Query gi|255764464|ref|YP_003064771.2| Cytidine/deoxycytidylate deaminase, zinc-binding region [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 149
No_of_seqs 109 out of 4406
Neff 6.6
Searched_HMMs 13730
Date Wed Jun 1 05:12:21 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 255764464.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wwra1 c.97.1.2 (A:1-151) tRN 100.0 0 0 319.5 15.6 146 3-149 2-147 (151)
2 d2b3ja1 c.97.1.2 (A:1-151) tRN 100.0 0 0 318.4 15.2 149 1-149 1-149 (151)
3 d1z3aa1 c.97.1.2 (A:13-168) tR 100.0 0 0 314.7 15.5 147 3-149 6-152 (156)
4 d2g84a1 c.97.1.2 (A:1-189) Put 100.0 2.8E-45 0 290.7 12.5 147 2-148 24-181 (189)
5 d2a8na1 c.97.1.2 (A:2-131) Cyt 100.0 1.5E-43 0 279.9 14.8 129 3-131 2-130 (130)
6 d1wkqa_ c.97.1.2 (A:) Guanine 100.0 6.4E-44 0 282.1 9.3 145 1-147 3-152 (158)
7 d1p6oa_ c.97.1.2 (A:) Cytosine 100.0 7.2E-43 0 275.7 12.9 139 2-149 7-147 (156)
8 d2hxva2 c.97.1.2 (A:1-147) Rib 100.0 1.1E-39 7.8E-44 256.7 14.0 133 4-147 2-142 (147)
9 d2b3za2 c.97.1.2 (A:1-145) Rib 100.0 8.6E-39 6.3E-43 251.2 12.7 133 4-149 2-142 (145)
10 d1vq2a_ c.97.1.2 (A:) Deoxycyt 100.0 3.7E-30 2.7E-34 199.3 8.3 137 3-149 2-191 (193)
11 d2d30a1 c.97.1.1 (A:1-124) mon 98.0 3.2E-05 2.3E-09 49.6 10.1 91 1-94 1-97 (124)
12 d1alna2 c.97.1.1 (A:151-294) T 97.9 1.7E-05 1.3E-09 51.1 6.5 87 3-92 37-132 (144)
13 d1r5ta_ c.97.1.1 (A:) mono-dom 97.9 0.00024 1.7E-08 44.3 12.2 90 6-96 8-108 (141)
14 d2fr5a1 c.97.1.1 (A:11-146) mo 97.8 0.00013 9.1E-09 46.0 9.6 93 8-102 5-108 (136)
15 d1uwza_ c.97.1.1 (A:) mono-dom 97.7 0.00013 9.8E-09 45.8 9.4 91 1-94 1-97 (130)
16 d1alna1 c.97.1.1 (A:1-150) Two 97.2 0.00079 5.8E-08 41.1 8.0 67 23-93 70-139 (150)
17 d2z3ga1 c.97.1.1 (A:2-124) Bla 96.9 0.0089 6.5E-07 34.8 10.6 86 4-94 6-98 (123)
18 d1zbfa1 c.55.3.1 (A:62-193) BH 59.3 1.1 7.9E-05 22.3 0.4 58 20-81 13-73 (132)
19 d2hi7b1 a.29.15.1 (B:14-162) D 45.7 2.5 0.00018 20.1 0.4 10 79-88 24-33 (149)
20 d1nuia2 g.41.3.2 (A:10-63) Zin 22.3 5.6 0.00041 18.0 -1.0 12 76-87 1-12 (54)
No 1
>d1wwra1 c.97.1.2 (A:1-151) tRNA adenosine deaminase TadA {Aquifex aeolicus [TaxId: 63363]}
Probab=100.00 E-value=0 Score=319.47 Aligned_cols=146 Identities=39% Similarity=0.604 Sum_probs=141.7
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCC
Q ss_conf 56999999999999887579980899998389099987347354488642511344566664148854541168861677
Q gi|255764464|r 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 (149)
Q Consensus 3 ~d~~~M~~A~~~A~~a~~~g~~PvGaviv~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTlEP 82 (149)
+||+||++||++|++|+..|++|||||||++|+||+.|+|++.+..||++|||++||++|+++++..+|+++|||||+||
T Consensus 2 ~~e~fM~~Ai~~A~~a~~~~~~pVGaVIV~~~~ii~~g~n~~~~~~~~~~HAE~~ai~~a~~~~~~~~l~~~tlY~TlEP 81 (151)
T d1wwra1 2 GKEYFLKVALREAKRAFEKGEVPVGAIIVKEGEIISKAHNSVEELKDPTAHAEMLAIKEACRRLNTKYLEGCELYVTLEP 81 (151)
T ss_dssp SHHHHHHHHHHHHHHHHHTTSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTCSCCTTEEEEESSCC
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC
T ss_conf 88999999999999875269999999999799566630332224675011389999999987538565578676500268
Q ss_pred CHHHHHHHHHCCCCEEEEEECCCCCCEECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
Q ss_conf 6889899986088859997117988501741344431689999879928218999999899988409
Q gi|255764464|r 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 (149)
Q Consensus 83 C~MC~~Ai~~agI~rVvyg~~d~~~g~~~~~~~~~~~~~~~~~~~v~~gvl~ee~~~Ll~~ff~~kR 149 (149)
|+||++||+|+||+|||||+.||+.|+.++..+++..+.++|+++|.+|++ +||.+||++||++||
T Consensus 82 C~mC~~ai~~~~I~rVvyg~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-ee~~~Ll~~Ff~~~R 147 (151)
T d1wwra1 82 CIMCSYALVLSRIEKVIFSALDKKHGGVVSVFNILDEPTLNHRVKWEYYPL-EEASELLSEFFKKLR 147 (151)
T ss_dssp BHHHHHHHHHTTCSEEEESSCCTTTBTTTTSCCGGGCTTCSSCCEEEECCC-HHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECH-HHHHHHHHHHHHHHH
T ss_conf 827888999855885899845699875343888876421589988996039-999999999999972
No 2
>d2b3ja1 c.97.1.2 (A:1-151) tRNA adenosine deaminase TadA {Staphylococcus aureus [TaxId: 1280]}
Probab=100.00 E-value=0 Score=318.43 Aligned_cols=149 Identities=37% Similarity=0.615 Sum_probs=146.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf 98569999999999998875799808999983890999873473544886425113445666641488545411688616
Q gi|255764464|r 1 MKKGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 (149)
Q Consensus 1 M~~d~~~M~~A~~~A~~a~~~g~~PvGaviv~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTl 80 (149)
|++|++||++||++|++|...|++|||||||++|++|+.|+|++....|||.|||+++++++++.++..++++++||||+
T Consensus 1 m~~D~~fM~~Ai~~A~~a~~~g~~PVGaViV~~~~ii~~g~~~~~~~~~~~~HAe~~a~~~~~~~~~~~~~~~~~ly~t~ 80 (151)
