC-CCCC---------C--
T ss_conf             4545368999-------99981998998589-9-9-----------------99999998549-9753---------7--


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHH--HHHHHHHHHHC-CCCEE
Q ss_conf             7777443157211478898888766408987995531145--89999999624-99899
Q gi|255764463|r  226 KGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPY--LDVCFRIKEKF-GLPTF  281 (337)
Q Consensus       226 ~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~y--LDii~~~k~~~-~~P~~  281 (337)
                       |        .....    |+..=.+-|+|++=+=||-.+  +.-|+.++.-+ .+++.
T Consensus       115 -G--------v~Tps----Ei~~A~~~G~~~vK~FPA~~~Gg~~~ik~l~~p~p~i~~~  160 (214)
T 1wbh_A          115 -G--------ISTVS----ELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFC  160 (214)
T ss_dssp             -E--------ESSHH----HHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTCTTCEEE
T ss_pred             -C--------CCCHH----HHHHHHHCCCCEEEECHHHHCCHHHHHHHHHHHCCCCEEE
T ss_conf             -8--------49889----9999998599959976024208098999874213377076


No 76 
>2dgd_A 223AA long hypothetical arylmalonate decarboxylase; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=71.70  E-value=5.2  Score=19.81  Aligned_cols=120  Identities=10%  Similarity=0.125  Sum_probs=69.5

Q ss_pred             HCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEEC-HHHHHHHHHHCCHHHH----HHCCCCC--CCCCCCCCCCCCHH
Q ss_conf             628973524667677999999999877885773003-3666435430101675----3102446--77774431572114
Q gi|255764463|r  167 DAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMP-YVAKFNSSFYGPYRDA----ISTRDLL--KGDKKTYYLDPANV  239 (337)
Q Consensus       167 ~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~Ims-YsaKfaS~fYgPFRdA----~~S~p~~--~gdr~sYQmd~~n~  239 (337)
                      +.+.+++-|+       .++-++|..-|..++++++ |...-.-.+..=|+++    +... .+  ..+..-...++..-
T Consensus        87 ~~~~~~~~~~-------~A~~~AL~~lg~krIav~TPY~~~v~~~~~~~~~~~G~eVv~~~-~l~~~~~~~i~~~~~~~i  158 (223)
T 2dgd_A           87 RVIKDVVIPE-------ESVYELLKKLNVRKLWIGTPYIKERTLEEVEWWRNKGFEIVGYD-GLGKIRGIDISNTPIFTI  158 (223)
T ss_dssp             HHSTTCBCHH-------HHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHHHTTTCEEEEEE-ECCCCSHHHHHTCCHHHH
T ss_pred             HCCCCCCCHH-------HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEEC-CCCCCCCCCCCCCCHHHH
T ss_conf             5347656879-------99999999729980799678865778999999996791375202-048776542023999999


Q ss_pred             HHHHHHHHHHHHCCCCEEEE-CCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
Q ss_conf             78898888766408987995-531145899999996249989999346189999999
Q gi|255764463|r  240 QEAIREASIDIQESADMLLV-KPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAA  295 (337)
Q Consensus       240 ~eA~~e~~~D~~EGAD~lMV-KPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a  295 (337)
                      .++.++...|. .+||.+.+ =-+|+-+++|.++-+.+++||..=+..--+.+++.+
T Consensus       159 ~~~~~~~~~~~-~~adav~iscT~l~t~~~i~~lE~~lg~PVisSNqa~~W~~Lr~~  214 (223)
T 2dgd_A          159 YRLVKRHLNEV-LKADAVYIACTALSTYEAVQYLHEDLDMPVVSENAAAMWEALNKL  214 (223)
T ss_dssp             HHHHHTTHHHH-TTSSEEEECCTTSCCTTHHHHHHHHHTSCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCC-CCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHC
T ss_conf             99999974114-578789994158638889999999989899978999999999985


No 77 
>5rub_A Rubisco (ribulose-1,5-bisphosphate carboxylase(slash)oxygenase); lyase(carbon-carbon); 1.70A {Rhodospirillum rubrum} SCOP: c.1.14.1 d.58.9.1 PDB: 1rus_A 2rus_A 9rub_A* 1rba_A
Probab=71.17  E-value=5.6  Score=19.61  Aligned_cols=146  Identities=17%  Similarity=0.114  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
Q ss_conf             99999999999999628973524667677999999999877885773003366643543010167531024467777443
Q gi|255764463|r  153 ETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTY  232 (337)
Q Consensus       153 ~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sY  232 (337)
                      -|-+.+++++-..+ .|.|+|-=                .++..|-+-+.+.-.+.-+     -+|++.+-.-.|-++-|
T Consensus       195 Lsp~~~a~~~ye~~-~GgDfIKD----------------DE~ladq~f~p~~eRv~~v-----~eai~~A~~eTG~~klY  252 (490)
T 5rub_A          195 LRPKPFAEACHAFW-LGGDFIKN----------------DEPQGNQPFAPLRDTIALV-----ADAMRRAQDETGEAKLF  252 (490)
T ss_dssp             CCHHHHHHHHHHHT-TTCSEEEC----------------CTTCSCBTTBCHHHHHHHH-----HHHHHHHHHHHSSCCEE
T ss_pred             CCHHHHHHHHHHHH-CCCCCCCC----------------CCCCCCCCCCCHHHHHHHH-----HHHHHHHHHHHCCCCEE
T ss_conf             99899999999985-15885427----------------7667798887789999999-----99999999986885558


Q ss_pred             CCCCCH--HHHHHHHHHHHHHCCC-----CEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHH
Q ss_conf             157211--4788988887664089-----879955311458999999962499899993461899999999888978899
Q gi|255764463|r  233 YLDPAN--VQEAIREASIDIQESA-----DMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKND  305 (337)
Q Consensus       233 Qmd~~n--~~eA~~e~~~D~~EGA-----D~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~  305 (337)
                      -.+...  ..|-++....-.+.|+     -.+||-+-..-++.++.+++.+..+...+|-+|-=++.-.....| ++.. 
T Consensus       253 a~NITa~~~~em~~Ra~~~~e~gg~~a~~~~lmi~~~~~G~~a~~~lr~~~~~~~ih~Hra~~ga~~~~~~~~G-~s~~-  330 (490)
T 5rub_A          253 SANITADDPFEIIARGEYVLETFGENASHVALLVDGYVAGAAAITTARRRFPDNFLHYHRAGHGAVTSPQSKRG-YTAF-  330 (490)
T ss_dssp             EEECCCSSHHHHHHHHHHHHHHHGGGGGGEEEEEETTTSCHHHHHHHHHHCTTSCEEEECTTTHHHHSTTCCSE-ECHH-
T ss_pred             EEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCC-CCHH-
T ss_conf             87447899999999999999835853353379981520169999999974565430023222243336786786-8399-


Q ss_pred             HHHHHHHHHHHHCCCEEEEC
Q ss_conf             99999999977269999820
Q gi|255764463|r  306 AMMESLLAFKRAGCDGIFTY  325 (337)
Q Consensus       306 ~~~E~l~~~kRAGAd~IitY  325 (337)
                      + +  ..-.+-||||.|++.
T Consensus       331 v-l--~Kl~RLaGaD~ih~g  347 (490)
T 5rub_A          331 V-H--CKMARLQGASGIHTG  347 (490)
T ss_dssp             H-H--HHHHHHHTCSEEECC
T ss_pred             H-H--HHHHHHCCCCEEEEC
T ss_conf             9-9--999998187868706


No 78 
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=71.16  E-value=5.8  Score=19.51  Aligned_cols=65  Identities=18%  Similarity=0.142  Sum_probs=36.6

Q ss_pred             CCCCCC-HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCC
Q ss_conf             315721-147889888876640898799553114589999999624-998999934618999999998889
Q gi|255764463|r  232 YYLDPA-NVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGW  300 (337)
Q Consensus       232 YQmd~~-n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~  300 (337)
                      |+...+ |..+|+....   .+--|.+|+ |++.=+++++.+|+.. ..|+...--.++-.....|-+.|.
T Consensus        43 ~~v~~a~~g~~al~~l~---~~~~DlviL-p~~~G~ell~~ir~~~~~~piiilT~~~~~~~~~~al~~Ga  109 (137)
T 2pln_A           43 FMADVTESLEDGEYLMD---IRNYDLVMV-SDKNALSFVSRIKEKHSSIVVLVSSDNPTSEEEVHAFEQGA  109 (137)
T ss_dssp             CEEEEESCHHHHHHHHH---HSCCSEEEE-CSTTHHHHHHHHHHHSTTSEEEEEESSCCHHHHHHHHHTTC
T ss_pred             CEEEEECCHHHHHHHHH---CCCCCEEEE-ECCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCC
T ss_conf             99999899999999997---289999998-27876379999996288997599964899999999998699


No 79 
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=70.15  E-value=6.1  Score=19.36  Aligned_cols=165  Identities=16%  Similarity=0.150  Sum_probs=81.5

Q ss_pred             HHHHHHHHHHHHCCCCEEEEEE------------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCH
Q ss_conf             9999999999988893676330------------256334554454215765379999999997301-447986133271
Q gi|255764463|r   68 DVAVEKIKQVADLGIPAIAIFP------------NIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDP  134 (337)
Q Consensus        68 d~L~~eie~~~~lGI~av~LFp------------~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~  134 (337)
                      +.-.+.++.+.+.|.-.|-|-.            .. +.-.|+.|-.--|.--|....|++||+..| |..|..-+.-++
T Consensus       141 ~~f~~aA~ra~~aGfDgVeih~ahGyLl~qFlsp~~-N~R~D~yGGs~enR~Rf~~eii~~ir~~~g~~~~v~~Ris~~~  219 (671)
T 1ps9_A          141 DNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRT-NQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLD  219 (671)
T ss_dssp             HHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTT-CCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEEC
T ss_pred             HHHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf             999999999998299989945342149998421226-8777766768777768899999999876199853888426411


Q ss_pred             HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCC
Q ss_conf             00114310013654462899999999999999628973524667677999999999877885773003366643543010
Q gi|255764463|r  135 FTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGP  214 (337)
Q Consensus       135 YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgP  214 (337)
                      +-..|         ...++++    +.+-.+.++|.|++-.|..+..              ...+.+..     ..+.++
T Consensus       220 ~~~~~---------~~~~~~~----~~~~~l~~~g~d~~~~~~g~~~--------------~~~~~~~~-----~~~~~~  267 (671)
T 1ps9_A          220 LVEDG---------GTFAETV----ELAQAIEAAGATIINTGIGWHE--------------ARIPTIAT-----PVPRGA  267 (671)
T ss_dssp             CSTTC---------CCHHHHH----HHHHHHHHHTCSEEEEEECBTT--------------CSSCSSST-----TSCTTT
T ss_pred             CCCCC---------CCHHHHH----HHHHHHHHHCCCEEECCCCCCC--------------CCCCCCCC-----CCCCHH
T ss_conf             25789---------9889999----9999999848720212235544--------------56765567-----664115


Q ss_pred             HHHHHHC------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCEEEE-CCCHHHHHHHHHHHHH
Q ss_conf             1675310------24467777443157211478898888766408-987995-5311458999999962
Q gi|255764463|r  215 YRDAIST------RDLLKGDKKTYYLDPANVQEAIREASIDIQES-ADMLLV-KPGLPYLDVCFRIKEK  275 (337)
Q Consensus       215 FRdA~~S------~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EG-AD~lMV-KPa~~yLDii~~~k~~  275 (337)
                      |-..+..      -|.....   .-.+|       ..++.-+++| ||++.+ .|-+..=|.++++++.
T Consensus       268 ~~~~~~~~~~~~~~pvi~~g---~~~~~-------~~ae~~l~~g~~D~v~~gR~~iadPd~~~k~~~g  326 (671)
T 1ps9_A          268 FSWVTRKLKGHVSLPLVTTN---RINDP-------QVADDILSRGDADMVSMARPFLADAELLSKAQSG  326 (671)
T ss_dssp             THHHHHHHTTSCSSCEEECS---SCCSH-------HHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHTT
T ss_pred             HHHHHHHHHCCCCCCEEEEC---CCCCH-------HHHHHHHHCCCCCEEECCHHHHHCCHHHHHHHCC
T ss_conf             69999998514433479717---87778-------9999999779988660045977194689999729


No 80 
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=70.06  E-value=6.1  Score=19.35  Aligned_cols=65  Identities=29%  Similarity=0.355  Sum_probs=45.9

Q ss_pred             CCHHHHHHHHHHHHHHCCCCEEEECCCHH----------HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHH
Q ss_conf             21147889888876640898799553114----------58999999962499899993461899999999888978899
Q gi|255764463|r  236 PANVQEAIREASIDIQESADMLLVKPGLP----------YLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKND  305 (337)
Q Consensus       236 ~~n~~eA~~e~~~D~~EGAD~lMVKPa~~----------yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~  305 (337)
                      ..|..|+.    .-..+|+|++.+=|-.+          -++.++++++.+.+|++|-               |-++.+.
T Consensus       115 ~h~~~e~~----~a~~~g~DYi~~gpvf~T~sk~~~~~~g~~~l~~~~~~~~~Pv~Ai---------------GGI~~~n  175 (215)
T 1xi3_A          115 VYSLEEAL----EAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESVKIPVVAI---------------GGINKDN  175 (215)
T ss_dssp             ESSHHHHH----HHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHCSSCEEEE---------------SSCCTTT
T ss_pred             CCHHHHHH----HHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEE---------------CCCCHHH
T ss_conf             66599999----9987699889962443068888888765889999987357982787---------------7999999


Q ss_pred             HHHHHHHHHHHHCCCEEEE
Q ss_conf             9999999997726999982
Q gi|255764463|r  306 AMMESLLAFKRAGCDGIFT  324 (337)
Q Consensus       306 ~~~E~l~~~kRAGAd~Iit  324 (337)
                           +..+.++||+.|..
T Consensus       176 -----i~~~~~~Ga~giAv  189 (215)
T 1xi3_A          176 -----AREVLKTGVDGIAV  189 (215)
T ss_dssp             -----HHHHHTTTCSEEEE
T ss_pred             -----HHHHHHCCCCEEEE
T ss_conf             -----99999809989997


No 81 
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=69.84  E-value=6.2  Score=19.32  Aligned_cols=115  Identities=13%  Similarity=0.115  Sum_probs=65.6

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCC
Q ss_conf             28899999999999988893676330256334554454215765-37999999999730144798613327100114310
Q gi|255764463|r   64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPD-NLINEGICAIKKNIPNIGIITDVALDPFTIHGHDG  142 (337)
Q Consensus        64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~d-glv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcG  142 (337)
                      ....+.+.+.++.+.+.|+..+.+++...+..     +-+..+- -++..+++..+.   .+-||+-|        |+  
T Consensus        17 ~iD~~~~~~~i~~l~~~Gv~gi~v~G~tGE~~-----~Ls~eEr~~l~~~~~~~~~~---~~~vi~gv--------~~--   78 (292)
T 2vc6_A           17 RIDEVALHDLVEWQIEEGSFGLVPCGTTGESP-----TLSKSEHEQVVEITIKTANG---RVPVIAGA--------GS--   78 (292)
T ss_dssp             EECHHHHHHHHHHHHHTTCSEEETTSGGGTGG-----GSCHHHHHHHHHHHHHHHTT---SSCBEEEC--------CC--
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEECEECHHHH-----HCCHHHHHHHHHHHHHHCCC---CCCEEEEC--------CC--
T ss_conf             82999999999999977999999770411254-----58999999999999987179---86189736--------84--


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE---C-----CCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHH
Q ss_conf             01365446289999999999999962897352---4-----667677999999999877885773003366643543
Q gi|255764463|r  143 ILCDGEIVNDETIELISHAAVIQADAGADIIA---P-----SEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSF  211 (337)
Q Consensus       143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA---P-----SdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~f  211 (337)
                                .+.+...+.+...+++|||.|.   |     |+  |+-+...++..+.   .+.+||-|..-..+.+
T Consensus        79 ----------~s~~~~i~~a~~a~~~Gad~v~v~pP~~~~~s~--~~l~~~~~~v~~~---~~~pi~~Yn~P~~~~~  140 (292)
T 2vc6_A           79 ----------NSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQ--EGIYQHFKAIDAA---STIPIIVYNIPGRSAI  140 (292)
T ss_dssp             ----------SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH--HHHHHHHHHHHHH---CSSCEEEEECHHHHSC
T ss_pred             ----------HHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCH--HHHHHHHHHHHHH---CCCCEEEEECCCCCCC
T ss_conf             ----------379999999999997699999987998899899--9999999999830---5787899955885588


No 82 
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=67.93  E-value=6.7  Score=19.06  Aligned_cols=109  Identities=14%  Similarity=0.155  Sum_probs=59.5

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCC
Q ss_conf             328899999999999988893676330256334554454215765379999999997301-4479861332710011431
Q gi|255764463|r   63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHD  141 (337)
Q Consensus        63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHc  141 (337)
                      ...-.+.+.+.++.+.+.|+..+.+++.+.+.       .+++.+ =-.+.++...+..+ .+.|+.=+.          
T Consensus        28 ~~iD~~~~~~~i~~l~~~Gv~gl~i~GstGE~-------~~Ls~e-Er~~l~~~~~~~~~~~~~vi~g~~----------   89 (314)
T 3d0c_A           28 REIDWKGLDDNVEFLLQNGIEVIVPNGNTGEF-------YALTIE-EAKQVATRVTELVNGRATVVAGIG----------   89 (314)
T ss_dssp             CCBCHHHHHHHHHHHHHTTCSEECTTSGGGTG-------GGSCHH-HHHHHHHHHHHHHTTSSEEEEEEC----------
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEECEECCCH-------HHCCHH-HHHHHHHHHHHHCCCCEEEEEECC----------
T ss_conf             98399999999999997699989968500005-------348999-999999988887099514997468----------


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE---CCCC---CCCHHHHHHHHHHHCCCCCCCEECH
Q ss_conf             001365446289999999999999962897352---4667---6779999999998778857730033
Q gi|255764463|r  142 GILCDGEIVNDETIELISHAAVIQADAGADIIA---PSEM---MDGRVQEIRKKLDSHGHINVGIMPY  203 (337)
Q Consensus       142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA---PSdM---MDGrV~aIR~~Ld~~g~~~~~ImsY  203 (337)
                             ...++++    +.|....++|||.|.   |+-.   -++-+...++..|..   +.+|+=|
T Consensus        90 -------~st~~~i----~~a~~a~~~Gad~i~v~~P~~~~~~~~~i~~~f~~ia~~~---~~Pi~iY  143 (314)
T 3d0c_A           90 -------YSVDTAI----ELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEAL---DAPSIIY  143 (314)
T ss_dssp             -------SSHHHHH----HHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHS---SSCEEEE
T ss_pred             -------CCHHHHH----HHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCC---CCCEEEE
T ss_conf             -------8889999----9999999729884420588556776799999999997504---7985777


No 83 
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A*
Probab=67.19  E-value=7  Score=18.96  Aligned_cols=111  Identities=15%  Similarity=0.119  Sum_probs=58.9

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCC
Q ss_conf             28899999999999988893676330256334554454215765379999999997301447986133271001143100
Q gi|255764463|r   64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGI  143 (337)
Q Consensus        64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi  143 (337)
                      ....+.+.+.++.+.+.|+..|.+++...+..       +++.+- -.+.++...+....+  +.             |+
T Consensus        16 ~iD~~~~~~~i~~l~~~Gv~gi~i~GttGE~~-------~Ls~~E-r~~~~~~~~~~~~~~--i~-------------~v   72 (293)
T 1w3i_A           16 RIDKEKLKIHAENLIRKGIDKLFVNGTTGLGP-------SLSPEE-KLENLKAVYDVTNKI--IF-------------QV   72 (293)
T ss_dssp             SBCHHHHHHHHHHHHHTTCCEEEESSTTTTGG-------GSCHHH-HHHHHHHHHTTCSCE--EE-------------EC
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEECCHHHHHH-------HCCHHH-HHHHHHHHHHHCCCE--EE-------------EC
T ss_conf             96999999999999986999899783456466-------588999-999999987535413--54-------------12


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCCCEE---ECCCC----CCCHHHHHHHHHHHCCCCCCCEECHHHHH
Q ss_conf             136544628999999999999996289735---24667----67799999999987788577300336664
Q gi|255764463|r  144 LCDGEIVNDETIELISHAAVIQADAGADII---APSEM----MDGRVQEIRKKLDSHGHINVGIMPYVAKF  207 (337)
Q Consensus       144 ~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv---APSdM----MDGrV~aIR~~Ld~~g~~~~~ImsYsaKf  207 (337)
                         +...-++|    .+.+-...++|+|.+   .|.-.    -++-+..-++.-+.   .+.+|+-|-.-.
T Consensus        73 ---~~~s~~~~----i~~a~~a~~~Gad~~~~~~P~~~~~~~~~~l~~~~~~ia~a---~~~pi~iYn~P~  133 (293)
T 1w3i_A           73 ---GGLNLDDA----IRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEV---SPHPVYLYNYPT  133 (293)
T ss_dssp             ---CCSCHHHH----HHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHH---CSSCEEEEECHH
T ss_pred             ---CCCCHHHH----HHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHH---HCCEEEEECCCC
T ss_conf             ---55667877----88877777449655504687000358899999999999972---255378871675


No 84 
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=67.13  E-value=7  Score=18.95  Aligned_cols=116  Identities=11%  Similarity=0.119  Sum_probs=60.2

Q ss_pred             CCCCHHHHHHHHHHHHHC-CCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCC
Q ss_conf             328899999999999988-893676330256334554454215765379999999997301-447986133271001143
Q gi|255764463|r   63 MRMSIDVAVEKIKQVADL-GIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGH  140 (337)
Q Consensus        63 ~R~Sid~L~~eie~~~~l-GI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGH  140 (337)
                      .....+.+.+.++.+++. |+..|.+++...+-       .+++.+ =-.+.++...+..+ .+-|++-|        |+
T Consensus        19 g~iD~~~~~~~i~~~i~~~Gv~gi~~~GstGE~-------~~Ls~~-Er~~l~~~~~~~~~~~~~vi~gv--------~~   82 (293)
T 1f6k_A           19 GTINEKGLRQIIRHNIDKMKVDGLYVGGSTGEN-------FMLSTE-EKKEIFRIAKDEAKDQIALIAQV--------GS   82 (293)
T ss_dssp             SCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTG-------GGSCHH-HHHHHHHHHHHHHTTSSEEEEEC--------CC
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCH-------HHCCHH-HHHHHHHHHHHHCCCCCEEEEEC--------CC
T ss_conf             793999999999999982799989979216305-------448899-99989988776327884299835--------76


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE---CCCC---CCCHHHHHHHHHHHCCCCCCCEECHHHHHHH
Q ss_conf             1001365446289999999999999962897352---4667---6779999999998778857730033666435
Q gi|255764463|r  141 DGILCDGEIVNDETIELISHAAVIQADAGADIIA---PSEM---MDGRVQEIRKKLDSHGHINVGIMPYVAKFNS  209 (337)
Q Consensus       141 cGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA---PSdM---MDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS  209 (337)
                      +            +.+...+.|-..+++|||.|.   |.-.   .++-+..-++.-+   ..+.+||=|-.-..+
T Consensus        83 ~------------~~~~~i~la~~a~~~Gad~v~~~pP~~~~~~~~~~~~~~~~ia~---~~~~pi~iYn~P~~~  142 (293)
T 1f6k_A           83 V------------NLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIA---ETGSNMIVYSIPFLT  142 (293)
T ss_dssp             S------------CHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHH---HHCCCEEEEECHHHH
T ss_pred             C------------CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHH---CCCCEEEEEECCCCC
T ss_conf             7------------79999999999997599977725851123241999999999850---588627886054101


No 85 
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=66.50  E-value=7.2  Score=18.87  Aligned_cols=182  Identities=10%  Similarity=0.039  Sum_probs=87.6

Q ss_pred             CCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCC-CC--CCC-----------C---CCCHHHHHHHHHHHHHHHHHCC
Q ss_conf             53799999999973014479861332710011431-00--136-----------5---4462899999999999999628
Q gi|255764463|r  107 DNLINEGICAIKKNIPNIGIITDVALDPFTIHGHD-GI--LCD-----------G---EIVNDETIELISHAAVIQADAG  169 (337)
Q Consensus       107 dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHc-Gi--~~~-----------g---~IdND~Tl~~L~k~Al~~A~AG  169 (337)
                      -.++..|++.+|+++++-.-+.-.|-.|+|.-.+. |-  ..+           .   .-.-+...+.+.+.+..+.++|
T Consensus       121 ~~~v~eai~~~~~~l~~~vpligf~ggP~Tla~~li~g~~~~~~~~~~~~~~~~p~~~~~ll~~~~~~~~~~~~~qi~~G  200 (354)
T 3cyv_A          121 LGYVMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAG  200 (354)
T ss_dssp             THHHHHHHHHHHHHTTTSSCEEEEEECHHHHHHHHHHSSCCSSCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             10177899998986178764698658759999999648752368999998632999999999999999999999999639


Q ss_pred             CCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCH-HHHHHCCCCCCCCCCCC-CCCCCHHHHHHHHHH
Q ss_conf             9735246676779999999998778857730033666435430101-67531024467777443-157211478898888
Q gi|255764463|r  170 ADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPY-RDAISTRDLLKGDKKTY-YLDPANVQEAIREAS  247 (337)
Q Consensus       170 aDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPF-RdA~~S~p~~~gdr~sY-Qmd~~n~~eA~~e~~  247 (337)
                      ||+|.-.|..=|.                  +  |-+..-.|..|+ +..+..-......+... =..+.+...-+   .
T Consensus       201 ad~i~i~D~~a~~------------------l--s~~~~~ef~~p~~~~i~~~l~~~~~~~~~~~i~~~~~~~~~l---~  257 (354)
T 3cyv_A          201 AQAVMIFDTWGGV------------------L--TGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWL---E  257 (354)
T ss_dssp             CSEEEEECTTGGG------------------S--CHHHHHHHTHHHHHHHHHHSCSEETTEECCEEEECTTTTTTH---H
T ss_pred             CCEEEEEHHHHHC------------------C--CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHH---H
T ss_conf             9789996024322------------------8--989998999987999999998625788713873168709988---7


Q ss_pred             HHHHCCCCEEEECCCHHHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC--CCEEEE
Q ss_conf             76640898799553114589999999624998-999934618999999998889788999999999997726--999982
Q gi|255764463|r  248 IDIQESADMLLVKPGLPYLDVCFRIKEKFGLP-TFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAG--CDGIFT  324 (337)
Q Consensus       248 ~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P-~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAG--Ad~Iit  324 (337)
                      .-.+-|+|.+=+-+....-    .+++.++-. +..=+|+-.  ++     .|  +.+++.-|+..+++..|  -.+|+.
T Consensus       258 ~~~~~g~d~ls~d~~~d~~----~~~~~~g~~~~l~GNldP~--~L-----~g--t~e~i~~~~~~~l~~~~~~~g~I~~  324 (354)
T 3cyv_A          258 AMAETGCDALGLDWTTDIA----DARRRVGNKVALQGNMDPS--ML-----YA--PPARIEEEVATILAGFGHGEGHVFN  324 (354)
T ss_dssp             HHHTTSCSEEECCTTSCHH----HHHHHHTTTSEEECCBCGG--GG-----GS--CHHHHHHHHHHHHTTTTTSSCEEBC
T ss_pred             HHHHHCCCEECCCCCCCHH----HHHHHCCCCCEEEECCCHH--HH-----CC--CHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             8886187600566676999----9999748995388178868--97-----69--9999999999999984799995997


No 86 
>3ez4_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; cytoplasm, magnesium, metal-binding, pantothenate biosynthesis; 2.10A {Burkholderia pseudomallei}
Probab=66.00  E-value=7.3  Score=18.81  Aligned_cols=93  Identities=16%  Similarity=0.102  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEE--------ECCHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf             1478898888766408987995531145899999996249989999--------34618999999998889788999999
Q gi|255764463|r  238 NVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAY--------QVSGEYAMIKAASLQGWINKNDAMME  309 (337)
Q Consensus       238 n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aY--------qVSGEYami~~a~~~g~~d~~~~~~E  309 (337)
                      +..+|++.+.+=++.|||.+-+.-+..++|+|+.+.+ ..+||.+-        +.-|-|..     +-.--++...++|
T Consensus        98 ~~~~a~~~a~~l~~~GAdaVKlEgg~~~~~~I~~L~~-~GIPV~gHiGLtPQ~~~~~GG~k~-----qGkt~~ea~~ll~  171 (269)
T 3ez4_A           98 TPADAFASAVKLMRAGAQMVKLEGGEWLAETVRFLVE-RAVPVCAHVGLTPQSVHAFGGFKV-----QGKTEAGAAQLLR  171 (269)
T ss_dssp             SHHHHHHHHHHHHHHTCSEEEEECSGGGHHHHHHHHH-TTCCEEEEEC-------------------------CHHHHHH
T ss_pred             CCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH-CCCEEEEEECCCCHHHHHCCCCCC-----CCCCHHHHHHHHH
T ss_conf             5599999999999549998983563669999999998-899388740467255543388632-----2789999999999


Q ss_pred             HHHHHHHHCCCEEEECH-HHHHHHHHHC
Q ss_conf             99999772699998201-8999999850
Q gi|255764463|r  310 SLLAFKRAGCDGIFTYF-AMEAARILTH  336 (337)
Q Consensus       310 ~l~~~kRAGAd~IitY~-A~~~a~~L~~  336 (337)
                      -...+-.|||-.|+-=. ..++|+++++
T Consensus       172 dA~~le~AGaf~ivlE~Vp~~la~~It~  199 (269)
T 3ez4_A          172 DARAVEEAGAQLIVLEAVPTLVAAEVTR  199 (269)
T ss_dssp             HHHHHHHHTCSEEEEESCCHHHHHHHHH
T ss_pred             HHHHHHHCCCCEEEECCCCHHHHHHHHH
T ss_conf             9999986022277642675778999984


No 87 
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthesis, lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=65.91  E-value=7.4  Score=18.80  Aligned_cols=115  Identities=12%  Similarity=0.031  Sum_probs=60.0

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCC
Q ss_conf             328899999999999988893676330256334554454215765379999999997301-4479861332710011431
Q gi|255764463|r   63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHD  141 (337)
Q Consensus        63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHc  141 (337)
                      .....+.+.+.++.+.+.|+..+.+++...+-       .+++.+ =-.+.++...+... .+-||.-+.-.        
T Consensus        17 ~~iD~~~l~~~i~~~~~~Gv~Gi~~~GttGE~-------~~Ls~~-Er~~~~~~~~~~~~~~~~vi~gv~~~--------   80 (292)
T 2ojp_A           17 GNVCRASLKKLIDYHVASGTSAIVSVGTTGES-------ATLNHD-EHADVVMMTLDLADGRIPVIAGTGAN--------   80 (292)
T ss_dssp             SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTG-------GGSCHH-HHHHHHHHHHHHHTTSSCEEEECCCS--------
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEECEECCHH-------HHCCHH-HHHHHHHHHHHHCCCCEEEEEECCCC--------
T ss_conf             78799999999999997699989968441016-------558999-99999999776518952599855889--------


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE---CCCC---CCCHHHHHHHHHHHCCCCCCCEECHHHHHH
Q ss_conf             001365446289999999999999962897352---4667---677999999999877885773003366643
Q gi|255764463|r  142 GILCDGEIVNDETIELISHAAVIQADAGADIIA---PSEM---MDGRVQEIRKKLDSHGHINVGIMPYVAKFN  208 (337)
Q Consensus       142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA---PSdM---MDGrV~aIR~~Ld~~g~~~~~ImsYsaKfa  208 (337)
                                  +.+...+.|....++|+|-|.   |.-.   -|+-+...+..-   ...+.+|+-|-.-..
T Consensus        81 ------------s~~~~i~~a~~a~~~Gad~v~~~~P~~~~~~~~~l~~~~~~i~---~~~~~pi~iYn~P~~  138 (292)
T 2ojp_A           81 ------------ATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIA---EHTDLPQILYNVPSR  138 (292)
T ss_dssp             ------------SHHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHH---TTCSSCEEEECCHHH
T ss_pred             ------------CHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHH---HHCCCCEEEEECCCC
T ss_conf             ------------8999999988898739964597478788989999999999986---107997899966864


No 88 
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=65.89  E-value=7.4  Score=18.79  Aligned_cols=104  Identities=18%  Similarity=0.180  Sum_probs=60.2

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCH------------HHHHHHHHHHHHCCCEEEECCCCC
Q ss_conf             89999999999998889367633025633455445421576537------------999999999730144798613327
Q gi|255764463|r   66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNL------------INEGICAIKKNIPNIGIITDVALD  133 (337)
Q Consensus        66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dgl------------v~rAIr~IK~~fpdl~vi~DVcLc  133 (337)
                      ....+.+.+..+.+|||++|-|-|+.+.... .   ..|++-++            ..+-|++++++  .|.||.||.+-
T Consensus        29 d~~g~~~~LdYlk~LGv~~I~L~Pv~~~~~~-~---~GY~~~d~~~vd~~~Gt~~dfk~lV~~~H~~--GI~VilDvV~N  102 (543)
T 2zic_A           29 DLKGITSKLDYLQKLGVMAIWLSPVYDSPMD-D---NGYDIANYEAIADIFGNMADMDNLLTQAKMR--GIKIIMDLVVN  102 (543)
T ss_dssp             CHHHHHHTHHHHHHHTCSEEEECCCEECCCT-T---TTSSCSEEEEECGGGCCHHHHHHHHHHHHTT--TCEEEEEECCS
T ss_pred             CHHHHHHHHHHHHHCCCCEEEECCCCCCCCC-C---CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEEEECCC
T ss_conf             9999998448998769988997977158988-9---9958557787572469999999999999988--89899997857


Q ss_pred             HHHC-----------------------------CCC-CC---------------CCC----CCCCCHHHHHHHHHHHHHH
Q ss_conf             1001-----------------------------143-10---------------013----6544628999999999999
Q gi|255764463|r  134 PFTI-----------------------------HGH-DG---------------ILC----DGEIVNDETIELISHAAVI  164 (337)
Q Consensus       134 ~YT~-----------------------------hGH-cG---------------i~~----~g~IdND~Tl~~L~k~Al~  164 (337)
                      ...+                             .+. ||               ...    +=...|.+..+.+.....-
T Consensus       103 Ht~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~~~~~~~~~~~~  182 (543)
T 2zic_A          103 HTSDEHAWFIEAREHPDSSERDYYIWCDQPNDLESIFGGSAWQYDDKSDQYYLHFFSKKQPDLNWENANLRQKIYDMMNF  182 (543)
T ss_dssp             BCCTTSHHHHHHHHCTTSGGGGGBCEESSCCSCBCTTSSBSEEEETTTTEEEECSSCTTSCBBCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             77286542222023765444453002689876556679986555555683442477776774367877999999999879


Q ss_pred             HHHCCCCEEEC
Q ss_conf             99628973524
Q gi|255764463|r  165 QADAGADIIAP  175 (337)
Q Consensus       165 ~A~AGaDivAP  175 (337)
                      ..+-|+|..--
T Consensus       183 ~~~~gvDGfR~  193 (543)
T 2zic_A          183 WIDKGIGGFRM  193 (543)
T ss_dssp             HHTTTCCEEEE
T ss_pred             HHHCCCCCEEE
T ss_conf             98739871331


No 89 
>1wx0_A Transaldolase; structural genomics, riken structural genomics/proteomics initiative, RSGI, transferas; 2.27A {Thermus thermophilus HB8} SCOP: c.1.10.1
Probab=65.47  E-value=5.6  Score=19.61  Aligned_cols=67  Identities=16%  Similarity=0.305  Sum_probs=37.6

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCC
Q ss_conf             89999999999998889367633025633455445421576537999999999730144798613327100114310013
Q gi|255764463|r   66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILC  145 (337)
Q Consensus        66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~  145 (337)
                      ..+.++++.+++..++=+-  +. +||-.           +.|+  +|++.+++.-  +-+-+-.|.             
T Consensus        71 ~~~~m~~~a~~l~~~~~nv--~I-KIP~t-----------~~G~--~a~~~L~~~G--i~vn~T~vf-------------  119 (223)
T 1wx0_A           71 EAEAMVAEGRRLAAIHPNI--VV-KLPTT-----------EEGL--KACKRLSAEG--IKVNMTLIF-------------  119 (223)
T ss_dssp             SHHHHHHHHHHHHHHCTTE--EE-EEESS-----------HHHH--HHHHHHHHTT--CCEEEEEEC-------------
T ss_pred             CHHHHHHHHHHHHHHCCCE--EE-EECCC-----------HHHH--HHHHHHHCCC--CCEEEEEEC-------------
T ss_conf             7899999999998637755--99-95477-----------8789--9999861159--652788975-------------


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCEEEC
Q ss_conf             654462899999999999999628973524
Q gi|255764463|r  146 DGEIVNDETIELISHAAVIQADAGADIIAP  175 (337)
Q Consensus       146 ~g~IdND~Tl~~L~k~Al~~A~AGaDivAP  175 (337)
                                  -..||+.-++|||++|+|
T Consensus       120 ------------s~~Qa~~A~~aga~yisp  137 (223)
T 1wx0_A          120 ------------SANQALLAARAGASYVSP  137 (223)
T ss_dssp             ------------SHHHHHHHHHTTCSEEEE
T ss_pred             ------------CHHHHHHHHHCCCCEEEE
T ss_conf             ------------899999999859929997


No 90 
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis}
Probab=65.44  E-value=7.5  Score=18.74  Aligned_cols=55  Identities=29%  Similarity=0.418  Sum_probs=40.0

Q ss_pred             HHHCCCCEEEECCCHH----------HHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             6640898799553114----------589999999624998999934618999999998889788999999999997726
Q gi|255764463|r  249 DIQESADMLLVKPGLP----------YLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAG  318 (337)
Q Consensus       249 D~~EGAD~lMVKPa~~----------yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAG  318 (337)
                      -.++|||++.+-|-.+          -++.++.+++.+.+|+.|-               |-++.+     .+..+..+|
T Consensus       126 a~~~gaDYi~~gpif~T~tK~~~~~~g~~~l~~~~~~~~~PvvAi---------------GGI~~~-----ni~~~~~~G  185 (221)
T 1yad_A          126 AEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRISIPVIAI---------------GGMTPD-----RLRDVKQAG  185 (221)
T ss_dssp             HHHTTCSEEEEECCC----------CHHHHHHHHHHHCCSCEEEE---------------SSCCGG-----GHHHHHHTT
T ss_pred             HHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE---------------CCCCHH-----HHHHHHHCC
T ss_conf             986599978306776666665310336788876400356767986---------------798999-----999999809


Q ss_pred             CCEEE
Q ss_conf             99998
Q gi|255764463|r  319 CDGIF  323 (337)
Q Consensus       319 Ad~Ii  323 (337)
                      |+.|-
T Consensus       186 a~gva  190 (221)
T 1yad_A          186 ADGIA  190 (221)
T ss_dssp             CSEEE
T ss_pred             CCEEE
T ss_conf             98899


No 91 
>3kts_A Glycerol uptake operon antiterminator regulatory protein; structural genomics, PSI-2, protein structure initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=65.37  E-value=7.5  Score=18.73  Aligned_cols=55  Identities=18%  Similarity=0.370  Sum_probs=45.0

Q ss_pred             HCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf             408987995531145899999996249989999346189999999988897889999999999977269999820
Q gi|255764463|r  251 QESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTY  325 (337)
Q Consensus       251 ~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY  325 (337)
                      .-..|.+=|=||.. -.+|+++++.++.|+.|               -|++..++-+.|+|    .|||..|=|-
T Consensus       125 ~~~PD~VEiLPG~~-p~~I~~i~~~~~~PiIA---------------GGLI~~kedV~~aL----~aGA~aVSTS  179 (192)
T 3kts_A          125 KVQPDCIELLPGII-PEQVQKMTQKLHIPVIA---------------GGLIETSEQVNQVI----ASGAIAVTTS  179 (192)
T ss_dssp             HHCCSEEEEECTTC-HHHHHHHHHHHCCCEEE---------------ESSCCSHHHHHHHH----TTTEEEEEEC
T ss_pred             HCCCCEEEECCHHH-HHHHHHHHHHCCCCEEE---------------ECCCCCHHHHHHHH----HCCCEEEECC
T ss_conf             47989999886678-99999999746999997---------------66728899999999----8599799879


No 92 
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=65.06  E-value=7.6  Score=18.69  Aligned_cols=111  Identities=19%  Similarity=0.166  Sum_probs=64.6

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC------CCCCCCC---------CHHHHHHHHHHHHHC-CCEE
Q ss_conf             32889999999999998889367633025633455445------4215765---------379999999997301-4479
Q gi|255764463|r   63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTG------SHIIDPD---------NLINEGICAIKKNIP-NIGI  126 (337)
Q Consensus        63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~G------seA~n~d---------glv~rAIr~IK~~fp-dl~v  126 (337)
                      +-|+-..+.+++..+.+|||.+|-|=|..+....+..+      -+.|++.         |-...--+.|++.-- .|-|
T Consensus        12 ~~w~f~~i~~kLdylk~LGv~~Iwl~Pi~~~~~~~~~~~~~~~~y~gY~~~dy~~vd~~~Gt~~d~~~Lv~~~H~~Gi~V   91 (422)
T 1ua7_A           12 WNWSFNTLKHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKV   91 (422)
T ss_dssp             TTBCHHHHHHTHHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHHHTTTCEE
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf             57779999996899997499989969884177766676666788653055337776857899999999999986458889


Q ss_pred             EECCCCCHH----------------HCCCCCCCCC----------------CCCCCHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             861332710----------------0114310013----------------6544628999999999999996289735
Q gi|255764463|r  127 ITDVALDPF----------------TIHGHDGILC----------------DGEIVNDETIELISHAAVIQADAGADII  173 (337)
Q Consensus       127 i~DVcLc~Y----------------T~hGHcGi~~----------------~g~IdND~Tl~~L~k~Al~~A~AGaDiv  173 (337)
                      |.|+-+-.-                -.|+.|.+-.                |=.-.|.+.-+.|.+.+.-..+-|+|-.
T Consensus        92 ilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lpDln~~n~~V~~~l~~~~~~W~~~giDGf  170 (422)
T 1ua7_A           92 IVDAVINHTTFDYAAISNEVKSIPNWTHGNTQIKNWSDRWDVTQNSLLGLYDWNTQNTQVQSYLKRFLERALNDGADGF  170 (422)
T ss_dssp             EEEECCSBCCSCTTTSCHHHHTSTTCEEECCBCCCTTCHHHHHHSBBTTBCEECTTSHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             EEEECCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEE
T ss_conf             9973048667877561003556764446888888888876663167578777477999999999999999997506757


No 93 
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=65.00  E-value=7.7  Score=18.68  Aligned_cols=44  Identities=20%  Similarity=0.232  Sum_probs=22.9

Q ss_pred             HHHHHHHHHCCCCEE----ECC---------CCCCCHHHHHHHHHHHCCCCCCCEEC
Q ss_conf             999999996289735----246---------67677999999999877885773003
Q gi|255764463|r  159 SHAAVIQADAGADII----APS---------EMMDGRVQEIRKKLDSHGHINVGIMP  202 (337)
Q Consensus       159 ~k~Al~~A~AGaDiv----APS---------dMMDGrV~aIR~~Ld~~g~~~~~Ims  202 (337)
                      .++|..+.++|||.|    +|-         .---+++.+|.+.-+...-.+++|++
T Consensus       156 ~e~a~~L~~aGAD~VkVGiG~Gs~CtTr~~tGvg~pq~sai~~~~~~~~~~~vpIIA  212 (361)
T 3khj_A          156 EEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIA  212 (361)
T ss_dssp             HHHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEE
T ss_pred             HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEE
T ss_conf             899999997199889973406855552003155783688999999986047887795


No 94 
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=63.84  E-value=8  Score=18.54  Aligned_cols=63  Identities=17%  Similarity=0.267  Sum_probs=36.3

Q ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECC
Q ss_conf             04888786328899999999999988893676330256334554454215765379999999997301-44798613
Q gi|255764463|r   55 SINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDV  130 (337)
Q Consensus        55 ~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DV  130 (337)
                      +++..-....-+.+.+.++++++.+.|.+.+-+-.+.....+|             .+.+++|++.+| ++-++.|.
T Consensus       133 ~v~~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d-------------~~~v~~ir~~~g~~~~l~vDa  196 (359)
T 1mdl_A          133 PVQAYDSHSLDGVKLATERAVTAAELGFRAVKTRIGYPALDQD-------------LAVVRSIRQAVGDDFGIMVDY  196 (359)
T ss_dssp             CEEEEEECCSCHHHHHHHHHHHHHHTTCSEEEEECCCSSHHHH-------------HHHHHHHHHHHCSSSEEEEEC
T ss_pred             CCCEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHH-------------HHHHHHHHHHCCCCCEEECCC
T ss_conf             4520102358999999999999998478814202467662889-------------999999998618882460164


No 95 
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=63.82  E-value=5.9  Score=19.43  Aligned_cols=67  Identities=18%  Similarity=0.318  Sum_probs=40.7

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCC
Q ss_conf             89999999999998889367633025633455445421576537999999999730144798613327100114310013
Q gi|255764463|r   66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILC  145 (337)
Q Consensus        66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~  145 (337)
                      ..+.++++.++...+|-+-+.   +||-.   +        .|  .+|++.+++.--.  +-+-.|.+            
T Consensus        74 ~~~em~~~a~~i~~~~~nv~V---KIP~t---~--------~g--l~ai~~L~~~Gi~--~n~Tavfs------------  123 (230)
T 1vpx_A           74 DYEGMVREARELAQISEYVVI---KIPMT---P--------DG--IKAVKTLSAEGIK--TNVTLVFS------------  123 (230)
T ss_dssp             SHHHHHHHHHHHHTTCTTEEE---EEESS---H--------HH--HHHHHHHHHTTCC--EEEEEECS------------
T ss_pred             HHHHHHHHHHHHHCCCCCEEE---EECCC---H--------HH--HHHHHHHHHCCCC--EEEEEECC------------
T ss_conf             789889999998604876189---80574---7--------78--9999996053995--68875067------------


