HHSEARCH alignment of GI: 255764463 and SCOP domain: d1pv8a_

Alignment
>d1pv8a_ c.1.10.3 (A:) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=1057.61  Aligned_cols=314  Identities=36%  Similarity=0.627  Sum_probs=308.5

Q ss_pred             CCHHHHHH-HHCCCCCHHHCCCCEEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
Q ss_conf             89889998-63477888773311666758988110488878632889999999999998889367633025633455445
Q gi|255764463|r   22 KSNWIREM-VREHRLSVSDLILPIFLTSGEKTVESINSMPDVMRMSIDVAVEKIKQVADLGIPAIAIFPNIPMDLRNNTG  100 (337)
Q Consensus        22 ~~~~iR~L-v~Et~Ls~~dLI~PiFV~eg~~~k~~I~SMPGv~R~Sid~L~~eie~~~~lGI~av~LFp~I~~~~Kd~~G  100 (337)
                      .|+++|+| ++||+|+++|||||+||+||.+.++||+||||++|||+|.|++++++++++||++|+|||++++++||+.|
T Consensus         2 ~hp~~r~~~~sEt~Ls~~dLI~PiFV~eg~~~~~~I~SMPGv~R~sid~L~~~ie~~~~lGI~ai~LFpv~~~~~Kd~~g   81 (320)
T d1pv8a_           2 LHPLLRAWQTATTTLNASNLIYPIFVTDVPDDIQPITSLPGVARYGVKRLEEMLRPLVEEGLRCVLIFGVPSRVPKDERG   81 (320)
T ss_dssp             CCHHHHHHHTTTTCCCGGGEEEEEEECSCTTCEEECSSSTTCEEECHHHHHHHHHHHHHHTCCEEEEEECC---------
T ss_pred             CCHHHHHHHHHCCCCCHHHCEEEEEEEECCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
T ss_conf             88577657775372478995631499008998214589999743299999999999998899989985636752457778


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC
Q ss_conf             421576537999999999730144798613327100114310013-6544628999999999999996289735246676
Q gi|255764463|r  101 SHIIDPDNLINEGICAIKKNIPNIGIITDVALDPFTIHGHDGILC-DGEIVNDETIELISHAAVIQADAGADIIAPSEMM  179 (337)
Q Consensus       101 seA~n~dglv~rAIr~IK~~fpdl~vi~DVcLc~YT~hGHcGi~~-~g~IdND~Tl~~L~k~Al~~A~AGaDivAPSdMM  179 (337)
                      ++|||++|++|||||.||+.|||++|||||||||||+||||||++ +|+||||+|+++|+|||++||+||||+|||||||
T Consensus        82 seA~n~~~lv~rair~iK~~fpdl~vi~DVcLc~YT~hGHcGil~~~~~IdND~Tl~~L~k~Al~~A~AGaDiVAPSdMM  161 (320)
T d1pv8a_          82 SAADSEESPAIEAIHLLRKTFPNLLVACDVCLCPYTSHGHCGLLSENGAFRAEESRQRLAEVALAYAKAGCQVVAPSDMM  161 (320)
T ss_dssp             -----CCSHHHHHHHHHHHHSTTSEEEEEECCC---------------CHHHHHHHHHHHHHHHHHHHHTCSEEEECC--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf             33412340678999999987633467602334523240244224114655838999999999999996266636402335


Q ss_pred             CCHHHHHHHHHHHCCCCC-CCEECHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             779999999998778857-7300336664354301016753102446777744315721147889888876640898799
Q gi|255764463|r  180 DGRVQEIRKKLDSHGHIN-VGIMPYVAKFNSSFYGPYRDAISTRDLLKGDKKTYYLDPANVQEAIREASIDIQESADMLL  258 (337)
Q Consensus       180 DGrV~aIR~~Ld~~g~~~-~~ImsYsaKfaS~fYgPFRdA~~S~p~~~gdr~sYQmd~~n~~eA~~e~~~D~~EGAD~lM  258 (337)
                      ||||++||++||++||.+ |+|||||+||+|+||||||||++|+|+| |||+||||||+|++||+||+++|++|||||||
T Consensus       162 DGrV~aIR~~Ld~~g~~~~v~ImSYsaKyaS~fYGPFRdA~~s~p~~-gdr~tYQmd~~n~~eA~~e~~~D~~EGAD~lM  240 (320)
T d1pv8a_         162 DGRVEAIKEALMAHGLGNRVSVMSYSAKFASCFYGPFRDAAKSSPAF-GDRRCYQLPPGARGLALRAVDRDVREGADMLM  240 (320)
T ss_dssp             CCHHHHHHHHHHHTTCTTTCEEBCCCEECCCGGGHHHHHCC--------------CCTTCHHHHHHHHHHHHHTTCSBEE
T ss_pred             HHHHHHHHHHHHHCCCCCCCEEECHHHHCCCHHHHHHHHHHHCCCCC-CCCCEEEECCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf             17999999999865882641002134302711323459987148567-87521421862027899999998754876576


Q ss_pred             ECCCHHHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHC
Q ss_conf             553114589999999624-998999934618999999998889788999999999997726999982018999999850
Q gi|255764463|r  259 VKPGLPYLDVCFRIKEKF-GLPTFAYQVSGEYAMIKAASLQGWINKNDAMMESLLAFKRAGCDGIFTYFAMEAARILTH  336 (337)
Q Consensus       259 VKPa~~yLDii~~~k~~~-~~P~~aYqVSGEYami~~a~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~~L~~  336 (337)
                      |||||||||||+++|++| ++|++||||||||||||+|+++||+|++++++|+|++|||||||+||||||+++|+||+|
T Consensus       241 VKPa~~yLDiI~~~k~~~~~~Pv~aYqVSGEYami~aa~~~g~~d~~~~~~E~l~~~kRAGAd~IitY~A~~~a~~L~~  319 (320)
T d1pv8a_         241 VKPGMPYLDIVREVKDKHPDLPLAVYHVSGEFAMLWHGAQAGAFDLKAAVLEAMTAFRRAGADIIITYYTPQLLQWLKE  319 (320)
T ss_dssp             EESCGGGHHHHHHHHHHSTTSCEEEEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTCSEEEETTHHHHHHHTTT
T ss_pred             EEHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHC
T ss_conf             2046889999999886278998899976279999999998799766779999999998629999987019999998742


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
domain: 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase)
species: Human (Homo sapiens) [TaxId: 9606]