T d2b3ja1 1 MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITKDDEVIARAHNLRETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVTL 80 (151)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSCCTTEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf 96189999999999998453698989999973664101331000136761100256664799997288777787688743
Q ss_pred CCCHHHHHHHHHCCCCEEEEEECCCCCCEECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
Q ss_conf 776889899986088859997117988501741344431689999879928218999999899988409
Q gi|255764464|r 81 EPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 (149)
Q Consensus 81 EPC~MC~~Ai~~agI~rVvyg~~d~~~g~~~~~~~~~~~~~~~~~~~v~~gvl~ee~~~Ll~~ff~~kR 149 (149)
|||+||++||+|+||+|||||+.||+.++.++..+++..+.++|+++|++|||++||.+|+++||++||
T Consensus 81 ePC~mC~~aii~~gI~~Vv~g~~d~~~~~~g~~~~~l~~~~i~~~~~v~~Gvl~~e~~~L~~~Ff~~~r 149 (151)
T d2b3ja1 81 EPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTFFKNLR 149 (151)
T ss_dssp CCCHHHHHHHHHTTCSEEEEEECCTTTCTBTTSCBTTSCTTSSCCCEEECCTTHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHCHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 643533120665135568997406998746765445664578999879769189999999999999985
No 3
>d1z3aa1 c.97.1.2 (A:13-168) tRNA adenosine deaminase TadA {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=0 Score=314.66 Aligned_cols=147 Identities=39% Similarity=0.566 Sum_probs=143.0
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCC
Q ss_conf 56999999999999887579980899998389099987347354488642511344566664148854541168861677
Q gi|255764464|r 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 (149)
Q Consensus 3 ~d~~~M~~A~~~A~~a~~~g~~PvGaviv~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTlEP 82 (149)
+|++||++||++|++|+..|++|||||||++|+||++|+|++....|||.|||++||+++..+.++.+|.+++||||+||
T Consensus 6 ~~e~~M~~Ai~~A~~a~~~~~~pvGaViv~~g~Iia~g~n~~~~~~~~~~HAE~~ai~~a~~~~~~~~l~~~~lytT~eP 85 (156)
T d1z3aa1 6 SHEYWMRHALTLAKRAWDEREVPVGAVLVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEP 85 (156)
T ss_dssp SHHHHHHHHHHHHHHHHHTTSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSCCTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC
T ss_conf 89999999999999854589898999999899089996011145575405677776777775313655457446402566
Q ss_pred CHHHHHHHHHCCCCEEEEEECCCCCCEECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
Q ss_conf 6889899986088859997117988501741344431689999879928218999999899988409
Q gi|255764464|r 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 (149)
Q Consensus 83 C~MC~~Ai~~agI~rVvyg~~d~~~g~~~~~~~~~~~~~~~~~~~v~~gvl~ee~~~Ll~~ff~~kR 149 (149)
|+||++||+|+||+|||||+.||+.|+.++..+.+..+..+++++|++||+++||.+|+++||++||
T Consensus 86 C~mC~~aii~~gI~rVvyg~~d~~~~~~g~~~~~l~~~~~~~~ieV~~gvl~ee~~~ll~~Ff~~~r 152 (156)
T d1z3aa1 86 CVMCAGAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFFRMRR 152 (156)
T ss_dssp CHHHHHHHHHHTCSEEEEEECCTTTCTBTTSCBCTTCTTCSSCCEEECCTTHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHH
T ss_conf 5432658987377657997523887655718899871788999689908589999999999999998
No 4
>d2g84a1 c.97.1.2 (A:1-189) Putative deaminase NE0047 {Nitrosomonas europaea [TaxId: 915]}
Probab=100.00 E-value=2.8e-45 Score=290.66 Aligned_cols=147 Identities=20% Similarity=0.261 Sum_probs=128.2
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEE--CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCC-----CCE
Q ss_conf 8569999999999998875799808999983--890999873473544886425113445666641488545-----411
Q gi|255764464|r 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAVL--NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEIL-----PEV 74 (149)
Q Consensus 2 ~~d~~~M~~A~~~A~~a~~~g~~PvGaviv~--~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l-----~~~ 74 (149)
..++.+|++||++|+++.+.|+.|||||||+ +|+||++|+|++.+.+|||+||||+||++|++++++.++ .+|
T Consensus 24 ~~~e~~M~~ai~lAr~a~~~g~~P~GaviV~~~~g~Iia~g~N~~~~~~dpt~HAEi~AI~~A~~~~~~~~l~~~~l~~~ 103 (189)
T d2g84a1 24 AAPEARMGYVLELVRANIAADGGPFAAAVFERDSGLLIAAGTNRVVPGRCSAAHAEILALSLAQAKLDTHDLSADGLPAC 103 (189)
T ss_dssp CSHHHHHHHHHHHHHHHHHTTCCSCEEEEEETTTCBEEEEEECCTTTTTCTTCCHHHHHHHHHHHHHTCSCTTCTTSCCE
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 88599999999999999876999889999978999899987087676899863499999999999863011122123685
Q ss_pred EEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCEECCHH----HHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHH
Q ss_conf 6886167768898999860888599971179885017413----4443168999987992821899999989998840
Q gi|255764464|r 75 DLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGGIENGT----QFYTLATCHHSPEIYPGISEQRSRQIIQDFFKER 148 (149)
Q Consensus 75 tlYtTlEPC~MC~~Ai~~agI~rVvyg~~d~~~g~~~~~~----~~~~~~~~~~~~~v~~gvl~ee~~~Ll~~ff~~k 148 (149)
|||||+|||+||++||+|+||+|||||+.|++.++.+... ........+++++|++|++++||.+|+++||++.