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCEEEC
Q ss_conf             654462899999999999999628973524
Q gi|255764463|r  146 DGEIVNDETIELISHAAVIQADAGADIIAP  175 (337)
Q Consensus       146 ~g~IdND~Tl~~L~k~Al~~A~AGaDivAP  175 (337)
                                   ..||+.-|+|||++|+|
T Consensus       124 -------------~~Qa~~Aa~aga~yisp  140 (230)
T 1vpx_A          124 -------------PAQAILAAKAGATYVSP  140 (230)
T ss_dssp             -------------HHHHHHHHHHTCSEEEE
T ss_pred             -------------HHHHHHHHHCCCCEEEE
T ss_conf             -------------89999998648954877


No 96 
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=63.03  E-value=8.3  Score=18.44  Aligned_cols=111  Identities=13%  Similarity=0.168  Sum_probs=56.3

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCC
Q ss_conf             3288999999999999888936763302563345544542157653-799999999973014479861332710011431
Q gi|255764463|r   63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDN-LINEGICAIKKNIPNIGIITDVALDPFTIHGHD  141 (337)
Q Consensus        63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dg-lv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHc  141 (337)
                      .....+.+.+.++.+.+.|+..|.+++...+-.     +-+.++.- ++..+++..+.+   +-|++=|           
T Consensus        24 ~~iD~~~l~~~i~~l~~~Gv~gi~~~G~~GE~~-----~Ls~~Er~~~~~~~~~~~~~~---~~vi~gv-----------   84 (309)
T 3fkr_A           24 GDLDLASQKRAVDFMIDAGSDGLCILANFSEQF-----AITDDERDVLTRTILEHVAGR---VPVIVTT-----------   84 (309)
T ss_dssp             SSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGG-----GSCHHHHHHHHHHHHHHHTTS---SCEEEEC-----------
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEECEECCCHH-----HCCHHHHHHHHHHHHHHHCCC---CEEEEEC-----------
T ss_conf             795999999999999975999899783533346-----579999999999999871799---6089967-----------


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE--ECCCC-----C--CCHHHHHHHHHHHCCCCCCCEECHH
Q ss_conf             00136544628999999999999996289735--24667-----6--7799999999987788577300336
Q gi|255764463|r  142 GILCDGEIVNDETIELISHAAVIQADAGADII--APSEM-----M--DGRVQEIRKKLDSHGHINVGIMPYV  204 (337)
Q Consensus       142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv--APSdM-----M--DGrV~aIR~~Ld~~g~~~~~ImsYs  204 (337)
                           +...-+++    .+.|....++|+|.+  .|...     .  ++-+..-|+..+.   .+.+|+=|-
T Consensus        85 -----~~~s~~~~----i~~a~~a~~~G~d~~lv~pP~y~~~~~~~~~~i~~~~~~ia~~---~~lpiiiYn  144 (309)
T 3fkr_A           85 -----SHYSTQVC----AARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDA---IAIPIMVQD  144 (309)
T ss_dssp             -----CCSSHHHH----HHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHH---CSSCEEEEE
T ss_pred             -----CCCCHHHH----HHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHH---CCCCEEEEC
T ss_conf             -----87868999----9999997434998788548744567788999999999999722---488769851


No 97 
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=62.50  E-value=4.3  Score=20.35  Aligned_cols=71  Identities=25%  Similarity=0.333  Sum_probs=47.9

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-CEEEECCCCCHHHCCCCCCC
Q ss_conf             88999999999999888936763302563345544542157653799999999973014-47986133271001143100
Q gi|255764463|r   65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPN-IGIITDVALDPFTIHGHDGI  143 (337)
Q Consensus        65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpd-l~vi~DVcLc~YT~hGHcGi  143 (337)
                      .+.+..++.++.+.+-||+.+=+=      +.++.          -..+|+.|+++||+ +.|=+               
T Consensus        16 ~~~~~a~~~a~al~~~Gi~~iEit------l~tp~----------a~~~i~~l~~~~~~~~~vGa---------------   64 (212)
T 2v82_A           16 ITPDEALAHVGAVIDAGFDAVEIP------LNSPQ----------WEQSIPAIVDAYGDKALIGA---------------   64 (212)
T ss_dssp             CCHHHHHHHHHHHHHHTCCEEEEE------TTSTT----------HHHHHHHHHHHHTTTSEEEE---------------
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEEE------CCCCC----------HHHHHHHHHHHCCCCCEEEE---------------
T ss_conf             999999999999998699989995------79934----------99999999996687507853---------------


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCCCEE-ECC
Q ss_conf             136544628999999999999996289735-246
Q gi|255764463|r  144 LCDGEIVNDETIELISHAAVIQADAGADII-APS  176 (337)
Q Consensus       144 ~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv-APS  176 (337)
                         |.|.|-+       |+-..+++||+++ .|.
T Consensus        65 ---GTV~~~~-------~~~~a~~aGA~FivsP~   88 (212)
T 2v82_A           65 ---GTVLKPE-------QVDALARMGCQLIVTPN   88 (212)
T ss_dssp             ---ECCCSHH-------HHHHHHHTTCCEEECSS
T ss_pred             ---ECCCCHH-------HHHHHHHCCCCEEECCC
T ss_conf             ---0222478-------89999854897898998


No 98 
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structure initiative, nysgrc; 2.30A {Roseovarius nubinhibens ism} PDB: 3fvd_B
Probab=61.61  E-value=5.9  Score=19.43  Aligned_cols=77  Identities=17%  Similarity=0.161  Sum_probs=54.9

Q ss_pred             CCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             11666758988110488878632889999999999998889367633025633455445421576537999999999730
Q gi|255764463|r   42 LPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI  121 (337)
Q Consensus        42 ~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f  121 (337)
                      +|++--=|...+++|+.--.+...+.+...+++++..+.|-+.|-+..+...-.+|             .+.|+++++.+
T Consensus       121 ~pv~~llGg~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~G~~~~K~kvg~~~~~~d-------------~~~v~~ir~~~  187 (378)
T 2qdd_A          121 LPLWQLLGGEAATPVPINSSISTGTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQD-------------IARIEAISAGL  187 (378)
T ss_dssp             CBHHHHTTCSSCCCEEBEEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHH-------------HHHHHHHHHSC
T ss_pred             CCCEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCHHHH-------------HHHHHHHHHHC
T ss_conf             96202137776641025513457987888888888763476210356799998999-------------99999987646


Q ss_pred             C-CCEEEECCC
Q ss_conf             1-447986133
Q gi|255764463|r  122 P-NIGIITDVA  131 (337)
Q Consensus       122 p-dl~vi~DVc  131 (337)
                      | ++-++.|+-
T Consensus       188 g~~~~l~vDaN  198 (378)
T 2qdd_A          188 PDGHRVTFDVN  198 (378)
T ss_dssp             CTTCEEEEECT
T ss_pred             CCCCEEEECCC
T ss_conf             98775871267


No 99 
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative; 2.04A {Staphylococcus aureus}
Probab=61.56  E-value=5  Score=19.93  Aligned_cols=64  Identities=14%  Similarity=0.187  Sum_probs=48.1

Q ss_pred             CCHHHHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf             211478898888766408987995---53114589999999624-99899993461899999999888978
Q gi|255764463|r  236 PANVQEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN  302 (337)
Q Consensus       236 ~~n~~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d  302 (337)
                      ..|..||+..+..   .--|++.+   =|++.-+++++.+|+.. ..|+...-.+++-..+..|-+.|.-+
T Consensus        35 a~~g~eal~~~~~---~~pDlvllDi~mP~~~G~e~~~~ir~~~~~~~vI~lT~~~~~~~~~~a~~~Ga~~  102 (133)
T 3b2n_A           35 TDNGLDAMKLIEE---YNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDA  102 (133)
T ss_dssp             ESCHHHHHHHHHH---HCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSE
T ss_pred             ECCHHHHHHHHHH---CCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCE
T ss_conf             8999999999985---6999999957789998899999999868999689996789999999999879978


No 100
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino- acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; 1.45A {Staphylococcus aureus} PDB: 3di1_A 3di0_A
Probab=61.44  E-value=8.8  Score=18.26  Aligned_cols=117  Identities=13%  Similarity=0.194  Sum_probs=64.9

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCCC
Q ss_conf             28899999999999988893676330256334554454215765379999999997301-44798613327100114310
Q gi|255764463|r   64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHDG  142 (337)
Q Consensus        64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHcG  142 (337)
                      ....+.+.+.++.+.+.|++.+.+++...+-     -+-+..+.   .+.++...+..+ ..-|++-|.           
T Consensus        19 ~iD~~~~~~~i~~l~~~Gv~gl~~~GttGE~-----~~Ls~~Er---~~l~~~~~e~~~~~~pvi~gv~-----------   79 (292)
T 3daq_A           19 KVNLEALKAHVNFLLENNAQAIIVNGTTAES-----PTLTTDEK---ELILKTVIDLVDKRVPVIAGTG-----------   79 (292)
T ss_dssp             EECHHHHHHHHHHHHHTTCCEEEESSGGGTG-----GGSCHHHH---HHHHHHHHHHHTTSSCEEEECC-----------
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEECCHHHHH-----HHCCHHHH---HHHHHHHHHHCCCCCCEEECCC-----------
T ss_conf             7899999999999997799999978014446-----66899999---9999988885135686673367-----------


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCC---EEECCCCC---CCHHHHHHHHHHHCCCCCCCEECHHHHHHHHH
Q ss_conf             01365446289999999999999962897---35246676---77999999999877885773003366643543
Q gi|255764463|r  143 ILCDGEIVNDETIELISHAAVIQADAGAD---IIAPSEMM---DGRVQEIRKKLDSHGHINVGIMPYVAKFNSSF  211 (337)
Q Consensus       143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaD---ivAPSdMM---DGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~f  211 (337)
                               +.+.+.-.+.+....++|||   ++.|.-.-   ++-+...++.-|.   .+++|+=|-.-..+.+
T Consensus        80 ---------~~s~~~~i~~a~~a~~~Gad~v~v~pP~~~~~~~~~i~~~~~~va~~---~~~pi~lYn~p~~~g~  142 (292)
T 3daq_A           80 ---------TNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADA---VKLPVVLYNVPSRTNM  142 (292)
T ss_dssp             ---------CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH---HCSCEEEEECHHHHSC
T ss_pred             ---------CCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHC---CCCCEEEEECCCCCCC
T ss_conf             ---------88899999999999965999899945767889999999999999845---5998899978863578


No 101
>2qjj_A Mandelate racemase/muconate lactonizing enzyme; mannonate dehydratase, enolase superfamily, lyase; 1.80A {Novosphingobium aromaticivorans} PDB: 2qjn_A* 2qjm_A*
Probab=61.41  E-value=8.9  Score=18.26  Aligned_cols=93  Identities=17%  Similarity=0.268  Sum_probs=57.5

Q ss_pred             CCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC----------------
Q ss_conf             1166675898811048887863288999999999999888936763302563345544542157----------------
Q gi|255764463|r   42 LPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIID----------------  105 (337)
Q Consensus        42 ~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n----------------  105 (337)
                      .|++--=|...++.|+..--....+.+.+.+++++..+.|.+++-+=.+.+ ..|+..+.....                
T Consensus       103 ~Pl~~lLGg~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~G~~~~Kik~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (402)
T 2qjj_A          103 MPLYQLLGGRSRDGIMVYGHANGSDIAETVEAVGHYIDMGYKAIRAQTGVP-GIKDAYGVGRGKLYYEPADASLPSVTGW  181 (402)
T ss_dssp             SBHHHHHTCCSCSSEEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCT-TCSSCTTCSSCSSCCCCCCBSSCCEEEE
T ss_pred             CCHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCC-CCHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             960421787435664123125779989999999999977973688752775-1012321343320136554556554566


Q ss_pred             ----CCCHHHHHHHHHHHHHC-CCEEEECCCCCHHH
Q ss_conf             ----65379999999997301-44798613327100
Q gi|255764463|r  106 ----PDNLINEGICAIKKNIP-NIGIITDVALDPFT  136 (337)
Q Consensus       106 ----~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT  136 (337)
                          .-....+.++++++.++ ++.++.|. -+.||
T Consensus       182 ~~~~~l~~~~~~v~~ir~~~G~~~~l~vDa-N~~~~  216 (402)
T 2qjj_A          182 DTRKALNYVPKLFEELRKTYGFDHHLLHDG-HHRYT  216 (402)
T ss_dssp             CHHHHHTTHHHHHHHHHHHHCSSSEEEEEC-TTCSC
T ss_pred             CHHHHHHHHHHHHHHHHHHCCCHHEEECCC-CCCCC
T ss_conf             608889999999999998729601351342-23658


No 102
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=61.28  E-value=8.9  Score=18.24  Aligned_cols=80  Identities=25%  Similarity=0.319  Sum_probs=47.6

Q ss_pred             CCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCH----------
Q ss_conf             3311666758988110488878632889999999999998889367633025633455445421576537----------
Q gi|255764463|r   40 LILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNL----------  109 (337)
Q Consensus        40 LI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dgl----------  109 (337)
                      .||=+||..=.+..   .+-.|    .+..+.+.+..+.+|||++|-|-|+.+... +.   ..|++-++          
T Consensus        24 viYei~~~~F~~~~---~~~~G----d~~g~~~~Ldylk~LGv~~i~L~Pv~~~~~-~~---~GY~~~d~~~vd~~~Gt~   92 (570)
T 1m53_A           24 VFYQIYPRSFKDTN---DDGIG----DIRGIIEKLDYLKSLGIDAIWINPHYDSPN-TD---NGYDISNYRQIMKEYGTM   92 (570)
T ss_dssp             CEEEECGGGTCCSS---SSSSC----CHHHHHHTHHHHHHHTCCEEEECCCEECCC-TT---TTSSCSEEEEECGGGCCH
T ss_pred             EEEEEECCHHCCCC---CCCCC----CHHHHHHHHHHHHHCCCCEEEECCCCCCCC-CC---CCCCCCCCCCCCCCCCCH
T ss_conf             59999641523899---99865----999999843799875998899798888998-89---996756778737244999


Q ss_pred             --HHHHHHHHHHHHCCCEEEECCCC
Q ss_conf             --99999999973014479861332
Q gi|255764463|r  110 --INEGICAIKKNIPNIGIITDVAL  132 (337)
Q Consensus       110 --v~rAIr~IK~~fpdl~vi~DVcL  132 (337)
                        ..+.|++++++  .|.||.||.+
T Consensus        93 ~efk~lV~~aH~~--Gi~VilDvV~  115 (570)
T 1m53_A           93 EDFDSLVAEMKKR--NMRLMIDVVI  115 (570)
T ss_dssp             HHHHHHHHHHHHT--TCEEEEEECC
T ss_pred             HHHHHHHHHHHHC--CCEEEEEECC
T ss_conf             9999999999988--9989999667


No 103
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=61.27  E-value=8.9  Score=18.24  Aligned_cols=96  Identities=16%  Similarity=0.065  Sum_probs=53.4

Q ss_pred             HHHCCCCEEEE-------CCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC--------
Q ss_conf             87733116667-------589881104888786328899999999999988893676330256334554454--------
Q gi|255764463|r   37 VSDLILPIFLT-------SGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGS--------  101 (337)
Q Consensus        37 ~~dLI~PiFV~-------eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~Gs--------  101 (337)
                      .+-.||=|||.       +|......-+..+-..+=.+..+.+.+..+.+|||++|-|-|+.+...-+..|.        
T Consensus        82 ~~~viYei~v~~F~~~~~~g~~~~~~~~~~~~~~~G~~~Gi~~kLdYLk~LGvt~I~L~Pi~~~~~~~~~g~~~~gY~~~  161 (637)
T 1gjw_A           82 KRSVVYGSLPRTTAAYNHKGSGYYEENDVLGFREAGTFFKMMLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVK  161 (637)
T ss_dssp             GGCCEEEECHHHHTCCCTTSSSCCCSBCTTSCBCSCCHHHHHHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEE
T ss_pred             HCCEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf             16779999713632889998754455766686779689999984799997799789949875687746678679998766


Q ss_pred             --CCCCC---------CCH---HHHHHHHHHHHHCCCEEEECCCCCH
Q ss_conf             --21576---------537---9999999997301447986133271
Q gi|255764463|r  102 --HIIDP---------DNL---INEGICAIKKNIPNIGIITDVALDP  134 (337)
Q Consensus       102 --eA~n~---------dgl---v~rAIr~IK~~fpdl~vi~DVcLc~  134 (337)
                        .+.+|         -|-   ..+-|++++++  .|-||-||-+-.
T Consensus       162 dy~~~dp~~~~~~~~~~Gt~~dfk~lV~~~H~~--Gi~VIlDvV~NH  206 (637)
T 1gjw_A          162 NPMELDERYHDPLLEPFKVDEEFKAFVEACHIL--GIRVILDFIPRT  206 (637)
T ss_dssp             EEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHT--TCEEEEEECTTE
T ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEEEECCCC
T ss_conf             776568654565544688999999999999987--999999613455


No 104
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=60.98  E-value=9  Score=18.21  Aligned_cols=59  Identities=10%  Similarity=0.077  Sum_probs=37.7

Q ss_pred             HHHHHHHHHHHHHCCCCEEECCCCCCC----HH----HHHHHHHHHC-------CCCCCCEECHHHHHHHHHHC
Q ss_conf             999999999999628973524667677----99----9999999877-------88577300336664354301
Q gi|255764463|r  155 IELISHAAVIQADAGADIIAPSEMMDG----RV----QEIRKKLDSH-------GHINVGIMPYVAKFNSSFYG  213 (337)
Q Consensus       155 l~~L~k~Al~~A~AGaDivAPSdMMDG----rV----~aIR~~Ld~~-------g~~~~~ImsYsaKfaS~fYg  213 (337)
                      .+.+.+.+-...++|+|.|.-.|++-.    +|    .++|+.+...       -+.|+.=|+.+.=++.-..|
T Consensus       150 ~~~~~~~~~~~~~~G~d~I~l~DT~G~~~P~~v~~l~~~~~~~~~~~~~~~l~~H~Hn~~Gla~aN~l~A~~aG  223 (325)
T 3eeg_A          150 QAFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNG  223 (325)
T ss_dssp             HHHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCC
T ss_conf             99999999999985999999546656617506789999998751699873378885487461999999999839


No 105
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=60.44  E-value=5.4  Score=19.69  Aligned_cols=119  Identities=13%  Similarity=0.074  Sum_probs=63.7

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCC
Q ss_conf             8899999999999988893676330256334554454215765-379999999997301447986133271001143100
Q gi|255764463|r   65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPD-NLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGI  143 (337)
Q Consensus        65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~d-glv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi  143 (337)
                      .-.+.+.+.++.+.+.|++++.+++...+..     +-+.++- .++..++...+.   .+-|++-|.        +   
T Consensus        19 iD~~~l~~~i~~l~~~Gv~Gi~~~G~tGE~~-----~Ls~~Er~~l~~~~~~~~~~---~~~vi~gv~--------~---   79 (291)
T 3a5f_A           19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEAT-----TMTETERKETIKFVIDKVNK---RIPVIAGTG--------S---   79 (291)
T ss_dssp             BCHHHHHHHHHHHHHTTCCEEEESSGGGTGG-----GSCHHHHHHHHHHHHHHHTT---SSCEEEECC--------C---
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEECCCCHHHH-----HCCHHHHHHHHHHHHHHCCC---CCEEEEEEC--------C---
T ss_conf             0999999999999977999999890011165-----69999999999999986476---653898767--------8---


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCCCEE--ECCCCCCCHHHHHHHHHHH-CCCCCCCEECHHHHHHHHH
Q ss_conf             136544628999999999999996289735--2466767799999999987-7885773003366643543
Q gi|255764463|r  144 LCDGEIVNDETIELISHAAVIQADAGADII--APSEMMDGRVQEIRKKLDS-HGHINVGIMPYVAKFNSSF  211 (337)
Q Consensus       144 ~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv--APSdMMDGrV~aIR~~Ld~-~g~~~~~ImsYsaKfaS~f  211 (337)
                               .+.+...+.|....++|||.|  .|.-..-..-..|.+-... ..-.+.+|+-|-.-..+.+
T Consensus        80 ---------~s~~~~i~~a~~a~~~Gad~i~v~pP~~~~~~~~~i~~~f~~i~~~~~~pi~iYn~P~~~~~  141 (291)
T 3a5f_A           80 ---------NNTAASIAMSKWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGL  141 (291)
T ss_dssp             ---------SSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSC
T ss_pred             ---------CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             ---------51999999999999708997998188778899999999999998513798899957874577


No 106
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris}
Probab=60.08  E-value=9.3  Score=18.10  Aligned_cols=118  Identities=14%  Similarity=0.153  Sum_probs=63.6

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCC
Q ss_conf             32889999999999998889367633025633455445421576537999999999730144798613327100114310
Q gi|255764463|r   63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDG  142 (337)
Q Consensus        63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcG  142 (337)
                      .....+.+.+.++.+.+.|+..|.+++...+-       .+++.+- -.+.++...+..+..-||.-|.           
T Consensus        24 g~iD~~~l~~~i~~li~~Gv~Gi~v~GstGE~-------~~Ls~eE-r~~l~~~~~~~~~~~~vi~gv~-----------   84 (313)
T 3dz1_A           24 GKIDDVSIDRLTDFYAEVGCEGVTVLGILGEA-------PKLDAAE-AEAVATRFIKRAKSMQVIVGVS-----------   84 (313)
T ss_dssp             SCBCHHHHHHHHHHHHHTTCSEEEESTGGGTG-------GGSCHHH-HHHHHHHHHHHCTTSEEEEECC-----------
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEEEECCCH-------HHCCHHH-HHHHHHHHHHHCCCCCEEEECC-----------
T ss_conf             59499999999999997599989975576662-------3389999-9999999998659976899626-----------


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCC--EEECCCCC---CCHHHHHHHHHHHCCCCCCCEECHHHHHHH
Q ss_conf             01365446289999999999999962897--35246676---779999999998778857730033666435
Q gi|255764463|r  143 ILCDGEIVNDETIELISHAAVIQADAGAD--IIAPSEMM---DGRVQEIRKKLDSHGHINVGIMPYVAKFNS  209 (337)
Q Consensus       143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaD--ivAPSdMM---DGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS  209 (337)
                           .    .+.+...+.|...+++|+|  +|.|.--.   ++-+..-++..+..+ .+++|+=|-....+
T Consensus        85 -----~----~st~~ai~la~~a~~~Gad~i~v~pP~~~~~~~~~~~~f~~i~~a~~-~~~Pi~iYn~P~~~  146 (313)
T 3dz1_A           85 -----A----PGFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIG-DDVPWVLQDYPLTL  146 (313)
T ss_dssp             -----C----SSHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHC-TTSCEEEEECHHHH
T ss_pred             -----C----CCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHC-CCCCEEEECCCCCC
T ss_conf             -----5----10489999999998659856753100001564477899999998512-57736874376425


No 107
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=59.61  E-value=9.5  Score=18.05  Aligned_cols=93  Identities=9%  Similarity=0.023  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCC--CCCC
Q ss_conf             99999999998889367633025633455445421576537999999999730144798613327100114310--0136
Q gi|255764463|r   69 VAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDG--ILCD  146 (337)
Q Consensus        69 ~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcG--i~~~  146 (337)
                      .+.+.++++.++|+++|-+|..-|..-+...    ++++.  ...+|...+.+. +.      ..+.+.|+..-  +...
T Consensus        13 gl~~a~~~a~~~G~~~~qif~~~p~~w~~~~----~~~~~--~~~~r~~~~~~~-l~------~~~~~~h~py~~nl~s~   79 (285)
T 1qtw_A           13 GLANAAIRAAEIDATAFALFTKNQRQWRAAP----LTTQT--IDEFKAACEKYH-YT------SAQILPHDSYLINLGHP   79 (285)
T ss_dssp             CHHHHHHHHHHTTCSEEECCSSCSSCSSCCC----CCHHH--HHHHHHHHHHTT-CC------GGGBCCBCCTTCCTTCS
T ss_pred             CHHHHHHHHHHCCCCEEEEECCCCCCCCCCC----CCHHH--HHHHHHHHHHCC-CC------CCEEEEECCCCCCCCCC
T ss_conf             7999999999749999999789977778899----99999--999999999829-99------73599847865564788


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             5446289999999999999962897352
Q gi|255764463|r  147 GEIVNDETIELISHAAVIQADAGADIIA  174 (337)
Q Consensus       147 g~IdND~Tl~~L~k~Al~~A~AGaDivA  174 (337)
                      ..-....+++.+.+.--.-++-||..|.
T Consensus        80 ~~~~r~~si~~~~~~l~~a~~LGa~~vv  107 (285)
T 1qtw_A           80 VTEALEKSRDAFIDEMQRCEQLGLSLLN  107 (285)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             8799999999999999999980886547


No 108
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, dahps, DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=59.38  E-value=9.6  Score=18.02  Aligned_cols=78  Identities=10%  Similarity=0.042  Sum_probs=49.5

Q ss_pred             CEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf             16667589881104888786328899999999999988893676330256334554454215765379999999997301
Q gi|255764463|r   43 PIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP  122 (337)
Q Consensus        43 PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp  122 (337)
                      ++|+.-|..+-|           |.+.+.+.++.+.+.|.+  ++|+.+=+..-+..+-....+++  .+-++.+|++| 
T Consensus        23 ~~~lIAGPC~iE-----------s~e~~~~iA~~lk~~~~~--~~~~~~fK~Rts~~s~~g~g~~g--l~~l~~ik~~~-   86 (262)
T 1zco_A           23 GFTIIAGPCSIE-----------SREQIMKVAEFLAEVGIK--VLRGGAFKPRTSPYSFQGYGEKA--LRWMREAADEY-   86 (262)
T ss_dssp             SCEEEEECSBCC-----------CHHHHHHHHHHHHHTTCC--EEECBSSCCCSSTTSCCCCTHHH--HHHHHHHHHHH-
T ss_pred             CCEEEEECCCCC-----------CHHHHHHHHHHHHHHHHH--EECCCCCCCCCCCCCCCCCHHHH--HHHHHHHHHHC-
T ss_conf             857998677116-----------999999999999996242--04365335768843256761588--99999877654-


Q ss_pred             CCEEEECCCCCHHH
Q ss_conf             44798613327100
Q gi|255764463|r  123 NIGIITDVALDPFT  136 (337)
Q Consensus       123 dl~vi~DVcLc~YT  136 (337)
                      ++-|+|||.-...-
T Consensus        87 glpv~TdVh~~~q~  100 (262)
T 1zco_A           87 GLVTVTEVMDTRHV  100 (262)
T ss_dssp             TCEEEEECCCGGGH
T ss_pred             CCEEEEECCCHHHH
T ss_conf             97279852847777


No 109
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=59.37  E-value=6.3  Score=19.26  Aligned_cols=132  Identities=17%  Similarity=0.233  Sum_probs=76.5

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCC
Q ss_conf             89999999999998889367633025633455445421576537999999999730144798613327100114310013
Q gi|255764463|r   66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILC  145 (337)
Q Consensus        66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~  145 (337)
                      +.+.+.+.++.+.+.||+.+=+--      .++        +  ..++|+.++++||++.|=+                 
T Consensus        27 ~~~~~~~~~~al~~~Gi~~iEITl------~t~--------~--a~~~i~~l~~~~p~~~vGa-----------------   73 (224)
T 1vhc_A           27 NADDILPLADTLAKNGLSVAEITF------RSE--------A--AADAIRLLRANRPDFLIAA-----------------   73 (224)
T ss_dssp             SGGGHHHHHHHHHHTTCCEEEEET------TST--------T--HHHHHHHHHHHCTTCEEEE-----------------
T ss_pred             CHHHHHHHHHHHHHCCCCEEEEEC------CCC--------H--HHHHHHHHHHHCCCEEEEE-----------------
T ss_conf             999999999999987998899968------980--------3--9999999998689918962-----------------


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCC
Q ss_conf             65446289999999999999962897352466767799999999987788577300336664354301016753102446
Q gi|255764463|r  146 DGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLL  225 (337)
Q Consensus       146 ~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~  225 (337)
                       |-|.|-++       +-...+|||+++---.+-+.-+..-+    +++   ++.+                     |  
T Consensus        74 -GTVl~~~~-------~~~a~~aGA~FivSP~~~~~v~~~a~----~~~---i~~i---------------------P--  115 (224)
T 1vhc_A           74 -GTVLTAEQ-------VVLAKSSGADFVVTPGLNPKIVKLCQ----DLN---FPIT---------------------P--  115 (224)
T ss_dssp             -ESCCSHHH-------HHHHHHHTCSEEECSSCCHHHHHHHH----HTT---CCEE---------------------C--
T ss_pred             -ECCCCHHH-------HHHHHHHCCCEEECCCCCHHHHHHHH----HCC---CCCC---------------------C--
T ss_conf             -02045799-------99999837998972789999999998----569---9845---------------------8--


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHH--HHHHHHHHHHC-CCCEE
Q ss_conf             7777443157211478898888766408987995531145--89999999624-99899
Q gi|255764463|r  226 KGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPY--LDVCFRIKEKF-GLPTF  281 (337)
Q Consensus       226 ~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~y--LDii~~~k~~~-~~P~~  281 (337)
                       |        .....    |+..=.+-|+|++=+=||-.+  ...|+.++.-+ ++|..
T Consensus       116 -G--------~~Tps----Ei~~A~~~G~~~vKlFPA~~~gG~~~lkal~~p~p~~~f~  161 (224)
T 1vhc_A          116 -G--------VNNPM----AIEIALEMGISAVKFFPAEASGGVKMIKALLGPYAQLQIM  161 (224)
T ss_dssp             -E--------ECSHH----HHHHHHHTTCCEEEETTTTTTTHHHHHHHHHTTTTTCEEE
T ss_pred             -C--------CCCHH----HHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCCCEEE
T ss_conf             -8--------58879----9999998599968876521125899998565345687188


No 110
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling, bifunctional enzyme; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=59.14  E-value=9.7  Score=18.00  Aligned_cols=25  Identities=16%  Similarity=0.146  Sum_probs=16.0

Q ss_pred             HHHHHHHHHHHHCCCCEEECCCCCC
Q ss_conf             9999999999962897352466767
Q gi|255764463|r  156 ELISHAAVIQADAGADIIAPSEMMD  180 (337)
Q Consensus       156 ~~L~k~Al~~A~AGaDivAPSdMMD  180 (337)
                      +.+.+.+-...++|+|+|.-.|+.-
T Consensus       149 ~~~~~~~~~~~~~g~~~i~l~DT~G  173 (345)
T 1nvm_A          149 EKLAEQGKLMESYGATCIYMADSGG  173 (345)
T ss_dssp             HHHHHHHHHHHHHTCSEEEEECTTC
T ss_pred             HHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             5677899999843970466235334


No 111
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=59.08  E-value=4.8  Score=20.05  Aligned_cols=154  Identities=18%  Similarity=0.205  Sum_probs=86.9

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEECCCCCHHHCCCCCCC
Q ss_conf             889999999999998889367633025633455445421576537999999999730-1447986133271001143100
Q gi|255764463|r   65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI-PNIGIITDVALDPFTIHGHDGI  143 (337)
Q Consensus        65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f-pdl~vi~DVcLc~YT~hGHcGi  143 (337)
                      -+.+.+.+.++.+.+-|++.+=+=      ..++.   +       .++|+.+++.+ |++.|=                
T Consensus        19 ~~~~~a~~~~~al~~~Gi~~iEit------l~~p~---a-------~~~I~~l~~~~~~~~~vG----------------   66 (205)
T 1wa3_A           19 NSVEEAKEKALAVFEGGVHLIEIT------FTVPD---A-------DTVIKELSFLKEKGAIIG----------------   66 (205)
T ss_dssp             SSHHHHHHHHHHHHHTTCCEEEEE------TTSTT---H-------HHHHHHTHHHHHTTCEEE----------------
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEEE------CCCCC---H-------HHHHHHHHHHCCCCEEEE----------------
T ss_conf             899999999999998799889996------89976---8-------999999997318982896----------------


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCCC-EEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCC
Q ss_conf             1365446289999999999999962897-352466767799999999987788577300336664354301016753102
Q gi|255764463|r  144 LCDGEIVNDETIELISHAAVIQADAGAD-IIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTR  222 (337)
Q Consensus       144 ~~~g~IdND~Tl~~L~k~Al~~A~AGaD-ivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~  222 (337)
                        =|.|.|       .+|+-...+|||| +|.|.  .|                 -.++.|+.++ .-            
T Consensus        67 --aGTV~~-------~~~~~~a~~aGa~fivsP~--~~-----------------~~v~~~~~~~-~~------------  105 (205)
T 1wa3_A           67 --AGTVTS-------VEQCRKAVESGAEFIVSPH--LD-----------------EEISQFCKEK-GV------------  105 (205)
T ss_dssp             --EESCCS-------HHHHHHHHHHTCSEEECSS--CC-----------------HHHHHHHHHH-TC------------
T ss_pred             --EECCCC-------HHHHHHHHHCCCCEEECCC--CC-----------------HHHHHHHHHC-CC------------
T ss_conf             --300012-------7889999864874886799--99-----------------9999999983-99------------


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHH-HHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCC
Q ss_conf             4467777443157211478898888766408987995531145-89999999624-998999934618999999998889
Q gi|255764463|r  223 DLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPY-LDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGW  300 (337)
Q Consensus       223 p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~y-LDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~  300 (337)
                      |        |=--..+..|++..    .+.|+|++-+=|+-.. ...++.++.-+ ++|+.+               .|-
T Consensus       106 ~--------~iPGv~TptEi~~A----~~~G~~~vK~FPa~~~G~~~lk~l~~p~p~i~~ip---------------tGG  158 (205)
T 1wa3_A          106 F--------YMPGVMTPTELVKA----MKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVP---------------TGG  158 (205)
T ss_dssp             E--------EECEECSHHHHHHH----HHTTCCEEEETTHHHHHHHHHHHHHTTCTTCEEEE---------------BSS
T ss_pred             C--------CCCCCCCCHHHHHH----HHCCCCEEEECCHHHCCHHHHHHHHCCCCCCCEEE---------------ECC
T ss_conf             8--------22774871589999----97699979745121047889999866589984886---------------469


Q ss_pred             CCHHHHHHHHHHHHHHHCCCEEE
Q ss_conf             78899999999999772699998
Q gi|255764463|r  301 INKNDAMMESLLAFKRAGCDGIF  323 (337)
Q Consensus       301 ~d~~~~~~E~l~~~kRAGAd~Ii  323 (337)
                      ++.+     .+..+.+|||+.+-
T Consensus       159 V~~~-----n~~~~l~aGa~avg  176 (205)
T 1wa3_A          159 VNLD-----NVCEWFKAGVLAVG  176 (205)
T ss_dssp             CCTT-----THHHHHHHTCSCEE
T ss_pred             CCHH-----HHHHHHHCCCEEEE
T ss_conf             9889-----99999988992999


No 112
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=58.49  E-value=9.9  Score=17.92  Aligned_cols=92  Identities=16%  Similarity=0.194  Sum_probs=62.1

Q ss_pred             CCHHHHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC---HH---H
Q ss_conf             211478898888766408987995---53114589999999624-99899993461899999999888978---89---9
Q gi|255764463|r  236 PANVQEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN---KN---D  305 (337)
Q Consensus       236 ~~n~~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d---~~---~  305 (337)
                      ..|..+|+....   +...|++.+   -|++.-+++++.+|+.. ..|+..+-.+.+-..+..|-+.|.-+   .+   .
T Consensus        37 a~~~~eal~~~~---~~~pDlvllDi~mP~~~G~e~~~~ir~~~~~~~iivlt~~~~~~~~~~al~~Ga~~yl~Kp~~~~  113 (153)
T 3cz5_A           37 AADAGEAYRLYR---ETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQGSAFALKAFEAGASGYVTKSSDPA  113 (153)
T ss_dssp             ESSHHHHHHHHH---TTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHHHTTCSEEEETTSCTT
T ss_pred             ECCHHHHHHHHH---CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCCCEEEECCCCHH
T ss_conf             899999999975---46996899964579987899999999858999689998148999999999869983896899999


Q ss_pred             HHHHHHHHHHHHCCCEEEECHHHHHHHHHH
Q ss_conf             999999999772699998201899999985
Q gi|255764463|r  306 AMMESLLAFKRAGCDGIFTYFAMEAARILT  335 (337)
Q Consensus       306 ~~~E~l~~~kRAGAd~IitY~A~~~a~~L~  335 (337)
                      .+.+++....+ |-    +|+.+++++-|.
T Consensus       114 ~L~~ai~~v~~-g~----~~~~~~~~~~l~  138 (153)
T 3cz5_A          114 ELVQAIEAILA-GR----RAMSPDIAQEIA  138 (153)
T ss_dssp             HHHHHHHHHTT-TC----CEECHHHHHHHH
T ss_pred             HHHHHHHHHHC-CC----CCCCHHHHHHHH
T ss_conf             99999999984-99----779989999999


No 113
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for structural genomics, JCSG; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A*
Probab=57.46  E-value=10  Score=17.81  Aligned_cols=62  Identities=10%  Similarity=0.091  Sum_probs=39.7

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCC
Q ss_conf             8999999999999888936763302563345544542157653799999999973014479861332
Q gi|255764463|r   66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVAL  132 (337)
Q Consensus        66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcL  132 (337)
                      |.+.+.+.++.+.++|++  ++|+++=+..-++..-....++|+  +-++.+|++| ++-|+|||.-
T Consensus       118 s~e~~~~~A~~lk~~g~~--~~r~g~fKpRTsp~sfqG~Ge~GL--~iL~~vk~~~-glpiiTdVh~  179 (350)
T 1vr6_A          118 GREMLMETAHFLSELGVK--VLRGGAYKPRTSPYSFQGLGEKGL--EYLREAADKY-GMYVVTEALG  179 (350)
T ss_dssp             CHHHHHHHHHHHHHTTCC--EEECBSCCCCCSTTSCCCCTHHHH--HHHHHHHHHH-TCEEEEECSS
T ss_pred             CHHHHHHHHHHHHHHCCC--CCCCCEECCCCCCCCCCCCCHHHH--HHHHHHHHHC-CCCEEEEECC
T ss_conf             899999999998983410--134663015678733567608899--9999999865-9806898433


No 114
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=57.07  E-value=10  Score=17.77  Aligned_cols=96  Identities=15%  Similarity=0.149  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCC
Q ss_conf             99999999999888936763302563345544542157653799999999973014479861332710011431001365
Q gi|255764463|r   68 DVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDG  147 (337)
Q Consensus        68 d~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g  147 (337)
                      +.-.+.++.+.+.|+..+.    |+-.       +.+  ..-+..+++.||+.||++.||+--+-.              
T Consensus       254 ~~~~era~aLv~aG~d~iv----iD~A-------hg~--s~~v~~~ik~ik~~~~~~~iiaGNVaT--------------  306 (514)
T 1jcn_A          254 EDDKYRLDLLTQAGVDVIV----LDSS-------QGN--SVYQIAMVHYIKQKYPHLQVIGGNVVT--------------  306 (514)
T ss_dssp             TTHHHHHHHHHHTTCSEEE----ECCS-------CCC--SHHHHHHHHHHHHHCTTCEEEEEEECS--------------
T ss_pred             HHHHHHHHHHHHCCCCEEE----EECC-------CCC--HHHHHHHHHHHHHHCCCCEEEEEEECC--------------
T ss_conf             5279999999853897799----6234-------512--778999999999768997188631236--------------


Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCEE---------ECCCCCC----CHHHHHHHHHHHCCCCCCCEE
Q ss_conf             44628999999999999996289735---------2466767----799999999987788577300
Q gi|255764463|r  148 EIVNDETIELISHAAVIQADAGADII---------APSEMMD----GRVQEIRKKLDSHGHINVGIM  201 (337)
Q Consensus       148 ~IdND~Tl~~L~k~Al~~A~AGaDiv---------APSdMMD----GrV~aIR~~Ld~~g~~~~~Im  201 (337)
                                 .+.+..+.+||||.|         |..-..-    .+..+|.+.-+.....+++|.
T Consensus       307 -----------~~~~~~L~~aGad~vkVGiG~Gs~CtTr~~~GvG~pq~sai~~~a~~~~~~~v~iI  362 (514)
T 1jcn_A          307 -----------AAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPII  362 (514)
T ss_dssp             -----------HHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEE
T ss_pred             -----------HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf             -----------99999999838888986034676656755223478589999999999997599289


No 115
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, structural genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=56.74  E-value=11  Score=17.73  Aligned_cols=130  Identities=18%  Similarity=0.235  Sum_probs=67.6

Q ss_pred             CCCCCCHHHHHHHHHHHCCCCC--------CCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             6676779999999998778857--------73003366643543010167531024467777443157211478898888
Q gi|255764463|r  176 SEMMDGRVQEIRKKLDSHGHIN--------VGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREAS  247 (337)
Q Consensus       176 SdMMDGrV~aIR~~Ld~~g~~~--------~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~  247 (337)
                      .+-.+|.+..+-+.|...+..+        +.|.|++...-       +..-.-.|..   ...|-++............
T Consensus       143 ~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~v~i~sf~~~~l-------~~~~~~~p~~---~~~~l~~~~~~~~~~~~~~  212 (287)
T 2oog_A          143 PDVYPGMEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESL-------KKIHRQNKHV---PLVKLVDKGELQQFNDQRL  212 (287)
T ss_dssp             TTTSTTHHHHHHHHHHHTTCSSHHHHHTTSEEEEESCHHHH-------HHHHHHCTTS---CEEEEECTTTGGGCCHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHH-------HHHHHHCCCC---CEEEEECCCCHHHHHHHHH
T ss_conf             86565337899999999766642035665257714999999-------9999868998---6899944542124467888


Q ss_pred             HHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHH
Q ss_conf             76640898799553114589999999624998999934618999999998889788999999999997726999982018
Q gi|255764463|r  248 IDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFA  327 (337)
Q Consensus       248 ~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A  327 (337)
                      ..+...++.+-+-=.+-.-+.|..+++. +++|.+|-|                |.+..    +.-+.+.|+|.|+|=+-
T Consensus       213 ~~i~~~~~~v~~~~~~~~~~~v~~~~~~-G~~V~vwTV----------------n~~~~----~~~l~~~GVdgIiTD~P  271 (287)
T 2oog_A          213 KEIRSYAIGLGPDYTDLTEQNTHHLKDL-GFIVHPYTV----------------NEKAD----MLRLNKYGVDGVFTNFA  271 (287)
T ss_dssp             HHHHTTCSEEEEBGGGCCHHHHHHHHHT-TCEECCBCC----------------CSHHH----HHHHHHHTCSEEEESCH
T ss_pred             HHHHHHHEEEECCHHHCCHHHHHHHHHC-CCEEEEECC----------------CCHHH----HHHHHHCCCCEEEECCH
T ss_conf             8865200133122412899999999987-999999808----------------99999----99998669999998869


Q ss_pred             HHHHHHHHC
Q ss_conf             999999850
Q gi|255764463|r  328 MEAARILTH  336 (337)
Q Consensus       328 ~~~a~~L~~  336 (337)
                      ..+.++|+|
T Consensus       272 ~~~~~~lke  280 (287)
T 2oog_A          272 DKYKEVIKE  280 (287)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHHC
T ss_conf             999999970


No 116
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus HB8} PDB: 2yw4_A
Probab=55.91  E-value=6.5  Score=19.15  Aligned_cols=38  Identities=18%  Similarity=0.215  Sum_probs=22.1

Q ss_pred             HHHHHHHCCCCEEEECCCHHH--HHHHHHHHHHC-CCCEEE
Q ss_conf             888766408987995531145--89999999624-998999
Q gi|255764463|r  245 EASIDIQESADMLLVKPGLPY--LDVCFRIKEKF-GLPTFA  282 (337)
Q Consensus       245 e~~~D~~EGAD~lMVKPa~~y--LDii~~~k~~~-~~P~~a  282 (337)
                      |+..=.+-|++++=+=||-..  ...++.++.-| .+|..+
T Consensus       116 Ei~~A~~~G~~~vK~FPA~~~Gg~~~lk~l~~p~p~i~f~p  156 (207)
T 2yw3_A          116 EVERALALGLSALKFFPAEPFQGVRVLRAYAEVFPEVRFLP  156 (207)
T ss_dssp             HHHHHHHTTCCEEEETTTTTTTHHHHHHHHHHHCTTCEEEE
T ss_pred             HHHHHHHCCCCEEEECHHHHCCCHHHHHHHHCCCCCCCEEE
T ss_conf             99999976999798660331378999976534899880897


No 117
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=55.89  E-value=11  Score=17.64  Aligned_cols=74  Identities=16%  Similarity=0.086  Sum_probs=49.3

Q ss_pred             CHHHHHHHHHHHHHCC-CEEEECCCCCHHHCCCCCCCCC--------------CC---CCCHHHHHHHHHHHHHHHHHCC
Q ss_conf             3799999999973014-4798613327100114310013--------------65---4462899999999999999628
Q gi|255764463|r  108 NLINEGICAIKKNIPN-IGIITDVALDPFTIHGHDGILC--------------DG---EIVNDETIELISHAAVIQADAG  169 (337)
Q Consensus       108 glv~rAIr~IK~~fpd-l~vi~DVcLc~YT~hGHcGi~~--------------~g---~IdND~Tl~~L~k~Al~~A~AG  169 (337)
                      ..+..|++.+|++.|+ .-++. -|-.|+|--+|.--..              +-   .-.-+...+.+.+.+..|.+||
T Consensus       132 ~~v~eai~~~~~~l~~~vpliG-f~ggP~Tla~yli~~~~~~~~~~~~~~~~~~p~~~~~ll~~~t~~~~~~~~~qi~aG  210 (367)
T 1r3s_A          132 GYVFQAITLTRQRLAGRVPLIG-FAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAG  210 (367)
T ss_dssp             HHHHHHHHHHHHHHTTSSCEEE-EEECHHHHHHHHHHSSCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHCCCCCCEE-EECCHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             6999999999987078787143-505507899999626652026789999862878899999999999999999998448


