HHsearch alignment for GI: 255764470 and conserved domain: cd04626
>cd04626 CBS_pair_13 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.14 E-value=1.1e-09 Score=89.70 Aligned_cols=107 Identities=18% Similarity=0.254 Sum_probs=93.0
Q ss_pred CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCC--CCHHHHH-HCCCEEECCCCCHHHH
Q ss_conf 028996089998999999985799788887678552788888888762020246--6016887-3274352389998999
Q gi|255764470|r 314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEG--SMNFKRS-IRKPLVVHENISVLKL 390 (523)
Q Consensus 314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~--~~~~~~l-ir~~~~Vpe~~~l~~l 390 (523)
T Consensus 1 tdv~tv~~~~tl~eA~~~m~~~~~~~~~Vvd~~-~~l~GIiT~~Di~~~~~~~~~~~~~V~~iMt~~~itv~~~~~~~~a 79 (111)
T cd04626 1 TDFPTIDEDASIREALHEMLKYNTNEIIVKDNE-EKLKGVVTFTDILDLDLFESFLEKKVFNIVSQDVFYVNEEDTIDEA 79 (111)
T ss_pred CCCEEECCCCCHHHHHHHHHHHCCCEEEEECCC-CEEEEEEEHHHHHHHHHCCCCCCCCHHHHCCCCCEEECCCCCHHHH
T ss_conf 997399962939999999998499889999699-9799999949999998526877888899606998799997939999
Q ss_pred HHHHHHCCCEEEEEECCCCCEEEEEEHHHHHH
Q ss_conf 99885038627775228674256525999999
Q gi|255764470|r 391 MERLRKSSQTFVMVLDEYGVLEGMITPANILE 422 (523)
Q Consensus 391 L~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE 422 (523)
T Consensus 80 ~~~M~~~~i~~LPVvd~-~klvGiit~~Dil~ 110 (111)
T cd04626 80 LDIMREKQIGRLPVVDD-NKLIGVVRTKDILD 110 (111)
T ss_pred HHHHHHHCCCEEEEEEC-CEEEEEEEHHHHCC
T ss_conf 99999809988999999-99999999698148