T Consensus 104 tlY~TlEPC~MC~~Ai~~a~I~rVvyga~~~d~~~~g~~~~~~~~~~~~~~~~~~ieV~~gvl~dE~~~Llk~f~~~~ 181 (189)
T d2g84a1 104 ELVTSAEPCVMCFGAVIWSGVRSLVCAARSDDVEAIGFDEGPRPENWMGGLEARGITVTTGLLRDAACALLREYNACN 181 (189)
T ss_dssp EEEEEECCCHHHHHHHHHHCCSEEEEEECHHHHHHTTCCCCCCCTTHHHHHHHTTCEEECCTTHHHHHHHHHHHHHHC
T ss_pred EEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCC
T ss_conf 788205777178778888517989998618985446765430067776788759998987876999999999999808
No 5
>d2a8na1 c.97.1.2 (A:2-131) Cytidine and deoxycytidylate deaminase CodA {Agrobacterium tumefaciens [TaxId: 358]}
Probab=100.00 E-value=1.5e-43 Score=279.92 Aligned_cols=129 Identities=63% Similarity=1.101 Sum_probs=126.4
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCC
Q ss_conf 56999999999999887579980899998389099987347354488642511344566664148854541168861677
Q gi|255764464|r 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEP 82 (149)
Q Consensus 3 ~d~~~M~~A~~~A~~a~~~g~~PvGaviv~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTlEP 82 (149)
+|++||++||++|++|...|++|||||||++|+||+.|+|++.+..||+.|||++||++|.++++.++|+++|||||+||
T Consensus 2 ~~~~fM~~Al~~A~~a~~~~~~PVGavIV~~~~ii~~g~n~~~~~~~~~~HaE~~ai~~a~~~~~~~~l~~~tly~T~EP 81 (130)
T d2a8na1 2 ERTHFMELALVEARSAGERDEVPIGAVLVLDGRVIARSGNRTRELNDVTAHAEIAVIRMACEALGQERLPGADLYVTLEP 81 (130)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCCCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTCSCCTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCC
T ss_conf 57999999999999862359997999999899199862331012466521059899999999838767889788225666
Q ss_pred CHHHHHHHHHCCCCEEEEEECCCCCCEECCHHHHHHCCCCCCCCEEEEC
Q ss_conf 6889899986088859997117988501741344431689999879928
Q gi|255764464|r 83 CTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPG 131 (149)
Q Consensus 83 C~MC~~Ai~~agI~rVvyg~~d~~~g~~~~~~~~~~~~~~~~~~~v~~g 131 (149)
|+||++||+|+||+|||||+.||+.|+.++..+++..+.+||+++|++|
T Consensus 82 C~mC~~ai~~~gI~rVvyg~~d~~~g~~gs~~~l~~~~~lnh~~eV~~G 130 (130)
T d2a8na1 82 CTMCAAAISFARIRRLYYGAQDPKGGAVESGVRFFSQPTCHHAPDVYSG 130 (130)
T ss_dssp BHHHHHHHHHTTCSEEEEEECCTTTBCSSSTTCGGGSTTCCCCCEEEEC
T ss_pred CHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEC
T ss_conf 8789999998556979999738999875642034107788998488719
No 6
>d1wkqa_ c.97.1.2 (A:) Guanine deaminase GuaD {Bacillus subtilis [TaxId: 1423]}
Probab=100.00 E-value=6.4e-44 Score=282.06 Aligned_cols=145 Identities=27% Similarity=0.373 Sum_probs=125.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHCC-CCCEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 9856999999999999887579-980899998389099987347354488642511344566664148854541168861
Q gi|255764464|r 1 MKKGNVFMSCALEEAQNAALRN-EIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 (149)
Q Consensus 1 M~~d~~~M~~A~~~A~~a~~~g-~~PvGaviv~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtT 79 (149)
|+ |+.||++|+++|+++...| ++|||||||++|+||+.|+|++...+|||+|||++||++|+++++..+|+|||||||
T Consensus 3 m~-~~~~M~~Ai~~A~~~~~~g~~~PvGaviv~~~~ii~~g~n~~~~~~~~t~HAE~~ai~~a~~~~~~~~l~~~tlyvT 81 (158)
T d1wkqa_ 3 MN-HETFLKRAVTLACEGVNAGIGGPFGAVIVKDGAIIAEGQNNVTTSNDPTAHAEVTAIRKACKVLGAYQLDDCILYTS 81 (158)
T ss_dssp CC-HHHHHHHHHHHHHHHHHTTSSSSCEEEEEETTEEEEEEECCHHHHTCTTCCHHHHHHHHHHHHHTSSSCTTEEEEEE
T ss_pred CC-HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEE
T ss_conf 88-89999999999998644689998899999566101430330204677762178999999987427641479789997
Q ss_pred CCCCHHHHHHHHHCCCCEEEEEECCCCCCEECCHHHHH----HCCCCCCCCEEEECCCHHHHHHHHHHHHHH
Q ss_conf 67768898999860888599971179885017413444----316899998799282189999998999884
Q gi|255764464|r 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFY----TLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 (149)
Q Consensus 80 lEPC~MC~~Ai~~agI~rVvyg~~d~~~g~~~~~~~~~----~~~~~~~~~~v~~gvl~ee~~~Ll~~ff~~ 147 (149)
+|||+||++||+|+||+|||||+.|++.+..++..... ..+..++...+ .+++.+|+.++++.|++.
