HHsearch alignment of GI: 255764464 and MMDB domain: 2b3j_A_
>2b3j_A (A:) TRNA adenosine deaminase; mixed alpha-beta, protein-RNA complex, RNA stem-loop, hydrolase/RNA complex; HET: P5P; 2.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=0 Score=297.16 Aligned_cols=149 Identities=37% Similarity=0.615 Sum_probs=145.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf 98569999999999998875799808999983890999873473544886425113445666641488545411688616
Q gi|255764464|r 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 (149)
Q Consensus 1 M~~d~~~M~~A~~~A~~a~~~g~~PvGaviv~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTl 80 (149)
|++|++||++|+++|+++...|+.|||||||++|+||+.|+|++....||+.|||+++++++....+..++++||||||+
T Consensus 4 ~~~de~~M~~a~~~A~~~~~~g~~pvGaviv~~g~ii~~g~N~~~~~~~~~~Hae~~a~~~a~~~~~~~~l~~~tly~T~ 83 (159)
T 2b3j_A 4 MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVTL 83 (159)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSCCTTEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf 76799999999999998541699988999984663100120210026874211467777899997288777786676524
Q ss_pred CCCHHHHHHHHHCCCCEEEEEECCCCCCEECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
Q ss_conf 776889899986088859997117988501741344431689999879928218999999899988409
Q gi|255764464|r 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 (149)
Q Consensus 81 EPC~MC~~Ai~~agI~rVvyg~~d~~~g~~~~~~~~~~~~~~~~~~~v~~gvl~ee~~~Ll~~ff~~kR 149 (149)
|||+||++||+|+||+||||+..+++.+..++...++....++|+++|++|++++||.+|+++||+++|
T Consensus 84 EPC~mC~~ai~~agI~rVvy~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~gvl~~e~~~l~~~f~~~~~ 152 (159)
T 2b3j_A 84 EPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTFFKNLR 152 (159)
T ss_dssp CCCHHHHHHHHHTTCSEEEEEECCTTTCTBTTSCBTTSCTTSSCCCEEECCTTHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 751667889986145648997227998755738899885799999679868199999999999999998