HHsearch alignment for GI: 255764470 and conserved domain: cd04634
>cd04634 CBS_pair_21 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=97.44 E-value=0.00029 Score=50.20 Aligned_cols=57 Identities=21% Similarity=0.375 Sum_probs=34.7
Q ss_pred CCCCEEEEEEEEECCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHH
Q ss_conf 1378667465340002899608999899999998579978888767855278888888876
Q gi|255764470|r 300 TLADRPAKSIMTPRTEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLL 360 (523)
Q Consensus 300 ~L~e~~V~~IMtPR~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl 360 (523)
T Consensus 85 ~~~~~~v~diM~--~~~itv~~~~~l~~a~~~m~~~~i~~lPVvd~--~~lvGIItr~Dil 141 (143)
T cd04634 85 DAGKMKVRDIMT--KKVITISPDASIEDAAELMVRHKIKRLPVVED--GRLVGIVTRGDII 141 (143)
T ss_pred HHCCCCHHHHCC--CCCEEECCCCCHHHHHHHHHHCCCCEEEEEEC--CEEEEEEEHHHCC
T ss_conf 322789899588--89879989896999999999739888999989--9999999957730