T Consensus 82 lEPC~mC~~ai~~agi~~Vvy~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~v-~~~~~~e~~~~f~~~~~~ 152 (158)
T d1wkqa_ 82 CEPCPMCLGAIYWARPKAVFYAAEHTDAAEAGFDDSFIYKEIDKPAEERTIPF-YQVTLTEHLSPFQAWRNF 152 (158)
T ss_dssp ECCCHHHHHHHHHHCCSEEEEEECHHHHHHTTCSHHHHHHHHTSCGGGSSSCE-EECCCTTTTHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEECCE-EHHHHHHHHHHHHHHHHH
T ss_conf 47776579999963579899987589853367606776888836866266127-317789997999999886
No 7
>d1p6oa_ c.97.1.2 (A:) Cytosine deaminase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=7.2e-43 Score=275.73 Aligned_cols=139 Identities=25% Similarity=0.408 Sum_probs=119.1
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEEEE--ECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 856999999999999887579980899998--389099987347354488642511344566664148854541168861
Q gi|255764464|r 2 KKGNVFMSCALEEAQNAALRNEIPVGAVAV--LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT 79 (149)
Q Consensus 2 ~~d~~~M~~A~~~A~~a~~~g~~PvGaviv--~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtT 79 (149)
+.|++||++|+++|+++...|++||||||| ++|+||+.|+|++.+.+|||+|||++||+++ .+++..+|+++|||||
T Consensus 7 ~~D~~~M~~A~~~A~~a~~~g~~PvGaviV~~~~g~Iia~g~N~~~~~~~~~~HAE~~Ai~~a-~~~~~~~l~~~tlyvT 85 (156)
T d1p6oa_ 7 KWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTLENC-GRLEGKVYKDTTLYTT 85 (156)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTSCCCEEEEEETTTCCEEEEEECCHHHHTCSSCCHHHHHHHHH-CSCCHHHHTTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHH-HCCCCCCCCCEEEEEE
T ss_conf 999999999999999887769998899999917998999970566545665433288999887-3036543223378850
Q ss_pred CCCCHHHHHHHHHCCCCEEEEEECCCCCCEECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
Q ss_conf 6776889899986088859997117988501741344431689999879928218999999899988409
Q gi|255764464|r 80 LEPCTMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 (149)
Q Consensus 80 lEPC~MC~~Ai~~agI~rVvyg~~d~~~g~~~~~~~~~~~~~~~~~~~v~~gvl~ee~~~Ll~~ff~~kR 149 (149)
+|||+||++||+|+||+|||||+.++..+ .+...+.... .+| .+|+++||.+||++||++||
T Consensus 86 lEPC~mC~~ai~~~gI~rVv~G~~~~~~~---~g~~~L~~~~----~~v-~~v~~~ec~~Ll~~Ff~~rr 147 (156)
T d1p6oa_ 86 LSPCDMCTGAIIMYGIPRCVVGENVNFKS---KGEKYLQTRG----HEV-VVVDDERCKKIMKQFIDERP 147 (156)
T ss_dssp ECCCHHHHHHHHHHTCCEEEEEESSSCCC---THHHHHHHTT----CEE-EECCCHHHHHHHHHHHHHCH
T ss_pred CCCCHHHHHHHHHHCCCEEEECCCCCCCC---CHHHHHHCCC----EEE-EEECHHHHHHHHHHHHHHCC
T ss_conf 56877899999980999899917999886---5589861488----278-54579999999999999721
No 8
>d2hxva2 c.97.1.2 (A:1-147) Riboflavin biosynthesis protein RibD {Thermotoga maritima [TaxId: 2336]}
Probab=100.00 E-value=1.1e-39 Score=256.69 Aligned_cols=133 Identities=29% Similarity=0.397 Sum_probs=116.0
Q ss_pred HHHHHHHHHHHHHHHHH--CCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf 69999999999998875--7998089999838909998734735448864251134456666414885454116886167
Q gi|255764464|r 4 GNVFMSCALEEAQNAAL--RNEIPVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 (149)
Q Consensus 4 d~~~M~~A~~~A~~a~~--~g~~PvGaviv~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTlE 81 (149)
|+.||++|+++|+++.. .|++|||||||++|+||+.|+|+. +++.|||++||.+|.+. .+++.|+|||||+|
T Consensus 2 he~~M~~Al~~A~~~~~~~~~~~pVGaViV~~g~IIa~g~n~~----~~~~hae~~ai~~a~~~--~~~l~~~~lYvTlE 75 (147)
T d2hxva2 2 YETFMKRAIELAKKGLGRVNPNPPVGAVVVKDGRIIAEGFHPY----FGGPHAERMAIESARKK--GEDLRGATLIVTLE 75 (147)
T ss_dssp HHHHHHHHHHHHHTTTTTSTTSCCCEEEEEETTEEEEEEECCS----TTSCCHHHHHHHHHHHT--TCCCTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEECEEC----CCCCHHHHHHHHHHHHH--CCCCCCCEEEECCC
T ss_conf 6999999999998605667999948999998994777611003----68834899989999981--78877988852045
Q ss_pred CC------HHHHHHHHHCCCCEEEEEECCCCCCEECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHH
Q ss_conf 76------8898999860888599971179885017413444316899998799282189999998999884
Q gi|255764464|r 82 PC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKE 147 (149)
Q Consensus 82 PC------~MC~~Ai~~agI~rVvyg~~d~~~g~~~~~~~~~~~~~~~~~~~v~~gvl~ee~~~Ll~~ff~~ 147 (149)
|| +||++||+|+||+|||||+.||+.+ .++..+.+. ++.++|++|||++||.+|++.||+.
