BLAST/PSIBLAST alignment of GI: 255764467 and GI: 56698546 at iteration 1
>gi|56698546|ref|YP_168922.1| type I secretion system ATPase [Ruegeria pomeroyi DSS-3] Length = 577
>gi|56680283|gb|AAV96949.1| type I secretion system ATPase [Ruegeria pomeroyi DSS-3] Length = 577
Score = 246 bits (627), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 164/551 (29%), Positives = 270/551 (49%), Gaps = 24/551 (4%)
Query: 25 SFFINILYLTNPLYMMHIYDSVIGTQSKINLIALSTITLFLYALFFGFDLIRSRLLIESS 84
SFF N+L LT PLYM+ +YD V+G++S+ L+ALS + +FLY + D R R++ +
Sbjct: 31 SFFANLLMLTGPLYMLQVYDRVLGSRSEQTLVALSLLVVFLYGVMGILDYTRGRVMSRAG 90
Query: 85 H-----LIERFFKPYII-TVTKKYEMDGTSLFSIISSLDQLKQFITSPVLPALLDILFTP 138
L +R F + + + + T L + L+ +++FI SPV A+ D+ +TP
Sbjct: 91 ARFQEALDQRVFDAMVRRSAVAQDPVAQTGL----ADLESVQRFIASPVAMAIFDLPWTP 146
Query: 139 IFIILSFCIHPILGSWAILSGILLLTITILFQANNERLERRYKKSRQDEINFGKAILHNS 198
IF+ HP LG A+ G+LL+ IT Q + + + G I +
Sbjct: 147 IFLFAIAIFHPWLGLLAVGGGVLLIGITGFNQLFSRKPALNAAIANNRAGKMGDEIRTEA 206
Query: 199 EYIYAPSTRDFLLTYWNKKRATSQEYQSLIAKKYYFGIS-VTKTLRMTLQSSILGIGAWL 257
E I + R W K R TS + L A S +TKTLR+ LQS++LG+GA+L
Sbjct: 207 ETIQSMGMRRAAFDRWRKARVTSLT-EGLTAGDVMGRFSTLTKTLRLFLQSAMLGLGAYL 265
Query: 258 VIHQKLSAGAIIATSIITARAMAPLEQIINSKKSLNVGLKSLKYLINLNDFTTLLNSSDS 317
V+ +L+ GA+IA SI+ RA+AP+E I+N + + LK L + LL +
Sbjct: 266 VLQGELTPGAMIAASILMGRALAPVEMIVNQWQVVQRSLKGWSSL------SELLEKAPP 319
Query: 318 KKEPISMRLSNNTITAKNIVFRDKKTSRLICQNLSFTIPEGSCCIIAGPSGCGKSNFLLC 377
+ + + + + +++ +R + +SFT+ G + GPSG GKS
Sbjct: 320 ENKRMDLPKPKAKLDVQSLTVVPPGDTRAQLKTVSFTVQPGQAIGVIGPSGSGKSTLARA 379
Query: 378 MLGLLTLEKGTISFGDRQISRDFIEKFSAQIGYLSQHCSLFPISITENII-LSHDQNSLH 436
+ G+ GT+ + + + IGYL Q LF +I ENI LS ++
Sbjct: 380 LTGVWRPAGGTVRLDGAALDQYDPDVLGQHIGYLPQRVQLFEGTIAENIARLSGKPDAKK 439
Query: 437 IAQKTAKIVGCHEDILSLKNGYQT--TYCSDEIPYNIVQKIRLSRIIANNPAILLMDEPL 494
+ + K H+ IL L +GY T T + +Q++ L+R + ++P I+++DEP
Sbjct: 440 VVEAATK-AAVHDMILQLPDGYDTHITAGGGRLSGGQMQRVGLARALYDDPVIVILDEPN 498
Query: 495 YHLDNEAKNNFYTLLKQFKENKKTIVIISHDPTIISMSDFSLIF-HPIQGSLFGLTQDIF 553
LDN+ ++ KE K+++I++H P I+ D L+ H ++ + FG +
Sbjct: 499 SSLDNDGSVALNKAIRSLKEAGKSVLIMAHRPAAIAECDMLLVLDHGVRMA-FGPKDQVL 557
Query: 554 KFNTVTHNQIK 564
K H IK
Sbjct: 558 KEMVTNHQVIK 568