HHsearch alignment for GI: 255764464 and conserved domain: TIGR01354
>TIGR01354 cyt_deam_tetra cytidine deaminase; InterPro: IPR006262 Cytidine deaminase is a small homotetrameric zinc metalloprotein. It is found in humans and most bacteria. A related homodimeric form, IPR006263 from INTERPRO, with a much larger subunit is found in E. coli and in Arabidopsis. Both types may act on deoxycytidine as well as cytidine.; GO: 0004126 cytidine deaminase activity, 0046087 cytidine metabolic process.
Probab=97.58 E-value=0.00029 Score=46.55 Aligned_cols=90 Identities=17% Similarity=0.162 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHCC-CCCEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH--CCCCC---CCCEEEEEC
Q ss_conf 99999999999887579-9808999983890999873473544886425113445666641--48854---541168861
Q gi|255764464|r 6 VFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRI--LSQEI---LPEVDLYVT 79 (149)
Q Consensus 6 ~~M~~A~~~A~~a~~~g-~~PvGaviv~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~--~~~~~---l~~~tlYtT 79 (149)
T Consensus 2 ~l~~~a~~a~~~aY~PYS~F~VGAa~~t~dg~~f~G~NvENASY~~~~CAEr~Ai~~~~~~yP~GG~r~G~f~~~~~~~~ 81 (135)
T TIGR01354 2 KLFKAAQEALKKAYAPYSNFKVGAALLTKDGRVFTGVNVENASYGLTICAERSAIGKAISAYPAGGRRDGKFVAIAVAAS 81 (135)
T ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEC
T ss_conf 68889999998527876688116999856998898763421367670468999999998608878753551279998626
Q ss_pred C-----CCCHHHHHHHHHCCC
Q ss_conf 6-----776889899986088
Q gi|255764464|r 80 L-----EPCTMCAAAISLARI 95 (149)
Q Consensus 80 l-----EPC~MC~~Ai~~agI 95 (149)
T Consensus 82 ~~~D~~~PCG~CRQvl~EF~~ 102 (135)
T TIGR01354 82 ANDDSVSPCGACRQVLAEFAK 102 (135)
T ss_pred CCCCCCCCCCHHHHHHHHHCC
T ss_conf 988832676035777887508