Q ss_pred             CCEEECCCCCCCH
Q ss_conf             9735246676779
Q gi|255764463|r  170 ADIIAPSEMMDGR  182 (337)
Q Consensus       170 aDivAPSdMMDGr  182 (337)
                      ||+|.--|..-|.
T Consensus       211 ad~i~ifds~a~~  223 (367)
T 1r3s_A          211 AQALQLFESHAGH  223 (367)
T ss_dssp             CSEEEEEETTGGG
T ss_pred             CCEEEECCCHHCC
T ss_conf             9667851530200


No 118
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, structural genomics, NPPSFA; 1.60A {Pyrococcus horikoshii OT3} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=55.52  E-value=11  Score=17.60  Aligned_cols=79  Identities=28%  Similarity=0.273  Sum_probs=41.0

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCC
Q ss_conf             88999999999999888936763302563345544542157653799999999973014479861332710011431001
Q gi|255764463|r   65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGIL  144 (337)
Q Consensus        65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~  144 (337)
                      .+++.+++-++++.+ .|-.+    .+.-..        +...|+  +.|+.+|+. ++..|+.|.=++           
T Consensus         9 ~~~~~al~i~~~~~~-~i~~i----Kig~~l--------~~~~G~--~~i~~l~~~-~~~~i~~D~K~~-----------   61 (208)
T 2czd_A            9 YEGERAIKIAKSVKD-YISMI----KVNWPL--------ILGSGV--DIIRRLKEE-TGVEIIADLKLA-----------   61 (208)
T ss_dssp             CSHHHHHHHHHHHGG-GCSEE----EEEHHH--------HHHHCT--THHHHHHHH-HCCEEEEEEEEC-----------
T ss_pred             CCHHHHHHHHHHHCC-CCEEE----EECHHH--------HHHCCH--HHHHHHHHC-CCCEEEEEEECC-----------
T ss_conf             999999999998378-66099----988999--------974398--999999865-798299875201-----------


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC
Q ss_conf             3654462899999999999999628973524667
Q gi|255764463|r  145 CDGEIVNDETIELISHAAVIQADAGADIIAPSEM  178 (337)
Q Consensus       145 ~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdM  178 (337)
                           |-..|++..   +-..+++|||++-=...
T Consensus        62 -----Dig~t~~~~---~~~~~~~gad~~Tvh~~   87 (208)
T 2czd_A           62 -----DIPNTNRLI---ARKVFGAGADYVIVHTF   87 (208)
T ss_dssp             -----SCHHHHHHH---HHHHHHTTCSEEEEEST
T ss_pred             -----CCCCHHHHH---HHHHHHCCCCEEEEECC
T ss_conf             -----357509999---99976169988997402


No 119
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=55.44  E-value=11  Score=17.59  Aligned_cols=73  Identities=15%  Similarity=0.150  Sum_probs=50.3

Q ss_pred             HHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCC---C-----------CC---CCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             799999999973014479861332710011431001---3-----------65---446289999999999999962897
Q gi|255764463|r  109 LINEGICAIKKNIPNIGIITDVALDPFTIHGHDGIL---C-----------DG---EIVNDETIELISHAAVIQADAGAD  171 (337)
Q Consensus       109 lv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~---~-----------~g---~IdND~Tl~~L~k~Al~~A~AGaD  171 (337)
                      .+.++|+.+|+..++-.-+.-.|-.|+|.-++.---   .           +.   .-.-+...+.+.+.+..|.++|||
T Consensus       129 ~~~~ai~~lk~~l~~~vplig~~ggP~Tla~~l~~~~~~~~~~~~~~~~~~~p~~~~~ll~~~t~~~~~~~~~qi~aGad  208 (353)
T 1j93_A          129 YVGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEPKVLHALLQKFATSMAKYIRYQADSGAQ  208 (353)
T ss_dssp             HHHHHHHHHHHHHTTSSEEEEEEECHHHHHHHHHHSBCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             59999999998646787478760858999999974765566799999987483778999988899999999999851798


Q ss_pred             EEECCCCCCC
Q ss_conf             3524667677
Q gi|255764463|r  172 IIAPSEMMDG  181 (337)
Q Consensus       172 ivAPSdMMDG  181 (337)
                      +|.-.|..=|
T Consensus       209 ~i~i~ds~a~  218 (353)
T 1j93_A          209 AVQIFDSWAT  218 (353)
T ss_dssp             EEEEECGGGG
T ss_pred             EEEEEHHHHH
T ss_conf             8998201343


No 120
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MCSG, protein structure initiative; 1.20A {Agrobacterium tumefaciens str}
Probab=55.28  E-value=11  Score=17.58  Aligned_cols=114  Identities=17%  Similarity=0.195  Sum_probs=59.6

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEECCCCCHHHCCCCCC
Q ss_conf             2889999999999998889367633025633455445421576537999999999730-144798613327100114310
Q gi|255764463|r   64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI-PNIGIITDVALDPFTIHGHDG  142 (337)
Q Consensus        64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f-pdl~vi~DVcLc~YT~hGHcG  142 (337)
                      ....+.+.+.++.+.+.|+.++.+.+...+..       +++.+ =-.+.++...+.. +.+-|++-|.-          
T Consensus        20 ~iD~~~l~~~i~~l~~~Gv~gi~~~G~tGE~~-------~Ls~~-Er~~l~~~~~~~~~~~~~vi~gv~~----------   81 (294)
T 3b4u_A           20 TVDIDAMIAHARRCLSNGCDSVTLFGTTGEGC-------SVGSR-ERQAILSSFIAAGIAPSRIVTGVLV----------   81 (294)
T ss_dssp             SBCHHHHHHHHHHHHHTTCSEEEESSTTTTGG-------GSCHH-HHHHHHHHHHHTTCCGGGEEEEECC----------
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEECEECCCHH-------HCCHH-HHHHHHHHHHHHCCCCCCEEECCCC----------
T ss_conf             97999999999999977999999781253353-------58999-9999998855521577753531477----------


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCE--E-ECCCC----CCCHHHHHHHHHHHCCCCCCCEECHHH
Q ss_conf             013654462899999999999999628973--5-24667----677999999999877885773003366
Q gi|255764463|r  143 ILCDGEIVNDETIELISHAAVIQADAGADI--I-APSEM----MDGRVQEIRKKLDSHGHINVGIMPYVA  205 (337)
Q Consensus       143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaDi--v-APSdM----MDGrV~aIR~~Ld~~g~~~~~ImsYsa  205 (337)
                                .+.+.-.++|-...++|+|.  | .|.-.    -+|-+...+...++.+....+|+-|-.
T Consensus        82 ----------~~t~~~i~~a~~a~~~Gad~ilv~~P~~~~~~~~~~~~~~~~~i~~a~~~~~lpi~~yn~  141 (294)
T 3b4u_A           82 ----------DSIEDAADQSAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNI  141 (294)
T ss_dssp             ----------SSHHHHHHHHHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEEC
T ss_pred             ----------CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCC
T ss_conf             ----------859999999999987499789870685457853789999999999862477786411688


No 121
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=54.70  E-value=11  Score=17.52  Aligned_cols=115  Identities=10%  Similarity=0.073  Sum_probs=59.0

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCC
Q ss_conf             32889999999999998889367633025633455445421576537999999999730144798613327100114310
Q gi|255764463|r   63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDG  142 (337)
Q Consensus        63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcG  142 (337)
                      .....+.+.+.++.+.+.|+.++.+++.+.+..       +++.+- -.+.++...+....+  +.              
T Consensus        15 g~iD~~~l~~~i~~l~~~Gv~Gi~v~GstGE~~-------~Ls~eE-r~~l~~~~~~~~~~~--i~--------------   70 (288)
T 2nuw_A           15 GKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGP-------ALSKDE-KRQNLNALYDVTHKL--IF--------------   70 (288)
T ss_dssp             SCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGG-------GSCHHH-HHHHHHHHTTTCSCE--EE--------------
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEECEEHHHHH-------HCCHHH-HHHHHHHHHHHCCCE--EE--------------
T ss_conf             398999999999999985999899782125477-------689999-999999876640343--31--------------


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCC--EEECCCCC-----CCHHHHHHHHHHHCCCCCCCEECHHHHHHHH
Q ss_conf             01365446289999999999999962897--35246676-----7799999999987788577300336664354
Q gi|255764463|r  143 ILCDGEIVNDETIELISHAAVIQADAGAD--IIAPSEMM-----DGRVQEIRKKLDSHGHINVGIMPYVAKFNSS  210 (337)
Q Consensus       143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaD--ivAPSdMM-----DGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~  210 (337)
                        .=+...-+.|++    .+-...++|+|  ++.|-...     ++-+...++.-+.   .+.+|+-|..-..|.
T Consensus        71 --~v~~~~t~~~~~----~~~~a~~~G~d~~~~~~P~y~~~~~~~~i~~~~~~ia~~---~~~pi~iYn~P~~~g  136 (288)
T 2nuw_A           71 --QVGSLNLNDVME----LVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARI---SSHSLYIYNYPAATG  136 (288)
T ss_dssp             --ECCCSCHHHHHH----HHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHH---CCSCEEEEECHHHHS
T ss_pred             --CCCCCHHHHHHH----HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC---CCCCCCCCCCCCCCC
T ss_conf             --245300899999----999887754021310477432311278899999998541---379854205765458


No 122
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=53.70  E-value=12  Score=17.41  Aligned_cols=57  Identities=7%  Similarity=0.006  Sum_probs=40.9

Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCE
Q ss_conf             86328899999999999988893676330256334554454215765379999999997301447
Q gi|255764463|r   61 DVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIG  125 (337)
Q Consensus        61 Gv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~  125 (337)
                      ..+..+.+.++++++++.+.|.+-|.+..+..+.. +.       +-..+..+++.+|+.++.+.
T Consensus        95 ~~~l~s~eeI~e~a~~~~~~G~~~i~l~~g~~~~~-~~-------~~~~~~~~i~~i~~~~~~i~  151 (369)
T 1r30_A           95 AERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPH-ER-------DMPYLEQMVQGVKAMGLEAC  151 (369)
T ss_dssp             CCCCCCHHHHHHHHHHHHHTTCSEEEEEECCSSCC-TT-------THHHHHHHHHHHHHTTSEEE
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC-CC-------HHHHHHHHHHHHHHCCCEEE
T ss_conf             54668879999999989875997999995788887-02-------79999999998520475476


No 123
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=51.94  E-value=8.5  Score=18.38  Aligned_cols=47  Identities=21%  Similarity=0.206  Sum_probs=21.4

Q ss_pred             CCEEEEC---CCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCC
Q ss_conf             9879955---3114589999999624-998999934618999999998889
Q gi|255764463|r  254 ADMLLVK---PGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGW  300 (337)
Q Consensus       254 AD~lMVK---Pa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~  300 (337)
                      .|++.+-   |++.-+|+++++|+.. ..|+...--..+-..+..|-+.|.
T Consensus        51 ~DlvllD~~mP~~~G~e~l~~ir~~~p~~~iivlT~~~~~~~~~~a~~~Ga  101 (154)
T 2qsj_A           51 VDLILLDVNLPDAEAIDGLVRLKRFDPSNAVALISGETDHELIRAALEAGA  101 (154)
T ss_dssp             CSEEEECC------CHHHHHHHHHHCTTSEEEEC-----CHHHHHHHHTTC
T ss_pred             CCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHCCC
T ss_conf             978998088899888999999998788997999980289999999998599


No 124
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural genomics, JCSG, protein structure initiative, PSI; HET: NAP; 1.78A {Thermotoga maritima MSB8} SCOP: e.22.1.2
Probab=51.08  E-value=13  Score=17.14  Aligned_cols=15  Identities=20%  Similarity=0.344  Sum_probs=9.5

Q ss_pred             HHHHHHHHHHCCCCE
Q ss_conf             899999996249989
Q gi|255764463|r  266 LDVCFRIKEKFGLPT  280 (337)
Q Consensus       266 LDii~~~k~~~~~P~  280 (337)
                      ++-|+++-+..++|+
T Consensus       339 i~~i~~~~~~lglP~  353 (407)
T 1vlj_A          339 IEAFKNWLKKVGAPV  353 (407)
T ss_dssp             HHHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHCCCCC
T ss_conf             999999999869999


No 125
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=50.43  E-value=13  Score=17.07  Aligned_cols=139  Identities=12%  Similarity=0.043  Sum_probs=73.1

Q ss_pred             CCCCCHHHHHHHHHHHCCCCC-CCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             676779999999998778857-7300336664354301016753102446777744315721147889888876640898
Q gi|255764463|r  177 EMMDGRVQEIRKKLDSHGHIN-VGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESAD  255 (337)
Q Consensus       177 dMMDGrV~aIR~~Ld~~g~~~-~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD  255 (337)
                      |.=++-+..+-+.+.+.+..+ +.+.|++......+.    .   ..|.+.   ..+-+......+.............+
T Consensus       138 EiK~~~~~~~~~~i~~~~~~~~v~i~Sf~~~~l~~l~----~---~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (292)
T 3mz2_A          138 DKKDVPMERTAQLITDMQAEPYVMITVHDGASARFFY----E---KNPNFM---FEAFVKTKEAVQDYEDNGIPWSHIMA  207 (292)
T ss_dssp             CCSSSCHHHHHHHHHHTTCTTTEEEEESSHHHHHHHH----H---HCTTCC---EEEECCSHHHHHHHHHTTCCGGGEEE
T ss_pred             EECCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHH----H---HCCCCE---EEEEECCHHHHHHHHHHCCCHHHHHH
T ss_conf             9347538899999997087613999979999999999----8---699956---99983542566788870771655443


Q ss_pred             EEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHH
Q ss_conf             79955311458999999962499899993461899999999888978899999999999772699998201899999985
Q gi|255764463|r  256 MLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAARILT  335 (337)
Q Consensus       256 ~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~~L~  335 (337)
                      ++...=....-++|..+++ .++++.+|-|-.+-       ...+.   ..-.|.+.-+.+.|.|.|+|=+..++.++|+
T Consensus       208 ~~~~~~~~~~~~~v~~~~~-~G~~v~~wTvn~~~-------~~~~~---~~~~~~~~~l~~lGVdgI~TD~P~~l~~~l~  276 (292)
T 3mz2_A          208 YVGPKITPEVREVIDMLHE-RGVMCMISTAPSDD-------KLSTP---ESRAEAYRMIIRQGVDIIESDRPIEVAEAIS  276 (292)
T ss_dssp             EEESSCCHHHHHHHHHHHH-TTBCEEEECTTTGG-------GSSSH---HHHHHHHHHHHHTTCCEEEESCHHHHHHHHG
T ss_pred             HCCCCCCCCCHHHHHHHHH-CCCEEEEECCCCHH-------HHHHC---CCCHHHHHHHHHCCCCEEEECCHHHHHHHHH
T ss_conf             3166543057999999998-79989998878667-------63211---3879999999976999999698999999998


Q ss_pred             C
Q ss_conf             0
Q gi|255764463|r  336 H  336 (337)
Q Consensus       336 ~  336 (337)
                      +
T Consensus       277 ~  277 (292)
T 3mz2_A          277 S  277 (292)
T ss_dssp             G
T ss_pred             H
T ss_conf             6


No 126
>3h7c_X Agmatine deiminase; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; HET: MSE 211 1PE; 1.50A {Arabidopsis thaliana} PDB: 1vkp_A* 2q3u_A* 3h7k_A*
Probab=49.70  E-value=7  Score=18.96  Aligned_cols=39  Identities=21%  Similarity=0.119  Sum_probs=24.5

Q ss_pred             HHHHHHHHHHHC-CCEEEECCCCCH-HHCCCC-CCCC---CCCCC
Q ss_conf             999999997301-447986133271-001143-1001---36544
Q gi|255764463|r  111 NEGICAIKKNIP-NIGIITDVALDP-FTIHGH-DGIL---CDGEI  149 (337)
Q Consensus       111 ~rAIr~IK~~fp-dl~vi~DVcLc~-YT~hGH-cGi~---~~g~I  149 (337)
                      .+.-..+|+.++ +-+||.+-.+-. -.++|| |++.   ..+.|
T Consensus       193 ~~ie~~Lk~~lGv~~viwl~~g~~~~ddTdGHID~~arFv~~~~v  237 (383)
T 3h7c_X          193 EQIEEELKKYLGVQSFIWLPRGLYGDEDTNGHIDNMCCFARPGVV  237 (383)
T ss_dssp             HHHHHHHHHHHCCCEEEEESCCCTTCGGGTCCGGGTEEEEETTEE
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCE
T ss_conf             999999998639777999554412798876551112686279927


No 127
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=49.62  E-value=14  Score=16.99  Aligned_cols=69  Identities=23%  Similarity=0.241  Sum_probs=46.6

Q ss_pred             CCCCCCC-HHHHHHHHHHHHHHCCCCEEEE--CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf             4315721-1478898888766408987995--53114589999999624-99899993461899999999888978
Q gi|255764463|r  231 TYYLDPA-NVQEAIREASIDIQESADMLLV--KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN  302 (337)
Q Consensus       231 sYQmd~~-n~~eA~~e~~~D~~EGAD~lMV--KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d  302 (337)
                      .|+...+ |..||+....   ++--|++.+  -|++.-+++++++++.. ..|+...-..++......|-+.|..|
T Consensus        28 G~~v~~a~~g~eal~~l~---~~~~dlvllD~mp~~dGl~l~~~ir~~~~~~piI~lT~~~~~~~~~~a~~~Ga~d  100 (142)
T 2qxy_A           28 GFNVIWAKNEQEAFTFLR---REKIDLVFVDVFEGEESLNLIRRIREEFPDTKVAVLSAYVDKDLIINSVKAGAVD  100 (142)
T ss_dssp             TCEEEEESSHHHHHHHHT---TSCCSEEEEECTTTHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHHHTCSC
T ss_pred             CCEEEEECCHHHHHHHHH---HCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCE
T ss_conf             999999899999999998---5799999854786312899999999868999789997358889999999768978


No 128
>3cwn_A Transaldolase B; directed evolution, cytoplasm, pentose shunt, transferase; 1.40A {Escherichia coli} PDB: 3kof_A 1ucw_A* 1onr_A 1i2r_A 1i2q_A 1i2o_A 1i2p_A 1i2n_A
Probab=49.34  E-value=14  Score=16.96  Aligned_cols=77  Identities=26%  Similarity=0.186  Sum_probs=43.1

Q ss_pred             CCCCCCCHHHHHHHHHHH----HHC--CCEEEECCCCCHHHCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             215765379999999997----301--44798613327100114310--0136544628999999999999996289735
Q gi|255764463|r  102 HIIDPDNLINEGICAIKK----NIP--NIGIITDVALDPFTIHGHDG--ILCDGEIVNDETIELISHAAVIQADAGADII  173 (337)
Q Consensus       102 eA~n~dglv~rAIr~IK~----~fp--dl~vi~DVcLc~YT~hGHcG--i~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv  173 (337)
                      -++|-++.+-+|.|.++-    .++  .++|=.     |-|.-|---  .+...-|.--.|+--=..||+.-|+|||..|
T Consensus       121 la~Dt~~tI~~A~~L~~l~~~~~i~~~nv~IKI-----PaT~eGi~A~~~L~~~GI~vN~TLvFS~~Qa~aaaeAga~~I  195 (337)
T 3cwn_A          121 LSYDTEASIAKAKRLIKLYNDAGISNDRILIKL-----ASTWQGIRAAEQLEKEGINCNLTLLFSFAQARACAEAGVFLI  195 (337)
T ss_dssp             GTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEE-----ECSHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCSEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEC-----CCCHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCEEE
T ss_conf             034889999999999999887188876558835-----887899999999997698602121068999999996795599


Q ss_pred             ECCCCCCCHHHHH
Q ss_conf             2466767799999
Q gi|255764463|r  174 APSEMMDGRVQEI  186 (337)
Q Consensus       174 APSdMMDGrV~aI  186 (337)
                      +|=   =||+..+
T Consensus       196 Spf---VgRi~D~  205 (337)
T 3cwn_A          196 SPY---VGRILDW  205 (337)
T ss_dssp             EEB---SHHHHHH
T ss_pred             EEE---CCCCCCH
T ss_conf             641---1676323


No 129
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=48.69  E-value=14  Score=16.89  Aligned_cols=92  Identities=16%  Similarity=0.159  Sum_probs=61.5

Q ss_pred             CCHHHHHHHHHHHHHHCCCCEEEEC---CCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC---H---HH
Q ss_conf             2114788988887664089879955---3114589999999624-99899993461899999999888978---8---99
Q gi|255764463|r  236 PANVQEAIREASIDIQESADMLLVK---PGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN---K---ND  305 (337)
Q Consensus       236 ~~n~~eA~~e~~~D~~EGAD~lMVK---Pa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d---~---~~  305 (337)
                      ..|..||+.....   .--|++++-   |++.-+++++.+++.. ..|+...-.+.+-..+..|-+.|.-+   .   ..
T Consensus        47 a~~~~eal~~~~~---~~pDvvllDl~mp~~~G~el~~~ir~~~~~~~vivlS~~~~~~~~~~a~~~Ga~~yl~Kp~~~~  123 (152)
T 3eul_A           47 ADDGAAALELIKA---HLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRT  123 (152)
T ss_dssp             ESSHHHHHHHHHH---HCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHHTTCSEEEETTCCHH
T ss_pred             ECCHHHHHHHHHH---CCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECCCCHH
T ss_conf             8999999999984---6999999818999989999999999758998599996869999999999869989997999999


Q ss_pred             HHHHHHHHHHHHCCCEEEECHHHHHHHHHH
Q ss_conf             999999999772699998201899999985
Q gi|255764463|r  306 AMMESLLAFKRAGCDGIFTYFAMEAARILT  335 (337)
Q Consensus       306 ~~~E~l~~~kRAGAd~IitY~A~~~a~~L~  335 (337)
                      -+.+++....+.+     +|+.+++++.|-
T Consensus       124 ~L~~aI~~~~~g~-----~~~~~~~~~~l~  148 (152)
T 3eul_A          124 EIVKAVLDCAKGR-----DVVAPSLVGGLA  148 (152)
T ss_dssp             HHHHHHHHHHHCC-----------------
T ss_pred             HHHHHHHHHHCCC-----CCCCHHHHHHHH
T ss_conf             9999999998799-----977999999999


No 130
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, biotin enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=48.00  E-value=14  Score=16.82  Aligned_cols=51  Identities=25%  Similarity=0.421  Sum_probs=22.7

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             78632889999999999998889367633025633455445421576537999999999730
Q gi|255764463|r   60 PDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI  121 (337)
Q Consensus        60 PGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f  121 (337)
                      +...+++.+.+++.++++.+.|+..|.        .||..|.  .+|+ -+.+-++.||+.+
T Consensus       150 ~~~~~~~~~~~~~~~~~l~~~Gad~I~--------l~DT~G~--~~P~-~v~~lv~~lk~~~  200 (464)
T 2nx9_A          150 TTSPVHNLQTWVDVAQQLAELGVDSIA--------LKDMAGI--LTPY-AAEELVSTLKKQV  200 (464)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHTTCSEEE--------EEETTSC--CCHH-HHHHHHHHHHHHC
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCEEE--------ECCCCCC--CCHH-HHHHHHHHHHHHC
T ss_conf             568887889999999988746984898--------3598775--6878-9999999998627


No 131
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=47.47  E-value=14  Score=17.01  Aligned_cols=66  Identities=17%  Similarity=0.138  Sum_probs=34.5

Q ss_pred             CCCCCC-HHHHHHHHHHHHHHCCCCEEEEC---CCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCC
Q ss_conf             315721-14788988887664089879955---3114589999999624-998999934618999999998889
Q gi|255764463|r  232 YYLDPA-NVQEAIREASIDIQESADMLLVK---PGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGW  300 (337)
Q Consensus       232 YQmd~~-n~~eA~~e~~~D~~EGAD~lMVK---Pa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~  300 (337)
                      |+...+ |..||+....   ++--|++.+-   |++.=+++++.+|+.. ..|+...--.++......|-+.|.
T Consensus        32 ~~v~~a~~g~~Al~~l~---~~~~dlvi~D~~mP~~dG~~~~~~ir~~~~~~piI~lt~~~~~~~~~~a~~~Ga  102 (130)
T 3eod_A           32 ATTVLAADGVDALELLG---GFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGV  102 (130)
T ss_dssp             CEEEEESCHHHHHHHHT---TCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCC
T ss_pred             CEEEEECCHHHHHHHHH---CCCCCEEHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC
T ss_conf             99999899999999985---289887457421799989999999996098998999989999999999998699


No 132
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A
Probab=47.46  E-value=15  Score=16.77  Aligned_cols=117  Identities=11%  Similarity=0.061  Sum_probs=62.6

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCCCCC
Q ss_conf             28899999999999988893676330256334554454215765379999999997301-44798613327100114310
Q gi|255764463|r   64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHGHDG  142 (337)
Q Consensus        64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hGHcG  142 (337)
                      ....+.+.+.++.+.+.|+..|.+++...+..     +-+.++-   .+.++...+..+ ..-||+-|        |+  
T Consensus        48 ~ID~~~l~~~i~~l~~~Gv~Gi~v~GstGE~~-----~Ls~eEr---~~l~~~~~~~~~~r~pvi~gv--------~~--  109 (343)
T 2v9d_A           48 QLDKPGTAALIDDLIKAGVDGLFFLGSGGEFS-----QLGAEER---KAIARFAIDHVDRRVPVLIGT--------GG--  109 (343)
T ss_dssp             SBCHHHHHHHHHHHHHTTCSCEEESSTTTTGG-----GSCHHHH---HHHHHHHHHHHTTSSCEEEEC--------CS--
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEECEEHHHHH-----HCCHHHH---HHHHHHHHHHCCCCCCEEEEC--------CC--
T ss_conf             95999999999999985999899775577467-----6729999---999999999738988279854--------87--


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE---CCCCC---CCHHHHHHHHHHHCCCCCCCEECHHHHHHHHH
Q ss_conf             01365446289999999999999962897352---46676---77999999999877885773003366643543
Q gi|255764463|r  143 ILCDGEIVNDETIELISHAAVIQADAGADIIA---PSEMM---DGRVQEIRKKLDSHGHINVGIMPYVAKFNSSF  211 (337)
Q Consensus       143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA---PSdMM---DGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~f  211 (337)
                                .+.+...+++...+++|+|-+.   |.-.-   ++-+..-+...|.   .+.+|+-|-....+.+
T Consensus       110 ----------~st~~~~~~a~~a~~~G~dav~v~pP~~~~~~~~~~~~~f~~i~~a---~~~Pi~iYn~P~~~g~  171 (343)
T 2v9d_A          110 ----------TNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADS---VTLPVMLYNFPALTGQ  171 (343)
T ss_dssp             ----------SCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHT---CSSCEEEEECHHHHSS
T ss_pred             ----------CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH---CCCCEEEEECCCCHHH
T ss_conf             ----------8899999999999853898588435313455508899999999985---6996899966730333


No 133
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomics, JCSG, PSI, protein structure initiative; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=46.96  E-value=15  Score=16.72  Aligned_cols=56  Identities=25%  Similarity=0.330  Sum_probs=37.3

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHH-HCCCC
Q ss_conf             999999999999888936763302563345544542157653799999999973014479861332710-01143
Q gi|255764463|r   67 IDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPF-TIHGH  140 (337)
Q Consensus        67 id~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~Y-T~hGH  140 (337)
                      =.++...++.+.+.|.+.|.+.-.+..                 +.+|+.+.+.||++-|+| .|+|+- +++|.
T Consensus       149 G~s~~~ai~~L~~~G~~~I~~v~~ias-----------------~~Gi~~i~~~~P~v~I~t-a~iD~~Lne~gy  205 (221)
T 1o5o_A          149 GVSSIKAIEILKENGAKKITLVALIAA-----------------PEGVEAVEKKYEDVKIYV-AALDERLNDHGY  205 (221)
T ss_dssp             SHHHHHHHHHHHHTTCCEEEEECSEEC-----------------HHHHHHHHHHCTTCEEEE-SEECSEECTTSC
T ss_pred             CHHHHHHHHHHHHCCCCEEEEEEEEEC-----------------HHHHHHHHHHCCCCEEEE-EEECCCCCCCCC
T ss_conf             712999999998659970899998855-----------------899999998787988999-984586079987


No 134
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein structure initiative; 2.30A {Brucella melitensis 16M}
Probab=46.34  E-value=15  Score=16.66  Aligned_cols=24  Identities=17%  Similarity=0.235  Sum_probs=18.9

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             288999999999999888936763
Q gi|255764463|r   64 RMSIDVAVEKIKQVADLGIPAIAI   87 (337)
Q Consensus        64 R~Sid~L~~eie~~~~lGI~av~L   87 (337)
                      ++|.+..++.++.+.++||..|=+
T Consensus        22 ~~~~~~k~~i~~~L~~aGv~~IEv   45 (295)
T 1ydn_A           22 FVPTADKIALINRLSDCGYARIEA   45 (295)
T ss_dssp             CCCHHHHHHHHHHHTTTTCSEEEE
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf             989999999999999819998998


No 135
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, hydrolase; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=45.80  E-value=16  Score=16.60  Aligned_cols=65  Identities=18%  Similarity=0.202  Sum_probs=38.7

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC---CCCC-----------CC-CHHHHHHHH-HHHHHC-CCEEEEC
Q ss_conf             99999999999988893676330256334554454---2157-----------65-379999999-997301-4479861
Q gi|255764463|r   67 IDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGS---HIID-----------PD-NLINEGICA-IKKNIP-NIGIITD  129 (337)
Q Consensus        67 id~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~Gs---eA~n-----------~d-glv~rAIr~-IK~~fp-dl~vi~D  129 (337)
                      .+.|.+.+..+.+|||++|-|=|+.+.......|-   ..|+           +. |=. ...++ +++.-. .|-||.|
T Consensus        24 ~~~i~~kldyL~~LGv~aIwl~Pi~~~~~~~~~GY~~~~~y~~~~~~~~~~vd~~~Gt~-~dfk~LV~~aH~~GI~VIlD  102 (485)
T 1wpc_A           24 WNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTR-SQLQAAVTSLKNNGIQVYGD  102 (485)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSCSSCCH-HHHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHCCCEEEEE
T ss_conf             99999968999971998899695700888788887755665554444467658899999-99999999999889989999


Q ss_pred             CCC
Q ss_conf             332
Q gi|255764463|r  130 VAL  132 (337)
Q Consensus       130 VcL  132 (337)
                      +-+
T Consensus       103 vV~  105 (485)
T 1wpc_A          103 VVM  105 (485)
T ss_dssp             ECC
T ss_pred             EEC
T ss_conf             814


No 136
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=45.61  E-value=16  Score=16.58  Aligned_cols=69  Identities=20%  Similarity=0.241  Sum_probs=43.7

Q ss_pred             CCCCCC-HHHHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCCH
Q ss_conf             315721-1478898888766408987995---53114589999999624-998999934618999999998889788
Q gi|255764463|r  232 YYLDPA-NVQEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWINK  303 (337)
Q Consensus       232 YQmd~~-n~~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d~  303 (337)
                      |+...+ |..+|+....   .+.-|++..   =|+|.=+++++.+++.. .+|+...--.++......|-+.|..|+
T Consensus        28 ~~v~~a~~~~~al~~l~---~~~~dliilD~~mP~~dGle~~~~ir~~~~~~pvI~lT~~~~~~~~~~a~~~Ga~dy  101 (155)
T 1qkk_A           28 FTVSSFASATEALAGLS---ADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYDF  101 (155)
T ss_dssp             CEEEEESCHHHHHHTCC---TTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGGHHHHHHHHHTTCCEE
T ss_pred             CEEEEECCHHHHHHHHH---CCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEE
T ss_conf             98999789999999853---269877765457899989999999997298994898979899999999998699889


No 137
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HUPR1; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=45.06  E-value=10  Score=17.89  Aligned_cols=69  Identities=17%  Similarity=0.182  Sum_probs=40.4

Q ss_pred             CCCCCCCH-HHHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHH-HCCCCC
Q ss_conf             43157211-478898888766408987995---53114589999999624-99899993461899999999-888978
Q gi|255764463|r  231 TYYLDPAN-VQEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAAS-LQGWIN  302 (337)
Q Consensus       231 sYQmd~~n-~~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~-~~g~~d  302 (337)
                      .|+...+. ..+|+....   .+--|++.+   =|+|.=+++++.+|+.. ..|+..---.++......+. +.|..|
T Consensus        24 g~~v~~a~~~~~al~~~~---~~~~dlvl~D~~mP~~~G~ell~~ir~~~~~~~vI~lt~~~~~~~~~~a~~~~Ga~d   98 (139)
T 2jk1_A           24 DFDVLTAQGAEAAIAILE---EEWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGYTDSASMMAAINDAGIHQ   98 (139)
T ss_dssp             TSCEEEESSHHHHHHHHH---HSCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESCTTCHHHHHHHHHTTCCE
T ss_pred             CCEEEEECCHHHHHHHHH---HCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCE
T ss_conf             999999899999999997---289999998556789855999999998189995899989799899999999859980


No 138
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomics, NPPSFA; 2.00A {Geobacillus kaustophilus HTA426}
Probab=44.56  E-value=16  Score=16.47  Aligned_cols=175  Identities=13%  Similarity=0.136  Sum_probs=92.8

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCC
Q ss_conf             88999999999999888936763302563345544542157653799999999973014479861332710011431001
Q gi|255764463|r   65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGIL  144 (337)
Q Consensus        65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~  144 (337)
                      -+.++++++++.+...|+..|=+=  ++ -..+      .++..-+...++.+++.++++-+|.  ++-+-...|+   .
T Consensus        29 ~t~~e~l~~~~~~~~~~~D~vElR--lD-~l~~------~~~~~~~~~~~~~l~~~~~~~PiI~--T~R~~~eGG~---~   94 (257)
T 2yr1_A           29 EDDRKVLREAEEVCRKQPDLLEWR--AD-FFRA------IDDQERVLATANGLRNIAGEIPILF--TIRSEREGGQ---P   94 (257)
T ss_dssp             SSHHHHHHHHHHHHHSCCSEEEEE--GG-GCTT------TTCHHHHHHHHHHHHHHSSSCCEEE--ECCCTTTTCC---C
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEEE--EE-CCCC------CCCHHHHHHHHHHHHHHCCCCCEEE--EEEEHHHCCC---C
T ss_conf             998999999998755698999997--53-3234------7998999999999997458997899--9930655898---8


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCC
Q ss_conf             36544628999999999999996289735246676779999999998778857730033666435430101675310244
Q gi|255764463|r  145 CDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDL  224 (337)
Q Consensus       145 ~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~  224 (337)
                         .-+.++-...|.+.++..  ..+|+|-=-.-++.++..+++.....  ....|+||-                   .
T Consensus        95 ---~~~~~~~~~~l~~~~~~~--~~~d~vDiEl~~~~~~~~~~~~~~~~--~~~vI~S~H-------------------~  148 (257)
T 2yr1_A           95 ---IPLNEAEVRRLIEAICRS--GAIDLVDYELAYGERIADVRRMTEEC--SVWLVVSRH-------------------Y  148 (257)
T ss_dssp             ---CSSCHHHHHHHHHHHHHH--TCCSEEEEEGGGTTHHHHHHHHHHHT--TCEEEEEEE-------------------E
T ss_pred             ---CCCCHHHHHHHHHHHHHC--CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEEE-------------------C
T ss_conf             ---999999999999888744--99607874202203489999987627--978999763-------------------6


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHH-HCCCCEEEE-CC------CHHHHHHHHHHHHHCCCCEEEEECCHHH
Q ss_conf             67777443157211478898888766-408987995-53------1145899999996249989999346189
Q gi|255764463|r  225 LKGDKKTYYLDPANVQEAIREASIDI-QESADMLLV-KP------GLPYLDVCFRIKEKFGLPTFAYQVSGEY  289 (337)
Q Consensus       225 ~~gdr~sYQmd~~n~~eA~~e~~~D~-~EGAD~lMV-KP------a~~yLDii~~~k~~~~~P~~aYqVSGEY  289 (337)
                      |.+       .|  ..+.+.+...+. .-|||++=+ -.      .+..|.++..+++.+..|+.++.- ||+
T Consensus       149 f~~-------tp--~~~~l~~~~~~~~~~gaDivKia~~~~~~~D~l~ll~~~~~~~~~~~~p~i~~~M-G~~  211 (257)
T 2yr1_A          149 FDG-------TP--RKETLLADMRQAERYGADIAKVAVMPKSPEDVLVLLQATEEARRELAIPLITMAM-GGL  211 (257)
T ss_dssp             SSC-------CC--CHHHHHHHHHHHHHTTCSEEEEEECCSSHHHHHHHHHHHHHHHHHCSSCEEEEEC-TTT
T ss_pred             CCC-------CC--CHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEC-CCC
T ss_conf             899-------98--9899999999998728999999985798889999999999987357998899976-987


No 139
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=43.86  E-value=17  Score=16.40  Aligned_cols=173  Identities=16%  Similarity=0.111  Sum_probs=89.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCEEECCC-CCCCHHHHHHHHHHHCCC---CCCCEECHHHHHHHHHHCCHHHHHHCCCC
Q ss_conf             46289999999999999962897352466-767799999999987788---57730033666435430101675310244
Q gi|255764463|r  149 IVNDETIELISHAAVIQADAGADIIAPSE-MMDGRVQEIRKKLDSHGH---INVGIMPYVAKFNSSFYGPYRDAISTRDL  224 (337)
Q Consensus       149 IdND~Tl~~L~k~Al~~A~AGaDivAPSd-MMDGrV~aIR~~Ld~~g~---~~~~ImsYsaKfaS~fYgPFRdA~~S~p~  224 (337)
                      ...+.|-+.+++.+....++|+.+|.=-. ...-.|++||++|+..-=   ....+.+-+.-..-.+..+|-- +|-.-+
T Consensus       245 ~~~~~~pe~fa~~~~~w~e~Ga~IIGGCCGTtPeHI~aL~~~l~~~~p~~~~~~~~~~~~s~~~~~~~~~~~~-iGERiN  323 (566)
T 1q7z_A          245 TVYPLKPHDFAVHIDSYYELGVNIFGGCCGTTPEHVKLFRKVLGNRKPLQRKKKRIFAVSSPSKLVTFDHFVV-IGERIN  323 (566)
T ss_dssp             EECCCCHHHHHTTHHHHHHTTCSEECCCTTCCHHHHHHHHHHHCSCCCCCCCCCCCCEEECSSCEEESSSCEE-EEEEEC
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHEE-CCCCCC
T ss_conf             2267998999999999998599588104569879999999986438998878776434467642334310000-132024


Q ss_pred             CCCCCC-CCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHH-------HHHHHHHHHCCCCEEEEECCHHHHHHHHHH
Q ss_conf             677774-431572114788988887664089879955311458-------999999962499899993461899999999
Q gi|255764463|r  225 LKGDKK-TYYLDPANVQEAIREASIDIQESADMLLVKPGLPYL-------DVCFRIKEKFGLPTFAYQVSGEYAMIKAAS  296 (337)
Q Consensus       225 ~~gdr~-sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yL-------Dii~~~k~~~~~P~~aYqVSGEYami~~a~  296 (337)
                      ..|.++ ...|--.+...++.++..-+++||++|=|-.+.+-.       -+|..+.+.+++|+..=-.  ...-|.+|-
T Consensus       324 ~tg~~~~~~~i~~~d~~~~~~~a~~Q~~~GA~~lDvn~~~~~~~e~~~m~~~v~~~~~~~~~Pl~iDS~--~~~viea~L  401 (566)
T 1q7z_A          324 PAGRKKLWAEMQKGNEEIVIKEAKTQVEKGAEVLDVNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQ--NVDLTERAL  401 (566)
T ss_dssp             CTTCHHHHHHHHTTCCHHHHHHHHHHHHTTCSEEEEECSSGGGSCHHHHHHHHHHHHHHTCSCEEEECC--CHHHHHHHH
T ss_pred             CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCC--CHHHHHHHH
T ss_conf             533788999987133167999999999869987862067641267999999999998538987242688--799999999


Q ss_pred             HC--C--CCC----HHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             88--8--978----8999999999997726999982
Q gi|255764463|r  297 LQ--G--WIN----KNDAMMESLLAFKRAGCDGIFT  324 (337)
Q Consensus       297 ~~--g--~~d----~~~~~~E~l~~~kRAGAd~Iit  324 (337)
                      +.  |  .+|    ++.-+.+.+--.|+-||.+|.-
T Consensus       402 ~~~~g~~iiNSi~~~~~~~~~~~~l~k~yga~vv~l  437 (566)
T 1q7z_A          402 RAYPGRSLFNSAKVDEEELEMKINLLKKYGGTLIVL  437 (566)
T ss_dssp             HHCSSCCEEEEEESCHHHHHHHHHHHHHHCCEEEEE
T ss_pred             HHCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEE
T ss_conf             963899726653477520589999999739868998


No 140
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 1loq_A* 1lor_A* 1kly_A* 3lhz_A* 3m44_A 3lhw_A* ...
Probab=43.81  E-value=17  Score=16.40  Aligned_cols=96  Identities=23%  Similarity=0.203  Sum_probs=51.7

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCC
Q ss_conf             89999999999998889367633025633455445421576537999999999730144798613327100114310013
Q gi|255764463|r   66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILC  145 (337)
Q Consensus        66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~  145 (337)
                      +.+++++-++.+.    +.+-.| .+        |.+-+...|  .+.|+.+|+.||.- |+.|.=+             
T Consensus        23 ~~~~al~i~~~l~----~~v~~i-Ki--------G~~l~~~~G--~~~i~~l~~~~~~~-if~D~K~-------------   73 (228)
T 3m47_A           23 NRDDALRVTGEVR----EYIDTV-KI--------GYPLVLSEG--MDIIAEFRKRFGCR-IIADFKV-------------   73 (228)
T ss_dssp             SHHHHHHHHHTTT----TTCSEE-EE--------EHHHHHHHC--THHHHHHHHHHCCE-EEEEEEE-------------
T ss_pred             CHHHHHHHHHHHC----CCCCEE-EE--------CHHHHHHCC--HHHHHHHHHHCCCC-EEEEEEE-------------
T ss_conf             9999999999847----857499-98--------899996339--89999999768982-9996010-------------


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC-CCHHHHHHHHHHHCCCC
Q ss_conf             6544628999999999999996289735246676-77999999999877885
Q gi|255764463|r  146 DGEIVNDETIELISHAAVIQADAGADIIAPSEMM-DGRVQEIRKKLDSHGHI  196 (337)
Q Consensus       146 ~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMM-DGrV~aIR~~Ld~~g~~  196 (337)
                         -|-..|+...++   ...++|||++-=.... ...+.+..++.++.|..
T Consensus        74 ---~DIp~T~~~~~~---~~~~~gad~~TVh~~~g~~~i~~~~~~~~~~~~~  119 (228)
T 3m47_A           74 ---ADIPETNEKICR---ATFKAGADAIIVHGFPGADSVRACLNVAEEMGRE  119 (228)
T ss_dssp             ---CSCHHHHHHHHH---HHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCE
T ss_pred             ---CCHHHHHHHHHH---HHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCE
T ss_conf             ---007779999999---9985599899996679978999999998840980


No 141
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=43.76  E-value=17  Score=16.39  Aligned_cols=34  Identities=18%  Similarity=0.221  Sum_probs=26.7

Q ss_pred             CCCCCCC-CCCCHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             4888786-328899999999999988893676330
Q gi|255764463|r   56 INSMPDV-MRMSIDVAVEKIKQVADLGIPAIAIFP   89 (337)
Q Consensus        56 I~SMPGv-~R~Sid~L~~eie~~~~lGI~av~LFp   89 (337)
                      |+.+-|- ...|++.+++|++.+.+.|.+.|.|+.
T Consensus        23 ip~~rG~~rsr~~e~Ii~Ei~~l~~~G~kei~l~~   57 (304)
T 2qgq_A           23 IPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVA   57 (304)
T ss_dssp             -----CCCCBCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             EEEEECCEEEECHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf             62014983771999999999999986990999985


No 142
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, loop-6, purine biosynthesis; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=43.74  E-value=17  Score=16.39  Aligned_cols=69  Identities=25%  Similarity=0.318  Sum_probs=34.2

Q ss_pred             HHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE----ECC--------
Q ss_conf             79999999997301447986133271001143100136544628999999999999996289735----246--------
Q gi|255764463|r  109 LINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADII----APS--------  176 (337)
Q Consensus       109 lv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv----APS--------  176 (337)
                      .+...|+.||+.||++.||+=-+-.                         .++|.-+.++|||.|    .|-        
T Consensus       180 ~~~~~ik~ik~~~p~~~VIaGNV~T-------------------------~e~a~~L~~~GAD~VkVGiG~Gs~CtTr~~  234 (404)
T 1eep_A          180 RIIELIKKIKTKYPNLDLIAGNIVT-------------------------KEAALDLISVGADCLKVGIGPGSICTTRIV  234 (404)
T ss_dssp             HHHHHHHHHHHHCTTCEEEEEEECS-------------------------HHHHHHHHTTTCSEEEECSSCSTTSHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCEECCCCCC-------------------------HHHHHHHHHCCCCEEEECCCCCCCCCCCCE
T ss_conf             8999999999878998677145556-------------------------999999997599966752557866567411


Q ss_pred             -CCCCCHHHHHHHHHHHCCCCCCCEEC
Q ss_conf             -67677999999999877885773003
Q gi|255764463|r  177 -EMMDGRVQEIRKKLDSHGHINVGIMP  202 (337)
Q Consensus       177 -dMMDGrV~aIR~~Ld~~g~~~~~Ims  202 (337)
                       +---.|..++.+..+.....+++|.+
T Consensus       235 tGvG~pq~sAv~~~~~~~~~~~vpIIA  261 (404)
T 1eep_A          235 AGVGVPQITAICDVYEACNNTNICIIA  261 (404)
T ss_dssp             HCCCCCHHHHHHHHHHHHTTSSCEEEE
T ss_pred             ECCCCCHHHHHHHHHHHHCCCCCCEEC
T ss_conf             355511489999999986246876673


No 143
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=43.01  E-value=17  Score=16.32  Aligned_cols=31  Identities=23%  Similarity=0.371  Sum_probs=25.6

