HHsearch results for GI: 255764465 and protein with PDBid: 1zcd_A
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A
Probab=100.00 E-value=0 Score=888.41 Aligned_cols=377 Identities=37% Similarity=0.703 Sum_probs=357.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH--HH--CCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 951478985321557999999999999833871243334--31--124335----6769999876799999999999999
Q gi|255764465|r 1 MTKNKFFLYRDNFTGILLISTTFITMILANISFSSAYYF--DA--LEYKIA----NLTLRDWVNDILMILYFFMIGLELK 72 (382)
Q Consensus 1 ~~k~k~F~~~e~~~gilLl~aa~~Al~~ANs~~~~~y~~--~~--~~~~~~----~~~l~~wvNDgLMaiFFf~vGLEiK 72 (382)
|++.|+|+|+|++||++|+.+|++|++||||||.+.||+ ++ .+.+++ ++|+||||||+||++|||+||||+|
T Consensus 1 ~~~l~~f~~~e~~~gilLl~a~~~Ali~ANs~~~~~~Y~~~~~~~~~~~~g~~~~~~~l~~winD~LMalFFflvGLEik 80 (388)
T 1zcd_A 1 MKHLHRFFSSDASGGIILIIAAILAMIMANSGATSGWYHDFLETPVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVK 80 (388)
T ss_dssp --------CCSSHHHHHHHHHHHHHHHHHHCSSSHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 91589998510368999999999999998797045689998606201442752467749999876899999999999998
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 99864867899998999999877889999998982379800035045533773789999999842788899999999999
Q gi|255764465|r 73 HELIHGELSSWTKRSLPLLGAIGGITFPACIYMIINCHTEIYLKGWAIPTATDIAFTLGILSWIGPNIPSSLKIFFTALT 152 (382)
Q Consensus 73 rE~~~GeLs~~r~a~lP~~AAlGGmi~Paliy~~~n~~~~~~~~GWaIP~ATDiAFalgvl~llg~rvp~~lrvFLlaLA 152 (382)
||++.||||++||+++|.+||+|||++|+++|+.+|.++++..+||+|||||||||++++++++|+|+|+++|+||+++|
T Consensus 81 re~l~G~Ls~~~~a~lP~~Aa~GGm~~Pa~iyl~~n~~~~~~~~GWaiP~ATDIAfal~vl~llg~rvp~~lr~fLL~lA 160 (388)
T 1zcd_A 81 RELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALA 160 (388)
T ss_dssp HHHHSTTTSSTTTSHHHHHHHHHHTTTTHHHHGGGCCSSTTHHHHTSSSSCCCHHHHHHHHHSSCSSSCSSSHHHHHHHH
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 99873765637899989999985226999999863147875567750440238999999999974668748999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
Q ss_conf 87544799888864177666799999999999999986259861237899999999999712865678988886317678
Q gi|255764465|r 153 MIDDFSAIAIMAIFYTQSLNLFALQVAITLIFLLFLLNRCGFTNLFIYGFLGFFLWHSIFKSGIHTTVFGVIMALLLPDI 232 (382)
Q Consensus 153 IvDDlgaIlVIAifYs~~i~~~~L~~a~~~~~~l~~l~~~~v~~~~~y~~~g~~lW~~~~~sGIHaTiAGV~l~~~iP~~ 232 (382)
|+||+|+|+|||+|||+++++.|+..+...+..++.+||+++++.++|.++|+++||++++||||||+|||++|+++|++
T Consensus 161 ivDDlgailvIA~fYt~~i~~~~l~~a~~~~~~~~~~~~~~v~~~~~y~~lg~~~W~~~~~sGVHatlagv~~gl~iP~~ 240 (388)
T 1zcd_A 161 IIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGARRTGVYILVGVVLWTAVLKSGVHATLAGVIVGFFIPLK 240 (388)
T ss_dssp HHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHSCCC
T ss_pred HHHCCCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
T ss_conf 98301024211200166335999999999999999998528871008899999999999860555788877876112466
Q ss_pred CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 77789400003788763420443247879998851263246764787310269999999864455899999999996175
Q gi|255764465|r 233 KNYHSPSNRISFYLLGDGLKSWVMPLVLPAFVFVNTGLTISTIPYTDISDPIVWGVMLGLFLGKQSGIFLFAFSTVKIGW 312 (382)
Q Consensus 233 ~~~~~~~~~~~~~~le~~l~p~v~~~IlPlFAfaNaGV~l~~~~~~~~~~pv~~gI~~gL~iGK~lGI~~~s~lavkl~~ 312 (382)
+++ +++|.+|+||.+||||+|+|+|+|||+|+||++++...+..++|+++||++||++|||+||++++|+++|+++
T Consensus 241 ~~~----~~sp~erlE~~l~p~v~~~ilPlFaf~nagv~l~~~~~~~~~~p~~~gI~~gL~vGK~lGI~~~~~la~kl~~ 316 (388)
T 1zcd_A 241 EKH----GRSPAKRLEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKL 316 (388)
T ss_dssp GGG----SSCHHHHHHHHHHHHHHHTHHHHHHHHHCCCCCSSSCCCTHHHHSSTTTTHHHHHTTGGGSTTHHHHTSSCTT
T ss_pred CCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHCCCEEEEEEEEEHHHHHCCC
T ss_conf 556----7985888999867789999988999986031224540343017278777863121658898621189887054
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 4389998999999999987558999999866406872-57887655999999999999999999414778
Q gi|255764465|r 313 GKLPKDTNWCLLYGGSILCGIGFTMSLFLTLQAFPNA-NNLQEKAKIGIILSSVISIIYAYLVFKIPLRK 381 (382)
Q Consensus 313 ~~lP~g~~w~~l~~v~~LaGIGFTmSLfIa~LAF~~~-~~~~~~aKlgIL~~S~~aailG~~~l~~~~~k 381 (382)
+++|++++|+|++++|+||||||||||||+++||++. ++++|++|+|||.+|++|+++|+.++|+++|-
T Consensus 317 ~~lP~g~~~~~l~~v~~LaGIGFTmSLfI~~lAf~~~~~~~~~~aK~giL~~S~~sa~~g~~~l~~~~rp 386 (388)
T 1zcd_A 317 AHLPEGTTYQQIMVVGILCGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRP 386 (388)
T ss_dssp TCCCCSCCGGGGTTHHHHTTCCHHHHHHHHHHHSTTSSCSSHHHHHHHHHHHHHTTTSTTTGGGTTTC--
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 7799999899999999999899999999999866799867771169999999999999999999724689