HHsearch alignment for GI: 255764470 and conserved domain: cd04631
>cd04631 CBS_pair_18 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.42 E-value=5e-12 Score=106.93 Aligned_cols=110 Identities=20% Similarity=0.288 Sum_probs=94.8
Q ss_pred CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCC--------------CCHHHHH-HCCC
Q ss_conf 028996089998999999985799788887678552788888888762020246--------------6016887-3274
Q gi|255764470|r 314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEG--------------SMNFKRS-IRKP 378 (523)
Q Consensus 314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~--------------~~~~~~l-ir~~ 378 (523)
T Consensus 1 r~vvtv~~~~tl~ea~~~m~~~~v~~~PVvd~~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~v 80 (125)
T cd04631 1 KDVVTVPPTTPIMEAAKIMVRNGFRRLPVVDEGTGKLVGIITATDILKYLGGGEKFNKIKTGNGLEAINEPVRSIMTRNV 80 (125)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCHHHHCCCHHHCCCCHHHHCCCCC
T ss_conf 99779799094999999999839988999979999599999999999987335431012101102321789999566898
Q ss_pred EEECCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHHH
Q ss_conf 352389998999998850386277752286742565259999998
Q gi|255764470|r 379 LVVHENISVLKLMERLRKSSQTFVMVLDEYGVLEGMITPANILEA 423 (523)
Q Consensus 379 ~~Vpe~~~l~~lL~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE~ 423 (523)
T Consensus 81 ~tv~~~~~l~~a~~~m~~~~i~~lpVvd~~g~~~GiIt~~DilrA 125 (125)
T cd04631 81 ITITPDDSIKDAAELMLEKRVGGLPVVDDDGKLVGIVTERDLLKA 125 (125)
T ss_pred EEECCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEEHHHHHCC
T ss_conf 899799998999999986395099999589939999988997369