HHsearch alignment for GI: 255764470 and conserved domain: cd04614
>cd04614 CBS_pair_1 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=96.68 E-value=0.003 Score=42.75 Aligned_cols=45 Identities=24% Similarity=0.327 Sum_probs=24.2
Q ss_pred CCCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHH
Q ss_conf 274352389998999998850386277752286742565259999
Q gi|255764470|r 376 RKPLVVHENISVLKLMERLRKSSQTFVMVLDEYGVLEGMITPANI 420 (523)
Q Consensus 376 r~~~~Vpe~~~l~~lL~~fr~~~~~lAiVvDE~G~~~GIVTleDI 420 (523)
T Consensus 1 rdv~tv~~~~~v~~a~~~m~~~~i~~lpVvd~~g~lvGIiT~rDl 45 (96)
T cd04614 1 RNVPTVWEETPLPVAVRIMELANVKALPVLDDDGKLSGIITERDL 45 (96)
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEECHHH
T ss_conf 996390896989999999997299879999899949999988888