HHsearch alignment for GI: 255764470 and conserved domain: cd04592

>cd04592 CBS_pair_EriC_assoc_euk This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in the EriC CIC-type chloride channels in eukaryotes. These ion channels are proteins with a seemingly simple task of allowing the passive flow of chloride ions across biological membranes. CIC-type chloride channels come from all kingdoms of life, have several gene families, and can be gated by voltage. The members of the CIC-type chloride channel are double-barreled: two proteins forming homodimers at a broad interface formed by four helices from each protein. The two pores are not found at this interface, but are completely contained within each subunit, as deduced from the mutational analyses, unlike many other channels, in which four or five identical or structurally related subunits jointly form one pore. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually
Probab=97.49  E-value=0.0011  Score=46.02  Aligned_cols=97  Identities=11%  Similarity=0.057  Sum_probs=78.1

Q ss_pred             CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCC--CCH---------------------
Q ss_conf             028996089998999999985799788887678552788888888762020246--601---------------------
Q gi|255764470|r  314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEG--SMN---------------------  370 (523)
Q Consensus       314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~--~~~---------------------  370 (523)
T Consensus         1 t~~vtV~p~ttv~EA~~lM~~~~~~~~~VVD~~-~~L~GIvt~gDi~R~~~~~~~~~~~~~~~~~~~~~~~vs~v~t~~~   79 (133)
T cd04592           1 TKYIKVSPTTTLKEALNLMLDEKQSCVLVVDSD-DFLEGILTLGDIQRFLFTNKTTRVQPEDETKQTNTCLVSSVCTKGI   79 (133)
T ss_pred             CCEEEECCCCCHHHHHHHHHHHCCCEEEEECCC-CCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEE
T ss_conf             945998999859999999998188657998389-9789997879999998762356456320001244432334564203


Q ss_pred             -HHHHHCCCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCE
Q ss_conf             -68873274352389998999998850386277752286742
Q gi|255764470|r  371 -FKRSIRKPLVVHENISVLKLMERLRKSSQTFVMVLDEYGVL  411 (523)
Q Consensus       371 -~~~lir~~~~Vpe~~~l~~lL~~fr~~~~~lAiVvDE~G~~  411 (523)
T Consensus        80 ~~~~~~~~~~tv~pd~~l~~a~~lM~~~~i~~LPVV~~~~~~  121 (133)
T cd04592          80 SYGGQECGLWTCTPDTDLTTAKKLMEAKGVKQLPVVKRGVDR  121 (133)
T ss_pred             EECCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCEEECCCCC
T ss_conf             625511003897899999999999998698858767077666