Q ss_pred             CCCCCHHHHHHHHHHHHHCCCCEEEE-EECCC
Q ss_conf             63288999999999999888936763-30256
Q gi|255764463|r   62 VMRMSIDVAVEKIKQVADLGIPAIAI-FPNIP   92 (337)
Q Consensus        62 v~R~Sid~L~~eie~~~~lGI~av~L-Fp~I~   92 (337)
                      -.++|.+..++.++.+.+.||+.|=+ ||+.+
T Consensus        21 ~~~~s~~~k~~i~~~L~~aGv~~IEvg~~~~~   52 (293)
T 3ewb_X           21 GVNFDVKEKIQIALQLEKLGIDVIEAGFPISS   52 (293)
T ss_dssp             --CCCHHHHHHHHHHHHHHTCSEEEEECGGGC
T ss_pred             CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf             99989999999999999839699999668788


No 144
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92, PSI-2; 2.10A {Neptuniibacter caesariensis}
Probab=42.39  E-value=17  Score=16.26  Aligned_cols=69  Identities=9%  Similarity=0.057  Sum_probs=40.5

Q ss_pred             CCCCCCCHH-HHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf             431572114-78898888766408987995---53114589999999624-99899993461899999999888978
Q gi|255764463|r  231 TYYLDPANV-QEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN  302 (337)
Q Consensus       231 sYQmd~~n~-~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d  302 (337)
                      .|+...++. .+|+....   ++--|++..   =|.+.=+++++.+|+.. .+|+...-..++-.....|.+.|.+|
T Consensus        31 g~~v~~a~~~~~Al~~l~---~~~~dliilD~~mp~~~G~~~l~~ir~~~~~~piI~lt~~~~~~~~~~ai~~Gavd  104 (154)
T 2rjn_A           31 GCNIITFTSPLDALEALK---GTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYADAQATIDAVNRGKIS  104 (154)
T ss_dssp             TCEEEEESCHHHHHHHHT---TSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGGHHHHHHHHHTTCCS
T ss_pred             CCEEEEECCHHHHHHHHH---CCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCC
T ss_conf             998999899999999986---28998899668888888189999999858899789998669999999999769998


No 145
>3f6c_A Positive transcription regulator EVGA; structural genomics, , PSI-2, protein structure initiative; 1.45A {Escherichia coli k-12}
Probab=41.81  E-value=16  Score=16.49  Aligned_cols=64  Identities=11%  Similarity=0.113  Sum_probs=46.6

Q ss_pred             CCHHHHHHHHHHHHHHCCCCEEEEC---CCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf             2114788988887664089879955---3114589999999624-99899993461899999999888978
Q gi|255764463|r  236 PANVQEAIREASIDIQESADMLLVK---PGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN  302 (337)
Q Consensus       236 ~~n~~eA~~e~~~D~~EGAD~lMVK---Pa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d  302 (337)
                      ..|..||+.....   +--|++++-   |++.-+++++.+|++. ..|+..+-.+.+-.....|.+.|.-+
T Consensus        32 a~~g~~al~~~~~---~~pDlvilD~~mP~~~G~e~~~~lr~~~~~~~iivlS~~~~~~~~~~a~~~Ga~~   99 (134)
T 3f6c_A           32 LTEGGSAVQRVET---LKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANG   99 (134)
T ss_dssp             ESSSTTHHHHHHH---HCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC---CTHHHHHHTTCSE
T ss_pred             ECCHHHHHHHHHC---CCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCE
T ss_conf             8999999999872---6999999959999998999999999529998389996789999999999879989


No 146
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=41.68  E-value=8.6  Score=18.35  Aligned_cols=22  Identities=27%  Similarity=0.437  Sum_probs=10.3

Q ss_pred             HHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             8999999999999996289735
Q gi|255764463|r  152 DETIELISHAAVIQADAGADII  173 (337)
Q Consensus       152 D~Tl~~L~k~Al~~A~AGaDiv  173 (337)
                      .++++.+.+..-.-++-||+.|
T Consensus       103 ~~ai~~~k~~id~A~~lGa~~v  124 (333)
T 3ktc_A          103 AAAFELMHESAGIVRELGANYV  124 (333)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSEE
T ss_pred             HHHHHHHHHHHHHHHHHCCCEE
T ss_conf             9999999999999998499726


No 147
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii OT3} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=41.61  E-value=18  Score=16.18  Aligned_cols=83  Identities=16%  Similarity=0.318  Sum_probs=48.4

Q ss_pred             ECCCCCCC-----CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH------HCC
Q ss_conf             04888786-----3288999999999999888936763302563345544542157653799999999973------014
Q gi|255764463|r   55 SINSMPDV-----MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKN------IPN  123 (337)
Q Consensus        55 ~I~SMPGv-----~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~------fpd  123 (337)
                      .+..+|+.     .-.+-+.+.+.++++.+.|++++++|..--.+. ++.|       .-.++.+.++-.+      =|+
T Consensus        57 sl~dlp~~~Dlavi~vp~~~v~~~~~e~~~~gv~~~vi~s~Gf~e~-~~~g-------~~~~~~l~~~a~~~g~riiGPN  128 (457)
T 2csu_A           57 SVKDIPDEIDLAIIVVPKRFVKDTLIQCGEKGVKGVVIITAGFGET-GEEG-------KREEKELVEIAHKYGMRIIGPN  128 (457)
T ss_dssp             STTSCSSCCSEEEECSCHHHHHHHHHHHHHHTCCEEEECCCSSTTS-CHHH-------HHHHHHHHHHHHHHTCEEECSS
T ss_pred             CHHHCCCCCCEEEEEECHHHHHHHHHHHHHCCCCEEEECCCCCCCC-CCCC-------HHHHHHHHHHHHHCCCEEECCC
T ss_conf             9888699989899995778889999999975998899716666532-2212-------4689999998875697796368


Q ss_pred             -CEEEE-----CCCCCHHHCCCCCCCCC
Q ss_conf             -47986-----13327100114310013
Q gi|255764463|r  124 -IGIIT-----DVALDPFTIHGHDGILC  145 (337)
Q Consensus       124 -l~vi~-----DVcLc~YT~hGHcGi~~  145 (337)
                       ++++.     .....+....||.|++.
T Consensus       129 c~G~i~~~~~~~~~~~~~~~~G~ialvs  156 (457)
T 2csu_A          129 CVGIMNTHVDLNATFITVAKKGNVAFIS  156 (457)
T ss_dssp             CCEEEEGGGTEEEESSCCCEECSEEEEE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf             6663066312466544316999779996


No 148
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=41.41  E-value=18  Score=16.16  Aligned_cols=106  Identities=14%  Similarity=0.175  Sum_probs=58.7

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC--CCCCCCCH------------HHHHHHHHHHHHCCCEEEECCC
Q ss_conf             899999999999988893676330256334554454--21576537------------9999999997301447986133
Q gi|255764463|r   66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGS--HIIDPDNL------------INEGICAIKKNIPNIGIITDVA  131 (337)
Q Consensus        66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~Gs--eA~n~dgl------------v~rAIr~IK~~fpdl~vi~DVc  131 (337)
                      .+..+.+.+..+.++|+++|-|-|+-+....+..|.  +.|++.++            ..+.|++++++  .|-||.|+.
T Consensus        28 d~~gi~~kLdyl~~LGv~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~vd~~~Gt~~dfk~Lv~~aH~~--Gi~VilD~V  105 (449)
T 3dhu_A           28 NFAGVTADLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHEL--GMKVMLDIV  105 (449)
T ss_dssp             SHHHHHTTHHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred             CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEEEEE
T ss_conf             999999704999976998899499673877788887899867445687585679999999999999987--999986562


Q ss_pred             CCHHHC-------------CCCCCCCC----------CCCCCHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             271001-------------14310013----------65446289999999999999962897352
Q gi|255764463|r  132 LDPFTI-------------HGHDGILC----------DGEIVNDETIELISHAAVIQADAGADIIA  174 (337)
Q Consensus       132 Lc~YT~-------------hGHcGi~~----------~g~IdND~Tl~~L~k~Al~~A~AGaDivA  174 (337)
                      +-.-+.             +-.+|-..          +=.-.|.+..+.+.+ .+.+=+-|+|-.-
T Consensus       106 ~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~~~v~~~~~~-~l~~W~~gvDGfR  170 (449)
T 3dhu_A          106 YNHTSPDSVLATEHPEWFYHDADGQLTNKVGDWSDVKDLDYGHHELWQYQID-TLLYWSQFVDGYR  170 (449)
T ss_dssp             CSEECTTSHHHHHCGGGBCBCTTSCBCCSSTTCTTCEEBCTTSHHHHHHHHH-HHHHHTTTCSEEE
T ss_pred             CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHHHCCCCEE
T ss_conf             2544441001023775321256676544454666555535478788778889-9986441268716


No 149
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltransferase; 5-methyltetrahydrofolate,methyltransferase, TIM barrel; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=40.06  E-value=19  Score=16.02  Aligned_cols=185  Identities=16%  Similarity=0.169  Sum_probs=85.9

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH---HHHHCCCEEEECCC--------
Q ss_conf             3288999999999999888936763302563345544542157653799999999---97301447986133--------
Q gi|255764463|r   63 MRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAI---KKNIPNIGIITDVA--------  131 (337)
Q Consensus        63 ~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~I---K~~fpdl~vi~DVc--------  131 (337)
                      ..-..+.+++.+.+-.+.|-.-+=+=|+          +...++.--+.|.+..|   .+.+ ++-|..|.-        
T Consensus        32 ~~~d~d~a~~~A~~qv~~GA~iIDVn~G----------~~~v~~~ee~~rvv~~I~~i~~~~-dvPisIDT~~~~v~eaa  100 (300)
T 3k13_A           32 NEKKYDEALSIARQQVEDGALVIDVNMD----------DGLLDARTEMTTFLNLIMSEPEIA-RVPVMIDSSKWEVIEAG  100 (300)
T ss_dssp             HTTCHHHHHHHHHHHHHTTCSEEEEECC----------CTTSCHHHHHHHHHHHHHTCHHHH-TSCEEEECSCHHHHHHH
T ss_pred             HCCCHHHHHHHHHHHHHCCCCEEEECCC----------CCCCCHHHHHHHHHHHHHHHHHCC-CCCEEECCCCHHHHHHH
T ss_conf             8679999999999999869998985899----------888888999999999999855116-87647358878999999


Q ss_pred             CCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECC----CC---CCCHHHHH---HH-HHHHCCCCCC--
Q ss_conf             271001143100136544628999999999999996289735246----67---67799999---99-9987788577--
Q gi|255764463|r  132 LDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPS----EM---MDGRVQEI---RK-KLDSHGHINV--  198 (337)
Q Consensus       132 Lc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPS----dM---MDGrV~aI---R~-~Ld~~g~~~~--  198 (337)
                      |..|  -|.+.+-.-..-   ...+.+.+.+-.-++-|+.+|+-.    .|   -..||...   +. ..++.|...-  
T Consensus       101 L~~~--~g~~~insi~~~---~~~~~~~~~~~la~~y~a~vi~l~~d~~g~~~~~~~~v~~~~~~~~~~a~~aGi~~e~I  175 (300)
T 3k13_A          101 LKCL--QGKSIVNSISLK---EGEEVFLEHARIIKQYGAATVVMAFDEKGQADTAARKIEVCERAYRLLVDKVGFNPHDI  175 (300)
T ss_dssp             HHHC--SSCCEEEEECST---TCHHHHHHHHHHHHHHTCEEEEESEETTEECCSHHHHHHHHHHHHHHHHHHTCCCGGGE
T ss_pred             HHHH--CCCCCCCCCCCC---CHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHE
T ss_conf             9984--378775444434---32777787628998769874303345677898799999999999999998538988995


Q ss_pred             ----CEECHHHHHH--HH-------HHCCHHHHH-HCCCCCCCCCCCCCCCCCHH-HHHHHHH--HHHHHCCCCEEEECC
Q ss_conf             ----3003366643--54-------301016753-10244677774431572114-7889888--876640898799553
Q gi|255764463|r  199 ----GIMPYVAKFN--SS-------FYGPYRDAI-STRDLLKGDKKTYYLDPANV-QEAIREA--SIDIQESADMLLVKP  261 (337)
Q Consensus       199 ----~ImsYsaKfa--S~-------fYgPFRdA~-~S~p~~~gdr~sYQmd~~n~-~eA~~e~--~~D~~EGAD~lMVKP  261 (337)
                          .++.-++.-.  ..       +-.-++.-. +..-...-..-|+-++.++. ++.+..+  ..-+.-|-|.-.+.|
T Consensus       176 iiDPl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~~GlSNiSfglp~~~~~r~~ln~~Fl~~ai~aGLd~aI~np  255 (300)
T 3k13_A          176 IFDPNVLAVATGIEEHNNYAVDFIEATGWIRKNLPGAHVSGGVSNLSFSFRGNNYIREAMHAVFLYHAIQQGMDMGIVNP  255 (300)
T ss_dssp             EEECCCCCCSSSCGGGTTHHHHHHHHHHHHHHHSTTCEECCBGGGGGGGGTTCHHHHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred             EEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCH
T ss_conf             76031243204608889999999999999875467762786321000578863178999999999999985886320795


Q ss_pred             CH
Q ss_conf             11
Q gi|255764463|r  262 GL  263 (337)
Q Consensus       262 a~  263 (337)
                      .-
T Consensus       256 ~d  257 (300)
T 3k13_A          256 GT  257 (300)
T ss_dssp             C-
T ss_pred             HH
T ss_conf             33


No 150
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=40.03  E-value=19  Score=16.02  Aligned_cols=50  Identities=28%  Similarity=0.361  Sum_probs=34.8

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCH
Q ss_conf             99999999999988893676330256334554454215765379999999997301447986133271
Q gi|255764463|r   67 IDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDP  134 (337)
Q Consensus        67 id~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~  134 (337)
                      =.++...++.+.+.|++.|.+.-.+..                 +..|+.+.++|||+-|+|= |+||
T Consensus       137 G~s~~~ai~~L~~~G~~~I~~vs~ias-----------------~~Gl~~l~~~~P~v~I~t~-~iD~  186 (209)
T 1i5e_A          137 GGSAVAAIDALKKRGAKSIKFMCLIAA-----------------PEGVKAVETAHPDVDIYIA-ALDE  186 (209)
T ss_dssp             SHHHHHHHHHHHHTTCCCEEEECSEEC-----------------HHHHHHHHHHCTTCEEEES-EECC
T ss_pred             CHHHHHHHHHHHHCCCCCEEEEEEECC-----------------HHHHHHHHHHCCCCEEEEE-EECC
T ss_conf             777999999999669985799998507-----------------9999999987949789999-9678


No 151
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima}
Probab=40.00  E-value=19  Score=16.01  Aligned_cols=55  Identities=18%  Similarity=0.167  Sum_probs=34.8

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEE--------CHHHHHHHHH
Q ss_conf             14589999999624998999934618999999998889788999999999997726999982--------0189999998
Q gi|255764463|r  263 LPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFT--------YFAMEAARIL  334 (337)
Q Consensus       263 ~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~Iit--------Y~A~~~a~~L  334 (337)
                      .+-++.+..+......|+.+-.-.+              .. +-++|+.    ..|++.+++        +.-.++.++|
T Consensus       160 g~d~~~i~~~s~~~~~P~i~~gG~~--------------~~-e~l~e~~----~~g~~a~~~gs~~~~~~~~i~e~k~~L  220 (237)
T 3cwo_X          160 GYDTEMIRFVRPLTTLPIIASGGAG--------------KM-EHFLEAF----LAGADAALAASVFHFREIDVRELKEYL  220 (237)
T ss_dssp             CCCHHHHHHHGGGCCSCEEEESCCC--------------SH-HHHHHHH----HHTCSEEEESHHHHTTSSCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHCCCCEEEECCCC--------------CH-HHHHHHH----HCCCCEEEEHHHHHCCCCCHHHHHHHH
T ss_conf             5437988877651102147656668--------------89-9999998----579815644015643898899999999


Q ss_pred             HC
Q ss_conf             50
Q gi|255764463|r  335 TH  336 (337)
Q Consensus       335 ~~  336 (337)
                      ++
T Consensus       221 ~~  222 (237)
T 3cwo_X          221 KK  222 (237)
T ss_dssp             HT
T ss_pred             HH
T ss_conf             98


No 152
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=39.06  E-value=20  Score=15.92  Aligned_cols=47  Identities=19%  Similarity=0.200  Sum_probs=24.4

Q ss_pred             CCCEEEECCCCCEEECCCCCCCC-CCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             31166675898811048887863-2889999999999998889367633
Q gi|255764463|r   41 ILPIFLTSGEKTVESINSMPDVM-RMSIDVAVEKIKQVADLGIPAIAIF   88 (337)
Q Consensus        41 I~PiFV~eg~~~k~~I~SMPGv~-R~Sid~L~~eie~~~~lGI~av~LF   88 (337)
                      +-|-+|+=-.+.++++.|=-|.. .-..+.|.+.++++.+.||+ |-||
T Consensus       114 ~kP~qvtLVPE~r~elTTegGlDv~~~~~~L~~~i~~Lk~~gIr-VSLF  161 (278)
T 3gk0_A          114 IRPHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGVR-VSLF  161 (278)
T ss_dssp             HCCSEEEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHTTCE-EEEE
T ss_pred             CCCCEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCC-EEEE
T ss_conf             69987998888855545557662062599999999999974981-7998


No 153
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.48A {Mesorhizobium loti MAFF303099}
Probab=38.74  E-value=20  Score=15.88  Aligned_cols=164  Identities=16%  Similarity=0.156  Sum_probs=87.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCC
Q ss_conf             86328899999999999988893676330256334554454215765379999999997301-44798613327100114
Q gi|255764463|r   61 DVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHG  139 (337)
Q Consensus        61 Gv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hG  139 (337)
                      +.+..+.+.+.+++++..+.|.++|-+=.+-.    |.      .   --.+.++++++.++ ++-++.|.. +.|    
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~Gf~~~Kik~G~~----d~------~---~di~~v~~ir~~~g~~~~l~vDaN-~~~----  201 (389)
T 2oz8_A          140 LDFHLDDDAFVSLFSHAASIGYSAFKIKVGHR----DF------D---RDLRRLELLKTCVPAGSKVMIDPN-EAW----  201 (389)
T ss_dssp             CBTTCCHHHHHHHHHHHHHTTCCEEEEECCCS----SH------H---HHHHHHHHHHTTSCTTCEEEEECT-TCB----
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCCEEECCCCCC----CH------H---HHHHHHHHHHHHHCCCCEEEECCC-CCC----
T ss_conf             67789999999999999867997784266778----77------8---899999999987456856985255-688----


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEE---E--CCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCC
Q ss_conf             3100136544628999999999999996289735---2--4667677999999999877885773003366643543010
Q gi|255764463|r  140 HDGILCDGEIVNDETIELISHAAVIQADAGADII---A--PSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGP  214 (337)
Q Consensus       140 HcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv---A--PSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgP  214 (337)
                                +.++.+..+.    ....+|.++.   -  |.+-.+|- ..+|+.      ..+++              
T Consensus       202 ----------~~~~A~~~~~----~~~~~~~~l~~iEeP~~~~d~~~l-~~L~~~------~~~~~--------------  246 (389)
T 2oz8_A          202 ----------TSKEALTKLV----AIREAGHDLLWVEDPILRHDHDGL-RTLRHA------VTWTQ--------------  246 (389)
T ss_dssp             ----------CHHHHHHHHH----HHHHTTCCCSEEESCBCTTCHHHH-HHHHHH------CCSSE--------------
T ss_pred             ----------CHHHHHHHHH----HHHHCCCCCEEECCCCCCCCHHHH-HHHHHH------CCCCC--------------
T ss_conf             ----------9999999999----998358782674589982126889-999862------57752--------------


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Q ss_conf             16753102446777744315721147889888876640898799553114589999999624998999934618999999
Q gi|255764463|r  215 YRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKA  294 (337)
Q Consensus       215 FRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~  294 (337)
                                . .+-..+  ++..    .++..  ...++|++.+|.|++-.=-|..+.+..++|+..=..+.+. ++..
T Consensus       247 ----------i-a~ee~~--~~~~----~~~li--~~~a~di~~~~GGit~~~~ia~~A~~~gi~~~~g~~~~~a-~~hl  306 (389)
T 2oz8_A          247 ----------I-NSGEYL--DLQG----KRLLL--EAHAADILNVHGQVTDVMRIGWLAAELGIPISIGNTFLEA-GVHM  306 (389)
T ss_dssp             ----------E-EECTTC--CHHH----HHHHH--HTTCCSEEEECSCHHHHHHHHHHHHHHTCCEEECCCGGGT-THHH
T ss_pred             ----------C-CCCCEE--CHHH----HHHHH--HCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEECCHHHHH-HHHH
T ss_conf             ----------3-565143--4476----89999--8699758887665546999999999849958567089999-9999


Q ss_pred             HHH
Q ss_conf             998
Q gi|255764463|r  295 ASL  297 (337)
Q Consensus       295 a~~  297 (337)
                      ++.
T Consensus       307 aaa  309 (389)
T 2oz8_A          307 AVA  309 (389)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             997


No 154
>1u83_A Phosphosulfolactate synthase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, lyase; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=38.68  E-value=20  Score=15.88  Aligned_cols=140  Identities=13%  Similarity=0.185  Sum_probs=69.3

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCC
Q ss_conf             88999999999999888936763302563345544542157653799999999973014479861332710011431001
Q gi|255764463|r   65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGIL  144 (337)
Q Consensus        65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~  144 (337)
                      +|+..+-+.++-+-+          .|+ -.|=..|+.+..++  +.+-|...|+.  ++.|.+.=-|=++-       +
T Consensus        50 l~l~~leD~Le~~g~----------yID-~vKfg~GTs~l~~~--L~eKI~l~~~~--~V~v~~GGTlfE~a-------~  107 (276)
T 1u83_A           50 YPLQFFKDAIAGASD----------YID-FVKFGWGTSLLTKD--LEEKISTLKEH--DITFFFGGTLFEKY-------V  107 (276)
T ss_dssp             CCHHHHHHHHHHHGG----------GCC-EEEECTTGGGGCTT--HHHHHHHHHHT--TCEEEECHHHHHHH-------H
T ss_pred             CCHHHHHHHHHHHHH----------HEE-EEEECCCEECCCHH--HHHHHHHHHHC--CCEEECCCHHHHHH-------H
T ss_conf             998999999997454----------525-88854853312689--99999999986--99697896899999-------9


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC----CCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHH
Q ss_conf             36544628999999999999996289735246676----77999999999877885773003366643543010167531
Q gi|255764463|r  145 CDGEIVNDETIELISHAAVIQADAGADIIAPSEMM----DGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAIS  220 (337)
Q Consensus       145 ~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMM----DGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~  220 (337)
                      ..|+      ++.+.+-   -.+-|.|+|-=||=.    +.+-..+.+.+.+ +|.   ++                   
T Consensus       108 ~q~~------~d~yl~~---~k~lGf~~IEISdGsi~i~~~~~~~~I~~~~~-~~~---V~-------------------  155 (276)
T 1u83_A          108 SQKK------VNEFHRY---CTYFGCEYIEISNGTLPMTNKEKAAYIADFSD-EFL---VL-------------------  155 (276)
T ss_dssp             HTTC------HHHHHHH---HHHTTCSEEEECCSSSCCCHHHHHHHHHHHTT-TSE---EE-------------------
T ss_pred             HHCC------HHHHHHH---HHHCCCCEEEECCCCCCCCHHHHHHHHHHHHH-CCE---EC-------------------
T ss_conf             8188------9999999---99859988997898012898999999999985-493---45-------------------


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf             02446777744315721147889888876640898799553
Q gi|255764463|r  221 TRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKP  261 (337)
Q Consensus       221 S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKP  261 (337)
                      |  .. |.|....-.+.+..+-+..+..|.+-||++|||.-
T Consensus       156 s--Ev-G~K~~~~~~~~~~~~~i~~~~~~LeAGA~~VIiEa  193 (276)
T 1u83_A          156 S--EV-GSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEA  193 (276)
T ss_dssp             E--EC-SCCC------CCSTHHHHHHHHHHHHTEEEEEEC-
T ss_pred             C--CC-CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEC
T ss_conf             4--35-77676435778999999999999977984899961


No 155
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=37.92  E-value=20  Score=15.80  Aligned_cols=49  Identities=6%  Similarity=0.176  Sum_probs=25.1

Q ss_pred             CCEEEECCCCCHHHCCCC---CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECC
Q ss_conf             447986133271001143---100136544628999999999999996289735246
Q gi|255764463|r  123 NIGIITDVALDPFTIHGH---DGILCDGEIVNDETIELISHAAVIQADAGADIIAPS  176 (337)
Q Consensus       123 dl~vi~DVcLc~YT~hGH---cGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPS  176 (337)
                      ||+|+-..||++|+..-+   ...+.  ......+++.|++.|..   -|..+++.+
T Consensus        47 dlvvfPE~~ltgy~~~~~~~~~~~~~--~~~~~~~~~~l~~~A~~---~~~~ii~G~   98 (291)
T 1f89_A           47 KLVVLPECFNSPYSTDQFRKYSEVIN--PKEPSTSVQFLSNLANK---FKIILVGGT   98 (291)
T ss_dssp             EEEECCTTTTSCSCHHHHHHHTTBCC--SSSCCHHHHHHHHHHHH---SSCEEECCC
T ss_pred             EEEECCCCCCCCCCHHHHHHHHHHHC--CCCCCHHHHHHHHHHHH---HCEEEEEEE
T ss_conf             89987786557887356788898733--24897999999999998---092999801


No 156
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=37.77  E-value=21  Score=15.79  Aligned_cols=74  Identities=19%  Similarity=0.134  Sum_probs=47.6

Q ss_pred             CHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCC---CC-----------CC---CCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf             379999999997301447986133271001143100---13-----------65---44628999999999999996289
Q gi|255764463|r  108 NLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGI---LC-----------DG---EIVNDETIELISHAAVIQADAGA  170 (337)
Q Consensus       108 glv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi---~~-----------~g---~IdND~Tl~~L~k~Al~~A~AGa  170 (337)
                      ..+..+++.+|+..++.-++ --|-.|+|--++.--   ..           +-   .-.-|...+.+.+-+..|.+|||
T Consensus       129 ~~~~~~i~~~~~~~~~~pli-gf~ggP~Tla~yl~~g~~~~~~~~~~~~~~~~pe~~~~ll~~~t~~~i~~~~~qi~aGa  207 (359)
T 2inf_A          129 PYVLETIKLLVNEQLNVPLI-GFSGAPFTLASYMTEGGPSKNYNKTKAFMYSMPDAWNLLMSKLADMIIVYVKAQIKAGA  207 (359)
T ss_dssp             HHHHHHHHHHHHHTCSSCEE-EEEECHHHHHHHHHHCSCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHCCCCCCEE-EECCCHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99999999986224666426-43176898999986174302268888787658578999999999999999999997079


Q ss_pred             CEEECCCCCCCH
Q ss_conf             735246676779
Q gi|255764463|r  171 DIIAPSEMMDGR  182 (337)
Q Consensus       171 DivAPSdMMDGr  182 (337)
                      |+|..-|..=|.
T Consensus       208 d~i~ifDs~a~~  219 (359)
T 2inf_A          208 KAIQIFDSWVGA  219 (359)
T ss_dssp             SEEEEECTTGGG
T ss_pred             CEEEEECCHHHH
T ss_conf             889970764565


No 157
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=37.68  E-value=13  Score=17.10  Aligned_cols=32  Identities=25%  Similarity=0.410  Sum_probs=23.4

Q ss_pred             CCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHH
Q ss_conf             211478898888766408987995531145899
Q gi|255764463|r  236 PANVQEAIREASIDIQESADMLLVKPGLPYLDV  268 (337)
Q Consensus       236 ~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDi  268 (337)
                      ..++.||+..+....++| |+|+++||.++.|.
T Consensus       399 ~~d~~eAi~~a~~~~~~g-DiVLls~a~aSfD~  430 (451)
T 3lk7_A          399 ALDVRDAVHKAYEVAQQG-DVILLSPANASWDM  430 (451)
T ss_dssp             CSSHHHHHHHHHHHCCTT-CEEEECCSSCSTTT
T ss_pred             CCCHHHHHHHHHHHCCCC-CEEEECCCCCCHHH
T ss_conf             499999999999858997-99997795504212


No 158
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=37.46  E-value=21  Score=15.75  Aligned_cols=136  Identities=19%  Similarity=0.224  Sum_probs=77.7

Q ss_pred             HHHHHHHHHCC--CEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEC-----CCC-------
Q ss_conf             99999973014--4798613327100114310013654462899999999999999628973524-----667-------
Q gi|255764463|r  113 GICAIKKNIPN--IGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAP-----SEM-------  178 (337)
Q Consensus       113 AIr~IK~~fpd--l~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAP-----SdM-------  178 (337)
                      .+++|++.+|+  ++-+.|.+-.||-+--           -++-.....++.-.+-+.|+|.|.=     |-.       
T Consensus        15 v~~~l~~~~p~~~~iy~~D~~~~PYG~ks-----------~e~i~~~~~~~~~~L~~~~~~~IviaCNTa~a~~~~~l~~   83 (254)
T 1b73_A           15 VLKAIRNRYRKVDIVYLGDTARVPYGIRS-----------KDTIIRYSLECAGFLKDKGVDIIVVACNTASAYALERLKK   83 (254)
T ss_dssp             HHHHHHHHSTTCEEEEEECTTTCCCTTSC-----------HHHHHHHHHHHHHHHHTTTCSEEEECCHHHHTTSHHHHHH
T ss_pred             HHHHHHHHCCCCCEEEEECCCCCCCCCCC-----------HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHH
T ss_conf             99999997899988999468889999899-----------9999999999999999769999999378578999999998


Q ss_pred             -----CCCH-HHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHC------CCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             -----6779-999999998778857730033666435430101675310------2446777744315721147889888
Q gi|255764463|r  179 -----MDGR-VQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAIST------RDLLKGDKKTYYLDPANVQEAIREA  246 (337)
Q Consensus       179 -----MDGr-V~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S------~p~~~gdr~sYQmd~~n~~eA~~e~  246 (337)
                           +=|- .-+++.++...+...+++|+-.+-..|.+|--.-...+.      .|.+..-...-+.+.....+.+.+.
T Consensus        84 ~~~ipvi~ii~~~~~~a~~~~~~~~VgvLAT~~Ti~s~~Y~~~l~~~g~~v~~~~~~~lv~~ie~~~~~~~~~~~~~~~~  163 (254)
T 1b73_A           84 EINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSGAYQRKLEEGGADVFAKACPLFAPLAEEGLLEGEITRKVVEHY  163 (254)
T ss_dssp             HSSSCEEESHHHHHHHHHHHCSSCEEEEEECHHHHHHCHHHHHHHTTSCEEEEEECCCCTTTSCGGGGSGGGHHHHHHHH
T ss_pred             HCCCCEEECCCHHHHHHHHHCCCCEEEEEEEHHHHHCHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf             63798760562879999972678759999606666567999999855995996087789999983654675789999999


Q ss_pred             HHHHHCCCCEEEE
Q ss_conf             8766408987995
Q gi|255764463|r  247 SIDIQESADMLLV  259 (337)
Q Consensus       247 ~~D~~EGAD~lMV  259 (337)
                      .....+++|.+..
T Consensus       164 l~~l~~~~d~iIL  176 (254)
T 1b73_A          164 LKEFKGKIDTLIL  176 (254)
T ss_dssp             STTTTTTCSEEEE
T ss_pred             HHHHHCCCCEEEE
T ss_conf             9864314898999


No 159
>1s8n_A Putative antiterminator; structural genomics, transcriptional antiterminator, two component system, PSI; 1.48A {Mycobacterium tuberculosis H37RV} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=36.98  E-value=21  Score=15.70  Aligned_cols=21  Identities=24%  Similarity=0.466  Sum_probs=11.1

Q ss_pred             HHHHHHHHHHCCCEEEECCCCC
Q ss_conf             9999999730144798613327
Q gi|255764463|r  112 EGICAIKKNIPNIGIITDVALD  133 (337)
Q Consensus       112 rAIr~IK~~fpdl~vi~DVcLc  133 (337)
                      .|++.+++.-||+ |++|+.+-
T Consensus        49 eal~~~~~~~pDl-illDi~MP   69 (205)
T 1s8n_A           49 EAVELAELHKPDL-VIMDVKMP   69 (205)
T ss_dssp             HHHHHHHHHCCSE-EEEESSCS
T ss_pred             HHHHHHHHCCCCE-EEEECCCC
T ss_conf             9999998379999-99964045


No 160
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=36.96  E-value=21  Score=15.70  Aligned_cols=43  Identities=16%  Similarity=0.064  Sum_probs=24.2

Q ss_pred             HHHHHHHHHHHCCCCEEEECC-----------CHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             889888876640898799553-----------1145899999996249989999
Q gi|255764463|r  241 EAIREASIDIQESADMLLVKP-----------GLPYLDVCFRIKEKFGLPTFAY  283 (337)
Q Consensus       241 eA~~e~~~D~~EGAD~lMVKP-----------a~~yLDii~~~k~~~~~P~~aY  283 (337)
                      |++.-+.+-.+.|.|++-|--           -..++.....+|+.+.+||.+-
T Consensus       230 ~~~~~~~~l~~~g~d~~~~~~g~~~~~~~~~~~~~~~~~~~~ik~~~~~pvi~~  283 (340)
T 3gr7_A          230 DYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAV  283 (340)
T ss_dssp             GHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEE
T ss_pred             HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf             999999999864755364322401266567788631379999999749868997


No 161
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=36.51  E-value=21  Score=15.66  Aligned_cols=142  Identities=16%  Similarity=0.078  Sum_probs=81.2

Q ss_pred             CCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEE---EEEECCCCCCCCCCCC-CCCCCCCH--HHHHHH
Q ss_conf             11666758988110488878632889999999999998889367---6330256334554454-21576537--999999
Q gi|255764463|r   42 LPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAI---AIFPNIPMDLRNNTGS-HIIDPDNL--INEGIC  115 (337)
Q Consensus        42 ~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av---~LFp~I~~~~Kd~~Gs-eA~n~dgl--v~rAIr  115 (337)
                      .|+||.-|.+.-+           +.+.+++.++++.++|.+.+   +-+|.   ..+...++ ..+...|.  ..+..+
T Consensus        40 ~pl~IIAGpcs~e-----------~~e~~le~A~~lk~~g~~~~r~~~~Kp~---t~~~~~~~~~~~~~~g~~~~l~~l~  105 (298)
T 3fs2_A           40 APLALIAGPCQME-----------TRDHAFEMAGRLKEMTDKLGIGLVYKSS---FDKANRTSLKAARGIGLEKALEVFS  105 (298)
T ss_dssp             SCCEEEEECSBCC-----------CHHHHHHHHHHHHHHHHHHTCCEEEECB---CCCCC---------CCHHHHHHHHH
T ss_pred             CEEEEEEECCCCC-----------CHHHHHHHHHHHHHHHHHHCCCEEEECC---CCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             8069997068557-----------9999999999999988884858299178---7776667787757688899999999


Q ss_pred             HHHHHHCCCEEEECC---CCCHHHCCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC---CCHHHHHH
Q ss_conf             999730144798613---327100114310013--6544628999999999999996289735246676---77999999
Q gi|255764463|r  116 AIKKNIPNIGIITDV---ALDPFTIHGHDGILC--DGEIVNDETIELISHAAVIQADAGADIIAPSEMM---DGRVQEIR  187 (337)
Q Consensus       116 ~IK~~fpdl~vi~DV---cLc~YT~hGHcGi~~--~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMM---DGrV~aIR  187 (337)
                      .+|+++. +.++|++   +...+...+=+ ++.  -..+.|-.-++.+++       .|.-|+--..|.   +--+.++.
T Consensus       106 ~~~~e~g-l~~~Te~~d~~~~~~~~~~vd-~~kIga~~~~n~~Ll~~~a~-------t~kPV~lk~G~~~s~~e~~~Ave  176 (298)
T 3fs2_A          106 DLKKEYG-FPVLTDIHTEEQCAAVAPVVD-VLQIPAFLCRQTDLLIAAAR-------TGRVVNVKKGQFLAPWDMKNVLA  176 (298)
T ss_dssp             HHHHHHC-CCEEEECCSHHHHHHHTTTCS-EEEECGGGTTCHHHHHHHHH-------TTSEEEEECCTTCCGGGHHHHHH
T ss_pred             HHHHHHC-CCEEEECCCHHHHHHHHCCCC-EEEECCCCCCCHHHHHHHHH-------CCCCEEECCCCCCCHHHHHHHHH
T ss_conf             9999849-943343366888987502355-14533311468799999987-------19956622678899899987889


Q ss_pred             HHHHHCCCCCCCEECHHHHH
Q ss_conf             99987788577300336664
Q gi|255764463|r  188 KKLDSHGHINVGIMPYVAKF  207 (337)
Q Consensus       188 ~~Ld~~g~~~~~ImsYsaKf  207 (337)
                      . +.+.|..++.++-..+.|
T Consensus       177 ~-i~~~Gn~~v~l~~rg~~~  195 (298)
T 3fs2_A          177 K-ITESGNPNVLATERGVSF  195 (298)
T ss_dssp             H-HHTTTCCCEEEEECCEEC
T ss_pred             H-HHHCCCCEEEEECCCCCC
T ss_conf             9-984798649982885234


No 162
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=36.39  E-value=22  Score=15.64  Aligned_cols=64  Identities=19%  Similarity=0.283  Sum_probs=37.9

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC---C-----------CCC-CH---HHHHHHHHHHHHCCCEEEE
Q ss_conf             9999999999998889367633025633455445421---5-----------765-37---9999999997301447986
Q gi|255764463|r   67 IDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHI---I-----------DPD-NL---INEGICAIKKNIPNIGIIT  128 (337)
Q Consensus        67 id~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA---~-----------n~d-gl---v~rAIr~IK~~fpdl~vi~  128 (337)
                      ...+.+.+..+.+|||++|-|=|..+.......|-..   |           +|. |-   ..+.|++++++  .|-||-
T Consensus        20 ~~gi~~kLdylk~LGv~~I~L~Pi~~~~~~~~~GY~~~~~y~~~~~~~~~~vd~~~Gt~~df~~LV~~~H~~--GI~Vil   97 (483)
T 3bh4_A           20 WKRLQNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSR--NVQVYG   97 (483)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEECCCSEESSTTSCSSSEEETTCSSCSCCSSCSSCSSCCHHHHHHHHHHHHHT--TCEEEE
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEE
T ss_conf             999999789999749988996957118888988977556766543445676588899999999999999988--998999


Q ss_pred             CCCC
Q ss_conf             1332
Q gi|255764463|r  129 DVAL  132 (337)
Q Consensus       129 DVcL  132 (337)
                      ||-+
T Consensus        98 DvV~  101 (483)
T 3bh4_A           98 DVVL  101 (483)
T ss_dssp             EECC
T ss_pred             EECC
T ss_conf             9786


No 163
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=35.99  E-value=22  Score=15.60  Aligned_cols=72  Identities=17%  Similarity=0.249  Sum_probs=45.8

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC--CCCCCCCCCCCCC--HHHHHHHHHHHHH-CCCEEEECCCCCHHHC
Q ss_conf             28899999999999988893676330256334--5544542157653--7999999999730-1447986133271001
Q gi|255764463|r   64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDL--RNNTGSHIIDPDN--LINEGICAIKKNI-PNIGIITDVALDPFTI  137 (337)
Q Consensus        64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~--Kd~~GseA~n~dg--lv~rAIr~IK~~f-pdl~vi~DVcLc~YT~  137 (337)
                      ..|.+.+.++++++.+.|.+++-+-.+.+..-  ++.. ...+.+.+  --.+.++++++.+ |++.++.| |-+.||.
T Consensus       147 ~~s~e~~~~~a~~~~~~Gf~~~Kikvg~~~~~~~~~~~-~~~~~~~d~~~di~~v~avr~~~G~~~~l~vD-aN~~~~~  223 (410)
T 2qq6_A          147 EGSNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFW-NGAISPREHEAMVARVAAVREAVGPEVEVAID-MHGRFDI  223 (410)
T ss_dssp             STHHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSS-SCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEE-CTTCCCH
T ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHCCCCEEECC-CCCCCCH
T ss_conf             58999999999999977998899713676775333333-56778365899999999999973985426426-6667898


No 164
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=35.55  E-value=20  Score=15.88  Aligned_cols=38  Identities=26%  Similarity=0.198  Sum_probs=29.1

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf             46777744315721147889888876640898799553
Q gi|255764463|r  224 LLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKP  261 (337)
Q Consensus       224 ~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKP  261 (337)
                      .+.-||..|..|+-+.---+-|+.+-|.|||.|+=-|-
T Consensus       116 ~~HI~K~~F~vPFVCGarnLGEALRRI~EGAaMIRTKG  153 (305)
T 2nv1_A          116 EFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKG  153 (305)
T ss_dssp             SCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECC
T ss_pred             CCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf             10165102766633378972899998860032312679


No 165
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=35.52  E-value=22  Score=15.55  Aligned_cols=64  Identities=11%  Similarity=0.118  Sum_probs=40.7

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHH
Q ss_conf             8786328899999999999988893676330256334554454215765379999999997301-44798613327100
Q gi|255764463|r   59 MPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFT  136 (337)
Q Consensus        59 MPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT  136 (337)
                      +++....+.+.+++++++..+.|.+.+.+..+..+-.+|             .+.++++++.++ +..++.|.. +.||
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~g~~~~K~k~g~~~~~~d-------------i~~v~~vr~~~g~~~~l~vDaN-~~~~  206 (391)
T 2qgy_A          142 CWSDLKKDTNDYLRQIEKFYGKKYGGIKIYPMLDSLSIS-------------IQFVEKVREIVGDELPLMLDLA-VPED  206 (391)
T ss_dssp             CCCSSCCCHHHHHHHHHHHHHTTCSCEEECCCCSSHHHH-------------HHHHHHHHHHHCSSSCEEEECC-CCSC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH-------------HHHHHHHHHHCCCCCEEECCCC-CCCC
T ss_conf             145555678999999998653002541023446436789-------------9999999986376300001322-3568


No 166
>1v93_A 5,10-methylenetetrahydrofolate reductase; flavoprotein, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 1.90A {Thermus thermophilus HB8} SCOP: c.1.23.1
Probab=35.50  E-value=22  Score=15.55  Aligned_cols=142  Identities=13%  Similarity=0.114  Sum_probs=78.1

Q ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-CEEEECCC
Q ss_conf             11048887863288999999999999888936763302563345544542157653799999999973014-47986133
Q gi|255764463|r   53 VESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPN-IGIITDVA  131 (337)
Q Consensus        53 k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpd-l~vi~DVc  131 (337)
                      .++|+-+.... .+...+...+..+.++||++|++-.+=++...+....... ...-...-++.+++.+++ +.+-  |+
T Consensus        72 ~~~i~Hltcr~-~n~~~l~~~l~~~~~~GI~niLal~GD~p~~~~~~~~~~~-~~~~a~~Li~~i~~~~~~~~~ig--va  147 (296)
T 1v93_A           72 LNPLAHLTVAG-QSRKEVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPE-GFRYAAELVALIRERYGDRVSVG--GA  147 (296)
T ss_dssp             CCEEEEECCTT-SCHHHHHHHHHHHHHTTCCEEEECCCCCCTTCSSCCCCTT-SCSSHHHHHHHHHHHHGGGSEEE--EE
T ss_pred             CCCEEEEEEEC-CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHCCCCCCCC--CC
T ss_conf             98502577636-9788899999999981988676614887665767788742-12679999999997256554555--55


Q ss_pred             CCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCC-CHHHHHHHHHHHCCCCC---CCEECHHHHH
Q ss_conf             2710011431001365446289999999999999962897352466767-79999999998778857---7300336664
Q gi|255764463|r  132 LDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMD-GRVQEIRKKLDSHGHIN---VGIMPYVAKF  207 (337)
Q Consensus       132 Lc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMD-GrV~aIR~~Ld~~g~~~---~~ImsYsaKf  207 (337)
                         .-..||-..     -+-+..++.|    ..-.+||||.+---=.-| -.....++.+..+|..-   .+||.- +.+
T Consensus       148 ---~~Peghp~~-----~~~~~di~~l----~~K~~aGA~f~iTQ~~fd~~~~~~~~~~~r~~gi~~Pii~GI~pi-~s~  214 (296)
T 1v93_A          148 ---AYPEGHPES-----ESLEADLRHF----KAKVEAGLDFAITQLFFNNAHYFGFLERARRAGIGIPILPGIMPV-TSY  214 (296)
T ss_dssp             ---ECTTCCTTC-----SSHHHHHHHH----HHHHHTTCSEEEEEECSSHHHHHHHHHHHHHTTCCSCEEEEECCC-CCH
T ss_pred             ---CCCCCCCCC-----CHHHHHHHHH----HHHHHCCCCEEEEEEEECHHHHHHHHHHHHHCCCCCCEEEEECCH-HHH
T ss_conf             ---688778641-----3399999999----999981887066211662899999999999759997679862562-689


Q ss_pred             HHHH
Q ss_conf             3543
Q gi|255764463|r  208 NSSF  211 (337)
Q Consensus       208 aS~f  211 (337)
                      ...+
T Consensus       215 ~~l~  218 (296)
T 1v93_A          215 RQLR  218 (296)
T ss_dssp             HHHH
T ss_pred             HHHH
T ss_conf             9999


No 167
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle; 2.00A {Geobacillus SP}
Probab=35.16  E-value=23  Score=15.51  Aligned_cols=105  Identities=16%  Similarity=0.151  Sum_probs=60.7

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCH--------HHHHHHHHHHHH-C-CCEEEECCCCCH-
Q ss_conf             89999999999998889367633025633455445421576537--------999999999730-1-447986133271-
Q gi|255764463|r   66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNL--------INEGICAIKKNI-P-NIGIITDVALDP-  134 (337)
Q Consensus        66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dgl--------v~rAIr~IK~~f-p-dl~vi~DVcLc~-  134 (337)
                      .+..+.+.+..+.++||++|-|-|+.+...    +..-|++-++        -....+.+-++. - .|.||.||.+-. 
T Consensus        29 d~~gl~~~LdyLk~lGv~~I~l~Pi~~~~~----~~~GY~~~d~~~vd~~~Gt~~dfk~lv~~aH~~Gi~VilD~V~NH~  104 (555)
T 2ze0_A           29 DLRGIIEKLDYLVELGVDIVWICPIYRSPN----ADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDLVINHT  104 (555)
T ss_dssp             CHHHHHHTHHHHHHHTCCEEEECCCEECCC----TTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEECSBC
T ss_pred             CHHHHHHHHHHHHHCCCCEEEECCCCCCCC----CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             999999833899975998799696736999----9989685466874712499999999999999889989999896626


