HHsearch alignment for GI: 255764470 and conserved domain: cd04615
>cd04615 CBS_pair_2 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=97.68 E-value=0.00032 Score=49.86 Aligned_cols=50 Identities=24% Similarity=0.293 Sum_probs=39.0
Q ss_pred CCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHHHCC
Q ss_conf 74352389998999998850386277752286742565259999998706
Q gi|255764470|r 377 KPLVVHENISVLKLMERLRKSSQTFVMVLDEYGVLEGMITPANILEAIAG 426 (523)
Q Consensus 377 ~~~~Vpe~~~l~~lL~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~IvG 426 (523)
T Consensus 2 ~P~tv~~d~~l~~A~~~m~~~~~~~~pVvd~~~~lvGivT~~Di~~~~~~ 51 (113)
T cd04615 2 KPSCVVLNTDIARAVAEMYTSGSRALPVVDDKKRLVGIITRYDVLSYALE 51 (113)
T ss_pred CCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEEEHHHHHHHHHH
T ss_conf 59598996999999999997399789999489979999995999999980