>cd04594 CBS_pair_EriC_assoc_archaea This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with the EriC CIC-type chloride channels in archaea. These ion channels are proteins with a seemingly simple task of allowing the passive flow of chloride ions across biological membranes. CIC-type chloride channels come from all kingdoms of life, have several gene families, and can be gated by voltage. The members of the CIC-type chloride channel are double-barreled: two proteins forming homodimers at a broad interface formed by four helices from each protein. The two pores are not found at this interface, but are completely contained within each subunit, as deduced from the mutational analyses, unlike many other channels, in which four or five identical or structurally related subunits jointly form one pore. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS do

Probab=97.69  E-value=0.00015  Score=52.32  Aligned_cols=57  Identities=16%  Similarity=0.233  Sum_probs=49.7

Q ss_pred             CCEEEEEEEEECCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHH
Q ss_conf             7866746534000289960899989999999857997888876785527888888887620
Q gi|255764470|r  302 ADRPAKSIMTPRTEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRD  362 (523)
Q Consensus       302 ~e~~V~~IMtPR~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~  362 (523)
T Consensus        48 ~~~~v~d~Mt--~~v~tv~p~~~l~ea~~lM~~~~i~~lPVvd~--gklvGIIT~~Dil~A  104 (104)
T cd04594          48 TYGDVVDYIV--RGIPYVRLTSTAEEAWEVMMKNKTRWCPVVDD--GKFKGIVTLDSILDA  104 (104)
T ss_pred             CCCCHHHEEE--CCCEEECCCCCHHHHHHHHHHCCCCEEEEEEC--CEEEEEEEHHHHHCC
T ss_conf             6998445476--39888999897999999999869787899989--999999996895378