RPSBLAST alignment for GI: 255764467 and conserved domain: cd03224
>gnl|CDD|72983 cd03224, ABC_TM1139_LivF_branched, LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.. Length = 222
Score = 62.4 bits (152), Expect = 4e-10
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 24/190 (12%)
Query: 347 ICQNLSFTIPEGSCCIIAGPSGCGKSNFLLCMLGLLTLEKGTISFGDRQISR-DFIEKFS 405
I +S T+PEG + G +G GK+ L ++GLL G+I F R I+ E+
Sbjct: 15 ILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERAR 74
Query: 406 AQIGYLSQHCSLFP-ISITENIIL-SHDQNSLHIAQKTAKIVG--------CHEDILSLK 455
A IGY+ + +FP +++ EN++L ++ + + ++ + +L
Sbjct: 75 AGIGYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFPRLKERRKQLAGTLS 134
Query: 456 NGYQTTYCSDEIPYNIVQKIRLSRIIANNPAILLMDEPLYHLDNEAKNNFYTLLKQFKEN 515
G Q Q + ++R + + P +LL+DEP L + + +++ ++
Sbjct: 135 GGEQ-------------QMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDE 181
Query: 516 KKTIVIISHD 525
TI+++ +
Sbjct: 182 GVTILLVEQN 191