RPSBLAST alignment for GI: 255764467 and conserved domain: TIGR01271

>gnl|CDD|162277 TIGR01271, CFTR_protein, cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se. Length = 1490
 Score = 56.1 bits (135), Expect = 3e-08
 Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 25/184 (13%)

Query: 347 ICQNLSFTIPEGSCCIIAGPSGCGKSNFLLCMLGLLTLEKGTISFGDRQISRDFIEKFSA 406
           + +N+SF + +G    +AG +G GKS+ L+ ++G L   +G I             K S 
Sbjct: 441 VLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGELEPSEGKI-------------KHSG 487

Query: 407 QIGYLSQHCSLFPISITENII--LSHDQNSLHIAQKTAKIVGCH--EDILSLKNGYQTTY 462
           +I +  Q   + P +I +NII  LS+D+      + T+ I  C   EDI       +T  
Sbjct: 488 RISFSPQTSWIMPGTIKDNIIFGLSYDE-----YRYTSVIKACQLEEDIALFPEKDKTVL 542

Query: 463 CSDEIPYNIVQKIR--LSRIIANNPAILLMDEPLYHLD-NEAKNNFYTLLKQFKENKKTI 519
               I  +  Q+ R  L+R +  +  + L+D P  HLD    K  F + L +   NK  I
Sbjct: 543 GEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRI 602

Query: 520 VIIS 523
           ++ S
Sbjct: 603 LVTS 606