Q ss_pred             -----------------HHCCC-----CC---------------------------CCC----CCCCCCHHHHHHHHHHH
Q ss_conf             -----------------00114-----31---------------------------001----36544628999999999
Q gi|255764463|r  135 -----------------FTIHG-----HD---------------------------GIL----CDGEIVNDETIELISHA  161 (337)
Q Consensus       135 -----------------YT~hG-----Hc---------------------------Gi~----~~g~IdND~Tl~~L~k~  161 (337)
                                       |.++.     .+                           +..    .+-.-.|.++.+.+.+.
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  184 (555)
T 2ze0_A          105 SDEHPWFIESRSSRDNPKRDWYIWRDGKDGREPNNWESIFGGSAWQYDERTGQYYLHIFDVKQPDLNWENSEVRQALYEM  184 (555)
T ss_dssp             CTTSHHHHHHHHCSSSTTGGGBCEECCBTTBCSSCEECTTSSBSEEEETTTTEEEECSSCTTCCBBCTTCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             58760365542057887544310157767889986534479974423566650342246788862034687999999999


Q ss_pred             HHHHHHCCCCEEE
Q ss_conf             9999962897352
Q gi|255764463|r  162 AVIQADAGADIIA  174 (337)
Q Consensus       162 Al~~A~AGaDivA  174 (337)
                      ..-..+-|+|.+-
T Consensus       185 ~~~~~~~gvdg~R  197 (555)
T 2ze0_A          185 VNWWLDKGIDGFR  197 (555)
T ss_dssp             HHHHHHHTCCEEE
T ss_pred             HHHHHHCCCCEEE
T ss_conf             9999973997465


No 168
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid, csgid, Mg-bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} PDB: 3ieb_A*
Probab=35.07  E-value=23  Score=15.51  Aligned_cols=96  Identities=18%  Similarity=0.214  Sum_probs=53.6

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCC
Q ss_conf             28899999999999988893676330256334554454215765379999999997301447986133271001143100
Q gi|255764463|r   64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGI  143 (337)
Q Consensus        64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi  143 (337)
                      ..+++..++.++++.. +|-.+- . +.+-. .+         .|  ...|+.+|+.+|+..++.|.=+..         
T Consensus        15 ~~~~~~~~~~~~~~~~-~vd~ik-i-g~~l~-~~---------~G--~~~i~~l~~~~~~~~i~~D~K~~D---------   70 (218)
T 3jr2_A           15 QTNLTDAVAVASNVAS-YVDVIE-V-GTILA-FA---------EG--MKAVSTLRHNHPNHILVCDMKTTD---------   70 (218)
T ss_dssp             CSSHHHHHHHHHHHGG-GCSEEE-E-CHHHH-HH---------HT--THHHHHHHHHCTTSEEEEEEEECS---------
T ss_pred             CCCHHHHHHHHHHCCC-CCCEEE-E-EEECH-HH---------CC--HHHHHHHHHHCCCCEEEEEEECCC---------
T ss_conf             8999999999996388-765899-4-56426-53---------59--999999997578973999985145---------


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC-CCHHHHHHHHHHHCCCC
Q ss_conf             136544628999999999999996289735246676-77999999999877885
Q gi|255764463|r  144 LCDGEIVNDETIELISHAAVIQADAGADIIAPSEMM-DGRVQEIRKKLDSHGHI  196 (337)
Q Consensus       144 ~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMM-DGrV~aIR~~Ld~~g~~  196 (337)
                             +..|+.      -..+++|+|++--.... ...+.+..++..+.|..
T Consensus        71 -------i~~~~~------~~~~~~gad~itvh~~~~~~~l~~~~~~~~~~g~~  111 (218)
T 3jr2_A           71 -------GGAILS------RMAFEAGADWITVSAAAHIATIAACKKVADELNGE  111 (218)
T ss_dssp             -------CHHHHH------HHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCE
T ss_pred             -------CCHHHH------HHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCC
T ss_conf             -------727788------99887449899995034547899999987641884


No 169
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=35.04  E-value=23  Score=15.50  Aligned_cols=102  Identities=17%  Similarity=0.132  Sum_probs=56.9

Q ss_pred             CCCCCCHH-----HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--CEEEECCCCC
Q ss_conf             86328899-----9999999999888936763302563345544542157653799999999973014--4798613327
Q gi|255764463|r   61 DVMRMSID-----VAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPN--IGIITDVALD  133 (337)
Q Consensus        61 Gv~R~Sid-----~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpd--l~vi~DVcLc  133 (337)
                      |+.-||+-     .+...++.+.++|..+|=||+....  .+..+  -+++.......++.+|+...+  |-+.+     
T Consensus        24 g~~~ys~~~~~~~dl~~~L~~~a~~G~~~VEl~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~l~~~Gl~i~s-----   94 (305)
T 3obe_A           24 GLQTYSLGQELLQDMPNGLNRLAKAGYTDLEIFGYRED--TGKFG--DYNPKNTTFIASKDYKKMVDDAGLRISS-----   94 (305)
T ss_dssp             EEEGGGGTHHHHTTHHHHHHHHHHHTCCEEEECCBCTT--TCCBC--CC----CCCBCHHHHHHHHHHTTCEEEE-----
T ss_pred             EEEEEECCCCHHCCHHHHHHHHHHHCCCEEEECCCCCC--CCCCC--CCCCCCCCHHHHHHHHHHHHHCCCEEEE-----
T ss_conf             99984537671139999999999849997998776664--21123--4474111232099999999984986854-----


Q ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             10011431001365446289999999999999962897352
Q gi|255764463|r  134 PFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIA  174 (337)
Q Consensus       134 ~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA  174 (337)
                         .|...+......-.-++.++.+.+..-..++.|++++.
T Consensus        95 ---~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~~~  132 (305)
T 3obe_A           95 ---SHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMV  132 (305)
T ss_dssp             ---EBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred             ---CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_conf             ---26653324675788999999999999999985997577


No 170
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=34.69  E-value=23  Score=15.46  Aligned_cols=154  Identities=14%  Similarity=0.120  Sum_probs=86.4

Q ss_pred             CCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC--------------CCCCCCC
Q ss_conf             33116667589881104888786328899999999999988893676330256334554--------------4542157
Q gi|255764463|r   40 LILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNN--------------TGSHIID  105 (337)
Q Consensus        40 LI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~--------------~GseA~n  105 (337)
                      .||=+.|.+= .........+.-.+-....+.+.+..+.+|||++|-|-|+-+.-.-++              ...+.|+
T Consensus       269 vIYE~hvr~f-t~~~~~~~~~~~~~G~~~gi~ekLdYLk~LGvtaI~L~Pi~e~~~~d~~~~~~~~~~~~~~~~~~wGYd  347 (877)
T 3faw_A          269 VIYEAHVRDF-TSDQSLDGKLKNQLGTFAAFSEKLDYLQKLGVTHIQLLPVLSYFYVNEMDKSRSTAYTSSDNNYNWGYD  347 (877)
T ss_dssp             EEEEECTTGG-GCCGGGTTTCSSCTTSHHHHGGGHHHHHHHTCSEEEESCCBCBSSCBTTCCCCCCSCCSSSCSCCCSCS
T ss_pred             EEEEEECCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             8999806705-778888875524562799999767899975998899697523576453122355554567787776656


Q ss_pred             CC-----------------CHHHHHHHHHHHHHC-CCEEEECCCCCHHHCC--------------CCCCCCCC------C
Q ss_conf             65-----------------379999999997301-4479861332710011--------------43100136------5
Q gi|255764463|r  106 PD-----------------NLINEGICAIKKNIP-NIGIITDVALDPFTIH--------------GHDGILCD------G  147 (337)
Q Consensus       106 ~d-----------------glv~rAIr~IK~~fp-dl~vi~DVcLc~YT~h--------------GHcGi~~~------g  147 (337)
                      +-                 +-+..--+.|++.-. .|.||.||-.......              ..+|-..+      -
T Consensus       348 ~~~y~a~~~~ygt~~~~~~~~~~efk~lV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~~y~~~~~~g~~~~~~g~~~~  427 (877)
T 3faw_A          348 PQSYFALSGMYSEKPKDPSARIAELKQLIHDIHKRGMGVILDVVYNHTAKTYLFEDIEPNYYHFMNEDGSPRESFGGGRL  427 (877)
T ss_dssp             BSCSSSBCSTTCSCTTSTTHHHHHHHHHHHHHHHTTCEEEEEECTTCCSCTHHHHTTSTTTSBCBCTTSCBCEETTEECB
T ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
T ss_conf             24353547533667567545699999999987455998986110256534354346788644101789985578898865


Q ss_pred             CCCHHHHHHHHHHHHHHHH-HCCCCEEE---CCCCCCCHHHHHHHHHHHCC
Q ss_conf             4462899999999999999-62897352---46676779999999998778
Q gi|255764463|r  148 EIVNDETIELISHAAVIQA-DAGADIIA---PSEMMDGRVQEIRKKLDSHG  194 (337)
Q Consensus       148 ~IdND~Tl~~L~k~Al~~A-~AGaDivA---PSdMMDGrV~aIR~~Ld~~g  194 (337)
                      .-.|.+..+.+...+.-.+ +-|.|-.-   -..|.......++..++...
T Consensus       428 n~~~~~vr~~i~d~~~~W~~e~gVDGfR~D~~~~~~~~~~~~~~~~~~~~~  478 (877)
T 3faw_A          428 GTTHAMSRRVLVDSIKYLTSEFKVDGFRFDMMGDHDAAAIELAYKEAKAIN  478 (877)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSBHHHHHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHHCC
T ss_conf             778989999999988866877098558660422246245555567663017


No 171
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=34.65  E-value=23  Score=15.46  Aligned_cols=57  Identities=14%  Similarity=0.232  Sum_probs=32.6

Q ss_pred             CCCCCCC-HHHHHHHHHHHHHHCCCCEEEEC---CCHHHHHHHHHHHHHCCCCEEEEECCHHHH
Q ss_conf             4315721-14788988887664089879955---311458999999962499899993461899
Q gi|255764463|r  231 TYYLDPA-NVQEAIREASIDIQESADMLLVK---PGLPYLDVCFRIKEKFGLPTFAYQVSGEYA  290 (337)
Q Consensus       231 sYQmd~~-n~~eA~~e~~~D~~EGAD~lMVK---Pa~~yLDii~~~k~~~~~P~~aYqVSGEYa  290 (337)
                      .|+...+ |..+|+.....   +--|++++-   |++.=+++++.+|+...+|+...--.++-.
T Consensus        25 g~~v~~a~~~~~al~~~~~---~~~dlil~D~~mp~~~G~~l~~~ir~~~~ipiI~lt~~~~~~   85 (121)
T 1zh2_A           25 GMRVFEAETLQRGLLEAAT---RKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEES   85 (121)
T ss_dssp             TCEEEEESSHHHHHHHHHH---HCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCSHH
T ss_pred             CCEEEEECCHHHHHHHHHH---CCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCHH
T ss_conf             9999998889999999971---799999980999998979999999974799099997859999


No 172
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=34.04  E-value=23  Score=15.40  Aligned_cols=62  Identities=10%  Similarity=0.075  Sum_probs=41.5

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHH
Q ss_conf             786328899999999999988893676330256334554454215765379999999997301-4479861332710
Q gi|255764463|r   60 PDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPF  135 (337)
Q Consensus        60 PGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~Y  135 (337)
                      ......+.+.+.++++.+.+.|.+.|-+-.+...-.             ---+.|+++++.+| ++.++.|. -+.|
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~Gf~~~K~Kvg~~~~~-------------~di~~v~~ir~~~g~~~~l~vDa-N~~~  202 (371)
T 2ovl_A          140 GIDLELPVADLKTQADRFLAGGFRAIKMKVGRPDLK-------------EDVDRVSALREHLGDSFPLMVDA-NMKW  202 (371)
T ss_dssp             CCBTTSCHHHHHHHHHHHHHTTCSCEEEECCCSSHH-------------HHHHHHHHHHHHHCTTSCEEEEC-TTCS
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHH-------------HHHHHHHHHHHHCCCCCEEEECC-CCCC
T ss_conf             446789999999999999973887783045766479-------------99999999998758762277636-7789


No 173
>3no1_A Isomerase, mandelate racemase/muconate lactonizing enzyme; enolase,metal-binding,PSI-II, NYSGXRC, structural genomics; 2.16A {Marine actinobacterium PHSC20C1} PDB: 3msy_A
Probab=33.64  E-value=24  Score=15.35  Aligned_cols=65  Identities=11%  Similarity=0.069  Sum_probs=39.5

Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHCCC
Q ss_conf             86328899999999999988893676330256334554454215765379999999997301-44798613327100114
Q gi|255764463|r   61 DVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTIHG  139 (337)
Q Consensus        61 Gv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~hG  139 (337)
                      +....+.+.+.+++++..+.|.+++-+=.+-. +.+            --.+.++++++.++ ++.++.| |-+.||..-
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~Gf~~~Kik~~~~-~~~------------~d~~~v~~~r~~~g~~~~l~vD-an~~~~~~~  226 (398)
T 3no1_A          161 GYYGEPLGSIADEMHNYQELGLAGVKFKVGGL-SAA------------EDAARITAAREAAGDDFIICID-ANQGYKPAV  226 (398)
T ss_dssp             CCTTCTTCCHHHHHHHHHHTTBSEEEEECSSS-CHH------------HHHHHHHHHHHHHCSSSEEEEE-CTTCBCHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC-CHH------------HHHHHHHHHHHHCCCCCEEECC-CCCCCCHHH
T ss_conf             13689667999999997644875377525899-989------------9999999999875998489513-445568999


No 174
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver domain, target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=33.56  E-value=24  Score=15.35  Aligned_cols=71  Identities=18%  Similarity=0.172  Sum_probs=47.9

Q ss_pred             CCCCCCC-HHHHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf             4315721-1478898888766408987995---53114589999999624-99899993461899999999888978
Q gi|255764463|r  231 TYYLDPA-NVQEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN  302 (337)
Q Consensus       231 sYQmd~~-n~~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d  302 (337)
                      .|+...+ |..||+.... +..+.-|++.+   =|++.=+++++.+++.. ..|+...-..++......|-+.|..|
T Consensus        27 g~~v~~a~~~~eal~~~~-~~~~~~dlvilD~~mp~~~G~~l~~~~~~~~~~~pvI~lT~~~~~~~~~~a~~~Ga~d  102 (143)
T 3jte_A           27 GNEVLTASSSTEGLRIFT-ENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGDLDNAILAMKEGAFE  102 (143)
T ss_dssp             TCEEEEESSHHHHHHHHH-HTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHHTTCSE
T ss_pred             CCEEEEECCHHHHHHHHH-HCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCE
T ss_conf             999999788999999998-4599973999747777778899999999878999699998889999999999869989


No 175
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicusatcc 33223} PDB: 3krz_A*
Probab=33.38  E-value=24  Score=15.33  Aligned_cols=43  Identities=19%  Similarity=0.090  Sum_probs=27.5

Q ss_pred             HHHHHHHHHHHHCCCCEEEEC-----------CCHHHHHHHHHHHHHCCCCEEE
Q ss_conf             788988887664089879955-----------3114589999999624998999
Q gi|255764463|r  240 QEAIREASIDIQESADMLLVK-----------PGLPYLDVCFRIKEKFGLPTFA  282 (337)
Q Consensus       240 ~eA~~e~~~D~~EGAD~lMVK-----------Pa~~yLDii~~~k~~~~~P~~a  282 (337)
                      -+...+...-++++.|.+.+-           +....++....+|+.+++||.+
T Consensus       229 ~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~pvi~  282 (343)
T 3kru_A          229 IDMMVEYINMIKDKVDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSA  282 (343)
T ss_dssp             HHHHHHHHHHHTTTCSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEE
T ss_pred             HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEE
T ss_conf             799999999988634430220255545555777532167999999974988899


No 176
>2e55_A Uracil phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.15A {Aquifex aeolicus}
Probab=33.26  E-value=24  Score=15.31  Aligned_cols=51  Identities=12%  Similarity=0.132  Sum_probs=35.7

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHH
Q ss_conf             999999999999888936763302563345544542157653799999999973014479861332710
Q gi|255764463|r   67 IDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPF  135 (337)
Q Consensus        67 id~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~Y  135 (337)
                      =.++...++.+.+.|.+.|.+.-.+..                 +..|+.+.++||++-|+| .|.|+-
T Consensus       134 G~s~~~ai~~L~~~g~~~I~~v~~iaa-----------------~~Gl~~l~~~~P~v~I~t-a~iD~~  184 (208)
T 2e55_A          134 GGTLEVALREILKHSPLKVKSVHAIAA-----------------PEGLKRIEEKFKEVEIFV-GNVDER  184 (208)
T ss_dssp             SHHHHHHHHHHHTTCBSEEEEEEEEEC-----------------HHHHHHHHHHCTTSEEEE-EEECSE
T ss_pred             CCHHHHHHHHHHHCCCCEEEEEEEEEC-----------------HHHHHHHHHHCCCCEEEE-EEECCC
T ss_conf             715999999998448861799999825-----------------999999998788968999-983687


No 177
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=33.16  E-value=24  Score=15.30  Aligned_cols=65  Identities=15%  Similarity=0.156  Sum_probs=32.2

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC--CC---CHHHHHHHHHHHHHC-CCEEEEC
Q ss_conf             88999999999999888936763302563345544542157--65---379999999997301-4479861
Q gi|255764463|r   65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIID--PD---NLINEGICAIKKNIP-NIGIITD  129 (337)
Q Consensus        65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n--~d---glv~rAIr~IK~~fp-dl~vi~D  129 (337)
                      -+.+.+.++++++.+.|.++|-+-.+-+....+.++.....  +.   .--.+.++++++.++ ++.++.|
T Consensus       145 ~~~e~~~~~a~~~~~~Gf~~~Kikvg~~~~~~~~~~~~~~~~~~~~~~~~di~~i~air~~~g~~~~l~~D  215 (403)
T 2ox4_A          145 GRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVE  215 (403)
T ss_dssp             CSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             99999999999988559877985024577555433322346786567999999999999981972002555


No 178
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei}
Probab=32.61  E-value=25  Score=15.24  Aligned_cols=54  Identities=11%  Similarity=0.057  Sum_probs=25.1

Q ss_pred             HHHHHHHHHHCCCCEEEEEEC-----------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf             999999999888936763302-----------563345544542157653799999999973014
Q gi|255764463|r   70 AVEKIKQVADLGIPAIAIFPN-----------IPMDLRNNTGSHIIDPDNLINEGICAIKKNIPN  123 (337)
Q Consensus        70 L~~eie~~~~lGI~av~LFp~-----------I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpd  123 (337)
                      -.+.+..+.+.|.-.|-|...           .-+.-.|+.|-.--|---++...|++||+..|+
T Consensus       163 f~~aA~rA~~AGfDgVEIH~aHGyLl~qFLSp~~N~RtDeYGGs~eNR~Rf~~Eii~~Ir~~~g~  227 (361)
T 3gka_A          163 FRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSA  227 (361)
T ss_dssp             HHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHHCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99999999971932655401367422026648789987778997899999899999999985276


No 179
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2- epimerase; mannac-6-P epimerase, NANE, structural genomics, protein structure initiative; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=32.37  E-value=25  Score=15.22  Aligned_cols=77  Identities=14%  Similarity=-0.030  Sum_probs=48.0

Q ss_pred             CCCHHHHHHHHHHHHHHCCCCEEEE------------CCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf             7211478898888766408987995------------5311458999999962499899993461899999999888978
Q gi|255764463|r  235 DPANVQEAIREASIDIQESADMLLV------------KPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWIN  302 (337)
Q Consensus       235 d~~n~~eA~~e~~~D~~EGAD~lMV------------KPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d  302 (337)
                      ++.+..++.    .-.+.|+|++.+            .+..+-++.+.++++.+.+|+.+   .           -|.-+
T Consensus       125 ~~~t~~~a~----~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~iPvia---~-----------GGI~t  186 (223)
T 1y0e_A          125 DIATVEEAK----NAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIA---E-----------GNVIT  186 (223)
T ss_dssp             ECSSHHHHH----HHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEE---E-----------SSCCS
T ss_pred             CCCCHHHHH----HHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEE---E-----------CCCCC
T ss_conf             879999999----99975999699767788533568876554799999998428997898---6-----------89899


Q ss_pred             HHHHHHHHHHHHHHHCCCEEEECHH----HHHHHHH
Q ss_conf             8999999999997726999982018----9999998
Q gi|255764463|r  303 KNDAMMESLLAFKRAGCDGIFTYFA----MEAARIL  334 (337)
Q Consensus       303 ~~~~~~E~l~~~kRAGAd~IitY~A----~~~a~~L  334 (337)
                      .+++ .+.    ..+|||.++.=-|    .++++|+
T Consensus       187 ~ed~-~~a----l~~GAdgV~vGsAi~~p~~~~~~f  217 (223)
T 1y0e_A          187 PDMY-KRV----MDLGVHCSVVGGAITRPKEITKRF  217 (223)
T ss_dssp             HHHH-HHH----HHTTCSEEEECHHHHCHHHHHHHH
T ss_pred             HHHH-HHH----HHCCCCEEEECHHHCCHHHHHHHH
T ss_conf             9999-999----986999999842117989999999


No 180
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=32.17  E-value=25  Score=15.20  Aligned_cols=68  Identities=16%  Similarity=0.240  Sum_probs=41.2

Q ss_pred             CCCCCCCC-HHHHHHHHHHHHHHCCCCEEEEC---CCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCC
Q ss_conf             44315721-14788988887664089879955---3114589999999624-998999934618999999998889
Q gi|255764463|r  230 KTYYLDPA-NVQEAIREASIDIQESADMLLVK---PGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGW  300 (337)
Q Consensus       230 ~sYQmd~~-n~~eA~~e~~~D~~EGAD~lMVK---Pa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~  300 (337)
                      ..|+...+ |..||+.-..   ++--|++.+-   |+|.=+++++.+|+.. ..|+...--.++...+..|.+.|.
T Consensus        37 ~g~~v~~a~~~~eAl~~l~---~~~~dlvi~D~~mP~~~G~ell~~ir~~~~~~piI~lT~~~~~~~~~~a~~~Ga  109 (153)
T 3hv2_A           37 LPYTLHFARDATQALQLLA---SREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINEGE  109 (153)
T ss_dssp             SSCEEEEESSHHHHHHHHH---HSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTTC
T ss_pred             CCCEEEEECCHHHHHHHHH---HCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC
T ss_conf             7999999899999999987---279999998367889988999999998689996899979999999999997799


No 181
>1eh9_A Glycosyltrehalose trehalohydrolase; alpha/beta barrel, calcium binding, covalent dimer,; 3.00A {Sulfolobus solfataricus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1eha_A
Probab=31.83  E-value=25  Score=15.16  Aligned_cols=171  Identities=19%  Similarity=0.291  Sum_probs=91.1

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCH------------HHHHHHHHHHHHCCCEEEECCCCC
Q ss_conf             89999999999998889367633025633455445421576537------------999999999730144798613327
Q gi|255764463|r   66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNL------------INEGICAIKKNIPNIGIITDVALD  133 (337)
Q Consensus        66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dgl------------v~rAIr~IK~~fpdl~vi~DVcLc  133 (337)
                      ....+.+.+..+.+|||++|-|-|+-+...+..-|   |++-++            ..+-|+++.++  .|-||.||-+-
T Consensus       117 d~~gi~~kLdyl~~LGv~~v~L~Pi~~~~~~~~~G---Y~~~dy~~vd~~~Gt~~dfk~lv~~~H~~--Gi~VilDvV~N  191 (558)
T 1eh9_A          117 TFEGVIRKLDYLKDLGITAIEIMPIAQFPGKRDWG---YDGVYLYAVQNSYGGPEGFRKLVDEAHKK--GLGVILDVVYN  191 (558)
T ss_dssp             SHHHHHHTHHHHHHHTCCEEEECCCBCCSSSCCCS---TTCCCTTCBCSTTCCHHHHHHHHHHHHHT--TCEEEEEECCS
T ss_pred             CHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEEEECCC
T ss_conf             98899987589997599879962304447767778---75210121024579999999999999764--98899863345


Q ss_pred             HHHCC----------------CCCCCC-CCCCCCHHHHHHHHHHHHHHHH-HCCCCEE---ECCCC----CCCHHHHHHH
Q ss_conf             10011----------------431001-3654462899999999999999-6289735---24667----6779999999
Q gi|255764463|r  134 PFTIH----------------GHDGIL-CDGEIVNDETIELISHAAVIQA-DAGADII---APSEM----MDGRVQEIRK  188 (337)
Q Consensus       134 ~YT~h----------------GHcGi~-~~g~IdND~Tl~~L~k~Al~~A-~AGaDiv---APSdM----MDGrV~aIR~  188 (337)
                      .-...                ..++.. ....-.|++..+.+.+...-.. +-|+|-.   +...|    ...-...+++
T Consensus       192 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~v~~~i~d~~~~Wl~e~gVDGfR~D~~~~l~~~~~~~~~~~~~~  271 (558)
T 1eh9_A          192 HVGPEGNYMVKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWIKEYNVDGFRLDAVHAIIDTSPKHILEEIAD  271 (558)
T ss_dssp             CCCSSSCCHHHHSCCSCSSCCCSSSCCCCSSSTTHHHHHHHHHHHHHHHHHHSCCCCEEETTGGGCCCCSSSCHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCHHHHHHHHHH
T ss_conf             55578853113698533356776567668887689999999999999999861897799834676134430565899899


Q ss_pred             HHHHCCCC--------CCCEECHH----HHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             99877885--------77300336----664354301016753102446777744315721147889
Q gi|255764463|r  189 KLDSHGHI--------NVGIMPYV----AKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAI  243 (337)
Q Consensus       189 ~Ld~~g~~--------~~~ImsYs----aKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~  243 (337)
                      .+.+.+..        +..+....    ..+.+.+...||+++...  +.+++.....+..+...-.
T Consensus       272 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  336 (558)
T 1eh9_A          272 VVHKYNRIVIAESDLNDPRVVNPKEKCGYNIDAQWVDDFHHSIHAY--LTGERQGYYTDFGNLDDIV  336 (558)
T ss_dssp             HHHHTTCCEEECCCSCCTTTTSCGGGTCCCCSEEECHHHHHHHHHH--HSCCCSGGGGGCCSHHHHH
T ss_pred             HHHHCCCCCEECCCCCCCCEECCCCCCCCEEEEECCCCHHHHHHHH--HCCCCCCCHHCCHHHHHHH
T ss_conf             9873384000001147763442232477223322053078899998--5454222010101157888


No 182
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=31.77  E-value=18  Score=16.10  Aligned_cols=68  Identities=10%  Similarity=0.037  Sum_probs=34.0

Q ss_pred             CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf             89881104888786328899999999999988893676330256334554454215765379999999997301447986
Q gi|255764463|r   49 GEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIIT  128 (337)
Q Consensus        49 g~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~  128 (337)
                      |...++.++.--+.+.-+.+.+.+++++..+.|.+.+-+=.+.+.. .            -..+..+.+++.+||+.++.
T Consensus       129 Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~KiK~g~~~~-~------------~~~~~~~~~~~~g~d~~l~v  195 (371)
T 2ps2_A          129 GGRTNTRLPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISGEPV-T------------DAKRITAALANQQPDEFFIV  195 (371)
T ss_dssp             TCCCSSCEEBEEEECSCCHHHHHHHHHHHHTTTCCEEEEECCSCHH-H------------HHHHHHHHTTTCCTTCEEEE
T ss_pred             CCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCH-H------------HHHHHHHHHHHHCCCCEEEE
T ss_conf             7764432210112368999999999999875167520135788746-8------------89998999998488852620


Q ss_pred             C
Q ss_conf             1
Q gi|255764463|r  129 D  129 (337)
Q Consensus       129 D  129 (337)
                      |
T Consensus       196 D  196 (371)
T 2ps2_A          196 D  196 (371)
T ss_dssp             E
T ss_pred             C
T ss_conf             4


No 183
>2ehj_A Uracil phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Escherichia coli}
Probab=31.57  E-value=26  Score=15.13  Aligned_cols=49  Identities=22%  Similarity=0.445  Sum_probs=35.4

Q ss_pred             HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCH
Q ss_conf             9999999999988893676330256334554454215765379999999997301447986133271
Q gi|255764463|r   68 DVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDP  134 (337)
Q Consensus        68 d~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~  134 (337)
                      .++...++.+.+.|++.|.+.-.+..                 +..|+.+.+.||++-|+|= |+|+
T Consensus       137 ~s~~~ai~~L~~~G~~~I~iv~~ias-----------------~~Gi~~l~~~~P~v~I~ta-~iD~  185 (208)
T 2ehj_A          137 GSVIATIDLLKKAGCSSIKVLVLVAA-----------------PEGIAALEKAHPDVELYTA-SIDQ  185 (208)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEEEEEC-----------------HHHHHHHHHHCTTSEEEES-CBCS
T ss_pred             HHHHHHHHHHHHCCCCCEEEEEEEEC-----------------HHHHHHHHHHCCCCEEEEE-EECC
T ss_conf             77999999998579982899999855-----------------8999999987949789999-8668


No 184
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=31.40  E-value=26  Score=15.11  Aligned_cols=170  Identities=14%  Similarity=0.097  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEEC-----------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHH
Q ss_conf             999999999999888936763302-----------563345544542157653799999999973014479861332710
Q gi|255764463|r   67 IDVAVEKIKQVADLGIPAIAIFPN-----------IPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPF  135 (337)
Q Consensus        67 id~L~~eie~~~~lGI~av~LFp~-----------I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~Y  135 (337)
                      ++...+.++.+.+.|.-.|-|-..           .-++..|+.|-.--|.--++...|++||+..|+-.|+.=  +-+.
T Consensus       166 i~~f~~AA~rA~~AGfDgVEIH~aHGyLl~qFlSp~~N~RtD~YGGs~eNR~Rf~lEii~aIr~~vg~~~i~~r--~~~~  243 (376)
T 1icp_A          166 VNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIR--ISPF  243 (376)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEE--ECTT
T ss_pred             HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE--ECCH
T ss_conf             99999999999981999699711303289871376579986888887899879899999999986088655788--5151


Q ss_pred             HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCH
Q ss_conf             01143100136544628999999999999996289735246676779999999998778857730033666435430101
Q gi|255764463|r  136 TIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPY  215 (337)
Q Consensus       136 T~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPF  215 (337)
                      ....+.     + ...+....+  ......+..|.+.+--|......-           +.....+        .+..++
T Consensus       244 ~~~~~g-----g-~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~-----------~~~~~~~--------~~~~~i  296 (376)
T 1icp_A          244 AHYNEA-----G-DTNPTALGL--YMVESLNKYDLAYCHVVEPRMKTA-----------WEKIECT--------ESLVPM  296 (376)
T ss_dssp             CCTTTC-----C-CSCHHHHHH--HHHHHHGGGCCSEEEEECCSCCC-----------------CC--------CCSHHH
T ss_pred             HHCCCC-----C-CCCHHHHHH--HHHHHHHHCCEEEEEEECCCCCCC-----------CCCCCCH--------HHHHHH
T ss_conf             012478-----8-852789999--999986410234566634765445-----------5555447--------889999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCEEEE-CCCHHHHHHHHHHHHHCC
Q ss_conf             67531024467777443157211478898888766408-987995-531145899999996249
Q gi|255764463|r  216 RDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQES-ADMLLV-KPGLPYLDVCFRIKEKFG  277 (337)
Q Consensus       216 RdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EG-AD~lMV-KPa~~yLDii~~~k~~~~  277 (337)
                      |.+++......|.     +++.   +    ++.-+.|| ||++++ .|.+.-=|.++++++...
T Consensus       297 ~~~~~~pvi~~G~-----~~~~---~----ae~~l~~g~aDlV~~gR~~laDP~~~~K~~~g~~  348 (376)
T 1icp_A          297 RKAYKGTFIVAGG-----YDRE---D----GNRALIEDRADLVAYGRLFISNPDLPKRFELNAP  348 (376)
T ss_dssp             HHHCCSCEEEESS-----CCHH---H----HHHHHHTTSCSEEEESHHHHHCTTHHHHHHHTCC
T ss_pred             HHHCCCCEEEECC-----CCHH---H----HHHHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCC
T ss_conf             9863787799789-----8999---9----9999987997753753999979309999974999


No 185
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, lyase; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=31.29  E-value=26  Score=15.10  Aligned_cols=67  Identities=12%  Similarity=0.238  Sum_probs=43.6

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCH
Q ss_conf             4888786328899999999999988893676330256334554454215765379999999997301-447986133271
Q gi|255764463|r   56 INSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDP  134 (337)
Q Consensus        56 I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~  134 (337)
                      ..+.-+....+.|.+.++++...+.|.+.+-+-.+.. ..++            -.+.++.+++.++ ++.++.|. -+.
T Consensus       165 ~~~~~~~~~~~~d~~~~~~~~~~~~Gf~~~K~k~~~~-~~~~------------d~~~v~~ir~~~G~~~~l~vDa-N~~  230 (398)
T 2pp0_A          165 YNTSGGFLHTPLDQVLKNVVISRENGIGGIKLKVGQP-NCAE------------DIRRLTAVREALGDEFPLMVDA-NQQ  230 (398)
T ss_dssp             EECTTSCTTSCHHHHHHHHHHHHHTTCSCEEEECCCS-CHHH------------HHHHHHHHHHHHCSSSCEEEEC-TTC
T ss_pred             EEECCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCC-CHHH------------HHHHHHHHHHHHCCCCEEEEEC-CCC
T ss_conf             3531566789899998888999974987000145789-9899------------9999999999849997499745-555


Q ss_pred             HH
Q ss_conf             00
Q gi|255764463|r  135 FT  136 (337)
Q Consensus       135 YT  136 (337)
                      ||
T Consensus       231 ~~  232 (398)
T 2pp0_A          231 WD  232 (398)
T ss_dssp             SC
T ss_pred             CC
T ss_conf             49


No 186
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=31.27  E-value=26  Score=15.10  Aligned_cols=151  Identities=13%  Similarity=0.100  Sum_probs=74.3

Q ss_pred             CCCCEEEE---CCCCCEEECCCCCCCCCC--CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC---CCCC--------C
Q ss_conf             33116667---589881104888786328--899999999999988893676330256334554---4542--------1
Q gi|255764463|r   40 LILPIFLT---SGEKTVESINSMPDVMRM--SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNN---TGSH--------I  103 (337)
Q Consensus        40 LI~PiFV~---eg~~~k~~I~SMPGv~R~--Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~---~Gse--------A  103 (337)
                      .||=|||.   +|.....+-........+  .+..+.+.+..+.++||++|-|-|..+....+.   .+.+        +
T Consensus        10 ~iY~i~~~~F~~~~~~~~~~~~~~~~~~~gGd~~gi~~kLdyl~~LGv~~I~l~Pi~~~~~~~~~~~~~~~gY~~~dy~~   89 (478)
T 2guy_A           10 SIYFLLTDRFARTDGSTTATCNTADQKYCGGTWQGIIDKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYS   89 (478)
T ss_dssp             CEEEECHHHHCBTTCCSSCCCCGGGTCCCCBCHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEE
T ss_pred             CEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             69999851212799987767776667647838999998469998789988995997678765577888888837656777


Q ss_pred             CCCC-CHHHHHHHHHHHHH-C-CCEEEECCCCCHHHC---------------------CCCCCC-------------CC-
Q ss_conf             5765-37999999999730-1-447986133271001---------------------143100-------------13-
Q gi|255764463|r  104 IDPD-NLINEGICAIKKNI-P-NIGIITDVALDPFTI---------------------HGHDGI-------------LC-  145 (337)
Q Consensus       104 ~n~d-glv~rAIr~IK~~f-p-dl~vi~DVcLc~YT~---------------------hGHcGi-------------~~-  145 (337)
                      .++. |=. .-.+.+-++. - .|.||.|+-+-.-..                     |..+.+             .. 
T Consensus        90 id~~~Gt~-~dfk~lv~~~H~~Gi~VilD~V~NH~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (478)
T 2guy_A           90 LNENYGTA-DDLKALSSALHERGMYLMVDVVANHMGYDGAGSSVDYSVFKPFSSQDYFHPFCFIQNYEDQTQVEDCWLGD  168 (478)
T ss_dssp             ECTTSCCH-HHHHHHHHHHHHTTCEEEEEECCSBCCEEBCGGGCCGGGSBSCCSGGGBCCSCBCCCTTCHHHHHHSBEEC
T ss_pred             CCCCCCCH-HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             48354999-99999999986668889997045666655566433221124567544468754434556765333321467


Q ss_pred             ------CCCCCHHHHHHHHHHHHHHHH-HCCCCEEE---CCCCCCCHHHHHHHHHH
Q ss_conf             ------654462899999999999999-62897352---46676779999999998
Q gi|255764463|r  146 ------DGEIVNDETIELISHAAVIQA-DAGADIIA---PSEMMDGRVQEIRKKLD  191 (337)
Q Consensus       146 ------~g~IdND~Tl~~L~k~Al~~A-~AGaDivA---PSdMMDGrV~aIR~~Ld  191 (337)
                            +=.-.|.+..+.+.+...... +.|+|.+-   ...|-..-...+++..+
T Consensus       169 ~~~~~pdln~~~~~v~~~~~~~~~~w~~~~giDGfR~D~~~~~~~~f~~~~~~~~~  224 (478)
T 2guy_A          169 NTVSLPDLDTTKDVVKNEWYDWVGSLVSNYSIDGLRIDTVKHVQKDFWPGYNKAAG  224 (478)
T ss_dssp             SSEEECBBCTTSHHHHHHHHHHHHHHHHHHTCCEEEETTGGGSCGGGHHHHHHHHT
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf             76767520238789999999888742221344147971102276889987553564


No 187
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes}
Probab=30.86  E-value=26  Score=15.05  Aligned_cols=62  Identities=11%  Similarity=0.091  Sum_probs=40.8

Q ss_pred             CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHCCCEEEECCC
Q ss_conf             2889999999999998889367633025633455445421576537-9999999997301447986133
Q gi|255764463|r   64 RMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNL-INEGICAIKKNIPNIGIITDVA  131 (337)
Q Consensus        64 R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dgl-v~rAIr~IK~~fpdl~vi~DVc  131 (337)
                      -.|.+.+.+.++.+.++|++  ++|+++- +..+.-  .+|.--|+ =.+-++.+|++| .+-++|||.
T Consensus       152 iEs~e~~~~~A~~lk~~~~~--~~r~~~f-k~RTs~--~sf~G~G~egL~il~~i~~~~-Glpv~Tev~  214 (385)
T 3nvt_A          152 VESYEQVAAVAESIKAKGLK--LIRGGAF-KPRTSP--YDFQGLGLEGLKILKRVSDEY-GLGVISEIV  214 (385)
T ss_dssp             CCCHHHHHHHHHHHHHTTCC--EEECBSS-CCCSST--TSCCCCTHHHHHHHHHHHHHH-TCEEEEECC
T ss_pred             CCCHHHHHHHHHHHHHCCCC--EEECCEE-CCCCCC--CCCCCCCHHHHHHHHHHHHHC-CCCEEEEEH
T ss_conf             38999999999999866971--8974414-689998--675786589999999999864-997466311


No 188
>3n4f_A Mandelate racemase/muconate lactonizing protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MSE; 1.88A {Geobacillus SP}
Probab=30.78  E-value=24  Score=15.29  Aligned_cols=68  Identities=13%  Similarity=-0.015  Sum_probs=41.1

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEECCCCCHHHCC
Q ss_conf             889999999999998889367633025633455445421576537999999999730-14479861332710011
Q gi|255764463|r   65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI-PNIGIITDVALDPFTIH  138 (337)
Q Consensus        65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f-pdl~vi~DVcLc~YT~h  138 (337)
                      -+++.+.+++++..+.|.++|-+=.+.+.. ... ..+....   --..++++++.+ |++.++.| |-+.||..
T Consensus       147 ~~~~~~~~~a~~~~~~Gf~~~KiKvG~~~~-~~~-~~~~~~~---Di~~v~avR~~~G~~~~l~vD-aN~~wt~~  215 (392)
T 3n4f_A          147 AAVALMQEEAMQGYAKGQRHFKIKVGRGGR-HMP-LWEGTKR---DIAIVRGISEVAGPAGKIMID-ANNAYNLN  215 (392)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCEEEECCHHHH-TSC-HHHHHHH---HHHHHHHHHHHHCTTCCEEEE-CTTCCCHH
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEECCCCCCC-CCC-CCCCHHH---HHHHHHHHHHHHCCCEEEEEE-CCCCCCHH
T ss_conf             339999999999997699778860357876-665-4238999---999999999975898189997-47553457


No 189
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleotide and nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=30.65  E-value=27  Score=15.03  Aligned_cols=53  Identities=15%  Similarity=0.207  Sum_probs=24.7

Q ss_pred             CCCHHHCCCCEEEECCCCCEE--------ECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf             788877331166675898811--------04888786328899999999999988893676
Q gi|255764463|r   34 RLSVSDLILPIFLTSGEKTVE--------SINSMPDVMRMSIDVAVEKIKQVADLGIPAIA   86 (337)
Q Consensus        34 ~Ls~~dLI~PiFV~eg~~~k~--------~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~   86 (337)
                      .+....|=.||+-..=..+-+        .-..+.=+.|+..+..++++.+....++...+
T Consensus        39 ~~~~~~~~iPIisSnMDtV~~~~mA~~l~~~Gglgvlhr~~~e~~~~~v~~~k~~~l~~~~   99 (336)
T 1ypf_A           39 TLGKHKFKLPVVPANMQTIIDERIATYLAENNYFYIMHRFQPEKRISFIRDMQSRGLIASI   99 (336)
T ss_dssp             EETTEEESSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGGGHHHHHHHHHHTTCCCEE
T ss_pred             EECCCCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEEEE
T ss_conf             9579505787897899873889999999967982687145828888787752126648999


No 190
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiative, PSI-2; 2.81A {Galdieria sulphuraria}
Probab=30.55  E-value=27  Score=15.02  Aligned_cols=132  Identities=9%  Similarity=-0.009  Sum_probs=72.1

Q ss_pred             CCCCHHHHHHHHHHHCCCC-CCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
Q ss_conf             7677999999999877885-773003366643543010167531024467777443157211478898888766408987
Q gi|255764463|r  178 MMDGRVQEIRKKLDSHGHI-NVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADM  256 (337)
Q Consensus       178 MMDGrV~aIR~~Ld~~g~~-~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~  256 (337)
                      --.+-+..+.+.+.+.+.. .+-+.|++-.....    ||......|....-......++.+   .+...   ...|++.
T Consensus       123 ~~~~~~~~v~~~i~~~~~~~rv~~~Sf~~~~l~~----~~~~~p~~~~~~l~~~~~~~~~~~---~~~~~---~~~~~~~  192 (258)
T 2o55_A          123 KESGDHQRLLLLVEKYHMQERVDYCSFHHEALAH----LKALCPDVKITYLFNYMGQPTPLD---FVEQA---CYGDANG  192 (258)
T ss_dssp             TTSSHHHHHHHHHHTTTCGGGEEEEESSHHHHHH----HHHHCTTCEEEEECCTTSCCCCTT---HHHHH---HHTTCSE
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH----HHHHCCCCEEEEEECCCCCCCHHH---HHHHH---HHCCCCE
T ss_conf             1027899999999971742257656699999999----998789971999960466678677---99998---8526747


Q ss_pred             EEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHC
Q ss_conf             99553114589999999624998999934618999999998889788999999999997726999982018999999850
Q gi|255764463|r  257 LLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAARILTH  336 (337)
Q Consensus       257 lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~~L~~  336 (337)
                      +-+.-...--+.|..+++ .++|+.+|-|..            ..|.+..+    .-+.+.|.|.|+|=+-..+.++|++
T Consensus       193 i~~~~~~l~~~~v~~~~~-~Gl~v~vwTv~~------------~~n~~~~~----~~l~~~GVdgI~TD~P~~~~~~l~~  255 (258)
T 2o55_A          193 VSMLFHYLTKEQVCTAHE-KGLSVTVWMPWI------------FDDSEEDW----KKCLELQVDLICSNYPFGLMNFLSN  255 (258)
T ss_dssp             EEEEGGGCCHHHHHHHHH-TTCEEEEECCTT------------CCCCHHHH----HHHHHHTCSEEEESCHHHHHHHHTC
T ss_pred             EECCCCCCCHHHHHHHHH-CCCEEEEEECCC------------CCCCHHHH----HHHHHCCCCEEEECCHHHHHHHHHH
T ss_conf             741331189999999998-699899994778------------89859999----9999689999997989999999986


No 191
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomics, NPPSFA; 2.30A {Methanocaldococcus jannaschii DSM2661}
Probab=30.52  E-value=26  Score=15.05  Aligned_cols=36  Identities=25%  Similarity=0.162  Sum_probs=27.4

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf             677774431572114788988887664089879955
Q gi|255764463|r  225 LKGDKKTYYLDPANVQEAIREASIDIQESADMLLVK  260 (337)
Q Consensus       225 ~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVK  260 (337)
                      +.-||+.|..|+-+.---+-|+.+-|.|||-|+=-|
T Consensus       113 ~HI~K~~F~vPFVCGarnLGEALRRI~EGAaMIRTK  148 (330)
T 2yzr_A          113 FHIYKKKFNVPFVCGARNLGEAVRRIWEGAAMIRTK  148 (330)
T ss_dssp             CCCCGGGCSSCEEEECSSHHHHHHHHHHTCSEEEEC
T ss_pred             CCCCCCCCCCCEECCCCCHHHHHHHHHCCHHHCCCC
T ss_conf             213330477764337897089999886002111367


No 192
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.70A {Burkholderia xenovorans LB400} PDB: 2oo6_A
Probab=30.17  E-value=27  Score=14.98  Aligned_cols=74  Identities=15%  Similarity=0.088  Sum_probs=47.6

