HHsearch alignment for GI: 255764470 and conserved domain: cd04590
>cd04590 CBS_pair_CorC_HlyC_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the CorC_HlyC domain. CorC_HlyC is a transporter associated domain. This small domain is found in Na+/H+ antiporters, in proteins involved in magnesium and cobalt efflux, and in association with some proteins of unknown function. The function of the CorC_HlyC domain is uncertain but it might be involved in modulating transport of ion substrates. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role,
Probab=99.91 E-value=7.9e-24 Score=193.19 Aligned_cols=110 Identities=42% Similarity=0.667 Sum_probs=103.2
Q ss_pred CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCCC-CHHHHHHCCCEEECCCCCHHHHHH
Q ss_conf 0289960899989999999857997888876785527888888887620202466-016887327435238999899999
Q gi|255764470|r 314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEGS-MNFKRSIRKPLVVHENISVLKLME 392 (523)
Q Consensus 314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~~-~~~~~lir~~~~Vpe~~~l~~lL~ 392 (523)
T Consensus 1 ~~v~~i~~~~s~~e~~~~~~~~~~sr~PV~~~~~~~ivGil~~kDll~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~l~ 80 (111)
T cd04590 1 TDIVALDADDTLEEILELIAESGHSRFPVYDGDLDNIIGVVHVKDLLRALAEGEEDLDLRDLLRPPLFVPESTPLDDLLE 80 (111)
T ss_pred CCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEHHHHHHHHCCCCCCCHHHHCCCCEECCHHHHHHHHHH
T ss_conf 96899969999999999999779977999954788778999911445666527876407764044222255665889998
Q ss_pred HHHHCCCEEEEEECCCCCEEEEEEHHHHHHH
Q ss_conf 8850386277752286742565259999998
Q gi|255764470|r 393 RLRKSSQTFVMVLDEYGVLEGMITPANILEA 423 (523)
Q Consensus 393 ~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~ 423 (523)
T Consensus 81 ~~~~~~~~~a~VvDe~G~~~GivT~~DilE~ 111 (111)
T cd04590 81 EMRKERSHMAIVVDEYGGTAGLVTLEDILEE 111 (111)
T ss_pred HHHHCCCEEEEEECCCCCEEEEEEHHHHHCC
T ss_conf 4355496799999699999999980485377