T Consensus 76 PC~~~~~~p~C~~ai~~agi~rVv~g~~dp~~~-~~~~~~~l~----~~~i~V~~gvl~~e~~~l~~~F~~~ 142 (147)
T d2hxva2 76 PCDHHGKTPPCTDLIIESGIKTVVIGTRDPNPV-SGNGVEKFR----NHGIEVIEGVLEEEVKKLCEFFITY 142 (147)
T ss_dssp CCCSCSSSCCHHHHHHHHTCCEEEEEECCCCGG-GCCHHHHHH----TTTCEEEECTTHHHHHHHTHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCC-CCHHHHHHH----CCCCEEEECCCHHHHHHHHHHHHHH
T ss_conf 555569972355777753865245642446541-002335655----5997899385799999999999999
No 9
>d2b3za2 c.97.1.2 (A:1-145) Riboflavin biosynthesis protein RibD {Bacillus subtilis [TaxId: 1423]}
Probab=100.00 E-value=8.6e-39 Score=251.24 Aligned_cols=133 Identities=29% Similarity=0.409 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCC--CEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf 699999999999988757998--089999838909998734735448864251134456666414885454116886167
Q gi|255764464|r 4 GNVFMSCALEEAQNAALRNEI--PVGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 (149)
Q Consensus 4 d~~~M~~A~~~A~~a~~~g~~--PvGaviv~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTlE 81 (149)
|++||++|+++|+++...+++ |||||||++|+||+.|+|+. +++.|||..|+..|..+ +.+++||+|+|
T Consensus 2 De~fM~~Al~~A~~a~~~~~~~p~VGaViV~~g~ii~~g~n~~----~~~~hae~~a~~~a~~~-----~~~~~lyvtle 72 (145)
T d2b3za2 2 EEYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLK----YGEAHAEVHAIHMAGAH-----AEGADIYVTLE 72 (145)
T ss_dssp HHHHHHHHHHHHGGGTTSSTTSCCCEEEEESSSSEEEEEECCS----TTSCCHHHHHHHHHGGG-----GTTCEEEESSC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEECCCCCCC----CCCCCHHHHHHHHHHHH-----HHCCCCCCCCC
T ss_conf 4999999999998614677999988999995572101222233----57773265789998988-----63345333456
Q ss_pred CC------HHHHHHHHHCCCCEEEEEECCCCCCEECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
Q ss_conf 76------889899986088859997117988501741344431689999879928218999999899988409
Q gi|255764464|r 82 PC------TMCAAAISLARIRRLYYGASNPKGGGIENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 (149)
Q Consensus 82 PC------~MC~~Ai~~agI~rVvyg~~d~~~g~~~~~~~~~~~~~~~~~~~v~~gvl~ee~~~Ll~~ff~~kR 149 (149)
|| +||++||+|+||+|||||+.||+.|..++..+++.. +.++|++|++++||.+||++||+++|
T Consensus 73 pc~~~~~~~mC~~aIi~agI~rVvyg~~d~~~~~~g~~~~~l~~----~gieV~~gvl~~e~~~ll~~Ff~~~r 142 (145)
T d2b3za2 73 PCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISMMKE----AGIEVREGILADQAERLNEKFLHFMR 142 (145)
T ss_dssp CCCCCSSSCCHHHHHHHHTCCEEEESSCCSCTTTTTHHHHHHHT----TTCEEEECTTHHHHHHHTHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHC----CCCEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 43456896208899998289957751334676555738899980----99989808479999999999999986
No 10
>d1vq2a_ c.97.1.2 (A:) Deoxycytidylate deaminase {Bacteriophage T4 [TaxId: 10665]}
Probab=99.96 E-value=3.7e-30 Score=199.34 Aligned_cols=137 Identities=25% Similarity=0.302 Sum_probs=110.7
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCC----------------------------------
Q ss_conf 5699999999999988757998089999838909998734735448----------------------------------
Q gi|255764464|r 3 KGNVFMSCALEEAQNAALRNEIPVGAVAVLNNKIISRAGNRNRELK---------------------------------- 48 (149)
Q Consensus 3 ~d~~~M~~A~~~A~~a~~~g~~PvGaviv~~g~ii~~g~N~~~~~~---------------------------------- 48 (149)
+++.||++|+.+|+++.. ...|||||||++|+||+.|||..-...
T Consensus 2 ~~~~~M~~A~~~A~rS~c-~~~~VGAVIV~~~~IIs~G~Ng~p~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (193)
T d1vq2a_ 2 KASTVLQIAYLVSQESKC-CSWKVGAVIEKNGRIISTGYNGSPAGGVNCCDYAAEQGWLLNKPKHAIIQGHKPECVSFGS 80 (193)
T ss_dssp CHHHHHHHHHHHHTTCCC-SSBCCEEEEEETTEEEEEEECBCCTTSCCHHHHHHHHTCEEEC------------------
T ss_pred CHHHHHHHHHHHHHHCCC-CCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHHCCCCCCCCCCC
T ss_conf 889999999999976899-8998689999899899986068867887654202443211033100111012221122322
Q ss_pred -------------------CCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCE
Q ss_conf -------------------8642511344566664148854541168861677688989998608885999711798850
Q gi|255764464|r 49 -------------------DVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLARIRRLYYGASNPKGGG 109 (149)
Q Consensus 49 -------------------d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTlEPC~MC~~Ai~~agI~rVvyg~~d~~~g~ 109 (149)
+.+.|||++||.+|.+. ...+.++|||||+|||+||+.+|+++||++|||+..+++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~HAE~nai~~a~~~--~~~~~~~~ly~t~~PC~~Ca~~i~~~gI~~V~~~~~~~~~~- 157 (193)
T d1vq2a_ 81 TDRFVLAKEHRSAHSEWSSKNEIHAELNAILFAAEN--GSSIEGATMYVTLSPCPDCAKAIAQSGIKKLVYCETYDKNK- 157 (193)
T ss_dssp --CEEECGGGHHHHHHHHHHHCBCHHHHHHHHHHHH--TCCCTTCEEEEEECCCHHHHHHHHHHTCCEEEEEECCTTCC-
T ss_pred CCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHC--CCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCC-
T ss_conf 110000001344321125789868999999987760--77877754772589967899999851578899972799854-
Q ss_pred ECCHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHC
Q ss_conf 1741344431689999879928218999999899988409
Q gi|255764464|r 110 IENGTQFYTLATCHHSPEIYPGISEQRSRQIIQDFFKERR 149 (149)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~v~~gvl~ee~~~Ll~~ff~~kR 149 (149)
....+++...+ ++|+ .++++|+.+|+++||.+-|
T Consensus 158 -~~~~~~l~~~g----I~v~-~i~~~~~~~l~~~~~~~~~ 191 (193)
T d1vq2a_ 158 -PGWDDILRNAG----IEVF-NVPKKNLNKLNWENINEFC 191 (193)
T ss_dssp -TTTTHHHHHTT----CEEE-ECCGGGCCSSCGGGCCCBC
T ss_pred -HHHHHHHHHCC----CEEE-ECCHHHHHHHHHHHHHHHH
T ss_conf -78999999879----9899-5399999999899999985
No 11
>d2d30a1 c.97.1.1 (A:1-124) mono-domain cytidine deaminase {Bacillus anthracis [TaxId: 1392]}
Probab=98.02 E-value=3.2e-05 Score=49.57 Aligned_cols=91 Identities=18% Similarity=0.250 Sum_probs=64.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHC-CCCCEEEEEE-ECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 985699999999999988757-9980899998-38909998734735448864251134456666414885454116886
Q gi|255764464|r 1 MKKGNVFMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 (149)
Q Consensus 1 M~~d~~~M~~A~~~A~~a~~~-g~~PvGaviv-~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYt 78 (149)
|++.+ .++.|++..++|+.. .+.||||++. ++|+| -.|.|..+.....+.|||..||-++... +........++.