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC--------------C--HHHHHHHHHHHHH-
Q ss_conf             8786328899999999999988893676330256334554454215765--------------3--7999999999730-
Q gi|255764463|r   59 MPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPD--------------N--LINEGICAIKKNI-  121 (337)
Q Consensus        59 MPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~d--------------g--lv~rAIr~IK~~f-  121 (337)
                      +-+...-+.+.+.++++++.+.|-+++-+=.+.+.. .+   ...|.++              .  -..+.|+++++.+ 
T Consensus       136 ~~~~~~~~~d~~~~~~~~~~~~Gf~~~K~kvg~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~air~~~G  211 (409)
T 3go2_A          136 FFGPPVTDLDGVKRTAEEARERQFRAIKTNIFIHDD-GP---LHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAG  211 (409)
T ss_dssp             TSSSCCCSHHHHHHHHHHHHHTTCCEEEECCEECSS-SS---CEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHC
T ss_pred             HCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCC-CC---CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf             116766677999999999997698768776223467-64---10145544567776443238999999999999999719


Q ss_pred             CCCEEEECCCCCHHHC
Q ss_conf             1447986133271001
Q gi|255764463|r  122 PNIGIITDVALDPFTI  137 (337)
Q Consensus       122 pdl~vi~DVcLc~YT~  137 (337)
                      ||+.++.|. -+.||.
T Consensus       212 ~d~~l~vDa-N~~~~~  226 (409)
T 3go2_A          212 PDVEILLDL-NFNAKP  226 (409)
T ss_dssp             TTSEEEEEC-TTCSCH
T ss_pred             CCCCEEECC-CCCCCH
T ss_conf             986267516-776547


No 193
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 2.71A {Bacillus subtilis subsp}
Probab=30.14  E-value=27  Score=14.97  Aligned_cols=27  Identities=22%  Similarity=0.334  Sum_probs=20.7

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             7863288999999999999888936763
Q gi|255764463|r   60 PDVMRMSIDVAVEKIKQVADLGIPAIAI   87 (337)
Q Consensus        60 PGv~R~Sid~L~~eie~~~~lGI~av~L   87 (337)
                      ||. ++|.+.-+..++.+.++|+..|=+
T Consensus        21 ~~~-~~s~~~k~~i~~~L~~~Gv~~IEv   47 (307)
T 1ydo_A           21 EPV-WIATEDKITWINQLSRTGLSYIEI   47 (307)
T ss_dssp             SSS-CCCHHHHHHHHHHHHTTTCSEEEE
T ss_pred             CCC-CCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf             899-889999999999999819998995


No 194
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=29.75  E-value=27  Score=14.93  Aligned_cols=71  Identities=14%  Similarity=-0.006  Sum_probs=42.1

Q ss_pred             CCCCC-CHHHHHHHHHHHHH----HCCCCEEEEC---CCHHHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHHHHCCC
Q ss_conf             31572-11478898888766----4089879955---3114589999999624---998999934618999999998889
Q gi|255764463|r  232 YYLDP-ANVQEAIREASIDI----QESADMLLVK---PGLPYLDVCFRIKEKF---GLPTFAYQVSGEYAMIKAASLQGW  300 (337)
Q Consensus       232 YQmd~-~n~~eA~~e~~~D~----~EGAD~lMVK---Pa~~yLDii~~~k~~~---~~P~~aYqVSGEYami~~a~~~g~  300 (337)
                      ||... .|..||+.......    .+--|++++-   |+|.=+++++.+|+..   .+|+...-.+++-.-...|-+.|.
T Consensus        35 ~~v~~~~~g~eAl~~l~~~~~~~~~~~pdlillD~~mP~~~G~el~~~ir~~~~~~~iPvI~lT~~~~~~~~~~a~~~Ga  114 (149)
T 1i3c_A           35 HELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHV  114 (149)
T ss_dssp             EEEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTC
T ss_pred             CEEEEECCHHHHHHHHHHCCHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCC
T ss_conf             47999899999999998500221268988899848999986499999998580447998899956899999999998799


Q ss_pred             CC
Q ss_conf             78
Q gi|255764463|r  301 IN  302 (337)
Q Consensus       301 ~d  302 (337)
                      -+
T Consensus       115 ~~  116 (149)
T 1i3c_A          115 NC  116 (149)
T ss_dssp             SE
T ss_pred             CE
T ss_conf             89


No 195
>1ad1_A DHPS, dihydropteroate synthetase; transferase, APO form, complex with OH-CH2-pterin-pyrophosphate; 2.20A {Staphylococcus aureus} SCOP: c.1.21.1 PDB: 1ad4_A*
Probab=29.74  E-value=27  Score=14.93  Aligned_cols=206  Identities=16%  Similarity=0.213  Sum_probs=96.6

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH---HHHHHHHHHCCCEEEECCCCCHHHCCCCC
Q ss_conf             889999999999998889367633025633455445421576537999---99999973014479861332710011431
Q gi|255764463|r   65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINE---GICAIKKNIPNIGIITDVALDPFTIHGHD  141 (337)
Q Consensus        65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~r---AIr~IK~~fpdl~vi~DVcLc~YT~hGHc  141 (337)
                      ++.+.+++.+++..+.|..-|=+ |+  ++  +--|+.-..++-=..|   .++.+++.  ++.    +-+|.|..    
T Consensus        23 ~~~~~a~~~~~~~i~~GAdiIDI-Ga--eS--TrPga~~i~~eeE~~Rl~pvl~~i~~~--~~~----iSIDT~~~----   87 (266)
T 1ad1_A           23 NNVESAVTRVKAMMDEGADIIDV-GG--VS--TRPGHEMITVEEELNRVLPVVEAIVGF--DVK----ISVDTFRS----   87 (266)
T ss_dssp             CSHHHHHHHHHHHHHTTCSEEEE-ES--CC--CSTTCCCCCHHHHHHHHHHHHHHHTTS--SSE----EEEECSCH----
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEE-CC--CC--CCCCCCCCCHHHHHHHHHHHHHHHHCC--CCC----EEEEECCH----
T ss_conf             89999999999999879989997-98--61--899998669999998840245554136--862----44601889----


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEC-C-CCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHH
Q ss_conf             0013654462899999999999999628973524-6-6767799999999987788577300336664354301016753
Q gi|255764463|r  142 GILCDGEIVNDETIELISHAAVIQADAGADIIAP-S-EMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAI  219 (337)
Q Consensus       142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAP-S-dMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~  219 (337)
                                     ..++.|   .++|+|||== | ...|.....+   .-+.+. .+.+|- +-              
T Consensus        88 ---------------eVa~~a---l~~G~~iINDVsgg~~D~~m~~~---va~~~~-~~ilmH-~~--------------  130 (266)
T 1ad1_A           88 ---------------EVAEAC---LKLGVDIINDQWAGLYDHRMFQV---VAKYDA-EIVLMH-NG--------------  130 (266)
T ss_dssp             ---------------HHHHHH---HHTTCCEEEETTTTSSCTHHHHH---HHHTTC-EEEEEC-CC--------------
T ss_pred             ---------------HHHHHH---HHCCCCEEEECCCCCCCCHHHHH---HHHCCC-CEEEEE-CC--------------
T ss_conf             ---------------999999---98799199950346667028999---971499-868720-78--------------


Q ss_pred             HCCCCCCCCCCCCCCCC-CHHHHH-HHHHHHHHHCCC--CEEEECCCH-------HHHHHHHHHHHH--CCCCEEEEECC
Q ss_conf             10244677774431572-114788-988887664089--879955311-------458999999962--49989999346
Q gi|255764463|r  220 STRDLLKGDKKTYYLDP-ANVQEA-IREASIDIQESA--DMLLVKPGL-------PYLDVCFRIKEK--FGLPTFAYQVS  286 (337)
Q Consensus       220 ~S~p~~~gdr~sYQmd~-~n~~eA-~~e~~~D~~EGA--D~lMVKPa~-------~yLDii~~~k~~--~~~P~~aYqVS  286 (337)
                       ..|        ..+|+ ....+- ......-...|-  +-+++-||+       ..+.+++.++.-  ++.|+.+ -+|
T Consensus       131 -~~~--------~~~~~~~~v~~~~~~~~~~~~~~Gi~~~~IilDPGiGFgKt~~~n~~ll~~l~~~~~~~~PiLv-G~S  200 (266)
T 1ad1_A          131 -NGN--------RDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDELVATEYPVLL-ATS  200 (266)
T ss_dssp             -CTT--------CCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHCHHHHHTTCSCBEE-CCT
T ss_pred             -CCC--------CCCCCHHHHHHHHHHHHHHHHHCCCCHHCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE-EEC
T ss_conf             -665--------5431000133578999999997598631388647636676721049999979997247986799-624


Q ss_pred             HHHHHHHHHHHCCC--CCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHH
Q ss_conf             18999999998889--788999999999997726999982018999999
Q gi|255764463|r  287 GEYAMIKAASLQGW--INKNDAMMESLLAFKRAGCDGIFTYFAMEAARI  333 (337)
Q Consensus       287 GEYami~~a~~~g~--~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~~  333 (337)
                      =- +||........  .+...+.+-+...-...||++|=+==.++..+.
T Consensus       201 RK-sfi~~l~g~~~~~~~r~~~tla~~~~a~~~Ga~iiRvHDV~~~~~~  248 (266)
T 1ad1_A          201 RK-RFTKEMMGYDTTPVERDEVTAATTAYGIMKGVRAVRVHNVELNAKL  248 (266)
T ss_dssp             TS-HHHHTTSSSCCCGGGGHHHHHHHHHHHHHHTCCEEEESCHHHHHHH
T ss_pred             HH-HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH
T ss_conf             78-8999975689987874289999999999879999994997999999


No 196
>2e1d_A Transaldolase; pentose phosphate pathway, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.00A {Mus musculus} SCOP: c.1.10.1 PDB: 2cwn_A 1f05_A
Probab=29.68  E-value=28  Score=14.92  Aligned_cols=147  Identities=20%  Similarity=0.184  Sum_probs=65.4

Q ss_pred             CCCCCCCHHHHHHHHHHH----HH--CCCEEEECCCCCHHHCCCCCCC--CC-CCCCCHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf             215765379999999997----30--1447986133271001143100--13-654462899999999999999628973
Q gi|255764463|r  102 HIIDPDNLINEGICAIKK----NI--PNIGIITDVALDPFTIHGHDGI--LC-DGEIVNDETIELISHAAVIQADAGADI  172 (337)
Q Consensus       102 eA~n~dglv~rAIr~IK~----~f--pdl~vi~DVcLc~YT~hGHcGi--~~-~g~IdND~Tl~~L~k~Al~~A~AGaDi  172 (337)
                      -++|-++.+-+|.|.++-    ..  |+++|=.     |-|.-|---+  +. ..-|.--.|+--=..||+.-|+|||.+
T Consensus       108 la~dt~~~i~~A~~l~~~~~~~~i~~~~v~IKI-----PaT~eGi~A~~~L~~~~GI~vN~TLiFS~~Qa~aaa~Aga~~  182 (331)
T 2e1d_A          108 LSFDKDAMVARARRLIELYKEAGVGKDRILIKL-----SSTWEGIQAGKELEEQHGIHCNMTLLFSFAQAVACAEAGVTL  182 (331)
T ss_dssp             GTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEE-----ECSHHHHHHHHHHHHHHCCCEEEEEECSHHHHHHHHHHTCSE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEC-----CCCHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHCCCEE
T ss_conf             015999999999999999886288876468827-----998789999999999459714478872488779999669759


Q ss_pred             EECCCCCCCHHHHHHH-HHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             5246676779999999-998778857730033666435430101675310244677774431572114788988887664
Q gi|255764463|r  173 IAPSEMMDGRVQEIRK-KLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQ  251 (337)
Q Consensus       173 vAPSdMMDGrV~aIR~-~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~  251 (337)
                      |+|   .=|||-..-. .++.+.+..-+.  =........|.-|+.---++ ...+      -.++|..+...      .
T Consensus       183 iSp---fVgRidd~~~~~~~~~~~~~~g~--~Gi~~~~~i~~~~~~~~~~T-~v~~------AS~r~~~~v~~------l  244 (331)
T 2e1d_A          183 ISP---FVGRILDWHVANTDKKSYEPQGD--PGVKSVTKIYNYYKKFGYKT-IVMG------ASFRNTGEIKA------L  244 (331)
T ss_dssp             EEE---BSHHHHHHHHHHSSCCCCCGGGC--HHHHHHHHHHHHHHHTTCCC-EEEE------BCCSSHHHHHT------T
T ss_pred             EEE---ECCCCHHHHHCCCCCCCCCCCCC--CHHHHHHHHHHHHHHCCCCE-EEEE------CCCCCHHHHHH------H
T ss_conf             986---22430234430354322465677--07999999999999819663-8831------57698999999------6


Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHHC
Q ss_conf             0898799553114589999999624
Q gi|255764463|r  252 ESADMLLVKPGLPYLDVCFRIKEKF  276 (337)
Q Consensus       252 EGAD~lMVKPa~~yLDii~~~k~~~  276 (337)
                      -|+|.+-+-|     +++.++.+..
T Consensus       245 aG~d~vTi~p-----~~l~~l~~~~  264 (331)
T 2e1d_A          245 AGCDFLTISP-----KLLGELLKDN  264 (331)
T ss_dssp             TTSSEEEECH-----HHHHHHHHCC
T ss_pred             CCCCEEECCH-----HHHHHHHHCC
T ss_conf             3899897699-----9999998668


No 197
>3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A*
Probab=29.50  E-value=28  Score=14.90  Aligned_cols=15  Identities=13%  Similarity=0.073  Sum_probs=8.7

Q ss_pred             HHHHHCCCCEEEEEE
Q ss_conf             999988893676330
Q gi|255764463|r   75 KQVADLGIPAIAIFP   89 (337)
Q Consensus        75 e~~~~lGI~av~LFp   89 (337)
                      +.++..|...|--++
T Consensus       102 q~l~~~g~~rVf~I~  116 (345)
T 3a5y_A          102 KRLLVAGCGPVFQLC  116 (345)
T ss_dssp             HHHHHTTCCSEEEEE
T ss_pred             HHHHHCCCCCCEEEE
T ss_conf             999967998727983


No 198
>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A
Probab=29.44  E-value=18  Score=16.18  Aligned_cols=14  Identities=36%  Similarity=0.275  Sum_probs=7.0

Q ss_pred             HHHHHHHHHCCCEE
Q ss_conf             99999973014479
Q gi|255764463|r  113 GICAIKKNIPNIGI  126 (337)
Q Consensus       113 AIr~IK~~fpdl~v  126 (337)
                      .++.||+..|++-|
T Consensus        62 ll~~ir~~~p~~pV   75 (368)
T 3dzd_A           62 FIDFIKENSPDSVV   75 (368)
T ss_dssp             HHHHHHHHCTTCEE
T ss_pred             HHHHHHHCCCCCCC
T ss_conf             99999963998754


No 199
>3ju2_A Uncharacterized protein SMC04130; structural genomics, PSI-2, TIM barrel protein, protein structure initiative, Zn binding domain; 1.80A {Sinorhizobium meliloti}
Probab=29.38  E-value=14  Score=16.83  Aligned_cols=20  Identities=30%  Similarity=0.330  Sum_probs=12.8

Q ss_pred             HHHHHHHHHHCCCCEEEEEE
Q ss_conf             99999999988893676330
Q gi|255764463|r   70 AVEKIKQVADLGIPAIAIFP   89 (337)
Q Consensus        70 L~~eie~~~~lGI~av~LFp   89 (337)
                      +.+.++.+.+.|+.+|-|++
T Consensus        21 l~e~l~~~a~~G~~~IEl~~   40 (284)
T 3ju2_A           21 FAEAVDICLKHGITAIAPWR   40 (284)
T ss_dssp             HHHHHHHHHHTTCCEEECBH
T ss_pred             HHHHHHHHHHHCCCEEEECC
T ss_conf             99999999981999899777


No 200
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=29.20  E-value=28  Score=14.87  Aligned_cols=180  Identities=15%  Similarity=0.065  Sum_probs=97.3

Q ss_pred             CCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCC---CCCC------CC--------CHHHHHHHHHHHHHHHHHC
Q ss_conf             65379999999997301447986133271001143100---1365------44--------6289999999999999962
Q gi|255764463|r  106 PDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGI---LCDG------EI--------VNDETIELISHAAVIQADA  168 (337)
Q Consensus       106 ~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi---~~~g------~I--------dND~Tl~~L~k~Al~~A~A  168 (337)
                      .+..+..+++.+|..-++..++.- +..|+|.-+|.--   ..+.      -.        .-+...+.+.+.+..+.+|
T Consensus       113 ~~~~~~~~~~~~k~~~~~vpligf-~ggP~Tla~~l~~~~~~~~~~~~~~~~~~~P~~~~~ll~~~t~~~~~~~~~qi~~  191 (338)
T 2eja_A          113 QNAYVYEIIKRVKEAQDEVPVIGF-AGAPFTLLSYLIEGGASKDFKSTKLFMWENPKEYKRLMDILTETVLAYLKEQIKA  191 (338)
T ss_dssp             GGHHHHHHHHHHHHHCCSSCEEEE-EECHHHHHHHHHHTSCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHCCCCCCEEEE-CCCHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             201389999998860677546886-5858999999972776405788999998493789999999999999999999971


Q ss_pred             CCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             89735246676779999999998778857730033666435430101675310244677774431572114788988887
Q gi|255764463|r  169 GADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASI  248 (337)
Q Consensus       169 GaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~  248 (337)
                      |||+|.-.|..-+                  +||- ..|..-.+-+.+..++.-... |+.... +-.++... +  ...
T Consensus       192 Gad~i~i~d~~a~------------------~ls~-~~~~ef~~p~~~~i~~~~~~~-~~~~~i-h~~~~~~~-~--~~~  247 (338)
T 2eja_A          192 GADVVQIFDSWVN------------------NLSL-EDYGEYVYPYVNYLISELKDF-SDTPVI-YFFRGSSS-F--IDL  247 (338)
T ss_dssp             TCSEEEEEETTGG------------------GSCH-HHHHHHTHHHHHHHHHHHHHH-CCCCEE-EEESSHHH-H--HHH
T ss_pred             CCCEEEEECCCCC------------------CCCH-HHHHHHHCCHHHHHHHHHHHC-CCCCEE-EECCCCHH-H--HHH
T ss_conf             7883376323345------------------4788-999987113699999999743-799648-72376023-4--444


Q ss_pred             HHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC--EEEE
Q ss_conf             664089879955311458999999962499899993461899999999888978899999999999772699--9982
Q gi|255764463|r  249 DIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCD--GIFT  324 (337)
Q Consensus       249 D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd--~Iit  324 (337)
                      -.+-|+|.+=+-....    +.++++.++..+ .=+|+-.  ++     .|  +.+.+.-|+..+++..|.+  +|+.
T Consensus       248 ~~~~~~d~~s~d~~~d----l~~a~~~~~~~l-~GNldP~--~l-----~~--~~e~i~~~~~~~l~~~~~~~g~I~~  311 (338)
T 2eja_A          248 AVDYRADALSVDWSVD----IPELFKIYDKGF-QGNLEPA--VL-----YA--SEEVIEEKTLGLLRRIPVKTRYVFN  311 (338)
T ss_dssp             HTTSCCSEEECCTTSC----HHHHHHHCCSEE-ECCBCGG--GG-----GS--CHHHHHHHHHHHHTTCCCSSSEEBC
T ss_pred             HHCCCCCCCCCCCCCC----HHHHHHHCCCCE-EECCCHH--HH-----CC--CHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf             3026766304566689----999998589954-8489827--87-----69--9999999999999966999997997


No 201
>3cu5_A Two component transcriptional regulator, ARAC family; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=29.09  E-value=28  Score=14.85  Aligned_cols=63  Identities=17%  Similarity=0.157  Sum_probs=43.5

Q ss_pred             CHHHHHHHHHHHHHHCCCCEEEEC---CCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf             114788988887664089879955---3114589999999624-99899993461899999999888978
Q gi|255764463|r  237 ANVQEAIREASIDIQESADMLLVK---PGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN  302 (337)
Q Consensus       237 ~n~~eA~~e~~~D~~EGAD~lMVK---Pa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d  302 (337)
                      .|..||+....   ++..|++.+-   |+|.=+++++.+++.. ..|+...-..++...+..|-+.|..+
T Consensus        36 ~~g~eal~~~~---~~~pdlillDi~MP~~dG~el~~~i~~~~p~~~iI~lT~~~~~~~~~~a~~~Ga~~  102 (141)
T 3cu5_A           36 DDGINAIQIAL---KHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIR  102 (141)
T ss_dssp             SSHHHHHHHHT---TSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCE
T ss_pred             CCHHHHHHHHH---HCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCE
T ss_conf             99999999998---67999899736899999999999999758799399997879999999999869998


No 202
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, putative; enolase, structural genomics, PSI, protein structure initiative, nysgrc; 2.00A {Roseovarius nubinhibens ism}
Probab=28.82  E-value=28  Score=14.82  Aligned_cols=75  Identities=12%  Similarity=0.046  Sum_probs=47.4

Q ss_pred             CCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             11666758988110488878632889999999999998889367633025633455445421576537999999999730
Q gi|255764463|r   42 LPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI  121 (337)
Q Consensus        42 ~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f  121 (337)
                      .|++--=|...++.|+.-.-....+.+.+.++++...+.|.+.+-+-.+.+.              .--.+.++++++.+
T Consensus       121 ~pl~~lLgg~~~~~i~~~~~~~~~~~~e~~~~~~~~~~~G~~~~K~k~~~~~--------------~~d~~~i~~ir~~~  186 (379)
T 2rdx_A          121 QPVWMLLGGKLCDGAPMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGADW--------------QSDIDRIRACLPLL  186 (379)
T ss_dssp             CBHHHHTTSCCCSSEEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCSCH--------------HHHHHHHHHHGGGS
T ss_pred             CCHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCH--------------HHHHHHHHHHHHHC
T ss_conf             8624315986455553010467799899989999987438622432047871--------------88999999976302


Q ss_pred             C-CCEEEECC
Q ss_conf             1-44798613
Q gi|255764463|r  122 P-NIGIITDV  130 (337)
Q Consensus       122 p-dl~vi~DV  130 (337)
                      + +..++.|.
T Consensus       187 g~~~~l~vDa  196 (379)
T 2rdx_A          187 EPGEKAMADA  196 (379)
T ss_dssp             CTTCEEEEEC
T ss_pred             CCCCEEECCC
T ss_conf             8730353245


No 203
>2pmq_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, isomerase, PSI-2, protein structure initiative; HET: MSE; 1.72A {Roseovarius SP}
Probab=28.76  E-value=29  Score=14.82  Aligned_cols=33  Identities=15%  Similarity=0.033  Sum_probs=16.7

Q ss_pred             CCCCEEEECCC----HHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             08987995531----1458999999962499899993
Q gi|255764463|r  252 ESADMLLVKPG----LPYLDVCFRIKEKFGLPTFAYQ  284 (337)
Q Consensus       252 EGAD~lMVKPa----~~yLDii~~~k~~~~~P~~aYq  284 (337)
                      ..+|++.+||.    +.-.=-|..+.+..++|+..-.
T Consensus       259 ~~~d~~~~d~~~~GGit~~~~i~~~a~~~gi~~~~~~  295 (377)
T 2pmq_A          259 SLVDGFGMKVSRIGGLQHMRAFRDFCAARNLPHTCDD  295 (377)
T ss_dssp             TCCSEECCBHHHHTSHHHHHHHHHHHHHHTCCEECBC
T ss_pred             CCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECC
T ss_conf             7878740345433761699999999998599887678


No 204
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=28.61  E-value=29  Score=14.80  Aligned_cols=213  Identities=16%  Similarity=0.196  Sum_probs=100.8

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH---HHHHHHHHHCCCEEEECCCCCHHHCCCCC
Q ss_conf             889999999999998889367633025633455445421576537999---99999973014479861332710011431
Q gi|255764463|r   65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINE---GICAIKKNIPNIGIITDVALDPFTIHGHD  141 (337)
Q Consensus        65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~r---AIr~IK~~fpdl~vi~DVcLc~YT~hGHc  141 (337)
                      ++.+.+++.+++..+.|..-|=+ |+-  +  +--|+.-..++-=+.|   .++.++..  ++.|    -+|.|..    
T Consensus        26 ~~~~~a~~~a~~~i~~GAdiIDI-G~e--S--TrPg~~~i~~eeE~~Rl~p~i~~~~~~--~~~i----SvDT~~~----   90 (280)
T 1eye_A           26 LDLDDAVKHGLAMAAAGAGIVDV-GGE--S--SRPGATRVDPAVETSRVIPVVKELAAQ--GITV----SIDTMRA----   90 (280)
T ss_dssp             CSHHHHHHHHHHHHHTTCSEEEE-ECC------------------HHHHHHHHHHHHHT--TCCE----EEECSCH----
T ss_pred             CCHHHHHHHHHHHHHCCCCEEEE-CCE--E--CCCCCCCCCHHHHHHCCCCEEEEECCC--CCEE----EEEECCH----
T ss_conf             89999999999999889949998-962--0--799895269999863246513321135--8447----6852768----


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE-CCCCC-CCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHH
Q ss_conf             001365446289999999999999962897352-46676-7799999999987788577300336664354301016753
Q gi|255764463|r  142 GILCDGEIVNDETIELISHAAVIQADAGADIIA-PSEMM-DGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAI  219 (337)
Q Consensus       142 Gi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA-PSdMM-DGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~  219 (337)
                                     ..++.|   .++|||+|- -|... |.....+-   .+.+.. +.+| ++-       |      
T Consensus        91 ---------------~Va~~a---l~~Ga~iINDvsg~~~d~~m~~~~---a~~~~~-~ilm-H~~-------g------  134 (280)
T 1eye_A           91 ---------------DVARAA---LQNGAQMVNDVSGGRADPAMGPLL---AEADVP-WVLM-HWR-------A------  134 (280)
T ss_dssp             ---------------HHHHHH---HHTTCCEEEETTTTSSCTTHHHHH---HHHTCC-EEEE-CCC-------C------
T ss_pred             ---------------HHHHHH---HHCCCEEEEECCCCCCCHHHHHHH---HHCCCC-EEEE-ECC-------C------
T ss_conf             ---------------999999---973983897304354661677776---404787-6998-315-------6------


Q ss_pred             HCCCCCCCC-CCCCCCCCCHHHHHHHHHHHH-HHCCC--CEEEECCCHHH-------HHHHHHHHHH--CCCCEEEEECC
Q ss_conf             102446777-744315721147889888876-64089--87995531145-------8999999962--49989999346
Q gi|255764463|r  220 STRDLLKGD-KKTYYLDPANVQEAIREASID-IQESA--DMLLVKPGLPY-------LDVCFRIKEK--FGLPTFAYQVS  286 (337)
Q Consensus       220 ~S~p~~~gd-r~sYQmd~~n~~eA~~e~~~D-~~EGA--D~lMVKPa~~y-------LDii~~~k~~--~~~P~~aYqVS  286 (337)
                        .|....+ ...|.-.......-+.+.... ..-|-  +=+++-||+-|       +.+++.++..  ++.|+.+ .+|
T Consensus       135 --~~~~~~~~~~~~~d~i~~v~~~~~~~~~~~~~~Gi~~~~IilDPG~GFgKt~~~n~~ll~~l~~~~~~~~PiLv-G~S  211 (280)
T 1eye_A          135 --VSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELVATGIPVLV-GAS  211 (280)
T ss_dssp             --SCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHHTTSSCBEE-CCT
T ss_pred             --CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE-EEH
T ss_conf             --65332223554553055579999999999998798644499808867775762589999888786148983698-613


Q ss_pred             HHHHHHHHHHHCC---C--CCH---HHHHHHHHHHHHHHCCCEEEECHHHHHHHHH
Q ss_conf             1899999999888---9--788---9999999999977269999820189999998
Q gi|255764463|r  287 GEYAMIKAASLQG---W--INK---NDAMMESLLAFKRAGCDGIFTYFAMEAARIL  334 (337)
Q Consensus       287 GEYami~~a~~~g---~--~d~---~~~~~E~l~~~kRAGAd~IitY~A~~~a~~L  334 (337)
                      =- ++|..-....   .  .++   -.+..+++...  -||++|=+==-++..+-|
T Consensus       212 RK-sfig~~l~~~~~~~~~~~~R~~~T~a~~~~a~~--~Ga~iiRVHDV~e~~~al  264 (280)
T 1eye_A          212 RK-RFLGALLAGPDGVMRPTDGRDTATAVISALAAL--HGAWGVRVHDVRASVDAI  264 (280)
T ss_dssp             TC-HHHHHHTCCSSSCCCCGGGGHHHHHHHHHHHHH--TTCSEEEESCHHHHHHHH
T ss_pred             HH-HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH--CCCCEEEECCHHHHHHHH
T ss_conf             77-899987558765558867631899999999998--799999979989999999


No 205
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus HB8} PDB: 2iss_A*
Probab=28.59  E-value=29  Score=14.80  Aligned_cols=38  Identities=24%  Similarity=0.094  Sum_probs=29.1

Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf             46777744315721147889888876640898799553
Q gi|255764463|r  224 LLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKP  261 (337)
Q Consensus       224 ~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKP  261 (337)
                      .+.-||..|..|+-+.---+-|+.+-|.|||.|+=-|-
T Consensus       116 ~~HI~K~~f~vPFVCGarnLgEALRRI~EGAaMIRTKG  153 (297)
T 2zbt_A          116 EHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKG  153 (297)
T ss_dssp             SCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECC
T ss_pred             CCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf             13454214777744588872899998860022311568


No 206
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A
Probab=28.21  E-value=29  Score=14.75  Aligned_cols=64  Identities=25%  Similarity=0.354  Sum_probs=40.2

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCH--------HHHHHHHHHHHHC--CCEEEECCCCC
Q ss_conf             89999999999998889367633025633455445421576537--------9999999997301--44798613327
Q gi|255764463|r   66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNL--------INEGICAIKKNIP--NIGIITDVALD  133 (337)
Q Consensus        66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dgl--------v~rAIr~IK~~fp--dl~vi~DVcLc  133 (337)
                      ....+.+.+..+.++||++|-|-|+.+... +..|   |++-++        -....+++-++.-  .|.||.|+.+-
T Consensus        38 d~~gi~~~LdyLk~LGv~~I~l~Pi~~~~~-~~~G---Y~~~dy~~vd~~~Gt~~dfk~Lv~~aH~~GI~VilDvV~N  111 (589)
T 3aj7_A           38 DMKGIASKLEYIKELGADAIWISPFYDSPQ-DDMG---YDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVIN  111 (589)
T ss_dssp             CHHHHHHTHHHHHHHTCSEEEECCCEECCC-TTTT---SSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred             CHHHHHHHHHHHHHCCCCEEEECCCCCCCC-CCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCC
T ss_conf             999999722899875998899697756999-8989---4853678757001999999999999998889899997867


No 207
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, structural genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima MSB8} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=27.95  E-value=29  Score=14.72  Aligned_cols=65  Identities=20%  Similarity=0.154  Sum_probs=39.4

Q ss_pred             EEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCC
Q ss_conf             1104888786328899999999999988893676330256334554454215765379999999997301447986133
Q gi|255764463|r   53 VESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVA  131 (337)
Q Consensus        53 k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVc  131 (337)
                      +.+|+.---+...+.+...+++++..+.|.+.+-+=.  ....           + --...+++|++.+|++.++.|..
T Consensus       126 ~~~i~~~~~i~~~~~~~~~~~~~~~~~~Gf~~~KiKv--~~~~-----------~-~d~~~~~~i~~~~~~~~l~lDaN  190 (345)
T 2zad_A          126 RDEIETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKV--GENL-----------K-EDIEAVEEIAKVTRGAKYIVDAN  190 (345)
T ss_dssp             CSEEEBCEEECSCCHHHHHHHHHHHHHTTCSEEEEEC--CSCH-----------H-HHHHHHHHHHHHSTTCEEEEECT
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC--CCCC-----------H-HHHHHHHHHHHHHCCCCEEEECC
T ss_conf             3320231025779999999999999975887013466--8770-----------8-89999999997514766177607


No 208
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=27.86  E-value=30  Score=14.71  Aligned_cols=81  Identities=11%  Similarity=0.130  Sum_probs=50.8

Q ss_pred             CCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             11666758988110488878632889999999999998889367633025633455445421576537999999999730
Q gi|255764463|r   42 LPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNI  121 (337)
Q Consensus        42 ~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~f  121 (337)
                      +|++---|...+..++.--.....+.+....++.+..+.|.+.+-+-.+..+.             .-..+.++.+++.+
T Consensus       122 ~pl~~lLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~kiKv~~~~~-------------~~d~~~i~~i~~~~  188 (377)
T 3my9_A          122 LSVADLLGGRVRDRIPLSFSIADPDFDADLERMRAMVPAGHTVFKMKTGVKPH-------------AEELRILETMRGEF  188 (377)
T ss_dssp             CBTTGGGTCCSCSEEEBCEEECCSSHHHHHHHHHHHTTTTCCEEEEECSSSCH-------------HHHHHHHHHHHHHH
T ss_pred             CCEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC-------------HHHHHHHHHHHHHC
T ss_conf             71354046775531255420257737788999999875055200134567660-------------89999999999862


Q ss_pred             -CCCEEEECCCCCHHH
Q ss_conf             -144798613327100
Q gi|255764463|r  122 -PNIGIITDVALDPFT  136 (337)
Q Consensus       122 -pdl~vi~DVcLc~YT  136 (337)
                       |++.++.|. -+.||
T Consensus       189 ~~~~~l~vDa-N~~~~  203 (377)
T 3my9_A          189 GERIDLRLDF-NQALT  203 (377)
T ss_dssp             GGGSEEEEEC-TTCCC
T ss_pred             CCCEEEEECC-CCCCC
T ss_conf             8853377064-55899


No 209
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrolase, (beta/alpha)8-barrel; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A*
Probab=27.81  E-value=30  Score=14.71  Aligned_cols=26  Identities=31%  Similarity=0.263  Sum_probs=21.7

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf             99999999999988893676330256
Q gi|255764463|r   67 IDVAVEKIKQVADLGIPAIAIFPNIP   92 (337)
Q Consensus        67 id~L~~eie~~~~lGI~av~LFp~I~   92 (337)
                      -..+.+.+..+.++||++|-|=|+..
T Consensus        27 ~~~i~~kLdyL~~LGvtaIwl~Pv~~   52 (435)
T 1mxg_A           27 WDHIRSKIPEWYEAGISAIWLPPPSK   52 (435)
T ss_dssp             HHHHHHHHHHHHHHTCCEEECCCCSE
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCCEE
T ss_conf             99999968999962999899596700


No 210
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=27.80  E-value=30  Score=14.71  Aligned_cols=126  Identities=17%  Similarity=0.251  Sum_probs=71.5

Q ss_pred             CCEEEECCCCCEEECCCCCCCCCCCHHHH---HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             11666758988110488878632889999---999999998889367633025633455445421576537999999999
Q gi|255764463|r   42 LPIFLTSGEKTVESINSMPDVMRMSIDVA---VEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIK  118 (337)
Q Consensus        42 ~PiFV~eg~~~k~~I~SMPGv~R~Sid~L---~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK  118 (337)
                      .|++|.=.+        =+|-|-||-+++   .+.++.+.++|+..| .||...++     |+  .|     ..+.+.+-
T Consensus        52 ipv~vMIRP--------R~GdF~Ys~~E~~~M~~dI~~~k~~G~dGv-VfG~L~~d-----g~--iD-----~~~~~~Li  110 (256)
T 1twd_A           52 IPVHPIIRP--------RGGDFCYSDGEFAAILEDVRTVRELGFPGL-VTGVLDVD-----GN--VD-----MPRMEKIM  110 (256)
T ss_dssp             SCEEEBCCS--------SSSCSCCCHHHHHHHHHHHHHHHHTTCSEE-EECCBCTT-----SS--BC-----HHHHHHHH
T ss_pred             CCEEEEEEC--------CCCCCCCCHHHHHHHHHHHHHHHHCCCCEE-EEEEECCC-----CC--CC-----HHHHHHHH
T ss_conf             974999845--------899888899999999999999998599967-88668899-----98--49-----99999999


Q ss_pred             HHHCCCEEEE----CCCCCHHH------CCCCCCCCCCC----CCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHH
Q ss_conf             7301447986----13327100------11431001365----4462899999999999999628973524667677999
Q gi|255764463|r  119 KNIPNIGIIT----DVALDPFT------IHGHDGILCDG----EIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQ  184 (337)
Q Consensus       119 ~~fpdl~vi~----DVcLc~YT------~hGHcGi~~~g----~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~  184 (337)
                      +..+.+-+.-    |.|-||+.      ..|-+.|+.-|    -.+.-+.|..|.++    + .|--|++-+.--..-+.
T Consensus       111 ~~a~~l~vTFHRAfD~~~d~~~al~~Li~lG~~rILTSG~~~~a~~G~~~L~~L~~~----a-~~~iIm~GgGI~~~Ni~  185 (256)
T 1twd_A          111 AAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSGQKSDALQGLSKIMELIAH----R-DAPIIMAGAGVRAENLH  185 (256)
T ss_dssp             HHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECTTSSSTTTTHHHHHHHHTS----S-SCCEEEEESSCCTTTHH
T ss_pred             HHHCCCCEEEECCHHHHCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHH----C-CCCEEEEECCCCHHHHH
T ss_conf             985768647744256528999999999975989786578967777769999999985----6-99389972777999999


Q ss_pred             HHHHHHHHCCCCC
Q ss_conf             9999998778857
Q gi|255764463|r  185 EIRKKLDSHGHIN  197 (337)
Q Consensus       185 aIR~~Ld~~g~~~  197 (337)
                      .|.   + .|+..
T Consensus       186 ~l~---~-tG~~e  194 (256)
T 1twd_A          186 HFL---D-AGVLE  194 (256)
T ss_dssp             HHH---H-HTCSE
T ss_pred             HHH---H-CCCCE
T ss_conf             999---7-79887


No 211
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, symmetric dimer, signaling protein; NMR {Helicobacter pylori J99}
Probab=27.63  E-value=30  Score=14.69  Aligned_cols=24  Identities=17%  Similarity=0.407  Sum_probs=11.5

Q ss_pred             CCCEEECCCCCCCHHHHHHHHHHH
Q ss_conf             897352466767799999999987
Q gi|255764463|r  169 GADIIAPSEMMDGRVQEIRKKLDS  192 (337)
Q Consensus       169 GaDivAPSdMMDGrV~aIR~~Ld~  192 (337)
                      |-+.-.-+...|-.|..+|+.|+.
T Consensus       174 ~~~~~~~~~tld~~I~rLRkKL~~  197 (223)
T 2hqr_A          174 EEPEMVTPNVIEVAINQIRQKMDK  197 (223)
T ss_dssp             CSSCSCGGGTHHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf             887788867799999999998527


No 212
>1xp3_A Endonuclease IV; NFO, DNA replication, DNA recombination, DNA repair, spine, structural genomics, structural proteomics in europe, hydrolase; 2.57A {Bacillus anthracis} SCOP: c.1.15.1
Probab=27.11  E-value=30  Score=14.63  Aligned_cols=58  Identities=16%  Similarity=0.352  Sum_probs=33.5

Q ss_pred             HHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCC--CCCCCCCCHHHHHHHHHHHHHCCC-CEEEEEEC
Q ss_conf             8999863477888773311666758988110488--878632889999999999998889-36763302
Q gi|255764463|r   25 WIREMVREHRLSVSDLILPIFLTSGEKTVESINS--MPDVMRMSIDVAVEKIKQVADLGI-PAIAIFPN   90 (337)
Q Consensus        25 ~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~S--MPGv~R~Sid~L~~eie~~~~lGI-~av~LFp~   90 (337)
                      ..|.++.|+.+      -|+||+--=-.  -..|  =|.+.+.|++.+.++++.+.++|+ +.+.+-|+
T Consensus        62 ~~~~~~~~~~~------~~i~vHapYli--NLas~~~~~~r~~Si~~l~~~l~~a~~Lg~a~~vV~HpG  122 (307)
T 1xp3_A           62 AGRKHMEQNGI------EEIIIHAPYII--NVGNTTKPETFQLGVDFLRMEIERTSALGVAKQIVLHPG  122 (307)
T ss_dssp             HHHHHHHHTTC------CCEEEECCTTC--CTTCCSCHHHHHHHHHHHHHHHHHHHHSSSCCEEEECCE
T ss_pred             HHHHHHHHCCC------CCEEEECCEEE--CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf             99999997389------85697145022--556654089999999999999999998488987998997


No 213
>2pcq_A Putative dihidrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, structural genomics, NPPSFA; 2.10A {Thermus thermophilus HB8}
Probab=27.10  E-value=30  Score=14.63  Aligned_cols=34  Identities=15%  Similarity=0.137  Sum_probs=21.4

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             4888786328899999999999988893676330
Q gi|255764463|r   56 INSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFP   89 (337)
Q Consensus        56 I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp   89 (337)
                      ++-+-|+...|....++.++++.++|+.+++++|
T Consensus        63 ~pvi~gv~~~s~~~~i~~a~~a~~~G~d~v~~~p   96 (283)
T 2pcq_A           63 KPFLVGLMEETLPQAEGALLEAKAAGAMALLATP   96 (283)
T ss_dssp             SCCEEEECCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHHCCCCEEEECC
T ss_conf             9879996787568899998888864998799558


No 214
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, alpha-1,4-glucan-4-glucanohydrolase, thermostability, calcium, sodium; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=26.71  E-value=31  Score=14.58  Aligned_cols=66  Identities=15%  Similarity=0.213  Sum_probs=40.3

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCC--------------CC-CHHHHHHHHHHHHH-C-CCEEEE
Q ss_conf             8999999999999888936763302563345544542157--------------65-37999999999730-1-447986
Q gi|255764463|r   66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIID--------------PD-NLINEGICAIKKNI-P-NIGIIT  128 (337)
Q Consensus        66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n--------------~d-glv~rAIr~IK~~f-p-dl~vi~  128 (337)
                      .-..|.+.+..+.++|+.+|-|=|..+.......|-..++              +. |=. ...+++-+++ - .|-||.
T Consensus        22 ~w~~i~~kLdyL~~lGv~aI~l~Pi~~~~~~~~~GY~~~~~y~~~~~~~~~~vd~~~Gt~-~dfk~LV~~aH~~Gi~Vil  100 (515)
T 1hvx_A           22 LWTKVANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTK-AQYLQAIQAAHAAGMQVYA  100 (515)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCH-HHHHHHHHHHHHTTCEEEE
T ss_pred             CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHCCCEEEE
T ss_conf             099999978999974998899697852889899897756674555455566557889999-9999999999988898999


Q ss_pred             CCCC
Q ss_conf             1332
Q gi|255764463|r  129 DVAL  132 (337)
Q Consensus       129 DVcL  132 (337)
                      |+-+
T Consensus       101 D~V~  104 (515)
T 1hvx_A          101 DVVF  104 (515)
T ss_dssp             EECC
T ss_pred             EECC
T ss_conf             9785


No 215
>3cq0_A Putative transaldolase YGR043C; alpha/beta barrel, pentose shunt, transferase; HET: PG4; 1.90A {Saccharomyces cerevisiae}
Probab=26.57  E-value=31  Score=14.56  Aligned_cols=68  Identities=24%  Similarity=0.260  Sum_probs=37.7

Q ss_pred             CCCCCCCHHHHHHHHHHH----HH--CCCEEEECCCCCHHHCCCCCCC--C--CCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             215765379999999997----30--1447986133271001143100--1--365446289999999999999962897
Q gi|255764463|r  102 HIIDPDNLINEGICAIKK----NI--PNIGIITDVALDPFTIHGHDGI--L--CDGEIVNDETIELISHAAVIQADAGAD  171 (337)
Q Consensus       102 eA~n~dglv~rAIr~IK~----~f--pdl~vi~DVcLc~YT~hGHcGi--~--~~g~IdND~Tl~~L~k~Al~~A~AGaD  171 (337)
                      -|+|-++-+-+|.+.++-    ..  |+++|=.     |-|..|---+  +  .+| |.--.|+--=..||+.-|+||+.
T Consensus       113 la~dt~~ti~~A~~l~~~~~~~~i~~~nv~IKI-----PaT~eGi~A~~~L~~~eG-I~vNvTLiFS~~Qa~aaa~Ag~~  186 (339)
T 3cq0_A          113 LSFDKKATVKKALHIIKLYKDAGVPKERVLIKI-----ASTWEGIQAARELEVKHG-IHCNMTLLFSFTQAVACAEANVT  186 (339)
T ss_dssp             GTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEE-----ECSHHHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHTTCS
T ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEC-----CCCHHHHHHHHHHHHHCC-CEEEEEEECCHHHHHHHHHCCCC
T ss_conf             357778999999999999885278876468837-----998799999999998559-70436774379999999975955


Q ss_pred             EEEC
Q ss_conf             3524
Q gi|255764463|r  172 IIAP  175 (337)
Q Consensus       172 ivAP  175 (337)
                      .|+|
T Consensus       187 ~iSp  190 (339)
T 3cq0_A          187 LISP  190 (339)
T ss_dssp             EEEE
T ss_pred             EEEH
T ss_conf             7736


No 216
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=26.18  E-value=32  Score=14.52  Aligned_cols=164  Identities=13%  Similarity=0.207  Sum_probs=90.3

Q ss_pred             CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCC
Q ss_conf             88999999999999888936763302563345544542157653799999999973014479861332710011431001
Q gi|255764463|r   65 MSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGIL  144 (337)
Q Consensus        65 ~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~  144 (337)
                      +|+..+-+.++-+-          +.|+ -.|=..|+.++-|+..+.+-|...|+.  ++.+.++=-|-+|-       +
T Consensus        23 lgl~~leD~Le~ag----------~yID-~~K~g~GTs~l~~~~~L~eKI~l~~~~--~V~v~~GGtlfE~a-------~   82 (251)
T 1qwg_A           23 LPPKFVEDYLKVCG----------DYID-FVKFGWGTSAVIDRDVVKEKINYYKDW--GIKVYPGGTLFEYA-------Y   82 (251)
T ss_dssp             CCHHHHHHHHHHHG----------GGCS-EEEECTTGGGGSCHHHHHHHHHHHHTT--TCEEEECHHHHHHH-------H
T ss_pred             CCHHHHHHHHHHHH----------HHEE-EEEECCCEEEECCHHHHHHHHHHHHHC--CCEEECCCHHHHHH-------H
T ss_conf             99899999999735----------4435-898557565005889999999999986--98275795799999-------9


