HHsearch alignment for GI: 255764470 and conserved domain: TIGR00427
>TIGR00427 TIGR00427 conserved hypothetical protein TIGR00427; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. .
Probab=96.15 E-value=0.13 Score=30.89 Aligned_cols=169 Identities=21% Similarity=0.251 Sum_probs=97.3
Q ss_pred HHHHHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9744399-999998517998999999999999999999999999999999742479998634532224899999999999
Q gi|255764470|r 24 VLGIDNL-IFITLLVEKLPLAQRGKALVFGLTFAMVTRIALLASLSYWIVMLQQPLFFLKGLSFSGRDIVLILGGFFLLF 102 (523)
Q Consensus 24 vLs~DN~-i~iai~~~~Lp~~~r~~a~~~Gl~~A~v~R~~ll~~~~~wi~~l~~pl~~i~~~~~s~~~lill~GG~fLl~ 102 (523)
T Consensus 21 ~nP~G~~PiFi~-LTe~y~~~~R~~i~kkA~I~~~~IL~~f~~fG~-~-------Il~~FGIsIda---friAGGILlf~ 88 (206)
T TIGR00427 21 INPIGNVPIFIS-LTESYTAEEREKIAKKAVISAFVILLIFLLFGD-L-------ILKYFGISIDA---FRIAGGILLFL 88 (206)
T ss_pred HCCCCCCCHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-------HHHHHCCCHHH---HHHHHHHHHHH
T ss_conf 547550232211-488887789999989999999999999998745-7-------88660872789---89988999999
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHH-----CHHHHHHHHHHHHH--
Q ss_conf 986555530257642111122233209999999999999985778999-----998541-----46999999999999--
Q gi|255764470|r 103 KGTIELHERLEGDGFDKKHKFFSPVSWQVIVLQIVILDLVFSLDSVVT-----AIGMVQ-----HFSVMAIAVAVSAL-- 170 (523)
Q Consensus 103 k~~~el~~~~e~~~~~~~~~~~~~~~~~~~v~~I~v~D~vFSlDsVit-----avg~~~-----~~~i~~~a~~isi~-- 170 (523)
T Consensus 89 Ia~dml~gK~~~~~~~k~~E~~e----~~~~dsI~v~PLA~PL~aGPGaIt~~mvl~~~~~~I~~k~~V~l~Ial~~~~~ 164 (206)
T TIGR00427 89 IALDMLSGKESEKKKHKHDEKEE----SKEIDSIAVVPLALPLIAGPGAITATMVLIAKASDIGEKFLVVLAIALVLLIT 164 (206)
T ss_pred HHHHHHHCCCCHHHHCCHHHHHH----HHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999840255045204134786----44654102221245420365169999999970330899999999999999999
Q ss_pred -HHHHHHHHHHHHHHHCCHH---HHHHHHHHHHHHHHHHHHHH
Q ss_conf -9999989999999848528---99999999999999999774
Q gi|255764470|r 171 -MMMAVSQPMIRYISRHTTV---VILCLGFLLMIGFLLIIEGL 209 (523)
Q Consensus 171 -~m~~~s~~i~~~i~~~p~~---~~l~l~fl~~iG~~L~~eg~ 209 (523)
T Consensus 165 ~l~~~~~~~i~~~lg~~Gin~~tRimGL-~L~AiaV~~I~~Gi 206 (206)
T TIGR00427 165 FLLFLYAAFIIRRLGRTGINVITRIMGL-LLAAIAVEFIVTGI 206 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCC
T ss_conf 9999876899988623018899999999-99998888751589