HHsearch alignment for GI: 255764464 and conserved domain: PRK05578

>PRK05578 cytidine deaminase; Validated.
Probab=97.72  E-value=0.0008  Score=43.86  Aligned_cols=91  Identities=22%  Similarity=0.258  Sum_probs=62.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHC-CCCCEEEEEE-ECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf             985699999999999988757-9980899998-38909998734735448864251134456666414885454116886
Q gi|255764464|r    1 MKKGNVFMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV   78 (149)
Q Consensus         1 M~~d~~~M~~A~~~A~~a~~~-g~~PvGaviv-~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYt   78 (149)
T Consensus         1 ~d~~~L-~~~A~~a~~~AyaPYS~F~VGAall~~~G~i~~-G~NvEnasy~~~~CAEr~Ai~~avs~-g~~~i~~iav~~   77 (132)
T PRK05578          1 MDWKEL-IEAAVEASEKAYAPYSKFPVGAALLTDDGRIYT-GCNIENASYGLTNCAERTAIFKAISE-GGGRLVAIACVG   77 (132)
T ss_pred             CCHHHH-HHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEE-EEEEECCCCCCCCCHHHHHHHHHHHC-CCCCEEEEEEEC
T ss_conf             978999-999999998366985688067999908998999-89760578887755779999999864-897378999984


Q ss_pred             C----CCCCHHHHHHHHHCC
Q ss_conf             1----677688989998608
Q gi|255764464|r   79 T----LEPCTMCAAAISLAR   94 (149)
Q Consensus        79 T----lEPC~MC~~Ai~~ag   94 (149)
T Consensus        78 ~~~~~~~PCG~CRQvl~Ef~   97 (132)
T PRK05578         78 ETGEPLSPCGRCRQVLAEFG   97 (132)
T ss_pred             CCCCCCCCCHHHHHHHHHHC
T ss_conf             89982697524899999856