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC----C-CCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHH
Q ss_conf             3654462899999999999999628973524667----6-7799999999987788577300336664354301016753
Q gi|255764463|r  145 CDGEIVNDETIELISHAAVIQADAGADIIAPSEM----M-DGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAI  219 (337)
Q Consensus       145 ~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdM----M-DGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~  219 (337)
                      ..|+      ++.+.+.+   .+-|.|+|-=||=    = |-+...|+.+ -++||.=.+=  ...|+.+.         
T Consensus        83 ~q~~------~~~y~~~~---~~lGf~~IEiSdG~i~i~~~~~~~~I~~a-~~~G~~V~~E--vG~K~~~~---------  141 (251)
T 1qwg_A           83 SKGK------FDEFLNEC---EKLGFEAVEISDGSSDISLEERNNAIKRA-KDNGFMVLTE--VGKKMPDK---------  141 (251)
T ss_dssp             HTTC------HHHHHHHH---HHHTCCEEEECCSSSCCCHHHHHHHHHHH-HHTTCEEEEE--ECCSSHHH---------
T ss_pred             HCCC------HHHHHHHH---HHCCCCEEEECCCCCCCCHHHHHHHHHHH-HHCCCEEEEC--CCCCCCCC---------
T ss_conf             7496------89999999---98599889973984468989999999999-8589989505--45788886---------


Q ss_pred             HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEC-------CCHH------HHHHHHHHHHHCCCCEEEE
Q ss_conf             10244677774431572114788988887664089879955-------3114------5899999996249989999
Q gi|255764463|r  220 STRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVK-------PGLP------YLDVCFRIKEKFGLPTFAY  283 (337)
Q Consensus       220 ~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVK-------Pa~~------yLDii~~~k~~~~~P~~aY  283 (337)
                                 ..++   ...+-++.+..|.+-||++||+.       .|+.      --|++..+-+.+.+--..+
T Consensus       142 -----------~~~~---~~~~~i~~~~~~LeaGA~~ViiEarEsG~~~Gi~~~~g~~r~~~i~~i~~~~~~~~iif  204 (251)
T 1qwg_A          142 -----------DKQL---TIDDRIKLINFDLDAGADYVIIEGRESGKGKGLFDKEGKVKENELDVLAKNVDINKVIF  204 (251)
T ss_dssp             -----------HTTC---CHHHHHHHHHHHHHHTCSEEEECCTTTCCSSTTBCTTSCBCHHHHHHHHTTSCGGGEEE
T ss_pred             -----------CCCC---CHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCEECCCCCCCHHHHHHHHHHCCCCCEEE
T ss_conf             -----------6666---99999999999996688178862232077601346888701889999998589202799


No 217
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=26.08  E-value=32  Score=14.51  Aligned_cols=156  Identities=16%  Similarity=0.179  Sum_probs=88.9

Q ss_pred             CCHHHCCCCEEEE---CCCCCEEECCCCCCCC-------CC--CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
Q ss_conf             8887733116667---5898811048887863-------28--8999999999999888936763302563345544542
Q gi|255764463|r   35 LSVSDLILPIFLT---SGEKTVESINSMPDVM-------RM--SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSH  102 (337)
Q Consensus        35 Ls~~dLI~PiFV~---eg~~~k~~I~SMPGv~-------R~--Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~Gse  102 (337)
                      .+.++.||=||+.   +|......+..++...       ++  .+..+.+.+..+.+|||++|-|=|..+...++ .+-+
T Consensus       103 ~~~~~viY~I~pdRF~ngd~~nd~~~~~~~~~~~~~~~~~~gGDl~GI~~~LdYLk~LGvtaIwL~Pi~e~~~~~-~syh  181 (601)
T 3edf_A          103 FGPGDAIYQIMPDRFANGDPSNDNVAGMREQADRRHGGGRHGGDIRGTIDHLDYIAGLGFTQLWPTPLVENDAAA-YSYH  181 (601)
T ss_dssp             CCTTCCEEEECHHHHCCSCGGGSSCTTCSCCCCTTSTTSCCCCCHHHHHHTHHHHHHTTCCEEEESCCEECCCSS-SGGG
T ss_pred             CCCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC-CCCC
T ss_conf             176887999544650479976576766655666655688777379999985199997699889969985788888-8899


Q ss_pred             CCCCCCH------------HHHHHHHHHHHHCCCEEEECCCCCHHH----------------------------------
Q ss_conf             1576537------------999999999730144798613327100----------------------------------
Q gi|255764463|r  103 IIDPDNL------------INEGICAIKKNIPNIGIITDVALDPFT----------------------------------  136 (337)
Q Consensus       103 A~n~dgl------------v~rAIr~IK~~fpdl~vi~DVcLc~YT----------------------------------  136 (337)
                      .|+..++            ..+-|.+.+++  .|-||.|+-+-.-.                                  
T Consensus       182 GY~~~Dy~~VDp~fGt~edf~~Lv~~aH~~--GikVIlD~V~NH~~~~h~w~~d~~~~d~~~~~~~~~~~~~~~~~~~~~  259 (601)
T 3edf_A          182 GYAATDHYRIDPRYGSNEDFVRLSTEARKR--GMGLIQDVVLSHIGKHHWWMKDLPTPDWINYGGKFVPTQHHRVAVQDP  259 (601)
T ss_dssp             CCSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECCSBCCTTSGGGGSCSSTTSBGGGGSCCBCCCCGGGGGCT
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             957557786284559999999999999878--998999860566646764120278876544466668755555567886


Q ss_pred             --CCC-------CCCCCC--CCCCCHHHHHHHHHHHHHHHHH-CCCCEE---ECCCCCCCHHHHHHHHHHHC
Q ss_conf             --114-------310013--6544628999999999999996-289735---24667677999999999877
Q gi|255764463|r  137 --IHG-------HDGILC--DGEIVNDETIELISHAAVIQAD-AGADII---APSEMMDGRVQEIRKKLDSH  193 (337)
Q Consensus       137 --~hG-------HcGi~~--~g~IdND~Tl~~L~k~Al~~A~-AGaDiv---APSdMMDGrV~aIR~~Ld~~  193 (337)
                        .++       |++.-.  |=.-.|.+..+.|.+.+.-..+ .|+|-.   +...+-..-....++++.+.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~pDLn~~np~v~~~l~~~~~~Wi~~~giDGfR~D~~~~~~~~f~~~~~~~i~~~  331 (601)
T 3edf_A          260 YAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYAGLSGLRIDTYGYSDGAFLTEYTRRLMAE  331 (601)
T ss_dssp             TCCHHHHHHHHHSBSSTTSCBBCTTSHHHHHHHHHHHHHHHHHHTCSEEEESSGGGSCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf             536676765313567788653265999999999888777776158655875255655567799999877765


No 218
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=25.78  E-value=32  Score=14.47  Aligned_cols=150  Identities=15%  Similarity=0.203  Sum_probs=88.8

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHH--------HHHHHHHHHHH-C-CCEEEECCCCCHH
Q ss_conf             899999999999988893676330256334554454215765379--------99999999730-1-4479861332710
Q gi|255764463|r   66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLI--------NEGICAIKKNI-P-NIGIITDVALDPF  135 (337)
Q Consensus        66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv--------~rAIr~IK~~f-p-dl~vi~DVcLc~Y  135 (337)
                      .+..+.+.+..+.+|||++|-|-|+.+..     +.+-|++-++.        ....|.+-++. . .|.||.|+.+-..
T Consensus       174 dl~Gi~~kLdyLk~LGvt~I~L~Pi~~~~-----~~~GY~~~dy~~vd~~~Gt~~dfk~LV~~aH~~Gi~VilD~V~NH~  248 (588)
T 1j0h_A          174 DLQGIIDHLDYLVDLGITGIYLTPIFRSP-----SNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHC  248 (588)
T ss_dssp             CHHHHHHTHHHHHHHTCCEEEECCCEECS-----SSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred             CHHHHHHHHHHHHHCCCCEEEECCCCCCC-----CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCC
T ss_conf             89999985589986899889969987798-----8789986666776845599999999999999879989998634565


Q ss_pred             HCC------------------------------CC------CCCC--CCCCCCHHHHHHHHHHHHHHHH-HCCCCEE---
Q ss_conf             011------------------------------43------1001--3654462899999999999999-6289735---
Q gi|255764463|r  136 TIH------------------------------GH------DGIL--CDGEIVNDETIELISHAAVIQA-DAGADII---  173 (337)
Q Consensus       136 T~h------------------------------GH------cGi~--~~g~IdND~Tl~~L~k~Al~~A-~AGaDiv---  173 (337)
                      ...                              ++      .+.-  .+-.-.|.+..+.+...+.-.. +-|+|-.   
T Consensus       249 ~~~~~~f~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~p~vr~~~~~~~~~w~~e~giDGfR~D  328 (588)
T 1j0h_A          249 GYEFAPFQDVWKNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGWRLD  328 (588)
T ss_dssp             CTTCHHHHHHHHHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCCCEEEET
T ss_pred             CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_conf             22245422332158876557732003677666776643211467654434559999999999999989997378603653


Q ss_pred             ECCCCCCCHHHHHHHHHHHCCCCCCCEECH----------HHHHHHHHHCCHHHHHHC
Q ss_conf             246676779999999998778857730033----------666435430101675310
Q gi|255764463|r  174 APSEMMDGRVQEIRKKLDSHGHINVGIMPY----------VAKFNSSFYGPYRDAIST  221 (337)
Q Consensus       174 APSdMMDGrV~aIR~~Ld~~g~~~~~ImsY----------saKfaS~fYgPFRdA~~S  221 (337)
                      +...|.......+++++.+.. .++.++..          ...|.+.+-.+|++++-.
T Consensus       329 ~~~~~~~~~~~~~~~~~~~~~-pd~~~ige~~~~~~~~~~~~~~d~~~~~~~~~~~~~  385 (588)
T 1j0h_A          329 VANEIDHEFWREFRQEVKALK-PDVYILGEIWHDAMPWLRGDQFDAVMNYPFTDGVLR  385 (588)
T ss_dssp             TGGGSCHHHHHHHHHHHHHHC-TTCEEEECCSSCCGGGCSSSSCSEEBCHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHCCC-CCCEEEEEECCCCCHHHCCCCCCCCCCCCCCCHHHH
T ss_conf             512266455444443232007-983899975145636554764332236543310222


No 219
>3fem_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, synthase, biosynthetic protein, transferase; 3.02A {Saccharomyces cerevisiae}
Probab=25.68  E-value=32  Score=14.46  Aligned_cols=49  Identities=22%  Similarity=0.118  Sum_probs=32.2

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH
Q ss_conf             6777744315721147889888876640898799553114589999999
Q gi|255764463|r  225 LKGDKKTYYLDPANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIK  273 (337)
Q Consensus       225 ~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k  273 (337)
                      +.-||..|..|+-..---+-|+.+-|.|||.|+=-|----.=||+..+|
T Consensus       113 ~HI~K~~F~vPFVCGarnLGEAlRRI~EGAaMIRTKGEAGTGnVveAVr  161 (297)
T 3fem_A          113 HHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVK  161 (297)
T ss_dssp             CCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCTTTTCHHHHHH
T ss_pred             CCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf             2553103777744168973999998862153224679899856999999


No 220
>3cyj_A Mandelate racemase/muconate lactonizing enzyme- like protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=25.57  E-value=32  Score=14.44  Aligned_cols=80  Identities=15%  Similarity=0.188  Sum_probs=51.2

Q ss_pred             CCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             47788877331166675898811048887863288999999999999888936763302563345544542157653799
Q gi|255764463|r   32 EHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLIN  111 (337)
Q Consensus        32 Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~  111 (337)
                      ...+...+|+      -|...+.++....+....+.+.+.+.++...+.|.+.+-+-.+..             ++ --.
T Consensus       116 ~~~~Pv~~LL------Gg~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~Gf~~~K~k~g~~-------------~~-~d~  175 (372)
T 3cyj_A          116 LLGLPLADAL------PRFHAEVPVYGSGGFTSYPLRRLQEQLGGWAAAGIPRVKMKVGRE-------------PE-KDP  175 (372)
T ss_dssp             HTTCBHHHHS------CCCCSSEEEEEECCCTTSCHHHHHHHHHHHHHTTCCEEEEECCSS-------------GG-GHH
T ss_pred             HCCCCHHHHC------CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC-------------CH-HHH
T ss_conf             6599725415------764442221013566787678999999999972666423444678-------------06-789


Q ss_pred             HHHHHHHHHHC-CCEEEECCC
Q ss_conf             99999997301-447986133
Q gi|255764463|r  112 EGICAIKKNIP-NIGIITDVA  131 (337)
Q Consensus       112 rAIr~IK~~fp-dl~vi~DVc  131 (337)
                      ..|+++++.+| ++.++.|..
T Consensus       176 ~~i~~ir~~~g~~~~l~vDaN  196 (372)
T 3cyj_A          176 ERVRAAREAIGESVELMVDAN  196 (372)
T ss_dssp             HHHHHHHHHHCTTSEEEEECT
T ss_pred             HHHHHHHHHHCCCCEEEEECC
T ss_conf             999999998298946986053


No 221
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytoplasmid or periplasmic), drug target functions, structural genomics; 1.40A {Yersinia pestis} PDB: 1igw_A
Probab=25.47  E-value=33  Score=14.43  Aligned_cols=193  Identities=18%  Similarity=0.205  Sum_probs=101.8

Q ss_pred             HHHHHHCCCCEEEEEECCCCCCCC----CCCCCCCCCCCHHHHHHHHHHHHHC---------------------CCEEEE
Q ss_conf             999998889367633025633455----4454215765379999999997301---------------------447986
Q gi|255764463|r   74 IKQVADLGIPAIAIFPNIPMDLRN----NTGSHIIDPDNLINEGICAIKKNIP---------------------NIGIIT  128 (337)
Q Consensus        74 ie~~~~lGI~av~LFp~I~~~~Kd----~~GseA~n~dglv~rAIr~IK~~fp---------------------dl~vi~  128 (337)
                      +....+.|.+++-|=|.--...-.    ..-..++-+-+=|+..++.|-+..-                     .+-||+
T Consensus        78 A~~~~kaGf~aiYlSG~~vaa~~~~a~~~~PD~~l~~~~~v~~~v~~I~~a~~~~d~~~~~~~~~~~~~~~~d~~~PIIA  157 (435)
T 3lg3_A           78 ALQQAKAGVEAIYMSGWQVAADANTASSMYPDQSLYPVDSVPAVVKRINNSFRRADQIQWSNNIEPGSKGYTDYFLPIVA  157 (435)
T ss_dssp             HHHHHHHTCCSEEECHHHHHHHCCTTCSCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHHTTCCTTSTTCCCCCCCEEE
T ss_pred             HHHHHHHCCCEEEECCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE
T ss_conf             99999839977985336552213567888887366728889999999999999999998630334455556456687688


Q ss_pred             CCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE--------------------CCCCCCCHHHHHHH
Q ss_conf             1332710011431001365446289999999999999962897352--------------------46676779999999
Q gi|255764463|r  129 DVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIA--------------------PSEMMDGRVQEIRK  188 (337)
Q Consensus       129 DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivA--------------------PSdMMDGrV~aIR~  188 (337)
                      |.      +.||.|.+         .+-.+   .-.+.+|||-.|-                    |.+-|=.|+.|.|.
T Consensus       158 Da------DtGfGg~~---------nv~r~---vk~~i~aGaAgiHiEDQ~~~~KkCGH~~GK~lVp~~E~i~kl~AAr~  219 (435)
T 3lg3_A          158 DA------EAGFGGVL---------NAFEL---MKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARL  219 (435)
T ss_dssp             EC------TTCSSSHH---------HHHHH---HHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHH
T ss_pred             EC------CCCCCCHH---------HHHHH---HHHHHHCCCEEEEEECCCCCCCCCCCCCCCEECCHHHHHHHHHHHHH
T ss_conf             77------78898479---------99999---99999769809997156641244667788763279999999999997


Q ss_pred             HHHHCCCCCCCEECHHHHHHHHHHCC---HHHHHHCCCCCCCCC--CC-CCCCCCHHHHHHHHHHHHHHCCCCEEEECCC
Q ss_conf             99877885773003366643543010---167531024467777--44-3157211478898888766408987995531
Q gi|255764463|r  189 KLDSHGHINVGIMPYVAKFNSSFYGP---YRDAISTRDLLKGDK--KT-YYLDPANVQEAIREASIDIQESADMLLVKPG  262 (337)
Q Consensus       189 ~Ld~~g~~~~~ImsYsaKfaS~fYgP---FRdA~~S~p~~~gdr--~s-YQmd~~n~~eA~~e~~~D~~EGAD~lMVKPa  262 (337)
                      +-|..|- ++.|++-.=-.+..+.--   .||.    |-..|+|  .. |... .....||.-+...+. |||+|-+.-.
T Consensus       220 a~d~~~~-~~vIiARTDA~aa~li~s~~d~~D~----~fi~~~Rt~eG~yr~~-~G~~~aI~Ra~ay~~-~ADliw~Et~  292 (435)
T 3lg3_A          220 AADVLGV-PTLLIARTDADAADLLTSDCDPYDR----EFITGDRTAEGFFRTR-AGIEQAISRGLAYAP-YADLVWCETS  292 (435)
T ss_dssp             HHHHHTC-CCEEEEEECTTTCCEESCCCCGGGG----GGEEEEECTTCCEEEC-CSHHHHHHHHHHHGG-GCSEEEECCS
T ss_pred             HHHCCCC-CEEEEEEECHHHHHCCCCCCCCCCC----CCCCCCCCCCCEEEEC-CCCHHHHHHHHHHHH-HCCEEEECCC
T ss_conf             4651799-8699983044654212255521340----1027876867615426-874899999997133-2478863278


Q ss_pred             HHHHHHHHHHH----HHCCCCEEEEECCHHHHH
Q ss_conf             14589999999----624998999934618999
Q gi|255764463|r  263 LPYLDVCFRIK----EKFGLPTFAYQVSGEYAM  291 (337)
Q Consensus       263 ~~yLDii~~~k----~~~~~P~~aYqVSGEYam  291 (337)
                      .|-+..++...    ..+.--+.+|+-|.-+.-
T Consensus       293 ~p~~e~~~~fa~~v~~~~p~~~l~yn~SPsfnw  325 (435)
T 3lg3_A          293 TPDLALAKRFADAVHAQFPGKLLAYNCSPSFNW  325 (435)
T ss_dssp             SCCHHHHHHHHHHHHHHSTTCEEEEECCSSSCH
T ss_pred             CCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC
T ss_conf             998999999987638965787614589999882


No 222
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=25.37  E-value=33  Score=14.42  Aligned_cols=66  Identities=15%  Similarity=0.065  Sum_probs=38.8

Q ss_pred             CCHHHHHHHHHHHHH-------HCCCCEEEEC---CCHHHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHHHHCCCC
Q ss_conf             211478898888766-------4089879955---3114589999999624---9989999346189999999988897
Q gi|255764463|r  236 PANVQEAIREASIDI-------QESADMLLVK---PGLPYLDVCFRIKEKF---GLPTFAYQVSGEYAMIKAASLQGWI  301 (337)
Q Consensus       236 ~~n~~eA~~e~~~D~-------~EGAD~lMVK---Pa~~yLDii~~~k~~~---~~P~~aYqVSGEYami~~a~~~g~~  301 (337)
                      ..|+.||+.-.....       .+--|+++.-   |+|.=+++++.+|+..   ++|+...--++.-.-...+-+.|.-
T Consensus        38 a~~g~eAl~~l~~~~~~~~~~~~~~pdlvllD~~mP~~dG~el~~~ir~~~~~~~iPvI~lT~~~~~~~~~~~~~~Ga~  116 (149)
T 1k66_A           38 CITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSIS  116 (149)
T ss_dssp             ECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCS
T ss_pred             ECCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCC
T ss_conf             8999999999985011111122689998998088999985899999985866699958999789999999999987997


No 223
>3m16_A Transaldolase; dimer, molecular replac swiss-model, structural genomics, PSI-2, protein structure initiative; 2.79A {Oleispira antarctica}
Probab=25.24  E-value=33  Score=14.40  Aligned_cols=69  Identities=23%  Similarity=0.184  Sum_probs=38.1

Q ss_pred             CCCCCCCHHHHHHHHHHH----HH--CCCEEEECCCCCHHHCCCCCCC--CCCCCCCHHHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             215765379999999997----30--1447986133271001143100--136544628999999999999996289735
Q gi|255764463|r  102 HIIDPDNLINEGICAIKK----NI--PNIGIITDVALDPFTIHGHDGI--LCDGEIVNDETIELISHAAVIQADAGADII  173 (337)
Q Consensus       102 eA~n~dglv~rAIr~IK~----~f--pdl~vi~DVcLc~YT~hGHcGi--~~~g~IdND~Tl~~L~k~Al~~A~AGaDiv  173 (337)
                      -++|-++.+-+|.|.++-    .+  |+++|=.     |-|.-|-.-+  +...-|.--.|+--=..||+.-|+|||.+|
T Consensus       109 ls~dt~~~i~~A~~l~~l~~~~~i~~~nv~IKI-----PaT~eGi~A~~~L~~~GI~vN~TLiFS~~Qa~~aa~Aga~~i  183 (329)
T 3m16_A          109 LSFDTQATVAKARKLIRLYQDAGIDSDRILIKI-----ASTWEGIQAAKILEAEGIHCNLTLLFHFAQAQACAEAGTTLI  183 (329)
T ss_dssp             GTTCHHHHHHHHHHHHHHHHHTTCCGGGEEEEE-----ECSHHHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHTTCSEE
T ss_pred             HCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEC-----CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHE
T ss_conf             216888999999999999986178877368857-----887268999999998598122242257999998998084130


Q ss_pred             EC
Q ss_conf             24
Q gi|255764463|r  174 AP  175 (337)
Q Consensus       174 AP  175 (337)
                      +|
T Consensus       184 Sp  185 (329)
T 3m16_A          184 SP  185 (329)
T ss_dssp             EE
T ss_pred             EH
T ss_conf             11


No 224
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis, hydrolase; 1.91A {Thermoanaerobacter tengcongensis MB4}
Probab=25.10  E-value=33  Score=14.39  Aligned_cols=124  Identities=15%  Similarity=0.113  Sum_probs=74.3

Q ss_pred             CCCCCCHHHHHHHHHHHCCCCC-CCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCC--CCHHHHHHHHHHHHHHC
Q ss_conf             6676779999999998778857-73003366643543010167531024467777443157--21147889888876640
Q gi|255764463|r  176 SEMMDGRVQEIRKKLDSHGHIN-VGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLD--PANVQEAIREASIDIQE  252 (337)
Q Consensus       176 SdMMDGrV~aIR~~Ld~~g~~~-~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd--~~n~~eA~~e~~~D~~E  252 (337)
                      ......-+..+-+.+.+.+..+ +.+.|++..+...+    |..   .|..   +..|...  +....+      .-..-
T Consensus       124 ~~~~~~~~~~v~~~l~~~~~~~~vi~~sf~~~~l~~~----~~~---~p~~---~~~~~~~~~~~~~~~------~~~~~  187 (252)
T 2pz0_A          124 IVLYPGIEEKLIKAIKEYNFEERVIISSFNHYSLRDV----KKM---APHL---KIGLLYQCGLVEPWH------MALRM  187 (252)
T ss_dssp             SCCCTTHHHHHHHHHHHTTCTTTEEEEESBHHHHHHH----HHH---CTTS---EEEEEECSBCSSTHH------HHHHT
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH----HHH---CCCC---EEEEEECCCCCCHHH------HHHCC
T ss_conf             5557248999999999729988789995898999999----985---8885---289984156665355------54303


Q ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHH
Q ss_conf             89879955311458999999962499899993461899999999888978899999999999772699998201899999
Q gi|255764463|r  253 SADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAAR  332 (337)
Q Consensus       253 GAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~  332 (337)
                      +.+.+...-....-++|..+++. +++|.+|-|-                ..    +.+.-+.+.|+|.|+|=+-..+.+
T Consensus       188 ~~~~i~~~~~~~~~~~i~~~~~~-g~~v~~wTvn----------------~~----~~~~~l~~~GvdgI~TD~P~~l~~  246 (252)
T 2pz0_A          188 EAYSLHPFYFNIIPELVEGCKKN-GVKLFPWTVD----------------RK----EDMERMIKAGVDGIITDDPETLIN  246 (252)
T ss_dssp             TCSEEEEBGGGCCHHHHHHHHHT-TCEECCBCCC----------------SH----HHHHHHHHHTCSEEEESCHHHHHH
T ss_pred             CCCEECCCHHCCCHHHHHHHHHC-CCEEEEEECC----------------CH----HHHHHHHHCCCCEEEECCHHHHHH
T ss_conf             54121320300469999999987-9999998089----------------99----999999985999999794999999


Q ss_pred             HHHC
Q ss_conf             9850
Q gi|255764463|r  333 ILTH  336 (337)
Q Consensus       333 ~L~~  336 (337)
                      +|++
T Consensus       247 ~l~~  250 (252)
T 2pz0_A          247 LVRK  250 (252)
T ss_dssp             HHC-
T ss_pred             HHHH
T ss_conf             9985


No 225
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, cytoplasm, thiolase fold; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=24.97  E-value=14  Score=16.84  Aligned_cols=58  Identities=26%  Similarity=0.328  Sum_probs=38.4

Q ss_pred             HCCCCCCCCCCC----CCCHHHHHHHHHHHH----HHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCC
Q ss_conf             011431001365----446289999999999----9999628973524667677999999999877885
Q gi|255764463|r  136 TIHGHDGILCDG----EIVNDETIELISHAA----VIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHI  196 (337)
Q Consensus       136 T~hGHcGi~~~g----~IdND~Tl~~L~k~A----l~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~  196 (337)
                      .+-|+|.-+.||    .|-..+..+.+...-    +.++.+|+|   |..|.-|-+.+++++|+.+|..
T Consensus       241 ~T~~n~s~~sDGAAAvvl~S~~~a~~~g~~p~a~i~~~~~~~~d---p~~~~~~p~~A~~~al~~agl~  306 (392)
T 2vu1_A          241 VTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGVD---PKVMGTGPIPASRKALERAGWK  306 (392)
T ss_dssp             CCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEECC---GGGGGGTHHHHHHHHHHHHTCC
T ss_pred             EECCCCCCCCCCCEEEEEECHHHHHHCCCCCEEEEEEEEEEECC---HHHHCCCHHHHHHHHHHHHCCC
T ss_conf             65466577677742899944999997699850999989998628---3650643999999999984989


No 226
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=24.94  E-value=33  Score=14.37  Aligned_cols=59  Identities=19%  Similarity=0.187  Sum_probs=31.2

Q ss_pred             HHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHCCCCEEECC
Q ss_conf             999999997301447986133271001143100136-544628999999999999996289735246
Q gi|255764463|r  111 NEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCD-GEIVNDETIELISHAAVIQADAGADIIAPS  176 (337)
Q Consensus       111 ~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~-g~IdND~Tl~~L~k~Al~~A~AGaDivAPS  176 (337)
                      .+.|++.++.=.|++|+-..|+.+|..    ..+.+ ..-..+++++.|.+.|.   +.|..+|..|
T Consensus        25 ~~~i~~A~~~gadlvvfPE~~l~gy~~----~~~~~~~~~~~~~~~~~l~~~A~---~~~i~iv~G~   84 (276)
T 2w1v_A           25 CSLVREAAKQGANIVSLPECFNSPYGT----TYFPDYAEKIPGESTQKLSEVAK---ESSIYLIGGS   84 (276)
T ss_dssp             HHHHHHHHHTTCSEEECCTTTTSCCST----TTHHHHCBCSSSHHHHHHHHHHH---HHTSEEECCC
T ss_pred             HHHHHHHHHCCCEEEECCCCCCCCCCH----HHHHHHHHHCCCHHHHHHHHHHH---HCCCEEEEEE
T ss_conf             999999998839699988786468987----89998777678999999999998---6698799965


No 227
>2wmm_A Chromosome partition protein MUKB; cell division, DNA condensation, nucleotide-binding, cell cycle, coiled coil, ATP-binding, DNA-binding, SMC; 2.30A {Escherichia coli}
Probab=24.91  E-value=20  Score=15.80  Aligned_cols=44  Identities=30%  Similarity=0.451  Sum_probs=29.5

Q ss_pred             ECCCCCCCHHHHHHHHHH----HCCCCCCCEECHHHHHHHHHHCCHHHHH
Q ss_conf             246676779999999998----7788577300336664354301016753
Q gi|255764463|r  174 APSEMMDGRVQEIRKKLD----SHGHINVGIMPYVAKFNSSFYGPYRDAI  219 (337)
Q Consensus       174 APSdMMDGrV~aIR~~Ld----~~g~~~~~ImsYsaKfaS~fYgPFRdA~  219 (337)
                      .|..--|-|..++-+-+.    .+-|.+|.|=  -|-|-|+.|||-|.|.
T Consensus        23 q~~g~~d~rL~~LAer~GGvlLseiYdDI~ie--DApYfsAlyGpar~AI   70 (162)
T 2wmm_A           23 QPGGSEDQRLNALAERFGGVLLSEIYDDVSLE--DAPYFSALYGPSRHAI   70 (162)
T ss_dssp             CSCCCCCTHHHHHHHHHTCEEHHHHGGGCCTT--THHHHHHHTGGGGGCE
T ss_pred             CCCCCCCHHHHHHHHHHCCEEHHHHHCCCCCC--HHHHHHHHHCCCCCEE
T ss_conf             78998779999999984888487652456730--3577998746300025


No 228
>3hht_A NitrIle hydratase alpha subunit; alpha and beta proteins (A+B), lyase; 1.16A {Geobacillus pallidus} PDB: 2dpp_A 1v29_A
Probab=24.70  E-value=22  Score=15.65  Aligned_cols=78  Identities=17%  Similarity=0.157  Sum_probs=40.5

Q ss_pred             HHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf             9999999998778857730033666435430101675310244677774431572114788988887664089879955
Q gi|255764463|r  182 RVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLLVK  260 (337)
Q Consensus       182 rV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVK  260 (337)
                      ||.|+++.|-+.|...-.=+---...-.+=.||..-|-=-+.+- -|-.--|.=..|...|++|.-.+-.+|-+++.|.
T Consensus        28 rv~ALe~LLieKGlit~~~id~~ie~~e~~vgP~~GArvVARAW-~Dp~Fk~rLL~D~~aA~~e~g~~g~~~~~l~vve  105 (216)
T 3hht_A           28 RAKALESLLIEKGHLSSDAIERVIKHYEHELGPMNGAKVVAKAW-TDPAFKQRLLEDSETVLRELGYYGLQGEHIRVVE  105 (216)
T ss_dssp             HHHHHHHHHHHTTSCCHHHHHHHHHHHHTTCCTHHHHHHHHHHH-HCHHHHHHHHHCHHHHHHHHTCCSTTCSSEEEEE
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH-CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
T ss_conf             99999999998599999999999999876349852267889875-8999999999778999998499888867089981


No 229
>1hx0_A Alpha amylase (PPA); inhibitor, carbohydrate, pancreas, hydrolase; HET: GLC AC1 BGC MAL; 1.38A {Sus scrofa} SCOP: b.71.1.1 c.1.8.1 PDB: 1wo2_A* 1ua3_A* 1kxq_A 1kxt_A 1kxv_A 1jfh_A* 1vah_A* 1ppi_A* 3l2m_A* 3l2l_A* 1dhk_A* 1ose_A* 1pig_A* 1pif_A* 1bvn_P 3ij8_A* 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* ...
Probab=24.62  E-value=34  Score=14.33  Aligned_cols=71  Identities=8%  Similarity=0.101  Sum_probs=41.6

Q ss_pred             CCCCCHHHHHHHHHH-HHHCCCCEEEEEECCCCCCCCCCCC---CCCCCC--------CH---HHHHHHHHHHHHCCCEE
Q ss_conf             632889999999999-9988893676330256334554454---215765--------37---99999999973014479
Q gi|255764463|r   62 VMRMSIDVAVEKIKQ-VADLGIPAIAIFPNIPMDLRNNTGS---HIIDPD--------NL---INEGICAIKKNIPNIGI  126 (337)
Q Consensus        62 v~R~Sid~L~~eie~-~~~lGI~av~LFp~I~~~~Kd~~Gs---eA~n~d--------gl---v~rAIr~IK~~fpdl~v  126 (337)
                      -|-|+-..+.+++.+ +.++|+.+|=|.|+...-.-...+.   +.|.+-        |-   ..+.|.+.++.  .|.|
T Consensus        16 ~f~w~~~~i~~~~~~yl~~lG~taIwi~P~~e~~~~~~~~~~~~~gY~~~dy~v~~r~Gt~~dfk~LV~~aH~~--GI~V   93 (496)
T 1hx0_A           16 LFEWRWVDIALECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSYKLCTRSGNENEFRDMVTRCNNV--GVRI   93 (496)
T ss_dssp             ETTCCHHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHT--TCEE
T ss_pred             EEECCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHC--CCEE
T ss_conf             43077799999999999971998899394804765688999864002565764689999999999999999987--9989


Q ss_pred             EECCCCCH
Q ss_conf             86133271
Q gi|255764463|r  127 ITDVALDP  134 (337)
Q Consensus       127 i~DVcLc~  134 (337)
                      |.|+-+=.
T Consensus        94 IlDvV~NH  101 (496)
T 1hx0_A           94 YVDAVINH  101 (496)
T ss_dssp             EEEECCSE
T ss_pred             EEEECCCC
T ss_conf             98465687


No 230
>3agp_A Elongation factor TS, elongation factor TU, linke replicase; RNA polymerase, translation, transferase; 2.80A {Escherichia coli O157} PDB: 3agq_A
Probab=24.43  E-value=22  Score=15.55  Aligned_cols=16  Identities=31%  Similarity=0.586  Sum_probs=8.2

Q ss_pred             HHHHHHHCCCCEEEEE
Q ss_conf             9999998889367633
Q gi|255764463|r   73 KIKQVADLGIPAIAIF   88 (337)
Q Consensus        73 eie~~~~lGI~av~LF   88 (337)
                      .+.-+..+||+.++++
T Consensus       403 HL~La~lLGVk~IIVa  418 (1289)
T 3agp_A          403 HILLGRQVGVPYIIVF  418 (1289)
T ss_dssp             HHHHHHHHTCSEEEEE
T ss_pred             HHHHHHHHCCCCEEEE
T ss_conf             9999998499978999


No 231
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionine MAD, decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=24.41  E-value=34  Score=14.30  Aligned_cols=131  Identities=12%  Similarity=0.201  Sum_probs=54.7

Q ss_pred             HHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHH
Q ss_conf             99999973014479861332710011431001365446289999999999999962897352466767799999999987
Q gi|255764463|r  113 GICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEMMDGRVQEIRKKLDS  192 (337)
Q Consensus       113 AIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~  192 (337)
                      .|+.|.+.  .|-|+.-+-|-|-+.|---|.-..|+  +.+.-..|-+.|..+-+|||..|--..+-.---+.|.+.   
T Consensus       122 ~I~~L~~~--GIPV~gHiGLtPQ~~~~~GG~k~qGk--t~~ea~~l~~dA~~le~AGaf~ivlE~Vp~~la~~It~~---  194 (264)
T 1m3u_A          122 TVQMLTER--AVPVCGHLGLTPQSVNIFGGYKVQGR--GDEAGDQLLSDALALEAAGAQLLVLECVPVELAKRITEA---  194 (264)
T ss_dssp             HHHHHHHT--TCCEEEEEESCGGGHHHHTSSCCCCC--SHHHHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHH---
T ss_pred             HHHHHHHC--CCEEEEECCCCCHHHHHCCCCEECCC--CHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHCC---
T ss_conf             99999987--98687632787222011488401474--779999999999999973304677531758899998626---


Q ss_pred             CCCCCCCEECH-HHHHHHHHHCCHHHHHHCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf             78857730033-66643543010167531024467-777443157211478898888766408
Q gi|255764463|r  193 HGHINVGIMPY-VAKFNSSFYGPYRDAISTRDLLK-GDKKTYYLDPANVQEAIREASIDIQES  253 (337)
Q Consensus       193 ~g~~~~~ImsY-saKfaS~fYgPFRdA~~S~p~~~-gdr~sYQmd~~n~~eA~~e~~~D~~EG  253 (337)
                         .++++.+- |.++++.=+==+-|.+|-.+.+. .=-|.|----....+|+.+-..|+..|
T Consensus       195 ---l~IPtIGIGAG~~cDGQvLV~~DlLG~~~~~~Pkf~k~y~~~~~~~~~A~~~y~~dV~~g  254 (264)
T 1m3u_A          195 ---LAIPVIGIGAGNVTDGQILVMHDAFGITGGHIPKFAKNFLAETGDIRAAVRQYMAEVESG  254 (264)
T ss_dssp             ---CSSCEEEESSCTTSSEEEECHHHHTTCSCSSCCTTCCCSSTTTSSHHHHHHHHHHHHHHT
T ss_pred             ---CCCEEEEECCCCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             ---774189725899875798858865288989898389988613889999999999999659


No 232
>3a8g_A NitrIle hydratase subunit alpha; Fe, iron, lyase, metal-binding, oxidation; 1.11A {Rhodococcus erythropolis} PDB: 3a8h_A 3a8l_A 3a8o_A 2zpb_A 2ahj_A 2cyz_A 2cz6_A 2cz7_A 2d0q_A 2cz1_A 2zpe_A 2zpf_A 2zpg_A 2zph_A 2zpi_A 2qdy_A 3a8m_A 2zcf_A 1ahj_A 2cz0_A*
Probab=24.33  E-value=19  Score=16.04  Aligned_cols=81  Identities=16%  Similarity=0.096  Sum_probs=47.3

Q ss_pred             CCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             67799999999987788577300336664354301016753102446777744315721147889888876640898799
Q gi|255764463|r  179 MDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLL  258 (337)
Q Consensus       179 MDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lM  258 (337)
                      +..||+|+...|.+.|+.+-.-+---..+-.+-.||..-|-=-+.+- -|-.--|-=.+|...|++|.-.+..+|-+++.
T Consensus        19 ~~~rv~Ale~lL~eKGli~~~~~d~~i~~~~~~~gP~~GArvVArAW-~Dp~FK~rLL~D~~aAi~elG~~g~qg~~l~V   97 (207)
T 3a8g_A           19 VSDRAWALFRALDGKGLVPDGYVEGWKKTFEEDFSPRRGAELVARAW-TDPEFRQLLLTDGTAAVAQYGYLGPQGEYIVA   97 (207)
T ss_dssp             HHHHHHHHHHHHHTTTCSCTTHHHHHHHHHHHTSCHHHHHHHHHHHH-HCHHHHHHHHHCHHHHHHHTTCCBTTBSEEEE
T ss_pred             HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH-CCHHHHHHHHHCHHHHHHHCCCCCCCCCEEEE
T ss_conf             78999999999998699999999999999976338741168999985-89899999998899999984988888753899


Q ss_pred             EC
Q ss_conf             55
Q gi|255764463|r  259 VK  260 (337)
Q Consensus       259 VK  260 (337)
                      |.
T Consensus        98 VE   99 (207)
T 3a8g_A           98 VE   99 (207)
T ss_dssp             EE
T ss_pred             EE
T ss_conf             93


No 233
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=24.26  E-value=34  Score=14.28  Aligned_cols=112  Identities=17%  Similarity=0.187  Sum_probs=64.1

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCH--------HHHHHHHHHHHH-C-CCEEEECCCCCHH
Q ss_conf             89999999999998889367633025633455445421576537--------999999999730-1-4479861332710
Q gi|255764463|r   66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNL--------INEGICAIKKNI-P-NIGIITDVALDPF  135 (337)
Q Consensus        66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dgl--------v~rAIr~IK~~f-p-dl~vi~DVcLc~Y  135 (337)
                      ....+.+.+..+.+|||++|-|-|+-+.....   ...|++-++        -....+.+-++. . .|.||-||-+-..
T Consensus       152 ~~~gi~~kLdyLk~LGvt~I~L~Pi~~~~~~~---~~GY~~~d~~~~d~~~Gt~~dfk~LV~~aH~~GI~VilDvV~NH~  228 (618)
T 3m07_A          152 TFRAAIAKLPYLAELGVTVIEVMPVAQFGGER---GWGYDGVLLYAPHSAYGTPDDFKAFIDAAHGYGLSVVLDIVLNHF  228 (618)
T ss_dssp             SHHHHHTTHHHHHHHTCCEEEECCCEECSSSC---CCSTTCCEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSCC
T ss_pred             CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC---CCCCCCEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCC
T ss_conf             79899986589997599889979865268767---768651014247677899999999999752358799953113666


Q ss_pred             HCCCCCCC-------C---------CCCCCCHHHHHHHHHHHHHHHHH-CCCCEE---ECCCCCCC
Q ss_conf             01143100-------1---------36544628999999999999996-289735---24667677
Q gi|255764463|r  136 TIHGHDGI-------L---------CDGEIVNDETIELISHAAVIQAD-AGADII---APSEMMDG  181 (337)
Q Consensus       136 T~hGHcGi-------~---------~~g~IdND~Tl~~L~k~Al~~A~-AGaDiv---APSdMMDG  181 (337)
                      .. .|...       .         .+=.-+|.+..+.+.+.+.-..+ -|+|-.   +-.-|.++
T Consensus       229 ~~-~~~~~~~~~~~y~~~~~~~~~g~dln~~~p~V~~~i~d~~~~Wl~eygVDGFR~D~~~~l~~~  293 (618)
T 3m07_A          229 GP-EGNYLPLLAPAFFHKERMTPWGNGIAYDVDAVRRYIIEAPLYWLTEYHLDGLRFDAIDQIEDS  293 (618)
T ss_dssp             CS-SSCCHHHHCGGGEEEEEEETTEEEECTTSHHHHHHHHHHHHHHHHHTTCSEEEETTGGGCCCC
T ss_pred             CC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCC
T ss_conf             78-766655568653235566887872245746899989888875565317866999513323543


No 234
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=23.69  E-value=24  Score=15.34  Aligned_cols=26  Identities=15%  Similarity=0.245  Sum_probs=12.5

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEECCH
Q ss_conf             11458999999962499899993461
Q gi|255764463|r  262 GLPYLDVCFRIKEKFGLPTFAYQVSG  287 (337)
Q Consensus       262 a~~yLDii~~~k~~~~~P~~aYqVSG  287 (337)
                      ||.=+++++.+++...+|+...-..+
T Consensus        63 g~dG~e~~~~ir~~~~~PvI~lT~~~   88 (140)
T 3h5i_A           63 GMDGVQTALAIQQISELPVVFLTAHT   88 (140)
T ss_dssp             SCCHHHHHHHHHHHCCCCEEEEESSS
T ss_pred             CCCHHHHHHHHHHCCCCCEEEEECCC
T ss_conf             57899999999856999899998999


No 235
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics; 2.10A {Thermus thermophilus HB8} SCOP: c.61.1.1
Probab=23.67  E-value=35  Score=14.21  Aligned_cols=49  Identities=18%  Similarity=0.361  Sum_probs=28.3

Q ss_pred             HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCH
Q ss_conf             9999999999988893676330256334554454215765379999999997301447986133271
Q gi|255764463|r   68 DVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDP  134 (337)
Q Consensus        68 d~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~  134 (337)
                      .+++..++.+.+.|.+.|.+.-.+..                 +..|+.+.+.|||+-|+|= |+||
T Consensus       137 ~s~~~ai~~Lk~~g~~~I~~v~~ias-----------------~~Gi~~v~~~~P~v~I~ta-~iD~  185 (208)
T 1v9s_A          137 GSASLALSLLKERGATGVKLMAILAA-----------------PEGLERIAKDHPDTEVVVA-AIDE  185 (208)
T ss_dssp             HHHHHHHHHHHHTTCCSCEEEEEEEC-----------------HHHHHHHHHHCTTCEEEEE-EECS
T ss_pred             HHHHHHHHHHHHCCCCCEEEEEEECC-----------------HHHHHHHHHHCCCCEEEEE-EECC
T ss_conf             77999999998659984699999527-----------------8999999987969789999-9678


No 236
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek KEY, C-terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=23.66  E-value=35  Score=14.21  Aligned_cols=120  Identities=14%  Similarity=0.171  Sum_probs=69.8

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC---CCCCC-CH---HHHHHHHHHHHHCCCEEEECCCCCHHHCC
Q ss_conf             8999999999999888936763302563345544542---15765-37---99999999973014479861332710011
Q gi|255764463|r   66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSH---IIDPD-NL---INEGICAIKKNIPNIGIITDVALDPFTIH  138 (337)
Q Consensus        66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~Gse---A~n~d-gl---v~rAIr~IK~~fpdl~vi~DVcLc~YT~h  138 (337)
                      ....+.+.+..+.+|||++|-|-|+.+.. ++..|-.   +.||. |=   .-.-|++++++  .|.||.|+-+-     
T Consensus        34 d~~g~~~kLdyl~~LGv~~i~l~Pi~~~~-~~~y~~~dy~~vd~~~Gt~~dfk~lV~~aH~~--gi~VilDvV~N-----  105 (424)
T 2dh2_A           34 NLAGLKGRLDYLSSLKVKGLVLGPIHKNQ-KDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKK--SIRVILDLTPN-----  105 (424)
T ss_dssp             SHHHHHTTHHHHHHTTCSEEEECCCEEEC-TTCSTTEEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEECCTT-----
T ss_pred             CHHHHHHHHHHHHHCCCCEEEECCCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEEEEEEC-----
T ss_conf             99999985179987599989989987288-89988768742185569999999999999862--88899988001-----


