HHsearch alignment for GI: 255764464 and conserved domain: cd01284
>cd01284 Riboflavin_deaminase-reductase Riboflavin-specific deaminase. Riboflavin biosynthesis protein RibD (Diaminohydroxyphosphoribosylaminopyrimidine deaminase) catalyzes the deamination of 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate, which is an intermediate step in the biosynthesis of riboflavin.The ribG gene of Bacillus subtilis and the ribD gene of E. coli are bifunctional and contain this deaminase domain and a reductase domain which catalyzes the subsequent reduction of the ribosyl side chain.
Probab=99.96 E-value=4.8e-29 Score=195.40 Aligned_cols=105 Identities=33% Similarity=0.450 Sum_probs=89.7
Q ss_pred HHHHHHHHHHH--HHCCCCCEEEEEEE-CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCH
Q ss_conf 99999999988--75799808999983-8909998734735448864251134456666414885454116886167768
Q gi|255764464|r 8 MSCALEEAQNA--ALRNEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCT 84 (149)
Q Consensus 8 M~~A~~~A~~a--~~~g~~PvGaviv~-~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTlEPC~ 84 (149)
T Consensus 1 M~~Ai~lA~~~~g~t~pnP~VGaViv~~~g~Iis~g~~~----~~g~~HAE~~Ai~~a~~----~~~~g~tlyvTLEPC~ 72 (115)
T cd01284 1 MRRALELAEKGRGLTSPNPPVGCVIVDDDGEIVGEGYHR----KAGGPHAEVNALASAGE----KLARGATLYVTLEPCS 72 (115)
T ss_pred CHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEECC----CCCCHHHHHHHHHHHHH----HCCCCCEEEEEECCCC
T ss_conf 979999998537988999998999991799899988479----89974099999998523----1357976999867834
Q ss_pred H------HHHHHHHCCCCEEEEEECCCCCCEECCHHHHHHCC
Q ss_conf 8------98999860888599971179885017413444316
Q gi|255764464|r 85 M------CAAAISLARIRRLYYGASNPKGGGIENGTQFYTLA 120 (149)
Q Consensus 85 M------C~~Ai~~agI~rVvyg~~d~~~g~~~~~~~~~~~~ 120 (149)
T Consensus 73 ~~g~tp~Ca~ai~~~gI~~Vv~g~~DP~p~v~g~G~~~Lk~~ 114 (115)
T cd01284 73 HHGKTPPCVDAIIEAGIKRVVVGVRDPNPLVAGKGAERLRAA 114 (115)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHC
T ss_conf 789875499999983929999967594977488789999867