HHsearch alignment for GI: 255764470 and conserved domain: cd04629
>cd04629 CBS_pair_16 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=98.00 E-value=4.6e-05 Score=56.01 Aligned_cols=52 Identities=27% Similarity=0.411 Sum_probs=35.8
Q ss_pred CCCEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHHHCCC
Q ss_conf 2743523899989999988503862777522867425652599999987066
Q gi|255764470|r 376 RKPLVVHENISVLKLMERLRKSSQTFVMVLDEYGVLEGMITPANILEAIAGD 427 (523)
Q Consensus 376 r~~~~Vpe~~~l~~lL~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~IvGe 427 (523)
T Consensus 1 r~pvtv~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGiit~~Dll~~~~~~ 52 (114)
T cd04629 1 RNPVTFTPDMSVTEAVEKLLKSKISGGPVVDDNGNLVGFLSEQDCLKQLLES 52 (114)
T ss_pred CCCEEECCCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEEEHHHHHHHHHHH
T ss_conf 9899979929999999999971997899994899299999678999999775