HHsearch alignment for GI: 255764469 and conserved domain: pfam03739
>pfam03739 YjgP_YjgQ Predicted permease YjgP/YjgQ family. Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long and contain about 6 transmembrane regions. They are predicted to be permeases although there is no verification of this.
Probab=100.00 E-value=0 Score=410.44 Aligned_cols=344 Identities=19% Similarity=0.304 Sum_probs=310.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999999999999999999999873037999899999999986899999999999999999999987401
Q gi|255764469|r 7 RYFFKYYLKTTLYFLLGAMILVFVIDLNEIQNQMGELPNYSISRGAVLAATRVPLIIQQIIPFITLVVNIVVFFNLNRTS 86 (361)
Q Consensus 7 RYi~k~~l~~f~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lP~~l~~~lP~a~lla~i~~~~~l~~~~ 86 (361)
T Consensus 1 RYi~k~~l~~fl~~~~~~~~l~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~lP~~l~~~lP~s~lia~l~~~~~L~~~~ 79 (353)
T pfam03739 1 RYILREFLKPFLLVLLVLLLLFLLVDLLRLLDLILG-GGLPLADILRLLLLLLPSILELILPLALLLAVLLTLGRLARDS 79 (353)
T ss_pred CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 923899999999999999999999999999999971-8999999999999988999999999999999999999998426
Q ss_pred CHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCHHHHHHC
Q ss_conf 02577661635012332101135899999986414344288999999998530255543233652000112211233200
Q gi|255764469|r 87 ELVISRAIGISIWQLLNPFVVGSILLGIFTVLVINPIATSGEKIGIDLIQQWKDNGDKQKSDIIPWMQISNPQQDIFIGA 166 (361)
Q Consensus 87 El~al~a~GiS~~~i~~p~l~~~~~i~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 166 (361)
T Consensus 80 El~a~~a~GiS~~~i~~p~l~~~~~~~~~~~~~~~~v~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~i 156 (353)
T pfam03739 80 ELTALRAAGISLKRLLRPVLILALLLSLLSFLLSEYLVPYANQKLEQLLAEILSKAPSLLLRPGLFLRDGD---GLIIYV 156 (353)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEECCC---CEEEEE
T ss_conf 48999983899066789999999999999999854030699999999999986066200147980698699---779999
Q ss_pred CCCCCHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCC----CCCCCCCCCEEEECCCCCC-----CCCCCCCCCCCCHHHH
Q ss_conf 001210122000001211112202444420111145----7851111624511232321-----0000000001013577
Q gi|255764469|r 167 KKILPENHIWEDFTSITIDKKNKIIHRKDADLAIIY----NDKVKLKKVVEYQYGRIPI-----DKNSTTLNIPIKMDGF 237 (361)
Q Consensus 167 ~~~~~~~~~~~~v~i~~~~~~~~~~~~i~A~~~~~~----~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 237 (361)
T Consensus 157 ~~~~~~~~~l~~v~i~~~~~-~~~~~~i~A~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 235 (353)
T pfam03739 157 KKVDPDGRLLEGVFIYDFRD-GGLTSVITAKSATLDSDPNGGVWILENGTIYRFDKDGEELSILSFDRYEIDLSLTPKDL 235 (353)
T ss_pred EEECCCCCEEEEEEEEEECC-CCCEEEEEECEEEEEECCCCCEEEEECCEEEEECCCCCCEEEEEEEEEEEECCCCHHHH
T ss_conf 99838998686589998069-98359999681899865999779997559999548997257776113785446887776
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 75320235677899999997533116520457766777653244899999999999750412243137999999999999
Q gi|255764469|r 238 QKFSEQFASRSFYEIIKKMSFSNKSNIFHNYRAETQFYFLIVIPLMLVAMTLIAASVSLEFSRSNQPRIIVAYGIFSGFM 317 (361)
Q Consensus 238 ~~~~~~~~~~s~~~l~~~i~~~~~~~~~~~~~~~~~~~~r~a~Pl~~~~l~lla~~l~~~~~R~~~~~~~i~~~i~~~~~ 317 (361)
T Consensus 236 ~~~~~~~~~ls~~~L~~~i~~~~~-~~~~~~~~~~~~~~r~~~pl~~l~l~ll~~~l~~~~~R~~~-~~~~~~~l~~~~~ 313 (353)
T pfam03739 236 SSLTADPEELSLSELYAYIKRLKA-SGLDVRKYRAELHRRLALPLSCLVLALLALPLGLGSPRSGR-GAGLVLAILLGFL 313 (353)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-HHHHHHHHHHHHH
T ss_conf 441288788778999999999986-67761146999999999899999999999998316766772-6999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999975078379699999999999999999987
Q gi|255764469|r 318 LYTIITIMKSFGKSGILLPVAAALIPVILTISLSILILLQ 357 (361)
Q Consensus 318 ~y~l~~~~~~l~~~g~l~p~~a~w~P~~~~~~~~~~ll~~ 357 (361)
T Consensus 314 y~~l~~~~~~l~~~~~i~p~~a~w~p~~i~~~i~~~l~~r 353 (353)
T pfam03739 314 YYVLLFLGEALGENGVLPPLLAAWLPNLLFLLLGLYLLLR 353 (353)
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999997499019999999999999999999709