HHsearch results for GI: 255764464 and protein with PDBid: 2b3j_A

>2b3j_A TRNA adenosine deaminase; mixed alpha-beta, protein-RNA complex, RNA stem-loop, hydrolase/RNA complex; HET: P5P; 2.00A {Staphylococcus aureus subsp} SCOP: c.97.1.2
Probab=100.00  E-value=0  Score=316.71  Aligned_cols=149  Identities=37%  Similarity=0.615  Sum_probs=145.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf             98569999999999998875799808999983890999873473544886425113445666641488545411688616
Q gi|255764464|r    1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL   80 (149)
Q Consensus         1 M~~d~~~M~~A~~~A~~a~~~g~~PvGaviv~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTl   80 (149)
                      |++|++||++||++|++|...|++|||||||++|++|+.|+|+++..+||++|||++||++++++++..+++++|||||+
T Consensus         4 m~~D~~fM~~Al~~A~~a~~~g~~pVGaViV~~~~ii~~g~~~~~~~~~~~~HAE~~ai~~a~~~~~~~~l~~~tly~t~   83 (159)
T 2b3j_A            4 MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVTL   83 (159)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSCCTTEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEECCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
T ss_conf             76799999999999998540699989999986993898762310058863358999999999998388777885574037


Q ss_pred             CCCHHHHHHHHHCCCCEEEEEECCCCCCEECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
Q ss_conf             776889899986088859997117988501741344431689999879928218999999899988409
Q gi|255764464|r   81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR  149 (149)
Q Consensus        81 EPC~MC~~Ai~~agI~rVvyg~~d~~~g~~~~~~~~~~~~~~~~~~~v~~gvl~ee~~~Ll~~ff~~kR  149 (149)
                      |||+||++||+|+||++||||+.||+.++.++..+++....++|+++|++||+++||.+|+++||++||
T Consensus        84 EPC~mC~~ai~~agI~~Vv~g~~dp~~~~~g~~~~~l~~~~i~~~~~v~~Gvl~~e~~~Ll~~ff~~~R  152 (159)
T 2b3j_A           84 EPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTFFKNLR  152 (159)
T ss_dssp             CCCHHHHHHHHHTTCSEEEEEECCTTTCTBTTSCBTTSCTTSSCCCEEECCTTHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHH
T ss_conf             996899999999699989999748998755638899872699999879828499999999999999998