HHsearch alignment for GI: 255764470 and conserved domain: cd02205
>cd02205 CBS_pair The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generali
Probab=98.97 E-value=1e-08 Score=82.66 Aligned_cols=107 Identities=28% Similarity=0.386 Sum_probs=94.1
Q ss_pred EEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCCCCHH----HHHHCCCEEECCCCCHHHH
Q ss_conf 289960899989999999857997888876785527888888887620202466016----8873274352389998999
Q gi|255764470|r 315 EIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEGSMNF----KRSIRKPLVVHENISVLKL 390 (523)
Q Consensus 315 ~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~~~~~----~~lir~~~~Vpe~~~l~~l 390 (523)
T Consensus 2 ~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~-~~~~G~it~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 80 (113)
T cd02205 2 DVVTVSPDDTVAEALRLMLEHGISGLPVVDDD-GRLVGIVTERDLLRALAEGGLDPLVTVGDVMTRDVVTVSPDTSLEEA 80 (113)
T ss_pred CCEEECCCCCHHHHHHHHHHCCCEEEEEECCC-CCEEEEEEHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEECCHHHHH
T ss_conf 97796892989999999998398099999399-95999998899898876315741033045675054689732117799
Q ss_pred HHHHHHCCCEEEEEECCCCCEEEEEEHHHHHH
Q ss_conf 99885038627775228674256525999999
Q gi|255764470|r 391 MERLRKSSQTFVMVLDEYGVLEGMITPANILE 422 (523)
Q Consensus 391 L~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE 422 (523)
T Consensus 81 ~~~~~~~~~~~~~Vvd~~~~~iG~vs~~di~~ 112 (113)
T cd02205 81 AELMLEHGIRRLPVVDDEGRLVGIVTRSDILR 112 (113)
T ss_pred HHHHHHCCCEEEEEEECCCEEEEEEEHHHHHC
T ss_conf 99999849729999966997999998899746