HHsearch alignment for GI: 255764470 and conserved domain: cd04637
>cd04637 CBS_pair_24 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=99.18 E-value=8.6e-10 Score=90.58 Aligned_cols=107 Identities=22% Similarity=0.314 Sum_probs=92.6
Q ss_pred CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCC-------------CCHHHHHH-CCCE
Q ss_conf 028996089998999999985799788887678552788888888762020246-------------60168873-2743
Q gi|255764470|r 314 TEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRDLLEEG-------------SMNFKRSI-RKPL 379 (523)
Q Consensus 314 ~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~~~~~~-------------~~~~~~li-r~~~ 379 (523)
T Consensus 1 T~viTv~p~~tl~~a~~~m~~~~i~~lpVvd~--~~lvGivT~~Di~~~~~~~~~~~~~~~~~~~~~~~~v~~iM~~~~i 78 (122)
T cd04637 1 TRVVTVEMDDRLEEVREIFEKHKFHHLLVVED--NELVGVISDRDYLKAISPFLGTAGETEKDLATLNRRAHQIMTRDPI 78 (122)
T ss_pred CCCEEECCCCCHHHHHHHHHHCCCCEEEEEEC--CEEEEEEEHHHHHHHHHHCCCCCHHHHCCCHHHCCCHHHHCCCCCE
T ss_conf 97499889696999999998749988999989--9999998889999875002453102211212306899994638983
Q ss_pred EECCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEHHHHHH
Q ss_conf 5238999899999885038627775228674256525999999
Q gi|255764470|r 380 VVHENISVLKLMERLRKSSQTFVMVLDEYGVLEGMITPANILE 422 (523)
Q Consensus 380 ~Vpe~~~l~~lL~~fr~~~~~lAiVvDE~G~~~GIVTleDIlE 422 (523)
T Consensus 79 tv~~~~~l~~a~~~m~~~~i~~lPVvd~~~~lvGiIT~~Diik 121 (122)
T cd04637 79 TVSPDTPVDEASKLLLENSISCLPVVDENGQLIGIITWKDLLK 121 (122)
T ss_pred EECCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEEEHHHHHC
T ss_conf 9999984999999999749308999968998999999688327