HHsearch alignment for GI: 255764466 and conserved domain: pfam02600
>pfam02600 DsbB Disulfide bond formation protein DsbB. This family consists of disulfide bond formation protein DsbB from bacteria. The DsbB protein oxidizes the periplasmic protein DsbA which in turn oxidizes cysteines in other periplasmic proteins in order to make disulfide bonds. DsbB acts as a redox potential transducer across the cytoplasmic membrane and is an integral membrane protein. DsbB posses six cysteines four of which are necessary for it proper function in vivo.
Probab=100.00 E-value=2.4e-38 Score=249.29 Aligned_cols=154 Identities=25% Similarity=0.377 Sum_probs=135.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 64216999999999999999999999527887055799899999999999999997201111101225999999999999
Q gi|255764466|r 9 LANIPLPRIILLNISGVIVCFLMIQHVGGYPPCDLCIQEQKIYYFGFLIALVADLSTRNHNSYWSTRLLLMTLGLLMFFN 88 (174)
Q Consensus 9 ~~~~~l~li~~l~~~~ll~~A~~~qy~~gl~PC~LCi~QR~py~~~i~i~l~~~l~~~~~~~~~~~~~~~~~~~l~~~~g 88 (174)
T Consensus 5 ~~~r~~~~~~~l~s~~~l~~Al~~q~~~gl~PC~LCi~QR~~~~~~~~~~li~~~~~~----~~~~~~~~~~~~~~~~~G 80 (159)
T pfam02600 5 SSSRLLLLLLALASLALLLGALYFQYVLGLEPCPLCIYQRIAMLALALIGLLALLAGR----RGRRRLALLLALLLALAG 80 (159)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHHH
T ss_conf 0137999999999999999999999983888856599999999999999999998332----048999999999999999
Q ss_pred HHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999986588750001011222234310002658899998428999847100332101468899999999999999999
Q gi|255764466|r 89 MTISVIHVGIECGIWEKNAICMNNSKIESITSTVDLLTQMEQENIPSCNKTTLYVLGLSLAFWNIIVSFFLSFITSIAM 167 (174)
Q Consensus 89 ~~ia~yH~giE~~~~~~~~~C~~~~~~~~~~~~~~l~~~l~~~~~~~C~ev~w~flGlSma~wn~i~~~~l~~i~~~~~ 167 (174)
T Consensus 81 ~~~a~~h~~le~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~-~~~C~~~~~~~lGlSma~wn~i~f~~l~i~~~~~~ 158 (159)
T pfam02600 81 AGIALYHVGLQAGPWEGPPSCGALEGFPDWLPLDEWLPQVFAA-TGDCAEVAWTFLGLSMPGWSLVAFLLLALLLLLLL 158 (159)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC-CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999828757899888864445537899999986689-99857534576584899999999999999999998