T Consensus 1 m~~~~-L~~~A~~a~~~ayaPyS~f~VGAal~~~~G~i-~~G~NvEn~s~~~~~CAEr~Ai~~a~~~-g~~~~~~i~v~~ 77 (124)
T d2d30a1 1 MNSKQ-LIQEAIEARKQAYVPYSKFQVGAALLTQDGKV-YRGCNVENASYGLCNCAERTALFKAVSE-GDKEFVAIAIVA 77 (124)
T ss_dssp CCHHH-HHHHHHHHHTTCBCTTTCCCEEEEEEETTCCE-EEEECBCCSSGGGCBCHHHHHHHHHHHT-TCCCEEEEEEEE
T ss_pred CCHHH-HHHHHHHHHHCCCCCCCCCCEEEEEEECCCCE-EEEEEECCCCCCCCCCHHHHHHHHHHHC-CCCEEEEEEEEC
T ss_conf 98899-99999999971838866996899999689999-9998632555776548899998988765-873057999982
Q ss_pred CC----CCCHHHHHHHHHCC
Q ss_conf 16----77688989998608
Q gi|255764464|r 79 TL----EPCTMCAAAISLAR 94 (149)
Q Consensus 79 Tl----EPC~MC~~Ai~~ag 94 (149)
.. -||-+|-..|....
T Consensus 78 ~~~~~~~PCG~CRQ~l~E~~ 97 (124)
T d2d30a1 78 DTKRPVPPCGACRQVMVELC 97 (124)
T ss_dssp SCSSCCCCCHHHHHHHHHHS
T ss_pred CCCCCCCCCHHHHHHHHHHC
T ss_conf 78775587357899999856
No 12
>d1alna2 c.97.1.1 (A:151-294) Two-domain cytidine deaminase {Escherichia coli [TaxId: 562]}
Probab=97.86 E-value=1.7e-05 Score=51.13 Aligned_cols=87 Identities=15% Similarity=0.153 Sum_probs=59.5
Q ss_pred CHHHHHHHHHHHHHHHHHCC-CCCEEEEEE-ECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf 56999999999999887579-980899998-3890999873473544886425113445666641488545411688616
Q gi|255764464|r 3 KGNVFMSCALEEAQNAALRN-EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTL 80 (149)
Q Consensus 3 ~d~~~M~~A~~~A~~a~~~g-~~PvGaviv-~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTl 80 (149)
+|+..++.|++.+++|+..- +.||||++. ++|+|. .|.|..+...+++.|||..||.++-.. + .++.+....+..
T Consensus 37 ~~d~L~~~A~~aa~~ayaPYS~~~vGaal~~~~G~i~-~G~nvEnaa~~~slcAE~~Ai~~av~~-G-~~~~~I~~~v~v 113 (144)
T d1alna2 37 TGDALSQAAIAAANRSHMPYSKSPSGVALECKDGRIF-SGSYAENAAFNPTLPPLQGALILLNLK-G-YDYPDIQRAVLA 113 (144)
T ss_dssp CSSHHHHHHHHHHHTCBCTTTCCCEEEEEEETTSCEE-EEECBCCTTSTTCBCHHHHHHHHHHHT-T-CCGGGEEEEEEE
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEE-EEEEEECCCCCCCCCHHHHHHHHHHHC-C-CCCCCEEEEEEE
T ss_conf 8799999999999846298789851589996799999-976311355678855899999999984-9-995687999998
Q ss_pred C----C---CHHHHHHHHH
Q ss_conf 7----7---6889899986
Q gi|255764464|r 81 E----P---CTMCAAAISL 92 (149)
Q Consensus 81 E----P---C~MC~~Ai~~ 92 (149)
| | |.+|-..+..
T Consensus 114 e~~~~~is~~~~~r~~l~~ 132 (144)
T d1alna2 114 EKADAPLIQWDATSATLKA 132 (144)
T ss_dssp ECTTCSSCCHHHHHHHHHH
T ss_pred ECCCCCCCCHHHHHHHHHH
T ss_conf 2799987838999999998
No 13
>d1r5ta_ c.97.1.1 (A:) mono-domain cytidine deaminase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.85 E-value=0.00024 Score=44.31 Aligned_cols=90 Identities=16% Similarity=0.097 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHCC-----CCCEEEEEE-ECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEE-
Q ss_conf 99999999999887579-----980899998-38909998734735448864251134456666414885454116886-
Q gi|255764464|r 6 VFMSCALEEAQNAALRN-----EIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV- 78 (149)
Q Consensus 6 ~~M~~A~~~A~~a~~~g-----~~PvGaviv-~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYt- 78 (149)
.-++..++.|.++.+.. +.||||++. ++|+|.. |.|..+.....+.|||..||-++...-......-..+..
T Consensus 8 ~~~~~L~~~a~~a~~~ayaPYS~f~VGAAl~t~~G~I~~-G~NvEnas~~~~lCAEr~Ai~~a~~~g~~~~~~~~vv~~~ 86 (141)
T d1r5ta_ 8 RQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFT-GANVENASYSNCICAERSAMIQVLMAGHRSGWKCMVICGD 86 (141)
T ss_dssp HHHHHHHHHHHHHGGGCBCTTTCCCEEEEEECTTSCEEE-EECBCCSSGGGCBCHHHHHHHHHHHTTCCSCCCEEEEEES
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEE-EEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEC
T ss_conf 999999999999998182886699478999968998988-8861245555566777889999887068764068998506
Q ss_pred ----CCCCCHHHHHHHHHCCCC
Q ss_conf ----167768898999860888
Q gi|255764464|r 79 ----TLEPCTMCAAAISLARIR 96 (149)
Q Consensus 79 ----TlEPC~MC~~Ai~~agI~ 96 (149)
..-||-+|-..|....-+
T Consensus 87 ~~~~~~sPCG~CRQ~l~E~~~~ 108 (141)
T d1r5ta_ 87 SEDQCVSPCGVCRQFINEFVVK 108 (141)
T ss_dssp CSSSCCCCCHHHHHHHHTTSCT
T ss_pred CCCCCCCCHHHHHHHHHHHCCC
T ss_conf 7777788228799999996689
No 14
>d2fr5a1 c.97.1.1 (A:11-146) mono-domain cytidine deaminase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.76 E-value=0.00013 Score=45.97 Aligned_cols=93 Identities=17% Similarity=0.212 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHC-----CCCCEEEEEEE-CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEC--
Q ss_conf 99999999988757-----99808999983-89099987347354488642511344566664148854541168861--
Q gi|255764464|r 8 MSCALEEAQNAALR-----NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT-- 79 (149)
Q Consensus 8 M~~A~~~A~~a~~~-----g~~PvGaviv~-~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtT-- 79 (149)
++..+++|+++.+. -+.||||++.. +|+|. .|.|.-+.....+-|||..||-++...-. ..+......+.
