HHsearch alignment for GI: 255764470 and conserved domain: cd04594

>cd04594 CBS_pair_EriC_assoc_archaea This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the EriC CIC-type chloride channels in archaea. These ion channels are proteins with a seemingly simple task of allowing the passive flow of chloride ions across biological membranes. CIC-type chloride channels come from all kingdoms of life, have several gene families, and can be gated by voltage. The members of the CIC-type chloride channel are double-barreled: two proteins forming homodimers at a broad interface formed by four helices from each protein. The two pores are not found at this interface, but are completely contained within each subunit, as deduced from the mutational analyses, unlike many other channels, in which four or five identical or structurally related subunits jointly form one pore. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS do
Probab=99.29  E-value=6e-11  Score=99.04  Aligned_cols=101  Identities=20%  Similarity=0.257  Sum_probs=88.5

Q ss_pred             EEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHCCCEEECCCCCHHHHHHHHHH
Q ss_conf             99608999899999998579978888767855278888888876202024660168873274352389998999998850
Q gi|255764470|r  317 VWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEGSMNFKRSIRKPLVVHENISVLKLMERLRK  396 (523)
Q Consensus       317 ~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~~~~~~~lir~~~~Vpe~~~l~~lL~~fr~  396 (523)
T Consensus         4 VtV~pd~tV~eA~~lM~~~~i~~lPVvd~--~klvGIvt~rDi~~~~~--~~-v~d~Mt~~v~tv~p~~~l~ea~~lM~~   78 (104)
T cd04594           4 IKVKDYDKVYEAKRIMIENDLLSLPVVDY--NKFLGAVYLKDIENATY--GD-VVDYIVRGIPYVRLTSTAEEAWEVMMK   78 (104)
T ss_pred             EEECCCCCHHHHHHHHHHHCCCEEEEEEC--CEEEEEEEHHHHHHCCC--CC-HHHEEECCCEEECCCCCHHHHHHHHHH
T ss_conf             79899993999999999839887889989--99999999799652469--98-445476398889998979999999998


Q ss_pred             CCCEEEEEECCCCCEEEEEEHHHHHHH
Q ss_conf             386277752286742565259999998
Q gi|255764470|r  397 SSQTFVMVLDEYGVLEGMITPANILEA  423 (523)
Q Consensus       397 ~~~~lAiVvDE~G~~~GIVTleDIlE~  423 (523)
T Consensus        79 ~~i~~lPVvd~-gklvGIIT~~Dil~A  104 (104)
T cd04594          79 NKTRWCPVVDD-GKFKGIVTLDSILDA  104 (104)
T ss_pred             CCCCEEEEEEC-CEEEEEEEHHHHHCC
T ss_conf             69787899989-999999996895378