RPSBLAST alignment of GI: 255764465 and protein with PDBid: 1zcd
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A Length = 388
Score = 289 bits (740), Expect = 9e-79
Identities = 145/385 (37%), Positives = 221/385 (57%), Gaps = 15/385 (3%)
Query: 7 FLYRDNFTGILLISTTFITMILANISFSSAYYFDALEYKIA--------NLTLRDWVNDI 58
F D GI+LI + MI+AN +S +Y D LE + N + W+ND
Sbjct: 7 FFSSDASGGIILIIAAILAMIMANSGATSGWYHDFLETPVQLRVGSLEINKNMLLWINDA 66
Query: 59 LMILYFFMIGLELKHELIHGELSSWTKRSLPLLGAIGGITFPACIYMIINCHTEIYLKGW 118
LM ++F ++GLE+K EL+ G L+S + + P++ AIGG+ PA +Y+ N I +GW
Sbjct: 67 LMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAFNYADPITREGW 126
Query: 119 AIPTATDIAFTLGILSWIGPNIPSSLKIFFTALTMIDDFSAIAIMAIFYTQSLNLFALQV 178
AIP ATDIAF LG+L+ +G +P +LKIF AL +IDD AI I+A+FYT L++ +L V
Sbjct: 127 AIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYTNDLSMASLGV 186
Query: 179 AITLIFLLFLLNRCGFTNLFIYGFLGFFLWHSIFKSGIHTTVFGVIMALLLPDIKNY-HS 237
A I +L +LN CG +Y +G LW ++ KSG+H T+ GVI+ +P + + S
Sbjct: 187 AAVAIAVLAVLNLCGARRTGVYILVGVVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRS 246
Query: 238 PSNRISFYLLGDGLKSWVMPLVLPAFVFVNTGLTISTIPYTDISDPIVWGVMLGLFLGKQ 297
P+ R L L WV L+LP F F N G+++ + ++ + G++ GL +GK
Sbjct: 247 PAKR-----LEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGKP 301
Query: 298 SGIFLFAFSTVKIGWGKLPKDTNWCLLYGGSILCGIGFTMSLFLTLQAFPNAN-NLQEKA 356
GI LF + +++ LP+ T + + ILCGIGFTMS+F+ AF + + L A
Sbjct: 302 LGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMSIFIASLAFGSVDPELINWA 361
Query: 357 KIGIILSSVISIIYAYLVFKIPLRK 381
K+GI++ S+ S + Y ++ LR
Sbjct: 362 KLGILVGSISSAVIGYSWLRVRLRP 386