T Consensus 5 ~~~l~~~A~~a~~~AyaPYS~f~VGAa~~~~dG~i~-~G~NvEnasy~~~iCAEr~Ai~~a~~~g~-~~~~~~~~~~~~~ 82 (136)
T d2fr5a1 5 VQRLLLSSREAKKSAYCPYSRFPVGAALLTGDGRIF-SGCNIENACYPLGVCAERTAIQKAISEGY-KDFRAIAISSDLQ 82 (136)
T ss_dssp HHHHHHHHHHHHTTCBCTTTCCCEEEEEEETTSCEE-EEECBCCSSGGGCBCHHHHHHHHHHHTTC-CCEEEEEEEESCS
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEE-EEEEECCCCCCCCCCHHHEEEEEEECCCC-CCEEEEEEECCCC
T ss_conf 999999999999628488669967899995899899-98740356665663522100023101288-5179998311467
Q ss_pred ---CCCCHHHHHHHHHCCCCEEEEEE
Q ss_conf ---67768898999860888599971
Q gi|255764464|r 80 ---LEPCTMCAAAISLARIRRLYYGA 102 (149)
Q Consensus 80 ---lEPC~MC~~Ai~~agI~rVvyg~ 102 (149)
+-||-+|-..|...+-...|+-.
T Consensus 83 ~~~~~PCG~CRQ~l~E~~~~~~i~~~ 108 (136)
T d2fr5a1 83 EEFISPCGACRQVMREFGTDWAVYMT 108 (136)
T ss_dssp SSCCCCCHHHHHHHHHTCSSCEEEEE
T ss_pred CCCCCCCHHHHHHHHHHCCCCEEEEE
T ss_conf 88878656665899860998569998
No 15
>d1uwza_ c.97.1.1 (A:) mono-domain cytidine deaminase {Bacillus subtilis [TaxId: 1423]}
Probab=97.73 E-value=0.00013 Score=45.78 Aligned_cols=91 Identities=20% Similarity=0.263 Sum_probs=62.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHC-CCCCEEEEEEE-CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEE
Q ss_conf 985699999999999988757-99808999983-8909998734735448864251134456666414885454116886
Q gi|255764464|r 1 MKKGNVFMSCALEEAQNAALR-NEIPVGAVAVL-NNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYV 78 (149)
Q Consensus 1 M~~d~~~M~~A~~~A~~a~~~-g~~PvGaviv~-~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYt 78 (149)
|++.+. ++.|++..++|+.. -+.+|||++.. +|+|. .|.|..+.....+.+||..||-.+... +...+.-..+++
T Consensus 1 m~~~~L-~~~A~~a~~~ayaPyS~f~VGAa~~~~~G~i~-~G~NvEnas~~~~~CAEr~Ai~~a~~~-g~~~~~~i~v~~ 77 (130)
T d1uwza_ 1 MNRQEL-ITEALKARDMAYAPYSKFQVGAALLTKDGKVY-RGCNIENAAYSMCNCAEATALFKAVSE-GDTEFQMLAVAA 77 (130)
T ss_dssp CCHHHH-HHHHHHHHTTCBCTTTCCCEEEEEEETTSCEE-EEECBCCSSGGGCBCHHHHHHHHHHHH-TCCCEEEEEEEE
T ss_pred CCHHHH-HHHHHHHHHHCCCCCCCCCEEEEEEECCCCEE-EEEEECCCCCCCCCCCEEHHHHHHHHH-HHCCEEEEEEEC
T ss_conf 988999-99999999718287569948899996899999-876003456665532000356788886-420122689972
Q ss_pred C----CCCCHHHHHHHHHCC
Q ss_conf 1----677688989998608
Q gi|255764464|r 79 T----LEPCTMCAAAISLAR 94 (149)
Q Consensus 79 T----lEPC~MC~~Ai~~ag 94 (149)
. .-||-+|-..|....
T Consensus 78 ~~~~~~sPCG~CRQ~l~E~~ 97 (130)
T d1uwza_ 78 DTPGPVSPCGACRQVISELC 97 (130)
T ss_dssp SCSSSCCCCHHHHHHHHHHS
T ss_pred CCCCCCCCCHHHHHHHHHHC
T ss_conf 89986676789999999847
No 16
>d1alna1 c.97.1.1 (A:1-150) Two-domain cytidine deaminase {Escherichia coli [TaxId: 562]}
Probab=97.23 E-value=0.00079 Score=41.14 Aligned_cols=67 Identities=24% Similarity=0.297 Sum_probs=47.8
Q ss_pred CCCEEEEEE-ECCEEEEEEECCC--CCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHC
Q ss_conf 980899998-3890999873473--5448864251134456666414885454116886167768898999860
Q gi|255764464|r 23 EIPVGAVAV-LNNKIISRAGNRN--RELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLEPCTMCAAAISLA 93 (149)
Q Consensus 23 ~~PvGaviv-~~g~ii~~g~N~~--~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTlEPC~MC~~Ai~~a 93 (149)
+.+|||++. .+|+| -.|.|.. +.....+-|||..||-.+... +...+ -+++++.-||-+|-..|...
