HHsearch alignment of GI: 255764464 and MMDB domain: 3dmo_A_

>3dmo_A (A:) Cytidine deaminase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.60A {Burkholderia pseudomallei}
Probab=97.77  E-value=0.00049  Score=44.77  Aligned_cols=90  Identities=17%  Similarity=0.171  Sum_probs=62.8

Q ss_pred             CHHHHHHHHHHHHHHHHHC-CCCCEEEEEEE-CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEE--
Q ss_conf             5699999999999988757-99808999983-8909998734735448864251134456666414885454116886--
Q gi|255764464|r    3 KGNVFMSCALEEAQNAALR-NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV--   78 (149)
Q Consensus         3 ~d~~~M~~A~~~A~~a~~~-g~~PvGaviv~-~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYt--   78 (149)
                      +++..++.|.+.+.+++.. .+.+|||++.. +|+|. .|.|--+...+++-|||..||-++...-... ..-..+++  
T Consensus        10 ~~~~L~~~A~~a~~~ayaPyS~~~VgAai~~~~G~i~-~G~nvEna~~~~~lcAE~~Ai~~a~~~g~~~-~~~~~~~~~~   87 (138)
T 3dmo_A           10 THHALIEAAKAAREKAYAPYSNFKVGAALVTNDGKVF-HGCNVENASYGLCNCAERTALFSALAAGYRP-GEFAAIAVVG   87 (138)
T ss_dssp             CHHHHHHHHHHHHTTCBCTTTCCCEEEEEEETTSCEE-EEECBCCSSGGGCBCHHHHHHHHHHHTTCCT-TCEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEE-EEEEECCCCCCCCCCHHHHHHHHHHHCCCCC-CCEEEEEEEC
T ss_conf             9999999999999837597568938999993799999-9887305667876479999999999849987-7189999977


Q ss_pred             ----CCCCCHHHHHHHHHCC
Q ss_conf             ----1677688989998608
Q gi|255764464|r   79 ----TLEPCTMCAAAISLAR   94 (149)
Q Consensus        79 ----TlEPC~MC~~Ai~~ag   94 (149)
                          ..-||-+|-..|...+
T Consensus        88 ~~~~~~~PCG~CRq~l~e~~  107 (138)
T 3dmo_A           88 ETHGPIAPCGACRQVMIELG  107 (138)
T ss_dssp             SCSSSCCCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHC
T ss_conf             88887486288999999717