HHsearch alignment for GI: 255764470 and conserved domain: cd04610
>cd04610 CBS_pair_ParBc_assoc This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains associated with a ParBc (ParB-like nuclease) domain downstream. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=99.40 E-value=4.6e-12 Score=107.20 Aligned_cols=105 Identities=24% Similarity=0.408 Sum_probs=93.5
Q ss_pred CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHH-CCCEEECCCCCHHHHHH
Q ss_conf 02899608999899999998579978888767855278888888876202024660168873-27435238999899999
Q gi|255764470|r 314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEGSMNFKRSI-RKPLVVHENISVLKLME 392 (523)
Q Consensus 314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~~~~~~~li-r~~~~Vpe~~~l~~lL~ 392 (523)
T Consensus 2 kdvvtv~~d~tv~ea~~~m~~~~~~~~pVvd~--~~lvGivt~~Dll~~---~~~~~v~~iM~~~~~tv~~~~~l~~a~~ 76 (107)
T cd04610 2 RDVITVSPDNTVKDVIKLIKETGHDGFPVVDN--GKVVGIVSARDLLGK---DPDETVEEIMSKDLVVAVPEMDIMDAAR 76 (107)
T ss_pred CCCEEECCCCCHHHHHHHHHHHCCCEEEEEEC--CEEEEEEEHHHHCCC---CCCCCHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf 88099899295999999999759978999989--999998876453159---9877267860578601699986999999
Q ss_pred HHHHCCCEEEEEECCCCCEEEEEEHHHHHHH
Q ss_conf 8850386277752286742565259999998
Q gi|255764470|r 393 RLRKSSQTFVMVLDEYGVLEGMITPANILEA 423 (523)
Q Consensus 393 ~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~ 423 (523)
T Consensus 77 ~m~~~~~~~lpVvde~g~lvGiiT~~Dilra 107 (107)
T cd04610 77 VMFRTGISKLPVVDENNNLVGIITNTDVIRS 107 (107)
T ss_pred HHHHHCCCEEEEECCCCEEEEEEEHHHHHCC
T ss_conf 9998299689699239989999994784439