HHSEARCH alignment of GI: 255764464 and SCOP domain: d1p6oa_

Alignment
>d1p6oa_ c.97.1.2 (A:) Cytosine deaminase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=7.2e-43  Score=275.73  Aligned_cols=139  Identities=25%  Similarity=0.408  Sum_probs=119.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCEEEEEE--ECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf             856999999999999887579980899998--389099987347354488642511344566664148854541168861
Q gi|255764464|r    2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT   79 (149)
Q Consensus         2 ~~d~~~M~~A~~~A~~a~~~g~~PvGaviv--~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtT   79 (149)
                      +.|++||++|+++|+++...|++|||||||  ++|+||+.|+|++.+.+|||+|||++||+++ .+++..+|+++|||||
T Consensus         7 ~~D~~~M~~A~~~A~~a~~~g~~PvGaviV~~~~g~Iia~g~N~~~~~~~~~~HAE~~Ai~~a-~~~~~~~l~~~tlyvT   85 (156)
T d1p6oa_           7 KWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTLENC-GRLEGKVYKDTTLYTT   85 (156)
T ss_dssp             TTHHHHHHHHHHHHHHHHHTTSCCCEEEEEETTTCCEEEEEECCHHHHTCSSCCHHHHHHHHH-CSCCHHHHTTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHH-HCCCCCCCCCEEEEEE
T ss_conf             999999999999999887769998899999917998999970566545665433288999887-3036543223378850


Q ss_pred             CCCCHHHHHHHHHCCCCEEEEEECCCCCCEECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
Q ss_conf             6776889899986088859997117988501741344431689999879928218999999899988409
Q gi|255764464|r   80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR  149 (149)
Q Consensus        80 lEPC~MC~~Ai~~agI~rVvyg~~d~~~g~~~~~~~~~~~~~~~~~~~v~~gvl~ee~~~Ll~~ff~~kR  149 (149)
                      +|||+||++||+|+||+|||||+.++..+   .+...+....    .+| .+|+++||.+||++||++||
T Consensus        86 lEPC~mC~~ai~~~gI~rVv~G~~~~~~~---~g~~~L~~~~----~~v-~~v~~~ec~~Ll~~Ff~~rr  147 (156)
T d1p6oa_          86 LSPCDMCTGAIIMYGIPRCVVGENVNFKS---KGEKYLQTRG----HEV-VVVDDERCKKIMKQFIDERP  147 (156)
T ss_dssp             ECCCHHHHHHHHHHTCCEEEEEESSSCCC---THHHHHHHTT----CEE-EECCCHHHHHHHHHHHHHCH
T ss_pred             CCCCHHHHHHHHHHCCCEEEECCCCCCCC---CHHHHHHCCC----EEE-EEECHHHHHHHHHHHHHHCC
T ss_conf             56877899999980999899917999886---5589861488----278-54579999999999999721


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Cytidine deaminase-like
superfamily: Cytidine deaminase-like
family: Deoxycytidylate deaminase-like
domain: Cytosine deaminase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]