HHsearch alignment for GI: 255764464 and conserved domain: PRK12411

>PRK12411 cytidine deaminase; Provisional.
Probab=98.05  E-value=9.8e-05  Score=49.34  Aligned_cols=98  Identities=17%  Similarity=0.269  Sum_probs=67.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHC-CCCCEEEEEE-ECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf             985699999999999988757-9980899998-38909998734735448864251134456666414885454116886
Q gi|255764464|r    1 MKKGNVFMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV   78 (149)
Q Consensus         1 M~~d~~~M~~A~~~A~~a~~~-g~~PvGaviv-~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYt   78 (149)
T Consensus         1 m~~~-~L~~~A~~a~~~AYaPYS~F~VGAall~~~G~i~-~G~NvEnasy~~t~CAEr~Ai~~avs~-g~~~~~~I~v~~   77 (132)
T PRK12411          1 MNSK-QLIQEAIEARKQAYVPYSKFQVGAALLTQDGKVY-RGCNVENASYGLCNCAERTALFKAVSE-GDKEFVAIAIVA   77 (132)
T ss_pred             CCHH-HHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEE-EEECCCCCCCCCCEEHHHHHHHHHHHC-CCCCEEEEEEEC
T ss_conf             9889-9999999999718288679959999995899999-987415677887513377799999864-887689999986


Q ss_pred             C----CCCCHHHHHHHHHCC--CCEEEEE
Q ss_conf             1----677688989998608--8859997
Q gi|255764464|r   79 T----LEPCTMCAAAISLAR--IRRLYYG  101 (149)
Q Consensus        79 T----lEPC~MC~~Ai~~ag--I~rVvyg  101 (149)
T Consensus        78 ~~~~~~~PCG~CRQvl~Ef~~~~~~i~~~  106 (132)
T PRK12411         78 DTKRPVPPCGACRQVMVELCKQDTKVYLS  106 (132)
T ss_pred             CCCCCCCCCHHHHHHHHHHCCCCCEEEEE
T ss_conf             89986797388899999966899579998