HHsearch alignment for GI: 255764470 and conserved domain: cd04621
>cd04621 CBS_pair_8 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=97.67 E-value=6.6e-05 Score=54.86 Aligned_cols=60 Identities=28% Similarity=0.353 Sum_probs=44.3
Q ss_pred HHCCCCEEEEEEEEECCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHH
Q ss_conf 5113786674653400028996089998999999985799788887678552788888888762
Q gi|255764470|r 298 VLTLADRPAKSIMTPRTEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLR 361 (523)
Q Consensus 298 vL~L~e~~V~~IMtPR~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~ 361 (523)
T Consensus 75 ~~~~~~~~v~diMt--~~vitv~~d~~l~~a~~~M~~~~i~~lPVvd~--~~lvGiIt~~Dilr 134 (135)
T cd04621 75 YVKEVPLVAEDIMT--EEIITVSPNDDVVDAAKLMLEANISGLPVVDN--DNIVGVITKTDICR 134 (135)
T ss_pred HCCCCCCCHHHHCC--CCCEEECCCCCHHHHHHHHHHCCCCEEEEEEC--CEEEEEEEHHHHCC
T ss_conf 01446889989388--99889989893999999999719988999989--99999998588116