HHsearch results for GI: 255764465 and protein with PDBid: 1zcd_A

>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A
Probab=100.00  E-value=0  Score=888.41  Aligned_cols=377  Identities=37%  Similarity=0.703  Sum_probs=357.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH--HH--CCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             951478985321557999999999999833871243334--31--124335----6769999876799999999999999
Q gi|255764465|r    1 MTKNKFFLYRDNFTGILLISTTFITMILANISFSSAYYF--DA--LEYKIA----NLTLRDWVNDILMILYFFMIGLELK   72 (382)
Q Consensus         1 ~~k~k~F~~~e~~~gilLl~aa~~Al~~ANs~~~~~y~~--~~--~~~~~~----~~~l~~wvNDgLMaiFFf~vGLEiK   72 (382)
                      |++.|+|+|+|++||++|+.+|++|++||||||.+.||+  ++  .+.+++    ++|+||||||+||++|||+||||+|
T Consensus         1 ~~~l~~f~~~e~~~gilLl~a~~~Ali~ANs~~~~~~Y~~~~~~~~~~~~g~~~~~~~l~~winD~LMalFFflvGLEik   80 (388)
T 1zcd_A            1 MKHLHRFFSSDASGGIILIIAAILAMIMANSGATSGWYHDFLETPVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVK   80 (388)
T ss_dssp             --------CCSSHHHHHHHHHHHHHHHHHHCSSSHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             91589998510368999999999999998797045689998606201442752467749999876899999999999998


Q ss_pred             HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             99864867899998999999877889999998982379800035045533773789999999842788899999999999
Q gi|255764465|r   73 HELIHGELSSWTKRSLPLLGAIGGITFPACIYMIINCHTEIYLKGWAIPTATDIAFTLGILSWIGPNIPSSLKIFFTALT  152 (382)
Q Consensus        73 rE~~~GeLs~~r~a~lP~~AAlGGmi~Paliy~~~n~~~~~~~~GWaIP~ATDiAFalgvl~llg~rvp~~lrvFLlaLA  152 (382)
                      ||++.||||++||+++|.+||+|||++|+++|+.+|.++++..+||+|||||||||++++++++|+|+|+++|+||+++|
T Consensus        81 re~l~G~Ls~~~~a~lP~~Aa~GGm~~Pa~iyl~~n~~~~~~~~GWaiP~ATDIAfal~vl~llg~rvp~~lr~fLL~lA  160 (388)
T 1zcd_A           81 RELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALA  160 (388)
T ss_dssp             HHHHSTTTSSTTTSHHHHHHHHHHTTTTHHHHGGGCCSSTTHHHHTSSSSCCCHHHHHHHHHSSCSSSCSSSHHHHHHHH
T ss_pred             HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf             99873765637899989999985226999999863147875567750440238999999999974668748999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
Q ss_conf             87544799888864177666799999999999999986259861237899999999999712865678988886317678
Q gi|255764465|r  153 MIDDFSAIAIMAIFYTQSLNLFALQVAITLIFLLFLLNRCGFTNLFIYGFLGFFLWHSIFKSGIHTTVFGVIMALLLPDI  232 (382)
Q Consensus       153 IvDDlgaIlVIAifYs~~i~~~~L~~a~~~~~~l~~l~~~~v~~~~~y~~~g~~lW~~~~~sGIHaTiAGV~l~~~iP~~  232 (382)
                      |+||+|+|+|||+|||+++++.|+..+...+..++.+||+++++.++|.++|+++||++++||||||+|||++|+++|++
T Consensus       161 ivDDlgailvIA~fYt~~i~~~~l~~a~~~~~~~~~~~~~~v~~~~~y~~lg~~~W~~~~~sGVHatlagv~~gl~iP~~  240 (388)
T 1zcd_A          161 IIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGARRTGVYILVGVVLWTAVLKSGVHATLAGVIVGFFIPLK  240 (388)
T ss_dssp             HHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHSCCC
T ss_pred             HHHCCCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
T ss_conf             98301024211200166335999999999999999998528871008899999999999860555788877876112466


Q ss_pred             CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             77789400003788763420443247879998851263246764787310269999999864455899999999996175
Q gi|255764465|r  233 KNYHSPSNRISFYLLGDGLKSWVMPLVLPAFVFVNTGLTISTIPYTDISDPIVWGVMLGLFLGKQSGIFLFAFSTVKIGW  312 (382)
Q Consensus       233 ~~~~~~~~~~~~~~le~~l~p~v~~~IlPlFAfaNaGV~l~~~~~~~~~~pv~~gI~~gL~iGK~lGI~~~s~lavkl~~  312 (382)
                      +++    +++|.+|+||.+||||+|+|+|+|||+|+||++++...+..++|+++||++||++|||+||++++|+++|+++
T Consensus       241 ~~~----~~sp~erlE~~l~p~v~~~ilPlFaf~nagv~l~~~~~~~~~~p~~~gI~~gL~vGK~lGI~~~~~la~kl~~  316 (388)
T 1zcd_A          241 EKH----GRSPAKRLEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKL  316 (388)
T ss_dssp             GGG----SSCHHHHHHHHHHHHHHHTHHHHHHHHHCCCCCSSSCCCTHHHHSSTTTTHHHHHTTGGGSTTHHHHTSSCTT
T ss_pred             CCC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHCCCEEEEEEEEEHHHHHCCC
T ss_conf             556----7985888999867789999988999986031224540343017278777863121658898621189887054


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             4389998999999999987558999999866406872-57887655999999999999999999414778
Q gi|255764465|r  313 GKLPKDTNWCLLYGGSILCGIGFTMSLFLTLQAFPNA-NNLQEKAKIGIILSSVISIIYAYLVFKIPLRK  381 (382)
Q Consensus       313 ~~lP~g~~w~~l~~v~~LaGIGFTmSLfIa~LAF~~~-~~~~~~aKlgIL~~S~~aailG~~~l~~~~~k  381 (382)
                      +++|++++|+|++++|+||||||||||||+++||++. ++++|++|+|||.+|++|+++|+.++|+++|-
T Consensus       317 ~~lP~g~~~~~l~~v~~LaGIGFTmSLfI~~lAf~~~~~~~~~~aK~giL~~S~~sa~~g~~~l~~~~rp  386 (388)
T 1zcd_A          317 AHLPEGTTYQQIMVVGILCGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRP  386 (388)
T ss_dssp             TCCCCSCCGGGGTTHHHHTTCCHHHHHHHHHHHSTTSSCSSHHHHHHHHHHHHHTTTSTTTGGGTTTC--
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             7799999899999999999899999999999866799867771169999999999999999999724689