HHsearch alignment for GI: 255764470 and conserved domain: cd04614
>cd04614 CBS_pair_1 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=98.94 E-value=1.3e-08 Score=81.92 Aligned_cols=95 Identities=12% Similarity=0.198 Sum_probs=87.7
Q ss_pred CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHCCCEEECCCCCHHHHHHH
Q ss_conf 02899608999899999998579978888767855278888888876202024660168873274352389998999998
Q gi|255764470|r 314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEGSMNFKRSIRKPLVVHENISVLKLMER 393 (523)
Q Consensus 314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~~~~~~~lir~~~~Vpe~~~l~~lL~~ 393 (523)
T Consensus 1 rdv~tv~~~~~v~~a~~~m~~~~i~~lpVvd~~-g~lvGIiT~rDli~~-------------~~~itv~~~~~v~eaa~l 66 (96)
T cd04614 1 RNVPTVWEETPLPVAVRIMELANVKALPVLDDD-GKLSGIITERDLIAK-------------SEVVTATKRTTVSECAQK 66 (96)
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCC-CEEEEEEECHHHCCC-------------CCCEEECCCCCHHHHHHH
T ss_conf 996390896989999999997299879999899-949999988888257-------------788797998909999999
Q ss_pred HHHCCCEEEEEECCCCCEEEEEEHHHHHH
Q ss_conf 85038627775228674256525999999
Q gi|255764470|r 394 LRKSSQTFVMVLDEYGVLEGMITPANILE 422 (523)
Q Consensus 394 fr~~~~~lAiVvDE~G~~~GIVTleDIlE 422 (523)
T Consensus 67 M~~~~I~~LPVvd~~~~lvGiit~~Dllk 95 (96)
T cd04614 67 MKRNRIEQIPIINGNDKLIGLLRDHDLLK 95 (96)
T ss_pred HHHCCCCEEEEECCCCCEEEEEEHHHCCC
T ss_conf 99859988628989991999988798048