HHSEARCH alignment of GI: 255764464 and SCOP domain: d2b3ja1

Alignment
>d2b3ja1 c.97.1.2 (A:1-151) tRNA adenosine deaminase TadA {Staphylococcus aureus [TaxId: 1280]}
Probab=100.00  E-value=0  Score=318.43  Aligned_cols=149  Identities=37%  Similarity=0.615  Sum_probs=146.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf             98569999999999998875799808999983890999873473544886425113445666641488545411688616
Q gi|255764464|r    1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL   80 (149)
Q Consensus         1 M~~d~~~M~~A~~~A~~a~~~g~~PvGaviv~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTl   80 (149)
                      |++|++||++||++|++|...|++|||||||++|++|+.|+|++....|||.|||+++++++++.++..++++++||||+
T Consensus         1 m~~D~~fM~~Ai~~A~~a~~~g~~PVGaViV~~~~ii~~g~~~~~~~~~~~~HAe~~a~~~~~~~~~~~~~~~~~ly~t~   80 (151)
T d2b3ja1           1 MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVTL   80 (151)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSCCTTEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf             96189999999999998453698989999973664101331000136761100256664799997288777787688743


Q ss_pred             CCCHHHHHHHHHCCCCEEEEEECCCCCCEECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
Q ss_conf             776889899986088859997117988501741344431689999879928218999999899988409
Q gi|255764464|r   81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR  149 (149)
Q Consensus        81 EPC~MC~~Ai~~agI~rVvyg~~d~~~g~~~~~~~~~~~~~~~~~~~v~~gvl~ee~~~Ll~~ff~~kR  149 (149)
                      |||+||++||+|+||+|||||+.||+.++.++..+++..+.++|+++|++|||++||.+|+++||++||
T Consensus        81 ePC~mC~~aii~~gI~~Vv~g~~d~~~~~~g~~~~~l~~~~i~~~~~v~~Gvl~~e~~~L~~~Ff~~~r  149 (151)
T d2b3ja1          81 EPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTFFKNLR  149 (151)
T ss_dssp             CCCHHHHHHHHHTTCSEEEEEECCTTTCTBTTSCBTTSCTTSSCCCEEECCTTHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHCHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHH
T ss_conf             643533120665135568997406998746765445664578999879769189999999999999985


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Cytidine deaminase-like
superfamily: Cytidine deaminase-like
family: Deoxycytidylate deaminase-like
domain: tRNA adenosine deaminase TadA
species: Staphylococcus aureus [TaxId: 1280]