HHsearch alignment for GI: 255764470 and conserved domain: cd04801
>cd04801 CBS_pair_M50_like This cd contains two tandem repeats of the cystathionine beta-synthase (CBS pair) domains in association with the metalloprotease peptidase M50. CBS is a small domain originally identified in cystathionine beta-synthase and subsequently found in a wide range of different proteins. CBS domains usually come in tandem repeats, which associate to form a so-called Bateman domain or a CBS pair which is reflected in this model. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown.
Probab=97.60 E-value=0.00057 Score=48.02 Aligned_cols=84 Identities=17% Similarity=0.188 Sum_probs=48.1
Q ss_pred CCCEEECCCCCHHHHHHHH-HHCCCEEEEEECCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCH
Q ss_conf 2743523899989999988-503862777522867425652599999987066445788863128834985998700119
Q gi|255764470|r 376 RKPLVVHENISVLKLMERL-RKSSQTFVMVLDEYGVLEGMITPANILEAIAGDFPDEDDQKLDITVGDDGSLTVDGWIDV 454 (523)
Q Consensus 376 r~~~~Vpe~~~l~~lL~~f-r~~~~~lAiVvDE~G~~~GIVTleDIlE~IvGei~DE~d~~~~i~~~~d~~~~v~G~~~l 454 (523)
T Consensus 1 Rdv~tv~~~~tl~e~~~~~~~~~~~~~~pVvd~~g~l~Givt~~dl~~~~~~~~~~--~~v~~v~~~~~~~~~v~~~~~l 78 (114)
T cd04801 1 RDFPTVPAHLTLREFVREYVLGSNQRRFVVVDNEGRYVGIISLADLRAIPTSQWAQ--TTVIQVMTPAAKLVTVLSEESL 78 (114)
T ss_pred CCCEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEHHHHHHHHHHCCCC--CCHHHHCCCCCCCEEECCCCCH
T ss_conf 99558499995999999998507966899987899799999999987545402568--8477821027787589999979
Q ss_pred HHHHHHH
Q ss_conf 9999982
Q gi|255764470|r 455 RYASKLF 461 (523)
Q Consensus 455 ~el~~~l 461 (523)
T Consensus 79 ~~al~~m 85 (114)
T cd04801 79 AEVLKLL 85 (114)
T ss_pred HHHHHHH
T ss_conf 9999999