HHsearch alignment for GI: 255764464 and conserved domain: PRK08298

>PRK08298 cytidine deaminase; Validated.
Probab=97.30  E-value=0.0061  Score=38.57  Aligned_cols=101  Identities=12%  Similarity=0.063  Sum_probs=69.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEE-ECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEE-
Q ss_conf             9856999999999999887579980899998-38909998734735448864251134456666414885454116886-
Q gi|255764464|r    1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV-   78 (149)
Q Consensus         1 M~~d~~~M~~A~~~A~~a~~~g~~PvGaviv-~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYt-   78 (149)
T Consensus         1 m~~~q~Lv~~A~~~~~~ry~~~~~-gaAAllt~dG~I~t-G~NvEnasy~~~lCAEr~Ai~~Avs~-G~r~~~~I~V~~~   77 (128)
T PRK08298          1 MNIEQALYDAAKELLEQRYPNGWG-GAAAMRTEDGTILT-SVAPEVINASTELCMETGAICEAHKL-QKRVTHSICVARE   77 (128)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCC-EEEEEEECCCCEEE-EECCCCCCCCCCCCHHHHHHHHHHHC-CCCEEEEEEEEEC
T ss_conf             947899999999999974746675-38999947997999-74215566774515778999999976-9946999999916


Q ss_pred             -------CCCCCHHHHHHHHHCCCC-EEEEEECC
Q ss_conf             -------167768898999860888-59997117
Q gi|255764464|r   79 -------TLEPCTMCAAAISLARIR-RLYYGASN  104 (149)
Q Consensus        79 -------TlEPC~MC~~Ai~~agI~-rVvyg~~d  104 (149)
T Consensus        78 ~~~~~~~vl~PCG~CRQ~L~Efg~d~~V~v~~~d  111 (128)
T PRK08298         78 NEHSPLKVLSPCGVCQERLFYWGPDVMVAVTNAD  111 (128)
T ss_pred             CCCCCEEEECCCHHHHHHHHHHCCCCEEEEECCC
T ss_conf             8888726658977999999997999789996899