HHSEARCH alignment of GI: 255764463 and SCOP domain: d1l6sa_

Alignment
>d1l6sa_ c.1.10.3 (A:) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=1082.51  Aligned_cols=316  Identities=42%  Similarity=0.679  Sum_probs=309.9

Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf             88585631289889998634778887733116667589881104888786328899999999999988893676330256
Q gi|255764463|r   13 CHRRMRRNRKSNWIREMVREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIP   92 (337)
Q Consensus        13 p~~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~   92 (337)
                      ..+||||||+|+|+|+||+||+|+++|||||+||+||++.++||+||||+||||+|.|++++++++++||++|+|||++ 
T Consensus         3 l~~R~RRlR~~~~iR~Lv~Et~Ls~~dLI~PiFV~eG~~~~~~I~SMPGv~R~Sid~Lv~eie~~~~lGI~av~LFpv~-   81 (323)
T d1l6sa_           3 LIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGIS-   81 (323)
T ss_dssp             CSCCGGGGGSSHHHHHHHCCCCCCGGGEEEEEEEETTCSSCEECTTSTTCEEEEGGGHHHHHHHHHHHTCCEEEEEEEC-
T ss_pred             CCCCCCCCCCCHHHHHHHHHCCCCHHHCEEEEEEEECCCCCEECCCCCCCEEECHHHHHHHHHHHHHCCCCEEEEECCC-
T ss_conf             2426664589879999986279888995520399238998424589999667489999999999997003424554125-


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf             33455445421576537999999999730144798613327100114310013654462899999999999999628973
Q gi|255764463|r   93 MDLRNNTGSHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILCDGEIVNDETIELISHAAVIQADAGADI  172 (337)
Q Consensus        93 ~~~Kd~~GseA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~~g~IdND~Tl~~L~k~Al~~A~AGaDi  172 (337)
                       ++||+.|++|||+||++||||+.||+.||||+|||||||||||+||||||++++.||||+|++.|+|||++||+|||||
T Consensus        82 -~~kdk~gseA~n~d~lv~rai~~iK~~~pdi~vi~DVcLcpYT~hGHcGil~~~~IdND~Tl~~L~k~Al~~A~AGaDi  160 (323)
T d1l6sa_          82 -HHTDETGSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGADF  160 (323)
T ss_dssp             -SSCBSSCGGGGSTTSHHHHHHHHHHHHCTTSEEEEEECSTTTBSSCCSSCBCSSSBCHHHHHHHHHHHHHHHHHHTCSE
T ss_pred             -CCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCE
T ss_conf             -6667882443188627888999998648874466311233333323531321577870889999999999999714783


Q ss_pred             EECCCCCCCHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             52466767799999999987788577300336664354301016753102446777744315721147889888876640
Q gi|255764463|r  173 IAPSEMMDGRVQEIRKKLDSHGHINVGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQE  252 (337)
Q Consensus       173 vAPSdMMDGrV~aIR~~Ld~~g~~~~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~E  252 (337)
                      |||||||||||++||++||++||++|+|||||+||+|+||||||||++|+| + |||+||||||+|++||+||+++|++|
T Consensus       161 VAPSdMMDGrV~aIR~~Ld~~g~~~v~ImSYsaKyaS~fYGPFRdA~~s~~-~-gdr~sYQmd~~n~~ea~~e~~~d~~E  238 (323)
T d1l6sa_         161 IAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSAL-K-GDRKSYQMNPMNRREAIRESLLDEAQ  238 (323)
T ss_dssp             EEECSCCTTHHHHHHHHHHHTTCTTCEEBCCCEEBCCSCCHHHHHHHTCCC-S-SCCTTTSBCTTCHHHHHHHHHHHHHT
T ss_pred             EECCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHCCCCCCCHHHHHHCCCC-C-CCCCCEECCCCCCHHHHHHHHHHHHH
T ss_conf             530456678799999999966734661321134204212330278752887-8-99841001753102788999998862


Q ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHH
Q ss_conf             89879955311458999999962499899993461899999999888978899999999999772699998201899999
Q gi|255764463|r  253 SADMLLVKPGLPYLDVCFRIKEKFGLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAAR  332 (337)
Q Consensus       253 GAD~lMVKPa~~yLDii~~~k~~~~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~  332 (337)
                      |||||||||||||||||+++|++|++|++||||||||||||+|+++||+|++++++|+|++|||||||+||||||+|+|+
T Consensus       239 GAD~lmVKPa~~yLDii~~~k~~~~~Pv~aYqVSGEYami~~aa~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~  318 (323)
T d1l6sa_         239 GADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAE  318 (323)
T ss_dssp             TCSBEEEESCTTCHHHHHHHHTTCSSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHTTCSEEEETTHHHHHH
T ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHH
T ss_conf             56658853313568999999980599889997628999999999869985674999999999862999997707899998


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
domain: 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
species: Escherichia coli [TaxId: 562]