HHsearch alignment for GI: 255764470 and conserved domain: cd04598

>cd04598 CBS_pair_GGDEF_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the GGDEF (DiGuanylate-Cyclase (DGC)) domain. The GGDEF domain has been suggested to be homologous to the adenylyl cyclase catalytic domain and is thought to be involved in regulating cell surface adhesiveness in bacteria. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=97.63  E-value=0.00026  Score=50.50  Aligned_cols=85  Identities=21%  Similarity=0.289  Sum_probs=66.0

Q ss_pred             CCCEEECCCCCHHHHHHHHHHC-CCEEEEEECCCCCEEEEEEHHHHHHHHCCCCCCC-CCCCCCEEEECCCEEEEEECCC
Q ss_conf             2743523899989999988503-8627775228674256525999999870664457-8886312883498599870011
Q gi|255764470|r  376 RKPLVVHENISVLKLMERLRKS-SQTFVMVLDEYGVLEGMITPANILEAIAGDFPDE-DDQKLDITVGDDGSLTVDGWID  453 (523)
Q Consensus       376 r~~~~Vpe~~~l~~lL~~fr~~-~~~lAiVvDE~G~~~GIVTleDIlE~IvGei~DE-~d~~~~i~~~~d~~~~v~G~~~  453 (523)
T Consensus         1 rpv~tv~pd~t~~ev~~~f~~~~~i~~lpVvd~-~r~vGiisr~dl~~~~~~~~g~~l~~~~pV~~~M~~~p~~v~~~~~   79 (119)
T cd04598           1 RPAPTVSPDTTVNDVLERFERDPDLSALAVVDD-GRPVGLIMREALMELLSTPYGRALYGKKPVSEVMDPDPLIVEADTP   79 (119)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEC-CEEEEEEEHHHHHHHHCCCCCHHHHCCCCHHHHCCCCCEEECCCCC
T ss_conf             998574999849999999987899676899879-9889999899999987074322330389589971689879989896


Q ss_pred             HHHHHHHH
Q ss_conf             99999982
Q gi|255764470|r  454 VRYASKLF  461 (523)
Q Consensus       454 l~el~~~l  461 (523)
T Consensus        80 i~~~~~~~   87 (119)
T cd04598          80 LEEVSRLA   87 (119)
T ss_pred             HHHHHHHH
T ss_conf             99999999