HHsearch alignment for GI: 255764470 and conserved domain: cd04627

>cd04627 CBS_pair_14 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=97.53  E-value=0.00084  Score=46.78  Aligned_cols=86  Identities=16%  Similarity=0.196  Sum_probs=58.0

Q ss_pred             CCCEEECCCCCHHHHHHHHHHCCCEEEEEECC-CCCEEEEEEHHHHHHHHCCCCCCCCCC----CCCEEE---ECCCEEE
Q ss_conf             27435238999899999885038627775228-674256525999999870664457888----631288---3498599
Q gi|255764470|r  376 RKPLVVHENISVLKLMERLRKSSQTFVMVLDE-YGVLEGMITPANILEAIAGDFPDEDDQ----KLDITV---GDDGSLT  447 (523)
Q Consensus       376 r~~~~Vpe~~~l~~lL~~fr~~~~~lAiVvDE-~G~~~GIVTleDIlE~IvGei~DE~d~----~~~i~~---~~d~~~~  447 (523)
T Consensus         1 ~Pfi~v~~~~sl~~a~~lm~~~~i~rlpVvd~~~g~lvGIiT~~dil~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~vit   80 (123)
T cd04627           1 EPFIPVPSTASLFQAIEILGSGGIHRVAVTEEESGEVIGILSQRRLVEFLWENARSFPGLDPLYPIPLRDLTIGTSDVIS   80 (123)
T ss_pred             CCCEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHCCCCCCEE
T ss_conf             99648489892999999997499777999958999499999979999999863765661445411200233237677179


Q ss_pred             EEECCCHHHHHHHH
Q ss_conf             87001199999982
Q gi|255764470|r  448 VDGWIDVRYASKLF  461 (523)
Q Consensus       448 v~G~~~l~el~~~l  461 (523)
T Consensus        81 i~~d~~l~~A~~lM   94 (123)
T cd04627          81 INGDQPLIDALHLM   94 (123)
T ss_pred             ECCCCCHHHHHHHH
T ss_conf             89999599999999