HHsearch alignment for GI: 255764470 and conserved domain: cd04622
>cd04622 CBS_pair_9 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=99.24 E-value=1.8e-10 Score=95.50 Aligned_cols=108 Identities=21% Similarity=0.329 Sum_probs=93.3
Q ss_pred CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHH-HHHHCCC---CCHHHHHH-CCCEEECCCCCHH
Q ss_conf 02899608999899999998579978888767855278888888876-2020246---60168873-2743523899989
Q gi|255764470|r 314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLL-RDLLEEG---SMNFKRSI-RKPLVVHENISVL 388 (523)
Q Consensus 314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl-~~~~~~~---~~~~~~li-r~~~~Vpe~~~l~ 388 (523)
T Consensus 1 r~~vti~~~~tl~~a~~~m~~~~~~~v~V~d~--~~~vGiiT~~Di~~~~~~~~~~~~~~~v~~iM~~~~i~v~~~~~l~ 78 (113)
T cd04622 1 RDVVTVSPDDTIREAARLMREHDVGALPVCEN--DRLVGIVTDRDIVVRAVAEGRDPDTTTVGDVMTRGVVTVTEDDDVD 78 (113)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCCEEEEEEC--CEEEEEEECHHHHHHHHHCCCCHHHCCHHHHHCCCCEEEECCCCHH
T ss_conf 99779689398999999999729988999989--9999999632788999973998200776786415767998899879
Q ss_pred HHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHH
Q ss_conf 99998850386277752286742565259999998
Q gi|255764470|r 389 KLMERLRKSSQTFVMVLDEYGVLEGMITPANILEA 423 (523)
Q Consensus 389 ~lL~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~ 423 (523)
T Consensus 79 ~a~~~m~~~~i~~lpVvd~~~~~vGiIt~~Dilra 113 (113)
T cd04622 79 EAARLMREHQVRRLPVVDDDGRLVGIVSLGDLARA 113 (113)
T ss_pred HHHHHHHHCCCCEEEEEECCCEEEEEEEHHHHHCC
T ss_conf 99999985796589999089989999997995477