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCC--CC---CHHHHHHHHHHHCC
Q ss_conf             4310013654462899999999999999628973524667--67---79999999998778
Q gi|255764463|r  139 GHDGILCDGEIVNDETIELISHAAVIQADAGADIIAPSEM--MD---GRVQEIRKKLDSHG  194 (337)
Q Consensus       139 GHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdM--MD---GrV~aIR~~Ld~~g  194 (337)
                       |+|--.-....+...-+.......-..+-|+|..=...+  +.   .-+..+|+.+++-+
T Consensus       106 -Ht~~~~w~~~~~~~~~~~~~d~~~~~~~~giDGfR~D~~~~l~~~~~~~~~~~~~~~~~~  165 (424)
T 2dh2_A          106 -YRGENSWFSTQVDTVATKVKDALEFWLQAGVDGFQVRDIENLKDASSFLAEWQNITKGFS  165 (424)
T ss_dssp             -TTSSSTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEECCGGGSTTHHHHHHHHHHHHHHHC
T ss_pred             -CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHC
T ss_conf             -367776311212223310123766511268874002201111121578999999887208


No 237
>3i6e_A Muconate cycloisomerase I; structural GENOMICS,NYSGXRC,TARGER 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=23.55  E-value=35  Score=14.19  Aligned_cols=48  Identities=17%  Similarity=0.094  Sum_probs=28.1

Q ss_pred             CCCCEEEECCC----HHHHHHHHHHHHHCCCCEEEEECC----HHHHHHHHHHHCC
Q ss_conf             08987995531----145899999996249989999346----1899999999888
Q gi|255764463|r  252 ESADMLLVKPG----LPYLDVCFRIKEKFGLPTFAYQVS----GEYAMIKAASLQG  299 (337)
Q Consensus       252 EGAD~lMVKPa----~~yLDii~~~k~~~~~P~~aYqVS----GEYami~~a~~~g  299 (337)
                      ..+|++.+||.    ++=.=-|..+.+..++++..-+..    |-.++++.++...
T Consensus       265 ~~~d~v~~d~~~~GGit~~~ki~~~A~~~gi~~~~~~~~~~~i~~~a~~hlaaa~~  320 (385)
T 3i6e_A          265 GICDGVSIKIMKSGGLTRAQTVARIAAAHGLMAYGGDMFEAGLAHLAGTHMIAATP  320 (385)
T ss_dssp             TCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCSCCHHHHHHHHHHHHTCT
T ss_pred             HCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCC
T ss_conf             11444224645578889999999999986990887685305999999999998688


No 238
>1ugp_A NitrIle hydratase alpha subunit; complex, N-butyric acid, non-corrin cobalt, hydration, lyase; HET: BUA; 1.63A {Pseudonocardia thermophila} SCOP: d.149.1.1 PDB: 1ire_A 1ugr_A 1ugq_A 1ugs_A
Probab=23.26  E-value=15  Score=16.79  Aligned_cols=73  Identities=23%  Similarity=0.232  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCC-----CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
Q ss_conf             99999999987788577300336664354301016753102-----4467777443157211478898888766408987
Q gi|255764463|r  182 RVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTR-----DLLKGDKKTYYLDPANVQEAIREASIDIQESADM  256 (337)
Q Consensus       182 rV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~-----p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~  256 (337)
                      ||+|+++.|-+.|+....=+---...-.+=.||..-|-=-+     |.|+      +-=..|...|++|.-.+..+|..+
T Consensus        19 Rv~Ale~lLieKGli~~~~i~~~ie~~~~~vgP~~GArvVArAW~Dp~Fk------~~Ll~D~~~A~~e~G~~~~~~~~l   92 (203)
T 1ugp_A           19 RVKALESMLIEQGILTTSMIDRMAEIYENEVGPHLGAKVVVKAWTDPEFK------KRLLADGTEACKELGIGGLQGEDM   92 (203)
T ss_dssp             HHHHHHHHHHHTTSCCHHHHHHHHHHHHHTSSHHHHHHHHHHHHHCHHHH------HHHHHCHHHHHHTTTCCCTTCSEE
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHH------HHHHHCHHHHHHHCCCCCCCCCCE
T ss_conf             99999999998599999999999999864349865311356864898999------999988899999859988877737


Q ss_pred             EEEC
Q ss_conf             9955
Q gi|255764463|r  257 LLVK  260 (337)
Q Consensus       257 lMVK  260 (337)
                      +.|.
T Consensus        93 ~vve   96 (203)
T 1ugp_A           93 MWVE   96 (203)
T ss_dssp             EEEE
T ss_pred             EEEE
T ss_conf             9994


No 239
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=23.11  E-value=36  Score=14.14  Aligned_cols=13  Identities=54%  Similarity=0.567  Sum_probs=5.8

Q ss_pred             HHHHHHHCCCCEE
Q ss_conf             9999996289735
Q gi|255764463|r  161 AAVIQADAGADII  173 (337)
Q Consensus       161 ~Al~~A~AGaDiv  173 (337)
                      +|..+++||||.|
T Consensus       297 ~a~~L~~~gad~i  309 (503)
T 1me8_A          297 GFRYLADAGADFI  309 (503)
T ss_dssp             HHHHHHHHTCSEE
T ss_pred             HHHHHHHHCCCEE
T ss_conf             9999998187868


No 240
>3l12_A Putative glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=23.04  E-value=36  Score=14.13  Aligned_cols=65  Identities=18%  Similarity=0.247  Sum_probs=46.2

Q ss_pred             HCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHH
Q ss_conf             40898799553114589999999624998999934618999999998889788999999999997726999982018999
Q gi|255764463|r  251 QESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEA  330 (337)
Q Consensus       251 ~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~  330 (337)
                      .-|++.+....-...-..|+.+++ .+++|.+|-|--+                    |.+.-+.+.|+|.|||=+---+
T Consensus       243 ~~~~~~~~~~~~~~~~~~v~~~~~-~G~~V~~wTVn~~--------------------~~~~~l~~~GVdgIiTD~P~~~  301 (313)
T 3l12_A          243 SAGGQLWCPYFLDVTPELVAEAHD-LGLIVLTWTVNEP--------------------EDIRRMATTGVDGIVTDYPGRT  301 (313)
T ss_dssp             HHTCSEEEEBGGGCCHHHHHHHHH-TTCEEEEBCCCSH--------------------HHHHHHHHHTCSEEEESCHHHH
T ss_pred             HCCCCCCCCCHHCCCHHHHHHHHH-CCCEEEEECCCCH--------------------HHHHHHHHCCCCEEEECCHHHH
T ss_conf             517732144241089999999998-7998999889999--------------------9999998659999997949999


Q ss_pred             HHHHHC
Q ss_conf             999850
Q gi|255764463|r  331 ARILTH  336 (337)
Q Consensus       331 a~~L~~  336 (337)
                      .++|++
T Consensus       302 ~~~l~~  307 (313)
T 3l12_A          302 QRILID  307 (313)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
T ss_conf             999997


No 241
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=22.93  E-value=36  Score=14.11  Aligned_cols=71  Identities=15%  Similarity=0.193  Sum_probs=40.6

Q ss_pred             CCCC-CC-CHHHHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf             4315-72-11478898888766408987995---53114589999999624-99899993461899999999888978
Q gi|255764463|r  231 TYYL-DP-ANVQEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN  302 (337)
Q Consensus       231 sYQm-d~-~n~~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d  302 (337)
                      .|+. +. .|..||+.... .....-|++..   =|.+-=+++++.+|+.. +.|+..+...++-.+...+-+.|..+
T Consensus        60 g~~vv~~a~~g~eAl~~~~-~~~p~~dlvilD~~mP~~dG~e~~~~ir~~~~~~piI~lT~~~~~~~~~~a~~~Ga~~  136 (157)
T 3hzh_A           60 GFNIIDTAADGEEAVIKYK-NHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCLIKGAKT  136 (157)
T ss_dssp             TCEEEEEESSHHHHHHHHH-HHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHHTTCSE
T ss_pred             CCEEEEEECCHHHHHHHHH-HCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCE
T ss_conf             9989999899999999998-4198918999856899997899999999719999768763279999999999859988


No 242
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structure initiative; 1.80A {Bacteroides fragilis YCH46}
Probab=22.88  E-value=36  Score=14.11  Aligned_cols=71  Identities=13%  Similarity=0.156  Sum_probs=47.0

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEC--------CCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCC
Q ss_conf             4431572114788988887664089879955--------3114589999999624-998999934618999999998889
Q gi|255764463|r  230 KTYYLDPANVQEAIREASIDIQESADMLLVK--------PGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGW  300 (337)
Q Consensus       230 ~sYQmd~~n~~eA~~e~~~D~~EGAD~lMVK--------Pa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~  300 (337)
                      ..|+...++..+...+...  ++--|.+++-        +|+.-+++++.+|+.. .+|+...--.++......|-+.|.
T Consensus        26 ~g~~v~~a~~~~~al~~l~--~~~~dlillDl~mP~~~~~G~dGl~~l~~ir~~~~~ipvI~lT~~~~~~~~~~a~~~Ga  103 (140)
T 2qr3_A           26 HFSKVITLSSPVSLSTVLR--EENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYADIDLAVRGIKEGA  103 (140)
T ss_dssp             TSSEEEEECCHHHHHHHHH--HSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHHHTTC
T ss_pred             CCCEEEEECCHHHHHHHHH--HCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC
T ss_conf             8999999899999999997--27999999916887777677519999999998689982899978999999999998699


Q ss_pred             CC
Q ss_conf             78
Q gi|255764463|r  301 IN  302 (337)
Q Consensus       301 ~d  302 (337)
                      .|
T Consensus       104 ~d  105 (140)
T 2qr3_A          104 SD  105 (140)
T ss_dssp             CE
T ss_pred             CE
T ss_conf             78


No 243
>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A*
Probab=22.80  E-value=36  Score=14.10  Aligned_cols=73  Identities=11%  Similarity=0.023  Sum_probs=46.9

Q ss_pred             CCCCCCCCCHHHHHHHHCCC-CCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             58563128988999863477-888773311666758988110488878632889999999999998889367633
Q gi|255764463|r   15 RRMRRNRKSNWIREMVREHR-LSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIF   88 (337)
Q Consensus        15 ~R~RRlR~~~~iR~Lv~Et~-Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LF   88 (337)
                      +|==|++-|+++-.-+.... +.....|.|+||-|..-...+- .=+-..+|=.+.|.+.-+++.++|++-+++.
T Consensus        36 RrDLRl~DN~AL~~A~~~a~~~~~~~~V~pvfi~dp~~~~~~~-~~~~r~~Fl~esL~~L~~~L~~lg~~L~v~~  109 (543)
T 2wq7_A           36 RKGLRLHDNPALSHIFTAANAAPGRYFVRPIFILDPGILDWMQ-VGANRWRFLQQTLEDLDNQLRKLNSRLFVVR  109 (543)
T ss_dssp             SSCCCSTTCHHHHHHHHHHHHSTTTEEEEEEEEECTTGGGCTT-SCHHHHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             9995363549999999860201589729999998915435799-7899999999999999999997799779997


No 244
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=22.72  E-value=37  Score=14.09  Aligned_cols=123  Identities=19%  Similarity=0.239  Sum_probs=73.4

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCH------------HHHHHHHHHHHHCCCEEEECCCCC
Q ss_conf             89999999999998889367633025633455445421576537------------999999999730144798613327
Q gi|255764463|r   66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNL------------INEGICAIKKNIPNIGIITDVALD  133 (337)
Q Consensus        66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dgl------------v~rAIr~IK~~fpdl~vi~DVcLc  133 (337)
                      +...+.+.+..+.+|||++|-|-|+-+....   ....|++-++            ..+.|.++.++  .|.||-||-+-
T Consensus       142 ~~~g~~~~Ldylk~LGvt~v~L~Pv~~~~~~---~~wGY~~~~y~a~~~~~G~~~efk~lV~~~H~~--Gi~VilDvV~N  216 (602)
T 2bhu_A          142 TYRAAAEKLPYLKELGVTAIQVMPLAAFDGQ---RGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRL--GLGVFLDVVYN  216 (602)
T ss_dssp             SHHHHHHTHHHHHHHTCCEEEECCCEECSSS---CCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEECCS
T ss_pred             CHHHHHHHHHHHHHCCCCEEEECCCCCCCCC---CCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCC--CCEEECCCCCC
T ss_conf             8878876335797769749998986647666---888876414565788899999999999984616--81896144567


Q ss_pred             HHHCC-----------------CCCCCCCCCCCCHHHHHHHHHHHHHHHHH-CCCCEE---ECCCCCC----CHHHHHHH
Q ss_conf             10011-----------------43100136544628999999999999996-289735---2466767----79999999
Q gi|255764463|r  134 PFTIH-----------------GHDGILCDGEIVNDETIELISHAAVIQAD-AGADII---APSEMMD----GRVQEIRK  188 (337)
Q Consensus       134 ~YT~h-----------------GHcGi~~~g~IdND~Tl~~L~k~Al~~A~-AGaDiv---APSdMMD----GrV~aIR~  188 (337)
                      .....                 ..||-  +-...|.++.+.+...+.-.++ -|+|-.   +-+-|.+    .-...+++
T Consensus       217 H~~~~~~~~~~~~~~~~~~~~~~~~g~--~ln~~~~~vr~~i~d~~~~W~~e~gvDGfR~D~~~~l~~~~~~~~~~~l~~  294 (602)
T 2bhu_A          217 HFGPSGNYLSSYAPSYFTDRFSSAWGM--GLDYAEPHMRRYVTGNARMWLRDYHFDGLRLDATPYMTDDSETHILTELAQ  294 (602)
T ss_dssp             CCCSSSCCHHHHCGGGEEEEEECSSSE--EECTTSHHHHHHHHHHHHHHHHHHCCSEEEETTGGGCCCCSSSCHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHEEEEECCCEEEECCHHHCCCCCCCCHHHHHHH
T ss_conf             688877644457875334566668788--627588899999987774014610454798625653204421101567889


Q ss_pred             HHHHCCC
Q ss_conf             9987788
Q gi|255764463|r  189 KLDSHGH  195 (337)
Q Consensus       189 ~Ld~~g~  195 (337)
                      .+++.+-
T Consensus       295 ~i~~~~~  301 (602)
T 2bhu_A          295 EIHELGG  301 (602)
T ss_dssp             HHHTTCS
T ss_pred             HHHHHCC
T ss_conf             8875278


No 245
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=22.64  E-value=37  Score=14.07  Aligned_cols=52  Identities=13%  Similarity=0.105  Sum_probs=25.3

Q ss_pred             HHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             99999999730144798613327100114310013654462899999999999999
Q gi|255764463|r  111 NEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQA  166 (337)
Q Consensus       111 ~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A  166 (337)
                      .+.++.+-.++|++.|+..   -|...|=+- +++|....+++=...+.+++-..+
T Consensus        22 ~~~~~~~~~~~pnl~vl~~---~~~l~~~lT-iLRd~~T~~~~Fr~~~~ri~~lL~   73 (243)
T 1bd3_D           22 ESILQDIITRFPNVVLMKQ---TAQLRAMMT-IIRDKETPKEEFVFYADRLIRLLI   73 (243)
T ss_dssp             HHHHHHHHHHCTTEEECCC---CHHHHHHHH-HHHCTTCCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHCCCEEEECC---CHHHHHHHH-HHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf             1467767740898799389---989999999-976789987999999999999999


No 246
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=22.62  E-value=37  Score=14.07  Aligned_cols=52  Identities=13%  Similarity=0.207  Sum_probs=29.1

Q ss_pred             HHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECH
Q ss_conf             87664089879955311458999999962499899993461899999999888978899999999999772699998201
Q gi|255764463|r  247 SIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYF  326 (337)
Q Consensus       247 ~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~  326 (337)
                      ..+..+|||+|+.--..                     ...+   ...|.+.|....+    |...-.+++|+.-+|-++
T Consensus       220 l~~~~~~~d~LIhE~t~---------------------~~~~---~~~a~~~~Hst~~----~a~~~a~~~~~k~lvLtH  271 (306)
T 2cbn_A          220 ALDLAKGVDVMVHEATL---------------------DITM---EAKANSRGHSSTR----QAATLAREAGVGKLIITH  271 (306)
T ss_dssp             HHHHHTTCSEEEEECCB---------------------CGGG---HHHHHHTTCCBHH----HHHHHHHHHTCSEEEEEC
T ss_pred             HHHHHCCCCEEEEECCC---------------------CHHH---HHCCCCCCCCCHH----HHHHHHHHCCCCEEEEEC
T ss_conf             65543156457773333---------------------5244---5154678999999----999999984999899989


No 247
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixation regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=21.92  E-value=38  Score=13.98  Aligned_cols=69  Identities=12%  Similarity=0.195  Sum_probs=46.2

Q ss_pred             CCCCCCCHH-HHHHHHHHHHHHCCCCEEEE---CCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf             431572114-78898888766408987995---53114589999999624-99899993461899999999888978
Q gi|255764463|r  231 TYYLDPANV-QEAIREASIDIQESADMLLV---KPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN  302 (337)
Q Consensus       231 sYQmd~~n~-~eA~~e~~~D~~EGAD~lMV---KPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d  302 (337)
                      .||...++. .+|+....   ++--|++.+   =|+|.=+++++.+|+.. ..|+...-..++-.....|.+.|..|
T Consensus        27 g~~v~~a~~~~~al~~~~---~~~~dlvi~D~~mP~~~G~~ll~~ir~~~~~~pvI~lT~~~~~~~~~~a~~~Ga~d  100 (126)
T 1dbw_A           27 GFAVKMHQSAEAFLAFAP---DVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGDVPMAVEAMKAGAVD  100 (126)
T ss_dssp             TCEEEEESCHHHHHHHGG---GCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHHTTCSE
T ss_pred             CCEEEEECCHHHHHHHHH---HCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCE
T ss_conf             999999899999999976---37998797103688888299999999619998399996889999999999879988


No 248
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=21.32  E-value=39  Score=13.90  Aligned_cols=33  Identities=12%  Similarity=0.078  Sum_probs=22.5

Q ss_pred             CCCCCCCCHH---HHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf             8786328899---999999999988893676330256
Q gi|255764463|r   59 MPDVMRMSID---VAVEKIKQVADLGIPAIAIFPNIP   92 (337)
Q Consensus        59 MPGv~R~Sid---~L~~eie~~~~lGI~av~LFp~I~   92 (337)
                      -.|-|-|+-+   ...+.++.+.++|...| .|+...
T Consensus        64 r~g~F~y~~~e~~~m~~dI~~~~~~Gadgi-VfG~L~   99 (224)
T 2bdq_A           64 RGGNFVYNDLELRIMEEDILRAVELESDAL-VLGILT   99 (224)
T ss_dssp             SSSCSCCCHHHHHHHHHHHHHHHHTTCSEE-EECCBC
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCE-EEEEEC
T ss_conf             899867688999999999999998199802-798776


No 249
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} PDB: 3o6d_A*
Probab=21.25  E-value=39  Score=13.89  Aligned_cols=143  Identities=15%  Similarity=0.098  Sum_probs=60.3

Q ss_pred             HHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCC---CCCCCCCCCCCC
Q ss_conf             99999996289735246676779999999998778857730033666435430101675310244---677774431572
Q gi|255764463|r  160 HAAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDL---LKGDKKTYYLDP  236 (337)
Q Consensus       160 k~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~---~~gdr~sYQmd~  236 (337)
                      ..--.+-++|.   --|=-||--...|..+.+- |..  .|==|..+||.+|...+.....++-+   +..+++.++-.+
T Consensus       115 ~~i~~lk~~gI---rVSLFIDPd~~~i~~A~~~-Gad--~VElhTG~YA~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (260)
T 3o6c_A          115 QSIEKLQNANI---EVSLFINPSLEDIEKSKIL-KAQ--FIELHTGHYANLHNALFSNISHTAFALKELDQDKKTLQAQF  188 (260)
T ss_dssp             HHHHHHHHTTC---EEEEEECSCHHHHHHHHHT-TCS--EEEECCHHHHHHHHHHHSSGGGSTTCCGGGCSCHHHHHHHH
T ss_pred             HHHHHHHHCCC---EEEEEECCCHHHHHHHHHC-CCC--EEEEECHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             99998653496---2899968998999998427-989--89983456664420332211001333322212245667799


Q ss_pred             CHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf             11478898888766408987995531145899999996249989999346189999999988897889999999999977
Q gi|255764463|r  237 ANVQEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKR  316 (337)
Q Consensus       237 ~n~~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kR  316 (337)
                      ...-+.+.++..-..+=-=-|=---++.|-.+ ..+.   .+|- ...||=-.|.|--|-..|   .++++.+-+..+||
T Consensus       189 ~~el~~i~~aa~~A~~~GL~VnAGHgLn~~Nl-~~l~---~ip~-i~EvsIGHaiI~eAl~~G---l~~aV~~~~~ii~r  260 (260)
T 3o6c_A          189 EKELQNLELCAKKGLELGLKVAAGHGLNYKNV-KPVV---KIKE-ICELNIGQSIVARSVFTG---LQNAILEMKELIKR  260 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEEEECTTCCTTTT-HHHH---TCTT-CCEEEECHHHHHHHHHHC---HHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHCCCEEECCCCCCHHHH-HHHH---CCCC-CEEEECCHHHHHHHHHHH---HHHHHHHHHHHHCC
T ss_conf             99999999999999876985636899887778-9983---5899-758845699999999973---99999999999659


No 250
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein structure initiative; 2.70A {Polaromonas SP}
Probab=21.16  E-value=39  Score=13.88  Aligned_cols=63  Identities=14%  Similarity=0.144  Sum_probs=37.3

Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEECCCCCHHHC
Q ss_conf             786328899999999999988893676330256334554454215765379999999997301-447986133271001
Q gi|255764463|r   60 PDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIP-NIGIITDVALDPFTI  137 (337)
Q Consensus        60 PGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fp-dl~vi~DVcLc~YT~  137 (337)
                      ....-.+.+.+.++++++.+.|.+++-+-.+.+. .             .=...|+++++.++ ++.++.|. -+.||.
T Consensus       179 ~~~~~~~~e~~~~~~~~~~~~Gf~~~KiKvg~~~-~-------------~D~~~v~~iR~~~g~~~~l~vDa-N~~w~~  242 (428)
T 3bjs_A          179 IALGYQPKESLAEEAQEYIARGYKALKLRIGDAA-R-------------VDIERVRHVRKVLGDEVDILTDA-NTAYTM  242 (428)
T ss_dssp             SCSCSCCHHHHHHHHHHHHHHTCSEEEEECCSCH-H-------------HHHHHHHHHHHHHCTTSEEEEEC-TTCCCH
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCH-H-------------HHHHHHHHHHHHCCCCCEEEEEC-CCCCCH
T ss_conf             3345589999999999998639974896179871-8-------------89999999999719998299988-998656


No 251
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=21.10  E-value=39  Score=13.87  Aligned_cols=21  Identities=24%  Similarity=0.387  Sum_probs=9.9

Q ss_pred             HHHHHHHHHHHH-CCCCEEEEEE
Q ss_conf             999999999998-8893676330
Q gi|255764463|r   68 DVAVEKIKQVAD-LGIPAIAIFP   89 (337)
Q Consensus        68 d~L~~eie~~~~-lGI~av~LFp   89 (337)
                      ..+.+.+++..+ .++. ++++|
T Consensus        22 ~~l~~~~~~~~~~~~~~-i~vap   43 (226)
T 1w0m_A           22 VELAKAAERAARELGVN-IVVAP   43 (226)
T ss_dssp             HHHHHHHHHHHHHHTCE-EEEEC
T ss_pred             HHHHHHHHHHCCCCCCE-EEEEC
T ss_conf             99999998623546988-99989


No 252
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, enolase superfamily, TIM barrel; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=20.94  E-value=40  Score=13.85  Aligned_cols=38  Identities=18%  Similarity=0.160  Sum_probs=19.1

Q ss_pred             HCCCCEEEECCC----HHHHHHHHHHHHHCCCCEEEEECCHHH
Q ss_conf             408987995531----145899999996249989999346189
Q gi|255764463|r  251 QESADMLLVKPG----LPYLDVCFRIKEKFGLPTFAYQVSGEY  289 (337)
Q Consensus       251 ~EGAD~lMVKPa----~~yLDii~~~k~~~~~P~~aYqVSGEY  289 (337)
                      ...+|++++||.    +.-.=-|.++.+..++|+.. +++.+.
T Consensus       279 ~~a~d~v~~d~~~~GGit~~~~ia~~A~~~gi~v~~-h~~~~a  320 (393)
T 2og9_A          279 HRAADYLMPDAPRVGGITPFLKIASLAEHAGLMLAP-HFAMEL  320 (393)
T ss_dssp             TTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEECC-CSCHHH
T ss_pred             CCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEE-CHHHHH
T ss_conf             478765743565568799999999999985998975-649999


No 253
>1xrs_A D-lysine 5,6-aminomutase alpha subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'- deoxyadenosine, radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.1.19.4
Probab=20.85  E-value=40  Score=13.84  Aligned_cols=70  Identities=31%  Similarity=0.423  Sum_probs=44.2

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECC-----CCCC----C--------------HHHHHHHHHHHCCCC-CC
Q ss_conf             0136544628999999999999996289735246-----6767----7--------------999999999877885-77
Q gi|255764463|r  143 ILCDGEIVNDETIELISHAAVIQADAGADIIAPS-----EMMD----G--------------RVQEIRKKLDSHGHI-NV  198 (337)
Q Consensus       143 i~~~g~IdND~Tl~~L~k~Al~~A~AGaDivAPS-----dMMD----G--------------rV~aIR~~Ld~~g~~-~~  198 (337)
                      |+..|.|.-|      ..||..-|..|||+||-=     .-.|    |              ++.+.|++||..+-+ .-
T Consensus       156 IVAtG~i~eD------i~qaraAA~~GAD~IaVIRttgQSllDyvp~GaT~EG~GGt~aTqenfR~mRkALD~v~~EvGR  229 (516)
T 1xrs_A          156 IVATGNIYED------ITQAVAAAKQGADVIAVIRTTGQSLLDYVPYGATTEGFGGTYATQENFRLMREALDKVGAEVGK  229 (516)
T ss_dssp             EECCSCHHHH------HHHHHHHHHTTCSEEEECCCTTGGGCSSCCCSCCSCCTTSCCCCHHHHHHHHHHHHHHHHHHTS
T ss_pred             EEECCCHHHH------HHHHHHHHHCCCCEEEEHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             9833854878------9999999864897898635123555324767898787678400489999999998889998487


Q ss_pred             CEECHHHHHHHHHHCCHHHHHH
Q ss_conf             3003366643543010167531
Q gi|255764463|r  199 GIMPYVAKFNSSFYGPYRDAIS  220 (337)
Q Consensus       199 ~ImsYsaKfaS~fYgPFRdA~~  220 (337)
                      .|-=  .-|+|.+-+|==-+.+
T Consensus       230 yI~~--~nY~SGlcmPEIA~m~  249 (516)
T 1xrs_A          230 YIRL--CNYCSGLCMPEIAAMG  249 (516)
T ss_dssp             CCEE--EEECCSTTHHHHHHHH
T ss_pred             EEEE--ECCCCCCCCHHHHHHH
T ss_conf             1344--1213113439999999


No 254
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei}
Probab=20.80  E-value=40  Score=13.83  Aligned_cols=54  Identities=17%  Similarity=0.319  Sum_probs=32.1

Q ss_pred             HHHHHHHHHHHHCCC--CEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHH-HCCC
Q ss_conf             999999999998889--36763302563345544542157653799999999973014479861332710-0114
Q gi|255764463|r   68 DVAVEKIKQVADLGI--PAIAIFPNIPMDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPF-TIHG  139 (337)
Q Consensus        68 d~L~~eie~~~~lGI--~av~LFp~I~~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~Y-T~hG  139 (337)
                      .+++..++.+.+.|+  +.|.+.-.+...                 .+|+.+.++||++-|+|= |+|+- +++|
T Consensus       143 ~s~~~ai~~L~~~Gv~~~~I~~v~~iaa~-----------------~Gi~~i~~~~P~v~I~ta-~iD~~Ln~~~  199 (217)
T 3dmp_A          143 YSAAHAIDVLKRRGVPGERLMFLALVAAP-----------------EGVQVFQDAHPDVKLYVA-SLDSHLDDHA  199 (217)
T ss_dssp             HHHHHHHHHHHTTTCCGGGEEEECSEECH-----------------HHHHHHHHHCTTCEEEES-EECCEECTTS
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEEEEEECH-----------------HHHHHHHHHCCCCEEEEE-EECCCCCCCC
T ss_conf             57999999999849984528999987547-----------------999999987939789999-7067768997


No 255
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=20.56  E-value=40  Score=13.80  Aligned_cols=123  Identities=14%  Similarity=0.054  Sum_probs=67.7

Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEEECCCCCCC---CCCCCCCCC--------CC-CH---HHHHHHHHHHHHCCCEEEECC
Q ss_conf             8999999999999888936763302563345---544542157--------65-37---999999999730144798613
Q gi|255764463|r   66 SIDVAVEKIKQVADLGIPAIAIFPNIPMDLR---NNTGSHIID--------PD-NL---INEGICAIKKNIPNIGIITDV  130 (337)
Q Consensus        66 Sid~L~~eie~~~~lGI~av~LFp~I~~~~K---d~~GseA~n--------~d-gl---v~rAIr~IK~~fpdl~vi~DV  130 (337)
                      .+..+.+.+..+.+||+++|-|=|+.+....   +..+.+.|+        +. |=   ..+.|++++++  .|-||.|+
T Consensus        41 dl~gi~~kLdylk~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~id~~~Gt~~df~~lv~~~h~~--Gi~VilD~  118 (484)
T 2aaa_A           41 SWQGIIDHLDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHAR--GMYLMVDV  118 (484)
T ss_dssp             CHHHHHHTHHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTT--TCEEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEEEE
T ss_conf             8999998379998689988994987417765677888788867445776184559999999999999647--86899964


Q ss_pred             CCCHH-----------------HC----CCCCCCCC--------------------CCCCCHHHHHHHHHHHHHHHH-HC
Q ss_conf             32710-----------------01----14310013--------------------654462899999999999999-62
Q gi|255764463|r  131 ALDPF-----------------TI----HGHDGILC--------------------DGEIVNDETIELISHAAVIQA-DA  168 (337)
Q Consensus       131 cLc~Y-----------------T~----hGHcGi~~--------------------~g~IdND~Tl~~L~k~Al~~A-~A  168 (337)
                      -+-.-                 ..    |-+|.+..                    |=.-.|.+..+.+.+...-.. +.
T Consensus       119 V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~lpdln~~n~~v~~~~~~~~~~w~~~~  198 (484)
T 2aaa_A          119 VPDHMGYAGNGNDVDYSVFDPFDSSSYFHPYCLITDWDNLTMVEDCWEGDTIVSLPDLDTTETAVRTIWYDWVADLVSNY  198 (484)
T ss_dssp             CCSBCCBSSCGGGCCGGGSBSCCSGGGBCCCCBCCCTTCHHHHHHSBEECSSSEECBBCTTSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf             35665455677645511148866555557667766543346777653467566663103485589999987544004301


Q ss_pred             CCCEE---ECCCCCCCHHHHHHHHH
Q ss_conf             89735---24667677999999999
Q gi|255764463|r  169 GADII---APSEMMDGRVQEIRKKL  190 (337)
Q Consensus       169 GaDiv---APSdMMDGrV~aIR~~L  190 (337)
                      |+|-.   |.-.|=..-...++++-
T Consensus       199 gvDGfR~Daa~~i~~~f~~~~~~~~  223 (484)
T 2aaa_A          199 SVDGLRIDSVLEVQPDFFPGYNKAS  223 (484)
T ss_dssp             TCCEEEESCSTTSCGGGHHHHHHHH
T ss_pred             CCCEEEECCCCCCCHHHHHHHHHCC
T ss_conf             5526886100026588887644245


No 256
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=20.53  E-value=40  Score=13.79  Aligned_cols=85  Identities=13%  Similarity=0.075  Sum_probs=37.6

Q ss_pred             HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCC--HHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCC
Q ss_conf             999999888936763302563345544542157653--799999999973014479861332710011431001365446
Q gi|255764463|r   73 KIKQVADLGIPAIAIFPNIPMDLRNNTGSHIIDPDN--LINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIV  150 (337)
Q Consensus        73 eie~~~~lGI~av~LFp~I~~~~Kd~~GseA~n~dg--lv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~Id  150 (337)
                      .++.+.++|+++|=| |+--...-...+...+|+.+  .+.+.|..+++.  .|.||.|+       |.++|-.+...-+
T Consensus        50 dI~~ik~~GfN~vRi-pisW~~~~~~~~~~~in~~~l~~~d~vId~a~~~--Gi~viLdl-------H~~~~w~~~~~~~  119 (515)
T 3icg_A           50 MINKIKEAGFNTLRL-PVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDN--DMYVIINL-------HHENEWLKPFYAN  119 (515)
T ss_dssp             HHHHHHHHTCCEEEE-CCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTT--TCEEEEEC-------CSCTTTCCCSGGG
T ss_pred             HHHHHHHCCCCEEEE-EEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEC-------CCCCCCCCCCCCC
T ss_conf             999999879988997-0128980788888744999999999999999978--99999967-------7788555688889


Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             28999999999999996
Q gi|255764463|r  151 NDETIELISHAAVIQAD  167 (337)
Q Consensus       151 ND~Tl~~L~k~Al~~A~  167 (337)
                      .+.+.+.+.+.....|+
T Consensus       120 ~~~~~~~~~~~w~~vA~  136 (515)
T 3icg_A          120 EAQVKAQLTKVWTQIAN  136 (515)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHH
T ss_conf             77899999999999999


No 257
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=20.49  E-value=41  Score=13.79  Aligned_cols=139  Identities=16%  Similarity=0.219  Sum_probs=80.9

Q ss_pred             HHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHH---HHHHHHHHHCCCCEEEEEECCCCCCCCCCC
Q ss_conf             88999863477888773311666758988110488878632889999---999999998889367633025633455445
Q gi|255764463|r   24 NWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVA---VEKIKQVADLGIPAIAIFPNIPMDLRNNTG  100 (337)
Q Consensus        24 ~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L---~~eie~~~~lGI~av~LFp~I~~~~Kd~~G  100 (337)
                      ..++...+...       .|++|.=..        =+|-|.||-+++   .+.++.+.++|+..| +||...++. .   
T Consensus        79 gli~~~~~~~~-------iPV~vMIRP--------R~GdF~Ys~~E~~~M~~dI~~~k~~Ga~Gv-VfG~L~~dg-~---  138 (287)
T 3iwp_A           79 GVLQVVKQSVQ-------IPVFVMIRP--------RGGDFLYSDREIEVMKADIRLAKLYGADGL-VFGALTEDG-H---  138 (287)
T ss_dssp             HHHHHHHTTCC-------SCEEEECCS--------SSSCSCCCHHHHHHHHHHHHHHHHTTCSEE-EECCBCTTS-C---
T ss_pred             HHHHHHHHHCC-------CCEEEEECC--------CCCCCCCCHHHHHHHHHHHHHHHHCCCCEE-EEEEECCCC-C---
T ss_conf             99999998679-------975999678--------888888899999999999999998699978-995568999-8---


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCEEEE----CCCCCHH------HCCCCCCCCCCC----CCCHHHHHHHHHHHHHHHH
Q ss_conf             4215765379999999997301447986----1332710------011431001365----4462899999999999999
Q gi|255764463|r  101 SHIIDPDNLINEGICAIKKNIPNIGIIT----DVALDPF------TIHGHDGILCDG----EIVNDETIELISHAAVIQA  166 (337)
Q Consensus       101 seA~n~dglv~rAIr~IK~~fpdl~vi~----DVcLc~Y------T~hGHcGi~~~g----~IdND~Tl~~L~k~Al~~A  166 (337)
                         .|.     .+++.+-+..+.+-+.-    |.|-+|.      -..|-..|+.-|    -.++-+.|..|.++|    
T Consensus       139 ---ID~-----~~~~~Lv~~a~~l~vTFHRAfD~~~d~~~ale~Li~lG~~rILTSGg~~~A~~G~~~L~~Lv~~a----  206 (287)
T 3iwp_A          139 ---IDK-----ELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSSALEGLPLIKRLIEQA----  206 (287)
T ss_dssp             ---BCH-----HHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSSTTTTHHHHHHHHHHH----
T ss_pred             ---CCH-----HHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHC----
T ss_conf             ---499-----99999999828985697400564089999999999739885676888566888689999999973----


Q ss_pred             HCCCCEEECCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf             6289735246676779999999998778857
Q gi|255764463|r  167 DAGADIIAPSEMMDGRVQEIRKKLDSHGHIN  197 (337)
Q Consensus       167 ~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~  197 (337)
                      .-.-.|++=+.--...+..|-   ...|+..
T Consensus       207 ~~~I~Im~GGGV~~~Ni~~l~---~~~G~~e  234 (287)
T 3iwp_A          207 KGRIVVMPGGGITDRNLQRIL---EGSGATE  234 (287)
T ss_dssp             TTSSEEEECTTCCTTTHHHHH---HHHCCSE
T ss_pred             CCCCEEEECCCCCHHHHHHHH---HHCCCCE
T ss_conf             899469856988989999999---9719918


No 258
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=20.43  E-value=41  Score=13.78  Aligned_cols=68  Identities=19%  Similarity=0.229  Sum_probs=48.9

Q ss_pred             CCC-C-CCHHHHHHHHHHHHHHCCCCEEEEC---CCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCC
Q ss_conf             315-7-2114788988887664089879955---3114589999999624-99899993461899999999888978
Q gi|255764463|r  232 YYL-D-PANVQEAIREASIDIQESADMLLVK---PGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWIN  302 (337)
Q Consensus       232 YQm-d-~~n~~eA~~e~~~D~~EGAD~lMVK---Pa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d  302 (337)
                      |+. . ..|..||+....   ++--|++.+-   |++.=+++++++++.. ..|+...-..++......|.+.|..+
T Consensus        27 ~~v~~~a~~g~~al~~~~---~~~~dlii~D~~mP~~~G~e~~~~ir~~~~~~~ii~lt~~~~~~~~~~a~~~Ga~~  100 (120)
T 1tmy_A           27 YEVAGEATNGREAVEKYK---ELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKD  100 (120)
T ss_dssp             CEEEEEESSHHHHHHHHH---HHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTCHHHHHHHHHTTCCE
T ss_pred             CEEEEEECCHHHHHHHHH---HCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCE
T ss_conf             989999899999999998---36999999963689997999999999758799789997428999999999869989


No 259
>1bwv_A Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco/reaction intermediate); HET: KCX CAP; 2.40A {Galdieria partita} SCOP: c.1.14.1 d.58.9.1 PDB: 1iwa_A 1bxn_A
Probab=20.36  E-value=41  Score=13.77  Aligned_cols=192  Identities=12%  Similarity=0.108  Sum_probs=101.9

Q ss_pred             CCCCCHHHHHHHHHHHHHC--CC--EEEECCCCCH-HH------CCCCCCCCC-----CC----CCC---HHHHHHHHHH
Q ss_conf             5765379999999997301--44--7986133271-00------114310013-----65----446---2899999999
Q gi|255764463|r  104 IDPDNLINEGICAIKKNIP--NI--GIITDVALDP-FT------IHGHDGILC-----DG----EIV---NDETIELISH  160 (337)
Q Consensus       104 ~n~dglv~rAIr~IK~~fp--dl--~vi~DVcLc~-YT------~hGHcGi~~-----~g----~Id---ND~Tl~~L~k  160 (337)
                      |.++++.+-....+-+.|.  .+  +-+.|+-|-+ |.      .+|-.|+=+     +.    .|.   --.|-+.+++
T Consensus       117 Fe~gsv~nlltsI~GNvfg~k~l~~lRL~Dl~lP~~~~~~F~GP~fGI~G~R~~lgv~~RPLlgtiiKPklGLsp~~~a~  196 (493)
T 1bwv_A          117 FEEGSIANLTASIIGNVFGFKAVKALRLEDMRLPLAYLKTFQGPATGVILERERLDKFGRPLLGCTTKPKLGLSGKNYGR  196 (493)
T ss_dssp             SCTTCHHHHHHHHTSSGGGCTTEEEEEEEEEECCHHHHTTSCCCSSHHHHHHHHHTCCSSCEEECBCSSSSCCCHHHHHH
T ss_pred             CCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHH
T ss_conf             57774899999996142564214525898861899999628999987445588747888722431247766789899999


Q ss_pred             HHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHH-
Q ss_conf             9999996289735246676779999999998778857730033666435430101675310244677774431572114-
Q gi|255764463|r  161 AAVIQADAGADIIAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANV-  239 (337)
Q Consensus       161 ~Al~~A~AGaDivAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~-  239 (337)
                      ++..++..|.|+|-                |.++..+-+-+.+.-.+.-+     .+|+.-+..-.|-++.|-.|.... 
T Consensus       197 ~~ye~~~GGlDfIK----------------DDE~l~dqpf~p~~eRv~~~-----~eai~~A~~eTG~~k~ya~NiTa~~  255 (493)
T 1bwv_A          197 VVYEALKGGLDFVK----------------DDENINSQPFMRWRERYLFT-----MEAVNKASAATGEVKGHYLNVTAAT  255 (493)
T ss_dssp             HHHHHHHHTCSEEE----------------CCTTCSSBTTBCHHHHHHHH-----HHHHHHHHHHHTSCCEEEEECCCSS
T ss_pred             HHHHHHHCCCCEEE----------------CCCCCCCCCCCCHHHHHHHH-----HHHHHHHHHHHCCEEEEEECCCCCC
T ss_conf             99999726886642----------------67566788788789999999-----9999999997397138983378974


Q ss_pred             -HHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHH---CCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             -788988887664089879955311458999999962---4998999934618999999998889788999999999997
Q gi|255764463|r  240 -QEAIREASIDIQESADMLLVKPGLPYLDVCFRIKEK---FGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFK  315 (337)
Q Consensus       240 -~eA~~e~~~D~~EGAD~lMVKPa~~yLDii~~~k~~---~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~k  315 (337)
                       .|-++....-.+.|+.++|+-. ..=++.++.++..   ..+|+. +|-+|--++-. ....| ++.. ++   ..-.+
T Consensus       256 ~eem~~ra~~a~~~G~~~lm~~~-~~G~~al~~La~~~~~~~l~lH-~HrAg~~~~~r-~~~~G-is~~-vl---~Kl~R  327 (493)
T 1bwv_A          256 MEEMYARANFAKELGSVIIMIDL-VIGYTAIQTMAKWARDNDMILH-LHRAGNSTYSR-QKNHG-MNFR-VI---CKWMR  327 (493)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEEG-GGCHHHHHHHHHHHHHTTCEEE-EECTTTHHHHS-CTTSE-ECHH-HH---HHHHH
T ss_pred             HHHHHHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHHHHCCCEEC-CCCCCCCCCCC-CCCCC-CCHH-HH---HHHHH
T ss_conf             99999999999966976999545-3045999999986443485330-24042641138-88887-0699-99---99999


Q ss_pred             HHCCCEEEE
Q ss_conf             726999982
Q gi|255764463|r  316 RAGCDGIFT  324 (337)
Q Consensus       316 RAGAd~Iit  324 (337)
                      -||||.|++
T Consensus       328 LaGaD~ih~  336 (493)
T 1bwv_A          328 MAGVDHIHA  336 (493)
T ss_dssp             HHTCSEEEC
T ss_pred             HCCCCCCCC
T ss_conf             759870104


No 260
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa PAO1}
Probab=20.03  E-value=41  Score=13.72  Aligned_cols=96  Identities=13%  Similarity=0.156  Sum_probs=43.7

Q ss_pred             HHHHHHHHHCCCCEEEEEECCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHCCCE-EEECCCCCHHHCCCCCCCCCCCC
Q ss_conf             9999999988893676330256334-554454215765379999999997301447-98613327100114310013654
Q gi|255764463|r   71 VEKIKQVADLGIPAIAIFPNIPMDL-RNNTGSHIIDPDNLINEGICAIKKNIPNIG-IITDVALDPFTIHGHDGILCDGE  148 (337)
Q Consensus        71 ~~eie~~~~lGI~av~LFp~I~~~~-Kd~~GseA~n~dglv~rAIr~IK~~fpdl~-vi~DVcLc~YT~hGHcGi~~~g~  148 (337)
                      .+.++.+...|...+.+|..+.+.. +...+......-......++..++....+. .+.+...|++++.          
T Consensus        86 ~~~~~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~i~~a~~~~~~v~~~~~~~~~~~~~~~----------  155 (302)
T 2ftp_A           86 LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGD----------  155 (302)
T ss_dssp             HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBC----------
T ss_pred             CHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCC----------
T ss_conf             1479999836998899973054999988763008889987889999998620011033310257775553----------


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCEEECCCCCC
Q ss_conf             46289999999999999962897352466767
Q gi|255764463|r  149 IVNDETIELISHAAVIQADAGADIIAPSEMMD  180 (337)
Q Consensus       149 IdND~Tl~~L~k~Al~~A~AGaDivAPSdMMD  180 (337)
                      ++    .+.+.+.+....+.|+|.|.-.|++-
T Consensus       156 ~~----~~~~~~~~~~~~~~g~d~i~l~Dt~G  183 (302)
T 2ftp_A          156 VD----PRQVAWVARELQQMGCYEVSLGDTIG  183 (302)
T ss_dssp             CC----HHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EE----HHHHHHHHHHHHHCCCEEECCCCCCC
T ss_conf             10----89999999999965973642577446


No 261
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=20.00  E-value=41  Score=13.72  Aligned_cols=27  Identities=19%  Similarity=0.149  Sum_probs=16.5

Q ss_pred             CCCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             632889999999999998889367633
Q gi|255764463|r   62 VMRMSIDVAVEKIKQVADLGIPAIAIF   88 (337)
Q Consensus        62 v~R~Sid~L~~eie~~~~lGI~av~LF   88 (337)
                      ..-++.+.+.-.++-+.+++-+-|+-+
T Consensus        23 fNv~~~e~~~avi~AAee~~sPvIlq~   49 (323)
T 2isw_A           23 FNVNNMEQIQGIMKAVVQLKSPVILQC   49 (323)
T ss_dssp             EECCSHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             EEECCHHHHHHHHHHHHHHCCCEEEEC
T ss_conf             753899999999999999499999997


Done!