HHsearch alignment for GI: 255764470 and conserved domain: cd04625
>cd04625 CBS_pair_12 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=97.86 E-value=4e-05 Score=56.45 Aligned_cols=60 Identities=18% Similarity=0.340 Sum_probs=51.1
Q ss_pred HCCCCEEEEEEEEECCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHH
Q ss_conf 1137866746534000289960899989999999857997888876785527888888887620
Q gi|255764470|r 299 LTLADRPAKSIMTPRTEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRD 362 (523)
Q Consensus 299 L~L~e~~V~~IMtPR~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~ 362 (523)
T Consensus 53 ~~~~~~~V~~iMt--~~~~tv~~~~~i~~a~~~M~~~~i~~lpVvd~--g~lvGiit~~Di~rA 112 (112)
T cd04625 53 AGVLDTTVRAIMN--PEPIVASPDDSIDEVRRLMVERHLRYLPVLDG--GTLLGVISFHDVAKA 112 (112)
T ss_pred CCCCCCCHHHHEE--CCCEEECCCCHHHHHHHHHHHCCCEEEEEEEC--CEEEEEEEHHHHHCC
T ss_conf 9801170888334--89779989996999999768669769999999--999999997996359