T Consensus 70 ~F~VGAa~~~~~G~i-y~G~NvE~~nas~~~sicAEr~Ai~~a~~~-G~~~i--~~i~v~~sPCG~CRQ~m~E~ 139 (150)
T d1alna1 70 NFNVGAIARGVSGTW-YFGANMEFIGATMQQTVHAEQSAISHAWLS-GEKAL--AAITVNYTPCGHCRQFMNEL 139 (150)
T ss_dssp CCCCEEEEEETTSCE-EEEECBCCTTSCGGGCBCHHHHHHHHHHHT-TCCCE--EEEEESSCCCHHHHHHHTTB
T ss_pred CCCEEEEEEECCCCE-EEEEEECCCCCCCCCCCCHHHHHHHHHHHC-CCCCE--EEEEEECCCCHHHHHHHHHH
T ss_conf 985689999289999-998851146775677778999999999864-89834--69999758976688999996
No 17
>d2z3ga1 c.97.1.1 (A:2-124) Blasticidin-S deaminase {Aspergillus terreus [TaxId: 33178]}
Probab=96.86 E-value=0.0089 Score=34.85 Aligned_cols=86 Identities=15% Similarity=0.161 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHHHC-CCCCEEEEEE-ECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEC--
Q ss_conf 699999999999988757-9980899998-389099987347354488642511344566664148854541168861--
Q gi|255764464|r 4 GNVFMSCALEEAQNAALR-NEIPVGAVAV-LNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVT-- 79 (149)
Q Consensus 4 d~~~M~~A~~~A~~a~~~-g~~PvGaviv-~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtT-- 79 (149)
+...++.|.+. ..++.- .+.+|||++. ++|+|. .|-|..+- ..+.+||..||-++...- ...+....++..
T Consensus 6 ~~~Li~~A~~~-~~~~~~~s~f~VGAa~l~~~G~i~-~G~NvEN~--s~glCAEr~Ai~~a~~~g-~~~i~~i~~v~~~~ 80 (123)
T d2z3ga1 6 ESTLIERATAT-INSIPISEDYSVASAALSSDGRIF-TGVNVYHF--TGGPCAELVVLGTAAAAA-AGNLTCIVAIGNEN 80 (123)
T ss_dssp HHHHHHHHHHH-HHHSCCCSSSCEEEEEEETTSCEE-EEECCCCT--TTCCCHHHHHHHHHHHTT-CCCEEEEEEEETTT
T ss_pred HHHHHHHHHHH-HHCCCCCCCCCEEEEEEECCCCEE-EEECCCCC--CCCCCHHHHHHHHHHHCC-CCCEEEEEEEECCC
T ss_conf 99999999999-744798789877999995899999-98711478--886335515765566508-97448999997689
Q ss_pred ---CCCCHHHHHHHHHCC
Q ss_conf ---677688989998608
Q gi|255764464|r 80 ---LEPCTMCAAAISLAR 94 (149)
Q Consensus 80 ---lEPC~MC~~Ai~~ag 94 (149)
+-||-+|-..|....
T Consensus 81 ~~~~sPCG~CRQ~l~Ef~ 98 (123)
T d2z3ga1 81 RGILSPCGRCRQVLLDLH 98 (123)
T ss_dssp TEEECCCHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHC
T ss_conf 876783088999999968
No 18
>d1zbfa1 c.55.3.1 (A:62-193) BH0863-like Ribonuclease H {Bacillus halodurans [TaxId: 86665]}
Probab=59.32 E-value=1.1 Score=22.32 Aligned_cols=58 Identities=16% Similarity=0.145 Sum_probs=32.7
Q ss_pred HCCCC-C--EEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf 57998-0--89999838909998734735448864251134456666414885454116886167
Q gi|255764464|r 20 LRNEI-P--VGAVAVLNNKIISRAGNRNRELKDVTAHAEILAIRMGCRILSQEILPEVDLYVTLE 81 (149)
Q Consensus 20 ~~g~~-P--vGaviv~~g~ii~~g~N~~~~~~d~t~HAEi~ai~~a~~~~~~~~l~~~tlYtTlE 81 (149)
..|++ | .|+|+..+++.+..+..-...+.| .||+.|+..|.+.+.... ...++||--+
T Consensus 13 ~~GNPGp~g~g~v~~~~~~~~~~sg~~~~~TNN---~aEl~A~i~aL~~~~~~~-~~i~I~tDS~ 73 (132)
T d1zbfa1 13 SQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNN---MGEFLAIVHGLRYLKERN-SRKPIYSNSQ 73 (132)
T ss_dssp ECSSSEEEEEEEEETTTCCEEEECCCEEEECHH---HHHHHHHHHHHHHHHHTT-CCCCEEESCH
T ss_pred CCCCCCHHEEEEEEECCCEEEEEECCCCCCCHH---HHHHHHHHHHHHHHHCCC-CEEEEEECCH
T ss_conf 799995126999997599799997686755459---999999999999863379-6599996539
No 19
>d2hi7b1 a.29.15.1 (B:14-162) Disulfide bond formation protein DsbB {Escherichia coli [TaxId: 562]}
Probab=45.68 E-value=2.5 Score=20.12 Aligned_cols=10 Identities=40% Similarity=1.142 Sum_probs=7.4
Q ss_pred CCCCCHHHHH
Q ss_conf 1677688989
Q gi|255764464|r 79 TLEPCTMCAA 88 (149)
Q Consensus 79 TlEPC~MC~~ 88 (149)
-++||+||.-
T Consensus 24 gl~PC~LCi~ 33 (149)
T d2hi7b1 24 LLKPCVLCIY 33 (149)
T ss_dssp CCCCCSHHHH
T ss_pred CCCCCHHHHH
T ss_conf 8887477999
No 20
>d1nuia2 g.41.3.2 (A:10-63) Zinc-binding domain of primase-helicase {Bacteriophage T7 [TaxId: 10760]}
Probab=22.33 E-value=5.6 Score=18.02 Aligned_cols=12 Identities=25% Similarity=0.863 Sum_probs=9.6
Q ss_pred EEECCCCCHHHH
Q ss_conf 886167768898
Q gi|255764464|r 76 LYVTLEPCTMCA 87 (149)
Q Consensus 76 lYtTlEPC~MC~ 87 (149)
+|+-++||+.|-
T Consensus 1 vFv~H~pCp~Cg 12 (54)
T d1nuia2 1 VFLYHIPCDNCG 12 (54)
T ss_dssp CEEEEECCSSSC
T ss_pred CCCCCCCCCCCC
T ss_conf 902156788888
Done!