HHsearch alignment for GI: 255764470 and conserved domain: cd04638
>cd04638 CBS_pair_25 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic gener
Probab=97.62 E-value=0.00013 Score=52.71 Aligned_cols=57 Identities=19% Similarity=0.281 Sum_probs=38.1
Q ss_pred CCEEEEEEEEECCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEHHHHHHH
Q ss_conf 7866746534000289960899989999999857997888876785527888888887620
Q gi|255764470|r 302 ADRPAKSIMTPRTEIVWLDVNCVDEDLQWKILELGHSRFPVAQGSLDSFIGIVSARDLLRD 362 (523)
Q Consensus 302 ~e~~V~~IMtPR~~i~~ld~~~s~~e~~~~i~~~~~SR~PV~~~~~D~iiGiv~~kDLl~~ 362 (523)
T Consensus 50 ~~~~v~~iMt--~~~~tv~~~~~~~~a~~~m~~~~i~~lpVvd~--~~lvGiIt~~DilkA 106 (106)
T cd04638 50 EEEQLALLMT--RDPPTVSPDDDVKEAAKLMVENNIRRVPVVDD--GKLVGIVTVADIVRA 106 (106)
T ss_pred CCCHHHHHHC--CCCEECCCCCCHHHHHHHHHHCCCCEEEEEEC--CEEEEEEEHHHHHCC
T ss_conf 5024467535--89736799491999999998769759999999--999999997995359